BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035749
(405 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 305 bits (782), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/400 (39%), Positives = 240/400 (60%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ A GC+P++ TY T++NGLC+ G +AL+L ++M G E D V
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVV 256
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IYTTIID LC V+ A L +M +K I P+VVTYNS+IR C ++A RL +M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVVTFS ++D K GK+ EA +L + MI+ + P+ F Y++L++GFC+ R+
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ AK +F M S C NV +Y+ LI G+CK K +E + L+ EM +G+ VTYNTL
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GLF+ + A K+F +M GV D Y +DGLCK G + +AL +F L+ K
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
E DI +Y+ +I+G+CK+G+++ W+LF SL + +V+ Y MI C G ++A
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF +M+ G P+ +NTL+ +R+ + + EL+ M
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 260 bits (664), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 223/402 (55%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ +PN +T++TLI+GL A+ L + M+ C+PD
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG------CQPDLF 221
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T+++GLCK G +D A LL +M+ I DVV Y ++I C + N+A LF EM
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G++PNVVT++ ++ LC G+ +AS+LL MI+ + PN ++ L+D F G++
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A++L+ M ++F+YS LING+C + ++ A ++ M+SK P VVTYNTL
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +VE +LF EM + G+ +T Y T I GL + G A ++F+ +
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
DI +YS L+DGLCK G+L+ A +F L + + D+ TYNIMI +C GK++ D
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV P+ + + T++ G R + L M E
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 196/378 (51%), Gaps = 6/378 (1%)
Query: 18 NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
++ +Y+ LIN CR +AL + +M+ E PD V +++++G C +
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYE------PDIVTLSSLLNGYCHGKRIS 167
Query: 78 KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
+A L+ QM P+ VT+N++I G N ++EA L M+ +G QP++ T+ ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
+ LCK G ++ A LL+ M + + + +Y T++D C VN A LF M++ G +
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
NV +Y+ LI C A L S+M+ + I P VVT++ L + ++ A KL
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
+DEM + + D + Y + I+G C + + EA +F + C ++ +Y+ LI G CK
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
+ R++ ELF + + L+ + VTYN +I L G D A +F M + GV PD +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 378 FNTLMLGCIRNNETSKVV 395
++ L+ G + + K +
Sbjct: 468 YSILLDGLCKYGKLEKAL 485
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 201/400 (50%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A LF ++ P+++ ++ L++ + + + ++L E M N + D
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------DLY 116
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +I+ C+ + A +L +M PD+VT +S++ G+C+ +EA L +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
QPN VTF+ ++ L + K EA L++ M+ G +P+ F Y T+++G C G +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A L ME + +V Y+ +I+ C K + AL+L++EM +KGI+P VVTYN+L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
L + A +L +M + + + ID K G +VEA +L+ +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ DI +YS LI+G C RL A +F + +VVTYN +I C ++++ +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF +M +G+ + V +NTL+ G + + ++ +M
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 171/324 (52%), Gaps = 7/324 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A+ L + + PNV+T+S LI+ + G + A L++EMI + PD
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIF 361
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+++I+G C +D+AK + M K+ P+VVTYN++I+GFC A E LF EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G+ N VT++ ++ L + G + A ++ + M+ GV P+ Y+ L+DG C G++
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+A +F ++ + ++++Y+I+I G CK ++E L+ + KG+KP V+ Y T+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G E A LF EM+ G ++ Y T I ++G + EL + +R
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW 325
D + S +I+ L GRL+ ++
Sbjct: 602 VGDASTISMVINML-HDGRLEKSY 624
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 156/290 (53%), Gaps = 10/290 (3%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L+ ++ +P++ TYS+LING C A ++FE MI+ + C P+
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 395
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I G CK V++ EL +M + + + VTYN++I+G A D + A+++F +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV P+++T+S+++D LCK GK+E+A + E + + + P+ + YN +++G C G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V +LF S+ G K NV Y+ +I+G+C+ E A +L+ EM G P TYNT
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
L + +L EM+ G D I DG + Y+
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 181/367 (49%), Gaps = 6/367 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
A++LF EM+ P V + ++ + K D L +M++ I+ D+ +
Sbjct: 64 AVDLFGEMVQSRP------LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
YN +I FC + A + +MM G +P++VT S +++ C ++ EA L++ M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+ +PN +NTL+ G L + + A L M + GC+ ++F+Y ++NG CK +I+
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
ALSL +M I+ VV Y T+ L V A LF EM G+ + Y + I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
LC G +A L + K ++ ++S LID K G+L A +L+ + + +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
D+ TY+ +I+ C ++D+A +F M +K P+ V +NTL+ G + + +EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 398 LHRMDER 404
M +R
Sbjct: 418 FREMSQR 424
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 147/294 (50%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
++A LF EM+ P++V F+ ++ + K K + L E M + + + + YN L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC ++ A + M +G + ++ + S L+NGYC K I A++L +M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
+P VT+NTL GLF ++ A L D M G D + Y T ++GLCK G I AL
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
L + + K E D+ Y+ +ID LC + A LF + + +VVTYN +I LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
G+ A L DM + + P+ V F+ L+ ++ + + +L M +R+
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 133/260 (51%)
Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
K+++A L M+Q P+ +N L+ + + L M+++ ++++SY+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
ILIN +C+ ++ AL++ +M+ G +P +VT ++L G ++ A L D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
+T + T I GL + EA+ L + C+ D+ +Y +++GLCK G + +A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
L + +G + ADVV Y +I ALC ++ A +LF +M+ KG+ P+ V +N+L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 385 CIRNNETSKVVELLHRMDER 404
S LL M ER
Sbjct: 300 LCNYGRWSDASRLLSDMIER 319
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 304 bits (779), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 238/400 (59%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ GC+P+++TY +INGLC+ G +ALNL +M G E D V
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE------ADVV 241
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IY+T+ID LCK VD A L +M +K I PDV TY+S+I C ++A RL +M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVVTF+ ++D K GK+ EA +L + MIQ + PN YN+L++GFC+ R+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A+++F M S C +V +Y+ LING+CK K++ + L+ +M +G+ VTY TL
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G F+ + A +F +M GV + Y T +DGLCKNG + +A+ +F L+ K
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
E DI +Y+ + +G+CK+G+++ W+LF SL + DV+ YN MI C G ++A+
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF+ M+ G PD +NTL+ +R+ + + EL+ M
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 223/402 (55%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ G +P+ +T++TL++GL + A+ L E M+ C+PD V
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLV 206
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +I+GLCK G D A LL +M+ I DVV Y++VI C ++A LF EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G++P+V T+S ++ LC G+ +AS+LL M++ + PN +N+L+D F G++
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A++LF M N+ +Y+ LING+C + ++ A +++ M+SK P VVTYNTL
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +V +LF +M R G+ +T Y T I G + A +F+ +
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+I +Y+ L+DGLCK+G+L+ A +F L + + D+ TYNIM +C GK++ D
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV PD +A+NT++ G + + L +M E
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 208 bits (530), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 203/388 (52%), Gaps = 8/388 (2%)
Query: 9 KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVCKPDAVIYTTII 67
K++ G N+ TY+ +IN LCR AL + +M+ G G P V +++
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYG-------PSIVTLNSLL 142
Query: 68 DGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
+G C + +A L+ QM + PD VT+ +++ G N ++EA L M+ +G Q
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
P++VT+ +++ LCK G+ + A LL M + + + +Y+T++D C V+ A L
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
F M++ G + +VF+YS LI+ C A L S+ML + I P VVT+N+L +
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
++ A KLFDEM + + + Y + I+G C + + EA ++F + C D+ +
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
Y+ LI+G CK+ ++ ELF + R L+ + VTY +IH D A +F M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVV 395
+ GV P+ + +NTL+ G +N + K +
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 169/320 (52%), Gaps = 7/320 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A+ L + + PNV+T+++LI+ + G I A LF+EMI + P+ V
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS------IDPNIV 346
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y ++I+G C +D+A+++ M K+ PDVVTYN++I GFC A + LF +M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G+ N VT++ ++ + + A + + M+ GV PN YNTL+DG C G++
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+A +F ++ + ++++Y+I+ G CK ++E L+ + KG+KP V+ YNT+
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + E A+ LF +M+ G D+ Y T I ++G + EL + +R +
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 302 ELDIRSYSCLIDGLCKSGRL 321
D +Y + D L GRL
Sbjct: 587 AGDASTYGLVTDML-HDGRL 605
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 149/280 (53%), Gaps = 6/280 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA LF ++ +PN++TY++LING C A +F M++ + C PD
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDV 380
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I+G CK V EL M + + + VTY ++I GF A+D + A+ +F +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++T++ ++D LCKNGK+E+A + E + + + P+ + YN + +G C G+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V +LF S+ G K +V +Y+ +I+G+CK E A +L+ +M G P TYNT
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
L + +L EM+ A D Y D L
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 182/367 (49%), Gaps = 6/367 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
A++LF EM+ P V ++ ++ + K D +M+ ++ ++ T
Sbjct: 49 AVDLFGEMVKSRPF------PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
YN +I C + + A + +MM G P++VT + +++ C ++ EA L++ M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++G +P+ + TL+ G + + A L M GC+ ++ +Y +ING CK E +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
AL+L ++M I+ VV Y+T+ L + V+ A LF EM G+ D + Y + I
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
LC G +A L + K ++ +++ LID K G+L A +LF + + +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
++VTYN +I+ C ++D+A +F M +K PD V +NTL+ G + + +EL
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 398 LHRMDER 404
M R
Sbjct: 403 FRDMSRR 409
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 143/294 (48%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
+EA LF EM+ P++V FS ++ + K K + E M +GV N + YN +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ C +++ A + M +G ++ + + L+NG+C I A++L +M+ G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
+P VT+ TL GLF+ ++ A L + M G D Y I+GLCK G AL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
L + K E D+ YS +ID LCK + A LF + + DV TY+ +I LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
G+ A L DM + + P+ V FN+L+ + + + +L M +R+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 150/286 (52%), Gaps = 6/286 (2%)
Query: 124 QGVQPNVVTFSVIMDELCKNG----KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
+G+ + +++ ++L +N K++EA L M++ P+ ++ L+
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
+ + ME +G HN+++Y+I+IN C+ ++ AL++ +M+ G P++VT N
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
+L G +++ A L D+M G DT + T + GL ++ EA+ L + +
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
C+ D+ +Y +I+GLCK G +A L + + +G + ADVV Y+ +I +LC +D A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRN-NETSKVVELLHRMDER 404
+LF +M+ KG+ PD +++L + C+ N S LL M ER
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSL-ISCLCNYGRWSDASRLLSDMLER 304
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/400 (39%), Positives = 235/400 (58%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A L ++ G +PN +TY ++N +C++G T +A+ L +M N K DAV
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 264
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+ IIDGLCK+G +D A L +M+ K D++TYN++I GFC A ++ +L +M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + PNVVTFSV++D K GK+ EA QLL+ M+Q G+ PN YN+L+DGFC R+
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A ++ M S GC ++ +++ILINGYCK I+ L L+ EM +G+ VTYNTL
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + ++E A KLF EM V D +Y+ +DGLC NG + +ALE+F + K
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
ELDI Y +I G+C + ++ AW+LF SLP + D YNIMI LC + KA
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF M +G APD + +N L+ + +++ + EL+ M
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 220/402 (54%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L ++ G +P +IT +TL+NGLC G A+ L + M+ E G +P+ V
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV----ETGF--QPNEV 229
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++ +CK G A ELL +M+++NI D V Y+ +I G C + A LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G + +++T++ ++ C G+ ++ ++LL MI+ + PN ++ L+D F G++
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A +L M G N +Y+ LI+G+CK +E A+ + M+SKG P ++T+N L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + ++++ +LF EM GV A+T Y T + G C++G + A +LF+ + +
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
DI SY L+DGLC +G L+ A E+F + + + D+ Y I+IH +C K+D A D
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV D A+N ++ R + SK L +M E
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Score = 224 bits (571), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 217/399 (54%), Gaps = 6/399 (1%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
AL ++++ G ++ T S +IN CR A + +++ E PD VI+
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE------PDTVIFN 162
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
T+++GLC E V +A EL+ +M + P ++T N+++ G C ++A L M++
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QPN VT+ +++ +CK+G+ A +LL M + ++ +A Y+ ++DG C G ++ A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
LF ME G K ++ +Y+ LI G+C + L +M+ + I P VVT++ L
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ ++ A +L EM + G+A +T Y + IDG CK + EA+++ + C+ D
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
I +++ LI+G CK+ R+ ELF + +IA+ VTYN ++ C GK++ A LF
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+M ++ V PD V++ L+ G N E K +E+ ++++
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Score = 178 bits (452), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 203/405 (50%), Gaps = 10/405 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A LF + P VI ++ L + + +T + L L ++M + G+
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK----GIA----HS 122
Query: 62 IYT--TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
IYT +I+ C+ + A + ++ PD V +N+++ G C +EA L
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
M++ G +P ++T + +++ LC NGK+ +A L++ M++ G +PN Y +++ C +G
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
+ A EL ME K + YSI+I+G CK+ ++ A +L++EM KG K ++TYN
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
TL G + + KL +M + ++ + + ID K G + EA +L + +
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
+ +Y+ LIDG CK RL+ A ++ + D++T+NI+I+ C ++D
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+LF +M +GV + V +NTL+ G ++ + +L M R
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 165/325 (50%)
Query: 77 DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
D A +L M P V+ +N + L +M +G+ ++ T S++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
++ C+ K+ A + ++++G P+ ++NTL++G CL RV+ A EL M MG
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
K + + + L+NG C N ++ A+ L M+ G +P VTY + + + Q A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
L +M+ + D Y IDGLCK+G + A LF + I + DI +Y+ LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
+GR +L + + + +VVT++++I + +GK+ +A L +M +G+AP+ +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
+N+L+ G + N + ++++ M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLM 394
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 154/296 (52%), Gaps = 6/296 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L ++ G PN ITY++LI+G C+ A+ + + MI+ C PD +
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG------CDPDIM 404
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+ +I+G CK +D EL +M + + + VTYN++++GFC + AK+LF EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + V+P++V++ +++D LC NG++E+A ++ + + + + +Y ++ G C +V
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A +LF S+ G K + +Y+I+I+ C+ + A L+ +M +G P +TYN L
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
A +L +EM+ G AD + I+ L L++ T R
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 144/294 (48%)
Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
+++A LF +M+ P V+ F+ + + K + E L + M G+ + + +
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
+++ FC +++ A + +G + + ++ L+NG C + AL L M+ G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
KPT++T NTL GL +V A L D M G + Y ++ +CK+G A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
EL R + +LD YS +IDGLCK G L A+ LF+ + AD++TYN +I
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
C G+ D L DM + ++P+ V F+ L+ ++ + + +LL M +R
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 127/260 (48%)
Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
K ++A L MIQ P +N L T + L MES G H++++ S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
I+IN +C+ +++ A S +++ G +P V +NTL GL +V A +L D M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
G T ++GLC NG + +A+ L + + + +Y +++ +CKSG+ +A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
EL + + D V Y+I+I LC DG +D A +LF +ME KG D + +NTL+ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 385 CIRNNETSKVVELLHRMDER 404
+LL M +R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKR 327
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%)
Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
+ A+ L+ +M+ PTV+ +N LF + + Q E L +M+ G+A +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
I+ C+ + A + L E D ++ L++GLC R+ A EL +
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
++T N +++ LC +GK+ A L M G P+ V + ++ ++ +T+ +E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 397 LLHRMDERN 405
LL +M+ERN
Sbjct: 250 LLRKMEERN 258
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 300 bits (769), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 239/400 (59%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L ++ GC+P+V+TY++++NG+CR+G T +AL+L +M N K D
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVF 229
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+TIID LC++G +D A L +M+ K I VVTYNS++RG C A N+ L +M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + PNV+TF+V++D K GK++EA++L + MI G+ PN YNTLMDG+C+ R+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A + M C ++ +++ LI GYC K ++ + ++ + +G+ VTY+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +++ A +LF EM HGV D Y +DGLC NG + +ALE+F L+ K
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+L I Y+ +I+G+CK G+++ AW LF SLP + +V+TY +MI LC G + +A+
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
L ME G AP+ +NTL+ +R+ + + +L+ M
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 235 bits (600), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 219/401 (54%), Gaps = 6/401 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A ++ K+ G EP+ T++TLI GL G A+ L + M+ NG C+PD V
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG-----CQPDVVT 195
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y +I++G+C+ G A +LL +M+++N+ DV TY+++I C + A LF EM
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+G++ +VVT++ ++ LCK GK + + LL+ M+ + PN +N L+D F G++
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
A EL+ M + G N+ +Y+ L++GYC + A ++ M+ P +VT+ +L
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G + +V+ K+F + + G+ A+ Y + G C++G I A ELF+ +
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
D+ +Y L+DGLC +G+L+ A E+F L + + +V Y +I +C GK++ A +L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
F + KGV P+ + + ++ G + S+ LL +M+E
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Score = 188 bits (477), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 212/406 (52%), Gaps = 14/406 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
+A ALF ++ P+++ +S + + RT + L+ +++ +NG
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN-------- 122
Query: 61 VIYT--TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
IYT +I+ C+ A +L ++ PD T+N++I+G +EA L
Sbjct: 123 -IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
M++ G QP+VVT++ I++ +C++G A LL M + V+ + F Y+T++D C
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVT 237
G ++ A LF ME+ G K +V +Y+ L+ G CK K +GAL L +M+S+ I P V+T
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVIT 300
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
+N L + +++ A +L+ EM G++ + Y T +DG C + EA + +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
KC DI +++ LI G C R+ ++F ++ + L+A+ VTY+I++ C GK+
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
A +LF +M + GV PD + + L+ G N + K +E+ + +
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 158/299 (52%), Gaps = 6/299 (2%)
Query: 17 PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
PNVIT++ L++ + G A L++EMI G+ P+ + Y T++DG C + +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITR----GI--SPNIITYNTLMDGYCMQNRL 349
Query: 77 DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
+A +L M +PD+VT+ S+I+G+C ++ ++F + +G+ N VT+S++
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
+ C++GK++ A +L + M+ GV P+ Y L+DG C G++ +A E+F ++
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
+ Y+ +I G CK ++E A +L+ + KG+KP V+TY + GL + + A
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
L +M+ G A + Y T I ++G + + +L ++ D S +ID L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 152/292 (52%), Gaps = 3/292 (1%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
++A LF EM+ P++V FS + + + + + G+ N + N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC + A + + +G + + +++ LI G ++ A+ L M+ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
+P VVTYN++ G+ A L +M+ V AD + Y T ID LC++G I A+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
LF+ + + + +Y+ L+ GLCK+G+ L + ++ +V+T+N+++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVELLHR 400
+GK+ +A++L+ +M +G++P+ + +NTLM G C++N +E + +++L+ R
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 129/260 (49%)
Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
K ++A L + MI+ P+ ++ T + N + +E G HN+++ +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
I+IN +C+ + A S+ +++ G +P T+NTL GLF +V A L D M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
G D Y + ++G+C++G AL+L R + + D+ +YS +ID LC+ G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
LF + + + VVTYN ++ LC GK + L DM ++ + P+ + FN L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 385 CIRNNETSKVVELLHRMDER 404
++ + + EL M R
Sbjct: 308 FVKEGKLQEANELYKEMITR 327
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
G+ +I + + A LF EM R + F + + L+ + L +
Sbjct: 63 GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121
Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
+I + + +I+ C+ + A+ + + + D T+N +I L +GK+ +A L
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
M G PD V +N+++ G R+ +TS ++LL +M+ERN
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 299 bits (766), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/400 (39%), Positives = 235/400 (58%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L K+ +GC+PN +TY ++N +C++G T +A+ L +M N K DAV
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 264
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+ IIDGLCK G +D A L +M+ K I +++TYN +I GFC A ++ +L +M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + PNVVTFSV++D K GK+ EA +L + MI G+ P+ Y +L+DGFC +
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
++A ++ M S GC N+ +++ILINGYCK I+ L L+ +M +G+ VTYNTL
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G E+ ++ A +LF EM V + Y+ +DGLC NG +ALE+F + K
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
ELDI Y+ +I G+C + ++ AW+LF SLP + V TYNIMI LC G + +A
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF ME G APD +N L+ + + + +K V+L+ +
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 225/402 (55%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L ++ G +P++IT +TL+NGLC +G A+ L ++M+ E+G C+P+AV
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYG--CQPNAV 229
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++ +CK G A ELL +M+++NI D V Y+ +I G C + A LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G+ N++T+++++ C G+ ++ ++LL MI+ + PN ++ L+D F G++
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A+EL M G + +Y+ LI+G+CK ++ A + M+SKG P + T+N L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + ++++ +LF +M GV ADT Y T I G C+ G + A ELF+ + K
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+I +Y L+DGLC +G + A E+F + + + D+ YNI+IH +C K+D A D
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV P +N ++ G + S+ L +M+E
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 235 bits (599), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 221/399 (55%), Gaps = 6/399 (1%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
AL +++ G N+ T S +IN CR +A + ++I E P+ + ++
Sbjct: 109 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE------PNTITFS 162
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
T+I+GLC EG V +A EL+ +M + PD++T N+++ G C + EA L +M++
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QPN VT+ +++ +CK+G+ A +LL M + ++ +A Y+ ++DG C G ++ A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
LF ME G N+ +Y+ILI G+C + L +M+ + I P VVT++ L
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ ++ A +L EM G+A DT Y + IDG CK ++ +A ++ + C+ +
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
IR+++ LI+G CK+ R+ ELF + ++AD VTYN +I C GK++ A +LF
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+M ++ V P+ V + L+ G N E+ K +E+ ++++
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 171/324 (52%), Gaps = 7/324 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+ A L + PNV+T+S LI+ + G A L +EMI+ G+ PD +
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR----GIA--PDTI 369
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YT++IDG CKE +DKA +++ M K +P++ T+N +I G+C AN ++ LF +M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+GV + VT++ ++ C+ GK+ A +L + M+ V PN Y L+DG C G
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+A E+F +E + ++ Y+I+I+G C +++ A L+ + KG+KP V TYN +
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GL + + A LF +M+ G A D W Y I +G ++++L L+
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW 325
+D + +ID L GRLK ++
Sbjct: 610 SVDASTIKMVIDML-SDGRLKKSF 632
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 191/388 (49%), Gaps = 6/388 (1%)
Query: 17 PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
P VI +S L + + +T + L L ++M E + + + +I+ C+ +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQM-----ELKGIAH-NLYTLSIMINCFCRCRKL 139
Query: 77 DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
A + ++ P+ +T++++I G C +EA L M++ G +P+++T + +
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
++ LC +GK EA L++ M++ G +PNA Y +++ C +G+ A EL ME
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
K + YSI+I+G CK+ ++ A +L++EM KGI ++TYN L G + + K
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
L +M + + + + ID K G + EA EL + + D +Y+ LIDG C
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
K L A ++ + ++ T+NI+I+ C ++D +LF M +GV D V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
+NTL+ G + + EL M R
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 165/325 (50%)
Query: 77 DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
D A +L M P V+ ++ + + L +M +G+ N+ T S++
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
++ C+ K+ A + +I++G PN ++TL++G CL GRV+ A EL M MG
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
K ++ + + L+NG C + + A+ L +M+ G +P VTY + + + Q A +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
L +M+ + D Y IDGLCK+G + A LF + + +I +Y+ LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
+GR +L + + + +VVT++++I + +GK+ +A +L +M +G+APD +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
+ +L+ G + N K +++ M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLM 394
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 147/309 (47%)
Query: 96 VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
++Y +R +++A LF +M+ P V+ FS + + K + + L +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
M G+ N + + +++ FC ++ A + +G + N ++S LING C
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
+ AL L M+ G KP ++T NTL GL + A L D+M +G + Y
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
++ +CK+G A+EL R + +LD YS +IDGLCK G L A+ LF+ +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
+ +++TYNI+I C G+ D L DM + + P+ V F+ L+ ++ + +
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 396 ELLHRMDER 404
EL M R
Sbjct: 354 ELHKEMIHR 362
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%)
Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
+ A+ L+ +M+ PTV+ ++ LF + + Q + L +M+ G+A + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
I+ C+ + A + L E + ++S LI+GLC GR+ A EL +
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
D++T N +++ LC GK +A L M G P+ V + ++ ++ +T+ +E
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 397 LLHRMDERN 405
LL +M+ERN
Sbjct: 250 LLRKMEERN 258
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 298 bits (763), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 237/400 (59%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ GC+P+++TY ++NGLC+ G +AL+L ++M G E P V
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE------PGVV 257
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IY TIID LC V+ A L +M +K I P+VVTYNS+IR C ++A RL +M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVVTFS ++D K GK+ EA +L + MI+ + P+ F Y++L++GFC+ R+
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ AK +F M S C NV +Y+ LI G+CK K ++ + L+ EM +G+ VTY TL
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G F+ + + A +F +M GV D Y +DGLC NG + AL +F L+ K
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
E DI +Y+ +I+G+CK+G+++ W+LF SL + +VVTY M+ C G ++A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF +M+ +G PD +NTL+ +R+ + + EL+ M
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 258 bits (659), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 223/407 (54%), Gaps = 16/407 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A +L ++ G +P+ T++TLI+GL R A+ L + M+ C+PD V
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG------CQPDLV 222
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++GLCK G +D A LL +M+ I P VV YN++I C + N+A LF EM
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G++PNVVT++ ++ LC G+ +AS+LL MI+ + PN ++ L+D F G++
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A++L+ M ++F+YS LING+C + ++ A ++ M+SK P VVTYNTL
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL-----CKNGYIVEALELFRTL 296
G + +V+ +LF EM + G+ +T Y T I G C N IV F+ +
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV-----FKQM 457
Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
DI +YS L+DGLC +G+++ A +F L R + D+ TYNIMI +C GK+
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+ DLF + KGV P+ V + T+M G R + L M E
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 206/399 (51%), Gaps = 9/399 (2%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
+L +++ G N+ TYS LIN CR +AL + +M+ E PD V
Sbjct: 102 SLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYE------PDIVTLN 155
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
++++G C + A L+ QM + PD T+N++I G N ++EA L M+ +
Sbjct: 156 SLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK 215
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QP++VT+ ++++ LCK G ++ A LL+ M Q + P +YNT++D C VN A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
LF M++ G + NV +Y+ LI C A L S+M+ + I P VVT++ L
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ ++ A KL+DEM + + D + Y + I+G C + + EA +F + C +
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
+ +Y+ LI G CK+ R+ ELF + + L+ + VTY +IH + D A +F
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNN--ETSKVV-ELLHR 400
M + GV PD + ++ L+ G N ET+ VV E L R
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 187/367 (50%), Gaps = 6/367 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
A+NLF +M+ P V ++ ++ + K D L QM++ I+ ++ T
Sbjct: 65 AVNLFGDMVKSRPF------PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
Y+ +I FC + + A + +MM G +P++VT + +++ C ++ +A L+ M+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++G +P++F +NTL+ G R + A L M GC+ ++ +Y I++NG CK +I+
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
ALSL +M I+P VV YNT+ L V A LF EM G+ + Y + I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
LC G +A L + K ++ ++S LID K G+L A +L+ + + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
D+ TY+ +I+ C ++D+A +F M +K P+ V +NTL+ G + + +EL
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 398 LHRMDER 404
M +R
Sbjct: 419 FREMSQR 425
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 141/241 (58%), Gaps = 6/241 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L+ ++ +P++ TYS+LING C A ++FE MI+ + C P+
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 396
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I G CK VD+ EL +M + + + VTY ++I GF A + + A+ +F +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV P+++T+S+++D LC NGK+E A + E + + + P+ + YN +++G C G+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V +LF S+ G K NV +Y+ +++G+C+ E A +L+ EM +G P TYNT
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 241 L 241
L
Sbjct: 577 L 577
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 146/294 (49%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
++A LF +M+ P++V FS ++ + K K + L E M +G+ N + Y+ L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC +++ A + M +G + ++ + + L+NG+C I A+SL +M+ G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
+P T+NTL GLF ++ A L D M G D Y ++GLCK G I AL
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
L + + K E + Y+ +ID LC + A LF + + +VVTYN +I LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
G+ A L DM + + P+ V F+ L+ ++ + + +L M +R+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 138/260 (53%)
Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
K+++A L M++ P+ ++ L+ + + L M+++G HN+++YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
ILIN +C+ ++ AL++ ++M+ G +P +VT N+L G +++ A L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
G D++ + T I GL ++ EA+ L + + C+ D+ +Y +++GLCK G + +A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
L + +G + VV YN +I ALC ++ A +LF +M+ KG+ P+ V +N+L+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 385 CIRNNETSKVVELLHRMDER 404
S LL M ER
Sbjct: 301 LCNYGRWSDASRLLSDMIER 320
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 39/247 (15%)
Query: 156 MIQIGVRPNAFVYNTLM-DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
+ I N FV+ +L+ G C T + + F + G +++ SI +
Sbjct: 4 LFAISSTGNRFVHRSLLGKGKCGTAPPSFSHCSFWVRDFSGVRYDYRKISI---NRLNDL 60
Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
+++ A++L+ +M+ P++V ++ L + ++++ + L ++MQ G++ + +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY--- 117
Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
+YS LI+ C+ +L +A + + +
Sbjct: 118 --------------------------------TYSILINCFCRRSQLSLALAVLAKMMKL 145
Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
D+VT N +++ C ++ A L M G PD FNTL+ G R+N S+
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 395 VELLHRM 401
V L+ RM
Sbjct: 206 VALVDRM 212
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 6 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
LF L G +PNV+TY+T+++G CR G A LF EM E G + PD+ Y T
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM----KEEGPL--PDSGTYNT 576
Query: 66 IIDGLCKEGFVDKAKELLLQMK 87
+I ++G + EL+ +M+
Sbjct: 577 LIRAHLRDGDKAASAELIREMR 598
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 234/400 (58%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ GC+P+++TY T++NGLC+ G +AL+L ++M G E D V
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVV 259
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IY TIIDGLCK +D A L +M +K I PDV TY+S+I C ++A RL +M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVVTFS ++D K GK+ EA +L + MI+ + P+ F Y++L++GFC+ R+
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ AK +F M S C NV +YS LI G+CK K +E + L+ EM +G+ VTY TL
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G F+ + A +F +M GV + Y +DGLCKNG + +A+ +F L+
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
E DI +Y+ +I+G+CK+G+++ WELF +L + +V+ YN MI C G ++A
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
L M+ G P+ +NTL+ +R+ + EL+ M
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 229/402 (56%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A AL ++ G +P+ T++TLI+GL A+ L ++M+ C+PD V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG------CQPDLV 224
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T+++GLCK G +D A LL +M+ I DVV YN++I G C ++A LF EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G++P+V T+S ++ LC G+ +AS+LL MI+ + PN ++ L+D F G++
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A++L+ M ++F+YS LING+C + ++ A ++ M+SK P VVTY+TL
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +VE +LF EM + G+ +T Y T I G + A +F+ + +
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+I +Y+ L+DGLCK+G+L A +F L R + D+ TYNIMI +C GK++ +
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF ++ KGV+P+ +A+NT++ G R + LL +M E
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 208/399 (52%), Gaps = 9/399 (2%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
+L +++ G ++ TYS IN CR +AL + +M+ E PD V +
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE------PDIVTLS 157
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
++++G C + A L+ QM + PD T+ ++I G N ++EA L +M+ +
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QP++VT+ +++ LCK G ++ A LL+ M + + + +YNT++DG C ++ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
LF M++ G + +VF+YS LI+ C A L S+M+ + I P VVT++ L
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ ++ A KL+DEM + + D + Y + I+G C + + EA +F + C +
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
+ +YS LI G CK+ R++ ELF + + L+ + VTY +IH D A +F
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
M + GV P+ + +N L+ G +N + +K V E L R
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 187/367 (50%), Gaps = 6/367 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
A++LF +M+ P V + ++ + K + L QM+ I+ D+ T
Sbjct: 67 AVDLFGDMVKSRPF------PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
Y+ I FC + + A + +MM G +P++VT S +++ C + ++ +A L++ M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++G +P+ F + TL+ G L + + A L M GC+ ++ +Y ++NG CK +I+
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
ALSL +M I+ VV YNT+ GL + ++ A LF EM G+ D + Y + I
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
LC G +A L + K ++ ++S LID K G+L A +L+ + + +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
D+ TY+ +I+ C ++D+A +F M +K P+ V ++TL+ G + + +EL
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 398 LHRMDER 404
M +R
Sbjct: 421 FREMSQR 427
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 150/270 (55%), Gaps = 6/270 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L+ ++ +P++ TYS+LING C A ++FE MI+ + C P+
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 398
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y+T+I G CK V++ EL +M + + + VTY ++I GF A D + A+ +F +
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++T+++++D LCKNGK+ +A + E + + + P+ + YN +++G C G+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V ELF ++ G NV +Y+ +I+G+C+ E A SL +M G P TYNT
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
L E + +L EM+ G A D
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDA 608
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 171/330 (51%), Gaps = 3/330 (0%)
Query: 76 VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
VD A +L M P +V +N ++ N L +M G+ ++ T+S+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
++ C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
K + F+++ LI+G + + A++L +M+ +G +P +VTY T+ GL + ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
L +M++ + AD Y T IDGLCK ++ +AL LF + D+ +YS LI L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
C GR A L + + +VVT++ +I A +GK+ +A L+ +M + + PD
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 376 VAFNTLMLG-CI--RNNETSKVVELLHRMD 402
+++L+ G C+ R +E + EL+ D
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 151/294 (51%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
++A LF +M+ P++V F+ ++ + K K E L E M +G+ + + Y+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC +++ A + M +G + ++ + S L+NGYC +K I A++L +M+ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
KP T+ TL GLF ++ A L D+M + G D Y T ++GLCK G I AL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
L + + K E D+ Y+ +IDGLCK + A LF + + DV TY+ +I LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
G+ A L DM + + P+ V F+ L+ ++ + + +L M +R+
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 25/315 (7%)
Query: 114 AKRLFIEMMDQGV--QPNVVTF---------------------SVIMDELCKNGKMEEAS 150
AKRLF+ QG+ P V +F ++ + L K+++A
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68
Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
L M++ P+ +N L+ + L M+++G H++++YSI IN +
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
C+ ++ AL++ ++M+ G +P +VT ++L G ++ A L D+M G DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
+ + T I GL + EA+ L + C+ D+ +Y +++GLCK G + +A L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN-N 389
+ +G + ADVV YN +I LC MD A +LF +M+ KG+ PD +++L + C+ N
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL-ISCLCNYG 307
Query: 390 ETSKVVELLHRMDER 404
S LL M ER
Sbjct: 308 RWSDASRLLSDMIER 322
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 29/236 (12%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
EA +F + + C PNV+TYSTLI G C+ + LF EM I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 47 NG--------NGEF------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
+G N + V P+ + Y ++DGLCK G + KA + ++ +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 93 PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
PD+ TYN +I G C A + LF + +GV PNV+ ++ ++ C+ G EEA L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
L+ M + G PN+ YNTL+ G + EL M S G + + ++ N
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---------------MIN 47
A +F ++ + G PN++TY+ L++GLC+ G A+ +FE MI
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 48 GNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
G + G V P+ + Y T+I G C++G ++A LL +MK+ P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 94 DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
+ TYN++IR D + L EM G + T ++ + L +G+++++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 238/400 (59%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ GC+PN++TY ++NGLC+ G T +ALNL +M E D V
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE------ADVV 261
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
I+ TIID LCK VD A L +M+ K I P+VVTY+S+I C ++A +L +M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PN+VTF+ ++D K GK EA +L + MI+ + P+ F YN+L++GFC+ R+
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
++AK++F M S C +V +Y+ LI G+CK+K +E L+ EM +G+ VTY TL
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GLF + A K+F +M GV D Y +DGLC NG + +ALE+F ++ +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+LDI Y+ +I+G+CK+G++ W+LF SL + +VVTYN MI LC+ + +A+
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
L M+ G P+ +NTL+ +R+ + + EL+ M
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 219/402 (54%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A AL ++ G P+ IT++TLI+GL A+ L + M+ C+P+ V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 226
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++GLCK G D A LL +M+ I DVV +N++I C ++A LF EM
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G++PNVVT+S ++ LC G+ +ASQLL MI+ + PN +N L+D F G+
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A++L+ M ++F+Y+ L+NG+C + ++ A ++ M+SK P VVTYNTL
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +VE +LF EM G+ DT Y T I GL +G A ++F+ +
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
DI +YS L+DGLC +G+L+ A E+F + + + D+ Y MI +C GK+D D
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV P+ V +NT++ G + LL +M E
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 196/383 (51%), Gaps = 6/383 (1%)
Query: 21 TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
TY+ LIN CR +AL L +M+ E P V +++++G C + A
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAV 175
Query: 81 ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
L+ QM + PD +T+ ++I G N ++EA L M+ +G QPN+VT+ V+++ L
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
CK G + A LL M + + ++NT++D C V+ A LF ME+ G + NV
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
+YS LI+ C A L S+M+ K I P +VT+N L + + A KL+D+
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
M + + D + Y + ++G C + + +A ++F + C D+ +Y+ LI G CKS R
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
++ ELF + L+ D VTY +I L DG D A +F M + GV PD + ++
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
L+ G N + K +E+ M +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQK 498
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 4/359 (1%)
Query: 50 GEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
G FG + K P V + ++ + K D L +M+ I + TYN +I F
Sbjct: 71 GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
C + + A L +MM G +P++VT S +++ C ++ +A L++ M+++G RP+
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
+ TL+ G L + + A L M GC+ N+ +Y +++NG CK + + AL+L ++
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
M + I+ VV +NT+ L + V+ A LF EM+ G+ + Y + I LC G
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
+A +L + K ++ +++ LID K G+ A +L+ + + + D+ TYN
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+++ C ++DKA +F M +K PD V +NTL+ G ++ EL M R
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 141/241 (58%), Gaps = 6/241 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L+ + +P++ TY++L+NG C A +FE M++ + C PD
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD------CFPDV 400
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I G CK V+ EL +M + + D VTY ++I+G + D + A+++F +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV P+++T+S+++D LC NGK+E+A ++ + M + ++ + ++Y T+++G C G+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V+ +LF S+ G K NV +Y+ +I+G C + ++ A +L +M G P TYNT
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 241 L 241
L
Sbjct: 581 L 581
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 152/308 (49%)
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
Y ++R + ++A LF M+ P++V F+ ++ + K K + L E M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++ + + YN L++ FC +++ A L M +G + ++ + S L+NGYC K I
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A++L +M+ G +P +T+ TL GLF ++ A L D M + G + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+GLCK G AL L + K E D+ ++ +ID LCK + A LF + +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
+VVTY+ +I LC+ G+ A L DM K + P+ V FN L+ ++ + + +L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 398 LHRMDERN 405
M +R+
Sbjct: 353 YDDMIKRS 360
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 296 bits (757), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 238/400 (59%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ A GC+P+++TY ++NGLC+ G T +A NL +M G E P +
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVL 257
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IY TIIDGLCK +D A L +M+ K I P+VVTY+S+I C ++A RL +M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + P+V TFS ++D K GK+ EA +L + M++ + P+ Y++L++GFC+ R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ AK++F M S C +V +Y+ LI G+CK K +E + ++ EM +G+ VTYN L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GLF+ + A ++F EM GV + Y T +DGLCKNG + +A+ +F L+ K
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
E I +Y+ +I+G+CK+G+++ W+LF +L + DVV YN MI C G ++A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF +M+ G P+ +NTL+ +R+ + EL+ M
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 264 bits (675), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 225/402 (55%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ G +PN +T++TLI+GL A+ L + M+ C+PD V
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG------CQPDLV 222
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++GLCK G D A LL +M+ + P V+ YN++I G C ++A LF EM
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G++PNVVT+S ++ LC G+ +AS+LL MI+ + P+ F ++ L+D F G++
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A++L+ M ++ +YS LING+C + ++ A ++ M+SK P VVTYNTL
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +VE ++F EM + G+ +T Y I GL + G A E+F+ +
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+I +Y+ L+DGLCK+G+L+ A +F L R + + TYNIMI +C GK++ D
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF ++ KGV PD VA+NT++ G R + L M E
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 219 bits (558), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 209/399 (52%), Gaps = 9/399 (2%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
+L +++ G N TYS LIN CR +AL + +M+ E P+ V +
Sbjct: 102 SLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE------PNIVTLS 155
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
++++G C + +A L+ QM P+ VT+N++I G N ++EA L M+ +
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QP++VT+ V+++ LCK G + A LL M Q + P +YNT++DG C ++ A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
LF ME+ G + NV +YS LI+ C A L S+M+ + I P V T++ L
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ ++ A KL+DEM + + Y + I+G C + + EA ++F + C D
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
+ +Y+ LI G CK R++ E+F + + L+ + VTYNI+I L G D A ++F
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
+M + GV P+ + +NTL+ G +N + K V E L R
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 185/367 (50%), Gaps = 6/367 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
A+ LF EM+ P + ++ ++ + K D L QM++ I + T
Sbjct: 65 AVALFGEMVKSRPF------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
Y+ +I FC + A + +MM G +PN+VT S +++ C + ++ EA L++ M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
G +PN +NTL+ G L + + A L M + GC+ ++ +Y +++NG CK + +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A +L ++M ++P V+ YNT+ GL + ++ A LF EM+ G+ + Y + I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
LC G +A L + K D+ ++S LID K G+L A +L+ + + +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
+VTY+ +I+ C ++D+A +F M +K PD V +NTL+ G + + +E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 398 LHRMDER 404
M +R
Sbjct: 419 FREMSQR 425
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 149/270 (55%), Gaps = 6/270 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L+ ++ +P+++TYS+LING C A +FE M++ + C PD
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 396
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I G CK V++ E+ +M + + + VTYN +I+G A D + A+ +F E
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++T++ ++D LCKNGK+E+A + E + + + P + YN +++G C G+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V +LF ++ G K +V +Y+ +I+G+C+ E A +L+ EM G P YNT
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
L E + +L EM+ G A D
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDA 606
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
++A LF EM+ P+++ FS ++ + K K + L E M +G+ N + Y+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC ++ A + M +G + N+ + S L+NGYC +K I A++L +M G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
+P VT+NTL GLF ++ A L D M G D Y ++GLCK G A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
L + K E + Y+ +IDGLCK + A LF + + +VVTY+ +I LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
G+ A L DM + + PD F+ L+ ++ + + +L M +R+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 168/326 (51%), Gaps = 3/326 (0%)
Query: 76 VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
+D A L +M P ++ ++ ++ N + L +M + G+ N T+S+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
+++ C+ ++ A +L M+++G PN ++L++G+C + R++ A L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
+ N +++ LI+G + + A++L M++KG +P +VTY + GL + + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
L ++M++ + Y T IDGLCK ++ +AL LF+ + ++ +YS LI L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
C GR A L + + DV T++ +I A +GK+ +A L+ +M + + P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 376 VAFNTLMLG-CI--RNNETSKVVELL 398
V +++L+ G C+ R +E ++ E +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFM 387
Score = 134 bits (338), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 142/272 (52%), Gaps = 6/272 (2%)
Query: 138 DELCKNG----KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
++L +NG K+++A L M++ P+ ++ L+ + + L M++
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
+G HN ++YSILIN +C+ ++ AL++ +M+ G +P +VT ++L G ++
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
A L D+M G +T + T I GL + EA+ L + C+ D+ +Y +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
GLCK G +A+ L + + +G L V+ YN +I LC MD A +LF +ME KG+ P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 374 DCVAFNTLMLGCIRN-NETSKVVELLHRMDER 404
+ V +++L + C+ N S LL M ER
Sbjct: 290 NVVTYSSL-ISCLCNYGRWSDASRLLSDMIER 320
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 6/207 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
E +F ++ G N +TY+ LI GL + G +A +F+EM++ GV P+ +
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD----GV--PPNIM 467
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T++DGLCK G ++KA + ++ + P + TYN +I G C A + LF +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+GV+P+VV ++ ++ C+ G EEA L + M + G PN+ YNTL+ G
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 182 NRAKELFVSMESMGCKHNVFSYSILIN 208
+ EL M S G + + ++ N
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---------------MIN 47
A +F ++ + G PN++TY+TL++GLC+ G A+ +FE MI
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 48 GNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
G + G V KPD V Y T+I G C++G ++A L +MK+ P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 94 DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
+ YN++IR D + L EM G + T ++ + L +G+++++
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 293 bits (749), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 236/400 (59%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ GC+PN++TY ++NGLC+ G +A NL +M E D V
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ADVV 186
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
I+ TIID LCK VD A L +M+ K I P+VVTY+S+I C ++A +L +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PN+VTF+ ++D K GK EA +L + MI+ + P+ F YN+L++GFC+ R+
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
++AK++F M S C ++ +Y+ LI G+CK+K +E L+ EM +G+ VTY TL
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GLF + A K+F +M GV D Y +DGLC NG + +ALE+F ++ +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+LDI Y+ +I+G+CK+G++ W+LF SL + +VVTYN MI LC+ + +A+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
L M+ G PD +NTL+ +R+ + + EL+ M
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 218/402 (54%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A AL ++ G P+ IT++TLI+GL A+ L + M+ C+P+ V
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 151
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++GLCK G +D A LL +M+ I DVV +N++I C ++A LF EM
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G++PNVVT+S ++ LC G+ +ASQLL MI+ + PN +N L+D F G+
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A++L M ++F+Y+ LING+C + ++ A ++ M+SK P + TYNTL
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +VE +LF EM G+ DT Y T I GL +G A ++F+ +
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
DI +YS L+DGLC +G+L+ A E+F + + + D+ Y MI +C GK+D D
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV P+ V +NT++ G + LL +M E
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 204/399 (51%), Gaps = 6/399 (1%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
+L K++ G N+ TY+ LIN CR +AL L +M+ E P V +
Sbjct: 31 SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYE------PSIVTLS 84
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
++++G C + A L+ QM + PD +T+ ++I G N ++EA L M+ +
Sbjct: 85 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 144
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QPN+VT+ V+++ LCK G ++ A LL M + + ++NT++D C V+ A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
LF ME+ G + NV +YS LI+ C A L S+M+ K I P +VT+N L
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ + A KL D+M + + D + Y + I+G C + + +A ++F + C D
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
+ +Y+ LI G CKS R++ ELF + L+ D VTY +I L DG D A +F
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
M + GV PD + ++ L+ G N + K +E+ M +
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 174/347 (50%)
Query: 58 PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
P + ++ + K D L +M+ I+ ++ TYN +I FC + + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
+MM G +P++VT S +++ C ++ +A L++ M+++G RP+ + TL+ G L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
+ + A L M GC+ N+ +Y +++NG CK +I+ A +L ++M + I+ VV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
+NT+ L + V+ A LF EM+ G+ + Y + I LC G +A +L +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
K ++ +++ LID K G+ A +L + + + D+ TYN +I+ C ++D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
KA +F M +K PD +NTL+ G ++ EL M R
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 139/241 (57%), Gaps = 6/241 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L + +P++ TY++LING C A +FE M++ + C PD
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD------CFPDL 325
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
Y T+I G CK V+ EL +M + + D VTY ++I+G + D + A+++F +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV P+++T+S+++D LC NGK+E+A ++ + M + ++ + ++Y T+++G C G+
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V+ +LF S+ G K NV +Y+ +I+G C + ++ A +L +M G P TYNT
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 241 L 241
L
Sbjct: 506 L 506
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 141/278 (50%)
Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
P++ F+ ++ + K K + L E M ++G+ N + YN L++ FC +++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
M +G + ++ + S L+NGYC K I A++L +M+ G +P +T+ TL GLF
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
++ A L D M + G + Y ++GLCK G I A L + K E D+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
++ +ID LCK + A LF + + +VVTY+ +I LC+ G+ A L DM
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
K + P+ V FN L+ ++ + + +L M +R+
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 132/249 (53%)
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
M++ P+ F +N L+ + + L M+ +G HN+++Y+ILIN +C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
I AL+L +M+ G +P++VT ++L G ++ A L D+M G DT + T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
I GL + EA+ L + C+ ++ +Y +++GLCK G + +A+ L + +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
+ ADVV +N +I +LC +D A +LF +ME KG+ P+ V +++L+ S
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 396 ELLHRMDER 404
+LL M E+
Sbjct: 241 QLLSDMIEK 249
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 6 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
LF L G +PNV+TY+T+I+GLC A L ++M E G + PD+ Y T
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM----KEDGPL--PDSGTYNT 505
Query: 66 IIDGLCKEGFVDKAKELLLQMK 87
+I ++G + EL+ +M+
Sbjct: 506 LIRAHLRDGDKAASAELIREMR 527
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 288 bits (738), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 235/400 (58%), Gaps = 9/400 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ GC+P+++TY T++NGLC+ G +ALNL +M K + V
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVV 259
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
I+ TIID LCK V+ A +L +M+ K I P+VVTYNS+I C ++A RL M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVVTF+ ++D K GK+ EA +L E MIQ + P+ YN L++GFC+ R+
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ AK++F M S C N+ +Y+ LING+CK K +E + L+ EM +G+ VTY T+
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G F+ + A +F +M + V D Y + GLC G + AL +F+ L+ +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
EL+I Y+ +I+G+CK+G++ AW+LF SL + DVVTYN MI LC+ + +A D
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF M+ G P+ +NTL+ +R+ + + EL+ M
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 195/380 (51%), Gaps = 6/380 (1%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
+L +++ G ++ TYS IN CR +AL + +M+ E PD V +
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE------PDIVTLS 157
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
++++G C + A L+ QM + PD T+ ++I G N ++EA L +M+ +
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QP++VT+ +++ LCK G ++ A LL M ++ N ++NT++D C V A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
+LF ME+ G + NV +Y+ LIN C A L S ML K I P VVT+N L
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
F+ ++ A KL +EM + + DT Y I+G C + + EA ++F+ + C +
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
I++Y+ LI+G CK R++ ELF + + L+ + VTY +I G D A +F
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 365 DMEAKGVAPDCVAFNTLMLG 384
M + V D + ++ L+ G
Sbjct: 458 QMVSNRVPTDIMTYSILLHG 477
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 187/367 (50%), Gaps = 6/367 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
A++LF +M+ P V + ++ + K + L QM+ I+ D+ T
Sbjct: 67 AVDLFGDMVKSRPF------PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
Y+ I FC + + A + +MM G +P++VT S +++ C + ++ +A L++ M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++G +P+ F + TL+ G L + + A L M GC+ ++ +Y ++NG CK +I+
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
AL+L ++M + IK VV +NT+ L + VE A LF EM+ G+ + Y + I
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+ LC G +A L + K ++ +++ LID K G+L A +L + + +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
D +TYN++I+ C ++D+A +F M +K P+ +NTL+ G + VEL
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 398 LHRMDER 404
M +R
Sbjct: 421 FREMSQR 427
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 171/351 (48%), Gaps = 39/351 (11%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A LFT+++ G PNV+TY++LIN LC G A L M+ P+ V
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK------INPNVVT 330
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
+ +ID KEG + +A++L +M ++I+PD +TYN +I GFC N +EAK++F M+
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ PN+ T++ +++ CK ++E+ +L M Q G+ N Y T++ GF G +
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY-----SEM----------- 226
A+ +F M S ++ +YSIL++G C +++ AL ++ SEM
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 227 ----------------LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
S IKP VVTYNT+ GL ++ A LF +M+ G ++
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
Y T I ++ + EL + +R D + S L+ + GRL
Sbjct: 571 GTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRL 620
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 153/294 (52%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
++A LF +M+ P++V F+ ++ + K K E L E M +G+ + + Y+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC +++ A + M +G + ++ + S L+NGYC +K I A++L +M+ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
KP T+ TL GLF ++ A L D+M + G D Y T ++GLCK G I AL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
L + + + ++ ++ +ID LCK +++A +LF + + +VVTYN +I+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
G+ A L +M K + P+ V FN L+ + + + +L M +R+
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 164/314 (52%), Gaps = 1/314 (0%)
Query: 76 VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
VD A +L M P +V +N ++ N L +M G+ ++ T+S+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
++ C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
K + F+++ LI+G + + A++L +M+ +G +P +VTY T+ GL + ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
L ++M+ + A+ + T ID LCK ++ A++LF + ++ +Y+ LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
C GR A L ++ + +VVT+N +I A +GK+ +A L +M + + PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 376 VAFNTLMLG-CIRN 388
+ +N L+ G C+ N
Sbjct: 364 ITYNLLINGFCMHN 377
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 141/269 (52%), Gaps = 9/269 (3%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L ++ +P+ ITY+ LING C A +F+ M++ + C P+
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD------CLPNI 398
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
Y T+I+G CK V+ EL +M + + + VTY ++I+GF A D + A+ +F +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ V +++T+S+++ LC GK++ A + + + + + N F+YNT+++G C G+
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V A +LF S+ K +V +Y+ +I+G C + ++ A L+ +M G P TYNT
Sbjct: 519 VGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
L + +L EM+ G D
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGD 604
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 155/315 (49%), Gaps = 25/315 (7%)
Query: 114 AKRLFIEMMDQGV--QPNVVTF---------------------SVIMDELCKNGKMEEAS 150
AKRLF+ QG+ P V +F ++ + L K+++A
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68
Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
L M++ P+ +N L+ + L M+++G H++++YSI IN +
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
C+ ++ AL++ ++M+ G +P +VT ++L G ++ A L D+M G DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
+ + T I GL + EA+ L + C+ D+ +Y +++GLCK G + +A L +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN-N 389
+ + A+VV +N +I +LC ++ A DLF +ME KG+ P+ V +N+L + C+ N
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL-INCLCNYG 307
Query: 390 ETSKVVELLHRMDER 404
S LL M E+
Sbjct: 308 RWSDASRLLSNMLEK 322
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A +F L+ E N+ Y+T+I G+C+ G A +LF + KPD V
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---------CSLSIKPDVVT 537
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y T+I GLC + + +A +L +MK+ P+ TYN++IR D + L EM
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEA 149
G + T S++ + L +G+++++
Sbjct: 598 SSGFVGDASTISLVTNML-HDGRLDKS 623
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 286 bits (731), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 232/400 (58%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A L ++ G +PN +TY ++ +C++G T +A+ L +M K DAV
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK------IKLDAV 248
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+ IIDGLCK+G +D A L +M+ K D++ Y ++IRGFCYA ++ +L +M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + P+VV FS ++D K GK+ EA +L + MIQ G+ P+ Y +L+DGFC ++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
++A + M S GC N+ +++ILINGYCK I+ L L+ +M +G+ VTYNTL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G E+ ++E A +LF EM V D +Y+ +DGLC NG +ALE+F + K
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
ELDI Y+ +I G+C + ++ AW+LF SLP + DV TYNIMI LC G + +A
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF ME G +P+ +N L+ + + +K +L+ +
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 231 bits (590), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 215/402 (53%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L ++ G +P +IT + L+NGLC G A+ L + M+ E G +P+ V
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV----ETGF--QPNEV 213
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y ++ +CK G A ELL +M+++ I D V Y+ +I G C + A LF EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G + +++ ++ ++ C G+ ++ ++LL MI+ + P+ ++ L+D F G++
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A+EL M G + +Y+ LI+G+CK +++ A + M+SKG P + T+N L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + + ++ +LF +M GV ADT Y T I G C+ G + A ELF+ + +
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
DI SY L+DGLC +G + A E+F + + + D+ YNI+IH +C K+D A D
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV PD +N ++ G + S+ L +M+E
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 214 bits (546), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 208/390 (53%), Gaps = 6/390 (1%)
Query: 14 GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
G N+ T S +IN CR +A + ++I E PD V ++T+I+GLC E
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYE------PDTVTFSTLINGLCLE 155
Query: 74 GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
G V +A EL+ +M + P ++T N+++ G C ++A L M++ G QPN VT+
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
++ +CK+G+ A +LL M + ++ +A Y+ ++DG C G ++ A LF ME
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
G K ++ Y+ LI G+C + L +M+ + I P VV ++ L + ++
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
A +L EM + G++ DT Y + IDG CK + +A + + C +IR+++ LI+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
G CK+ + ELF + ++AD VTYN +I C GK++ A +LF +M ++ V P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
D V++ L+ G N E K +E+ ++++
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 204/373 (54%), Gaps = 8/373 (2%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
A L K++ + + + YS +I+GLC+ G A NLF EM I G K D +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-------FKADII 283
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IYTT+I G C G D +LL M + I PDVV ++++I F EA+ L EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ +G+ P+ VT++ ++D CK ++++A+ +L+LM+ G PN +N L++G+C +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ ELF M G + +Y+ LI G+C+ ++E A L+ EM+S+ ++P +V+Y L
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GL + + E+A ++F+++++ + D Y I G+C + +A +LF +L +
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ D+++Y+ +I GLCK G L A LF + + TYNI+I A +G K+
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Query: 362 LFLDMEAKGVAPD 374
L +++ G + D
Sbjct: 584 LIEEIKRCGFSVD 596
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 194/403 (48%), Gaps = 6/403 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A LF ++ P +I +S L + + RT + L+L ++M E + +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM-----ELKGIAH-NLY 108
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+ +I+ C+ + A + ++ PD VT++++I G C +EA L M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++ G +P ++T + +++ LC NGK+ +A L++ M++ G +PN Y ++ C +G+
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A EL ME K + YSI+I+G CK+ ++ A +L++EM KG K ++ Y TL
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + + KL +M + + D A+ ID K G + EA EL + +
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
D +Y+ LIDG CK +L A + + ++ T+NI+I+ C +D +
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
LF M +GV D V +NTL+ G + EL M R
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 167/324 (51%), Gaps = 7/324 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+ A L + P+V+ +S LI+ + G A L +EMI + G+ PD V
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI----QRGI--SPDTV 353
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YT++IDG CKE +DKA +L M K P++ T+N +I G+C AN ++ LF +M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+GV + VT++ ++ C+ GK+E A +L + M+ VRP+ Y L+DG C G
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+A E+F +E + ++ Y+I+I+G C +++ A L+ + KG+KP V TYN +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GL + + A LF +M+ G + + Y I G ++ +L ++
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW 325
+D + ++D L GRLK ++
Sbjct: 594 SVDASTVKMVVDML-SDGRLKKSF 616
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 144/309 (46%)
Query: 96 VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
V+Y +R ++A LF EM +P ++ FS + + + + + L +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
M G+ N + + +++ C +++ A + +G + + ++S LING C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
+ AL L M+ G KPT++T N L GL +V A L D M G + Y
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
+ +CK+G A+EL R + K +LD YS +IDGLCK G L A+ LF+ +
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
AD++ Y +I C G+ D L DM + + PD VAF+ L+ ++ + +
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 396 ELLHRMDER 404
EL M +R
Sbjct: 338 ELHKEMIQR 346
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 230/400 (57%), Gaps = 6/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L ++ +G +P+ +TY ++N LC++G++ +AL+LF +M N K V
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN------IKASVV 246
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+ +ID LCK+G D A L +M+ K I DVVTY+S+I G C ++ ++ EM
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + P+VVTFS ++D K GK+ EA +L MI G+ P+ YN+L+DGFC +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A ++F M S GC+ ++ +YSILIN YCK K ++ + L+ E+ SKG+ P +TYNTL
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
+G + ++ A +LF EM GV Y +DGLC NG + +ALE+F ++ +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
L I Y+ +I G+C + ++ AW LF SL + DVVTYN+MI LC G + +A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF M+ G PD +N L+ + + VEL+ M
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 239 bits (611), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 219/402 (54%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ P+++T STLINGLC G AL L + M+ E+G +PD V
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV----EYGF--QPDEV 211
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++ LCK G A +L +M+++NI VV Y+ VI C ++A LF EM
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G++ +VVT+S ++ LC +GK ++ +++L MI + P+ ++ L+D F G++
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
AKEL+ M + G + +Y+ LI+G+CK + A ++ M+SKG +P +VTY+ L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
+ +V+ +LF E+ G+ +T Y T + G C++G + A ELF+ +
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ +Y L+DGLC +G L A E+F + + + + YNI+IH +C K+D A
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV PD V +N ++ G + S+ L +M E
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 219 bits (558), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 206/390 (52%), Gaps = 6/390 (1%)
Query: 14 GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
G E ++ T + +IN CR + A ++ + + +PD + ++T+++G C E
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGR------AWKLGYEPDTITFSTLVNGFCLE 153
Query: 74 GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
G V +A L+ +M + PD+VT +++I G C +EA L M++ G QP+ VT+
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
+++ LCK+G A L M + ++ + Y+ ++D C G + A LF ME
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
G K +V +YS LI G C + + + + EM+ + I P VVT++ L + ++
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
A +L++EM G+A DT Y + IDG CK + EA ++F + CE DI +YS LI+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
CK+ R+ LF + LI + +TYN ++ C GK++ A +LF +M ++GV P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
V + L+ G N E +K +E+ +M +
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 200/365 (54%), Gaps = 10/365 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A +LF +++ G + +V+TYS+LI GLC G + EMI N PD V
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN------IIPDVV 316
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
++ +ID KEG + +AKEL +M + I PD +TYNS+I GFC N +EA ++F M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ +G +P++VT+S++++ CK ++++ +L + G+ PN YNTL+ GFC +G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
N AKELF M S G +V +Y IL++G C N E+ AL ++ +M + + YN +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G+ +V+ A+ LF + GV D Y I GLCK G + EA LFR ++ C
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
D +Y+ LI L + EL + AD T ++I L +D ++DK+
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKS-- 613
Query: 362 LFLDM 366
FLDM
Sbjct: 614 -FLDM 617
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 206/404 (50%), Gaps = 8/404 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
+A LF + P I ++ L + + RT + L + M +NG + D
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG-------IEHDM 105
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
T +I+ C++ + A +L + PD +T+++++ GFC +EA L
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M++ +P++VT S +++ LC G++ EA L++ M++ G +P+ Y +++ C +G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
A +LF ME K +V YSI+I+ CK+ + ALSL++EM KGIK VVTY++
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L GL + + K+ EM + D + ID K G ++EA EL+ +
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
D +Y+ LIDG CK L A ++F + D+VTY+I+I++ C ++D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
LF ++ +KG+ P+ + +NTL+LG ++ + + EL M R
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 152/280 (54%), Gaps = 6/280 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L+ ++ G P+ ITY++LI+G C+ A +F+ M++ C+PD
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG------CEPDI 385
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y+ +I+ CK VD L ++ K + P+ +TYN+++ GFC + N AK LF E
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ +GV P+VVT+ +++D LC NG++ +A ++ E M + + +YN ++ G C +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V+ A LF S+ G K +V +Y+++I G CK + A L+ +M G P TYN
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
L + + +L +EM+ G +AD+ + ID L
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 8/302 (2%)
Query: 112 NEAKRLFIEMMDQGVQ----PNVVTFSVIMDELCKNG----KMEEASQLLELMIQIGVRP 163
N F +++++G ++ + E +NG K+ +A L E MIQ P
Sbjct: 9 NRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLP 68
Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
+N L T + + ME G +H++++ +I+IN YC+ K++ A S+
Sbjct: 69 TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
G +P +T++TL G +V A L D M D T I+GLC
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
G + EAL L + + D +Y +++ LCKSG +A +LF + + A VV Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+I+I +LC DG D A LF +ME KG+ D V +++L+ G + + ++L M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 404 RN 405
RN
Sbjct: 309 RN 310
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 143/309 (46%)
Query: 96 VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
++Y +R N+A LF M+ P + F+ + + + + + +
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
M G+ + + +++ +C ++ A + +G + + ++S L+NG+C
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
+ A++L M+ +P +VT +TL GL +V A L D M +G D Y
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
++ LCK+G AL+LFR + + + YS +ID LCK G A LF+ +
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
+ ADVVTY+ +I LC DGK D + +M + + PD V F+ L+ ++ + +
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 396 ELLHRMDER 404
EL + M R
Sbjct: 336 ELYNEMITR 344
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 281 bits (719), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 225/374 (60%), Gaps = 7/374 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A ++ K+ G EP+ +T +L+NG CR A++L ++M+ E G KPD V
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVA 192
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y IID LCK V+ A + +++ K I P+VVTY +++ G C ++ ++A RL +M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ + PNV+T+S ++D KNGK+ EA +L E M+++ + P+ Y++L++G CL R++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
A ++F M S GC +V SY+ LING+CK K +E + L+ EM +G+ VTYNTL
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G F+ V++A + F +M G++ D W Y + GLC NG + +AL +F ++ + +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
LDI +Y+ +I G+CK+G+++ AW LF SL L D+VTY M+ LC G + + L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 363 FLDMEAKGVAP-DC 375
+ M+ +G+ DC
Sbjct: 493 YTKMKQEGLMKNDC 506
Score = 208 bits (530), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 14/372 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A +L K+ G +P+++ Y+ +I+ LC+T A + F+E I G +P+ V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKG-----IRPNVV 226
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YT +++GLC A LL M K I P+V+TY++++ F EAK LF EM
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + P++VT+S +++ LC + +++EA+Q+ +LM+ G + YNTL++GFC RV
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+LF M G N +Y+ LI G+ + +++ A +S+M GI P + TYN L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GL + ++E+A +F++MQ+ + D Y T I G+CK G + EA LF +L +
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ DI +Y+ ++ GLC G L L+ + + L+ + T +DG + + +
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAE 518
Query: 362 LFLDMEAKGVAP 373
L M + G AP
Sbjct: 519 LIKKMLSCGYAP 530
Score = 201 bits (511), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 191/367 (52%), Gaps = 6/367 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
A++LF +M+ P V + ++ + K D L +M+ I D+ T
Sbjct: 69 AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
+N VI FC + A + +M+ G +P+ VT +++ C+ ++ +A L++ M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+IG +P+ YN ++D C T RVN A + F +E G + NV +Y+ L+NG C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A L S+M+ K I P V+TY+ L + +V A +LF+EM R + D Y + I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+GLC + I EA ++F + C D+ SY+ LI+G CK+ R++ +LF + + L+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
++ VTYN +I G +DKA + F M+ G++PD +N L+ G N E K + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 398 LHRMDER 404
M +R
Sbjct: 423 FEDMQKR 429
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 155/293 (52%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
N+A LF +M+ P++V F+ ++ + K K + L + M +G+R + + +N +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC +V+ A + M +G + + + L+NG+C+ + A+SL +M+ G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
KP +V YN + L + +V AF F E++R G+ + Y ++GLC + +A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
L + K ++ +YS L+D K+G++ A ELF + R + D+VTY+ +I+ LC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
++D+A+ +F M +KG D V++NTL+ G + ++L M +R
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 131/231 (56%), Gaps = 6/231 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA LF ++ +P+++TYS+LINGLC A +F+ M++ C D
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG------CLADV 330
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I+G CK V+ +L +M + + + VTYN++I+GF A D ++A+ F +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M G+ P++ T+++++ LC NG++E+A + E M + + + Y T++ G C TG+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
V A LF S+ G K ++ +Y+ +++G C + +LY++M +G+
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 135/257 (52%), Gaps = 3/257 (1%)
Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
K+ +A L M++ P+ +N L+ + + L ME +G ++++++++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
I+IN +C ++ ALS+ +ML G +P VT +L G ++V A L D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
G D AY ID LCK + +A + F+ + ++ +Y+ L++GLC S R A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
L + + + +V+TY+ ++ A +GK+ +A +LF +M + PD V +++L+ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 385 -CI--RNNETSKVVELL 398
C+ R +E +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A F+++ FG P++ TY+ L+ GLC G AL +FE+M + D V
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL------DIV 436
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YTT+I G+CK G V++A L + K + PD+VTY +++ G C +E + L+ +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
+G+ N T S +G + +++L++ M+ G P+
Sbjct: 497 KQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPS 531
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 108/222 (48%)
Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
++N A +LF M ++ ++ L++ K K+ + +SL +M GI+ + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
+ QV A + +M + G D + ++G C+ + +A+ L + +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
+ DI +Y+ +ID LCK+ R+ A++ F + R + +VVTY +++ LC + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
L DM K + P+ + ++ L+ ++N + + EL M
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 279 bits (714), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 220/373 (58%), Gaps = 6/373 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ GC+PN++TY ++NGLC+ G +A NL +M E VV
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV------ 261
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IY+T+ID LCK D A L +M++K + P+V+TY+S+I C ++A RL +M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVVTF+ ++D K GK+ EA +L + MI+ + P+ F Y++L++GFC+ R+
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ AK +F M S C NV +Y+ LING+CK K I+ + L+ EM +G+ VTY TL
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G F+ + A +F +M GV + Y T +DGLCKNG + +A+ +F L+ K
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
E I +Y+ +I+G+CK+G+++ W+LF SL + DV+ YN MI C G ++A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 362 LFLDMEAKGVAPD 374
LF M G PD
Sbjct: 562 LFRKMREDGPLPD 574
Score = 249 bits (636), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 221/402 (54%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A AL ++ G P+ IT++TLI+GL A+ L + M+ C+P+ V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 226
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++GLCK G +D A LL +M+ I +VV Y++VI C ++A LF EM
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++GV+PNV+T+S ++ LC + +AS+LL MI+ + PN +N L+D F G++
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A++L+ M ++F+YS LING+C + ++ A ++ M+SK P VVTYNTL
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +++ +LF EM + G+ +T Y T I G + A +F+ +
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+I +Y+ L+DGLCK+G+L+ A +F L R + + TYNIMI +C GK++ D
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV PD + +NT++ G R + L +M E
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 205/399 (51%), Gaps = 9/399 (2%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
+L K++ G N+ TY+ LIN CR +AL L +M+ E P V +
Sbjct: 106 SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYE------PSIVTLS 159
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
++++G C + A L+ QM + PD +T+ ++I G N ++EA L M+ +
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QPN+VT+ V+++ LCK G ++ A LL M + N +Y+T++D C + A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
LF ME+ G + NV +YS LI+ C + A L S+M+ + I P VVT+N L
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ ++ A KL+DEM + + D + Y + I+G C + + EA +F + C +
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
+ +Y+ LI+G CK+ R+ ELF + + L+ + VTY +IH D A +F
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
M + GV P+ + +NTL+ G +N + K V E L R
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 181/359 (50%), Gaps = 4/359 (1%)
Query: 50 GEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
G FG + K P + ++ + K D L +M+ I+ ++ TYN +I F
Sbjct: 71 GLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
C + + A L +MM G +P++VT S +++ C ++ +A L++ M+++G RP+
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
+ TL+ G L + + A L M GC+ N+ +Y +++NG CK +I+ A +L ++
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
M + I+ VV Y+T+ L + + A LF EM+ GV + Y + I LC
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
+A L + K ++ +++ LID K G+L A +L+ + + + D+ TY+
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+I+ C ++D+A +F M +K P+ V +NTL+ G + + VEL M +R
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A+ L + + PNV+T++ LI+ + G + A L++EMI + PD
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIF 366
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+++I+G C +D+AK + M K+ P+VVTYN++I GFC A +E LF EM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G+ N VT++ ++ + + A + + M+ GV PN YNTL+DG C G++
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+A +F ++ + +++Y+I+I G CK ++E L+ + KG+KP V+ YNT+
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
G E A LF +M+ G D+
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 135/233 (57%), Gaps = 6/233 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L+ ++ +P++ TYS+LING C A ++FE MI+ + C P+
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 400
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I+G CK +D+ EL +M + + + VTY ++I GF A D + A+ +F +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++T++ ++D LCKNGK+E+A + E + + + P + YN +++G C G+
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
V +LF S+ G K +V Y+ +I+G+C+ E A +L+ +M G P
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 151/308 (49%)
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
Y ++R ++ ++A LF M+ P++ F+ ++ + K K + L E M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++G+ N + YN L++ FC +++ A L M +G + ++ + S L+NGYC K I
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A++L +M+ G +P +T+ TL GLF ++ A L D M + G + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+GLCK G I A L + K E ++ YS +ID LCK A LF + +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
+V+TY+ +I LC + A L DM + + P+ V FN L+ ++ + + +L
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 398 LHRMDERN 405
M +R+
Sbjct: 353 YDEMIKRS 360
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 278 bits (711), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 230/401 (57%), Gaps = 10/401 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EAAAL K+ G +V+TY T++NG+C+ G T ALNL +M + KPD
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 296
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
VIY+ IID LCK+G A+ L +M +K I P+V TYN +I GFC ++A+RL +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+++ + P+V+TF+ ++ K GK+ EA +L + M+ + P+ YN+++ GFC R
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+ AK +F M S +V +++ +I+ YC+ K ++ + L E+ +G+ TYNT
Sbjct: 417 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L G E+ + A LF EM HGV DT + G C+N + EALELF +++ K
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
+LD +Y+ +I G+CK ++ AW+LF SLP + DV TYN+MI C + A+
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF M+ G PD +NTL+ GC++ E K +EL+ M
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 214/403 (53%), Gaps = 10/403 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA ALF ++ G P VIT++TLINGLC G + A L +M+ G G D
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKG-----LHIDV 261
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y TI++G+CK G A LL +M++ +I PDVV Y+++I C ++A+ LF E
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+++G+ PNV T++ ++D C G+ +A +LL MI+ + P+ +N L+ G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+ A++L M + +Y+ +I G+CK+ + A ++ M S P VVT+NT
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
+ +V+ +L E+ R G+ A+T Y T I G C+ + A +LF+ +
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
D + + L+ G C++ +L+ A ELF + + D V YNI+IH +C K+D+A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
DLF + GV PD +N ++ G + S L H+M +
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 188/365 (51%), Gaps = 14/365 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A LF+++ G PNV TY+ +I+G C G A L +MI PD +
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 367
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+ +I KEG + +A++L +M + I PD VTYNS+I GFC N ++AK +F
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 424
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D P+VVTF+ I+D C+ +++E QLL + + G+ N YNTL+ GFC +
Sbjct: 425 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
N A++LF M S G + + +IL+ G+C+N+++E AL L+ + I V YN +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G+ + +V+ A+ LF + HGV D Y I G C I +A LF ++
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
E D +Y+ LI G K+G + + EL + D T M+ L DG++DK+
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS-- 660
Query: 362 LFLDM 366
F DM
Sbjct: 661 -FSDM 664
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 167/343 (48%), Gaps = 19/343 (5%)
Query: 77 DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
D A L +M+ + I ++ ++N +I+ FC + + + F ++ G QP+VVTF+ +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 137 MDELCKNGKME---------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ LC ++ EA L + M++IG+ P +NTL++G CL GRV
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A L M G +V +Y ++NG CK + + AL+L S+M IKP VV Y+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
L + A LF EM G+A + + Y IDG C G +A L R + +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
D+ +++ LI K G+L A +L + + D VTYN MI+ C + D A
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+F D+ A +PD V FNT++ R + ++LL + R
Sbjct: 423 MF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 24/309 (7%)
Query: 96 VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
V N VI F N + A L+ +M + + N+ +F++++ C K+ +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
+ ++G +P+ +NTL+ G CL R++ A LF GY
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALF--------------------GYMVETG 206
Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
A++L+ +M+ G+ P V+T+NTL GL +V A L ++M G+ D Y T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
++G+CK G AL L + + D+ YS +ID LCK G A LF +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN---ETS 392
+ +V TYN MI C+ G+ A L DM + + PD + FN L+ ++ E
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 393 KVV-ELLHR 400
K+ E+LHR
Sbjct: 387 KLCDEMLHR 395
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 15/274 (5%)
Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
+++A + M++ A N ++ F R + A L+ ME N++S++I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF------- 258
LI +C ++ +LS + ++ G +P VVT+NTL GL ++ A LF
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 259 --------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
D+M G+ + T I+GLC G ++EA L + +D+ +Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
+++G+CK G K A L + + DVV Y+ +I LC DG A LF +M KG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+AP+ +N ++ G S LL M ER
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 216/371 (58%), Gaps = 9/371 (2%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A ++ K+ FG EP+V+T S+LING C+ A++L +M E G +PD VI
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM----EEMGF--RPDVVI 176
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y TIIDG CK G V+ A EL +M+ + D VTYNS++ G C + ++A RL +M+
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ + PNV+TF+ ++D K GK EA +L E M + V P+ F YN+L++G C+ GRV+
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
AK++ M + GC +V +Y+ LING+CK+K ++ L+ EM +G+ +TYNT+
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G F+ + + A ++F M + Y + GLC N + +AL LF ++ + E
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 413
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
LDI +Y+ +I G+CK G ++ AW+LF SL L DVV+Y MI C + DK+ L
Sbjct: 414 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 473
Query: 363 FLDMEAKGVAP 373
+ M+ G+ P
Sbjct: 474 YRKMQEDGLLP 484
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 221/399 (55%), Gaps = 9/399 (2%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
+LF ++ G ++ +Y+ +IN LCR ++AL++ +M+ +FG +PD V +
Sbjct: 90 SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM----KFGY--EPDVVTVS 143
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
++I+G C+ V A +L+ +M++ PDVV YN++I G C N+A LF M
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
GV+ + VT++ ++ LC +G+ +A++L+ M+ + PN + ++D F G+ + A
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
+L+ M +VF+Y+ LING C + ++ A + M++KG P VVTYNTL G
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ +V+ KLF EM + G+ DT Y T I G + G A E+F + +
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPN 380
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
IR+YS L+ GLC + R++ A LF ++ + + D+ TYNI+IH +C G ++ A DLF
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+ KG+ PD V++ T++ G R + K L +M E
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 183/325 (56%), Gaps = 13/325 (4%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A L +K++ G P+V+ Y+T+I+G C+ G A+ LF+ M GV + DAV
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD----GV--RADAV 210
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++ GLC G A L+ M ++I P+V+T+ +VI F +EA +L+ EM
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ V P+V T++ +++ LC +G+++EA Q+L+LM+ G P+ YNTL++GFC + RV
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ +LF M G + +Y+ +I GY + + A ++S M S +P + TY+ L
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSIL 387
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GL +VE+A LF+ MQ+ + D Y I G+CK G + +A +LFR+L
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWE 326
+ D+ SY+ +I G C+ K W+
Sbjct: 448 KPDVVSYTTMISGFCR----KRQWD 468
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 176/346 (50%), Gaps = 3/346 (0%)
Query: 58 PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
P V ++ ++ + K D L M+ I D+ +YN VI C + A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
+MM G +P+VVT S +++ C+ ++ +A L+ M ++G RP+ +YNT++DG C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
G VN A ELF ME G + + +Y+ L+ G C + A L +M+ + I P V+T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
+ + + + A KL++EM R V D + Y + I+GLC +G + EA ++ +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
C D+ +Y+ LI+G CKS R+ +LF + + L+ D +TYN +I G+ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
A ++F M+++ P+ ++ L+ G N K + L M +
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 159/318 (50%), Gaps = 5/318 (1%)
Query: 92 NPDVVTYNSVIRGFCYANDSN-----EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
NP +V + S G ++ + E LF +M+ P++V FS ++ ++ K+
Sbjct: 26 NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY 85
Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
+ L M G+ + + YN +++ C R A + M G + +V + S L
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
ING+C+ + A+ L S+M G +P VV YNT+ G +I V A +LFD M+R GV
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
AD Y + + GLC +G +A L R + + ++ +++ +ID K G+ A +
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
L+ + R + DV TYN +I+ LC G++D+A + M KG PD V +NTL+ G
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 387 RNNETSKVVELLHRMDER 404
++ + +L M +R
Sbjct: 326 KSKRVDEGTKLFREMAQR 343
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 162/324 (50%)
Query: 81 ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
+L +M P +V ++ V+ + + + LF M G+ ++ +++++++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
C+ + A ++ M++ G P+ ++L++GFC RV A +L ME MG + +V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
Y+ +I+G CK + A+ L+ M G++ VTYN+L GL + A +L +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
M + + + ID K G EA++L+ + + D+ +Y+ LI+GLC GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
+ A ++ + + DVVTYN +I+ C ++D+ LF +M +G+ D + +NT
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
++ G + E+ RMD R
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA + + GC P+V+TY+TLING C++ LF EM + G+V D +
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM----AQRGLV--GDTI 350
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y TII G + G D A+E+ +M + P++ TY+ ++ G C +A LF M
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++ ++ T+++++ +CK G +E+A L + G++P+ Y T++ GFC +
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467
Query: 182 NRAKELFVSMESMG 195
+++ L+ M+ G
Sbjct: 468 DKSDLLYRKMQEDG 481
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%)
Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
+E + L+ +M+ P++V ++ + + + + LF M+ G+ D ++Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
I+ LC+ V AL + + E D+ + S LI+G C+ R+ A +L +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
DVV YN +I C G ++ A +LF ME GV D V +N+L+ G + S
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 396 ELLHRMDERN 405
L+ M R+
Sbjct: 230 RLMRDMVMRD 239
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 234/406 (57%), Gaps = 13/406 (3%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A++ K+ G EP+++T+++LING C A+++ +M+ E G+ KPD V+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV----EMGI--KPDVVM 179
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
YTTIID LCK G V+ A L QM++ I PDVV Y S++ G C + +A L M
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ ++P+V+TF+ ++D K GK +A +L MI++ + PN F Y +L++GFC+ G V+
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
A+++F ME+ GC +V +Y+ LING+CK K+++ A+ ++ EM KG+ +TY TL
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G ++ + A ++F M GV + Y + LC NG + +AL +F ++ K E
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ--KRE 417
Query: 303 LD-----IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
+D I +Y+ L+ GLC +G+L+ A +F + + + ++TY I+I +C GK+
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
A +LF + +KGV P+ V + T++ G R + L +M E
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 189/367 (51%), Gaps = 6/367 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
AL+LF M+ P + +T +++ + K D L ++ ++ D+ T
Sbjct: 56 ALDLFTHMVESRP------LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
N ++ FC ++ A +MM G +P++VTF+ +++ C +MEEA ++ M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++G++P+ +Y T++D C G VN A LF ME+ G + +V Y+ L+NG C +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A SL M + IKP V+T+N L + + A +L++EM R +A + + Y + I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+G C G + EA ++F + C D+ +Y+ LI+G CK ++ A ++F+ + + L
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
+ +TY +I GK + A ++F M ++GV P+ +N L+ N + K + +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 398 LHRMDER 404
M +R
Sbjct: 410 FEDMQKR 416
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 165/307 (53%)
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
Y ++R ++ NEA LF M++ P+++ F+ +++ + K K + L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+GV + + N LM+ FC + + A M +G + ++ +++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A+S+ ++M+ GIKP VV Y T+ L + V A LFD+M+ +G+ D Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+GLC +G +A L R + K + D+ +++ LID K G+ A EL++ + R +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
++ TY +I+ C +G +D+A +F ME KG PD VA+ +L+ G + + +++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 398 LHRMDER 404
+ M ++
Sbjct: 340 FYEMSQK 346
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 150/270 (55%), Gaps = 9/270 (3%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
++A L+ ++ PN+ TY++LING C G A +F M C PD
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG------CFPDV 317
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V YT++I+G CK VD A ++ +M K + + +TY ++I+GF N A+ +F
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAFVYNTLMDGFCL 177
M+ +GV PN+ T++V++ LC NGK+++A + E M + GV PN + YN L+ G C
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
G++ +A +F M + +Y+I+I G CK +++ A++L+ + SKG+KP VVT
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
Y T+ GLF A LF +M+ GV+
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 204 SILINGYCKNKEI----------EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
S + +C +EI AL L++ M+ P+++ + L + ++ + +
Sbjct: 31 SFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV 90
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
L D +Q GV+ D + ++ C++ A + L E DI +++ LI+
Sbjct: 91 VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150
Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
G C R++ A + + + + DVV Y +I +LC +G ++ A LF ME G+ P
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210
Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
D V + +L+ G + LL M +R
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 254 bits (649), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 226/401 (56%), Gaps = 7/401 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ G +P+ +T++TL++GL + A+ L E M+ C+PD V
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLV 216
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +I+GLCK G D A LL +M+ I DVV YN++I G C ++A LF +M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G++P+V T++ ++ LC G+ +AS+LL M++ + P+ +N L+D F G++
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
A++L+ M +S C +V +Y+ LI G+CK K +E + ++ EM +G+ VTY T
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L G F+ + A +F +M GV D Y +DGLC NG + AL +F ++
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
+LDI +Y+ +I+ LCK+G+++ W+LF SL + +VVTY M+ C G ++A
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF++M+ G P+ +NTL+ +R+ + + EL+ M
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 235 bits (600), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 207/378 (54%), Gaps = 7/378 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ GC+P+++TY +INGLC+ G +ALNL +M G E D V
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE------ADVV 251
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IY TIIDGLCK +D A +L +M+ K I PDV TYN +I C ++A RL +M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
+++ + P++V F+ ++D K GK+ EA +L + M++ P+ YNTL+ GFC R
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V E+F M G N +Y+ LI+G+ + ++ + A ++ +M+S G+ P ++TYN
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L GL VE A +F+ MQ+ + D Y T I+ LCK G + + +LF +L +
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
+ ++ +Y+ ++ G C+ G + A LF + + + TYN +I A DG +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 361 DLFLDMEAKGVAPDCVAF 378
+L +M + G A D F
Sbjct: 552 ELIKEMRSCGFAGDASTF 569
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 205/402 (50%), Gaps = 7/402 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A A+ K+ G P+++T ++L+NG C A+ L ++M+ E G +PD V
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV----EMGY--QPDTVT 182
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
+TT++ GL + +A L+ +M K PD+VTY +VI G C + + A L +M
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
++ +VV ++ I+D LCK M++A L M G++P+ F YN L+ C GR +
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPTVVTYNTL 241
A L M ++ ++ LI+ + K ++ A LY EM+ SK P VV YNTL
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +VE ++F EM + G+ +T Y T I G + A +F+ +
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
DI +Y+ L+DGLC +G ++ A +F + + + D+VTY MI ALC GK++ D
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF + KGV P+ V + T+M G R + L M E
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 202/405 (49%), Gaps = 7/405 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A LF + P+++ +S L++ + + + ++L E+M N G+ +
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SHNLY 111
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+ I+ C+ + A +L +M P +VT NS++ GFC+ N +EA L +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++ G QP+ VTF+ ++ L ++ K EA L+E M+ G +P+ Y +++G C G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A L ME + +V Y+ +I+G CK K ++ A L+++M +KGIKP V TYN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILK 300
L + A +L +M + D + ID K G +VEA +L+ ++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
C D+ +Y+ LI G CK R++ E+F + + L+ + VTY +IH D A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
+F M + GV PD + +N L+ G N + + M +R+
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 160/321 (49%), Gaps = 8/321 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A LF K++ G +P+V TY+ LI+ LC G A L +M+ N PD V
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN------INPDLV 321
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
+ +ID KEG + +A++L +M K K+ PDVV YN++I+GFC E +F E
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M +G+ N VT++ ++ + + A + + M+ GV P+ YN L+DG C G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V A +F M+ K ++ +Y+ +I CK ++E L+ + KG+KP VVTY T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
+ G E A LF EM+ G ++ Y T I ++G + EL + +R
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 301 CELDIRSYSCLIDGLCKSGRL 321
D ++ L+ + GRL
Sbjct: 562 FAGDASTFG-LVTNMLHDGRL 581
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 171/330 (51%), Gaps = 1/330 (0%)
Query: 76 VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
+D A L M P +V ++ ++ N + L +M + G+ N+ T+S+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
++ C+ ++ A +L M+++G P+ N+L++GFC R++ A L M MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
+ + +++ L++G ++ + A++L M+ KG +P +VTY + GL + + + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
L ++M++ + AD Y T IDGLCK ++ +A +LF + + D+ +Y+ LI L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPD 374
C GR A L + + D+V +N +I A +GK+ +A L+ +M ++K PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
VA+NTL+ G + + +E+ M +R
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 135/261 (51%)
Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
K+++A L M++ P+ ++ L+ + + L M+++G HN+++YS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
I IN +C+ ++ AL++ +M+ G P++VT N+L G +++ A L D+M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
G DT + T + GL ++ EA+ L + + C+ D+ +Y +I+GLCK G +A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
L + + +G + ADVV YN +I LC MD A DLF ME KG+ PD +N L+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 385 CIRNNETSKVVELLHRMDERN 405
S LL M E+N
Sbjct: 295 LCNYGRWSDASRLLSDMLEKN 315
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 228/435 (52%), Gaps = 31/435 (7%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG------EFGV 54
MEA +F + G +P + TY TL+ G G + L + M+ NG F +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPDHYVFSI 376
Query: 55 -VC-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
+C P+AV Y +I LCK G V+ A QM D+
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 91 INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
++P + YNS+I G C N A+ L +EM+D+G+ N + F+ I+D CK G++ E+
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
+L ELM++IGV+PN YNTL++G+CL G+++ A +L M S+G K N +YS LINGY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
CK +E AL L+ EM S G+ P ++TYN + GLF+ + A +L+ + G +
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
Y + GLCKN +AL++F+ L ++ +L+ R+++ +ID L K GR A +LF +
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
L+ + TY +M + G +++ LFL ME G D N ++ ++ E
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 391 TSKVVELLHRMDERN 405
++ L +DE++
Sbjct: 737 ITRAGTYLSMIDEKH 751
Score = 235 bits (600), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 228/428 (53%), Gaps = 41/428 (9%)
Query: 11 KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
+ G P+V++Y+T+ING + G + A + + EM+ + G++ PD V Y +II L
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML----DRGIL--PDVVTYNSIIAAL 241
Query: 71 CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
CK +DKA E+L M + PD +TYNS++ G+C + EA +M GV+P+V
Sbjct: 242 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDV 301
Query: 131 VTFSVIMDELCKNGKMEEASQ-----------------------------------LLEL 155
VT+S++MD LCKNG+ EA + LL+L
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
M++ G+ P+ +V++ L+ + G+V++A +F M G N +Y +I CK+
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
+E A+ + +M+ +G+ P + YN+L GL ++ ERA +L EM G+ +T + +
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
ID CK G ++E+ +LF + + + ++ +Y+ LI+G C +G++ A +L +
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
L + VTY+ +I+ C +M+ A LF +ME+ GV+PD + +N ++ G + T+
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 396 ELLHRMDE 403
EL R+ E
Sbjct: 602 ELYVRITE 609
Score = 198 bits (503), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 201/393 (51%), Gaps = 9/393 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA K+++ G EP+V+TYS L++ LC+ G + A +F+ M KP+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG------LKPEIT 337
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T++ G +G + + LL M I+PD ++ +I + ++A +F +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
QG+ PN VT+ ++ LCK+G++E+A E MI G+ P VYN+L+ G C +
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
RA+EL + M G N ++ +I+ +CK + + L+ M+ G+KP V+TYNTL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G +++ A KL M G+ +T Y T I+G CK + +AL LF+ +
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
DI +Y+ ++ GL ++ R A EL+ + ++ TYNI++H LC + D A
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 362 LFLDMEAKGVAPDCVAFNTL---MLGCIRNNET 391
+F ++ + + FN + +L RN+E
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 209/444 (47%), Gaps = 51/444 (11%)
Query: 3 AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
A + + ++ G + P++ TY LI CR G + +I + D
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKG------FRVD 121
Query: 60 AVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRL- 117
A+ +T ++ GLC + A +++L+ M + P+V +YN +++G C N S EA L
Sbjct: 122 AIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELL 181
Query: 118 -------------------------------------FIEMMDQGVQPNVVTFSVIMDEL 140
+ EM+D+G+ P+VVT++ I+ L
Sbjct: 182 HMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAAL 241
Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
CK M++A ++L M++ GV P+ YN+++ G+C +G+ A M S G + +V
Sbjct: 242 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDV 301
Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
+YS+L++ CKN A ++ M +G+KP + TY TL G + L D
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
M R+G+ D + + I K G + +A+ +F +R + +Y +I LCKSGR
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
++ A F + L + YN +IH LC K ++A +L L+M +G+ + + FN+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 381 LMLGCIRNN---ETSKVVELLHRM 401
++ + E+ K+ EL+ R+
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRI 505
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 159/318 (50%), Gaps = 4/318 (1%)
Query: 91 INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
+ PD+ TY +I C A + ++ +G + + + F+ ++ LC + + +A
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 151 QL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCKHNVFSYSIL 206
+ L M ++G PN F YN L+ G C R A EL M G +V SY+ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
ING+ K + + A S Y EML +GI P VVTYN++ L + +++A ++ + M ++GV
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
D Y + + G C +G EA+ + +R E D+ +YS L+D LCK+GR A +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
+F S+ + L ++ TY ++ G + + H L M G+ PD F+ L+
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 387 RNNETSKVVELLHRMDER 404
+ + + + + +M ++
Sbjct: 383 KQGKVDQAMLVFSKMRQQ 400
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 6/285 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+E+ LF + G +PNVITY+TLING C G A+ L M++ V KP+
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS------VGLKPNT 546
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y+T+I+G CK ++ A L +M+ ++PD++TYN +++G + AK L++
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+ + G Q + T+++I+ LCKN ++A Q+ + + + ++ A +N ++D GR
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+ AK+LFV+ S G N ++Y ++ +E L+ M G N
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
+ L + ++ RA + + + FID L Y
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 251 bits (642), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 222/393 (56%), Gaps = 5/393 (1%)
Query: 13 FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
FGC + ++ + +++G C+ G ALN +EM N +G F PD + T+++GLCK
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCK 307
Query: 73 EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
G V A E++ M + +PDV TYNSVI G C + EA + +M+ + PN VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
++ ++ LCK ++EEA++L ++ G+ P+ +N+L+ G CLT A ELF M
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
S GC+ + F+Y++LI+ C +++ AL++ +M G +V+TYNTL G + ++
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
A ++FDEM+ HGV+ ++ Y T IDGLCK+ + +A +L + + + D +Y+ L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
C+ G +K A ++ ++ D+VTY +I LC G+++ A L ++ KG+
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
A+N ++ G R +T++ + L M E+N
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 169/299 (56%), Gaps = 15/299 (5%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L L + G P+V T+++LI GLC T + VA+ LFEEM + C+PD
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEF 436
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +ID LC +G +D+A +L QM+ V+TYN++I GFC AN + EA+ +F EM
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
GV N VT++ ++D LCK+ ++E+A+QL++ MI G +P+ + YN+L+ FC G +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+A ++ +M S GC+ ++ +Y LI+G CK +E A L + KGI T YN +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNG--------YIVEALE 291
GLF + A LF EM +++ D +YR GLC G ++VE LE
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 198/434 (45%), Gaps = 45/434 (10%)
Query: 6 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
L +K F EP + Y ++ L R+G + E+M + E G +
Sbjct: 72 LASKKPNFSPEPAL--YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTS------TFLI 123
Query: 66 IIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
+I+ + D+ ++ M D+ + PD YN ++ N + +M
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G++P+V TF+V++ LC+ ++ A +LE M G+ P+ + T+M G+ G ++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE------------------- 225
+ M GC + S +++++G+CK +E AL+ E
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 226 -----------------MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
ML +G P V TYN++ GL ++ +V+ A ++ D+M +
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
+T Y T I LCK + EA EL R L D+ +++ LI GLC + ++A ELF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
+ D TYN++I +LC+ GK+D+A ++ ME G A + +NTL+ G +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 389 NETSKVVELLHRMD 402
N+T + E+ M+
Sbjct: 484 NKTREAEEIFDEME 497
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 147/306 (48%), Gaps = 16/306 (5%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA + +++ GC +VITY+TLI+G C+ T A +F+EM E V + ++V
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-----EVHGVSR-NSV 506
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T+IDGLCK V+ A +L+ QM + PD TYNS++ FC D +A + M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
G +P++VT+ ++ LCK G++E AS+LL + G+ YN ++ G +
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVTYN 239
A LF M E + SY I+ G C I A+ E+L KG P +
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686
Query: 240 TLFIGLFEIHQVERAFKLFDE-MQRHGVAADTWAY-------RTFIDGLCKNGYIVEALE 291
L GL + E KL + MQ+ + + + R F D L G ++++ +
Sbjct: 687 MLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQ 746
Query: 292 LFRTLR 297
RT R
Sbjct: 747 PRRTYR 752
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
DV T+N++I ALC ++ A + DM + G+ PD F T+M G I + + +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 398 LHRMDE 403
+M E
Sbjct: 247 REQMVE 252
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 251 bits (642), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 215/373 (57%), Gaps = 6/373 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
A+ K+ G EP+++T+++L+NG C A+ LF++++ G+ KP+ V
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL------GMGFKPNVV 189
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YTT+I LCK ++ A EL QM P+VVTYN+++ G C +A L +M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
M + ++PNV+TF+ ++D K GK+ EA +L +MIQ+ V P+ F Y +L++G C+ G +
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A+++F ME GC N Y+ LI+G+CK+K +E + ++ EM KG+ +TY L
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + + + A ++F++M D Y +DGLC NG + +AL +F +R +
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+++I +Y+ +I G+CK G+++ A++LF SL + +V+TY MI C G + +A
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 362 LFLDMEAKGVAPD 374
LF M+ G P+
Sbjct: 490 LFKKMKEDGFLPN 502
Score = 214 bits (546), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 207/399 (51%), Gaps = 6/399 (1%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
+LF +++ G P + T + +++ +C + A +M+ E PD V +T
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE------PDLVTFT 157
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
++++G C ++ A L Q+ P+VVTY ++IR C N A LF +M
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G +PNVVT++ ++ LC+ G+ +A+ LL M++ + PN + L+D F G++ A
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
KEL+ M M +VF+Y LING C ++ A ++ M G P V Y TL G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ +VE K+F EM + GV A+T Y I G C G A E+F + + D
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
IR+Y+ L+DGLC +G+++ A +F + + + ++VTY I+I +C GK++ A DLF
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+ +KG+ P+ + + T++ G R + L +M E
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 185/367 (50%), Gaps = 6/367 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
AL+LF M++ P + +T ++ + K D L QM+ I P + T
Sbjct: 67 ALDLFTRMVHSRP------LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
N V+ C ++ A +MM G +P++VTF+ +++ C ++E+A L + ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+G +PN Y TL+ C +N A ELF M + G + NV +Y+ L+ G C+
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A L +M+ + I+P V+T+ L ++ ++ A +L++ M + V D + Y + I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+GLC G + EA ++F + C + Y+ LI G CKS R++ ++F+ + + ++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
A+ +TY ++I C G+ D A ++F M ++ PD +N L+ G N + K + +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 398 LHRMDER 404
M +R
Sbjct: 421 FEYMRKR 427
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 140/273 (51%), Gaps = 6/273 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+AA L + EPNVIT++ LI+ + G + A L+ MI + PD
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ------MSVYPDVF 294
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y ++I+GLC G +D+A+++ M+ P+ V Y ++I GFC + + ++F EM
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+GV N +T++V++ C G+ + A ++ M P+ YN L+DG C G+V
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+A +F M N+ +Y+I+I G CK ++E A L+ + SKG+KP V+TY T+
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
G + A LF +M+ G + Y+
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 158/308 (51%)
Query: 97 TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
+Y ++R + N+A LF M+ P+++ F+ ++ + K + + L E M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
+G+ P N +M CL+ + RA M +G + ++ +++ L+NGYC I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
E A++L+ ++L G KP VVTY TL L + + A +LF++M +G + Y
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
+ GLC+ G +A L R + + E ++ +++ LID K G+L A EL++ + + +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
DV TY +I+ LC G +D+A +F ME G P+ V + TL+ G ++ ++
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 397 LLHRMDER 404
+ + M ++
Sbjct: 350 IFYEMSQK 357
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 129/238 (54%), Gaps = 6/238 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
MEA L+ + P+V TY +LINGLC G A +F ++ NG C P+
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF-YLMERNG-----CYPNE 328
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
VIYTT+I G CK V+ ++ +M K + + +TY +I+G+C + A+ +F +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M + P++ T++V++D LC NGK+E+A + E M + + N Y ++ G C G+
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
V A +LF S+ S G K NV +Y+ +I+G+C+ I A SL+ +M G P Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 213/372 (57%), Gaps = 6/372 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A + K+ G EP+++T+ +L+NG CR AL +F++M+ G+ KP+ VI
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV------GMGYKPNVVI 188
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y TIIDGLCK VD A +LL +M+ I PDVVTYNS+I G C + ++A R+ M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ + P+V TF+ ++D K G++ EA + E MI+ + P+ Y+ L+ G C+ R++
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
A+E+F M S GC +V +YSILINGYCK+K++E + L+ EM +G+ VTY L
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G ++ A ++F M GV + Y + GLC NG I +AL + ++ +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
DI +Y+ +I G+CK+G + AW+++ SL L+ D+ TY M+ L G +A L
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 363 FLDMEAKGVAPD 374
F M+ G+ P+
Sbjct: 489 FRKMKEDGILPN 500
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 208/398 (52%), Gaps = 6/398 (1%)
Query: 6 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
L+ +++ G N+ T + L+N CR +AL+ +MI E P V + +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE------PSIVTFGS 156
Query: 66 IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
+++G C+ V A + QM P+VV YN++I G C + + A L M G
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
+ P+VVT++ ++ LC +G+ +A++++ M + + P+ F +N L+D GRV+ A+
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
E + M ++ +YS+LI G C ++ A ++ M+SKG P VVTY+ L G
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
+ +VE KLF EM + GV +T Y I G C+ G + A E+FR + +I
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
+Y+ L+ GLC +G+++ A + + + + AD+VTYNI+I +C G++ A D++
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+ +G+ PD + T+MLG + + L +M E
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 197 bits (502), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 183/331 (55%), Gaps = 8/331 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
+A +F ++ G +PNV+ Y+T+I+GLC++ AL+L M +G G PD
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG-------PDV 221
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y ++I GLC G A ++ M + I PDV T+N++I +EA+ + E
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ + + P++VT+S+++ LC +++EA ++ M+ G P+ Y+ L++G+C + +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V +LF M G N +Y+ILI GYC+ ++ A ++ M+ G+ P ++TYN
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L GL + ++E+A + +MQ++G+ AD Y I G+CK G + +A +++ +L
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
DI +Y+ ++ GL K G + A LF +
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 187/368 (50%), Gaps = 10/368 (2%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVI--YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
+L+LF M+ C+P I ++ ++ + K D L QM+ I ++
Sbjct: 65 SLDLFFHMVQ--------CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116
Query: 96 VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
T N ++ FC + + A +M+ G +P++VTF +++ C+ ++ +A + +
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
M+ +G +PN +YNT++DG C + +V+ A +L ME G +V +Y+ LI+G C +
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
A + S M + I P V T+N L + +V A + ++EM R + D Y
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
I GLC + EA E+F + C D+ +YS LI+G CKS +++ +LF + +
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
++ + VTY I+I C GK++ A ++F M GV P+ + +N L+ G N + K +
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 396 ELLHRMDE 403
+L M +
Sbjct: 417 VILADMQK 424
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%)
Query: 76 VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
+D + +L M P + ++ ++ + L+ +M G+ N+ T ++
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
+++ C+ ++ A L MI++G P+ + +L++GFC RV A +F M MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
K NV Y+ +I+G CK+K+++ AL L + M GI P VVTYN+L GL + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
++ M + + D + + ID K G + EA E + + + DI +YS LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
C RL A E+F + DVVTY+I+I+ C K++ LF +M +GV +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
V + L+ G R + + E+ RM
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 154/293 (52%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
+++ LF M+ P++ FS ++ + K K + L E M +G+ N N L
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC +++ A M +G + ++ ++ L+NG+C+ + AL ++ +M+ G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
KP VV YNT+ GL + QV+ A L + M++ G+ D Y + I GLC +G +A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
+ + + D+ +++ LID K GR+ A E + + R L D+VTY+++I+ LC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
++D+A ++F M +KG PD V ++ L+ G ++ + ++L M +R
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA +F + + GC P+V+TYS LING C++ + LF EM + GVV + V
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM----SQRGVV--RNTV 362
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YT +I G C+ G ++ A+E+ +M ++P+++TYN ++ G C +A + +M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
G+ ++VT+++I+ +CK G++ +A + + G+ P+ + Y T+M G G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 182 NRAKELFVSMESMG 195
A LF M+ G
Sbjct: 483 READALFRKMKEDG 496
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 135/304 (44%), Gaps = 50/304 (16%)
Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
I GFC++ + + EM+ G+ + K++++ L M+Q
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGI---------------RFMKLDDSLDLFFHMVQCRP 77
Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
P+ ++ L+ + + L+ M+ +G HN+ + +IL+N +C+ ++ ALS
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
+M+ G +P++VT+ +L ++G C
Sbjct: 138 FLGKMIKLGHEPSIVTFGSL-----------------------------------LNGFC 162
Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
+ + +AL +F + + + ++ Y+ +IDGLCKS ++ A +L + + + + DVV
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
TYN +I LC+ G+ A + M + + PD FN L+ C++ S+ E M
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 402 DERN 405
R+
Sbjct: 283 IRRS 286
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 248 bits (634), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 212/369 (57%), Gaps = 6/369 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A ++ K+ G EP+++T+ +L++G C A +L M+ E P+ V+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVV 178
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y T+IDGLCK G ++ A ELL +M+ K + DVVTYN+++ G CY+ ++A R+ +MM
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ + P+VVTF+ ++D K G ++EA +L + MIQ V PN YN++++G C+ GR+
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
AK+ F M S GC NV +Y+ LI+G+CK + ++ + L+ M +G + TYNTL
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G ++ ++ A +F M V D + + GLC NG I AL F +R +
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
+ I +Y+ +I GLCK+ +++ AWELF LP + D TY IMI LC +G +A +L
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 363 FLDMEAKGV 371
M+ +G+
Sbjct: 479 IRRMKEEGI 487
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 202/395 (51%), Gaps = 6/395 (1%)
Query: 9 KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
K++ +G ++ +++ LI+ CR AL++ +M+ E P V + +++
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE------PSIVTFGSLLH 149
Query: 69 GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
G C + A L++ M P+VV YN++I G C + N A L EM +G+
Sbjct: 150 GFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
+VVT++ ++ LC +G+ +A+++L M++ + P+ + L+D F G ++ A+EL+
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
M N +Y+ +ING C + + A + M SKG P VVTYNTL G +
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
V+ KLF M G AD + Y T I G C+ G + AL++F + + DI ++
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
L+ GLC +G ++ A F + +V YNIMIH LC K++KA +LF +
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449
Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+GV PD + ++LG +N + EL+ RM E
Sbjct: 450 EGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 149/298 (50%)
Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
GF ++ +A LF EM+ P++V F+ ++ + E + M G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
+ + + L+ FC R++ A + M +G + ++ ++ L++G+C I A SL
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
M+ G +P VV YNTL GL + ++ A +L +EM++ G+ AD Y T + GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
G +A + R + D+ +++ LID K G L A EL+ + + + + VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
N +I+ LC G++ A F M +KG P+ V +NTL+ G + + ++L RM
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%)
Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
L G+ + E A +L+ EM+ P++V + L + + E +M+ +G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
++ D +++ I C+ + AL + + L E I ++ L+ G C R+ A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
L + + +VV YN +I LC +G+++ A +L +ME KG+ D V +NTL+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 386 IRNNETSKVVELLHRMDERN 405
+ S +L M +R+
Sbjct: 222 CYSGRWSDAARMLRDMMKRS 241
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 245 bits (625), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 195/327 (59%), Gaps = 6/327 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA AL ++ GC+P+++TY ++NGLC+ G T +ALNL +M E VV
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV------ 254
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IY+T+ID LCK D A L +M++K + P+V+TY+S+I C ++A RL +M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PN+VTFS ++D K GK+ +A +L E MI+ + PN F Y++L++GFC+ R+
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
AK++ M C NV +Y+ LING+CK K ++ + L+ EM +G+ VTY TL
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G F+ + A +F +M GV + Y +DGLCKNG + +A+ +F L+
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF 328
E DI +Y+ +I+G+CK+G+ K+ F
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 197/354 (55%), Gaps = 6/354 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A AL ++ G +P+ +T++TLI+GL A+ L + M+ C+PD V
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG------CQPDLV 219
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++GLCK G D A LL +M+ I +VV Y++VI C ++A LF EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++GV+PNV+T+S ++ LC G+ +AS+LL MI+ + PN ++ L+D F G++
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+A++L+ M N+F+YS LING+C + A + M+ K P VVTYNTL
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +V++ +LF EM + G+ +T Y T I G + A +F+ + +
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
+I +Y+ L+DGLCK+G+L A +F L R + D+ TYNIMI +C GK
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 195 bits (495), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 200/395 (50%), Gaps = 9/395 (2%)
Query: 9 KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
K++ G N+ TY+ LIN CR +AL L +M+ E PD V ++++
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYE------PDIVTLNSLLN 156
Query: 69 GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
G C + A L+ QM + PD VT+ ++I G N ++EA L M+ +G QP
Sbjct: 157 GFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP 216
Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
++VT+ +++ LCK G + A LL M + N +Y+T++D C + A LF
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
ME+ G + NV +YS LI+ C A L S+M+ + I P +VT++ L +
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
++ +A KL++EM + + + + Y + I+G C + EA ++ + C ++ +Y
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
+ LI+G CK+ R+ ELF + + L+ + VTY +IH D A +F M +
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
Query: 369 KGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
GV P+ + +N L+ G +N + +K V E L R
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 192/376 (51%), Gaps = 6/376 (1%)
Query: 9 KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
K+ G EP+++T ++L+NG C A+ L ++M+ E G KPD V +TT+I
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV----EMGY--KPDTVTFTTLIH 191
Query: 69 GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
GL +A L+ +M + PD+VTY +V+ G C D++ A L +M ++
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEA 251
Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
NVV +S ++D LCK ++A L M GVRPN Y++L+ C GR + A L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
M N+ ++S LI+ + K ++ A LY EM+ + I P + TY++L G +
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
++ A ++ + M R + Y T I+G CK + + +ELFR + + +Y
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
+ LI G ++ A +F + + +++TYNI++ LC +GK+ KA +F ++
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 369 KGVAPDCVAFNTLMLG 384
+ PD +N ++ G
Sbjct: 492 STMEPDIYTYNIMIEG 507
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 183/365 (50%), Gaps = 4/365 (1%)
Query: 44 EMINGNGEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYN 99
E+ + G FGV+ + P + ++ ++ + K D +M+ I+ ++ TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
+I FC + + A L +MM G +P++VT + +++ C ++ +A L++ M+++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
G +P+ + TL+ G L + + A L M GC+ ++ +Y ++NG CK + + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
L+L ++M + I+ VV Y+T+ L + + A LF EM+ GV + Y + I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
LC G +A L + K ++ ++S LID K G+L A +L+ + + + +
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
+ TY+ +I+ C ++ +A + M K P+ V +NTL+ G + K +EL
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 400 RMDER 404
M +R
Sbjct: 418 EMSQR 422
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 148/308 (48%)
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
Y V+R + ++A LF M P+++ FS ++ + K K + E M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+G+ N + YN L++ FC R++ A L M +G + ++ + + L+NG+C I
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A++L +M+ G KP VT+ TL GLF ++ A L D M + G D Y +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+GLCK G AL L + K E ++ YS +ID LCK A LF + +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
+V+TY+ +I LC G+ A L DM + + P+ V F+ L+ ++ + K +L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 398 LHRMDERN 405
M +R+
Sbjct: 346 YEEMIKRS 353
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 108/190 (56%), Gaps = 6/190 (3%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
++A L+ ++ +PN+ TYS+LING C A + E MI + C P+
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD------CLPNV 393
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I+G CK VDK EL +M + + + VTY ++I GF A D + A+ +F +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++T+++++D LCKNGK+ +A + E + + + P+ + YN +++G C G+
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Query: 181 VNRAKELFVS 190
FV+
Sbjct: 514 WKMGGIYFVA 523
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 196 CKHNVFS------YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
C+ FS Y ++ + E++ A+ L+ M P+++ ++ L + +++
Sbjct: 33 CRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN 92
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
+ + ++M+ G++ + + Y I+ C+ + AL L + L E DI + +
Sbjct: 93 KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152
Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
L++G C R+ A L + D VT+ +IH L K +A L M +
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212
Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
G PD V + ++ G + +T + LL++M+
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME 245
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 241 bits (616), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 217/395 (54%), Gaps = 10/395 (2%)
Query: 9 KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
K+ G P+++T +L+NG C+ A++L + M FG V P+ VIY T+I+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM----DGFGFV--PNVVIYNTVIN 192
Query: 69 GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
GLCK ++ A E+ M+ K I D VTYN++I G + +A RL +M+ + + P
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
NV+ F+ ++D K G + EA L + MI+ V PN F YN+L++GFC+ G + AK +F
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
M S GC +V +Y+ LI G+CK+K +E + L+ EM +G+ TYNTL G +
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
++ A K+F+ M GV+ D Y +D LC NG I +AL + L+ + ++DI +Y
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
+ +I GLC++ +LK AW LF SL R + D + Y MI LC G +A L M+
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492
Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
G P ++ + R++ TS EL+ E
Sbjct: 493 DGFMPSERIYDETL----RDHYTSLSAELIKAAHE 523
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 178/326 (54%), Gaps = 6/326 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA +L + FG PNV+ Y+T+INGLC+ AL +F M + G+ + DAV
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM----EKKGI--RADAV 220
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T+I GL G A LL M + I+P+V+ + ++I F + EA+ L+ EM
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + V PNV T++ +++ C +G + +A + +LM+ G P+ YNTL+ GFC + RV
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+LF M G + F+Y+ LI+GYC+ ++ A +++ M+ G+ P +VTYN L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
L ++E+A + +++Q+ + D Y I GLC+ + EA LFR+L
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWEL 327
+ D +Y +I GLC+ G + A +L
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKL 486
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 178/352 (50%), Gaps = 7/352 (1%)
Query: 38 ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
A +LF EM+ P V +T ++ + K D L +M++ I+ D+ +
Sbjct: 63 AFSLFCEMLQSRP------IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
+ +I FC + + A L +MM G +P++VT +++ C+ + +EA L++ M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
G PN +YNT+++G C +N A E+F ME G + + +Y+ LI+G +
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A L +M+ + I P V+ + L + + A L+ EM R V + + Y + I
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+G C +G + +A +F + C D+ +Y+ LI G CKS R++ +LF + L+
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
D TYN +IH C GK++ A +F M GV+PD V +N ++L C+ NN
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN-ILLDCLCNN 407
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 128/239 (53%), Gaps = 6/239 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L+ ++ PNV TY++LING C G A +F+ M++ C PD
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG------CFPDV 324
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I G CK V+ +L +M + + D TYN++I G+C A N A+++F
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+D GV P++VT+++++D LC NGK+E+A ++E + + + + YN ++ G C T +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
+ A LF S+ G K + +Y +I+G C+ A L M G P+ Y+
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 144/290 (49%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
++A LF EM+ P++V F+ ++ + K K + L M +G+ + + + L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
+ FC R++ A L M +G + ++ + L+NG+C+ + A+SL M G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
P VV YNT+ GL + + A ++F M++ G+ AD Y T I GL +G +A
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
L R + K + ++ ++ LID K G L A L+ + R ++ +V TYN +I+ C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
G + A +F M +KG PD V +NTL+ G ++ ++L M
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 35/238 (14%)
Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
K ++A L M+Q P+ + ++ + + L+ ME++G H+++S++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
ILI+ +C+ + AL+L +M+ G +P++VT +L G + ++ + A L D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
G + Y T +I+GLCK+ L A
Sbjct: 179 GFVPNVVIYNT-----------------------------------VINGLCKNRDLNNA 203
Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
E+F+ + + + AD VTYN +I L G+ A L DM + + P+ + F L+
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%)
Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
+ + A SL+ EML P++V + + + ++++ + L+ +M+ G++ D +++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
I C+ + AL L + L I + L++G C+ R + A L S+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
+ +VV YN +I+ LC + ++ A ++F ME KG+ D V +NTL+ G + +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 395 VELLHRMDER 404
LL M +R
Sbjct: 239 ARLLRDMVKR 248
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 212/392 (54%), Gaps = 6/392 (1%)
Query: 10 LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
L P+V+TY+T++ LC +G A+ + + M+ + C PD + YT +I+
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEA 248
Query: 70 LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
C++ V A +LL +M+D+ PDVVTYN ++ G C +EA + +M G QPN
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
V+T ++I+ +C G+ +A +LL M++ G P+ +N L++ C G + RA ++
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
M GC+ N SY+ L++G+CK K+++ A+ M+S+G P +VTYNT+ L +
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
+VE A ++ +++ G + Y T IDGL K G +A++L +R + D +YS
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
L+ GL + G++ A + FH R + + VT+N ++ LC + D+A D + M +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
G P+ ++ L+ G + +ELL+ +
Sbjct: 549 GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 236 bits (601), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 217/403 (53%), Gaps = 9/403 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+AA + L+ G P+VITY+ +I+G C+ G AL++ + M PD V
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---------SVSPDVV 205
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y TI+ LC G + +A E+L +M ++ PDV+TY +I C + A +L EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D+G P+VVT++V+++ +CK G+++EA + L M G +PN +N ++ C TGR
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A++L M G +V +++ILIN C+ + A+ + +M G +P ++YN L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +++RA + + M G D Y T + LCK+G + +A+E+ L C
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ +Y+ +IDGL K+G+ A +L + L D +TY+ ++ L +GK+D+A
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
F + E G+ P+ V FN++MLG ++ +T + ++ L M R
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 205/371 (55%), Gaps = 8/371 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A + ++ C P+VITY+ LI CR A+ L +EM + C PD V
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG------CTPDVV 275
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++G+CKEG +D+A + L M P+V+T+N ++R C +A++L +M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ +G P+VVTF+++++ LC+ G + A +LE M Q G +PN+ YN L+ GFC ++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+RA E M S GC ++ +Y+ ++ CK+ ++E A+ + +++ SKG P ++TYNT+
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GL + + +A KL DEM+ + DT Y + + GL + G + EA++ F +
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
+ +++ ++ GLCKS + A + L + RG + +Y I+I L +G +A
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK-PNETSYTILIEGLAYEGMAKEAL 574
Query: 361 DLFLDMEAKGV 371
+L ++ KG+
Sbjct: 575 ELLNELCNKGL 585
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 197/378 (52%), Gaps = 11/378 (2%)
Query: 29 LCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
+ RTG E M+ +GN PD + TT+I G C+ G KA ++L ++
Sbjct: 112 MVRTGELEEGFKFLENMVYHGN-------VPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164
Query: 88 DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
PDV+TYN +I G+C A + N A + M V P+VVT++ I+ LC +GK++
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221
Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
+A ++L+ M+Q P+ Y L++ C V A +L M GC +V +Y++L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
NG CK ++ A+ ++M S G +P V+T+N + + + A KL +M R G +
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
+ I+ LC+ G + A+++ + C+ + SY+ L+ G CK ++ A E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
+ D+VTYN M+ ALC DGK++ A ++ + +KG +P + +NT++ G +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 388 NNETSKVVELLHRMDERN 405
+T K ++LL M ++
Sbjct: 462 AGKTGKAIKLLDEMRAKD 479
Score = 158 bits (399), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 145/267 (54%), Gaps = 3/267 (1%)
Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
+ ++ + G++EE + LE M+ G P+ TL+ GFC G+ +A ++ +E G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
+V +Y+++I+GYCK EI ALS+ M + P VVTYNT+ L + ++++A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
+ D M + D Y I+ C++ + A++L +R C D+ +Y+ L++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
K GRL A + + +P +V+T+NI++ ++C+ G+ A L DM KG +P V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
FN L+ R + +++L +M +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQ 372
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 153/309 (49%), Gaps = 3/309 (0%)
Query: 96 VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
V N+ +R + E + M+ G P+++ + ++ C+ GK +A+++LE+
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
+ G P+ YN ++ G+C G +N A + ++ M +V +Y+ ++ C + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
++ A+ + ML + P V+TY L V A KL DEM+ G D Y
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
++G+CK G + EA++ + C+ ++ +++ ++ +C +GR A +L + R
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
VVT+NI+I+ LC G + +A D+ M G P+ +++N L+ G + + + +
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 396 ELLHRMDER 404
E L RM R
Sbjct: 400 EYLERMVSR 408
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 146/272 (53%), Gaps = 6/272 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
M+A L + G P+V+T++ LIN LCR G A+++ E+M C+P++
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG------CQPNS 379
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
+ Y ++ G CKE +D+A E L +M + PD+VTYN+++ C +A + +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+ +G P ++T++ ++D L K GK +A +LL+ M ++P+ Y++L+ G G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V+ A + F E MG + N +++ ++ G CK+++ + A+ M+++G KP +Y
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
L GL + A +L +E+ G+ + A
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 32/248 (12%)
Query: 169 NTLMDGFCLTGRVNR----AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
++ +GFCL + +R +L VS + G S I + +N+ + +S S
Sbjct: 8 SSAQEGFCLIQQFHREYKRGNKLDVSCRTSGS----ISSKIPLGSRKRNRLV--LVSAAS 61
Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIH------QVERAFKLFD-EMQRHGVAADTWAYRTFI 277
++ S G+ + TL G + V +F L D E H +
Sbjct: 62 KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNH------------L 109
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+ + G + E + + DI + LI G C+ G+ + A ++ L +
Sbjct: 110 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 169
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
DV+TYN+MI C G+++ A + M V+PD V +NT++ + + + +E+
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 398 LHRMDERN 405
L RM +R+
Sbjct: 227 LDRMLQRD 234
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 212/383 (55%), Gaps = 13/383 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EAA + ++ G P+ ITY L+NGLC+ G A +LF + KP+ V
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR----------IPKPEIV 354
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
I+ T+I G G +D AK +L M I PDV TYNS+I G+ A + +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M ++G +PNV ++++++D CK GK++EA +L M G++PN +N L+ FC R
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+ A E+F M GCK +V++++ LI+G C+ EI+ AL L +M+S+G+ VTYNT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRIL 299
L +++ A KL +EM G D Y + I GLC+ G + +A LF + LR
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
+I S + LI+GLC+SG ++ A E + D+VT+N +I+ LC G+++
Sbjct: 595 HAPSNI-SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 360 HDLFLDMEAKGVAPDCVAFNTLM 382
+F ++A+G+ PD V FNTLM
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLM 676
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 208/400 (52%), Gaps = 11/400 (2%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A +L + GC PN + Y TLI+ L + AL L EEM F + C PDA
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM------FLMGCVPDAET 289
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
+ +I GLCK +++A +++ +M + PD +TY ++ G C + AK LF +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI- 348
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGRV 181
+P +V F+ ++ +G++++A +L M+ G+ P+ YN+L+ G+ G V
Sbjct: 349 ---PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A E+ M + GCK NV+SY+IL++G+CK +I+ A ++ +EM + G+KP V +N L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
+ H++ A ++F EM R G D + + + I GLC+ I AL L R +
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ +Y+ LI+ + G +K A +L + + D +TYN +I LC G++DKA
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
LF M G AP ++ N L+ G R+ + VE M
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 207/401 (51%), Gaps = 13/401 (3%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
AA +F + + P + T+ ++ C AL+L +M C P++VI
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG------CVPNSVI 254
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y T+I L K V++A +LL +M PD T+N VI G C + NEA ++ M+
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+G P+ +T+ +M+ LCK G+++ A L + +P ++NTL+ GF GR++
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLD 370
Query: 183 RAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
AK + M S G +V +Y+ LI GY K + AL + +M +KG KP V +Y L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G ++ +++ A+ + +EM G+ +T + I CK I EA+E+FR + C
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 302 ELDIRSYSCLIDGLCKSGRLKIA-WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
+ D+ +++ LI GLC+ +K A W L + GV +A+ VTYN +I+A G++ +A
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV-VANTVTYNTLINAFLRRGEIKEAR 549
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
L +M +G D + +N+L+ G R E K L +M
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 159/287 (55%), Gaps = 6/287 (2%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A + ++ GC+PNV +Y+ L++G C+ G A N+ EM + +G KP+ V
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM-SADG-----LKPNTVG 461
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
+ +I CKE + +A E+ +M K PDV T+NS+I G C ++ A L +M+
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+GV N VT++ +++ + G+++EA +L+ M+ G + YN+L+ G C G V+
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
+A+ LF M G + S +ILING C++ +E A+ EM+ +G P +VT+N+L
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
GL ++E +F ++Q G+ DT + T + LCK G++ +A
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 183/402 (45%), Gaps = 48/402 (11%)
Query: 46 INGNGEF-------------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKD-KNI 91
+ NGEF G+V K ++ +I+ K GF + L+L+M++ +
Sbjct: 121 LGANGEFKTIDRLLIQMKDEGIVFKES--LFISIMRDYDKAGFPGQTTRLMLEMRNVYSC 178
Query: 92 NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
P +YN V+ N A +F +M+ + + P + TF V+M C +++ A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
LL M + G PN+ +Y TL+ RVN A +L M MGC + +++ +I G C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF------------- 258
K I A + + ML +G P +TY L GL +I +V+ A LF
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 259 -------------------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
D + +G+ D Y + I G K G + ALE+ +R
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
C+ ++ SY+ L+DG CK G++ A+ + + + L + V +N +I A C + ++ +A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
++F +M KG PD FN+L+ G +E + LL M
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 140/252 (55%), Gaps = 6/252 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA +F ++ GC+P+V T+++LI+GLC AL L +MI+ GVV + V
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTV 530
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T+I+ + G + +A++L+ +M + D +TYNS+I+G C A + ++A+ LF +M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G P+ ++ +++++ LC++G +EEA + + M+ G P+ +N+L++G C GR+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+F +++ G + +++ L++ CK + A L E + G P T++ L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 242 FIGLFEIHQVER 253
+ ++R
Sbjct: 711 LQSIIPQETLDR 722
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 231 bits (590), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 211/383 (55%), Gaps = 10/383 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
EA +K+ G +P+ TY++LI G C+ A +F EM + G C+ +
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG-------CRRNE 288
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V YT +I GLC +D+A +L ++MKD P V TY +I+ C + +EA L E
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M + G++PN+ T++V++D LC K E+A +LL M++ G+ PN YN L++G+C G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+ A ++ MES N +Y+ LI GYCK+ + A+ + ++ML + + P VVTYN+
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L G + A++L M G+ D W Y + ID LCK+ + EA +LF +L
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
++ Y+ LIDG CK+G++ A + + + + +T+N +IH LCADGK+ +A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 361 DLFLDMEAKGVAPDCVAFNTLML 383
L M G+ P V+ +T+++
Sbjct: 588 LLEEKMVKIGLQP-TVSTDTILI 609
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 202/400 (50%), Gaps = 7/400 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA LF K+K C P V TY+ LI LC + ALNL +EM E G+ KP+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM----EETGI--KPNIH 359
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YT +ID LC + +KA+ELL QM +K + P+V+TYN++I G+C +A + M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + PN T++ ++ CK+ + +A +L M++ V P+ YN+L+DG C +G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A L M G + ++Y+ +I+ CK+K +E A L+ + KG+ P VV Y L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G + +V+ A + ++M ++ + I GLC +G + EA L + +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ + + + LI L K G A+ F + D TY I C +G++ A D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
+ M GV+PD +++L+ G +T+ ++L RM
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 198/401 (49%), Gaps = 7/401 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A +F ++ GC N + Y+ LI+GLC A++LF +M + C P
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE------CFPTVRT 325
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
YT +I LC +A L+ +M++ I P++ TY +I C +A+ L +M+
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
++G+ PNV+T++ +++ CK G +E+A ++ELM + PN YN L+ G+C V+
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVH 444
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
+A + M +V +Y+ LI+G C++ + A L S M +G+ P TY ++
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
L + +VE A LFD +++ GV + Y IDG CK G + EA + + C
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
+ +++ LI GLC G+LK A L + + L V T I+IH L DG D A+
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
F M + G PD + T + R +++ +M E
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 196/409 (47%), Gaps = 30/409 (7%)
Query: 22 YSTLINGLCRTG-------------HTIVALNL--FEEMINGNGEFGVV----------- 55
Y+TL+N L R G V N+ + +M+NG + G V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 56 ---CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
PD YT++I G C+ +D A ++ +M K + V Y +I G C A +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
EA LF++M D P V T++V++ LC + + EA L++ M + G++PN Y L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
D C + +A+EL M G NV +Y+ LINGYCK IE A+ + M S+ +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
P TYN L G + V +A + ++M V D Y + IDG C++G A L
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
+ D +Y+ +ID LCKS R++ A +LF SL + + +VV Y +I C
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
GK+D+AH + M +K P+ + FN L+ G + + + L +M
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 203/407 (49%), Gaps = 30/407 (7%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A L ++ G PNVITY+ LING C+ G A+++ E M + P+
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTR 429
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +I G CK V KA +L +M ++ + PDVVTYNS+I G C + + + A RL M
Sbjct: 430 TYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D+G+ P+ T++ ++D LCK+ ++EEA L + + Q GV PN +Y L+DG+C G+V
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A + M S C N +++ LI+G C + +++ A L +M+ G++PTV T L
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
L + + A+ F +M G D Y TFI C+ G +++A ++ +R
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
D+ +YS LI G G+ A+++ + T+ +I L
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL----------- 717
Query: 362 LFLDM---EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
L+M + KG P+ A + +M E VVELL +M E +
Sbjct: 718 --LEMKYGKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHS 755
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 188/372 (50%), Gaps = 2/372 (0%)
Query: 33 GHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
G + L+L +M N + F + K Y T+++ L + G VD+ K++ ++M + +
Sbjct: 157 GDALYVLDLCRKM-NKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215
Query: 93 PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
P++ TYN ++ G+C + EA + ++++ G+ P+ T++ ++ C+ ++ A ++
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
M G R N Y L+ G C+ R++ A +LFV M+ C V +Y++LI C
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
++ AL+L EM GIKP + TY L L + E+A +L +M G+ +
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
Y I+G CK G I +A+++ + K + R+Y+ LI G CKS K L L
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455
Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
R VL DVVTYN +I C G D A+ L M +G+ PD + +++ ++
Sbjct: 456 RKVL-PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 393 KVVELLHRMDER 404
+ +L ++++
Sbjct: 515 EACDLFDSLEQK 526
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 196/397 (49%), Gaps = 27/397 (6%)
Query: 17 PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
P+V+TY++LI+G CR+G+ A L M + G+V PD YT++ID LCK V
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLM----NDRGLV--PDQWTYTSMIDSLCKSKRV 513
Query: 77 DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
++A +L ++ K +NP+VV Y ++I G+C A +EA + +M+ + PN +TF+ +
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
+ LC +GK++EA+ L E M++IG++P L+ G + A F M S G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
K + +Y+ I YC+ + A + ++M G+ P + TY++L G ++ Q AF
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 257 LFDEMQRHGVAADTWAYRTFIDGL---------------CKNGYIVE---ALELFRTLRI 298
+ M+ G + + I L C ++E +EL +
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHALCADGKM 356
+ +SY LI G+C+ G L++A ++F + R G+ +++V +N ++ C K
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV-FNALLSCCCKLKKH 812
Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
++A + DM G P + L+ G + E +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKER 849
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 25/332 (7%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L K+ G +P V T + LI+ L + G A + F++M++ KPDA
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG------TKPDAH 638
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YTT I C+EG + A++++ +M++ ++PD+ TY+S+I+G+ +N A + M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 122 MDQGVQPNVVTFSVIMD---------------ELCKNGKMEE---ASQLLELMIQIGVRP 163
D G +P+ TF ++ ELC M E +LLE M++ V P
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSL 222
NA Y L+ G C G + A+++F M+ + G + ++ L++ CK K+ A +
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
+M+ G P + + L GL++ + ER +F + + G D A++ IDG+ K
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878
Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
G + ELF + C+ ++YS LI+G
Sbjct: 879 QGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 25/263 (9%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
++A + K++ G P++ TYS+LI G G T A ++ + M + C+P
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG------CEPSQ 707
Query: 61 VIYTTIIDGLCKEGF------------------VDKAKELLLQMKDKNINPDVVTYNSVI 102
+ ++I L + + D ELL +M + ++ P+ +Y +I
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 103 RGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
G C + A+++F M ++G+ P+ + F+ ++ CK K EA+++++ MI +G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
P L+ G G R +F ++ G + ++ I+I+G K +E
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 222 LYSEMLSKGIKPTVVTYNTLFIG 244
L++ M G K + TY+ L G
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 231 bits (589), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 218/402 (54%), Gaps = 7/402 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A LF ++K G P+ +TY+++I+G + G + FEEM + + C+PD +
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPDVIT 334
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y +I+ CK G + E +MK + P+VV+Y++++ FC +A + +++M
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+ PN T++ ++D CK G + +A +L M+Q+GV N Y L+DG C R+
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
A+ELF M++ G N+ SY+ LI+G+ K K ++ AL L +E+ +GIKP ++ Y T
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
GL + ++E A + +EM+ G+ A++ Y T +D K+G E L L ++ L E
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHD 361
+ + ++ LIDGLCK+ + A + F+ + L A+ + MI LC D +++ A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
LF M KG+ PD A+ +LM G + + + L +M E
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 200/401 (49%), Gaps = 7/401 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+ F ++K CEP+VITY+ LIN C+ G + L + EM GNG KP+ V
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVV 368
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+T++D CKEG + +A + + M+ + P+ TY S+I C + ++A RL EM
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ GV+ NVVT++ ++D LC +M+EA +L M GV PN YN L+ GF +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+RA EL ++ G K ++ Y I G C ++IE A + +EM GIK + Y TL
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILK 300
F+ L DEM+ + + IDGLCKN + +A++ F R
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
+ + ++ +IDGLCK +++ A LF + + L+ D Y ++ G + +A
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
L M G+ D +A+ +L+ G N+ K L M
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 197 bits (502), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 187/343 (54%), Gaps = 2/343 (0%)
Query: 55 VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
VC P ++ + L G +++A + +MK + P + N ++ F +++
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
KR F +M+ G +P V T+++++D +CK G +E A L E M G+ P+ YN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
F GR++ F M+ M C+ +V +Y+ LIN +CK ++ L Y EM G+KP
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
VV+Y+TL + +++A K + +M+R G+ + + Y + ID CK G + +A L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
+ + E ++ +Y+ LIDGLC + R+K A ELF + +I ++ +YN +IH
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLG--CIRNNETSKVV 395
MD+A +L +++ +G+ PD + + T + G + E +KVV
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 178/389 (45%), Gaps = 6/389 (1%)
Query: 15 CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
C P + L + L G A+ F +M F V P ++ K G
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKM----KRFRVF--PKTRSCNGLLHRFAKLG 241
Query: 75 FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
D K M P V TYN +I C D A+ LF EM +G+ P+ VT++
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301
Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
++D K G++++ E M + P+ YN L++ FC G++ E + M+
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
G K NV SYS L++ +CK ++ A+ Y +M G+ P TY +L +I + A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
F+L +EM + GV + Y IDGLC + EA ELF + ++ SY+ LI G
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
K+ + A EL + L + D++ Y I LC+ K++ A + +M+ G+ +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+ + TLM ++ ++ + LL M E
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 7/292 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA LF K+ G PN+ +Y+ LI+G + + AL L E+ G G KPD +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRG-----IKPDLL 508
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+Y T I GLC ++ AK ++ +MK+ I + + Y +++ + + + E L EM
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+ ++ VVTF V++D LCKN + +A + G++ NA ++ ++DG C +
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V A LF M G + +Y+ L++G K + AL+L +M G+K ++ Y +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
L GL +Q+++A +EM G+ D + + + G I EA+EL
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 135/264 (51%), Gaps = 7/264 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
A L +LK G +P+++ Y T I GLC A + EM E G+ K +++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM----KECGI--KANSL 543
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IYTT++D K G + LL +MK+ +I VVT+ +I G C ++A F +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 122 M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
D G+Q N F+ ++D LCK+ ++E A+ L E M+Q G+ P+ Y +LMDG G
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V A L M +G K ++ +Y+ L+ G +++ A S EM+ +GI P V +
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 723
Query: 241 LFIGLFEIHQVERAFKLFDEMQRH 264
+ +E+ ++ A +L + +H
Sbjct: 724 VLKKHYELGCIDEAVELQSYLMKH 747
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 207/372 (55%), Gaps = 7/372 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A + K+ G EP+++T+ +L+NG C A++L ++++ G+ +P+ VI
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV------GLGYEPNVVI 186
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y TIID LC++G V+ A ++L MK I PDVVTYNS+I ++ + R+ +MM
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+ P+V+TFS ++D K G++ EA + MIQ V PN YN+L++G C+ G ++
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
AK++ + S G N +Y+ LINGYCK K ++ + + M G+ TYNTL+
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G + + A K+ M GV D + + +DGLC +G I +AL L+ K
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
+ I +Y+ +I GLCK+ +++ AW LF SL + DV+TY M+ L +AH+L
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Query: 363 FLDMEAK-GVAP 373
+ M+ + G+ P
Sbjct: 487 YRKMQKEDGLMP 498
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 204/401 (50%), Gaps = 6/401 (1%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
+LF L+ G ++ +++TLI+ CR +AL+ +M+ E P V +
Sbjct: 100 SLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFE------PSIVTFG 153
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
++++G C +A L+ Q+ P+VV YN++I C N A + M
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G++P+VVT++ ++ L +G ++++L M+++G+ P+ ++ L+D + G++ A
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
K+ + M N+ +Y+ LING C + ++ A + + ++SKG P VTYNTL G
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
+ +V+ K+ M R GV DT+ Y T G C+ G A ++ + D
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
+ +++ L+DGLC G++ A L + + ++TYNI+I LC K++ A LF
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
+ KGV+PD + + T+M+G R + EL +M + +
Sbjct: 454 SLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 153/325 (47%)
Query: 77 DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
+ A L M + + P +V ++ ++ N LF + G+ ++ +F+ +
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
+D C+ ++ A L M+++G P+ + +L++GFC R A L + +G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
+ NV Y+ +I+ C+ ++ AL + M GI+P VVTYN+L LF + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
+ +M R G++ D + ID K G ++EA + + + +I +Y+ LI+GLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
G L A ++ + L + VTYN +I+ C ++D + M GV D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
+NTL G + + S ++L RM
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRM 385
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 144/287 (50%)
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
Y +R ++ N+A LF +M + P++V FS ++ + K K E L +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+G+ + + + TL+D FC R++ A M +G + ++ ++ L+NG+C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A+SL +++ G +P VV YNT+ L E QV A + M++ G+ D Y + I
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
L +G + + + + D+ ++S LID K G+L A + ++ + + +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
++VTYN +I+ LC G +D+A + + +KG P+ V +NTL+ G
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 7/234 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA + ++ PN++TY++LINGLC G A + +++ G F P+A
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS-KGFF-----PNA 324
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y T+I+G CK VD ++L M ++ D TYN++ +G+C A + A+++
Sbjct: 325 VTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGR 384
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV P++ TF++++D LC +GK+ +A LE + + YN ++ G C +
Sbjct: 385 MVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKP 233
V A LF S+ G +V +Y ++ G + + A LY +M + G+ P
Sbjct: 445 VEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 225 bits (574), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 212/396 (53%), Gaps = 7/396 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A LF K++ GC PNV+TY+TLI+G C+ L M E P+ +
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE------PNLIS 277
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y +I+GLC+EG + + +L +M + + D VTYN++I+G+C + ++A + EM+
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+ P+V+T++ ++ +CK G M A + L+ M G+ PN Y TL+DGF G +N
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
A + M G +V +Y+ LING+C ++E A+++ +M KG+ P VV+Y+T+
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G + V+ A ++ EM G+ DT Y + I G C+ EA +L+ + +
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
D +Y+ LI+ C G L+ A +L + + ++ DVVTY+++I+ L + +A L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
L + + P V ++TL+ C N E VV L+
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENC-SNIEFKSVVSLI 612
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 203/399 (50%), Gaps = 6/399 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A +F ++ PNV TY+ LI G C G+ VAL LF++M C P+ V
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG------CLPNVVT 242
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y T+IDG CK +D +LL M K + P++++YN VI G C E + EM
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+G + VT++ ++ CK G +A + M++ G+ P+ Y +L+ C G +N
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
RA E M G N +Y+ L++G+ + + A + EM G P+VVTYN L
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G ++E A + ++M+ G++ D +Y T + G C++ + EAL + R + +
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
D +YS LI G C+ R K A +L+ + R L D TY +I+A C +G ++KA L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
+M KGV PD V ++ L+ G + + T + LL ++
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 196/370 (52%), Gaps = 28/370 (7%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
+A + ++ G P+VITY++LI+ +C+ G+ A+ ++M + G +C P+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG------LC-PNE 380
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
YTT++DG ++G++++A +L +M D +P VVTYN++I G C +A + +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M ++G+ P+VV++S ++ C++ ++EA ++ M++ G++P+ Y++L+ GFC R
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
A +L+ M +G + F+Y+ LIN YC ++E AL L++EM+ KG+ P VVTY+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L GL + + A +L ++ Y T I+ C N
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSN----------------- 602
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
++ +S LI G C G + A ++F S+ D YNIMIH C G + KA+
Sbjct: 603 --IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 361 DLFLDMEAKG 370
L+ +M G
Sbjct: 661 TLYKEMVKSG 670
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 198/395 (50%), Gaps = 7/395 (1%)
Query: 11 KAFGCEPNVITYSTLINGLCRTGHTI-VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
+A G P V++Y+ +++ R+ I A N+F+EM+ P+ Y +I G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ------VSPNVFTYNILIRG 214
Query: 70 LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
C G +D A L +M+ K P+VVTYN++I G+C ++ +L M +G++PN
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274
Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
+++++V+++ LC+ G+M+E S +L M + G + YNTL+ G+C G ++A +
Sbjct: 275 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
M G +V +Y+ LI+ CK + A+ +M +G+ P TY TL G +
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
+ A+++ EM +G + Y I+G C G + +A+ + ++ D+ SYS
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
++ G C+S + A + + + D +TY+ +I C + +A DL+ +M
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
G+ PD + L+ + K ++L + M E+
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 182/351 (51%), Gaps = 1/351 (0%)
Query: 55 VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NE 113
+C + ++ ++ + +DKA ++ + P V++YN+V+ + + +
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
A+ +F EM++ V PNV T+++++ C G ++ A L + M G PN YNTL+D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
G+C +++ +L SM G + N+ SY+++ING C+ ++ + +EM +G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
VTYNTL G + +A + EM RHG+ Y + I +CK G + A+E
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
+R+ + R+Y+ L+DG + G + A+ + + VVTYN +I+ C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
GKM+ A + DM+ KG++PD V+++T++ G R+ + + + + M E+
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 137/251 (54%), Gaps = 21/251 (8%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A A+ +K G P+V++YST+++G CR+ AL + EM+ E G+ KPD +
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV----EKGI--KPDTI 486
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+++I G C++ +A +L +M + PD TY ++I +C D +A +L EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-------- 173
+++GV P+VVT+SV+++ L K + EA +LL + P+ Y+TL++
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 174 -------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
GFC+ G + A ++F SM K + +Y+I+I+G+C+ +I A +LY EM
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 227 LSKGIKPTVVT 237
+ G VT
Sbjct: 667 VKSGFLLHTVT 677
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL-----FEEMINGNGEFGVVC 56
+A L ++ G P+V+TYS LINGL + T A L +EE + + + +
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 57 KPDAVI----YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
+ + I ++I G C +G + +A ++ M KN PD YN +I G C A D
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
+A L+ EM+ G + VT ++ L K GK+ E + ++
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 203/361 (56%), Gaps = 6/361 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
A + K+ G EP+++T S+L+NG C + A+ + +M + G+ K D V
Sbjct: 141 SALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM----EKMGI--KRDVV 194
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+ T +ID LCK V A E+L +MKD+ I+P+VVTY+S+I G C + +A+R EM
Sbjct: 195 VDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 254
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + PNV+TFS ++D K GK+ + + ++MIQ+ + PN F Y++L+ G C+ RV
Sbjct: 255 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 314
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A ++ M S GC NV +YS L NG+ K+ ++ + L +M +G+ V+ NTL
Sbjct: 315 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 374
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G F+ +++ A +F M +G+ + +Y + GL NG + +AL F ++ +
Sbjct: 375 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 434
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+LDI +Y+ +I G+CK+ +K A++LF+ L + D Y IMI L G +A
Sbjct: 435 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 494
Query: 362 L 362
L
Sbjct: 495 L 495
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 204/390 (52%), Gaps = 7/390 (1%)
Query: 16 EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
P++ T + L+N CR AL+ +M+ + G+ +PD V +++++G C
Sbjct: 120 SPDLYTCNILVNCFCRCFQPSSALSYLGKMM----KLGI--EPDIVTASSLVNGFCLSNS 173
Query: 76 VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
+ A + QM+ I DVV +I C A + M D+G+ PNVVT+S
Sbjct: 174 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 233
Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
++ LCK+G++ +A + L M + PN ++ L+D + G++++ ++ M M
Sbjct: 234 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 293
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
NVF+YS LI G C + ++ A+ + M+SKG P VVTY+TL G F+ +V+
Sbjct: 294 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 353
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
KL D+M + GVAA+T + T I G + G I AL +F + +IRSY+ ++ GL
Sbjct: 354 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 413
Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
+G ++ A F + + D++TY IMIH +C + +A+DLF ++ K V PD
Sbjct: 414 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 473
Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
A+ T+M+ + + L+R +++
Sbjct: 474 KAY-TIMIAELNRAGMRTEADALNRFYQKH 502
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+ A + ++K G PNV+TYS+LI GLC++G A EM + P+
Sbjct: 210 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK------INPNV 263
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
+ ++ +ID K G + K + M +I+P+V TY+S+I G C N +EA ++
Sbjct: 264 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 323
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ +G PNVVT+S + + K+ ++++ +LL+ M Q GV N NTL+ G+ G+
Sbjct: 324 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 383
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
++ A +F M S G N+ SY+I++ G N E+E ALS + M ++TY
Sbjct: 384 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 443
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
+ G+ + V+ A+ LF +++ V D AY I L + G EA L R
Sbjct: 444 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 497
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 168/349 (48%), Gaps = 3/349 (0%)
Query: 58 PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN---INPDVVTYNSVIRGFCYANDSNEA 114
P V + ++ + K D L ++++ I+PD+ T N ++ FC + A
Sbjct: 83 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142
Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
+MM G++P++VT S +++ C + +++A + M ++G++ + V L+D
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202
Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
C V A E+ M+ G NV +YS LI G CK+ + A EM SK I P
Sbjct: 203 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 262
Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
V+T++ L + ++ + ++ M + + + + Y + I GLC + + EA+++
Sbjct: 263 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 322
Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
+ C ++ +YS L +G KS R+ +L +P+ + A+ V+ N +I G
Sbjct: 323 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 382
Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
K+D A +F M + G+ P+ ++N ++ G N E K + M +
Sbjct: 383 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 431
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 150/312 (48%), Gaps = 3/312 (0%)
Query: 96 VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL--- 152
+ Y V+R + ++A LF+ M P++V F+ ++ + K + L
Sbjct: 51 IDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKR 110
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
+E I + P+ + N L++ FC + + A M +G + ++ + S L+NG+C
Sbjct: 111 IENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 170
Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
+ I+ A+ + +M GIK VV L L + V A ++ M+ G++ +
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230
Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
Y + I GLCK+G + +A + K ++ ++S LID K G+L ++ +
Sbjct: 231 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 290
Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
+ + +V TY+ +I+ LC ++D+A + M +KG P+ V ++TL G +++
Sbjct: 291 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 350
Query: 393 KVVELLHRMDER 404
++LL M +R
Sbjct: 351 DGIKLLDDMPQR 362
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 201/378 (53%), Gaps = 6/378 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA F+++ G P+ + Y+TLI+G C+ G A F EM + + PD +
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD------ITPDVL 387
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YT II G C+ G + +A +L +M K + PD VT+ +I G+C A +A R+ M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G PNVVT++ ++D LCK G ++ A++LL M +IG++PN F YN++++G C +G +
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A +L E+ G + +Y+ L++ YCK+ E++ A + EML KG++PT+VT+N L
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G +E KL + M G+A + + + + C + A +++ +
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
D ++Y L+ G CK+ +K AW LF + V TY+++I K +A +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 362 LFLDMEAKGVAPDCVAFN 379
+F M +G+A D F+
Sbjct: 688 VFDQMRREGLAADKEIFD 705
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 204/389 (52%), Gaps = 9/389 (2%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
A +F + G NV +Y+ +I+ +C+ G A +L M + G PD +
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY-------TPDVI 282
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+T+++G C+ G +DK +L+ MK K + P+ Y S+I C EA+ F EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ QG+ P+ V ++ ++D CK G + AS+ M + P+ Y ++ GFC G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A +LF M G + + +++ LINGYCK ++ A +++ M+ G P VVTY TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GL + ++ A +L EM + G+ + + Y + ++GLCK+G I EA++L
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
D +Y+ L+D CKSG + A E+ + L +VT+N++++ C G ++
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
L M AKG+AP+ FN+L+ CIRNN
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 208/384 (54%), Gaps = 7/384 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH-TIVALNLFEEMINGNGEFGVVCKPDA 60
EA +F K+ +G +V + + + L + + T A+ +F E E GV +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF----PEVGVCW--NV 246
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
Y +I +C+ G + +A LLL M+ K PDV++Y++V+ G+C + ++ +L
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M +G++PN + I+ LC+ K+ EA + MI+ G+ P+ VY TL+DGFC G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+ A + F M S +V +Y+ +I+G+C+ ++ A L+ EM KG++P VT+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L G + ++ AF++ + M + G + + Y T IDGLCK G + A EL + +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
+ +I +Y+ +++GLCKSG ++ A +L L AD VTY ++ A C G+MDKA
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
++ +M KG+ P V FN LM G
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNG 570
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 165/297 (55%), Gaps = 6/297 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA LF ++ G EP+ +T++ LING C+ GH A + MI C P+
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------CSPNV 456
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V YTT+IDGLCKEG +D A ELL +M + P++ TYNS++ G C + + EA +L E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
G+ + VT++ +MD CK+G+M++A ++L+ M+ G++P +N LM+GFCL G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+ ++L M + G N +++ L+ YC ++ A ++Y +M S+G+ P TY
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
L G + ++ A+ LF EM+ G + Y I G K +EA E+F +R
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 191 bits (485), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 208/395 (52%), Gaps = 15/395 (3%)
Query: 11 KAFGCEPNV--ITYSTLIN-GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV-IYTTI 66
K +G +P V + + L++ GL R A +FE+M+N +G+V D+ +Y T
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLRE-----ARRVFEKMLN----YGLVLSVDSCNVYLTR 219
Query: 67 IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
+ C + A + + + + +V +YN VI C EA L + M +G
Sbjct: 220 LSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277
Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
P+V+++S +++ C+ G++++ +L+E+M + G++PN+++Y +++ C ++ A+E
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
F M G + Y+ LI+G+CK +I A + EM S+ I P V+TY + G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
+I + A KLF EM G+ D+ + I+G CK G++ +A + + C ++
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
+Y+ LIDGLCK G L A EL H + + L ++ TYN +++ LC G +++A L +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
EA G+ D V + TLM ++ E K E+L M
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A ++ +ML+ G+ +V + N L + ++ A +F E GV + +Y I
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVI 253
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
+C+ G I EA L + + D+ SYS +++G C+ G L W+L + R L
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
+ Y +I LC K+ +A + F +M +G+ PD V + TL+ G + + +
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 398 LHRMDERN 405
+ M R+
Sbjct: 374 FYEMHSRD 381
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVCKPDA 60
+ L + A G PN T+++L+ C + A ++++M + G G PD
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDG 631
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
Y ++ G CK + +A L +MK K + V TY+ +I+GF EA+ +F +
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
M +G+ + F D K + + ++ +I+
Sbjct: 692 MRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 199/369 (53%), Gaps = 6/369 (1%)
Query: 6 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
L +L FG PNV+ Y+TLI+G C+ G A +LF EM G+ G+V + YT
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM----GKLGLVA--NERTYTV 238
Query: 66 IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
+I+GL K G + E+ +M++ + P++ TYN V+ C + +A ++F EM ++G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
V N+VT++ ++ LC+ K+ EA+++++ M G+ PN YNTL+DGFC G++ +A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
L ++S G ++ +Y+IL++G+C+ + GA + EM +GIKP+ VTY L
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
+E+A +L M+ G+ D Y I G C G + EA LF+++ CE +
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
Y+ +I G CK G A +L + L +V +Y MI LC + K +A L
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 366 MEAKGVAPD 374
M G+ P
Sbjct: 539 MIDSGIDPS 547
Score = 204 bits (520), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 203/384 (52%), Gaps = 6/384 (1%)
Query: 18 NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
+V ++ LI G C G + +L E+ EFG P+ VIYTT+IDG CK+G ++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELT----EFGF--SPNVVIYTTLIDGCCKKGEIE 215
Query: 78 KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
KAK+L +M + + TY +I G + ++ +M + GV PN+ T++ +M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
++LCK+G+ ++A Q+ + M + GV N YNTL+ G C ++N A ++ M+S G
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
N+ +Y+ LI+G+C ++ ALSL ++ S+G+ P++VTYN L G A K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
EM+ G+ Y ID ++ + +A++L ++ L D+ +YS LI G C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
G++ A LF S+ + V YN MI C +G +A L +ME K +AP+ +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
+ ++ + ++ + L+ +M
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKM 539
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 188/346 (54%)
Query: 59 DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
D + +I G C+ G ++K+ +LL+++ + +P+VV Y ++I G C + +AK LF
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
EM G+ N T++V+++ L KNG ++ ++ E M + GV PN + YN +M+ C
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
GR A ++F M G N+ +Y+ LI G C+ ++ A + +M S GI P ++TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
NTL G + ++ +A L +++ G++ Y + G C+ G A ++ + +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
+ +Y+ LID +S ++ A +L S+ L+ DV TY+++IH C G+M++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
A LF M K P+ V +NT++LG + + + ++LL M+E+
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 168/326 (51%), Gaps = 41/326 (12%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLING--------------------------------- 28
+A LF ++ G N TY+ LING
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 29 --LCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
LC+ G T A +F+EM E GV C + V Y T+I GLC+E +++A +++ QM
Sbjct: 276 NQLCKDGRTKDAFQVFDEM----RERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 87 KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
K INP+++TYN++I GFC +A L ++ +G+ P++VT+++++ C+ G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
A+++++ M + G++P+ Y L+D F + + +A +L +SME +G +V +YS+L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
I+G+C ++ A L+ M+ K +P V YNT+ +G + RA KL EM+ +
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 267 AADTWAYRTFIDGLCKNGYIVEALEL 292
A + +YR I+ LCK EA L
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERL 535
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 152/269 (56%), Gaps = 6/269 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A +F +++ G N++TY+TLI GLCR + LN ++++ G+ P+ +
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCRE----MKLNEANKVVDQMKSDGI--NPNLI 339
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T+IDG C G + KA L +K + ++P +VTYN ++ GFC D++ A ++ EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G++P+ VT+++++D ++ ME+A QL M ++G+ P+ Y+ L+ GFC+ G++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
N A LF SM C+ N Y+ +I GYCK AL L EM K + P V +Y +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
L + + + A +L ++M G+ T
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 170/379 (44%), Gaps = 54/379 (14%)
Query: 79 AKELLLQMKDKNINPDVVT--------------------YNSVIRGFCYANDSNEAKRLF 118
A+ LLLQ+ I+ T Y +I + + N + F
Sbjct: 58 AQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYF 117
Query: 119 IEMMDQGVQP----------------------------------NVVTFSVIMDELCKNG 144
EM+D G P +V +F +++ C+ G
Sbjct: 118 NEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAG 177
Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
++E++ LL + + G PN +Y TL+DG C G + +AK+LF M +G N +Y+
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
+LING KN + +Y +M G+ P + TYN + L + + + AF++FDEM+
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
GV+ + Y T I GLC+ + EA ++ ++ ++ +Y+ LIDG C G+L A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
L L L +VTYNI++ C G A + +ME +G+ P V + L+
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 385 CIRNNETSKVVELLHRMDE 403
R++ K ++L M+E
Sbjct: 418 FARSDNMEKAIQLRLSMEE 436
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 33/197 (16%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
+A +L LK+ G P+++TY+ L++G CR G T A + +EM
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 50 -------------------GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
E G+V PD Y+ +I G C +G +++A L M +KN
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLV--PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 91 INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
P+ V YN++I G+C S A +L EM ++ + PNV ++ +++ LCK K +EA
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 151 QLLELMIQIGVRPNAFV 167
+L+E MI G+ P+ +
Sbjct: 534 RLVEKMIDSGIDPSTSI 550
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA+ LF + CEPN + Y+T+I G C+ G + AL L +EM P+
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE------LAPNVA 514
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
Y +I+ LCKE +A+ L+ +M D I+P + + R NDS+ + +
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA---KNDSHVSSK 566
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 227/468 (48%), Gaps = 66/468 (14%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
EA LF ++ G PN +TYS LI+ CR G AL+ EM I
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 47 NGNGEFGVVC--------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
NG+ +FG + +P V YT+++ G C +G ++KA L +M K I
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 93 PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
P + T+ +++ G A +A +LF EM + V+PN VT++V+++ C+ G M +A +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
L+ M + G+ P+ + Y L+ G CLTG+ + AK + C+ N Y+ L++G+C+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
++E ALS+ EM+ +G+ +V Y L G + + F L EM G+ D
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG------------- 319
Y + ID K G EA ++ + C + +Y+ +I+GLCK+G
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 320 -----------------------RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
++ A EL +++ +G L+A+ TYN++I C G++
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG-LLANTATYNMLIRGFCRQGRI 803
Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
++A +L M GV+PDC+ + T++ R N+ K +EL + M E+
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 210/403 (52%), Gaps = 6/403 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA + L +P+V+TY TL+ GLC+ + L + +EM+ + P
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML------CLRFSPSEA 333
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+++++GL K G +++A L+ ++ D ++P++ YN++I C +EA+ LF M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
G++PN VT+S+++D C+ GK++ A L M+ G++ + + YN+L++G C G +
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ A+ M + + V +Y+ L+ GYC +I AL LY EM KGI P++ T+ TL
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GLF + A KLF+EM V + Y I+G C+ G + +A E + +
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
D SY LI GLC +G+ A L +G + + Y ++H C +GK+++A
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+ +M +GV D V + L+ G +++ + LL M +R
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Score = 198 bits (503), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 204/401 (50%), Gaps = 9/401 (2%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A LF + + G P+V Y+ +I LC + L+ +EMI G C + V
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCE----LKDLSRAKEMIAHMEATG--CDVNIVP 264
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y +IDGLCK+ V +A + + K++ PDVVTY +++ G C + + EM+
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
P+ S +++ L K GK+EEA L++ ++ GV PN FVYN L+D C + +
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
A+ LF M +G + N +YSILI+ +C+ +++ ALS EM+ G+K +V YN+L
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
G + + A EM + Y + + G C G I +AL L+ +
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
I +++ L+ GL ++G ++ A +LF+ + + + VTYN+MI C +G M KA +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV---VELLHR 400
+M KG+ PD ++ L+ G + S+ V+ LH+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 182/383 (47%), Gaps = 6/383 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L ++ FG PN+ Y+ LI+ LC+ A LF+ M G+ G+ +P+ V
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM----GKIGL--RPNDV 403
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+ +ID C+ G +D A L +M D + V YNS+I G C D + A+ EM
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ ++P VVT++ +M C GK+ +A +L M G+ P+ + + TL+ G G +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A +LF M K N +Y+++I GYC+ ++ A EM KGI P +Y L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GL Q A D + + + Y + G C+ G + EAL + + +
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+LD+ Y LIDG K K+ + L + L D V Y MI A G +A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
++ M +G P+ V + ++ G
Sbjct: 704 IWDLMINEGCVPNEVTYTAVING 726
Score = 174 bits (442), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 203/411 (49%), Gaps = 47/411 (11%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A L+ ++ G P++ T++TL++GL R G A+ LF EM N KP+ V
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRV 543
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +I+G C+EG + KA E L +M +K I PD +Y +I G C ++EAK +F++
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDG 602
Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV------------------- 161
+ +G + N + ++ ++ C+ GK+EEA + + M+Q GV
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 162 ----------------RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
+P+ +Y +++D TG A ++ M + GC N +Y+
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722
Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV--ERAFKLFDEMQR 263
+ING CK + A L S+M P VTY F+ + +V ++A +L + + +
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC-FLDILTKGEVDMQKAVELHNAILK 781
Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
G+ A+T Y I G C+ G I EA EL + D +Y+ +I+ LC+ +K
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
A EL++S+ + D V YN +IH C G+M KA +L +M +G+ P+
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 171/384 (44%), Gaps = 5/384 (1%)
Query: 22 YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
+ LI R+ + + +F+ MI V P+ + ++ GL K A E
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITK-----VSLLPEVRTLSALLHGLVKFRHFGLAME 213
Query: 82 LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
L M I PDV Y VIR C D + AK + M G N+V ++V++D LC
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
K K+ EA + + + ++P+ Y TL+ G C E+ M + +
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333
Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
+ S L+ G K +IE AL+L ++ G+ P + YN L L + + A LFD M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
+ G+ + Y ID C+ G + AL + +L + Y+ LI+G CK G +
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
A + L VVTY ++ C+ GK++KA L+ +M KG+AP F TL
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
+ G R V+L + M E N
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWN 537
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 145/304 (47%), Gaps = 31/304 (10%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
EA L CE N I Y+ L++G CR G AL++ +EM+ + +VC
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 57 ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
KPD VIYT++ID K G +A + M ++
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 93 PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG-KMEEASQ 151
P+ VTY +VI G C A NEA+ L +M PN VT+ +D L K M++A +
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
L +++ G+ N YN L+ GFC GR+ A EL M G + +Y+ +IN C
Sbjct: 775 LHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
+ +++ A+ L++ M KGI+P V YNTL G ++ +A +L +EM R G+ +
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Query: 272 AYRT 275
RT
Sbjct: 894 TSRT 897
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 103/260 (39%), Gaps = 53/260 (20%)
Query: 195 GCKHNVFSYSILING--------------------------------------------- 209
G H+ S+ ILI+
Sbjct: 99 GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSS 158
Query: 210 -------YCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
Y +++ + + ++ M++K + P V T + L GL + A +LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
G+ D + Y I LC+ + A E+ + C+++I Y+ LIDGLCK ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
A + L L DVVTY +++ LC + + ++ +M +P A ++L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 382 MLGCIRNNETSKVVELLHRM 401
+ G + + + + L+ R+
Sbjct: 339 VEGLRKRGKIEEALNLVKRV 358
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 211/383 (55%), Gaps = 6/383 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A LF ++ A P++ITY+TLI+G C+ G+ + + E M + E P +
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE------PSLI 285
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+ T++ GL K G V+ A+ +L +MKD PD T++ + G+ + A ++
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+D GV+ N T S++++ LCK GK+E+A ++L + G+ PN +YNT++DG+C G +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A+ +ME G K + +Y+ LI +C+ E+E A ++M KG+ P+V TYN L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G ++ ++ F + EM+ +G + +Y T I+ LCK ++EA + R +
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+R Y+ LIDG C G+++ A+ + + + ++VTYN +I L GK+ +A D
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
L L++ KG+ PD +N+L+ G
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISG 608
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 6/381 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EAA LF L+ G P+ + + L++ L +T V +N+F ++ + +P
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD------FRPSKF 180
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+Y I K V K EL +MK I P V YN +I G C N+A++LF EM
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + P+++T++ ++D CK G E++ ++ E M + P+ +NTL+ G G V
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A+ + M+ +G + F++SIL +GY N++ E AL +Y + G+K T + L
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
L + ++E+A ++ G+ + Y T IDG C+ G +V A +
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ D +Y+CLI C+ G ++ A + + + + V TYNI+I + DK D
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
+ +ME G P+ V++ TL+
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLI 501
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 198/391 (50%), Gaps = 10/391 (2%)
Query: 14 GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
G + N T S L+N LC+ G A EE++ G+V P+ VIY T+IDG C++
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKA----EEILGREMAKGLV--PNEVIYNTMIDGYCRK 402
Query: 74 GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
G + A+ + M+ + + PD + YN +IR FC + A++ +M +GV P+V T+
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
++++ + + ++ +L+ M G PN Y TL++ C ++ A+ + ME
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
G V Y++LI+G C +IE A EML KGI+ +VTYNTL GL ++
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
A L E+ R G+ D + Y + I G G + + L+ ++ + +++Y LI
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI- 641
Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
LC +++ LF + L D++ YN ++H G M+KA +L M K +
Sbjct: 642 SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
D +N+L+LG ++ + +V L+ M+ R
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 201/426 (47%), Gaps = 34/426 (7%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFE------------------ 43
+A + + A G PN + Y+T+I+G CR G + A E
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Query: 44 -------EMINGNGEFGVV----CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
EM N E + P Y +I G ++ DK ++L +M+D
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 93 PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
P+VV+Y ++I C + EA+ + +M D+GV P V +++++D C GK+E+A +
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
+ M++ G+ N YNTL+DG +TG+++ A++L + + G K +VF+Y+ LI+GY
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
++ ++LY EM GIKPT+ TY+ L I L +E +LF EM + D
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEMS---LKPDLLV 667
Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
Y + +G + +A L + + LD +Y+ LI G K G+L L +
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMN 727
Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
+ + TYNI++ C A+ + +M+ KG D N L+ G ++ S
Sbjct: 728 AREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG-LKEEWRS 786
Query: 393 KVVELL 398
K E++
Sbjct: 787 KEAEIV 792
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 38/364 (10%)
Query: 9 KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
K+K G P+V TY+ LI G R ++ +EM NG P+ V Y T+I+
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM-EDNGTM-----PNVVSYGTLIN 502
Query: 69 GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
LCK + +A+ + M+D+ ++P V YN +I G C +A R EM+ +G++
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
N+VT++ ++D L GK+ EA LL + + G++P+ F YN+L+ G+ G V R L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 189 VSMESMGCKHNVFSYSILI---------------------------NG----YCKNKEIE 217
M+ G K + +Y +LI NG Y + ++E
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A +L +M+ K I TYN+L +G ++ ++ L DEM + + Y +
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
G C+ + A +R ++ LD+ + L+ GL + R K A E+ S G ++
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA-EIVISEMNGRML 801
Query: 338 ADVV 341
DV
Sbjct: 802 GDVT 805
Score = 131 bits (329), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 147/279 (52%)
Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
+EA LF + ++G+ P+ + ++++D L K + + +++ RP+ F+Y
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
+ V + ELF M+ +VF Y++LI+G CK K + A L+ EML++ +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
P+++TYNTL G + E++FK+ + M+ + + T + GL K G + +A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
+ + ++ L D ++S L DG + + + A ++ + + + T +I+++ALC
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
+GK++KA ++ AKG+ P+ V +NT++ G R +
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 10/280 (3%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA + ++ G P V Y+ LI+G C G A +EM+ E +V
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT---- 566
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
Y T+IDGL G + +A++LLL++ K + PDV TYNS+I G+ +A + L+ E
Sbjct: 567 --YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M G++P + T+ +++ LC +E +L ++ ++P+ VYN ++ + + G
Sbjct: 625 MKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFG---EMSLKPDLLVYNGVLHCYAVHGD 680
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+ +A L M + +Y+ LI G K ++ SL EM ++ ++P TYN
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
+ G E+ A+ + EMQ G D + GL
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 102/211 (48%)
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
++ A +LF ++ + G + S ++L++ K K+ ++++ +L +P+ Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
++ V + +LF+ M+ + + Y IDGLCK + +A +LF + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
+ +Y+ LIDG CK+G + ++++ + + ++T+N ++ L G ++ A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
++ +M+ G PD F+ L G N +
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 9/225 (4%)
Query: 184 AKELF--VSMESMGCKHNVFSY---SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
KELF S+ S KH+ FSY S+L+N ++K I A L+ + ++GI P+ +
Sbjct: 92 PKELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSL 147
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
L L + Q +F + + Y I K + + LELF ++
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207
Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
+ + Y+ LIDGLCK R+ A +LF + L+ ++TYN +I C G +K
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267
Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+ + M+A + P + FNTL+ G + +L M +
Sbjct: 268 SFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 208/397 (52%), Gaps = 6/397 (1%)
Query: 5 ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
L +++ G +PNV T++ I L R G A + + M + C PD V YT
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGPDVVTYT 297
Query: 65 TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
+ID LC +D AKE+ +MK PD VTY +++ F D + K+ + EM
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G P+VVTF++++D LCK G EA L++M G+ PN YNTL+ G R++ A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
ELF +MES+G K ++Y + I+ Y K+ + AL + +M +KGI P +V N
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
L + + A ++F ++ G+ D+ Y + K G I EA++L + CE D
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
+ + LI+ L K+ R+ AW++F + L VVTYN ++ L +GK+ +A +LF
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
M KG P+ + FNTL +N+E + +++L +M
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 200/402 (49%), Gaps = 6/402 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A K++ FG N +Y+ LI+ L ++ A+ ++ MI +P
Sbjct: 171 QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG------FRPSLQ 224
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y++++ GL K +D LL +M+ + P+V T+ IR A NEA + M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D+G P+VVT++V++D LC K++ A ++ E M +P+ Y TL+D F +
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ K+ + ME G +V +++IL++ CK A M +GI P + TYNTL
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
GL +H+++ A +LF M+ GV + Y FID K+G V ALE F ++
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+I + + + L K+GR + A ++F+ L L+ D VTYN+M+ G++D+A
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
L +M G PD + N+L+ + + + ++ RM E
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 202/421 (47%), Gaps = 42/421 (9%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA + ++ GC P+V+TY+ LI+ LC A +FE+M G KPD V
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH------KPDRV 329
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T++D +D K+ +M+ PDVVT+ ++ C A + EA M
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-------- 173
DQG+ PN+ T++ ++ L + ++++A +L M +GV+P A+ Y +D
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 174 ---------------------------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
GR AK++F ++ +G + +Y+++
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
+ Y K EI+ A+ L SEM+ G +P V+ N+L L++ +V+ A+K+F M+ +
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
Y T + GL KNG I EA+ELF + C + +++ L D LCK+ + +A +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
+ + + DV TYN +I L +G++ +A F M+ K V PD V TL+ G +
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVV 688
Query: 387 R 387
+
Sbjct: 689 K 689
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 177/344 (51%), Gaps = 9/344 (2%)
Query: 3 AAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
A LF K K G +P + TY+ LI GL +A ++F + + G C PD
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ-VKSTG-----CIPDVA 821
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y ++D K G +D+ EL +M + +T+N VI G A + ++A L+ ++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 122 M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M D+ P T+ ++D L K+G++ EA QL E M+ G RPN +YN L++GF G
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+ A LF M G + ++ +YS+L++ C ++ L + E+ G+ P VV YN
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 241 LFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
+ GL + H++E A LF+EM+ G+ D + Y + I L G + EA +++ ++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
E ++ +++ LI G SG+ + A+ ++ ++ G + TY
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 46/444 (10%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+ A F K+K G PN++ + + L + G A +F G + G+V PD+
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY----GLKDIGLV--PDS 503
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y ++ K G +D+A +LL +M + PDV+ NS+I A+ +EA ++F+
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M + ++P VVT++ ++ L KNGK++EA +L E M+Q G PN +NTL D C
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V A ++ M MGC +VF+Y+ +I G KN +++ A+ + +M K + P VT T
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCT 682
Query: 241 LFIGLFEIHQVERAFK---------------LFDE------MQRHGVA-ADTWAYRTFID 278
L G+ + +E A+K LF E + G+ A +++ R +
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742
Query: 279 GLCKNG---------------YIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLK 322
G+C++G + A LF + L + + +Y+ LI GL ++ ++
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802
Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
IA ++F + I DV TYN ++ A GK+D+ +L+ +M + + N ++
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 383 LGCIRNNETSKVVELLHR-MDERN 405
G ++ ++L + M +R+
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRD 886
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 193/383 (50%), Gaps = 24/383 (6%)
Query: 18 NVITYST--LINGLCRTGHTIV---------------ALNLFEEMINGNGEFGVVCKPDA 60
N +++S + NG+CR G +I+ A LFE+ + GV +P
Sbjct: 731 NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK---DLGV--QPKL 785
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
Y +I GL + ++ A+++ LQ+K PDV TYN ++ + + +E L+ E
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTG 179
M + N +T ++++ L K G +++A L +LM P A Y L+DG +G
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905
Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
R+ AK+LF M GC+ N Y+ILING+ K E + A +L+ M+ +G++P + TY+
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
L L + +V+ F E++ G+ D Y I+GL K+ + EAL LF ++
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 300 K-CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
+ D+ +Y+ LI L +G ++ A ++++ + R L +V T+N +I GK +
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 359 AHDLFLDMEAKGVAPDCVAFNTL 381
A+ ++ M G +P+ + L
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 209/440 (47%), Gaps = 48/440 (10%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA LF + GC PN IT++TL + LC+ +AL + +M++ + C PD
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD------MGCVPDVF 644
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA------------- 108
Y TII GL K G V +A QMK K + PD VT +++ G A
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 109 --NDSNEAKRLFIE------MMDQGVQPNVVTFS-----------------VIMDELCKN 143
N +++ LF E + + G+ N V+FS I+ CK+
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKH 762
Query: 144 GKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
+ A L E + +GV+P YN L+ G + A+++F+ ++S GC +V +
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF-DEM 261
Y+ L++ Y K+ +I+ LY EM + + +T+N + GL + V+ A L+ D M
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
+ Y IDGL K+G + EA +LF + C + Y+ LI+G K+G
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
A LF + + + D+ TY++++ LC G++D+ F +++ G+ PD V +N +
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 382 MLGCIRNNETSKVVELLHRM 401
+ G +++ + + L + M
Sbjct: 1003 INGLGKSHRLEEALVLFNEM 1022
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 200/421 (47%), Gaps = 47/421 (11%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A + K+ GC P+V TY+T+I GL + G A+ F +M + PD V
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-------LVYPDFVT 679
Query: 63 YTTIIDGLCKEGFVDKAKEL----LLQMKDKNIN----------------PDVVTYN--- 99
T++ G+ K ++ A ++ L D+ N + V+++
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739
Query: 100 --------------SVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSVIMDELCKNG 144
+IR C N+ + A+ LF + D GVQP + T+++++ L +
Sbjct: 740 VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
+E A + + G P+ YN L+D + +G+++ EL+ M + C+ N +++
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 205 ILINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
I+I+G K ++ AL LY +++S + PT TY L GL + ++ A +LF+ M
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
+G + Y I+G K G A LF+ + D+++YS L+D LC GR+
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME-AKGVAPDCVAFNTLM 382
F L L DVV YN++I+ L ++++A LF +M+ ++G+ PD +N+L+
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Query: 383 L 383
L
Sbjct: 1040 L 1040
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 167/347 (48%), Gaps = 9/347 (2%)
Query: 42 FEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNS 100
F E + NG +C+ I II CK V A+ L + KD + P + TYN
Sbjct: 735 FSERLVANG----ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790
Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
+I G A+ A+ +F+++ G P+V T++ ++D K+GK++E +L + M
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGA 219
N +N ++ G G V+ A +L+ M +Y LI+G K+ + A
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
L+ ML G +P YN L G + + + A LF M + GV D Y +D
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970
Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL--PRGVLI 337
LC G + E L F+ L+ D+ Y+ +I+GL KS RL+ A LF+ + RG+
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI-T 1029
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
D+ TYN +I L G +++A ++ +++ G+ P+ FN L+ G
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 174/381 (45%), Gaps = 11/381 (2%)
Query: 10 LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-----------GVVCKP 58
LK+F + +Y + G HT N E + +G+ + K
Sbjct: 92 LKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKR 151
Query: 59 DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
D Y TI L +G + +A L +M++ + +YN +I + EA ++
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
M+ +G +P++ T+S +M L K ++ LL+ M +G++PN + + +
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
G++N A E+ M+ GC +V +Y++LI+ C ++++ A ++ +M + KP VTY
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
TL + ++ + + EM++ G D + +D LCK G EA + +R
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
++ +Y+ LI GL + RL A ELF ++ + TY + I G
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 359 AHDLFLDMEAKGVAPDCVAFN 379
A + F M+ KG+AP+ VA N
Sbjct: 452 ALETFEKMKTKGIAPNIVACN 472
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 7/226 (3%)
Query: 17 PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
P TY LI+GL ++G A LFE M+ ++G C+P+ IY +I+G K G
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGML----DYG--CRPNCAIYNILINGFGKAGEA 942
Query: 77 DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
D A L +M + + PD+ TY+ ++ C +E F E+ + G+ P+VV +++I
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 137 MDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
++ L K+ ++EEA L E+ G+ P+ + YN+L+ + G V A +++ ++ G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ NVF+++ LI GY + + E A ++Y M++ G P TY L
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 7/208 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA LF + +GC PN Y+ LING + G A LF+ M+ + GV +PD
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV----KEGV--RPDLK 962
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+ ++D LC G VD+ ++K+ +NPDVV YN +I G ++ EA LF EM
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 122 -MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+G+ P++ T++ ++ L G +EEA ++ + + G+ PN F +N L+ G+ L+G+
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILIN 208
A ++ +M + G N +Y L N
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 219/436 (50%), Gaps = 41/436 (9%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A ++ ++ G NV T + ++N LC+ G + + F + G + PD V
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGK-MEKVGTFLSQVQEKGVY-----PDIVT 272
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y T+I +G +++A EL+ M K +P V TYN+VI G C AK +F EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+ P+ T+ ++ E CK G + E ++ M V P+ ++++M F +G ++
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
+A F S++ G + Y+ILI GYC+ I A++L +EML +G VVTYNT+
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
GL + + A KLF+EM + D++ IDG CK G + A+ELF+ ++ +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
LD+ +Y+ L+DG K G + A E++ + ++ ++Y+I+++ALC+ G + +A +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 363 FLDMEAK-----------------------------------GVAPDCVAFNTLMLGCIR 387
+ +M +K G PDC+++NTL+ G +R
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 388 NNETSKVVELLHRMDE 403
SK L+ +M+E
Sbjct: 633 EENMSKAFGLVKKMEE 648
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 202/405 (49%), Gaps = 8/405 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L + G P V TY+T+INGLC+ G A +F EM+ PD+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG------LSPDST 341
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +++ CK+G V + +++ M+ +++ PD+V ++S++ F + + ++A F +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G+ P+ V +++++ C+ G + A L M+Q G + YNT++ G C +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A +LF M + ++ +ILI+G+CK ++ A+ L+ +M K I+ VVTYNTL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G ++ ++ A +++ +M + +Y ++ LC G++ EA ++ +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ + + +I G C+SG + + D ++YN +I+ + M KA
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 362 LFLDMEAK--GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
L ME + G+ PD +N+++ G R N+ + +L +M ER
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 191/376 (50%), Gaps = 8/376 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+E +F+ +++ P+++ +S++++ R+G+ AL F N E G++ PD
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF----NSVKEAGLI--PDN 410
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
VIYT +I G C++G + A L +M + DVVTYN+++ G C EA +LF E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M ++ + P+ T ++++D CK G ++ A +L + M + +R + YNTL+DGF G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
++ AKE++ M S SYSIL+N C + A ++ EM+SK IKPTV+ N+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
+ G ++M G D +Y T I G + + +A L + + +
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 301 CEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
L D+ +Y+ ++ G C+ ++K A + + + D TY MI+ + + +
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 359 AHDLFLDMEAKGVAPD 374
A + +M +G +PD
Sbjct: 711 AFRIHDEMLQRGFSPD 726
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 151/307 (49%)
Query: 98 YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
++ +IR + A EA F + +G ++ + ++ L + G +E A + + +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+ GV N + N +++ C G++ + ++ G ++ +Y+ LI+ Y +E
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A L + M KG P V TYNT+ GL + + ERA ++F EM R G++ D+ YR+ +
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
CK G +VE ++F +R D+ +S ++ +SG L A F+S+ LI
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
D V Y I+I C G + A +L +M +G A D V +NT++ G + + +L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 398 LHRMDER 404
+ M ER
Sbjct: 468 FNEMTER 474
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 198/383 (51%), Gaps = 8/383 (2%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA ++K G E +++ Y++LI G C G LF+E++ P A+
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS------PCAI 283
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y T+I G CK G + +A E+ M ++ + P+V TY +I G C + EA +L M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ +PN VT+++I+++LCK+G + +A +++ELM + RP+ YN L+ G C G +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 182 NRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
+ A +L M +S +V SY+ LI+G CK + AL +Y ++ K VT N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
L + V +A +L+ ++ + ++ Y IDG CK G + A L +R+
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
+ + + Y+CL+ LCK G L AW LF + R DVV++NIMI G + A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 360 HDLFLDMEAKGVAPDCVAFNTLM 382
L + M G++PD ++ L+
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLI 606
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 211/437 (48%), Gaps = 43/437 (9%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A +L +++ P+V +Y+T+I G C AL L EM G+G C V
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-KGSG-----CSWSLV 213
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+ +ID CK G +D+A L +MK + D+V Y S+IRGFC + + K LF E+
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++G P +T++ ++ CK G+++EAS++ E MI+ GVRPN + Y L+DG C G+
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A +L M + N +Y+I+IN CK+ + A+ + M + +P +TYN L
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKN---------------- 283
GL ++ A KL M + D +Y I GLCK
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 284 -------------------GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
G + +A+EL++ + K + +Y+ +IDG CK+G L +A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
L + L V YN ++ +LC +G +D+A LF +M+ PD V+FN ++ G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 385 CIRNNETSKVVELLHRM 401
++ + LL M
Sbjct: 574 SLKAGDIKSAESLLVGM 590
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 186/343 (54%), Gaps = 2/343 (0%)
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
+ ++ GLC+ KA LL +M+ ++ PDV +YN+VIRGFC + +A L EM
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G ++VT+ +++D CK GKM+EA L+ M +G+ + VY +L+ GFC G ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
R K LF + G +Y+ LI G+CK +++ A ++ M+ +G++P V TY L
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
GL + + + A +L + M + Y I+ LCK+G + +A+E+ ++ +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHALCADGKMDKAH 360
D +Y+ L+ GLC G L A +L + + + DV++YN +IH LC + ++ +A
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
D++ + K A D V N L+ ++ + +K +EL ++ +
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 198/406 (48%), Gaps = 43/406 (10%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA+ +F + G PNV TY+ LI+GLC G T AL L MI + E P+AV
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE------PNAV 353
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y II+ LCK+G V A E++ MK + PD +TYN ++ G C D +EA +L M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 122 MDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
+ P+V++++ ++ LCK ++ +A + +L+++ + N L++ G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
VN+A EL+ + N +Y+ +I+G+CK + A L +M ++P+V YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
L L + +++A++LF+EMQR D ++ IDG K G
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG--------------- 578
Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
DI+S L+ G+ ++G L D+ TY+ +I+ G +D+A
Sbjct: 579 ----DIKSAESLLVGMSRAG----------------LSPDLFTYSKLINRFLKLGYLDEA 618
Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
F M G PD ++++ CI ET K+ EL+ ++ +++
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKD 664
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 164/313 (52%), Gaps = 2/313 (0%)
Query: 94 DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
+V +N +++G C + +A L EM + P+V +++ ++ C+ ++E+A +L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
M G + + L+D FC G+++ A M+ MG + ++ Y+ LI G+C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
E++ +L+ E+L +G P +TYNTL G ++ Q++ A ++F+ M GV + + Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
IDGLC G EAL+L + E + +Y+ +I+ LCK G + A E+ + +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDM--EAKGVAPDCVAFNTLMLGCIRNNET 391
D +TYNI++ LCA G +D+A L M ++ PD +++N L+ G + N
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 392 SKVVELLHRMDER 404
+ +++ + E+
Sbjct: 441 HQALDIYDLLVEK 453
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 35/338 (10%)
Query: 99 NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
N+++ + + A + +M++ N V+ S +++ + K A +L LM++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
G N + +N L+ G C +A L M +VFSY+ +I G+C+ KE+E
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 219 ALSLYSEMLSKGIKPTVVT-----------------------------------YNTLFI 243
AL L +EM G ++VT Y +L
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
G + +++R LFDE+ G + Y T I G CK G + EA E+F +
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
++ +Y+ LIDGLC G+ K A +L + + + VTYNI+I+ LC DG + A ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
M+ + PD + +N L+ G + + +LL+ M
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 4/318 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A + +K P+ ITY+ L+ GLC G A L M+ + PD +
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVI 425
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y +I GLCKE + +A ++ + +K D VT N ++ A D N+A L+ ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D + N T++ ++D CK G + A LL M ++P+ F YN L+ C G +
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
++A LF M+ +V S++I+I+G K +I+ A SL M G+ P + TY+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
++ ++ A FD+M G D + + G + EL + L
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Query: 302 ELDIRSYSCLIDGLCKSG 319
LD ++D +C S
Sbjct: 666 VLDKELTCTVMDYMCNSS 683
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 7/308 (2%)
Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQP-NVVTFS--VIMDELCKNGKMEEASQLLELMIQ 158
+R C DSN + + + Q V + + F+ +M +L ++ E A M++
Sbjct: 43 LRSLC--EDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLE 100
Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
N + L++ + + A + M G NV++++IL+ G C+N E
Sbjct: 101 TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK 160
Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
A+SL EM + P V +YNT+ G E ++E+A +L +EM+ G + + ID
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLI 337
CK G + EA+ + ++ + E D+ Y+ LI G C G L LF L RG
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
+TYN +I C G++ +A ++F M +GV P+ + L+ G +T + ++L
Sbjct: 281 C-AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 398 LHRMDERN 405
L+ M E++
Sbjct: 340 LNLMIEKD 347
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A +L + G P++ TYS LIN + G+ A++ F++M++ E PDA I
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE------PDAHI 636
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-AKRLF 118
+++ +G DK EL+ ++ DK+I D +V+ C ++ + + AKRL
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 197/386 (51%), Gaps = 13/386 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
A +F + C P+ TY TL++GLC+ A+ L +EM + C P V
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG------CSPSPV 258
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
IY +IDGLCK+G + + +L+ M K P+ VTYN++I G C ++A L M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ PN VT+ +++ L K + +A +LL M + G N +Y+ L+ G G+
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
A L+ M GCK N+ YS+L++G C+ + A + + M++ G P TY++L
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G F+ E A +++ EM + G + + + Y IDGLC G + EA+ ++ + +
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-----PRGVLIADVVTYNIMIHALCADGKM 356
+ D +YS +I GLC G + A +L+H + P+ DVVTYNI++ LC +
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ--PDVVTYNILLDGLCMQKDI 556
Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM 382
+A DL M +G PD + NT +
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFL 582
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 197/391 (50%), Gaps = 9/391 (2%)
Query: 17 PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
PN ++++ +I LC+ A+ +F M C PD Y T++DGLCKE +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK------CLPDGYTYCTLMDGLCKEERI 238
Query: 77 DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
D+A LL +M+ + +P V YN +I G C D +L M +G PN VT++ +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
+ LC GK+++A LLE M+ PN Y TL++G R A L SME G
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
N YS+LI+G K + E A+SL+ +M KG KP +V Y+ L GL + A +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
+ + M G + + Y + + G K G EA+++++ + C + YS LIDGLC
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM---EAKGVAP 373
GR+K A ++ + + D V Y+ +I LC G MD A L+ +M E P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
D V +N L+ G + S+ V+LL+ M +R
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 179/386 (46%), Gaps = 58/386 (15%)
Query: 14 GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
GC PN +TY+TLI+GLC G A++L E M++ C P+ V Y T+I+GL K+
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK------CIPNDVTYGTLINGLVKQ 340
Query: 74 GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
A LL M+++ + + Y+ +I G + EA L+ +M ++G +PN+V +
Sbjct: 341 RRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVY 400
Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
SV++D LC+ GK EA ++L MI G PNA+ Y++LM GF TG A +++ M+
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT------------------- 234
GC N F YS+LI+G C ++ A+ ++S+ML+ GIKP
Sbjct: 461 TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDA 520
Query: 235 -------------------VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
VVTYN L GL + RA L + M G D T
Sbjct: 521 ALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNT 580
Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
F++ L + + F EL +R L K R+ A + +
Sbjct: 581 FLNTLSEKSNSCDKGRSFLE------ELVVR--------LLKRQRVSGACTIVEVMLGKY 626
Query: 336 LIADVVTYNIMIHALCADGKMDKAHD 361
L T+ +++ +C K++ A D
Sbjct: 627 LAPKTSTWAMIVREICKPKKINAAID 652
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 142/249 (57%), Gaps = 9/249 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A L + ++ G N YS LI+GL + G A++L+ +M E G CKP+ V
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM----AEKG--CKPNIV 398
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+Y+ ++DGLC+EG ++AKE+L +M P+ TY+S+++GF EA +++ EM
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
G N +SV++D LC G+++EA + M+ IG++P+ Y++++ G C G +
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518
Query: 182 NRAKELFVSM---ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
+ A +L+ M E + +V +Y+IL++G C K+I A+ L + ML +G P V+T
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 239 NTLFIGLFE 247
NT L E
Sbjct: 579 NTFLNTLSE 587
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 166/346 (47%), Gaps = 23/346 (6%)
Query: 72 KEGFVDKAKELLLQMKDK-NINPDVVTYNSVI----------RG---FCYANDSNEAKRL 117
K DKA +L +M D+ V ++NSV+ RG + Y +SN
Sbjct: 124 KAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN----- 178
Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
M+ + PN ++F++++ LCK ++ A ++ M + P+ + Y TLMDG C
Sbjct: 179 ----MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234
Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
R++ A L M+S GC + Y++LI+G CK ++ L M KG P VT
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
YNTL GL ++++A L + M + Y T I+GL K +A+ L ++
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
L+ YS LI GL K G+ + A L+ + ++V Y++++ LC +GK +
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
+A ++ M A G P+ +++LM G + + V++ MD+
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV---NRAKELF 188
T S +++ +G + +LL +I + + + + F G+ ++A +LF
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLS---RIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLF 135
Query: 189 VSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----IKPTVVTYNTLFI 243
M + CK +V S++ ++N L Y +++ I P +++N +
Sbjct: 136 HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195
Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
L ++ V+RA ++F M D + Y T +DGLCK I EA+ L ++ C
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
Y+ LIDGLCK G L +L ++ + + VTYN +IH LC GK+DKA L
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
M + P+ V + TL+ G ++ + V LL M+ER
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 158/363 (43%), Gaps = 33/363 (9%)
Query: 43 EEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI 102
E+M + G D+ + +++I+ G D ++LL +++ +N ++ V
Sbjct: 61 EKMFKSAPKMGSFKLGDSTL-SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVF 119
Query: 103 RGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
R + A+ ++A LF M+D+ + +V +F+ +++ + G + G+
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEG-----------LYHRGL 168
Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
+V N+ M+ M N S++++I CK + ++ A+
Sbjct: 169 EFYDYVVNSNMN--------------------MNISPNGLSFNLVIKALCKLRFVDRAIE 208
Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
++ M + P TY TL GL + +++ A L DEMQ G + Y IDGLC
Sbjct: 209 VFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLC 268
Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
K G + +L + + C + +Y+ LI GLC G+L A L + I + V
Sbjct: 269 KKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDV 328
Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
TY +I+ L + A L ME +G + ++ L+ G + + + + L +M
Sbjct: 329 TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
Query: 402 DER 404
E+
Sbjct: 389 AEK 391
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 24/169 (14%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA +++K+ G +P+ + YS++I GLC G AL L+ EM+ +PD V
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS---QPDVV 541
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE- 120
Y ++DGLC + + +A +LL M D+ +PDV+T N+ + ++S + R F+E
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE 601
Query: 121 --------------------MMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
M+ + + P T+++I+ E+CK K+ A
Sbjct: 602 LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 196/364 (53%), Gaps = 6/364 (1%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A + +L + C+P VITY+ LI G AL L +EM++ KPD
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFT 265
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y TII G+CKEG VD+A E++ ++ K PDV++YN ++R E ++L +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ PNVVT+S+++ LC++GK+EEA LL+LM + G+ P+A+ Y+ L+ FC GR++
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
A E +M S GC ++ +Y+ ++ CKN + + AL ++ ++ G P +YNT+F
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
L+ RA + EM +G+ D Y + I LC+ G + EA EL +R +
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
+ +Y+ ++ G CK+ R++ A + S+ + TY ++I + G +A +L
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Query: 363 FLDM 366
D+
Sbjct: 566 ANDL 569
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 206/401 (51%), Gaps = 7/401 (1%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+E+ L + G P+VI + LI G + A+ + E + +FG +PD
Sbjct: 106 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL----EKFG---QPDV 158
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
Y +I+G CK +D A +L +M+ K+ +PD VTYN +I C + A ++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
++ QP V+T++++++ G ++EA +L++ M+ G++P+ F YNT++ G C G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V+RA E+ ++E GC+ +V SY+IL+ + E L ++M S+ P VVTY+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L L ++E A L M+ G+ D ++Y I C+ G + A+E T+
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
C DI +Y+ ++ LCK+G+ A E+F L + +YN M AL + G +A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
+ L+M + G+ PD + +N+++ R + ELL M
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 180/352 (51%), Gaps = 7/352 (1%)
Query: 30 CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
CR+G+ I +L+L E M+ PD ++ T +I G + KA ++ ++ +K
Sbjct: 100 CRSGNYIESLHLLETMVRKG------YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152
Query: 90 NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
PDV YN++I GFC N ++A R+ M + P+ VT+++++ LC GK++ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
++L ++ +P Y L++ L G V+ A +L M S G K ++F+Y+ +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
CK ++ A + + KG +P V++YN L L + E KL +M +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
Y I LC++G I EA+ L + ++ D SY LI C+ GRL +A E
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
++ + D+V YN ++ LC +GK D+A ++F + G +P+ ++NT+
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 177/333 (53%), Gaps = 1/333 (0%)
Query: 71 CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
C+ G ++ LL M K NPDV+ +I+GF + +A R+ +E++++ QP+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158
Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
++ +++ CK ++++A+++L+ M P+ YN ++ C G+++ A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
+ S C+ V +Y+ILI ++ AL L EMLS+G+KP + TYNT+ G+ +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
V+RAF++ ++ G D +Y + L G E +L + KC+ ++ +YS
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
LI LC+ G+++ A L + L D +Y+ +I A C +G++D A + M + G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
PD V +NT++ +N + + +E+ ++ E
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 140/301 (46%), Gaps = 36/301 (11%)
Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
I C++G E+ LLE M++ G P+ + L+ GF + +A + +E G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF----------IGL 245
+ +VF+Y+ LING+CK I+ A + M SK P VTYN + + L
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 246 FEIHQ-------------------------VERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
++Q V+ A KL DEM G+ D + Y T I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
CK G + A E+ R L + CE D+ SY+ L+ L G+ + +L + +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
VTY+I+I LC DGK+++A +L M+ KG+ PD +++ L+ R +E L
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 401 M 401
M
Sbjct: 394 M 394
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 103/187 (55%), Gaps = 7/187 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A +F KL GC PN +Y+T+ + L +G I AL++ EM++ NG PD +
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS-NG-----IDPDEI 474
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y ++I LC+EG VD+A ELL+ M+ +P VVTYN V+ GFC A+ +A + M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G +PN T++V+++ + G EA +L +++I + + + L F L +
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA-ISEYSFKRLHRTFPLLNVL 593
Query: 182 NRAKELF 188
R+ + F
Sbjct: 594 QRSSQTF 600
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+ A + ++ + G +P+ ITY+++I+ LCR G A L +M + EF P
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEF----HPSV 508
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
V Y ++ G CK ++ A +L M P+ TY +I G +A EA L
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 208/403 (51%), Gaps = 6/403 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L ++ GC+P+ TY+ LI LC G A NLF+EMI CKP+
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG------CKPNVH 337
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YT +IDGLC++G +++A + +M I P V+TYN++I G+C A L M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ +PNV TF+ +M+ LC+ GK +A LL+ M+ G+ P+ YN L+DG C G +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
N A +L SM + + +++ +IN +CK + + A + ML KGI VT TL
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
G+ ++ + A + + + + + + +D L K + E L + + L
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ +Y+ L+DGL +SG + ++ + + + +V Y I+I+ LC G++++A
Sbjct: 578 VPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
L M+ GV+P+ V + ++ G + N + + +E + M ER
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 28/391 (7%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+ A L T ++ C+PNV T++ L+ GLCR G A++L + M++ NG PD
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD-NG-----LSPDI 441
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V Y +IDGLC+EG ++ A +LL M +I PD +T+ ++I FC ++ A
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ +G+ + VT + ++D +CK GK +A +LE ++++ + N ++D +
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
V + + +G +V +Y+ L++G ++ +I G+ + M G P V Y
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTI 621
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
+ GL + +VE A KL MQ GV+ + Y + G NG + ALE R +
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Query: 301 CELDIRSYSCLIDGLCKSGR----------LKIAW---------ELFHSLPR-GVLIADV 340
EL+ R YS L+ G S + IA EL + + G I+ +
Sbjct: 682 YELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGL 741
Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
+ ++ LC +G+ D+++DL ++ +GV
Sbjct: 742 CIF--LVTRLCKEGRTDESNDLVQNVLERGV 770
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 148/286 (51%), Gaps = 1/286 (0%)
Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
+ M G ++ + I++ LCKNG E A + +++IG ++ + +L+ GFC
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 178 TGRVNRAKELF-VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
+ A ++F V + + C N SYSILI+G C+ +E A L +M KG +P+
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
TY L L + +++AF LFDEM G + Y IDGLC++G I EA + R +
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
+ + +Y+ LI+G CK GR+ A+EL + + +V T+N ++ LC GK
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
KA L M G++PD V++N L+ G R + +LL M+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 147/361 (40%), Gaps = 85/361 (23%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFE------------------- 43
A+A + G + +T +TLI+G+C+ G T AL + E
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 44 ------------EMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
M+ + G+V P V YTT++DGL + G + + +L MK
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLV--PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 92 NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
P+V Y +I G C EA++L M D GV PN VT++V++ NGK++ A +
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGR-VNRAKELFVS------------------ME 192
+ M++ G N +Y++L+ GF L+ + ++ ++E VS +E
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732
Query: 193 SMG--------------CK-----------HNVF--------SYSILINGYCKNKEIEGA 219
+G CK NV + I++ YC K+
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKC 792
Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
+ L + +L G P+ ++ + GL + ERA +L E+ + T+++
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVEC 852
Query: 280 L 280
L
Sbjct: 853 L 853
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 40/210 (19%)
Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
G + Y++L + L ++ A+ + M+ G YRT ++ LCKNGY EA
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGY-TEA 213
Query: 290 LELFRTLRILK--------------------------------------CELDIRSYSCL 311
E+F + +ILK C + SYS L
Sbjct: 214 AEMFMS-KILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272
Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
I GLC+ GRL+ A+ L + TY ++I ALC G +DKA +LF +M +G
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
P+ + L+ G R+ + + + +M
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 217/405 (53%), Gaps = 8/405 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A + K++ G P+V T+I G + AL LF+E E G+ +
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF----ETGLA---NVF 444
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
+ TI+ LCK+G D+A ELL +M+ + I P+VV+YN+V+ G C + + A+ +F +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++G++PN T+S+++D +N + A +++ M + N VY T+++G C G+
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
++A+EL +M E + SY+ +I+G+ K E++ A++ Y EM GI P V+TY +
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L GL + +++++A ++ DEM+ GV D AY IDG CK + A LF L
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
Y+ LI G G + A +L+ + + L D+ TY +I L DG + A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
+L+ +M+A G+ PD + + ++ G + + KVV++ M + N
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Score = 201 bits (512), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 214/397 (53%), Gaps = 7/397 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA L +K+++ G PNV++Y+ ++ G CR + +A +F ++ E G+ KP+
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL----EKGL--KPNNY 514
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y+ +IDG + A E++ M NI + V Y ++I G C +++A+ L M
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+++ + + ++++ I+D K G+M+ A E M G+ PN Y +LM+G C R
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+++A E+ M++ G K ++ +Y LI+G+CK +E A +L+SE+L +G+ P+ YN+
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
L G + + A L+ +M + G+ D Y T IDGL K+G ++ A EL+ ++ +
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
D Y+ +++GL K G+ ++F + + + +V+ YN +I +G +D+A
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
L +M KG+ PD F+ L+ G + N + + L
Sbjct: 815 RLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 209/428 (48%), Gaps = 43/428 (10%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA + ++ G EP+ + YS + C+T +A +L EM +C P
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK-----LCVPSQE 305
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
YT++I K+G +D A L +M I+ +VV S+I G C ND A LF +M
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP------------------ 163
+G PN VTFSV+++ KNG+ME+A + + M +G+ P
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 164 ----------------NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
N FV NT++ C G+ + A EL MES G NV SY+ ++
Sbjct: 426 EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
G+C+ K ++ A ++S +L KG+KP TY+ L G F H + A ++ + M +
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR--SYSCLIDGLCKSGRLKIAW 325
+ Y+T I+GLCK G +A EL + I + L + SY+ +IDG K G + A
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANM-IEEKRLCVSCMSYNSIIDGFFKEGEMDSAV 604
Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG- 384
+ + + +V+TY +++ LC + +MD+A ++ +M+ KGV D A+ L+ G
Sbjct: 605 AAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Query: 385 CIRNNETS 392
C R+N S
Sbjct: 665 CKRSNMES 672
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 192/414 (46%), Gaps = 24/414 (5%)
Query: 3 AAALFTKL----KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
A+ L +KL K+FG E N ++ L+N + T A+++ +M+ E V+ P
Sbjct: 143 ASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQML----ELDVI--P 196
Query: 59 DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
+ L + + +AKEL +M ++ D VT ++R EA +
Sbjct: 197 FFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVL 256
Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV-RPNAFVYNTLMDGFCL 177
+++G +P+ + +S+ + CK + A+ LL M + + P+ Y +++
Sbjct: 257 SRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVK 316
Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
G ++ A L M S G NV + + LI G+CKN ++ AL L+ +M +G P VT
Sbjct: 317 QGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVT 376
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT-- 295
++ L + ++E+A + + +M+ G+ + T I G K EAL+LF
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF 436
Query: 296 ----LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
+ C + ++ LCK G+ A EL + + +VV+YN ++ C
Sbjct: 437 ETGLANVFVC-------NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
MD A +F ++ KG+ P+ ++ L+ GC RN++ +E+++ M N
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 211 bits (538), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 206/367 (56%), Gaps = 11/367 (2%)
Query: 16 EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK--- 72
+PNV T++ +IN LC+TG A ++ E+M +G C P+ V Y T+IDG CK
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDM----KVYG--CSPNVVSYNTLIDGYCKLGG 273
Query: 73 EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
G + KA +L +M + +++P++ T+N +I GF ++ + ++F EM+DQ V+PNV++
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
++ +++ LC GK+ EA + + M+ GV+PN YN L++GFC + A ++F S++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
G Y++LI+ YCK +I+ +L EM +GI P V TYN L GL +E
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
A KLFD++ G+ D + ++G C+ G +A L + + + + +Y+ ++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Query: 313 DGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
G CK G LK A + + + L +V +YN+++ GK++ A+ L +M KG+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Query: 372 APDCVAF 378
P+ + +
Sbjct: 573 VPNRITY 579
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 187/357 (52%), Gaps = 11/357 (3%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCR---TGHTIVALNLFEEMINGNGEFGVVCKP 58
+A + +K +GC PNV++Y+TLI+G C+ G A + +EM+ + P
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND------VSP 294
Query: 59 DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
+ + +IDG K+ + + ++ +M D+++ P+V++YNS+I G C +EA +
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMR 354
Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
+M+ GVQPN++T++ +++ CKN ++EA + + G P +YN L+D +C
Sbjct: 355 DKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL 414
Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
G+++ L ME G +V +Y+ LI G C+N IE A L+ ++ SKG+ P +VT+
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTF 473
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-R 297
+ L G + +A L EM + G+ Y + G CK G + A + + +
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
+ +++ SY+ L+ G + G+L+ A L + + L+ + +TY I+ + G
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 177/351 (50%), Gaps = 11/351 (3%)
Query: 56 CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
CKP ++ L KE + + +M + I P+V T+N VI C N+A+
Sbjct: 191 CKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCK---NGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
+ +M G PNVV+++ ++D CK NGKM +A +L+ M++ V PN +N L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
DGF + + ++F M K NV SY+ LING C +I A+S+ +M+S G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
P ++TYN L G + ++ A +F ++ G T Y ID CK G I + L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
+ D+ +Y+CLI GLC++G ++ A +LF L L D+VT++I++ C
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482
Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
G+ KA L +M G+ P + +N +M G + + +M++
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 164/322 (50%), Gaps = 14/322 (4%)
Query: 94 DVVTYNSVIRG---FCYANDSN-----EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
D V NS+I YAN+S EA F G + + ++ +M L K +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEA---FKRSGYYGYKLSALSCKPLMIALLKENR 203
Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
+ + + MI+ ++PN F +N +++ C TG++N+A+++ M+ GC NV SY+
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 206 LINGYCK---NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
LI+GYCK N ++ A ++ EM+ + P + T+N L G ++ + + K+F EM
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
V + +Y + I+GLC G I EA+ + + + ++ +Y+ LI+G CK+ LK
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
A ++F S+ + YN++I A C GK+D L +ME +G+ PD +N L+
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 383 LGCIRNNETSKVVELLHRMDER 404
G RN +L ++ +
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSK 465
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 147/274 (53%), Gaps = 8/274 (2%)
Query: 16 EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
+PNVI+Y++LINGLC G A+++ ++M++ GV +P+ + Y +I+G CK
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCKNDM 381
Query: 76 VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
+ +A ++ +K + P YN +I +C ++ L EM +G+ P+V T++
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
++ LC+NG +E A +L + + G+ P+ ++ LM+G+C G +A L M MG
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPTVVTYNTLFIGLFEIHQVERA 254
K +Y+I++ GYCK ++ A ++ ++M + ++ V +YN L G + ++E A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
L +EM G+ + Y + + G++ +
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 220/464 (47%), Gaps = 68/464 (14%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A LF ++ GC+PN T+ L+ G C+ G T L E++N FGV+ P+ VI
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL----ELLNAMESFGVL--PNKVI 219
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS---------------------- 100
Y TI+ C+EG D +++++ +M+++ + PD+VT+NS
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 101 -----------------VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
+++GFC +AK LF + + ++ ++++ + L ++
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
GK EA +L+ M G+ P+ + YN LMDG C G ++ AK + M+ G + +Y
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
L++GYC +++ A SL EM+ P T N L L+++ ++ A +L +M
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL-----------------------K 300
G DT +DGLC +G + +A+E+ + +R+
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
C D+ +YS L++GLCK+GR A LF + L D V YNI IH C GK+ A
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+ DME KG +N+L+LG N+ ++ L+ M E+
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 212/461 (45%), Gaps = 68/461 (14%)
Query: 6 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
L+ + G P T++ LI LC + A LF+EM CKP+ +
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG------CKPNEFTFGI 187
Query: 66 IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
++ G CK G DK ELL M+ + P+ V YN+++ FC +++++++ +M ++G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQL---LELMIQIGV-RPNAFVYNTLMDGFCLTGRV 181
+ P++VTF+ + LCK GK+ +AS++ +EL +G+ RPN+ YN ++ GFC G +
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307
Query: 182 NRAKELFVS-----------------------------------MESMGCKHNVFSYSIL 206
AK LF S M G +++SY+IL
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
++G CK + A ++ M G+ P VTY L G + +V+ A L EM R+
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
+ + + L K G I EA EL R + LD + + ++DGLC SG L A E
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 327 LFH-----------------------SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
+ SL + D++TY+ +++ LC G+ +A +LF
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+M + + PD VA+N + + + S +L M+++
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 209/427 (48%), Gaps = 25/427 (5%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
++ + K++ G P+++T+++ I+ LC+ G + A +F +M E+ + +P+++
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM--ELDEYLGLPRPNSI 292
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y ++ G CK G ++ AK L +++ + + +YN ++G EA+ + +M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D+G+ P++ +++++MD LCK G + +A ++ LM + GV P+A Y L+ G+C G+V
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+ AK L M C N ++ +IL++ K I A L +M KG VT N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA-----------------------DTWAYRTFID 278
GL ++++A ++ M+ HG AA D Y T ++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
GLCK G EA LF + K + D +Y+ I CK G++ A+ + + +
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
+ TYN +I L ++ + H L +M+ KG++P+ +NT + + LL
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Query: 399 HRMDERN 405
M ++N
Sbjct: 653 DEMMQKN 659
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 178/352 (50%), Gaps = 4/352 (1%)
Query: 57 KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
KP +Y +++ KE V+ L M I P T+N +IR C ++ + A+
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
LF EM ++G +PN TF +++ CK G ++ +LL M GV PN +YNT++ FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGI---K 232
GR + ++++ M G ++ +++ I+ CK ++ A ++S+M L + + +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
P +TYN + G ++ +E A LF+ ++ + A +Y ++ GL ++G +EA +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
+ + I SY+ L+DGLCK G L A + + R + D VTY ++H C+
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
GK+D A L +M P+ N L+ + S+ ELL +M+E+
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 204/432 (47%), Gaps = 40/432 (9%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFGVV 55
+EA + ++ G P++ +Y+ L++GLC+ G TIV L + NG V
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL------MKRNG----V 392
Query: 56 CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
C PDAV Y ++ G C G VD AK LL +M N P+ T N ++ +EA+
Sbjct: 393 C-PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM------------------- 156
L +M ++G + VT ++I+D LC +G++++A ++++ M
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 157 ----IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
I+ P+ Y+TL++G C GR AK LF M + + +Y+I I+ +CK
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK 571
Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
+I A + +M KG ++ TYN+L +GL +Q+ L DEM+ G++ +
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICT 631
Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
Y T I LC+ + +A L + ++ S+ LI+ CK +A E+F +
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET-A 690
Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
+ Y++M + L A G++ KA +L + +G + L+ + +E
Sbjct: 691 VSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELE 750
Query: 393 KVVELLHRMDER 404
+LH+M +R
Sbjct: 751 VASGILHKMIDR 762
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 193/407 (47%), Gaps = 32/407 (7%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
+A + +K G P+ +TY L++G C G A +L +EM+ N C P+A
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN------CLPNAY 432
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
++ L K G + +A+ELL +M +K D VT N ++ G C + + ++A +
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Query: 118 --------------FIEMMDQGV-----QPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
+I ++D + P+++T+S +++ LCK G+ EA L M+
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
++P++ YN + FC G+++ A + ME GC ++ +Y+ LI G +I
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
L EM KGI P + TYNT L E +VE A L DEM + +A + ++++ I+
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672
Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLI 337
CK A E+F T + C YS + + L +G+L A EL + L RG +
Sbjct: 673 AFCKVPDFDMAQEVFET-AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
+ Y ++ +LC +++ A + M +G D A ++ G
Sbjct: 732 GTFL-YKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDG 777
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 113/282 (40%), Gaps = 75/282 (26%)
Query: 15 CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
C P++ITYSTL+NGLC+ G A NLF EM+ G +PD+V Y I CK+G
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM------GEKLQPDSVAYNIFIHHFCKQG 573
Query: 75 FVDKA-----------------------------------KELLLQMKDKNINPDVVTYN 99
+ A L+ +MK+K I+P++ TYN
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633
Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK----------------- 142
+ I+ C +A L EMM + + PNV +F +++ CK
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI 693
Query: 143 -----------------NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
G++ +A++LLE ++ G F+Y L++ C + A
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
+ M G + + +I+G K + A S +M+
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 211/431 (48%), Gaps = 50/431 (11%)
Query: 6 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
++ +K G EPNV TY+ L+ LC+ A L EM N C PDAV YTT
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG------CCPDAVSYTT 221
Query: 66 IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
+I +C+ G V + +EL + P V YN++I G C +D A L EM+++G
Sbjct: 222 VISSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ--------------------------- 158
+ PNV+++S +++ LC +G++E A L M++
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 159 ---------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
G++PN YNTL+ GFC G + +A +F ME +GC N+ +Y LING
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
+ K ++GA+ ++++ML+ G P VV Y + L + + A L + M + A
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
+ FI GLC G + A ++FR + + +C +I +Y+ L+DGL K+ R++ A+ L
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 329 HSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
+ RGV + TYN ++H C G A L M G +PD + N ++L +
Sbjct: 517 REIFMRGVEWSS-STYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 388 NNETSKVVELL 398
+ + ++L
Sbjct: 576 QGKAERAAQML 586
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 192/398 (48%), Gaps = 14/398 (3%)
Query: 9 KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
KL+ F C ++ + ++I+ + G A+ +F + EFG C P IY ++D
Sbjct: 103 KLQGFHCSEDL--FISVISVYRQVGLAERAVEMFYRI----KEFG--CDPSVKIYNHVLD 154
Query: 69 GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
L E + + MK P+V TYN +++ C N + AK+L +EM ++G P
Sbjct: 155 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 214
Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
+ V+++ ++ +C+ G ++E +L E P VYN L++G C A EL
Sbjct: 215 DAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELM 269
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
M G NV SYS LIN C + +IE A S ++ML +G P + T ++L G F
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329
Query: 249 HQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
A L+++M R G+ + AY T + G C +G IV+A+ +F + + C +IR+
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
Y LI+G K G L A +++ + +VV Y M+ ALC K +A L M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
+ AP FN + G ++ +M++++
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 144/282 (51%), Gaps = 11/282 (3%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
++A ++F+ ++ GC PN+ TY +LING + G A+ ++ +M+ C P+
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG------CCPNV 422
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
V+YT +++ LC+ +A+ L+ M +N P V T+N+ I+G C A + A+++F +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 121 MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
M Q PN+VT++ ++D L K ++EEA L + GV ++ YNTL+ G C G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPTVV 236
A +L M G + + +++I YCK + E A + +++S G +P V+
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVI 601
Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
+Y + GL + E L + M G+ + I+
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 5/271 (1%)
Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
+TF V++ +L +G+++ LL+ M G + ++ +++ + G RA E+F
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
++ GC +V Y+ +++ I+ +Y +M G +P V TYN L L + ++
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
V+ A KL EM G D +Y T I +C+ G + E EL E + Y+
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNA 251
Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
LI+GLCK K A+EL + + +V++Y+ +I+ LC G+++ A M +G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
P+ ++L+ GC T ++L ++M
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 43/224 (19%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA +L + C P+V T++ I GLC G A +F +M E C P+ V
Sbjct: 440 EAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM-----EQQHRCPPNIV 494
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
Y ++DGL K +++A L ++ + + TYN+++ G C A A +L +M
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL-------------------------- 155
M G P+ +T ++I+ CK GK E A+Q+L+L
Sbjct: 555 MVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSN 614
Query: 156 -----------MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
MI G+ P+ ++ L++ F L V RA + F
Sbjct: 615 CREDGVILLERMISAGIVPSIATWSVLINCFILDDIV-RAHDQF 657
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 204/392 (52%), Gaps = 6/392 (1%)
Query: 6 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
L ++ + G +PNV Y+ I LCR A +FE M + GV+ P+ Y+
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM----KKHGVL--PNLYTYSA 274
Query: 66 IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
+IDG CK G V +A L ++ + P+VV + +++ GFC A + A+ LF+ M+ G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
V PN+ ++ ++ CK+G M EA LL M + + P+ F Y L++G C+ +V A
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
LF M++ + +Y+ LI+GYCK +E AL L SEM + G++P ++T++TL G
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
+ ++ A L+ EM G+ D Y ID K + EAL L+ + +
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND 514
Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
+++CL+DG K GRL +A + + + + V + +I LC +G + +A F D
Sbjct: 515 HTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSD 574
Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
M + G+ PD ++ +++ G ++ + + L
Sbjct: 575 MRSCGITPDICSYVSMLKGHLQEKRITDTMML 606
Score = 197 bits (502), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 198/373 (53%), Gaps = 6/373 (1%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
EA +F +K G PN+ TYS +I+G C+TG+ A L++E++ P+ V
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE------LLPNVV 305
Query: 62 IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
++ T++DG CK + A+ L + M ++P++ YN +I G C + + EA L EM
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ P+V T++++++ LC ++ EA++L + M + P++ YN+L+ G+C +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
+A +L M + G + N+ ++S LI+GYC ++I+ A+ LY EM KGI P VVTY L
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
F+ ++ A +L+ +M G+ + + +DG K G + A++ ++ +
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
+ ++CLI+GLC++G + A F + + D+ +Y M+ + ++
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605
Query: 362 LFLDMEAKGVAPD 374
L DM G+ P+
Sbjct: 606 LQCDMIKTGILPN 618
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 193/394 (48%), Gaps = 6/394 (1%)
Query: 11 KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
+ C P+ +++NGL R ++ MI+ G+V PD IY +
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYFVLFQCC 209
Query: 71 CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
K+G K ++LL +M I P+V Y I C N EA+++F M GV PN+
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269
Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
T+S ++D CK G + +A L + ++ + PN V+ TL+DGFC + A+ LFV
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
M G N++ Y+ LI+G+CK+ + A+ L SEM S + P V TY L GL Q
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
V A +LF +M+ + + Y + I G CK + +AL+L + E +I ++S
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
LIDG C +K A L+ + ++ DVVTY +I A + M +A L+ DM G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+ P+ F L+ G + S ++ +++
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 151/298 (50%), Gaps = 6/298 (2%)
Query: 1 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
+EA L +++++ P+V TY+ LINGLC A LF++M N P +
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER------IFPSS 409
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
Y ++I G CKE +++A +L +M + P+++T++++I G+C D A L+ E
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M +G+ P+VVT++ ++D K M+EA +L M++ G+ PN + L+DGF GR
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
++ A + + N ++ LI G C+N I A +S+M S GI P + +Y +
Sbjct: 530 LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS 589
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
+ G + ++ L +M + G+ + + NGY+ A L + R+
Sbjct: 590 MLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRL 647
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 134/300 (44%), Gaps = 39/300 (13%)
Query: 107 YANDSNEAKRLFIEMMD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
++ SN + RLF + D Q + ++ FS+++ E + G EEA
Sbjct: 108 HSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEA---------------- 151
Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
L+VS E M C + + ++NG + + + Y
Sbjct: 152 ---------------------LWVSRE-MKCSPDSKACLSILNGLVRRRRFDSVWVDYQL 189
Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
M+S+G+ P V Y LF F+ + KL DEM G+ + + Y +I LC++
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
+ EA ++F ++ ++ +YS +IDG CK+G ++ A+ L+ + L+ +VV +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
++ C ++ A LF+ M GV P+ +N L+ G ++ + V LL M+ N
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 208 bits (530), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 208/413 (50%), Gaps = 24/413 (5%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------IN 47
A LF + + GC PN++TYS LI+G C+ G A +FE M +
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 48 GNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
N E +P+ V Y ++DG CK V++A++LL M + P+ + Y+++I G C
Sbjct: 632 DNSE-----RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
+EA+ + EM + G + T+S ++D K + + AS++L M++ PN +
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
Y ++DG C G+ + A +L ME GC+ NV +Y+ +I+G+ +IE L L M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
SKG+ P VTY L + ++ A L +EM++ T YR I+G N +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFI 864
Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP--RGVLIADVVTYNI 345
E+L L + + Y LID L K+ RL++A L + L+ TYN
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924
Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
+I +LC K++ A LF +M KGV P+ +F +L+ G RN++ S+ + LL
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 199/420 (47%), Gaps = 20/420 (4%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA--LNLFEEMINGNGEFGVVCKPDA 60
A L K+ G P + Y+ LI +C ++ L+L E+ + GVV +
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL--NK 448
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
+ ++ LC G +KA ++ +M + PD TY+ V+ C A+ A LF E
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M G+ +V T+++++D CK G +E+A + M ++G PN Y L+ + +
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGI-------- 231
V+ A ELF +M S GC N+ +YS LI+G+CK ++E A ++ M SK +
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Query: 232 -------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
+P VVTY L G + H+VE A KL D M G + Y IDGLCK G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
+ EA E+ + + +YS LID K R +A ++ + +VV Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
MI LC GK D+A+ L ME KG P+ V + ++ G + +ELL RM +
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 198/417 (47%), Gaps = 22/417 (5%)
Query: 3 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
A ++++ A G N I S+ LC G A ++ EMI G G PD
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI-----PDTST 485
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
Y+ +++ LC ++ A L +MK + DV TY ++ FC A +A++ F EM
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ G PNVVT++ ++ K K+ A++L E M+ G PN Y+ L+DG C G+V
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 183 RAKELFVSM----------------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
+A ++F M + + NV +Y L++G+CK+ +E A L M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
+G +P + Y+ L GL ++ +++ A ++ EM HG A + Y + ID K
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
A ++ + C ++ Y+ +IDGLCK G+ A++L + +VVTY M
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
I GK++ +L M +KGVAP+ V + L+ C +N LL M +
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 158 bits (400), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 15/353 (4%)
Query: 28 GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
LC+ G AL L E E V PD V YT +I GLC+ ++A + L +M+
Sbjct: 279 SLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCEASLFEEAMDFLNRMR 329
Query: 88 DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
+ P+VVTY++++ G KR+ MM +G P+ F+ ++ C +G
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389
Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSMESMGCKHNVF 201
A +LL+ M++ G P VYN L+ C ++ A++ + M + G N
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
+ S C + E A S+ EM+ +G P TY+ + L ++E AF LF+EM
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
+R G+ AD + Y +D CK G I +A + F +R + C ++ +Y+ LI K+ ++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
A ELF ++ + ++VTY+ +I C G+++KA +F M PD
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 180/399 (45%), Gaps = 15/399 (3%)
Query: 9 KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
+LK F P+ TY+ LI + A + EM N + D
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN------LRMDGFTLRCFAY 278
Query: 69 GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
LCK G K +E L ++ +N PD V Y +I G C A+ EA M P
Sbjct: 279 SLCKVG---KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
NVVT+S ++ ++ ++L +M+ G P+ ++N+L+ +C +G + A +L
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKE------IEGALSLYSEMLSKGIKPTVVTYNTLF 242
M G Y+ILI C +K+ ++ A YSEML+ G+ + ++
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
L + E+AF + EM G DT Y ++ LC + A LF ++
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
D+ +Y+ ++D CK+G ++ A + F+ + +VVTY +IHA K+ A++L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
F M ++G P+ V ++ L+ G + + K ++ RM
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 157/342 (45%), Gaps = 51/342 (14%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
EA L + GCEPN I Y LI+GLC+ G A + EM
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 49 NGEFGV----------------VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
+ F V C P+ VIYT +IDGLCK G D+A +L+ M++K
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 93 PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
P+VVTY ++I GF L M +GV PN VT+ V++D CKNG ++ A L
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS---------Y 203
LE M Q + Y +++GF KE +ES+G + Y
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGF--------NKEF---IESLGLLDEIGQDDTAPFLSVY 885
Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
+LI+ K + +E AL L E+ S + TYN+L L ++VE AF+LF EM
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945
Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
+ GV + ++ + I GL +N I EAL L + + C L
Sbjct: 946 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVCPL 987
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 171/433 (39%), Gaps = 52/433 (12%)
Query: 11 KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-FGVVCKPDAVIYTTIIDG 69
+ G + Y+ L++ + R V +++ + + E FG ++
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGE-------FLNVLVRK 209
Query: 70 LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
C+ G A E L ++KD P TYN +I+ F A+ + A + EM ++ +
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269
Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
T LCK GK EA L+E P+ Y L+ G C A +
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 190 SMESMGCKHNVFSYSILING-----------------------------------YCKNK 214
M + C NV +YS L+ G YC +
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGL------FEIHQVERAFKLFDEMQRHGVAA 268
+ A L +M+ G P V YN L + ++ A K + EM GV
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
+ +F LC G +A + R + D +YS +++ LC + ++++A+ LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
+ RG L+ADV TY IM+ + C G +++A F +M G P+ V + L+ ++
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 389 NETSKVVELLHRM 401
+ S EL M
Sbjct: 567 KKVSYANELFETM 579
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 211/442 (47%), Gaps = 46/442 (10%)
Query: 2 EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-HTIVALNLFEEMINGNGEFGVVCKPDA 60
+A F ++K F C P+V TY+ ++ + R ++A ++ EM+ N C P+
Sbjct: 145 KAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCN------CSPNL 198
Query: 61 VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
+ ++DGL K+G A+++ M + I+P+ VTY +I G C +++A++LF E
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYE 258
Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M G P+ V + ++D CK G+M EA +LL L + G Y++L+DG R
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
+A EL+ +M K ++ Y+ILI G K +IE AL L S M SKGI P YN
Sbjct: 319 YTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
+ L +E L EM D + I +C+NG + EA E+F +
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG-------------------------V 335
C + +++ LIDGLCKSG LK A L H + G +
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSI 498
Query: 336 LIA--------------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
L A D+V+YN++I+ C G +D A L ++ KG++PD V +NTL
Sbjct: 499 LKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 382 MLGCIRNNETSKVVELLHRMDE 403
+ G R + +L + D+
Sbjct: 559 INGLHRVGREEEAFKLFYAKDD 580
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 207/461 (44%), Gaps = 94/461 (20%)
Query: 22 YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
YS+LI+GL R A L+ M+ N KPD ++YT +I GL K G ++ A +
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKN------IKPDIILYTILIQGLSKAGKIEDALK 359
Query: 82 LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
LL M K I+PD YN+VI+ C E + L +EM + P+ T ++++ +C
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419
Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME--------- 192
+NG + EA ++ + + G P+ +N L+DG C +G + A+ L ME
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479
Query: 193 ------------------------------SMGCKHNVFSYSILINGYCKNKEIEGALSL 222
G ++ SY++LING+C+ +I+GAL L
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF---DEMQRHGVAADTWAYRTFIDG 279
+ + KG+ P VTYNTL GL + + E AFKLF D+ RH A YR+ +
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDF-RHSPA----VYRSLMTW 594
Query: 280 LCKNGYIVEALELF----------------------------RTLRIL------KCELDI 305
C+ ++ A L+ R LR L K EL +
Sbjct: 595 SCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTL 654
Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF-- 363
Y+ + GLC+SGR A +F L ++ + +IH LC ++D A ++F
Sbjct: 655 GPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLY 714
Query: 364 -LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV-ELLHRMD 402
LD K + C N L+ + + E ++V +L +RM+
Sbjct: 715 TLDNNFKLMPRVC---NYLLSSLLESTEKMEIVSQLTNRME 752
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 175/380 (46%), Gaps = 44/380 (11%)
Query: 63 YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
+ +ID L ++ D + L ++K ++ D + +I + + +A F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL-----MIQIGVRPNAFVYNTLMDGFCL 177
+ +P+V T++VI+ + + EE +L M++ PN + + LMDG
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
GR + A+++F M G N +Y+ILI+G C+ + A L+ EM + G P V
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
+N L G ++ ++ AF+L ++ G Y + IDGL + +A EL+ +
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP--------------------RGVL- 336
+ DI Y+ LI GL K+G+++ A +L S+P RG+L
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 337 --------------IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
D T+ I+I ++C +G + +A ++F ++E G +P FN L+
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Query: 383 LGCIRNNETSKVVELLHRMD 402
G ++ E + LLH+M+
Sbjct: 451 DGLCKSGELKEARLLLHKME 470
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 167/359 (46%), Gaps = 18/359 (5%)
Query: 47 NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC 106
+GN EF I +I L K+ ++ A E L+ KNI V+ + V R
Sbjct: 26 SGNAEFN--------ISGEVISILAKKKPIEPALEPLVPFLSKNIITSVIK-DEVNRQLG 76
Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
+ R FI + + +F +++D L ++ + Q LE + GV +++
Sbjct: 77 F--------RFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSY 128
Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI-EGALSLYSE 225
+ L+ + G +A E F M+ C+ +VF+Y++++ + + A ++Y+E
Sbjct: 129 CFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNE 188
Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
ML P + T+ L GL++ + A K+FD+M G++ + Y I GLC+ G
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
+A +LF ++ D +++ L+DG CK GR+ A+EL + + + Y+
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
+I L + +A +L+ +M K + PD + + L+ G + + ++LL M +
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF-IGLFEIH 249
++S G + + + +LI+ Y K E A+ + M +P V TYN + + + E
Sbjct: 118 LKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEV 177
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
AF +++EM + + + + + +DGL K G +A ++F + + +Y+
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237
Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
LI GLC+ G A +LF+ + D V +N ++ C G+M +A +L E
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297
Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
G +++L+ G R ++ EL M ++N
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,628,149
Number of Sequences: 539616
Number of extensions: 5925924
Number of successful extensions: 31181
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 18185
Number of HSP's gapped (non-prelim): 3636
length of query: 405
length of database: 191,569,459
effective HSP length: 120
effective length of query: 285
effective length of database: 126,815,539
effective search space: 36142428615
effective search space used: 36142428615
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)