BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035754
(335 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255553119|ref|XP_002517602.1| RNA binding protein, putative [Ricinus communis]
gi|223543234|gb|EEF44766.1| RNA binding protein, putative [Ricinus communis]
Length = 471
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 198/332 (59%), Gaps = 14/332 (4%)
Query: 11 NHDLFSL-AQDQEGSQYLQENLSSGDS-----RILDKLFWVVSGFTF--ELMSGQYGRFV 62
N D F + A Q+GS+YLQ+ L++ DS +ILDK+ V G LM Q+G V
Sbjct: 140 NQDSFIMFASTQQGSEYLQDLLATSDSYLTTSKILDKVTASVVGIPVINYLMVDQHGYHV 199
Query: 63 FGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSA 122
K I+SCN+ QL LI+ +IT + F+ GS +KKLIK V + Y +S
Sbjct: 200 CSKLIDSCNDIQLTLILERITKNTEQFVRICCAINGSKMIKKLIKKVKRSCLISYLTVSL 259
Query: 123 LKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN 182
K ++ L + + GS V++ C++ +N +Y+AA+ HCL LA GC++ N FID
Sbjct: 260 YKGFYQ-LAINQIGSYVVVFCMDCLDIQQNALLYEAAISHCLILATDAIGCVSANKFIDR 318
Query: 183 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
++GSRR+ +L LIS NA LS+ SGN+VVQ VL LE+P + I L+GHYV LS K
Sbjct: 319 IQGSRRQTLLELISDNAVFLSQDPSGNHVVQKVLGLENPIINAKIGAQLKGHYVRLSFQK 378
Query: 243 CGSFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTALAETMRQDRLSVH 300
GS VV+KCL Q A+ Y +++LL S Q+LQ+A D++GNYVIQ AL T +++ +++H
Sbjct: 379 WGSHVVEKCLVSQ-AMVYAVQDLLTCGSSQLLQIARDQFGNYVIQKALKVTKKKN-IALH 436
Query: 301 QRLVTKLQQHLAALRVMKYGSNVYKWTTASHP 332
+ L+ L+ +L ALR +G VY P
Sbjct: 437 RILLNSLEPNLNALR-NGFGKKVYSLIMDGIP 467
>gi|255544718|ref|XP_002513420.1| conserved hypothetical protein [Ricinus communis]
gi|223547328|gb|EEF48823.1| conserved hypothetical protein [Ricinus communis]
Length = 483
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 192/324 (59%), Gaps = 12/324 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFE------LMSGQYGRFVFGKFIESC 70
A Q+GS++LQ+ L+ +S KL V+ E LM QYG V K I+SC
Sbjct: 156 FASTQQGSKHLQDLLAYSNSDFASKLLETVTASVVEIPVINYLMVDQYGCHVCSKLIDSC 215
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+ QLALI+ +IT D+ F+ + GS +KKLIK V + Y +S L + F L
Sbjct: 216 NDKQLALILERITRNDEQFVQICCNINGSKMIKKLIKKVKRSCLICYMTVS-LYKGFCQL 274
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + GS V++ C++ ++ +Y+AA+ HCL LA GC+++NNFID ++GS R+
Sbjct: 275 AINQIGSYVVVFCMDCLDVKQSALLYEAAISHCLILATDATGCVSINNFIDRIQGSHRQT 334
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L LIS NA LS+ SGN+VVQ VL LE+P + I L+GHY LS K GS VV+K
Sbjct: 335 LLELISDNAVFLSQDPSGNHVVQKVLELENPIINAKIGAQLKGHYARLSFQKWGSHVVEK 394
Query: 251 CLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CL Q V Y++++LL S Q+ Q+A D++GNYVIQ AL T +++ +++H L+ L+
Sbjct: 395 CLVSQPIV-YVVQDLLTCGSSQLSQIARDQFGNYVIQKALKVTKKKN-ITLHLILLNSLK 452
Query: 309 QHLAALRVMKYGSNVYKWTTASHP 332
+L AL+ YG VY+ P
Sbjct: 453 PNLNALQ-NGYGKKVYRLIMDGIP 475
>gi|224117628|ref|XP_002317626.1| predicted protein [Populus trichocarpa]
gi|222860691|gb|EEE98238.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 181/320 (56%), Gaps = 12/320 (3%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFT-------FELMSGQYGRFVFGKFIESCNE 72
DQ GS+ +Q L + I +++ V + ELM Q+G VFG+ I++ N
Sbjct: 183 DQHGSRTIQGLLRLRNPEITREIYNKVLALSSRGIAVVLELMLDQHGWHVFGELIDALNY 242
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
QL LI +IT F+ ++D GS+S++K+I+++ PL+ VM+ L+ F +M
Sbjct: 243 QQLKLITYEITKNLDNFVSLTLDTHGSNSIRKVIRLLRR-SPLVTLVMNNLRAAFFTIMT 301
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ GS + +C N +Y+AA+E CL LA +G + L I+ ++G +R ++L
Sbjct: 302 NRIGSYAVSECFNQLSAEDNRLLYEAAIECCLDLAIDHEGSLALIRVINTIQGLQRYRLL 361
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
++S A LS+ GNYVVQ V+SL +P IC LRG+Y +SL K GS + +KCL
Sbjct: 362 DILSTYVAFLSQDPKGNYVVQKVISLNNPLFTQKICHHLRGYYGTISLQKGGSHIAEKCL 421
Query: 253 KYQNAVHYIIEELL-NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ ++IE+ L N++ +LQVA D++GNYVIQ AL T + ++Q+L+ +LQ HL
Sbjct: 422 DTE-WKSWVIEDFLSNTNTLLQVAKDEFGNYVIQKALKVTKKSGS-PLYQKLLLRLQPHL 479
Query: 312 AALRVMKYGSNVYKWTTASH 331
+ L+ YG NV+ T
Sbjct: 480 SILQ-SGYGRNVFNLITGGR 498
>gi|147798084|emb|CAN67257.1| hypothetical protein VITISV_039435 [Vitis vinifera]
Length = 507
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 164/264 (62%), Gaps = 3/264 (1%)
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMS 121
VF + E+C+ +QL+ I+ K+ + S D GS S+++LI+V+ P L+ V++
Sbjct: 239 VFIRLTEACDANQLSQILSKLILPPSTIIRVSHDPIGSKSIQRLIQVLRRSP-LVVPVVT 297
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
AL F LM + G+ VI +CL + +N+ +Y+AA+ C+ LA H +GCI LN+FI+
Sbjct: 298 ALAAGFYELMKDQQGAMVISRCLALLSSEQNEELYRAAILPCVALATHAKGCIALNSFIN 357
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
N+ G R +LH I+ N LS+ GN+VVQH+L L P IC L+G+YV LS+
Sbjct: 358 NVIGPYRDLLLHKITDNTVFLSQDPRGNFVVQHILELHHPVFTSKICHLLQGYYVRLSVQ 417
Query: 242 KCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
K GS +V+KCLK + + + ++EL S ++ Q+A+D++GNYVIQTAL T + + +++
Sbjct: 418 KSGSHIVEKCLK-SHWMSFAVKELTTSGRLPQLAHDQFGNYVIQTALRVT-KDANIQLYR 475
Query: 302 RLVTKLQQHLAALRVMKYGSNVYK 325
L+ L+ +L +L +G N+++
Sbjct: 476 SLLEALEPYLPSLASHLHGKNLFR 499
>gi|255564824|ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
gi|223537356|gb|EEF38985.1| RNA binding protein, putative [Ricinus communis]
Length = 771
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 170/312 (54%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ S G + ++K+F V ELM+ +G ++ K +E CNE
Sbjct: 427 VYLMAKDQHGCRFLQRKFSEGTPQDIEKIFLEVIDHIAELMTDPFGNYLVQKLLEVCNED 486
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + + S D G+ +V+K+I+ + P V+S+LK L+
Sbjct: 487 QRMQILCAITRKAGELVRISCDMHGTRAVQKVIETLK-TPQQFSMVVSSLKPGIVTLIKN 545
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V +CL+ ++F+++AA +C+ LA GC L + + +G +R+ ++
Sbjct: 546 MNGNHVAQRCLQYLTPEHSEFLFEAATTNCVELATDRHGCCVLQKCLSHSEGEQRRCLIS 605
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ GNYVVQ V L P+ I L G+Y DLS+ K S V++KCLK
Sbjct: 606 EITSNALILSQDPFGNYVVQFVFELRLPWATANILDQLEGNYGDLSMQKYSSNVIEKCLK 665
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
Y + H +II +L+++ + QV D YGNYVIQ AL Q + ++H LV ++ H+
Sbjct: 666 YASEEHRAHIIRQLISNTHLDQVMQDPYGNYVIQAAL----HQSKGALHAALVEAIRPHV 721
Query: 312 AALRVMKYGSNV 323
LR YG V
Sbjct: 722 PVLRTSPYGKKV 733
>gi|297793151|ref|XP_002864460.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
gi|297310295|gb|EFH40719.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
Length = 598
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 172/312 (55%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ LA+DQ G ++LQ + D ++ +F + + ELM +G ++ K +E CNE
Sbjct: 284 IYYLAKDQHGCRFLQRIFAEKDGNDIEMIFDEIIDYISELMIDPFGNYLVQKLLEVCNED 343
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + L + S D G+ +V+K+++ A + ++SALK L+
Sbjct: 344 QRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVET-AKREEEISIIISALKHGIVNLIKN 402
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ H F+++AA+ HC+ LA GC L + +G +++ ++
Sbjct: 403 VNGNHVVQRCLQYLLPHCGKFLFEAAITHCVDLATDRHGCCVLQKCLGYSEGEQKQHLVS 462
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ GNYV+Q+V L+ + I L G+Y +LS+ KC S VV+KCLK
Sbjct: 463 EIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLK 522
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ H II EL+N ++ QV D YGNYVIQ AL RQ + +VH LV ++ H+
Sbjct: 523 LADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAAL----RQSKGNVHALLVDAIKLHI 578
Query: 312 AALRVMKYGSNV 323
++LR YG V
Sbjct: 579 SSLRTNPYGKKV 590
>gi|224052863|ref|XP_002297618.1| predicted protein [Populus trichocarpa]
gi|222844876|gb|EEE82423.1| predicted protein [Populus trichocarpa]
Length = 620
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 170/322 (52%), Gaps = 20/322 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ S G + ++K+F + ELM+ +G ++ K +E CNE
Sbjct: 299 IYLMAKDQHGCRFLQRTFSEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNED 358
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + + S D G+ +V+K+I+ + P V+SALK L+
Sbjct: 359 QRMQILRTITRKAGELVRISCDMHGTRAVQKVIETL-KTPEQFSMVVSALKPCIVTLIKN 417
Query: 134 KPGSSVILQCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G+ V +CL+ P Y ++F+++A +C+ LA GC L + KG +R+
Sbjct: 418 MNGNHVAQRCLQYLMPEY---SEFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRC 474
Query: 191 ILHLISVNAASLSRHRSG-------NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
++ I+ NA LS+ G NYVVQ V L P+ I L G+Y DLS+ K
Sbjct: 475 LVSEITSNALILSQDPFGYCIFLFSNYVVQFVFELRLPWAATDILDQLEGNYGDLSVQKY 534
Query: 244 GSFVVQKCLKYQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
S VV+KCLKY V II EL+N+ ++ QV D +GNYVIQ AL +Q + ++H
Sbjct: 535 SSNVVEKCLKYAGEVRRTRIIRELINNSRLDQVMQDPFGNYVIQAAL----QQSKGALHA 590
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
LV ++ H+ L+ YG V
Sbjct: 591 ALVEAIRPHVPTLQTSPYGKKV 612
>gi|224056741|ref|XP_002299000.1| predicted protein [Populus trichocarpa]
gi|222846258|gb|EEE83805.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 175/320 (54%), Gaps = 12/320 (3%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFT-------FELMSGQYGRFVFGKFIESCNE 72
D++GS+ L LS D I ++ V + FELM Q+G VF + I+S N
Sbjct: 177 DKDGSRTLHGLLSLRDPEITCQICKKVLDLSSRGIPIFFELMLNQHGWQVFSELIDSLNH 236
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
QL LI IT +F+ + GS+ +KK+I+++ L+ V + L F +M
Sbjct: 237 QQLKLITYVITKDLSIFIALTFHTHGSNLIKKVIRILRR-SHLISFVTNNLCAAFLLIMT 295
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ GS V+ +CL N +Y+AA+ CL LA +G I L I+ ++G +R ++L
Sbjct: 296 NRIGSYVVSECLNHLRAEDNKALYEAAITWCLDLAIDHEGSIALIRVINTIQGLQRYRLL 355
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+++S NA LS+ GNYV+Q V+SL +P +C L GHY +SL K GS +V+KCL
Sbjct: 356 NILSRNAVFLSQDPEGNYVIQKVISLNNPLFTQNVCHLLIGHYETISLQKGGSHIVEKCL 415
Query: 253 KYQNAVHYIIEELL-NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ +IIE L N++ +L VA D +GNYVIQ AL T + ++ +L+++L+ HL
Sbjct: 416 DTE-WKGWIIENFLSNTNTLLHVAKDAFGNYVIQKALKVTKKSGS-PLYHKLLSRLKPHL 473
Query: 312 AALRVMKYGSNVYKWTTASH 331
+ L+ YG NV+ T
Sbjct: 474 SILQ-SGYGRNVFNLITGGQ 492
>gi|22327888|ref|NP_200462.2| pumilio 12 [Arabidopsis thaliana]
gi|313471423|sp|Q9LVC3.2|PUM12_ARATH RecName: Full=Pumilio homolog 12; Short=APUM-12; Short=AtPUM12
gi|332009392|gb|AED96775.1| pumilio 12 [Arabidopsis thaliana]
Length = 596
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 172/312 (55%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ LA+DQ G ++LQ S D ++ +F + + ELM +G ++ K +E CNE
Sbjct: 282 IYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNED 341
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + L + S D G+ +V+K+++ A + ++SALK L+
Sbjct: 342 QRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVET-AKREEEISIIISALKHGIVHLIKN 400
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ + F+++AA+ HC+ LA GC L + +G +++ ++
Sbjct: 401 VNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVS 460
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ GNYV+Q+V L+ + I L G+Y +LS+ KC S VV+KCLK
Sbjct: 461 EIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLK 520
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ H II EL+N ++ QV D YGNYVIQ AL +Q + +VH LV ++ ++
Sbjct: 521 LADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAAL----KQSKGNVHALLVDAIKLNI 576
Query: 312 AALRVMKYGSNV 323
++LR YG V
Sbjct: 577 SSLRTNPYGKKV 588
>gi|302756987|ref|XP_002961917.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
gi|300170576|gb|EFJ37177.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
Length = 322
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 171/312 (54%), Gaps = 9/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++S+A+DQ G ++LQ G + L K+F + +LM+ +G ++ K +E C E
Sbjct: 9 IYSIAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKLLEVCTED 68
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q L IL++ + S++ G+ +V+KLI+ + P + + S+L++ L+
Sbjct: 69 Q-RLEILRVVCSGDELISISLNMHGTRAVQKLIETLKS-PEQVSMITSSLEQGIVILIKD 126
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ N +N FI+ AA +HC+ + H GC L +D KG ++++++
Sbjct: 127 LNGNHVVQRCLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGVQKERLVG 186
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ + GNYVVQ++L E P++ + L GH+ L++ K S VV+KCLK
Sbjct: 187 EIAANALVLSQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLAMQKFSSNVVEKCLK 245
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ II EL S + Q+ D + NYVIQ AL T + ++H LV ++ HL
Sbjct: 246 QGADDKRARIIHELTKSAFLGQLLQDPFANYVIQCALTVT----KGALHASLVEAIRPHL 301
Query: 312 AALRVMKYGSNV 323
ALR YG +
Sbjct: 302 PALRSSPYGKRI 313
>gi|302775508|ref|XP_002971171.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
gi|300161153|gb|EFJ27769.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
Length = 321
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 171/312 (54%), Gaps = 9/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++S+A+DQ G ++LQ G + L K+F + +LM+ +G ++ K +E C E
Sbjct: 8 IYSIAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKLLEVCTED 67
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q L IL++ + S++ G+ +V+KLI+ + P + + S+L++ L+
Sbjct: 68 Q-RLEILRVVCSGDELISISLNMHGTRAVQKLIETLKS-PEQVSMITSSLEQGIVILIKD 125
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ N +N FI+ AA +HC+ + H GC L +D KG ++++++
Sbjct: 126 LNGNHVVQRCLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGVQKERLVG 185
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ + GNYVVQ++L E P++ + L GH+ L++ K S VV+KCLK
Sbjct: 186 EIAANALVLSQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLAMQKFSSNVVEKCLK 244
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ II EL S + Q+ D + NYVIQ AL T + ++H LV ++ HL
Sbjct: 245 QGADDKRARIIHELTKSAFLGQLLQDPFANYVIQCALTVT----KGALHASLVEAIRPHL 300
Query: 312 AALRVMKYGSNV 323
ALR YG +
Sbjct: 301 PALRSSPYGKRI 312
>gi|168015525|ref|XP_001760301.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688681|gb|EDQ75057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 172/316 (54%), Gaps = 8/316 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ G + K+F+ + G ELM +G ++ K +E C+ES
Sbjct: 34 IYLIAKDQHGCRFLQKKFDEGGPEDVQKIFYEIIGHITELMKDPFGNYLVQKLLEVCDES 93
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + IL++ D + S++ G+ +V+KLI+ + P + V++AL L+
Sbjct: 94 Q-RMEILRVVTTDGELVKISLNMHGTRAVQKLIETLKS-PDQVTMVITALTEGVVELIKD 151
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ + + FI+ AA HC+ +A H GC + +D ++++++
Sbjct: 152 LNGNHVVQRCLQKLSHEDSQFIFDAAAAHCVEIATHRHGCCVMQRCVDFASAPQKQRLVA 211
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+I+ NA +LS+ GNYVVQ++L L+ + + L G Y L++ K S VV+KCLK
Sbjct: 212 VIAANALTLSQDPYGNYVVQYILDLKQGWATSEVMLRLEGSYAFLAMQKFSSNVVEKCLK 271
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
H ++ EL S ++ Q+ D+Y NYVIQ+AL+ + +H LV ++ +L
Sbjct: 272 LGVEEHRGRLVRELTASSRLGQLLQDQYANYVIQSALSVC----KGPLHAGLVDAIRPYL 327
Query: 312 AALRVMKYGSNVYKWT 327
ALR YG + T
Sbjct: 328 PALRNSPYGKRILSRT 343
>gi|297739756|emb|CBI29938.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 168/315 (53%), Gaps = 13/315 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ ++ G++ ++K+F + G ELM+ +G ++ K +E C+E
Sbjct: 400 IYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSED 459
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + L S++ G+ SV+K+I+ + P V+++LK L+
Sbjct: 460 QRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKS-PEQFLMVVASLKPGIVNLIKD 518
Query: 134 KPGSSVILQCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G V CL+ P Y +F+++A HC+ LA GC L + + G R +
Sbjct: 519 LNGYHVAECCLQHLMPGYI---EFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLR 575
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L I NA LS+ GNYVVQ+V LE + + L G+Y LS+ K S VV+K
Sbjct: 576 LLSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEK 635
Query: 251 CLKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CLKY + II+E ++ Q+ Q+ D Y NYVIQTAL + + ++H L+ ++
Sbjct: 636 CLKYAGEERFARIIQEFMDHPQLDQMMLDPYANYVIQTALNHS----KGALHAALLEAIR 691
Query: 309 QHLAALRVMKYGSNV 323
H+ ALR YG V
Sbjct: 692 PHIPALRTNPYGKKV 706
>gi|225441625|ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
Length = 815
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 168/315 (53%), Gaps = 13/315 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ ++ G++ ++K+F + G ELM+ +G ++ K +E C+E
Sbjct: 501 IYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSED 560
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + L S++ G+ SV+K+I+ + P V+++LK L+
Sbjct: 561 QRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKS-PEQFLMVVASLKPGIVNLIKD 619
Query: 134 KPGSSVILQCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G V CL+ P Y +F+++A HC+ LA GC L + + G R +
Sbjct: 620 LNGYHVAECCLQHLMPGYI---EFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLR 676
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L I NA LS+ GNYVVQ+V LE + + L G+Y LS+ K S VV+K
Sbjct: 677 LLSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEK 736
Query: 251 CLKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CLKY + II+E ++ Q+ Q+ D Y NYVIQTAL + + ++H L+ ++
Sbjct: 737 CLKYAGEERFARIIQEFMDHPQLDQMMLDPYANYVIQTALNHS----KGALHAALLEAIR 792
Query: 309 QHLAALRVMKYGSNV 323
H+ ALR YG V
Sbjct: 793 PHIPALRTNPYGKKV 807
>gi|147861285|emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]
Length = 815
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 168/315 (53%), Gaps = 13/315 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ ++ G++ ++K+F + G ELM+ +G ++ K +E C+E
Sbjct: 501 IYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSED 560
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + L S++ G+ SV+K+I+ + P V+++LK L+
Sbjct: 561 QRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKS-PEQFLMVVASLKPGIVNLIKD 619
Query: 134 KPGSSVILQCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G V CL+ P Y +F+++A HC+ LA GC L + + G R +
Sbjct: 620 LNGYHVAECCLQHLMPGYI---EFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLR 676
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L I NA LS+ GNYVVQ+V LE + + L G+Y LS+ K S VV+K
Sbjct: 677 LLSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEK 736
Query: 251 CLKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CLKY + II+E ++ Q+ Q+ D Y NYVIQTAL + + ++H L+ ++
Sbjct: 737 CLKYAGEERFARIIQEFMDHPQLDQMMLDPYANYVIQTALNHS----KGALHAALLEAIR 792
Query: 309 QHLAALRVMKYGSNV 323
H+ ALR YG V
Sbjct: 793 PHIPALRTNPYGKKV 807
>gi|168003728|ref|XP_001754564.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694185|gb|EDQ80534.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 171/317 (53%), Gaps = 8/317 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ G + K+F + G ELM +G ++ K +E C+ES
Sbjct: 48 IYLIAKDQHGCRFLQKKFDEGGHEDVQKIFHEIIGHITELMKDPFGNYLVQKLLEVCDES 107
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + IL++ D + S++ G+ +V+KLI+ + P + V++AL L+
Sbjct: 108 Q-RMEILRVVTMDGELVKISLNMHGTRAVQKLIETLKS-PEQVTMVITALTEGVVELIKD 165
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ + + FI+ AA HC+ +A H GC + +D ++++++
Sbjct: 166 LNGNHVVQRCLQKLCHEDSQFIFDAAAAHCVEIATHRHGCCVMQRCVDFASAPQKQRLVA 225
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+I+ NA +LS+ GNYVVQ++L L+ + + L G Y L++ K S VV+KCLK
Sbjct: 226 VIAANALALSQDPYGNYVVQYILDLKQGWATSEVMVRLEGSYAFLAMQKFSSNVVEKCLK 285
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ ++ EL S ++ Q+ D+Y NYVIQ+AL+ + +H LV ++ +L
Sbjct: 286 LGMEENRGRLVRELTASSRLGQLLQDQYANYVIQSALSVC----KGPLHAGLVDAIRPYL 341
Query: 312 AALRVMKYGSNVYKWTT 328
ALR YG + T
Sbjct: 342 PALRNSPYGKRILSRTN 358
>gi|8809626|dbj|BAA97177.1| unnamed protein product [Arabidopsis thaliana]
Length = 604
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 172/320 (53%), Gaps = 15/320 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ LA+DQ G ++LQ S D ++ +F + + ELM +G ++ K +E CNE
Sbjct: 282 IYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNED 341
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + L + S D G+ +V+K+++ A + ++SALK L+
Sbjct: 342 QRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVE-TAKREEEISIIISALKHGIVHLIKN 400
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ + F+++AA+ HC+ LA GC L + +G +++ ++
Sbjct: 401 VNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVS 460
Query: 194 LISVNAASLSRHRSG--------NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
I+ NA LS+ G NYV+Q+V L+ + I L G+Y +LS+ KC S
Sbjct: 461 EIASNALLLSQDPFGIDANFFCRNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSS 520
Query: 246 FVVQKCLKYQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
VV+KCLK + H II EL+N ++ QV D YGNYVIQ AL +Q + +VH L
Sbjct: 521 NVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAAL----KQSKGNVHALL 576
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V ++ ++++LR YG V
Sbjct: 577 VDAIKLNISSLRTNPYGKKV 596
>gi|218186872|gb|EEC69299.1| hypothetical protein OsI_38363 [Oryza sativa Indica Group]
Length = 770
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 166/314 (52%), Gaps = 8/314 (2%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
LA+DQ G ++LQ + G S + K+F + EL+ +G ++ K +E CN Q
Sbjct: 455 LAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQKLLEECNHDQKM 514
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
I+ +IT + + S D G+ V+K+I+ + + P + V+ AL LMM G
Sbjct: 515 HIVYEITKRPGQLIKFSCDMHGTRVVQKVIETI-NSPDEVSMVVCALSSGAITLMMDANG 573
Query: 137 SSVILQCLEP-SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
V L+CL+ S+ HK F+ A+E+ LA QGC + I + ++ Q+L+ I
Sbjct: 574 CHVALRCLQKFSHEHKA-FLLNVAMEYYFELAQDRQGCCIIQKCILHANKEQKNQLLYNI 632
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+ A LS H+ GNYVVQ++L L + D I L GH+ LS+ K S VV+KCLK
Sbjct: 633 TSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEGHFGSLSMQKSSSNVVEKCLKEA 692
Query: 256 NAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAA 313
+ II EL+N ++L + D YGNYVIQTAL E + +V L+ ++ H+AA
Sbjct: 693 SWPKRVKIIHELINDPKLLHILIDPYGNYVIQTALKEC---EDAAVRAVLIGAIRPHVAA 749
Query: 314 LRVMKYGSNVYKWT 327
LR +G + T
Sbjct: 750 LRNNMFGKRILSKT 763
>gi|255545698|ref|XP_002513909.1| conserved hypothetical protein [Ricinus communis]
gi|223546995|gb|EEF48492.1| conserved hypothetical protein [Ricinus communis]
Length = 1204
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 170/312 (54%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +AQDQ G ++LQ G S+ + +F + ELM +G +V KF++ CNE
Sbjct: 892 IYLMAQDQNGCRWLQRIFDEGTSQDIQIIFNEIIDHVVELMLKPFGNYVIQKFLDVCNEE 951
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ +T + L ++ +G+ +V+KLI+ + + + VM AL+ F L+
Sbjct: 952 QRLQIVFMVTEEPGQLLRICLNTYGTRAVQKLIETLKTRQQISFVVM-ALRPGFLDLVKD 1010
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +CL+ +N N FI+ AA + + +A H GC + I + G R++++
Sbjct: 1011 QNGNHVIQRCLQCLHNDDNKFIFDAAAKFSVQIATHRHGCCVMQRCITHSTGKHREKLIT 1070
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS NA L++ GNYVVQ+++ L++P + R HYV LS+ K S VV+KCLK
Sbjct: 1071 EISKNALLLAQDPFGNYVVQYIVELKNPSAAVNLLSQFRRHYVHLSMQKFSSHVVEKCLK 1130
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + + I+ EL++ + Q+ D + NYVIQ+ALA T R S LV ++ H+
Sbjct: 1131 HLEESREQIVHELISVSRFEQLLQDPFANYVIQSALAVTKGPLRAS----LVAAVRPHV- 1185
Query: 313 ALRVMKYGSNVY 324
LR Y ++
Sbjct: 1186 ILRTNPYSKRIF 1197
>gi|297746500|emb|CBI16556.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 168/317 (52%), Gaps = 9/317 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +++DQ G ++LQ + G + K+F + ELM+ +G ++ K +E C E
Sbjct: 410 IYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTED 469
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + + S + G+ +V+K+I+ + ++S+LK L+
Sbjct: 470 QQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETL-RTSEQFSMIVSSLKPGIVTLIKD 528
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V CL+ +F+++AA+ +C+ LA GC L + + +R +I++
Sbjct: 529 MNGNHVAQCCLQNLMPEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIY 588
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ GNYVVQ+V E P+ I I L G+Y DLSL K S VV+KCL+
Sbjct: 589 EITSNALILSQDPFGNYVVQYV--FEFPWAIVDILDQLEGNYGDLSLQKYSSNVVEKCLQ 646
Query: 254 YQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ H II+EL+N+ +I Q+ D YGNYVIQ AL + + ++H L+ ++ H+
Sbjct: 647 HAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAALNNS----KGAIHAALIEVIRSHV 702
Query: 312 AALRVMKYGSNVYKWTT 328
LR YG V T+
Sbjct: 703 HVLRTSPYGKKVLSCTS 719
>gi|449452779|ref|XP_004144136.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 698
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 163/311 (52%), Gaps = 6/311 (1%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+F +A+DQ G ++LQ G ++K+F + ELM +G ++ K +E CN++
Sbjct: 385 IFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDN 444
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ +IT ++ S D G+ +++K+I+ + ++ ++SALK LM
Sbjct: 445 QRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLK-TQEQVHMIVSALKSGIVTLMKN 503
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V CL+ + ++ AA C+ LA GC L + + R +++
Sbjct: 504 INGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLIN 563
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA +S+ + GNYVVQ +L L + +AI L G+Y DLS+ K S VV+KCL+
Sbjct: 564 EITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQ 623
Query: 254 YQNA-VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + I+ EL+N + ++ D YGNY IQTAL T ++H +LV ++ H+
Sbjct: 624 FAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNT----EGTLHTKLVEAIRPHVP 679
Query: 313 ALRVMKYGSNV 323
LR+ YG V
Sbjct: 680 VLRMSPYGKKV 690
>gi|449493598|ref|XP_004159368.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 731
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 163/311 (52%), Gaps = 6/311 (1%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+F +A+DQ G ++LQ G ++K+F + ELM +G ++ K +E CN++
Sbjct: 418 IFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDN 477
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ +IT ++ S D G+ +++K+I+ + ++ ++SALK LM
Sbjct: 478 QRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLK-TQEQVHMIVSALKSGIVTLMKN 536
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V CL+ + ++ AA C+ LA GC L + + R +++
Sbjct: 537 INGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLIN 596
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA +S+ + GNYVVQ +L L + +AI L G+Y DLS+ K S VV+KCL+
Sbjct: 597 EITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQ 656
Query: 254 YQNA-VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + I+ EL+N + ++ D YGNY IQTAL T ++H +LV ++ H+
Sbjct: 657 FAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNT----EGTLHTKLVEAIRPHVP 712
Query: 313 ALRVMKYGSNV 323
LR+ YG V
Sbjct: 713 VLRMSPYGKKV 723
>gi|225435792|ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
Length = 711
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 168/317 (52%), Gaps = 9/317 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +++DQ G ++LQ + G + K+F + ELM+ +G ++ K +E C E
Sbjct: 399 IYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTED 458
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + + S + G+ +V+K+I+ + ++S+LK L+
Sbjct: 459 QQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETL-RTSEQFSMIVSSLKPGIVTLIKD 517
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V CL+ +F+++AA+ +C+ LA GC L + + +R +I++
Sbjct: 518 MNGNHVAQCCLQNLMPEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIY 577
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ GNYVVQ+V E P+ I I L G+Y DLSL K S VV+KCL+
Sbjct: 578 EITSNALILSQDPFGNYVVQYV--FEFPWAIVDILDQLEGNYGDLSLQKYSSNVVEKCLQ 635
Query: 254 YQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ H II+EL+N+ +I Q+ D YGNYVIQ AL + + ++H L+ ++ H+
Sbjct: 636 HAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAALNNS----KGAIHAALIEVIRSHV 691
Query: 312 AALRVMKYGSNVYKWTT 328
LR YG V T+
Sbjct: 692 HVLRTSPYGKKVLSCTS 708
>gi|115488610|ref|NP_001066792.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|108862690|gb|ABA98278.2| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649299|dbj|BAF29811.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|215697156|dbj|BAG91150.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617094|gb|EEE53226.1| hypothetical protein OsJ_36125 [Oryza sativa Japonica Group]
Length = 769
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 165/314 (52%), Gaps = 8/314 (2%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
LA+DQ G ++LQ + G S + K+F + EL+ +G ++ K +E CN Q
Sbjct: 454 LAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQKLLEECNHDQKM 513
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
I+ +IT + + S D G+ V+K+I+ + + P + V+ AL LMM G
Sbjct: 514 HIVYEITKRPGQLIKFSCDMHGTRVVQKVIETI-NSPDEVSMVVCALSSGAITLMMDANG 572
Query: 137 SSVILQCLEP-SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
V L+CL+ S+ HK F+ A+E+ LA QGC + I + ++ Q+L+ I
Sbjct: 573 CHVALRCLQKFSHEHKA-FLLNVAMEYYFELAQDRQGCCIIQKCILHANKEQKNQLLYNI 631
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+ A LS H+ GNYVVQ++L L + D I L H+ LS+ K S VV+KCLK
Sbjct: 632 TSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEDHFGSLSMQKSSSNVVEKCLKEA 691
Query: 256 NAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAA 313
+ II EL+N ++L + D YGNYVIQTAL E + +V L+ ++ H+AA
Sbjct: 692 SWPKRVKIIHELINDPKLLHILIDPYGNYVIQTALKEC---EDAAVRAVLIGAIRPHVAA 748
Query: 314 LRVMKYGSNVYKWT 327
LR +G + T
Sbjct: 749 LRNNMFGKRILSKT 762
>gi|302787963|ref|XP_002975751.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
gi|300156752|gb|EFJ23380.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
Length = 316
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 168/312 (53%), Gaps = 8/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ A+DQ G ++LQ+ S G +DK+F V +LM+ +G ++ K +E N++
Sbjct: 8 IYETAKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKLLEVSNDT 67
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ +T +L + S++ G+ +V+KLI+ + P + V S+L + L+
Sbjct: 68 QRREILRGVTRNGELVNI-SLNMHGTRAVQKLIETLKS-PEQVSMVTSSLMQGVVTLIKD 125
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ N FI AA HC+ + H GC L ID G++ ++
Sbjct: 126 SNGNHVVQKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQCHFLVS 185
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ + GNYVVQ++L LE ++ + + L G++ L++ K S VV+KCLK
Sbjct: 186 EIAANALILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNVVEKCLK 245
Query: 254 Y--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+++ II E++ S + Q+ D + NYVIQ AL+ + S+H LV ++ H+
Sbjct: 246 QSSEDSRALIIREIITSSLLSQLLQDPFANYVIQCALSVA----KGSLHTALVDAIRPHV 301
Query: 312 AALRVMKYGSNV 323
LR +G +
Sbjct: 302 PVLRSSPFGKRI 313
>gi|147789082|emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
Length = 1051
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 165/312 (52%), Gaps = 9/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +++DQ G ++LQ + G + K+F + ELM+ +G ++ K +E C E
Sbjct: 440 IYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTED 499
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ IT + + S + G+ +V+K+I+ + ++S+LK L+
Sbjct: 500 QQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETL-RTSEQFSMIVSSLKPGIVTLIKD 558
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V CL+ +F+ +AA+ +C+ LA GC L + + +R +I++
Sbjct: 559 MNGNHVAQCCLQNLMPEYREFLXEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIY 618
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ GNYVVQ+V E P+ I I L G+Y DLSL K S VV+KCL+
Sbjct: 619 EITSNALILSQDPFGNYVVQYV--FEFPWAIVDILDQLEGNYGDLSLQKYSSNVVEKCLQ 676
Query: 254 YQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ H II+EL+N+ +I Q+ D YGNYVIQ AL + + ++H L+ ++ H+
Sbjct: 677 HAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAALNNS----KGAIHAALIEVIRSHV 732
Query: 312 AALRVMKYGSNV 323
LR YG V
Sbjct: 733 HVLRTSPYGKKV 744
>gi|302783855|ref|XP_002973700.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
gi|300158738|gb|EFJ25360.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
Length = 316
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 168/312 (53%), Gaps = 8/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ A+DQ G ++LQ+ S G +DK+F V +LM+ +G ++ K +E N++
Sbjct: 8 IYETAKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKLLEVSNDT 67
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ +T +L + S++ G+ +V+KLI+ + P + V S+L + L+
Sbjct: 68 QRREILRVVTRNGELVNI-SLNMHGTRAVQKLIETLKS-PEQVSMVTSSLMQGVVTLIKD 125
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ N FI AA HC+ + H GC L ID G++ ++
Sbjct: 126 SNGNHVVQKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQCHFLVS 185
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA LS+ + GNYVVQ++L LE ++ + + L G++ L++ K S VV+KCLK
Sbjct: 186 EIAANALILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNVVEKCLK 245
Query: 254 Y--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+++ II E++ S + Q+ D + NYVIQ AL+ + S+H LV ++ H+
Sbjct: 246 QSSEDSRALIIREIITSSLLSQLLQDPFANYVIQCALSVA----KGSLHTALVDAIRPHV 301
Query: 312 AALRVMKYGSNV 323
LR +G +
Sbjct: 302 PVLRSSPFGKRI 313
>gi|356557551|ref|XP_003547079.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 770
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 163/313 (52%), Gaps = 7/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G + +F + ELM +G ++ K ++ C+E+
Sbjct: 456 IYLIAKDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVVELMMNPFGNYLMQKLLDVCDEN 515
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +IL +T + + S++ G+ V+K+I+ + + V++AL+ F L+
Sbjct: 516 QRMQMILMVTEEPGQLVRISLNTHGTRVVQKVIETLKTRQQISL-VVAALEPGFLALIKD 574
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ CL+ N N FI+ AA ++C+ +A H+ GC L I + +G R++++
Sbjct: 575 LNGNHVVQHCLQCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSRGEHREKLVE 634
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS NA L++ + GNYVVQ +L L P + G YV LS+ K GS VV+KCL
Sbjct: 635 EISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQFEGKYVHLSMQKFGSHVVEKCLA 694
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
N + +I ELL++ Q+ D + NYVIQ+A+ R VH LV ++ H
Sbjct: 695 VFNDENRSRVIHELLSAPHFEQLLQDPHANYVIQSAV----RHSEGHVHNLLVEAIESHK 750
Query: 312 AALRVMKYGSNVY 324
A R Y ++
Sbjct: 751 AISRNSPYSKKIF 763
>gi|357151863|ref|XP_003575930.1| PREDICTED: pumilio homolog 12-like [Brachypodium distachyon]
Length = 767
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 166/316 (52%), Gaps = 7/316 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ LA+DQ G ++LQ+ + G ++K+F + +LM +G ++ K +E C+E
Sbjct: 445 IYMLAKDQNGCRFLQKVFAQGSQEDVEKVFGEIIDHIGDLMVDPFGNYLVQKLLEGCSED 504
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ ++T + S + G+ +V+K+I+ + + P + V+SAL LM+
Sbjct: 505 QRMRILCEVTKMPGQLIAVSCNMHGTRAVQKIIETI-NSPDQVSKVVSALSPGAMHLMLD 563
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
GS V +CL+ F+ AA H L LA H+QGC + I++ ++ +L
Sbjct: 564 PNGSHVANRCLQKLLPESKVFLLDAATLHYLELATHQQGCCIIQKCIEHSNDEQKYSLLS 623
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I +A +LS + GNYV+Q +L+ + I L GH+ LS+ KCGS VV+ CL+
Sbjct: 624 NIISSALTLSDDQFGNYVIQSILNHNIGWATCKIVDELEGHFGYLSMQKCGSHVVENCLR 683
Query: 254 Y--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
Q+ II EL+N ++ + D++GN+VIQTAL + ++H V ++ H
Sbjct: 684 QAPQHKRDRIIGELMNDPKLPHIMVDQFGNFVIQTALEHC----KGTLHTAFVEAIRPHA 739
Query: 312 AALRVMKYGSNVYKWT 327
AA++ YG V T
Sbjct: 740 AAMQSHMYGKRVLSKT 755
>gi|356528751|ref|XP_003532961.1| PREDICTED: uncharacterized protein LOC100780898 [Glycine max]
Length = 763
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 7/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G + +F + ELM +G ++ K ++ C+E
Sbjct: 449 IYLIAKDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVAELMMNPFGNYLMQKLLDVCDEK 508
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q IIL +T + + S++ G+ V+KLI+ + + V++AL+ F L+
Sbjct: 509 QRMQIILMVTEEPGQLVRISLNIHGTRVVQKLIETLKTRQQISL-VVAALEPGFLALIKD 567
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ CL+ N N FI+ AA ++C+ +A H+ GC L I + +G R++++
Sbjct: 568 LNGNHVVQHCLQCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSRGEHREKLVE 627
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS NA L++ + GNYVVQ +L L P + YV LS+ K GS VV+KCL
Sbjct: 628 EISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQFERKYVHLSMQKFGSHVVEKCLA 687
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
N + +I ELL++ Q+ D + NYVIQ+AL R VH LV ++ H
Sbjct: 688 VFNDENQSRVIHELLSAPHFEQLLQDPHANYVIQSAL----RHSEGHVHNLLVEAIESHK 743
Query: 312 AALRVMKYGSNVY 324
A R Y ++
Sbjct: 744 AISRNSPYSKKIF 756
>gi|242085540|ref|XP_002443195.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
gi|241943888|gb|EES17033.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
Length = 678
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 165/317 (52%), Gaps = 6/317 (1%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ LA+DQ G ++LQ + G K+F V ELM +G ++ K +E CN+
Sbjct: 359 ELYHLAKDQNGCRFLQRIFTEGSQEDAQKVFDGVIEHIDELMIDPFGNYLIQKLLEQCND 418
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+Q I+ +IT + + + G+ V+K+I+ V+ + V+SAL LMM
Sbjct: 419 NQKMHILYEITKIPGQLVKVACNMHGTRVVQKVIETVS-TSDEVSMVVSALSHGAITLMM 477
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
GS V +CL+ F+ AA ++C+ LA QGC + I + ++ ++L
Sbjct: 478 DANGSHVAHRCLQKLSPKCKAFLLNAATKYCVELAKDRQGCCIIQKCIIHANKEQKNKLL 537
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ I+ A +L+ H+ GNYV+Q +L L+ + ++ I L G Y LS+ KC S VV+KCL
Sbjct: 538 YSITGRALNLAEHQYGNYVIQFILDLKVTWAMNEILDKLEGSYGYLSMQKCSSNVVEKCL 597
Query: 253 KYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
K II EL+N ++ + D+YGNYVIQTA E +V LV ++ H
Sbjct: 598 KEARGPKRAKIILELINDPKLQNILLDQYGNYVIQTAFREC---GDAAVEAALVRAIKPH 654
Query: 311 LAALRVMKYGSNVYKWT 327
++ALR +G + T
Sbjct: 655 ISALRNNMFGKRILSKT 671
>gi|319411787|emb|CBQ73830.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1016
Score = 147 bits (370), Expect = 1e-32, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 160/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+F+L +DQ G ++LQ+ L + D +F ELM+ +G ++ K +E C +
Sbjct: 534 DIFALCKDQHGCRFLQKKLEESNPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTD 593
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q LI+ + + + S++ G+ +V+K+I ++ P ++ ++ AL L+
Sbjct: 594 EQRNLIVELVASE---LVTISLNMHGTRAVQKMIDFLS-TPRQIHSIIVALSMNVVTLIK 649
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ V+ +CL N FIY A HC+ +A H GC L ID+ ++R Q++
Sbjct: 650 DLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRVQLV 709
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ+VL L P DA+ G+ LS+ K S V++KC+
Sbjct: 710 AEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVMEKCI 769
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ +IEELLN ++ ++ D + NYV+QT+L R+ RLV ++
Sbjct: 770 RVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADPVQRM----RLVECIRPI 825
Query: 311 LAALRVMKYGSNV 323
L +R YG +
Sbjct: 826 LPVIRNTPYGKRI 838
>gi|407917960|gb|EKG11259.1| hypothetical protein MPH_11603 [Macrophomina phaseolina MS6]
Length = 1088
Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 163/320 (50%), Gaps = 10/320 (3%)
Query: 6 FEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGK 65
F+ HD+ L +DQ G +YLQ+ + + I+ K+F +LM + ++ K
Sbjct: 661 FDSLMPHDIVELCKDQHGCRYLQKQIEGRNLDIVRKIFEATKDHVVDLMQDPFANYLCQK 720
Query: 66 FIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKR 125
E CN+ Q ++ Q + ++++ G+ +++K+I+ V+ + ++ AL+
Sbjct: 721 MYEFCNDEQRTALVHNAAPQ---MVKIALNQHGTRALQKMIEYVSTAEQINI-IIEALRH 776
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L+ G+ VI +CL + + FI++A C+ + H GC L ID+ G
Sbjct: 777 NVVTLIQDLNGNHVIQKCLNHLGSKDSQFIFEAVGAACIVVGTHRHGCCVLQRCIDHASG 836
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+R ++ I+ NA SL + GNYVVQ++L L++ +C A RG+ LS K S
Sbjct: 837 DQRIALIGAITANAYSLVQDPFGNYVVQYILDLQEEQFTIPMCNAFRGNVPMLSKQKFSS 896
Query: 246 FVVQKCLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
VV+KC++ NA +IEELL ++ ++ D Y NYV+QT+L ++ RL
Sbjct: 897 NVVEKCIRVSNAETRRNLIEELLIPGELEKLIRDSYANYVVQTSLDYADAPTKI----RL 952
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V ++ L+A+R YG +
Sbjct: 953 VEAIRPMLSAIRTTPYGRRI 972
>gi|308812071|ref|XP_003083343.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
gi|116055223|emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
Length = 340
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 173/334 (51%), Gaps = 18/334 (5%)
Query: 4 IAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVF 63
++ E+C + LA+DQ G ++LQ S+ +D + + ELM +G ++
Sbjct: 6 VSVENCVGQ-ISVLARDQHGCRFLQRKFDEEGSKAVDLCYDEIIAEAVELMMDPFGNYLV 64
Query: 64 GKFIESCNESQL-----ALIILKITFQDQLFLLASV--DKFGSSSVKKLIKVVAHLPPLL 116
K IE C++ Q A+ ++K D L L ++ + G+ +V+KLI+++ + P +
Sbjct: 65 QKLIECCSDEQRSGVLRAVSVVKADNPDGLPELVTIALNTHGTRAVQKLIEML-NSPEEV 123
Query: 117 YHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINL 176
+AL+ L+ G+ VI +CL+ N FIY AA HC+ +A H GC L
Sbjct: 124 SLATTALRPGVVTLIKDLNGNHVIQRCLQRLSCDDNQFIYDAAKVHCVEIATHRHGCCVL 183
Query: 177 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYV 236
ID+ +R+ ++H I+ A LS+ GNYVVQ++L L + + L G+Y
Sbjct: 184 QRCIDHATEEQRRPLVHEIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQLLGNYA 243
Query: 237 DLSLTKCGSFVVQKCLKYQNAV-----HYIIEELLNSDQILQVANDKYGNYVIQTALAET 291
+LS+ K S VV+KCLK +A + ++ E++ S + ++ D YGNYV+Q+ L T
Sbjct: 244 ELSMQKFSSNVVEKCLKLADASLEKNRNTVVREIMQSPLLDRLLMDPYGNYVVQSTLTVT 303
Query: 292 MRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
+ +H LV +++ HL ++ +G + +
Sbjct: 304 ----KGVLHTELVERIRPHLPLIKNSPFGKRILR 333
>gi|224063219|ref|XP_002301047.1| predicted protein [Populus trichocarpa]
gi|222842773|gb|EEE80320.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 167/312 (53%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +AQDQ G +LQ+ G S+ ++ +F + G ELM +G +V K ++ C+E
Sbjct: 15 VYLMAQDQNGCLFLQKIFEEGTSQDVELIFDEIIGHIVELMLKPFGNYVVQKLLDVCDEK 74
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
LI+ IT + + + ++ +G+ V++LI+ + + V+ ALK L+
Sbjct: 75 HRLLIVRMITNEPGMLVRICLNTYGTRVVQRLIETLKTRQQI-SSVILALKPGVLDLVKD 133
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +CL N N FI+ AA + C+ +A H GC + I + G +++
Sbjct: 134 QNGNHVIQRCLNLLSNEDNKFIFDAATKFCVEIATHRHGCCVMQRCIAHATGKHWDKLMT 193
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N L++ GNYVVQ+++ L++ I + +G+YV LS+ K GS VV++CL
Sbjct: 194 EISRNGLLLAQDPFGNYVVQYIMDLKNSCSIAILLSQFKGNYVHLSMQKFGSHVVERCLG 253
Query: 254 -YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
++ + I+ ELL+ + Q+ D + NYVIQ ALA T + ++H LV ++ H +
Sbjct: 254 HFEESRSQIVLELLSVPRFEQLLQDPFANYVIQCALAVT----KGALHSLLVEAVRPH-S 308
Query: 313 ALRVMKYGSNVY 324
LR Y ++
Sbjct: 309 TLRTSPYCKRIF 320
>gi|115451267|ref|NP_001049234.1| Os03g0191700 [Oryza sativa Japonica Group]
gi|108706609|gb|ABF94404.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113547705|dbj|BAF11148.1| Os03g0191700 [Oryza sativa Japonica Group]
Length = 708
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 162/305 (53%), Gaps = 8/305 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ G + D +F + ELM+ + ++ K ++ C+E
Sbjct: 396 IYFMAKDQNGCRFLQQKFEEGKDQA-DLIFEGIIDHIPELMANSFANYLVQKLLDVCDEE 454
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q II +T L S++ G+ S++KLI+ V ++ ++SAL+ F L+
Sbjct: 455 QRLRIIAVLTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIML-IISALQPGFIHLVND 513
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ +N FI++AA HC+ +A + GC L + I N G + +++
Sbjct: 514 PNGNHVIQKCLKNFDAEENKFIFEAAATHCVEMAINRHGCCVLQSCISNAYGEYQIKLIM 573
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I + L++ + GNYV+Q+VL L+ PF + +G+YV LS K GS VV+KCLK
Sbjct: 574 QICADGLYLAQDQFGNYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNVVEKCLK 633
Query: 254 Y--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ II EL+++ Q+ D Y NYVI TAL +T R + LV + H
Sbjct: 634 VFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALVQT----RGHLRSALVNAILPHE 689
Query: 312 AALRV 316
A+R
Sbjct: 690 EAIRT 694
>gi|219887147|gb|ACL53948.1| unknown [Zea mays]
gi|413916364|gb|AFW56296.1| hypothetical protein ZEAMMB73_526143 [Zea mays]
Length = 685
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 157/313 (50%), Gaps = 6/313 (1%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ LA+DQ G ++LQ G K+F V ELM +G ++ K E CN+
Sbjct: 366 ELYHLAKDQNGCRFLQRIFIEGSREDARKVFDGVIEHIDELMVDPFGNYLIQKIFEKCND 425
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+Q I+ +IT + + + G+ V+K+I+ ++ + V+SAL LMM
Sbjct: 426 NQKMHILYEITKIPGQLIEVACNMHGTRVVQKVIESIS-TSDEVSMVVSALSHGAITLMM 484
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G V +CL F+ AA ++C+ LA QGC + I + +R ++L
Sbjct: 485 DSNGCHVAERCLLKLSPEGKAFLVNAATKYCVELAKDRQGCCIIQKCIAHASKEQRNRLL 544
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ I+ A L+ GNYV+Q VL L + + + L G Y LS KC S VV+KCL
Sbjct: 545 YSITTRALELAEDEYGNYVIQFVLGLGVAWATNEVLDKLEGSYGYLSTQKCSSNVVEKCL 604
Query: 253 KY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + II EL++ ++L V DKYGNYVIQTAL E+ + +V L+ ++ H
Sbjct: 605 REAPERERARIILELIHDPRLLNVLVDKYGNYVIQTALRES---EGTAVEAALIRAIKPH 661
Query: 311 LAALRVMKYGSNV 323
ALR YG V
Sbjct: 662 AGALRNNMYGKRV 674
>gi|156059478|ref|XP_001595662.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980]
gi|154701538|gb|EDO01277.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1085
Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 161/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++++L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 667 EIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCND 726
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ ++I + + ++++ G+ +++K+I+ ++ P + ++ AL+ L+
Sbjct: 727 EERTVLIENASHD---LVRIALNQHGTRALQKMIEFIS-TPGQVQTIIGALRFRVVELIQ 782
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FI+ A +HC+ + H GC L ID+ G ++ ++
Sbjct: 783 DLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQKAWLI 842
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
IS NA L + GNYVVQ++L L +P + + G LS K S V++KCL
Sbjct: 843 RQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFGGRVAQLSKQKFSSNVIEKCL 902
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +IEE+L +Q+ + D + NYVIQTAL ++ RL+ ++ H
Sbjct: 903 RCAQEPSKDMLIEEMLQPNQLDSLLRDSFANYVIQTALDYA----NPNMKTRLIEAIRPH 958
Query: 311 LAALRVMKYGSNV 323
L A+R YG +
Sbjct: 959 LPAIRTTPYGRRI 971
>gi|396458556|ref|XP_003833891.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
gi|312210439|emb|CBX90526.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
Length = 1025
Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 163/314 (51%), Gaps = 10/314 (3%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
H++++L +DQ G ++LQ+ L + + +F + ELM+ +G ++ K +E CN
Sbjct: 616 HEIYTLCKDQHGCRFLQKKLEDRNHEHIQIIFEETNPHVVELMTDPFGNYLCQKLLEFCN 675
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ Q ++ + + ++++ G+ +++K+I+ ++ ++ AL L+
Sbjct: 676 DEQRNTLVRNAS---PAMVSIALNQHGTRALQKMIEYIS-TEDQTQMIIQALSGQVVDLI 731
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL + FI+ A EHC+ + H GC L ID+ G ++ +
Sbjct: 732 QDLNGNHVIQKCLNHLKPSEAQFIFDAVGEHCVTVGTHRHGCCVLQRCIDHAAGYQKIDL 791
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+H I+ NA SL + GNYVVQ++L L D +C + G +LS K S V++KC
Sbjct: 792 VHRITQNAFSLVQDPFGNYVVQYILDLNDENFTTPMCKSFEGRVPELSKQKFSSNVIEKC 851
Query: 252 LKYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ N A +I+ELL+ ++ + D+YGNYVIQTAL L++H L+ ++
Sbjct: 852 IRCANMDAKAMMIQELLDMVELEMLMRDQYGNYVIQTAL--EFAPGELALH--LIESMRP 907
Query: 310 HLAALRVMKYGSNV 323
L +R YG +
Sbjct: 908 ILPTIRATPYGRRI 921
>gi|388855017|emb|CCF51344.1| uncharacterized protein [Ustilago hordei]
Length = 1013
Score = 142 bits (359), Expect = 2e-31, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+F+L +DQ G ++LQ+ L D +F ELM+ +G ++ K +E C +
Sbjct: 534 DIFALCKDQHGCRFLQKKLEESMPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTD 593
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q LI+ + + + S++ G+ +V+K+I ++ + + ++ AL L+
Sbjct: 594 EQRNLIVELVAPE---LVTISLNMHGTRAVQKMIDFLSTRRQI-HSIIVALSMNVVTLIK 649
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ V+ +CL N FIY A HC+ +A H GC L ID+ S+R Q++
Sbjct: 650 DLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASESQRVQLV 709
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ+VL L P DA+ G+ LS+ K S V++KC+
Sbjct: 710 AEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVIEKCI 769
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ +IEELLN ++ ++ D + NYV+QT+L R+ RLV ++
Sbjct: 770 RVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADAVQRM----RLVECIRPI 825
Query: 311 LAALRVMKYGSNV 323
L +R YG +
Sbjct: 826 LPVIRNTPYGKRI 838
>gi|154316386|ref|XP_001557514.1| hypothetical protein BC1G_04124 [Botryotinia fuckeliana B05.10]
Length = 1088
Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 160/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++++L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 670 EIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCND 729
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ ++I + + ++++ G+ +++K+I+ ++ + ++ AL+ L+
Sbjct: 730 EERTVLIENASHD---LVRIALNQHGTRALQKMIEFIS-TAGQVQTIIGALRYRVVELIQ 785
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FI+ A +HC+ + H GC L ID+ G ++ ++
Sbjct: 786 DLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQKAWLI 845
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
IS NA L + GNYVVQ++L L +P + + G LS K S V++KCL
Sbjct: 846 RQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQKFSSNVIEKCL 905
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +IEE+L Q+ + D + NYVIQTAL L++ RL+ ++ H
Sbjct: 906 RCAQEPSKDMLIEEMLQPTQLDGLLRDSFANYVIQTALDYA----NLNMKTRLIEAIRPH 961
Query: 311 LAALRVMKYGSNV 323
L A+R YG +
Sbjct: 962 LPAIRTTPYGRRI 974
>gi|336468401|gb|EGO56564.1| hypothetical protein NEUTE1DRAFT_65206 [Neurospora tetrasperma FGSC
2508]
gi|350289343|gb|EGZ70568.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 676
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 162/312 (51%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+++L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E C+E
Sbjct: 270 IYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSED 329
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I T + +++ G+ +++K+I V+ P + ++ AL+ L+
Sbjct: 330 ERTVLIRNATSD---MVRIALNAHGTRALQKMIDSVSS-PAQINLIIEALRNRVVELIQD 385
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A ++C+ + H GC L ID+ G+++ ++
Sbjct: 386 LNGNHVIQKCLNKLNATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGAKKIWLIE 445
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA +L + GNYVVQ+++ L +P + + G LS K S VV+KCL+
Sbjct: 446 RITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVEKCLR 505
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
N+ I+ E+++ ++I Q+ D YGNYV+QTAL S+ +LV ++ HL
Sbjct: 506 CASPNSKDRIVSEIMSQNEIKQLMQDSYGNYVVQTALDYATP----SMKHQLVEAIRPHL 561
Query: 312 AALRVMKYGSNV 323
A+R YG +
Sbjct: 562 PAVRATPYGRRI 573
>gi|85083831|ref|XP_957198.1| hypothetical protein NCU01775 [Neurospora crassa OR74A]
gi|18376126|emb|CAD21191.1| conserved hypothetical protein [Neurospora crassa]
gi|28918285|gb|EAA27962.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 677
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 162/312 (51%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+++L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E C+E
Sbjct: 271 IYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSED 330
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I T + +++ G+ +++K+I V+ P + ++ AL+ L+
Sbjct: 331 ERTVLIRNATSD---MVRIALNAHGTRALQKMIDSVSS-PAQINLIIEALRNRVVELIQD 386
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A ++C+ + H GC L ID+ G+++ ++
Sbjct: 387 LNGNHVIQKCLNKLNATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGAKKIWLIE 446
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA +L + GNYVVQ+++ L +P + + G LS K S VV+KCL+
Sbjct: 447 RITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVEKCLR 506
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
N+ I+ E+++ ++I Q+ D YGNYV+QTAL S+ +LV ++ HL
Sbjct: 507 CASPNSKDRIVSEIMSQNEIKQLMQDSYGNYVVQTALDYATP----SMKHQLVEAIRPHL 562
Query: 312 AALRVMKYGSNV 323
A+R YG +
Sbjct: 563 PAVRATPYGRRI 574
>gi|71018695|ref|XP_759578.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
gi|46099336|gb|EAK84569.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
Length = 1058
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 161/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+F+L +DQ G ++LQ+ L G+ D +F ELM+ +G ++ K +E C +
Sbjct: 544 DIFALCKDQHGCRFLQKKLEEGNPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTD 603
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q LI+ + + + S++ G+ +V+K+I ++ P ++ ++ AL L+
Sbjct: 604 EQRNLIVELVAPE---LVTISLNMHGTRAVQKMIDFLS-TPRQIHSIIVALSMNVVTLIK 659
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ V+ +CL N FIY A HC+ +A H GC L ID+ ++R Q++
Sbjct: 660 DLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRVQLV 719
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ+VL L P DA+ G+ LS+ K S V++KC+
Sbjct: 720 AEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVIEKCI 779
Query: 253 KYQNA--VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ +IEELLN ++ ++ D + NYV+QT+L R+ RLV ++
Sbjct: 780 RVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADPVQRM----RLVECIRPI 835
Query: 311 LAALRVMKYGSNV 323
L +R YG +
Sbjct: 836 LPVIRNTPYGKRI 848
>gi|393218870|gb|EJD04358.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1018
Score = 140 bits (354), Expect = 7e-31, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 160/322 (49%), Gaps = 20/322 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G +YLQ+ L G++ D +F G ELM+ +G ++ K +E +
Sbjct: 540 EIASLCKDQHGCRYLQKKLEEGNAEHRDMIFRETFGHFAELMTDPFGNYLCQKLLEYSTD 599
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA-------HLPPLLYHVMSALKR 125
Q +I + Q + S++ G+ +V+K+I ++ ++ ++ AL
Sbjct: 600 DQRNVICESVA---QDLVNISLNMHGTRAVQKMIDFLSTQRQADLRYNAQIHSIIVALSL 656
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L+ G+ VI +CL N FIY A +C+ +A H GC L ID+
Sbjct: 657 HVVVLIKDLNGNHVIQKCLNKLTPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASD 716
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+R Q+++ I+ NA +L + GNYVVQ++L L D DA+ G+ LS+ K S
Sbjct: 717 HQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSS 776
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR- 302
V++KC++ N +IEELLN ++ ++ D +GNY +QTAL D QR
Sbjct: 777 NVIEKCIRVAEHNTRKMLIEELLNRTRLEKLLRDSFGNYCVQTAL------DYAESGQRA 830
Query: 303 -LVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 831 LLVEGIRPILPLIRNTPYGKRI 852
>gi|66804327|ref|XP_635942.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
gi|60464289|gb|EAL62439.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
Length = 1036
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 16/316 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G ++LQ+ L D ++ + +F V + ELM+ +G ++ K +E CN+
Sbjct: 716 IYPLCRDQHGCRFLQKKLEESDLQLTEIIFKEVCDYMLELMTDPFGNYLCQKLLEHCNDR 775
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q II K+ + S++ G+ +V+K+I+ + P + + +LK L+
Sbjct: 776 QRLTIIEKVGTD---IVRISMNMHGTRAVQKMIEYLT-TPEQIQLIKRSLKDSVVPLIQD 831
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEH--CLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL N FIY A C+ +A H GC L ID+ S++ Q+
Sbjct: 832 LNGNHVIQKCLNKLSPQDNQFIYDAVSSDGSCIAVATHRHGCCVLQRCIDHASESQKLQL 891
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALR--GHYVDLSLTKCGSFVVQ 249
+ + N+ L + GNYVVQ+VL L PF A A R GH L+ K S VV+
Sbjct: 892 IQEVIANSLVLVQDPYGNYVVQYVLDL--PFQGLATEMAKRFVGHVPILATQKFSSNVVE 949
Query: 250 KCLKYQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
KCL +A+ Y+I+E+++ D +L + D Y NYVIQT+L + H +LV +
Sbjct: 950 KCLHVADAITRGYLIQEVIDYDNLLHLLQDPYANYVIQTSLTISEPHQ----HTKLVEAI 1005
Query: 308 QQHLAALRVMKYGSNV 323
+ HL L+ YG +
Sbjct: 1006 RPHLPLLKNTPYGKRI 1021
>gi|393247747|gb|EJD55254.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1028
Score = 140 bits (353), Expect = 8e-31, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 161/315 (51%), Gaps = 14/315 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G +YLQ+ L G D +F G ELM+ +G ++ K +E ++
Sbjct: 585 EIASLCKDQHGCRYLQKKLEEGVPEHRDIIFHETFGHFAELMTDPFGNYLCQKLVEFSSD 644
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I + Q + S++ G+ +V+K+I ++ P ++ ++ AL L+
Sbjct: 645 EQRNVICESVA---QDLVTISLNMHGTRAVQKMIDFLS-TPRQIHAIIVALSLHVVTLIK 700
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL N FIY A ++C+ +A H GC L ID+ S+R Q++
Sbjct: 701 DLNGNHVIQKCLNKLVPEDNQFIYNAVAQNCVEVATHRHGCCVLQRCIDHASDSQRVQLV 760
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L D D + G+ LS+ K S V++KC+
Sbjct: 761 QEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFSGNVCALSVQKFSSNVIEKCV 820
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTKLQ 308
+ + +I+ELL+ +++ ++ D +GNY +QTAL D QR LV ++
Sbjct: 821 RVAEPHTRKLLIDELLHRNRLEKLLRDSFGNYCVQTAL------DYAEPTQRALLVEGIR 874
Query: 309 QHLAALRVMKYGSNV 323
L +R YG +
Sbjct: 875 PILPMIRNTPYGKRI 889
>gi|255085754|ref|XP_002505308.1| predicted protein [Micromonas sp. RCC299]
gi|226520577|gb|ACO66566.1| predicted protein [Micromonas sp. RCC299]
Length = 336
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 165/329 (50%), Gaps = 14/329 (4%)
Query: 5 AFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFG 64
+ E C + LA+DQ G ++LQ ++ F + +LM +G ++
Sbjct: 7 SVEECVGQ-VGVLARDQHGCRFLQRKFDEEGEEAVNLCFEEIIAEVVDLMMDPFGNYLVQ 65
Query: 65 KFIESCNESQLALIILKITFQ-DQLFLLASV--DKFGSSSVKKLIKVVAHLPPLLYHVMS 121
K +E C + Q ++ + D + L SV + G+ +V+KL++ + P +
Sbjct: 66 KLLECCTDEQRMGVLRAVAKDGDGVPELVSVALNTHGTRAVQKLVETL-RTPEQVALATE 124
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
ALK L+ G+ VI +CL+ N F+Y AA + C+ +A H GC L ID
Sbjct: 125 ALKPGVVTLIKDLNGNHVIQRCLQRLGAEDNQFVYDAARKCCVEIATHRHGCCVLQRCID 184
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ +R+ ++ I+ A LS+ GNYVVQ++L L P+ + L G+Y +LS+
Sbjct: 185 HAADGQRRALVQEIAAQALVLSQDPFGNYVVQYILDLSLPWANAEVMMRLAGNYAELSMQ 244
Query: 242 KCGSFVVQKCLKYQNAV-----HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDR 296
K S VV+KCLK +A + ++ E++ S + ++ D YGNYV+Q+ L+ T +
Sbjct: 245 KFSSNVVEKCLKLADASLEEHRNVVVREIMTSPLLDRLLMDPYGNYVVQSTLSVT----K 300
Query: 297 LSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
++H LV +++ HL ++ +G + +
Sbjct: 301 GALHSELVDRIRPHLPLIKNSPFGKRILR 329
>gi|9454526|gb|AAF87849.1|AC073942_3 Contains similarity to RNA binding protein PufA from Dictyostelium
discoideum gi|5106561 and contains multiple
Pumilio-family RNA binding PF|00806 domains [Arabidopsis
thaliana]
Length = 514
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 164/312 (52%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G + +F V ELM +G ++ K ++ CNE
Sbjct: 202 VYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEE 261
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q IIL +T + + S++ +G+ V++L++ + + V SAL+ F L+
Sbjct: 262 QRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISL-VKSALRPGFLNLIRD 320
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N+FI++ A + C+ +A H GC L I G +R++++
Sbjct: 321 LNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVT 380
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N+ L++ GNY VQ VL L D I A+ L+GHYV+LS+ K S +V++CL
Sbjct: 381 EISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLT 440
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + I+ EL++ + D Y N+VIQ ALA T + S+H LV ++ H +
Sbjct: 441 HCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVT----KGSLHATLVEVIRPH-S 495
Query: 313 ALRVMKYGSNVY 324
LR Y ++
Sbjct: 496 ILRNNPYCKRIF 507
>gi|15219849|ref|NP_173643.1| protein pumilio 8 [Arabidopsis thaliana]
gi|313471411|sp|Q9LM20.2|PUM8_ARATH RecName: Full=Putative pumilio homolog 8, chloroplastic;
Short=APUM-8; Short=AtPUM8; Flags: Precursor
gi|332192094|gb|AEE30215.1| protein pumilio 8 [Arabidopsis thaliana]
Length = 515
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 164/312 (52%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G + +F V ELM +G ++ K ++ CNE
Sbjct: 203 VYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEE 262
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q IIL +T + + S++ +G+ V++L++ + + V SAL+ F L+
Sbjct: 263 QRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISL-VKSALRPGFLNLIRD 321
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N+FI++ A + C+ +A H GC L I G +R++++
Sbjct: 322 LNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVT 381
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N+ L++ GNY VQ VL L D I A+ L+GHYV+LS+ K S +V++CL
Sbjct: 382 EISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLT 441
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + I+ EL++ + D Y N+VIQ ALA T + S+H LV ++ H +
Sbjct: 442 HCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVT----KGSLHATLVEVIRPH-S 496
Query: 313 ALRVMKYGSNVY 324
LR Y ++
Sbjct: 497 ILRNNPYCKRIF 508
>gi|336272059|ref|XP_003350787.1| hypothetical protein SMAC_12592 [Sordaria macrospora k-hell]
gi|380094950|emb|CCC07452.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 670
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 161/312 (51%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+++L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E C+E
Sbjct: 247 IYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSED 306
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I T + +++ G+ +++K+I V+ P + ++ AL+ L+
Sbjct: 307 ERTVLIRNATPD---MVRIALNAHGTRALQKMIDSVSS-PVQINLIIEALRNRVVELIQD 362
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A ++C+ + H GC L ID+ GS++ ++
Sbjct: 363 LNGNHVIQKCLNKLDATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGSKKIWLIE 422
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA +L + GNYVVQ+++ L +P + + G LS K S VV+KCL+
Sbjct: 423 RITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVRQFLGRIPQLSKHKFSSNVVEKCLR 482
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
N+ I+ E+++ ++I Q+ D YGNYV+QTAL + +LV ++ HL
Sbjct: 483 CASPNSKDMIVSEIMSQNEIKQLMQDSYGNYVVQTALDYAT----PGMKHQLVEAIRPHL 538
Query: 312 AALRVMKYGSNV 323
A+R YG +
Sbjct: 539 PAVRATPYGRRI 550
>gi|356512063|ref|XP_003524740.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 451
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 160/313 (51%), Gaps = 7/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ G + +F + ELM +G ++ K ++ CNE
Sbjct: 137 IYLMAKDQHGCRFLQKMFDEGTPEDVLMIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEE 196
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L IT + + S++ G+ V+KL++ + + V SAL+ F L+
Sbjct: 197 QRMQILLIITEEPGQLVRISLNTHGTRVVQKLVETLKTRQQISLAV-SALEPGFLALIKD 255
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL N N FI+ AA ++C+ +A H+ GC L I + G R++++
Sbjct: 256 LNGNHVVQRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSSGEYREKLIA 315
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I NA L++ + GNYVVQ +L L+ + I G+YV LS K GS VV+KCL
Sbjct: 316 EICANALLLAQDQFGNYVVQFILDLKISSVTTCIRLQFEGNYVHLSRQKFGSHVVEKCLA 375
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
N + +I ELL++ + D + NYV+Q+AL R +H LV ++ H
Sbjct: 376 AFNDENRSRVILELLSTPHFEHLLQDPHANYVVQSAL----RHSEGHLHNLLVEAIESHK 431
Query: 312 AALRVMKYGSNVY 324
A R Y ++
Sbjct: 432 AVSRNSPYSKKIF 444
>gi|406863177|gb|EKD16225.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1055
Score = 139 bits (350), Expect = 2e-30, Method: Composition-based stats.
Identities = 84/313 (26%), Positives = 162/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++++L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 632 EIYALCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCND 691
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ ++I + + ++++ G+ +++K+I+ ++ P + ++ AL+ L+
Sbjct: 692 DERTVLIENASHD---LVRIALNQHGTRALQKMIEFIS-TPGQIQTIIEALRHRVVELIQ 747
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL + FI+ A HC+ + H GC L ID+ G ++ ++
Sbjct: 748 DLNGNHVIQKCLNKLSSTDAQFIFDAVGTHCVDVGTHRHGCCVLQRCIDHASGEQKAWLI 807
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
IS NA L + GNYVVQ++L L +P + + +G LS K S V++KCL
Sbjct: 808 RQISNNAYVLVQDPFGNYVVQYILDLNEPTFTEPLVAMFQGRVGQLSKQKFSSNVIEKCL 867
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +IEE+L ++ ++ D + NYVIQTAL ++ RL+ ++ +
Sbjct: 868 RCAQEPSKDMLIEEMLQPAELDRLLRDSFANYVIQTALDYA----NPNMKARLIEAIRPY 923
Query: 311 LAALRVMKYGSNV 323
L A+R YG +
Sbjct: 924 LPAIRTTPYGRRI 936
>gi|328866633|gb|EGG15016.1| hypothetical protein DFA_09838 [Dictyostelium fasciculatum]
Length = 1352
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 164/316 (51%), Gaps = 16/316 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G ++LQ+ L GD + + +F V + ELM+ +G ++ K +E CN+
Sbjct: 1035 IYPLCRDQHGCRFLQKKLEEGDEPLTELIFKEVCEYMLELMTDPFGNYLCQKLLEHCNDR 1094
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +II K+ + S++ G+ +V+K+I+ + P + + +L + L+
Sbjct: 1095 QRLVIIDKVGPD---IVRISMNMHGTRAVQKMIEFLT-TPEQIALIKKSLAQHVVPLIQD 1150
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQA--ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL N FIY + + +C+ +A H GC L ID+ +++ Q+
Sbjct: 1151 LNGNHVIQKCLNKLAPPDNQFIYDSVSSSANCIAVATHRHGCCVLQRCIDHASETQKVQL 1210
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + N+ L + GNYVVQ+VL L P L + GH L+ K S VV+KC
Sbjct: 1211 IQEVIANSLVLVQDPFGNYVVQYVLDLPFPGLTCEMAKRFVGHVSILATQKFSSNVVEKC 1270
Query: 252 LKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLVTKL 307
L + + +I+EL++ D +L + D + NYVIQT+L AE + H +LV +
Sbjct: 1271 LHVADPITRGNLIQELIDCDTLLHLLQDPFANYVIQTSLTIAEPHQ------HTKLVEAI 1324
Query: 308 QQHLAALRVMKYGSNV 323
+ HLA L+ YG +
Sbjct: 1325 KPHLAQLKNTPYGKRI 1340
>gi|242071465|ref|XP_002451009.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
gi|241936852|gb|EES09997.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
Length = 734
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 6/312 (1%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
L++DQ+ ++LQ+ L+ G +DK+F + ELM ++ K +E C Q
Sbjct: 416 LSKDQDACRFLQKVLTEGTQEDIDKIFSEIIENVGELMVDPTAHYLVQKILEVCTNDQRT 475
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+I +IT AS + G+ V+K+I+ + + + V+S L LM G
Sbjct: 476 YLIREITKAPISLHKASCNMHGTRVVQKVIETM-NTSDQVSMVVSTLNTGIMRLMTDSYG 534
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V L CLE F+ + A L LA GC L I+N +R +L I+
Sbjct: 535 NHVALHCLEKLLPEHKAFLLETATSRYLQLARDRHGCCVLQKCIENSSDEQRNNLLCKIT 594
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
+A LS + GNYV+Q +L+L + I L GH+ +LS+ KCGS VV+ CLK
Sbjct: 595 SSALVLSEDQYGNYVIQFILTLNIEWATTRIVDELAGHFGNLSMQKCGSHVVEHCLKLPR 654
Query: 257 AV-HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALR 315
+ II EL++ ++L + D+YGN+VIQTAL +Q + H V ++ H A L+
Sbjct: 655 PICDRIINELMHDPKLLHIILDQYGNFVIQTAL----KQCQGEQHAAFVETIRPHTAVLQ 710
Query: 316 VMKYGSNVYKWT 327
YG V T
Sbjct: 711 SNMYGKRVLSRT 722
>gi|443895829|dbj|GAC73174.1| translational repressor MPT5/PUF4 and related RNA-binding proteins
[Pseudozyma antarctica T-34]
Length = 671
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 159/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+F+L +DQ G ++LQ+ L + D +F ELM+ +G ++ K +E C +
Sbjct: 233 DIFALCKDQHGCRFLQKKLEESNGAHRDMIFSETFSHFAELMTDPFGNYLCQKMLEYCTD 292
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q LI+ + + + S++ G+ +V+K+I ++ P ++ ++ AL L+
Sbjct: 293 EQRNLIVELVAPE---LVTISLNMHGTRAVQKMIDFLS-TPRQIHSIIVALSMNVVTLIK 348
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ V+ +CL N FIY A HC+ +A H GC L ID+ S+R Q++
Sbjct: 349 DLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASESQRVQLV 408
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ+VL L DA+ G+ LS+ K S V++KC+
Sbjct: 409 AEITYNALTLVQDPFGNYVVQYVLDLSIARFTDAVVRQFVGNVCLLSVQKFSSNVMEKCI 468
Query: 253 KYQNA--VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ +IEELLN ++ ++ D Y NYV+QT+L R+ RLV ++
Sbjct: 469 RVSEPGVRKQLIEELLNRARLEKLLRDSYANYVVQTSLDYADPVQRM----RLVECIRPI 524
Query: 311 LAALRVMKYGSNV 323
L +R YG +
Sbjct: 525 LPVIRNTPYGKRI 537
>gi|159130481|gb|EDP55594.1| RNA-binding protein, putative [Aspergillus fumigatus A1163]
Length = 1062
Score = 138 bits (347), Expect = 4e-30, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 164/320 (51%), Gaps = 10/320 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L++L +DQ G +YLQ L + + +F + ELM+ +G ++ K +E N+
Sbjct: 649 ELYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQKLLEFSND 708
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I +QL +A +++ G+ +++K+I+ ++ P + V+ AL+ L+
Sbjct: 709 EQRTALINNAA--NQLVKIA-LNQHGTRALQKMIEFIS-TPEQIQTVIQALRDHVVELVQ 764
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G +R +++
Sbjct: 765 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLI 824
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C A RG+ LS K S V++KCL
Sbjct: 825 AQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCL 884
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ +I+E+L ++ ++ D + NYV+QTA+ + R R+V ++
Sbjct: 885 RTAEFQMRRQMIDEMLAGTELEKMLRDSFANYVVQTAMDFADPETR----ARIVDAIRPI 940
Query: 311 LAALRVMKYGSNVYKWTTAS 330
L ++R +G + AS
Sbjct: 941 LPSIRQTPHGRRIAGKMMAS 960
>gi|70990304|ref|XP_750001.1| RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847633|gb|EAL87963.1| RNA-binding protein, putative [Aspergillus fumigatus Af293]
Length = 1062
Score = 138 bits (347), Expect = 4e-30, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 164/320 (51%), Gaps = 10/320 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L++L +DQ G +YLQ L + + +F + ELM+ +G ++ K +E N+
Sbjct: 649 ELYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQKLLEFSND 708
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I +QL +A +++ G+ +++K+I+ ++ P + V+ AL+ L+
Sbjct: 709 EQRTALINNAA--NQLVKIA-LNQHGTRALQKMIEFIS-TPEQIQTVIQALRDHVVELVQ 764
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G +R +++
Sbjct: 765 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLI 824
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C A RG+ LS K S V++KCL
Sbjct: 825 AQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCL 884
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ +I+E+L ++ ++ D + NYV+QTA+ + R R+V ++
Sbjct: 885 RTAEFQMRRQMIDEMLAGTELEKMLRDSFANYVVQTAMDFADPETR----ARIVDAIRPI 940
Query: 311 LAALRVMKYGSNVYKWTTAS 330
L ++R +G + AS
Sbjct: 941 LPSIRQTPHGRRIAGKMMAS 960
>gi|384252508|gb|EIE25984.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 380
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 160/315 (50%), Gaps = 11/315 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ ++A+DQ G ++LQ G + + V ELM +G ++ K ++ C+E
Sbjct: 64 VMAVAKDQNGCRFLQRKFDEGGPAAIQAVLPEVLEHLIELMMDPFGNYLIQKLLDRCSED 123
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q L +LK + + + +++ G+ +V+KLI+ + + V AL+ L+
Sbjct: 124 Q-RLAVLKKAAERKELVQVALNTHGTRAVQKLIETLTSREQVAL-VTDALRGGVVSLIRD 181
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ + F+Y AA H + +A H GC L ID ++++++
Sbjct: 182 LNGNHVIQRCLQRLGPEDSQFVYDAAAAHTMDIATHRHGCCVLQRCIDFATPPQKRRLVD 241
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A LS+ GNYVVQ+VL L ++I L GHY +L+ K S VV+KCLK
Sbjct: 242 QITSHALPLSQDPFGNYVVQYVLELGHSEATESIMRQLCGHYPELAQQKFSSNVVEKCLK 301
Query: 254 YQNAV-----HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
+I ELLNS + ++ D Y NYV+Q+AL+ + Q +H LV ++
Sbjct: 302 LGGQSLAEMRERVIRELLNSPLMPRLLQDPYANYVLQSALSVSSAQ----LHNDLVDAMR 357
Query: 309 QHLAALRVMKYGSNV 323
+L +LR +G +
Sbjct: 358 PYLPSLRGTPHGKRI 372
>gi|119497273|ref|XP_001265396.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119413558|gb|EAW23499.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 1056
Score = 137 bits (346), Expect = 5e-30, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 162/320 (50%), Gaps = 10/320 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L++L +DQ G +YLQ L + + +F + ELM+ +G ++ K +E N+
Sbjct: 643 ELYTLCKDQHGCRYLQRKLEERNPEHVQFIFDETNMHVVELMTDPFGNYLCQKLLEYSND 702
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P + V+ AL+ L+
Sbjct: 703 EQRTALINNAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQIQTVIQALRDHVVELVQ 758
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G +R +++
Sbjct: 759 DLNGNHVIQKCLNRLSAEDAQFIYDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLI 818
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C A RG+ LS K S V++KCL
Sbjct: 819 AQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCL 878
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ +I+E+L ++ ++ D + NYV+QTA+ + R R+V ++
Sbjct: 879 RTAEFQMRRQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADPETR----ARIVDAIRPI 934
Query: 311 LAALRVMKYGSNVYKWTTAS 330
L ++R +G + AS
Sbjct: 935 LPSIRQTPHGRRIAGKMMAS 954
>gi|145354443|ref|XP_001421494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581731|gb|ABO99787.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 326
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 167/321 (52%), Gaps = 17/321 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL- 75
LA+DQ G ++LQ ++ +D + + ELM +G ++ K IE C++ Q
Sbjct: 6 LARDQHGCRFLQRKFDEEGAKAVDLCYDEIIAEAVELMMDPFGNYLVQKLIECCSDEQRS 65
Query: 76 ----ALIILKITFQDQLFLLASV--DKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
A+ ++K D L L ++ + G+ +V+KLI+++ + P + +AL+
Sbjct: 66 GVLRAVSVVKDDSLDGLPELVTIALNTHGTRAVQKLIEML-NSPEEVSLATNALRPGVVT 124
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
L+ G+ VI +CL+ + N FIY AA HC+ +A H GC L ID+ +R+
Sbjct: 125 LIKDLNGNHVIQRCLQRLSSEDNQFIYDAAKVHCVEIATHRHGCCVLQRCIDHAIDEQRR 184
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I+ A LS+ GNYVVQ++L L + + L G+Y +LS+ K S VV+
Sbjct: 185 PLVLEIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQLLGNYAELSMQKFSSNVVE 244
Query: 250 KCLKYQNAV-----HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
KCLK +A + ++ E++ S + ++ D YGNYV+Q+ L T + +H LV
Sbjct: 245 KCLKLADASLEKNRNTVVREIMQSPLLDRLLMDPYGNYVVQSTLTVT----KGVLHTELV 300
Query: 305 TKLQQHLAALRVMKYGSNVYK 325
+++ HL ++ +G + +
Sbjct: 301 ERIRPHLPLIKNSPFGKRILR 321
>gi|297845242|ref|XP_002890502.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
gi|297336344|gb|EFH66761.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 163/312 (52%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G + +F V ELM +G ++ K ++ CNE
Sbjct: 213 VYLMAKDQHGCRFLQRIFEDGSALDAMVIFNEVIPHVVELMMDPFGNYLMQKLLDVCNEE 272
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q IIL +T + + S++ +G+ V++L++ + + V AL+ F L+
Sbjct: 273 QRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISL-VKLALRPGFLNLIRD 331
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N+FI++ A + C+ +A H GC L I G +R++++
Sbjct: 332 LNGNHVIQRCLKCLSTKDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVT 391
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N+ L++ GNY VQ VL L D I A+ L+GHYV+LS+ K S +V++CL
Sbjct: 392 EISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLT 451
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + I+ EL++ + D Y N+VIQ ALA T + S+H LV ++ H +
Sbjct: 452 HCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVT----KGSLHATLVEVIRPH-S 506
Query: 313 ALRVMKYGSNVY 324
LR Y ++
Sbjct: 507 ILRNNPYCKRIF 518
>gi|295658885|ref|XP_002790002.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282085|gb|EEH37651.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1154
Score = 137 bits (344), Expect = 9e-30, Method: Composition-based stats.
Identities = 88/313 (28%), Positives = 159/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+S+ +DQ G +YLQ+ L + + +F ELM+ +G ++ K +E N+
Sbjct: 610 ELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSND 669
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 670 EQRTALINNAAPQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRGRVVELVQ 725
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R +++
Sbjct: 726 DLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLI 785
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P I+ IC + RG+ LS K S V++KC+
Sbjct: 786 EQITKNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCI 845
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +IEE+L ++ ++ D + NYV+QTA+ R +L+ ++
Sbjct: 846 RTADNQCRAALIEEMLVPSELEKMLRDSFANYVVQTAMDFADPDSR----NKLIDAIRPI 901
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 902 LPAIRQTPHGRRI 914
>gi|212537853|ref|XP_002149082.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210068824|gb|EEA22915.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 1026
Score = 137 bits (344), Expect = 9e-30, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 158/316 (50%), Gaps = 16/316 (5%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L ++ + +F ELM+ +G ++ K +E N+
Sbjct: 613 ELYGLCKDQHGCRYLQRKLEERNADHVQMIFEETHMHVVELMTDPFGNYLCQKLLEYSND 672
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ V+ P + V+ AL+ L+
Sbjct: 673 DQRTRLIHNAAPQ---LVPIALNQHGTRALQKMIEFVS-TPQQIRMVIDALRGHVVDLVQ 728
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A HC+ + H GC L ID+ G +R +++
Sbjct: 729 DLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLI 788
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA SL + GNYVVQ++L L +P D +C + G+ LS K S V++KCL
Sbjct: 789 AQITSNAFSLVQDPFGNYVVQYILDLSEPHFTDPLCQSFLGNIPALSKQKFSSNVIEKCL 848
Query: 253 KYQNAVHY-----IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+ Y +I+E+L ++ + D Y NYV+QTA+ +R R++ +
Sbjct: 849 R---TAEYPMRCRMIDEILVPRELDAMLRDSYANYVVQTAMDFADADNR----NRIIEAV 901
Query: 308 QQHLAALRVMKYGSNV 323
+ L ++R +G +
Sbjct: 902 RPILPSIRQTPHGRRI 917
>gi|115486015|ref|NP_001068151.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|77551702|gb|ABA94499.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645373|dbj|BAF28514.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|125577613|gb|EAZ18835.1| hypothetical protein OsJ_34373 [Oryza sativa Japonica Group]
gi|215717155|dbj|BAG95518.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 746
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 157/316 (49%), Gaps = 7/316 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ LA+DQ G ++LQ+ + G +K+ + ELM +G ++ K +E C++
Sbjct: 424 IYMLAKDQNGCRFLQKVFTEGTKEDFEKILAEIIDHFGELMIDPFGNYLVQKLLEECSDD 483
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q II +IT + + + G+ +V+K+I + + P + V+SAL LM
Sbjct: 484 QRTRIICEITRVPGELITVACNMHGTRTVQKVIDTI-NTPEQISKVVSALSPGAMRLMTD 542
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
GS V +CL+ F+ A L LA + GC + I++ ++ +L
Sbjct: 543 TNGSHVAQRCLKKLLPEYKAFLLDVAALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNLLC 602
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A SLS + GNYV+Q V++L + I L+GH+ LS+ KCGS VV+ CLK
Sbjct: 603 KITSSALSLSEDQYGNYVIQFVVNLGIEWATSKIVKELKGHFGYLSMQKCGSHVVENCLK 662
Query: 254 YQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ + II EL+ ++ + D +GN+VIQTAL E + +H V ++ H
Sbjct: 663 QASELDREMIIHELMADSKLPHIMADPFGNFVIQTALKEC----KGELHSSFVEAIRPHA 718
Query: 312 AALRVMKYGSNVYKWT 327
AL+ Y V T
Sbjct: 719 PALQNDVYAKRVLSKT 734
>gi|390603815|gb|EIN13206.1| ARM repeat-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1019
Score = 137 bits (344), Expect = 1e-29, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 14/311 (4%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
L +DQ G +YLQ+ L G D +F G +LM+ +G ++ K +E + Q
Sbjct: 574 LCKDQHGCRYLQKKLEEGIPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYATDEQRN 633
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
LI + Q + S++ G+ +V+K+I ++ + + ++ AL L+ G
Sbjct: 634 LICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQI-HSIIVALSLHVVVLIKDLNG 689
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI +CL N FIY A +C+ +A H GC L ID+ +R Q+++ I+
Sbjct: 690 NHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDQQRVQLVNEIT 749
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-- 254
NA +L + GNYVVQ++L L D D + G+ LS+ K S V++KC++
Sbjct: 750 YNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFTGNVCALSVQKFSSNVIEKCIRVAE 809
Query: 255 QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTKLQQHLA 312
+ +IEELLN ++ ++ D YGNY +QTAL D QR LV ++ L
Sbjct: 810 HSTRKLLIEELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPGQRALLVEGIRPVLP 863
Query: 313 ALRVMKYGSNV 323
+R YG +
Sbjct: 864 LIRNTPYGKRI 874
>gi|297809067|ref|XP_002872417.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318254|gb|EFH48676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 540
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 153/278 (55%), Gaps = 8/278 (2%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKL--FWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
+A+DQ G ++LQ+ + G+ R +D + F V EL +G + K +E CNE Q
Sbjct: 265 MAKDQLGCRFLQKFV--GEGRFVDVMIVFKEVINHIAELGIDPFGNYFIQKLLEVCNEEQ 322
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK 134
I++++T + L + S++ +G+ V+KLI+ V + V SAL F L+
Sbjct: 323 RTQILIRLTSKPGLLIKISINNYGTRVVQKLIETVT-TKEQISLVKSALVPGFLSLVREL 381
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 194
G+ VIL CL+ + N FI +AA++ C +A H GC L + G + ++++
Sbjct: 382 NGNHVILNCLKFFGPNDNKFILEAAIKFCTEIATHRHGCCVLQRCVSYSVGEQHEKLVGE 441
Query: 195 ISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK- 253
IS N+ L++ GNYVVQ++ +E + F LRG+YV L+ K GS VV+KC++
Sbjct: 442 ISRNSLLLAQDPYGNYVVQYI--IEKKVGGVNVMFELRGNYVKLATQKFGSHVVEKCIRF 499
Query: 254 YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAET 291
Y + I+ EL++ Q+ D Y NYVIQ+AL++T
Sbjct: 500 YPESRSQIVHELVSVPNFEQLVQDPYANYVIQSALSKT 537
>gi|347835278|emb|CCD49850.1| similar to RNA-binding protein [Botryotinia fuckeliana]
Length = 794
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 160/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++++L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 376 EIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCND 435
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ ++I + + ++++ G+ +++K+I+ ++ + ++ AL+ L+
Sbjct: 436 EERTVLIENASHD---LVRIALNQHGTRALQKMIEFISTAG-QVQTIIGALRYRVVELIQ 491
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FI+ A +HC+ + H GC L ID+ G ++ ++
Sbjct: 492 DLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQKAWLI 551
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
IS NA L + GNYVVQ++L L +P + + G LS K S V++KCL
Sbjct: 552 RQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQKFSSNVIEKCL 611
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +IEE+L Q+ + D + NYVIQTAL L++ RL+ ++ H
Sbjct: 612 RCAQEPSKDMLIEEMLQPTQLDGLLRDSFANYVIQTALDYA----NLNMKTRLIEAIRPH 667
Query: 311 LAALRVMKYGSNV 323
L A+R YG +
Sbjct: 668 LPAIRTTPYGRRI 680
>gi|67516077|ref|XP_657924.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
gi|40746570|gb|EAA65726.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
Length = 1515
Score = 136 bits (342), Expect = 2e-29, Method: Composition-based stats.
Identities = 88/314 (28%), Positives = 157/314 (50%), Gaps = 10/314 (3%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++++ L +DQ G +YLQ L + L +F ELM+ +G ++ K +E N
Sbjct: 591 NEIYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSN 650
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ Q +++ K Q + ++++ G+ +++K+I+ ++ V+ ALK L+
Sbjct: 651 DEQRTVLVNKAAPQ---LVKIALNQHGTRALQKMIEFIS-TEEQTQTVIDALKDHVVELV 706
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL K+ FIY A C+ + H GC L ID+ G++R ++
Sbjct: 707 QDLNGNHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARL 766
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ I+ NA +L + GNYVVQ++L L + + +C LS K S V++KC
Sbjct: 767 IEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHKFSSNVIEKC 826
Query: 252 LKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
L+ + +IEE+L D++ ++ D Y NYV+QTA M + R+V ++
Sbjct: 827 LRTADEEMRRQMIEEMLAGDELEKMLRDSYANYVVQTA----MDYADPATRARIVKYIEP 882
Query: 310 HLAALRVMKYGSNV 323
L +LR +G +
Sbjct: 883 ILPSLRGTPHGRRI 896
>gi|303282033|ref|XP_003060308.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457779|gb|EEH55077.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 333
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
LA+DQ G ++LQ ++K + + +LM +G ++ K +E CN+ Q
Sbjct: 18 LARDQHGCRFLQRKFDDEGEDAVNKCYDEIIAEVVDLMMDPFGNYLVQKLLECCNDEQRT 77
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
I+ +L +A ++ G+ +V+KL++ + P + ALK L+ G
Sbjct: 78 GILKAGDGVPELVSVA-LNTHGTRAVQKLVETL-RTPEHIRLATEALKPGVVTLIKDLNG 135
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI +CL+ N F+Y AA + +A H GC L +D+ S+R+ +++ I+
Sbjct: 136 NHVIQRCLQRLEAEDNQFVYDAAKACSVEIATHRHGCCVLQRCVDHAADSQRRALVNEIA 195
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--- 253
A LS+ GNYVVQ++L L P+ + L G Y +LS+ K S VV+KCLK
Sbjct: 196 AQALVLSQDPFGNYVVQYILDLGLPWANAEVMVRLGGAYAELSMQKFSSNVVEKCLKLAG 255
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ + ++ E+++S + ++ D YGNYV+Q+ L T + S+H LV +++ HL
Sbjct: 256 QELEEHRNVVVREIMSSPLLDRLLMDPYGNYVVQSTLTVT----KGSLHAELVERIRPHL 311
Query: 312 AALRVMKYGSNVYK 325
++ +G + +
Sbjct: 312 PLIKNSPFGKRILR 325
>gi|261194503|ref|XP_002623656.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588194|gb|EEQ70837.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 1119
Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 161/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ + +DQ G +YLQ+ L + + +F ELM+ +G ++ K +E N+
Sbjct: 691 ELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSND 750
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V++AL+ L+
Sbjct: 751 EQRTALINNAAPQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQ 806
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R +++
Sbjct: 807 DLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDHASGEQRARLI 866
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P I+ IC + RG+ LS K S V++KC+
Sbjct: 867 EQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCI 926
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + ++EE+L ++ ++ D + NYV+QTA+ + R +L+ ++
Sbjct: 927 RTADPQSRSSLVEEMLVPSELEKMLRDSFANYVVQTAMDFADPEYR----TKLIEAIRPI 982
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 983 LPAIRQTPHGRRI 995
>gi|242808102|ref|XP_002485093.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715718|gb|EED15140.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1029
Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats.
Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 586 ELYGLCKDQHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSND 645
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ V+ P + V+ AL+ L+
Sbjct: 646 DQRTRLIHNAAPQ---LVPIALNQHGTRALQKMIEFVS-TPQQIQMVIDALRGHVVDLVQ 701
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A HC+ + H GC L ID+ G +R +++
Sbjct: 702 DLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLI 761
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA SL + GNYVVQ++L L +P + +C + G+ LS K S V++KCL
Sbjct: 762 AQITSNAFSLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNVIEKCL 821
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ +I+E+L ++ + D Y NYV+QTA+ +R R++ ++
Sbjct: 822 RTAEYPMRRRMIDEILVPRELDAMLRDSYANYVVQTAMDFADADNR----NRIIEAVRPI 877
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 878 LPSIRQTPHGRRI 890
>gi|327357037|gb|EGE85894.1| RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 1043
Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 161/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ + +DQ G +YLQ+ L + + +F ELM+ +G ++ K +E N+
Sbjct: 615 ELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSND 674
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V++AL+ L+
Sbjct: 675 EQRTALINNAAPQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQ 730
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R +++
Sbjct: 731 DLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDHASGEQRARLI 790
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P I+ IC + RG+ LS K S V++KC+
Sbjct: 791 EQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCI 850
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + ++EE+L ++ ++ D + NYV+QTA+ + R +L+ ++
Sbjct: 851 RTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQTAMDFADPEYR----TKLIEAIRPI 906
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 907 LPAIRQTPHGRRI 919
>gi|449493600|ref|XP_004159369.1| PREDICTED: uncharacterized LOC101212397 [Cucumis sativus]
Length = 746
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 160/319 (50%), Gaps = 14/319 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ S G ++ +F + ELM +G ++ K + C+E
Sbjct: 425 IYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLIQKLLGVCDED 484
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ KI +L + S + G+ +V+KLI+ + P ++S LK LM
Sbjct: 485 QRLQILYKINRPGELIRI-SCNMHGTRAVQKLIETLK-TPEQFSLIVSLLKTGIVILMKN 542
Query: 134 KPGSSVILQCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G+ V CL+ P Y K F++ AA + C+ +A GC L + R +
Sbjct: 543 VNGNHVAQHCLQYLMPDYIGK--FLFDAATKSCVEVATDRHGCCVLQKCLAVSDARHRDR 600
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLED-----PFLIDAICFALRGHYVDLSLTKCGS 245
+L + NA LS+ + GNYVVQ L L P++ I L GH+ DLS+ K S
Sbjct: 601 LLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLEGHFSDLSIQKYSS 660
Query: 246 FVVQKCLKYQNA-VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
VV++C+ + + +++EL+N ++ Q+ + YGNY +Q LA + + SVH +LV
Sbjct: 661 NVVERCVYAGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLARSGIC-KSSVHAKLV 719
Query: 305 TKLQQHLAALRVMKYGSNV 323
++ H+ LR YG V
Sbjct: 720 AAIRPHVPLLRTNMYGKKV 738
>gi|449452777|ref|XP_004144135.1| PREDICTED: uncharacterized protein LOC101212397 [Cucumis sativus]
Length = 746
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 160/319 (50%), Gaps = 14/319 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ S G ++ +F + ELM +G ++ K + C+E
Sbjct: 425 IYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLIQKLLGVCDED 484
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ KI +L + S + G+ +V+KLI+ + P ++S LK LM
Sbjct: 485 QRLQILYKINRPGELIRI-SCNMHGTRAVQKLIETLK-TPEQFSLIVSLLKTGIVILMKN 542
Query: 134 KPGSSVILQCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G+ V CL+ P Y K F++ AA + C+ +A GC L + R +
Sbjct: 543 VNGNHVAQHCLQYLMPDYIGK--FLFDAATKSCVEVATDRHGCCVLQKCLAVSDARHRDR 600
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLED-----PFLIDAICFALRGHYVDLSLTKCGS 245
+L + NA LS+ + GNYVVQ L L P++ I L GH+ DLS+ K S
Sbjct: 601 LLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLEGHFSDLSIQKYSS 660
Query: 246 FVVQKCLKYQNA-VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
VV++C+ + + +++EL+N ++ Q+ + YGNY +Q LA + + SVH +LV
Sbjct: 661 NVVERCVYAGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLARSGIC-KSSVHAKLV 719
Query: 305 TKLQQHLAALRVMKYGSNV 323
++ H+ LR YG V
Sbjct: 720 AAIRPHVPLLRTNMYGKKV 738
>gi|359492558|ref|XP_003634432.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Vitis
vinifera]
Length = 574
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 161/317 (50%), Gaps = 10/317 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDS-RILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+ LA +Q G ++LQE L + + + ++ +F V +LM Q+G +V K +E CNE
Sbjct: 253 VVPLAMNQHGCRFLQEKLQNNVTVKEIEMIFSEVIHHVAQLMLDQFGNYVVQKLVEICNE 312
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q I+L T + ++ G+ ++KL++ + P + MSAL + L
Sbjct: 313 EQRTQILLSATTNQYQLIFICLNMHGTRVMQKLLEYLT-TPEQISIAMSALWPVTVALTK 371
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G VI CL+ N ++ + E+C +A + GC L + ++N +G R+Q++
Sbjct: 372 DTSGHHVIQHCLKLFSCQDNMYLIKEVAENCFEIATNRSGCCVLQSCVENSQGELREQLM 431
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I NA L+ R GNYVVQH++ L+ P +I + G ++ LS K GS VV+K L
Sbjct: 432 AEIIANALPLAEDRYGNYVVQHLMGLKIPEVITNLLKQFEGTFISLSCNKYGSNVVEKFL 491
Query: 253 ---KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
K + + II ELL S + + D +GN+VIQ+AL+ + + + LV ++
Sbjct: 492 IESKDEQSSQIII-ELLRSPNVSMLLLDPFGNFVIQSALSVS----KGHIRNALVNLVRL 546
Query: 310 HLAALRVMKYGSNVYKW 326
H ++R YG V W
Sbjct: 547 HAPSMRSNLYGKKVLTW 563
>gi|239613522|gb|EEQ90509.1| RNA-binding protein [Ajellomyces dermatitidis ER-3]
Length = 1122
Score = 135 bits (340), Expect = 3e-29, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 161/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ + +DQ G +YLQ+ L + + +F ELM+ +G ++ K +E N+
Sbjct: 694 ELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSND 753
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V++AL+ L+
Sbjct: 754 EQRTALINNAAPQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQ 809
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R +++
Sbjct: 810 DLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDHASGEQRARLI 869
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P I+ IC + RG+ LS K S V++KC+
Sbjct: 870 EQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCI 929
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + ++EE+L ++ ++ D + NYV+QTA+ + R +L+ ++
Sbjct: 930 RTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQTAMDFADPEYR----TKLIEAIRPI 985
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 986 LPAIRQTPHGRRI 998
>gi|330805438|ref|XP_003290689.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
gi|325079152|gb|EGC32766.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
Length = 926
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 162/316 (51%), Gaps = 16/316 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G ++LQ+ L D ++ + +F V + ELM+ +G ++ K +E CN+
Sbjct: 606 IYPLCRDQHGCRFLQKKLEESDPQLTEIIFKEVCDYMLELMTDPFGNYLCQKLLEHCNDQ 665
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q II K+ + S++ G+ +V+K+I+ + P + + +LK L+
Sbjct: 666 QRLTIIEKVGTD---IVRISMNMHGTRAVQKMIEYLT-TPEQIELIKRSLKDSVVQLIQD 721
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALE--HCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL N FIY + +C+ +A H GC L ID+ S++ Q+
Sbjct: 722 LNGNHVIQKCLNKLSPQDNQFIYDSVSSDGNCVAVATHRHGCCVLQRCIDHASESQKLQL 781
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALR--GHYVDLSLTKCGSFVVQ 249
+ + N+ L + GNYVVQ+VL L PF A A R GH L+ K S VV+
Sbjct: 782 IQEVIANSLVLVQDPYGNYVVQYVLDL--PFQGLATEMAKRFVGHVPILATQKFSSNVVE 839
Query: 250 KCLKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
KCL +A +I+E+++ D +L + D Y NYVIQT+L+ + H +LV +
Sbjct: 840 KCLHVADATTRGNLIQEVIDYDNLLYLLQDPYANYVIQTSLSISEPHQ----HTKLVEAI 895
Query: 308 QQHLAALRVMKYGSNV 323
+ HL L+ YG +
Sbjct: 896 RPHLPLLKNTPYGKRI 911
>gi|115488632|ref|NP_001066803.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|77555831|gb|ABA98627.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649310|dbj|BAF29822.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|125579396|gb|EAZ20542.1| hypothetical protein OsJ_36154 [Oryza sativa Japonica Group]
Length = 520
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ L G R +D +F V+ ELM +G ++ K + C++
Sbjct: 207 MYHIARDQHGCRFLQQRLDDG-KREVDFIFAGVARHAVELMVNPFGNYLMQKLLAVCDDE 265
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L +T + + S++ G+ +V+KLI+ + + V+ AL+ F L+
Sbjct: 266 QRMAIVLTLTKDPFVLVRISLNVHGTRAVQKLIESLRTREEIQL-VVQALRPGFLELIKD 324
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ + N I++AA HCL + GC L I G +R++++
Sbjct: 325 PNGNHVVQRCLQSFDANDNKPIFEAAAVHCLDIGMQCHGCCVLQRCIARSGGEQREKLVA 384
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ N L++ GNYVVQ+V+ L+ P ++ +G Y+ LS+ K S VV+KCLK
Sbjct: 385 AIASNGFELAQDAYGNYVVQYVIDLKVPTANASLTKQFQGRYIHLSMQKFSSNVVEKCLK 444
Query: 254 Y--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ II ELL Q+ + NYVI +A+ + + S+H L ++ H+
Sbjct: 445 VFKEADKATIILELLAVPHFEQLLQHPFANYVIYSAIQNS----KGSLHSALTNAIRPHV 500
Query: 312 AALRVMKYGSNVY 324
LR Y +Y
Sbjct: 501 ELLRTSPYCKRIY 513
>gi|346323846|gb|EGX93444.1| RNA-binding protein, putative [Cordyceps militaris CM01]
Length = 1060
Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 164/312 (52%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + +++ + ELM+ +G ++ K +E CN+
Sbjct: 638 IYDLCKDQHGCRYLQKKLEERNPEQVHMIWFETNQHVIELMTDPFGNYLCQKLLEFCNDD 697
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + QD + + ++++ G+ +++K+I+ V + P ++ ++ AL+ L+
Sbjct: 698 ERTVLIQNAS-QDMVRI--ALNQHGTRALQKMIEYV-NTPQQVHLIIEALRFRVVELIQD 753
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL + FI+ A +C+ + H GC L ID+ G +++ ++
Sbjct: 754 LNGNHVIQKCLNKLTSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQKQWLVA 813
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + + +G LS K S V++KCL+
Sbjct: 814 RITAHARILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNVIEKCLR 873
Query: 254 YQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ I+EE+L + +I ++ D + NYVIQTAL Q + RLV ++ L
Sbjct: 874 CAQPPSRDMIVEEMLAAPEIERLLRDSFANYVIQTALEFATPQ----LKYRLVEAIRPVL 929
Query: 312 AALRVMKYGSNV 323
+R YG +
Sbjct: 930 PQIRTTPYGRRI 941
>gi|115396764|ref|XP_001214021.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193590|gb|EAU35290.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1019
Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats.
Identities = 87/320 (27%), Positives = 160/320 (50%), Gaps = 10/320 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L ++ + +F ELM+ +G ++ K +E N+
Sbjct: 608 ELYGLCKDQHGCRYLQRKLEERNAEHVQMIFEETHLHVVELMTDPFGNYLCQKLLEYSND 667
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ +L+ L+
Sbjct: 668 EQRTTLINNAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTTTVIQSLQDHVVELVQ 723
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G +R +++
Sbjct: 724 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLI 783
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C RG+ LS K S V++KCL
Sbjct: 784 AQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCL 843
Query: 253 KYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +I+E+L +++ ++ D + NYV+QTA+ R R+V ++
Sbjct: 844 RTADVQIRRQMIDEMLAGNELEKMLRDSFANYVVQTAMDFADADTR----TRIVECIRPI 899
Query: 311 LAALRVMKYGSNVYKWTTAS 330
L ++R +G + AS
Sbjct: 900 LPSIRQTPHGRRIAGKMMAS 919
>gi|356528052|ref|XP_003532619.1| PREDICTED: uncharacterized protein LOC100799294 [Glycine max]
Length = 779
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 7/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +++DQ G ++LQ+ G + +F + E M +G ++ K ++ CNE
Sbjct: 465 IYLMSKDQHGCRFLQKMFDEGTPEDVQVIFNEIIDHVVEPMVNPFGNYLMQKLLDVCNEE 524
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L IT + + S++ G+ V+KLI+ + + V SAL+ F L+
Sbjct: 525 QRMQILLIITEEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLAV-SALEPGFLALIKD 583
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL N N FI+ AA ++C+ +A H+ GC L I + G +++++
Sbjct: 584 LNGNHVVQRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSNGEYQEKLIA 643
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I NA L++ + GNYVVQ +L L+ P I G+Y LS K GS VV+KCL
Sbjct: 644 EICANALLLAQDQFGNYVVQFILDLKIPSATACIRLQFEGNYAHLSRQKFGSHVVEKCLA 703
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
N + +I ELL+ + D + NYV+Q+AL R +H LV ++ H
Sbjct: 704 VFNDENRSRVILELLSMPHFEHLLQDPHANYVVQSAL----RHSEGRLHNLLVEAIESHK 759
Query: 312 AALRVMKYGSNVY 324
A R Y ++
Sbjct: 760 AISRNSPYSKKIF 772
>gi|328853049|gb|EGG02190.1| hypothetical protein MELLADRAFT_24024 [Melampsora larici-populina
98AG31]
Length = 325
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 159/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+F L +DQ G ++LQ+ L G+ D +F + ELM+ +G ++ K +E +
Sbjct: 16 DMFGLCKDQHGCRFLQKKLEEGEPTHRDMIFAEIYPHFGELMTDAFGNYLSQKLLEYSTD 75
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q L+I I+ + + S++ G+ +V+K+I ++ + ++ AL L+
Sbjct: 76 EQRDLLIESISGE---LVSISLNMHGTRAVQKMIDFLS-TQRQVQSLIIALNLNVVTLIK 131
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL N FIY A +C+ +A H GC L ID+ S+R Q++
Sbjct: 132 DLNGNHVIQKCLNHLPPEDNQFIYNAVAANCIEVATHRHGCCVLQRCIDHASESQRIQLV 191
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ N+ SL + GNYVVQ+VL L D I+AI G+ LS+ K S VV+KC+
Sbjct: 192 TEITYNSLSLVQDPFGNYVVQYVLDLNDSRFIEAIVRQFLGNVCALSMQKFSSNVVEKCI 251
Query: 253 KYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + ++EEL ++ ++ D + NYV+QTAL + R +LV ++
Sbjct: 252 RVSDPAGRRALVEELSGRQRLERLLRDSFANYVVQTALDYSDPAQR----AQLVDNIRPI 307
Query: 311 LAALRVMKYGSNV 323
L +R YG +
Sbjct: 308 LPMIRNTPYGKRI 320
>gi|297839687|ref|XP_002887725.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
gi|297333566|gb|EFH63984.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
Length = 653
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 157/312 (50%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G S +F V ELM +G ++ K ++ C E
Sbjct: 341 VYLMAKDQHGCRFLQRIFDEGTSADAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 400
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L T + + S++ +G+ V++L++ + + V SAL+ F L+
Sbjct: 401 QRTQIVLVATAEPGQLIRISLNAYGTRVVQRLVETI-RTGKQISLVKSALRPGFLDLIKD 459
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N FI+ AA + C +A H GC L I +R++++
Sbjct: 460 LNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIA 519
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N+ L++ GNY VQ V+ L P + + L+GHYV LS+ K S +V++CL
Sbjct: 520 EISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLM 579
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + I+ EL++ Q+ D Y N+VIQ ALA T + +H LV ++ H +
Sbjct: 580 HCPESRPQIVRELISVPHFDQLLQDPYANFVIQAALAAT----KGPIHASLVEVIRPH-S 634
Query: 313 ALRVMKYGSNVY 324
LR Y ++
Sbjct: 635 ILRNNPYCKRIF 646
>gi|367054818|ref|XP_003657787.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
gi|347005053|gb|AEO71451.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
Length = 1029
Score = 134 bits (337), Expect = 6e-29, Method: Composition-based stats.
Identities = 88/315 (27%), Positives = 165/315 (52%), Gaps = 16/315 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDK--LFWV-VSGFTFELMSGQYGRFVFGKFIESC 70
++SL +DQ G +YLQ+ L ++RI ++ + W+ + ELM+ +G ++ K +E C
Sbjct: 612 IYSLCKDQHGCRYLQKQL---ENRIPEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYC 668
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+ + ++I + + ++++ G+ +++K+I+ V P + ++ AL+ L
Sbjct: 669 NDDERTVLIQNASSD---LVRIALNQHGTRALQKMIEHVT-TPVQINLIVEALRNQVVEL 724
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL FI+ A +HC+ + H GC L ID+ G+++
Sbjct: 725 IQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGAQKVW 784
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I+ +A +L + GNYVVQ+V+ L + + + + LS K S VV+K
Sbjct: 785 LIERITAHAVTLVQDPFGNYVVQYVIDLNEETFTEPLVQQFQNRIAALSKHKFSSNVVEK 844
Query: 251 CLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CL+ + + I+ ELL +I ++ D +GNYVIQTAL + + RLV ++
Sbjct: 845 CLRCASEQSRDMIVSELLAPGEIERLLRDSFGNYVIQTALDYSTPMSK----HRLVEAIR 900
Query: 309 QHLAALRVMKYGSNV 323
+L ++R YG +
Sbjct: 901 PNLPSIRATPYGRRI 915
>gi|154277036|ref|XP_001539363.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414436|gb|EDN09801.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1175
Score = 134 bits (337), Expect = 6e-29, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 161/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ + +DQ G +YLQ+ L + + +F ELM+ +G ++ K +E N+
Sbjct: 746 ELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSND 805
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V++AL+ L+
Sbjct: 806 EQRTALINNAAPQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQ 861
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R +++
Sbjct: 862 DLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLI 921
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P I+ IC + RG+ LS K S V++KC+
Sbjct: 922 EQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNISALSKQKFSSNVIEKCI 981
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +++E+L ++ ++ D + NYV+QTA+ + R +LV ++
Sbjct: 982 RTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAMDFADPEYR----TKLVEAIRPI 1037
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 1038 LPAIRQTPHGRRI 1050
>gi|361131374|gb|EHL03072.1| putative Pumilio domain-containing protein C6G9.14 [Glarea
lozoyensis 74030]
Length = 626
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 162/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++++L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 206 EIYNLCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCND 265
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ ++I + + ++++ G+ +++K+I+ ++ + ++ +LK L+
Sbjct: 266 EERTVLIENASHD---LVRIALNQHGTRALQKMIEFIS-TETQINIIIRSLKNRVVELIQ 321
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL ++ FI+ A HC+ + H GC L ID+ G ++ ++
Sbjct: 322 DLNGNHVIQKCLNRLTAQQSQFIFDAVGIHCIDVGTHRHGCCVLQRCIDHASGDQKSWLI 381
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
IS NA L + GNYVVQ++L L +P + + +G LS K S V++KCL
Sbjct: 382 RQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFQGRVGQLSKQKFSSNVIEKCL 441
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +IEE+L ++ ++ D + NYVIQTAL ++ RL+ ++ H
Sbjct: 442 RCAKEPSKDMLIEEMLQPTELDRLLRDSFANYVIQTALDYA----NPAMKTRLIEAIRPH 497
Query: 311 LAALRVMKYGSNV 323
L A+R YG +
Sbjct: 498 LPAIRTTPYGRRI 510
>gi|320162710|gb|EFW39609.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1111
Score = 133 bits (335), Expect = 1e-28, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 161/312 (51%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++SL +DQ G ++LQ + + ++ +F V ELM+ +G ++ K +E C E+
Sbjct: 779 IYSLCKDQIGCRFLQRKIEEQNESVIQIIFDEVFEHVGELMTDPFGNYLCQKLLEHCTEA 838
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ ++ + + S++ G+ +V+KL + + + V+SA + L+
Sbjct: 839 QRTAIVQRVAPE---LVSISLNMHGTRAVQKLTECLKERGQIEL-VISAFRDAVVTLIKD 894
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N FIY A +C+ +A H GC + IDN +++ Q+++
Sbjct: 895 LNGNHVIQRCLQRFSAADNQFIYDAVASNCVQVATHRHGCCVMQRCIDNATEAQKHQLVN 954
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
++ + +L + GNYVVQ+VL L P DA+ G+ L++ K S V++KCL+
Sbjct: 955 EVTFHVLNLVQDPFGNYVVQYVLDLNIPRFSDALVNQFLGNICPLAIQKFSSNVIEKCLR 1014
Query: 254 YQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
++ ELL+ + ++ D +GNYVIQTAL Q +L++ +V ++ H
Sbjct: 1015 ASEPATRTTMMLELLDERWLPRLLQDPFGNYVIQTALGIGDAQ-QLNI---MVEGIRPHF 1070
Query: 312 AALRVMKYGSNV 323
+R YG +
Sbjct: 1071 NLIRHTPYGKKI 1082
>gi|293333240|ref|NP_001169187.1| hypothetical protein [Zea mays]
gi|223975405|gb|ACN31890.1| unknown [Zea mays]
gi|413925374|gb|AFW65306.1| hypothetical protein ZEAMMB73_251972 [Zea mays]
Length = 754
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 7/309 (2%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
L++DQ+ ++LQ+ LS G +DK+F + +LM ++ K +E C Q
Sbjct: 435 LSKDQDACRFLQKLLSEGTQEDIDKIFGEIIDNVGDLMVDPTAHYLVQKILEECTNDQRT 494
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+I +IT AS + G+ V+K+I + + P + ++SAL LM G
Sbjct: 495 HMIREITKAPIKLHKASCNVHGTRVVQKVIDTM-NTPDQVSMLVSALNTGMMCLMTDSYG 553
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ CL+ FI +AA L LA GC L I + +R +L I+
Sbjct: 554 NHVVDHCLQKLLPEHKAFILEAAASCYLQLARDRHGCCVLQKCIGHSSDEQRNNLLCKIT 613
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
+A +LS GNYV+Q +L L ++ + L GH+ +LS+ KCGS VV+ CLK
Sbjct: 614 SSALTLSEDPYGNYVIQFILDLNIEWITVRVVDELAGHFGNLSMQKCGSHVVEHCLKLAP 673
Query: 257 AV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
+ II EL++ ++L + D+YGN+VIQTAL +Q + H V ++ H A +
Sbjct: 674 RLICDRIINELMHDPKLLDIILDQYGNFVIQTAL----KQCQGEHHAAFVETIKPHTAVM 729
Query: 315 RVMKYGSNV 323
+ YG V
Sbjct: 730 QSNMYGKKV 738
>gi|402218782|gb|EJT98857.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 514
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 160/324 (49%), Gaps = 22/324 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G +YLQ+ L G D +F G +LM+ +G ++ K +E N+
Sbjct: 39 EIPSLCKDQHGCRYLQKKLEEGIPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEFAND 98
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL-----------LYHVMS 121
Q LI + + S++ G+ +V+K+I ++ P ++ ++
Sbjct: 99 EQRNLICESVALD---LVGISLNMHGTRAVQKMIDYLST--PRQARVSCSSILQIHAIII 153
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
AL L+ G+ VI +CL N FIY A HC+ +A H GC L ID
Sbjct: 154 ALSMNVVTLIKDLNGNHVIQKCLNRLAPEDNQFIYNAVAAHCVEVATHRHGCCVLQRCID 213
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ ++R Q+++ I+ NA +L + GNYVVQ++L L D DA+ G+ + LS+
Sbjct: 214 HASEAQRMQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFVGNVIPLSMQ 273
Query: 242 KCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
K S V++KC++ + ++EE L+ ++ ++ D +GNY +QTAL RLS
Sbjct: 274 KFSSNVIEKCIRVAEPSTRKLLVEEFLSRAKLEKLLRDSFGNYCVQTALDYADPAQRLS- 332
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 333 ---LVEGIRPILPLIRNTPYGKRI 353
>gi|296422247|ref|XP_002840673.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636894|emb|CAZ84864.1| unnamed protein product [Tuber melanosporum]
Length = 971
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 164/316 (51%), Gaps = 13/316 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ L +DQ G +YLQ+ L + + + +F ELM+ +G ++ K +E N+
Sbjct: 598 NIYELCKDQHGCRYLQKKLEERNPQYVQMIFLETHAHVVELMTDPFGNYLCQKLLEYAND 657
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +++ T QL +A +++ G+ +++K+I+ + P + V+ AL+ L+
Sbjct: 658 EQRTVLV--NTAAPQLVKIA-LNQHGTRALQKMIEYIT-TPEQICTVIHALQSKVVELIQ 713
Query: 133 TKPGSSVILQCLEPSYNHKN--DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G+ VI +CL +N FI+ A E C+ + H GC L ID+ G+++ +
Sbjct: 714 DLNGNHVIQKCLNRWKKEENKLQFIFDAVGEDCVAVGTHRHGCCVLQRCIDHAAGAQKVK 773
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I+ +A L GNYVVQ++L L DP L + + RG +LS K S V++K
Sbjct: 774 LIQKITAHAIELVVDPFGNYVVQYILDLADPMLSEPLILKFRGRVCELSKQKFSSNVIEK 833
Query: 251 CLKYQNAV--HYIIEELL-NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
C++ +IEE+L N ++ + D Y NYVIQTA+ + + Q+LV +
Sbjct: 834 CIRVAEPPTKKILIEEMLPNQAELEALLRDSYANYVIQTAMDYASPETK----QQLVDSI 889
Query: 308 QQHLAALRVMKYGSNV 323
+ L A+R+ YG +
Sbjct: 890 RPILPAIRMTPYGRRI 905
>gi|242083470|ref|XP_002442160.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
gi|241942853|gb|EES15998.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
Length = 562
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 155/310 (50%), Gaps = 8/310 (2%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+DQ G + LQ+ L G R +D +F VS +LM +G ++ K + C+ Q
Sbjct: 252 IARDQHGCRLLQQRLDDG-KREVDHIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDAGQRM 310
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++L +T + + S++ G+ +V+KLI+ + + V+ AL+ F L+ G
Sbjct: 311 ALVLTLTADAFVLVRISLNVHGTRAVQKLIESLRTREEISL-VIDALRPGFLELIKDPNG 369
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ +CL+ N I+ AA HCL + GC L I +G R +++ I+
Sbjct: 370 NHVVQKCLQAFEADDNKAIFDAAALHCLDIGMQCHGCCVLQRCIARSRGEHRDKLVAAIA 429
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
N L++ GNYVVQ+V+ L+ P ++ G Y+ LS+ K S VV+KCLK
Sbjct: 430 GNGFKLAQDAYGNYVVQYVIDLKIPNANSSLAQQFEGKYIHLSMQKFSSNVVEKCLKVFK 489
Query: 257 AVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
V II E+L + + Q+ Y NYVI +AL + + S+H L ++ H+ L
Sbjct: 490 EVDKAKIILEILATPHLEQLLQHPYANYVIYSAL----QNSKGSLHSALTNAIRPHVELL 545
Query: 315 RVMKYGSNVY 324
R Y +Y
Sbjct: 546 RTSPYCKRIY 555
>gi|325094905|gb|EGC48215.1| pumilio family RNA binding protein [Ajellomyces capsulatus H88]
Length = 651
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 162/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ + +DQ G +YLQ+ L + +F ELM+ +G ++ K +E N+
Sbjct: 244 ELYGMCKDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSND 303
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I QL +A +++ G+ +++K+I+ ++ P V++AL+ L+
Sbjct: 304 EQRTALINNAA--PQLVKIA-LNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQ 359
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A E C+ + H GC L ID+ G +R +++
Sbjct: 360 DLNGNHVIQKCLNRLSATDAQFIYDAVGESCVPVGTHRHGCCVLQRCIDHASGDQRARLI 419
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P I+ IC + RG+ LS K S V++KC+
Sbjct: 420 EQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCI 479
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +++E+L ++ ++ D + NYV+QTA+ + R +LV ++
Sbjct: 480 RTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAMDFADPEYRT----KLVEAIRPI 535
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 536 LPAIRQTPHGRRI 548
>gi|189195174|ref|XP_001933925.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979804|gb|EDU46430.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1009
Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/314 (26%), Positives = 158/314 (50%), Gaps = 10/314 (3%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+++ L +DQ G ++LQ+ L + + +F + ELM+ +G ++ K +E CN
Sbjct: 594 QEIYGLCKDQHGCRFLQKKLEERNPEHIQIIFDETALHVVELMTDPFGNYLCQKLLEYCN 653
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ Q ++ T + + ++ G+ +++K+I+ ++ ++ AL L+
Sbjct: 654 DEQRNTLVRNAT---SAMVQIAFNQHGTRALQKMIEFIS-TDEQTQMIIQALSGEVVDLI 709
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL + + FI+ A EHC+ + H GC L ID+ G ++ +
Sbjct: 710 QDLNGNHVIQKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHASGFQKVDL 769
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ I+ ++ L + GNYV+Q++L L D +C +G +LS+ K S V++KC
Sbjct: 770 IRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQGKICELSMQKFSSNVIEKC 829
Query: 252 LKYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ +IEELL+ +Q+ + D +GNYVIQTAL L +H L+ ++
Sbjct: 830 IRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTAL--EFAPAELCMH--LIEMMRP 885
Query: 310 HLAALRVMKYGSNV 323
L ++R YG +
Sbjct: 886 LLPSIRQTPYGRRI 899
>gi|116199395|ref|XP_001225509.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
gi|88179132|gb|EAQ86600.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
Length = 1010
Score = 132 bits (333), Expect = 2e-28, Method: Composition-based stats.
Identities = 88/315 (27%), Positives = 164/315 (52%), Gaps = 16/315 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDK--LFWV-VSGFTFELMSGQYGRFVFGKFIESC 70
++SL +DQ G +YLQ+ L ++RI D+ + W+ + ELM+ +G ++ K +E C
Sbjct: 601 IYSLCKDQHGCRYLQKQL---ENRIPDQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYC 657
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+ + +++ T + ++++ G+ +++K+I+ V + ++ AL+ L
Sbjct: 658 NDDERTVLVQNSTSN---MVTIALNQHGTRALQKMIEHVT-TQVQINLIVEALRNQVVEL 713
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL FI+ A +HC+ + H GC L ID+ G+++
Sbjct: 714 IQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGAQKIW 773
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I+ +A +L + GNYVVQ+++ L +P + + +G LS K S VV+K
Sbjct: 774 LIERITDHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVKQFQGRIGMLSKHKFSSNVVEK 833
Query: 251 CLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CL+ + + I+ ELL +I ++ D +GNYVIQTAL + RL+ ++
Sbjct: 834 CLRCAAEESRDMIVSELLTPGEIDRLLRDSFGNYVIQTALDYATPMSK----HRLIEAIR 889
Query: 309 QHLAALRVMKYGSNV 323
L ++R YG +
Sbjct: 890 PILPSIRATPYGRRI 904
>gi|225448285|ref|XP_002271130.1| PREDICTED: uncharacterized protein LOC100266352 [Vitis vinifera]
Length = 810
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 156/313 (49%), Gaps = 7/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G + + +F + ELM +G ++ K ++ CNE
Sbjct: 496 IYMIAKDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEE 555
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I++ +T + + S++ G+ V+KLI+ + + V+SAL+ F L+
Sbjct: 556 QRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQ-QISRVISALEPGFLALIKD 614
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N FI+ AA ++C+ +A H+ GC L I + G R+ ++
Sbjct: 615 LNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQHGCCVLQRCISHSTGEYRENLVA 674
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N L++ GNYVVQ +L L+ P + G+YV LS + S VV+KCL
Sbjct: 675 EISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVHLSTQRFSSHVVEKCLT 734
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ I+ ELL++ Q+ + NYVIQ AL + +H + ++ H
Sbjct: 735 VCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKAL----QVYEGPLHNAFIEAIESHK 790
Query: 312 AALRVMKYGSNVY 324
A +R Y ++
Sbjct: 791 AIMRNSPYSKKIF 803
>gi|169596899|ref|XP_001791873.1| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
gi|160707392|gb|EAT90868.2| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 132 bits (333), Expect = 2e-28, Method: Composition-based stats.
Identities = 86/314 (27%), Positives = 158/314 (50%), Gaps = 10/314 (3%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+++SL +DQ G ++LQ+ L L +F + ELM+ +G ++ K +E N
Sbjct: 602 QEIYSLCKDQHGCRFLQKKLEERVPESLQIIFDETAPHVVELMTDPFGNYLCQKLLEFAN 661
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ Q ++ + ++++ G+ +++K+I+ ++ ++ AL L+
Sbjct: 662 DEQRNTLVRNAC---PAMVSIALNQHGTRALQKMIEFIS-TEEQTEMIIQALSGQVVDLI 717
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL + + FI+ A EHC+ + H GC L ID+ G ++ +
Sbjct: 718 QDLNGNHVIQKCLNHLKSSEAQFIFDAVGEHCVIVGTHRHGCCVLQRCIDHASGYQKVDL 777
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ I+ ++ L + GNYVVQ++L L D +C RG V+LS K S V++KC
Sbjct: 778 VRKITAHSFHLVQDPFGNYVVQYILDLNDAAFTTPMCEGFRGKVVELSKQKFSSNVIEKC 837
Query: 252 LK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ +A +IEEL + +++ + D YGNYV+QTAL L +H L+ ++
Sbjct: 838 IRCAEMSAKQMLIEELCDVEELEHLMRDSYGNYVVQTAL--EFAPPALCIH--LIEIMRP 893
Query: 310 HLAALRVMKYGSNV 323
L ++R YG +
Sbjct: 894 ILPSIRQTPYGRRI 907
>gi|195635993|gb|ACG37465.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 8/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G + LQ+ L G R +D +F VS +LM +G ++ K + C++
Sbjct: 166 MYHMARDQHGCRLLQQRLDDG-KREVDYIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDDG 224
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++L +T + S++ G+ +V+KLI+ ++ + VM AL+ F L+
Sbjct: 225 QRMTLVLTLTADPFALVRISLNVHGTRAVQKLIERLSAREEIGL-VMDALRPGFLELIKD 283
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL ++ N I+ AA HC+ + GC L I +G R +++
Sbjct: 284 TNGNHVVQKCLHSFASNDNKAIFAAAALHCVDIGMQIHGCCVLQRCIARSRGEHRDKLVA 343
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ N L++ GNYVVQ VL L+ P ++ G Y+ LS+ K S VV+KCLK
Sbjct: 344 AIAHNGFKLAQDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLSMQKFSSNVVEKCLK 403
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
V II ELL + + Q+ Y NYV+ +AL + + S+H L+ + H
Sbjct: 404 VFKEVDKAKIILELLATPHLEQLLPHCYANYVVYSAL----KNSKGSLHSALINAILPHE 459
Query: 312 AALRVMKYGSNVY 324
LR Y +Y
Sbjct: 460 ELLRTSPYCKRIY 472
>gi|357120480|ref|XP_003561955.1| PREDICTED: uncharacterized protein LOC100842718 [Brachypodium
distachyon]
Length = 685
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 155/305 (50%), Gaps = 8/305 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ G + D +F + ELM+ + ++ K ++ C+E
Sbjct: 373 IYFMAKDQNGCRFLQQKFEEGKQHV-DAIFEGIINHIAELMTNSFANYLVQKLLDVCDEE 431
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q II +T L S++ G+ +V+KLI+ V + + ++SA++ F L+
Sbjct: 432 QRLRIIAVLTEDPVKLLRISLNTHGTRAVQKLIETVK-IRKQIVLIISAIQPGFMHLVND 490
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL +N FI++AA HC +A H GC L I + +G + +++
Sbjct: 491 LNGNHVIQKCLTNFGVEENKFIFEAAAAHCFEMAIHRHGCCVLQKCITSARGEYQAKLIV 550
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ +A L++ GNYVVQ+VL + P + G+YV LS K S VV+KCLK
Sbjct: 551 EVCAHAFQLAQDPFGNYVVQYVLDQKIPSANAHLAAQFEGNYVYLSKQKVSSNVVEKCLK 610
Query: 254 Y--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
I+ +L++ Q+ D + NYVI TAL + R +H LV ++ H
Sbjct: 611 VFSDEDKAAIVFDLISVTHFEQLLQDPFANYVIHTALVNS----RGHLHNALVEAIRPHE 666
Query: 312 AALRV 316
ALR
Sbjct: 667 EALRT 671
>gi|400597533|gb|EJP65263.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1043
Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 162/312 (51%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 624 IYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 683
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + QD + + ++++ G+ +++K+I+ V + P ++ ++ AL+ L+
Sbjct: 684 ERTVLIQNAS-QDMVRI--ALNQHGTRALQKMIEYV-NTPQQVHLIIEALRFRVVELIQD 739
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL + FI+ A +C+ + H GC L ID+ G +++ ++
Sbjct: 740 LNGNHVIQKCLNKLTSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQKQWLVA 799
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + + +G LS K S V++KCL+
Sbjct: 800 RITAHARILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNVIEKCLR 859
Query: 254 YQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ I+EE+L +I ++ D + NYVIQTAL Q + RLV ++ L
Sbjct: 860 CAQPPSKDMIVEEMLVPAEIERLLRDSFANYVIQTALEFATPQ----LKYRLVEAIRPIL 915
Query: 312 AALRVMKYGSNV 323
+R YG +
Sbjct: 916 PQIRTTPYGRRI 927
>gi|212275350|ref|NP_001130994.1| uncharacterized protein LOC100192099 [Zea mays]
gi|194690654|gb|ACF79411.1| unknown [Zea mays]
gi|413916502|gb|AFW56434.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 156/313 (49%), Gaps = 8/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G + LQ+ L G R +D +F VS +LM +G ++ K + C++
Sbjct: 166 MYHMARDQHGCRLLQQRLDDG-KREVDYIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDDG 224
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++L +T + S++ G+ +V+KLI+ ++ + VM AL+ F L+
Sbjct: 225 QRMTLVLTLTADPFALVRISLNVHGTRAVQKLIERLSAREEIGL-VMDALRPGFLELIKD 283
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL ++ N I+ AA HC+ + GC L I +G R +++
Sbjct: 284 TNGNHVVQKCLHSFASNDNKAIFAAAALHCVDIGMQIHGCCVLQRCIARSRGEHRDKLVA 343
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ N L+ GNYVVQ VL L+ P ++ G Y+ LS+ K S VV+KCLK
Sbjct: 344 AIAHNGFKLAEDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLSMQKFSSNVVEKCLK 403
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
V II ELL + + Q+ Y NYV+ +AL + + S+H L+ + H
Sbjct: 404 VFKEVDKAKIILELLATPHLEQLLPHCYANYVVYSAL----KNSKGSLHSALINAILPHE 459
Query: 312 AALRVMKYGSNVY 324
LR Y +Y
Sbjct: 460 ELLRTSPYCKRIY 472
>gi|342879890|gb|EGU81123.1| hypothetical protein FOXB_08397 [Fusarium oxysporum Fo5176]
Length = 1061
Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats.
Identities = 84/313 (26%), Positives = 160/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ L +DQ G +YLQ+ L ++ + ++ + ELM+ +G ++ K +E CN+
Sbjct: 610 NIYELCKDQHGCRYLQKKLEERNADQVHIIWVETNQHVIELMTDPFGNYLCQKLLEFCND 669
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ ++I + QD + + ++++ G+ +++K+I+ V+ P ++ ++ AL+ L+
Sbjct: 670 DERTVLIQNAS-QDMVRI--ALNQHGTRALQKMIEYVS-TPQQVHIIIEALRYRVVELIQ 725
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FI+ A C+ + H GC L ID+ G ++ ++
Sbjct: 726 DLNGNHVIQKCLNKLTPPDAQFIFDAVGGSCVEVGTHRHGCCVLQRCIDHASGDQKLWLI 785
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ +A L + GNYVVQ+++ L +P + I + LS K S V++KCL
Sbjct: 786 QRITEHARILVQDPFGNYVVQYIIDLNEPLFTEPIVLTFKDCITQLSRHKFSSNVIEKCL 845
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + I+EELL + ++ ++ D + NYVIQTAL + RLV ++
Sbjct: 846 RCAQPPSKDLIVEELLRNQEMERLLRDSFANYVIQTALEYATPHQK----HRLVEAIRPI 901
Query: 311 LAALRVMKYGSNV 323
L +R YG +
Sbjct: 902 LPQIRTTPYGRRI 914
>gi|389742126|gb|EIM83313.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1029
Score = 132 bits (331), Expect = 3e-28, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 20/319 (6%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
SL +DQ G +YLQ+ L G D +F G +LM+ +G ++ K +E + Q
Sbjct: 575 SLCKDQHGCRYLQKKLEEGVPDHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTDEQR 634
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA-------HLPPLLYHVMSALKRLFK 128
+I + + S++ G+ +V+K+I ++ ++ ++ AL
Sbjct: 635 NIICESVATD---LVNISLNMHGTRAVQKMIDFLSTRRQTDHRYHGQIHSIIVALSLHVV 691
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L+ G+ VI +CL N FIY A +C+ +A H GC L ID+ +R
Sbjct: 692 VLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQR 751
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
Q+++ I+ NA +L + GNYVVQ++L L D DA+ G+ LS+ K S V+
Sbjct: 752 IQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVI 811
Query: 249 QKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+KC++ +I+ELLN ++ ++ D YGNY +QTAL D QR LV
Sbjct: 812 EKCIRVAEHGTRKMLIDELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPAQRALLV 865
Query: 305 TKLQQHLAALRVMKYGSNV 323
++ L +R YG +
Sbjct: 866 DGIRPVLPLIRNTPYGKRI 884
>gi|320591503|gb|EFX03942.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 1112
Score = 132 bits (331), Expect = 3e-28, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 159/312 (50%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 658 IYELCKDQHGCRYLQKQLENRNPEQVHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNDD 717
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I QD + + ++++ G+ +++K+I+ ++ + ++ AL+ L+
Sbjct: 718 ERTVLIQNAA-QDMVRI--ALNQHGTRALQKMIEFIS-TEAQVQIIIEALRHCVVDLIKD 773
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A C+ + H GC L ID+ G ++ ++
Sbjct: 774 LNGNHVIQKCLNKLTPANAQFIFDAVGGACVEVGTHRHGCCVLQRCIDHASGDQKVWLIQ 833
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ A +L + GNYVVQ+++ L D + + RG LS K S VV+KCL+
Sbjct: 834 RITEEAVTLIQDPYGNYVVQYIIDLNDLNFTEPLVARFRGRICSLSRHKFSSNVVEKCLR 893
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ + I+EE+LNS ++ ++ D Y NYV+QTAL + RLV ++ L
Sbjct: 894 CSLEPSRDMIVEEVLNSGEVERLVRDSYANYVVQTALEYATPY----MKARLVDSIRPFL 949
Query: 312 AALRVMKYGSNV 323
A +R +G +
Sbjct: 950 AQIRSTPHGRRI 961
>gi|224136880|ref|XP_002326968.1| predicted protein [Populus trichocarpa]
gi|222835283|gb|EEE73718.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 7/315 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +LA+D G ++LQ+ + S +D LF+ V G+ L+ +G +V K +E +E
Sbjct: 190 VVALAKDPYGCKFLQKLIESATREQIDMLFYEVIGYVGGLIVDPFGNYVVQKLVEVLSEE 249
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+ +T D + +D G+ V+KL+ + + P + V+SAL + L+
Sbjct: 250 QRTGILRMLTRTDFQLVRICLDVHGTRVVQKLLNCITN-PQQVSIVVSALSQGAVALITD 308
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G VI + N +I + E+C +A ++ GC L ++ +G R ++L
Sbjct: 309 SNGHHVIQHFFKHFSTEDNKYILKQVAENCFGIATNKSGCCVLQRCVEYSEGEARDRLLA 368
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL- 252
I NA L+ GNYVVQH+L L+ P + + + +G Y+ LS K GS VV+ CL
Sbjct: 369 EIIANALLLAEDHYGNYVVQHILKLKSPEITENLLAQFKGSYMALSCNKYGSNVVESCLL 428
Query: 253 -KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ II ELL + + + D +GN+VIQ AL+ + Q V + LV +Q++
Sbjct: 429 TTREEQSTQIILELLRNPLVSMLLVDPFGNFVIQKALSISQGQ----VQRYLVALIQRNA 484
Query: 312 AALRVMKYGSNVYKW 326
+R YG V W
Sbjct: 485 QKMRSNIYGQKVLVW 499
>gi|328768244|gb|EGF78291.1| hypothetical protein BATDEDRAFT_37298 [Batrachochytrium
dendrobatidis JAM81]
Length = 636
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 162/313 (51%), Gaps = 18/313 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
L++DQ G +YLQ L + + LD ++ + ELM+ +G ++ K +E C E Q
Sbjct: 261 LSKDQHGCRYLQRKLEEQNEKHLDMIYVEIFPNFAELMTDPFGNYLCQKLLEYCTEEQRN 320
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF----LMM 132
+++ + S++ G+ +V+KLI+ ++ +H +S + R L+
Sbjct: 321 MLVEHVAPD---LAAVSLNMHGTRAVQKLIEFLS-----THHQISTVVRALALNVVSLIK 372
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL + N FIY A +HC +A H GC L ID+ S+R Q++
Sbjct: 373 DLNGNHVIQKCLNRLSHENNQFIYNAVRKHCTEIATHRHGCCVLQRCIDHASDSQRVQLV 432
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ +A +L + GNYVVQ+VL L + +AI G+ LS+ K S V++KC+
Sbjct: 433 AEITYHALTLVQDPFGNYVVQYVLDLAEIKFSEAIVHRFLGNICLLSVQKFSSNVIEKCI 492
Query: 253 KYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ ++ +I+ELLN +++ ++ D Y NYV+QT+L RL +LV ++
Sbjct: 493 RVASSETRALLIDELLNKERLDKLLRDSYANYVVQTSLDYAEPAQRL----QLVECIRPI 548
Query: 311 LAALRVMKYGSNV 323
L ++R YG +
Sbjct: 549 LPSIRNTPYGKRI 561
>gi|322710722|gb|EFZ02296.1| RNA-binding protein, putative [Metarhizium anisopliae ARSEF 23]
Length = 1023
Score = 132 bits (331), Expect = 3e-28, Method: Composition-based stats.
Identities = 88/320 (27%), Positives = 165/320 (51%), Gaps = 14/320 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 591 IYELCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 650
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + QD + + ++++ G+ +++K+I+ V+ P ++ ++ AL+ L+
Sbjct: 651 ERTVLIQNAS-QDMVRI--ALNQHGTRALQKMIEYVS-TPQQVHLIIEALRFRVVELIQD 706
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL + FI+ A +C+ + H GC L ID+ G ++ ++
Sbjct: 707 LNGNHVIQKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQKPWLVG 766
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + + +G LS K S V++KCL+
Sbjct: 767 RITEHARILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNVIEKCLR 826
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ--RLVTKLQQ 309
A I+EELL ++ ++ D + NYVIQTAL + + HQ RLV ++
Sbjct: 827 CSQAPSKDMIVEELLAPQEMERLLRDSFANYVIQTAL------EFATPHQKYRLVESIRP 880
Query: 310 HLAALRVMKYGSNVYKWTTA 329
L +R YG + +A
Sbjct: 881 ILPQIRTTPYGRRIQAKVSA 900
>gi|322696542|gb|EFY88333.1| RNA-binding protein, putative [Metarhizium acridum CQMa 102]
Length = 1012
Score = 132 bits (331), Expect = 3e-28, Method: Composition-based stats.
Identities = 88/320 (27%), Positives = 165/320 (51%), Gaps = 14/320 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 581 IYELCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 640
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + QD + + ++++ G+ +++K+I+ V+ P ++ ++ AL+ L+
Sbjct: 641 ERTVLIQNAS-QDMVRI--ALNQHGTRALQKMIEYVS-TPQQVHLIIEALRFRVVELIQD 696
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL + FI+ A +C+ + H GC L ID+ G ++ ++
Sbjct: 697 LNGNHVIQKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQKPWLVG 756
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + + +G LS K S V++KCL+
Sbjct: 757 RITEHARILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNVIEKCLR 816
Query: 254 YQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ--RLVTKLQQ 309
A I+EELL ++ ++ D + NYVIQTAL + + HQ RLV ++
Sbjct: 817 CSQAPSKDMIVEELLAPQEMERLLRDSFANYVIQTAL------EFATPHQKYRLVESIRP 870
Query: 310 HLAALRVMKYGSNVYKWTTA 329
L +R YG + +A
Sbjct: 871 ILPQIRTTPYGRRIQAKVSA 890
>gi|83765714|dbj|BAE55857.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 641
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 158/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 239 ELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSND 298
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 299 EQRTALINNAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIHALEDHVVELVQ 354
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G +R +++
Sbjct: 355 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLI 414
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C RG+ LS K S V++KCL
Sbjct: 415 AQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCL 474
Query: 253 KYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +IEE+L+ ++ ++ D + NYV+QTA+ + R RL+ ++
Sbjct: 475 RTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADSETRT----RLIDAIRPI 530
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 531 LPSIRQTPHGRRI 543
>gi|409051228|gb|EKM60704.1| hypothetical protein PHACADRAFT_246773 [Phanerochaete carnosa
HHB-10118-sp]
Length = 976
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 14/315 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G +YLQ+ L G D +F G ELM+ +G ++ K +E C +
Sbjct: 544 EIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFGHFPELMTDPFGNYLCQKLLEYCTD 603
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q LI + Q + S++ G+ +V+K+I ++ ++ ++ AL L+
Sbjct: 604 EQRNLICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRR-QIHSIIVALSLHVVVLIK 659
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL N FIY A +C+ +A H GC L +D+ +R Q++
Sbjct: 660 DLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCVDHASEPQRIQLV 719
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ I+ NA +L + GNYVVQ++L L D DA+ G+ LS+ K S V++KC+
Sbjct: 720 NEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCV 779
Query: 253 KY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTKLQ 308
+ + +I ELLN ++ ++ D YGNY +QTAL D QR LV ++
Sbjct: 780 RVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPTQRALLVEGIR 833
Query: 309 QHLAALRVMKYGSNV 323
L +R YG +
Sbjct: 834 PVLPLIRNTPYGKRI 848
>gi|341038523|gb|EGS23515.1| pumilio domain-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1033
Score = 131 bits (330), Expect = 4e-28, Method: Composition-based stats.
Identities = 85/322 (26%), Positives = 165/322 (51%), Gaps = 11/322 (3%)
Query: 4 IAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVF 63
++ E C +++SL +DQ G +YLQ+ L + + ++ V+ ELM +G ++
Sbjct: 589 LSLEQCAG-NIYSLCKDQHGCRYLQKQLENRIPAQIHMIWLEVNQHIVELMMDPFGNYLC 647
Query: 64 GKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSAL 123
K +E C++ + ++I + + ++++ G+ +++K+I+ V P + ++ AL
Sbjct: 648 QKLVEFCSDEERTVLIQNAAPE---MVRIALNQHGTRALQKMIEHVT-TPAQVNLIVEAL 703
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
+ L+ G+ VI +CL FI+ A ++C+ + H GC L ID+
Sbjct: 704 RHQVVELIQDLNGNHVIQKCLNKLSATDASFIFDAVGKNCVEVGTHRHGCCVLQRCIDHA 763
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
G+++ ++ I+ +A +L + GNYVVQ+++ L + + + +G + LS K
Sbjct: 764 DGAQKVWLIECITAHAVTLVQDPFGNYVVQYIIDLNEETFTEPLVNQFKGRIISLSKHKF 823
Query: 244 GSFVVQKCLKYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
S VV+KCL+ + A I+ ELL ++ ++ D + NYVIQTAL ++
Sbjct: 824 SSNVVEKCLRCASDAARDMIVNELLTPGEMERLLRDSFANYVIQTALDYATA----NMKP 879
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
RLV ++ L ++R YG +
Sbjct: 880 RLVEAIRPSLPSIRATPYGRRI 901
>gi|412986524|emb|CCO14950.1| predicted protein [Bathycoccus prasinos]
Length = 699
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 169/333 (50%), Gaps = 18/333 (5%)
Query: 5 AFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFG 64
+ E C + LA+DQ G ++LQ S +D F + +LM +G ++
Sbjct: 364 SIEECVGQ-ISILARDQYGCRFLQRKFDEDGSAAIDACFDEIIEEAVDLMMDPFGNYLLQ 422
Query: 65 KFIESCNESQLALIILKITFQDQ-----LFLLASV--DKFGSSSVKKLIKVVAHLPPLLY 117
K +E C++ Q A ++ ++ ++ L L S+ + G+ +V+KLI+ ++ +
Sbjct: 423 KLLECCSDKQRADVVRAVSVVNENANTGLPELVSIALNAHGTRAVQKLIETLSSDEEIEL 482
Query: 118 HVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLN 177
AL+ L+ G+ V+ +CL+ N FIY+AA +H + +A H GC L
Sbjct: 483 -TTKALRPGVVTLIKDLNGNHVVQRCLQRLSAEDNQFIYEAAKKHSVEIATHRHGCCVLQ 541
Query: 178 NFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVD 237
ID+ +++ ++ I+ A +LSR GNYVVQ++L L + + L G+Y +
Sbjct: 542 RCIDHATEEQKRPLVQEIADQALTLSRDPFGNYVVQYILDLGLSWANAEVMMRLVGNYAE 601
Query: 238 LSLTKCGSFVVQKCLKYQNA-----VHYIIEELLNSDQILQVANDKYGNYVIQTALAETM 292
LS+ K S VV+KCLK + + ++ E+++S + ++ D YGNYV+Q+ L T
Sbjct: 602 LSMQKFSSNVVEKCLKLADQQLEEHRNVVVREIMSSPLLDRLLMDPYGNYVVQSTLMVT- 660
Query: 293 RQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
+ +H LV +++ HL ++ +G + +
Sbjct: 661 ---KGPLHADLVERIRPHLPLIKNSPFGKRILR 690
>gi|259489449|tpe|CBF89730.1| TPA: RNA-binding protein, putative (AFU_orthologue; AFUA_1G02510)
[Aspergillus nidulans FGSC A4]
Length = 650
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 158/314 (50%), Gaps = 10/314 (3%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++++ L +DQ G +YLQ L + L +F ELM+ +G ++ K +E N
Sbjct: 239 NEIYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSN 298
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ Q +++ K QL +A +++ G+ +++K+I+ ++ V+ ALK L+
Sbjct: 299 DEQRTVLVNKAA--PQLVKIA-LNQHGTRALQKMIEFIS-TEEQTQTVIDALKDHVVELV 354
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL K+ FIY A C+ + H GC L ID+ G++R ++
Sbjct: 355 QDLNGNHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARL 414
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ I+ NA +L + GNYVVQ++L L + + +C LS K S V++KC
Sbjct: 415 IEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHKFSSNVIEKC 474
Query: 252 LKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
L+ + +IEE+L D++ ++ D Y NYV+QTA M + R+V ++
Sbjct: 475 LRTADEEMRRQMIEEMLAGDELEKMLRDSYANYVVQTA----MDYADPATRARIVKYIEP 530
Query: 310 HLAALRVMKYGSNV 323
L +LR +G +
Sbjct: 531 ILPSLRGTPHGRRI 544
>gi|238483549|ref|XP_002373013.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
gi|220701063|gb|EED57401.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
Length = 911
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 158/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 509 ELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSND 568
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 569 EQRTALINNAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIHALEDHVVELVQ 624
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G +R +++
Sbjct: 625 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLI 684
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C RG+ LS K S V++KCL
Sbjct: 685 AQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCL 744
Query: 253 KYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +IEE+L+ ++ ++ D + NYV+QTA+ + R RL+ ++
Sbjct: 745 RTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADSETRT----RLIDAIRPI 800
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 801 LPSIRQTPHGRRI 813
>gi|449550572|gb|EMD41536.1| hypothetical protein CERSUDRAFT_110088 [Ceriporiopsis subvermispora
B]
Length = 1043
Score = 130 bits (327), Expect = 9e-28, Method: Composition-based stats.
Identities = 93/322 (28%), Positives = 157/322 (48%), Gaps = 20/322 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ +L +DQ G +YLQ+ L G D +F +LM+ +G ++ K +E +
Sbjct: 581 EIATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTD 640
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA-------HLPPLLYHVMSALKR 125
Q +I + Q + S++ G+ +V+K+I ++ ++ ++ AL
Sbjct: 641 EQRNVICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQADPKYNAQIHSIILALSL 697
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L+ G+ VI +CL N FIY A +C+ +A H GC L ID+
Sbjct: 698 HVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASD 757
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
++R Q+++ I+ NA +L + GNYVVQ++L L D DA+ G+ LS+ K S
Sbjct: 758 AQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSS 817
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR- 302
V++KC++ + +I ELLN ++ ++ D YGNY +QTAL D QR
Sbjct: 818 NVIEKCVRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPSQRA 871
Query: 303 -LVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 872 LLVEGIRPVLPLIRNTPYGKRI 893
>gi|357489613|ref|XP_003615094.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516429|gb|AES98052.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 712
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 157/315 (49%), Gaps = 7/315 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+F +A+DQ G ++LQ + G ++ +F V ELM +G ++ K +E C +
Sbjct: 400 MFHMAKDQNGGRFLQGMVEKGTVEDMEMVFNGVIDNVVELMMDPFGNYLVQKLLEFCRDD 459
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L +T + S + G+ SV+KLI + + V SA+ F L+
Sbjct: 460 QRLQIVLMLTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIAL-VRSAILPGFLDLVKD 518
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL N+FI+ AA + +A H+ GC L ID KG ++++
Sbjct: 519 LNGNHVIQRCLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKGKSLEKLVK 578
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I + SL++ GNYV+Q+++ L+ P + + +G+YV LS K S VV+KCL
Sbjct: 579 EICKHGFSLAQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSSHVVEKCLI 638
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
Y I++ELL+ ++ D Y NYV+Q AL T + S+H LV ++ H
Sbjct: 639 YIVETRARIVQELLSVPHFERLLQDPYANYVVQKALEYT----KGSLHASLVEAVRAH-K 693
Query: 313 ALRVMKYGSNVYKWT 327
LR Y ++ T
Sbjct: 694 ILRTSPYCKRIFSKT 708
>gi|225554623|gb|EEH02919.1| pumilio RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 793
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 162/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ + +DQ G +YLQ+ L + + +F ELM+ +G ++ K +E N+
Sbjct: 364 ELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSND 423
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I QL +A +++ G+ +++K+I+ ++ P V++AL+ L+
Sbjct: 424 EQRTALINNAA--PQLVKIA-LNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQ 479
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R +++
Sbjct: 480 DLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLI 539
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P I+ IC + RG+ LS K S V++KC+
Sbjct: 540 EQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCI 599
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +++E+L ++ ++ D + NYV+QTA+ + R +LV ++
Sbjct: 600 RTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAMDFADPEYRT----KLVEAIRPI 655
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 656 LPAIRQTPHGRRI 668
>gi|330925771|ref|XP_003301186.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
gi|311324291|gb|EFQ90713.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
Length = 1012
Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats.
Identities = 83/314 (26%), Positives = 157/314 (50%), Gaps = 10/314 (3%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+++ L +DQ G ++LQ+ L + + +F + ELM+ +G ++ K +E CN
Sbjct: 596 QEIYGLCKDQHGCRFLQKKLEERNHEHIQIIFDETAPHVVELMTDPFGNYLCQKLLEFCN 655
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ Q ++ T + + ++ G+ +++K+I+ ++ ++ AL L+
Sbjct: 656 DEQRNTLVRNAT---PAMVQIAFNQHGTRALQKMIEFIS-TDEQTQMIIQALSGEVVDLI 711
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL + + FI+ A EHC+ + H GC L ID+ G ++ +
Sbjct: 712 QDLNGNHVIQKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHASGFQKVDL 771
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ I+ ++ L + GNYV+Q++L L D +C + +LS+ K S V++KC
Sbjct: 772 IRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQTKICELSMQKFSSNVIEKC 831
Query: 252 LKYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ +IEELL+ +Q+ + D +GNYVIQTAL L +H L+ ++
Sbjct: 832 IRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTAL--EFAPAELCMH--LIEMMRP 887
Query: 310 HLAALRVMKYGSNV 323
L ++R YG +
Sbjct: 888 LLPSIRQTPYGRRI 901
>gi|22330712|ref|NP_177940.2| pumilio 7 [Arabidopsis thaliana]
gi|313471413|sp|Q9C9R6.2|PUM7_ARATH RecName: Full=Putative pumilio homolog 7, chloroplastic;
Short=APUM-7; Short=AtPUM7; Flags: Precursor
gi|332197954|gb|AEE36075.1| pumilio 7 [Arabidopsis thaliana]
Length = 650
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 156/312 (50%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G S +F V ELM +G ++ K ++ C E
Sbjct: 338 VYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 397
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L T + + S++ +G+ V++L++ + + V AL+ F L+
Sbjct: 398 QRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISL-VKLALRPGFLDLIKD 456
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N FI+ AA + C +A H GC L I +R++++
Sbjct: 457 LNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIA 516
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N+ L++ GNY VQ V+ L P + + L+GHYV LS+ K S +V++CL
Sbjct: 517 EISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLM 576
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + I+ EL++ Q+ D Y N+VIQ ALA T + +H LV ++ H +
Sbjct: 577 HCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAAT----KGPLHASLVEVIRPH-S 631
Query: 313 ALRVMKYGSNVY 324
LR Y ++
Sbjct: 632 ILRNNPYCKRIF 643
>gi|317141237|ref|XP_001817859.2| RNA-binding protein [Aspergillus oryzae RIB40]
Length = 992
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 158/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 590 ELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSND 649
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 650 EQRTALINNAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIHALEDHVVELVQ 705
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G +R +++
Sbjct: 706 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLI 765
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C RG+ LS K S V++KCL
Sbjct: 766 AQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCL 825
Query: 253 KYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +IEE+L+ ++ ++ D + NYV+QTA+ + R RL+ ++
Sbjct: 826 RTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADSETRT----RLIDAIRPI 881
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 882 LPSIRQTPHGRRI 894
>gi|391870982|gb|EIT80151.1| RNA-binding protein, putative [Aspergillus oryzae 3.042]
Length = 992
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 158/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 590 ELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSND 649
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 650 EQRTALINNAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIHALEDHVVELVQ 705
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G +R +++
Sbjct: 706 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLI 765
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C RG+ LS K S V++KCL
Sbjct: 766 AQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCL 825
Query: 253 KYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +IEE+L+ ++ ++ D + NYV+QTA+ + R RL+ ++
Sbjct: 826 RTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADSETRT----RLIDAIRPI 881
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 882 LPSIRQTPHGRRI 894
>gi|440631710|gb|ELR01629.1| hypothetical protein GMDG_00005 [Geomyces destructans 20631-21]
Length = 1077
Score = 129 bits (325), Expect = 2e-27, Method: Composition-based stats.
Identities = 84/314 (26%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G ++LQ+ L ++ + ++ + ELM+ +G ++ K +E CN+
Sbjct: 630 EIYSLCKDQHGCRFLQKKLEERNAEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEFCND 689
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ ++I + Q L ++++ G+ +++K+I+ ++ + ++ AL+ L+
Sbjct: 690 EERTVLIENAS---QDLLRIALNQHGTRALQKMIEFIS-TAGQIQTIIEALRYQVVELIQ 745
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FI+ A HC+ + H GC L ID+ G ++ ++
Sbjct: 746 DLNGNHVIQKCLNKLSPLDAQFIFDAVGRHCVDVGTHRHGCCVLQRCIDHASGDQKAWLI 805
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
IS NA +L + GNYVVQ++L L +P + + G LS K S V++KCL
Sbjct: 806 RQISNNAFTLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVGQLSRQKFSSNVIEKCL 865
Query: 253 K--YQNAVHYIIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ + + +IEE+L + L+ + D + NYV+QTAL ++ RL+ ++
Sbjct: 866 RCAQEPSKDMLIEEMLATPADLERLLRDSFANYVVQTALDYA----NPAMKTRLIDAIRP 921
Query: 310 HLAALRVMKYGSNV 323
L +R YG +
Sbjct: 922 ILPQIRTTPYGRRI 935
>gi|302698595|ref|XP_003038976.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
gi|300112673|gb|EFJ04074.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
Length = 480
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 21/323 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ +L +DQ G +YLQ+ L G D +F G +LM+ +G ++ K +E +
Sbjct: 36 EIPALCKDQHGCRYLQKKLEEGLPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTD 95
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL--------LYHVMSALK 124
Q +I + Q + S++ G+ +V+K+I ++ ++ ++ AL
Sbjct: 96 EQRNIICESVA---QELVNISLNMHGTRAVQKMIDFLSTRRQTDGRYNNHQIHSIILALS 152
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
L+ G+ VI +CL N FIY A +C+ +A H GC L ID+
Sbjct: 153 MHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHAS 212
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+R Q+++ I+ NA +L + GNYVVQ++L L D DA+ G+ LS+ K
Sbjct: 213 DHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFAGNVCALSVQKFS 272
Query: 245 SFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
S V++KC++ N +I+ELLN ++ ++ D YGNY +QTAL D QR
Sbjct: 273 SNVIEKCIRVAEHNTRKMLIDELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPAQR 326
Query: 303 --LVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 327 ALLVEGIRPVLPLIRNTPYGKRI 349
>gi|186511600|ref|NP_192624.2| pumilio 11 [Arabidopsis thaliana]
gi|313471422|sp|Q9LDW3.2|PUM11_ARATH RecName: Full=Pumilio homolog 11; Short=APUM-11; Short=AtPUM11
gi|332657281|gb|AEE82681.1| pumilio 11 [Arabidopsis thaliana]
Length = 556
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 165/312 (52%), Gaps = 9/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G + LQ+ + G+ + +F V EL + +G ++ K IE CNE
Sbjct: 246 VYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCNEE 305
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I++++T + L + S++ +G+ V+KLI+ V + V SAL F L
Sbjct: 306 QRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVT-TKEQISLVKSALVPGFLSLFRE 364
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VIL CL+ + N FI +AA + C+ +A GC L + G + ++++
Sbjct: 365 LNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVD 424
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N+ L++ GNY+VQ++ +E + F LRG+YV L+ K GS VV+KCL+
Sbjct: 425 EISRNSLLLAQDPFGNYLVQYI--IEKKVGGVNVLFELRGNYVKLATQKFGSHVVEKCLR 482
Query: 254 -YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
Y + I+ EL++ + D Y NYVIQ AL++T + V LV K++++
Sbjct: 483 YYPESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKT----KGFVRASLVEKVRRY-E 537
Query: 313 ALRVMKYGSNVY 324
L++ Y ++
Sbjct: 538 NLKMTPYCKRIF 549
>gi|398407841|ref|XP_003855386.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
gi|339475270|gb|EGP90362.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
Length = 1060
Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats.
Identities = 80/290 (27%), Positives = 147/290 (50%), Gaps = 7/290 (2%)
Query: 1 LQTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGR 60
+I E T ++++L +DQ G ++LQ L + + + +F V ELM +G
Sbjct: 606 FNSIKVEQLTG-EIYTLCKDQHGCRFLQRKLEERNEQTVQAIFEEVRNHMIELMVDPFGN 664
Query: 61 FVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVM 120
++ K +ES N+ Q +I Q ++++ G+ +++K+I+ ++ P ++
Sbjct: 665 YLCQKLLESANDDQRTELIKNAMPQ---MTKIALNQHGTRALQKMIEFIS-TPEQTALII 720
Query: 121 SALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
AL+ L+ G+ VI +CL ++ FI+ A +C+ + H GC L I
Sbjct: 721 EALRNDVVLLIQDLNGNHVIQKCLNHLSSNDAIFIFDAVGANCITVGTHRHGCCVLQRCI 780
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
D+ G ++ +++ + NA SL + GNYVVQ++L L +P + +C A G +LS
Sbjct: 781 DHADGLQKGEMVDHVIRNAYSLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIANLSR 840
Query: 241 TKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
K S V++KC++ II E++ I ++ D + NYV+QTA+
Sbjct: 841 QKFSSNVMEKCIRCASNETKRAIISEIMAPQTIEKMLRDGFANYVVQTAM 890
>gi|378727687|gb|EHY54146.1| hypothetical protein HMPREF1120_02321 [Exophiala dermatitidis
NIH/UT8656]
Length = 1006
Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 157/312 (50%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
L+ L +DQ G +YLQ L G+ + +F ELM+ +G ++ K E C E
Sbjct: 593 LYELCKDQHGCRYLQRKLEDGNEEHIQAIFAETCPHIIELMTDPFGNYLCQKLFEFCTEE 652
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +I T L +A +++ G+ +++K+I+ V + ++ AL L+
Sbjct: 653 QRTALI--NTAAPALTTIA-LNQHGTRALQKMIEFV-RTEEQVETIIRALSDRVVDLVQD 708
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL ++ FIY A ++C+ + H GC L ID+ +G +R Q++
Sbjct: 709 LNGNHVVQKCLTRLGAERSQFIYDAVGKYCVVVGTHRHGCCVLQRCIDHAQGFQRAQLIA 768
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ A L + GNYVVQ++L L++ +C + G LS K S V++KCL+
Sbjct: 769 RITHCAFDLVQDPFGNYVVQYILDLDEISFTKPLCESFLGRIPQLSKQKFSSNVIEKCLR 828
Query: 254 YQNA--VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
++ +IEE+L +++ ++ D + NYV+QTAL Q ++ RLV ++ L
Sbjct: 829 TADSDTKRRMIEEMLIGNELEKMLRDAFANYVVQTALEFADPQTKM----RLVDAVRPIL 884
Query: 312 AALRVMKYGSNV 323
++ +G +
Sbjct: 885 PMIKQTPHGRRI 896
>gi|451994865|gb|EMD87334.1| hypothetical protein COCHEDRAFT_1113338 [Cochliobolus
heterostrophus C5]
Length = 922
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 160/313 (51%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G ++LQ+ L ++ + +F + ELM+ +G ++ K +E CN+
Sbjct: 508 EIYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFCND 567
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +++ + + ++ G+ +++K+I+ ++ ++ AL L+
Sbjct: 568 EQRNILVRNAA---PAMVQIAFNQHGTRALQKMIEFIS-TDDQTQMIIRALSGQVVDLIQ 623
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL + FI+ A EHC+ + H GC L ID+ G ++ ++
Sbjct: 624 DLNGNHVIQKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKVDLI 683
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ L + GNYVVQ++L L D +C +G +LS K S V++KC+
Sbjct: 684 RKITAHSFHLVQDPFGNYVVQYILDLNDASFTTPMCQGFQGKICELSKQKFSSNVIEKCI 743
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +IEELL+ +Q+ Q+ D YGNYVIQTAL L VH L+ ++
Sbjct: 744 RCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTAL--EFAPAELCVH--LIEAMRPI 799
Query: 311 LAALRVMKYGSNV 323
L ++R YG +
Sbjct: 800 LPSIRQTPYGRRI 812
>gi|281204898|gb|EFA79092.1| Conserved hypothetical protein [Polysphondylium pallidum PN500]
Length = 1346
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 162/316 (51%), Gaps = 16/316 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G ++LQ+ L GD + + +F V + ELM+ +G ++ K +E CN+
Sbjct: 1029 IYPLCRDQHGCRFLQKKLEDGDEPLTEIIFKEVCEYMLELMTDPFGNYLCQKLLEHCNDR 1088
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +II K+ + S++ G+ +V+K+I+ + P + + +L L+
Sbjct: 1089 QRLMIIDKVGPD---IVRISMNMHGTRAVQKMIEFLT-TPEQIALIKKSLANYVVPLIQD 1144
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQA--ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL N FIY + + +C+ +A H GC L ID+ S++ Q+
Sbjct: 1145 LNGNHVIQKCLNKLSPPDNQFIYDSVSSSANCIAVATHRHGCCVLQRCIDHASESQKFQL 1204
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
++ + N+ L + GNYVVQ+VL L P L + G+ L+ K S VV+KC
Sbjct: 1205 INEVISNSLVLVQDPFGNYVVQYVLDLPFPGLATEMAKRFLGNVPILATQKFSSNVVEKC 1264
Query: 252 LKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLVTKL 307
L + + +I+E+++ D + + D + NYVIQT+L AE + H +LV +
Sbjct: 1265 LHVADPMTRGNLIQEIIDCDILHNLLQDPFANYVIQTSLTIAEPHQ------HTKLVEAI 1318
Query: 308 QQHLAALRVMKYGSNV 323
+ HL L+ YG +
Sbjct: 1319 RPHLPMLKNTPYGKRI 1334
>gi|380483203|emb|CCF40767.1| pumilio domain-containing protein [Colletotrichum higginsianum]
Length = 446
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 156/312 (50%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 16 IYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 75
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + ++++ G+ +++K+I+ V P + +++AL+ L+
Sbjct: 76 ERTVLIQNAAVD---MVRIALNQHGTRALQKMIEFVT-TPTQIGMIINALRFQVVELIQD 131
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A +C+ + H GC L ID+ G ++ ++
Sbjct: 132 LNGNHVIQKCLNKLSALDAQFIFDAVGTNCVDVGTHRHGCCVLQRCIDHASGEQKVWLIA 191
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + I + LS K S V++KCL+
Sbjct: 192 KITEHAPILVQDPFGNYVVQYIIDLNEPTFTEPIVRMFKNRIGQLSRHKFSSNVIEKCLR 251
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ + I+EELL+ +I ++ D Y NYVIQTAL + RLV ++ L
Sbjct: 252 CSQEPSRDMIVEELLSPGEIERLLRDSYANYVIQTALEYATPHSKY----RLVDAIRPIL 307
Query: 312 AALRVMKYGSNV 323
A+R YG +
Sbjct: 308 PAIRSTPYGRRI 319
>gi|302412761|ref|XP_003004213.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261356789|gb|EEY19217.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1157
Score = 129 bits (323), Expect = 3e-27, Method: Composition-based stats.
Identities = 87/324 (26%), Positives = 160/324 (49%), Gaps = 11/324 (3%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRF 61
Q + EH ++ L +DQ G +YLQ+ L + + ++ + ELM+ +G +
Sbjct: 758 QNLPLEHVGGQ-IYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGNY 816
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMS 121
+ K +E CN+ + ++I QD + + ++++ G+ +++K+I+ V + ++
Sbjct: 817 LCQKLLEYCNDDERTVLIQNAA-QDMVRI--ALNQHGTRALQKMIEFVT-TSIQVQMIID 872
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
AL+ L+ G+ VI +CL FI+ A HC+ + H GC L ID
Sbjct: 873 ALRYRVVELIQDLNGNHVIQKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRCID 932
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ G+++ ++ I+ +A L + GNYVVQ+++ L +P + + R LS
Sbjct: 933 HADGAQKVWLIGKITEHAPVLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQLSRH 992
Query: 242 KCGSFVVQKCLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
K S V++K L+ A I++ELL ++ ++ D Y NYVIQTAL + +
Sbjct: 993 KFSSNVIEKLLRCSQAQGRDMIVDELLQPGEMDRLLRDSYANYVIQTALEYATPEGK--- 1049
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
R+V ++ L A+R YG +
Sbjct: 1050 -HRMVEVIRPFLPAVRSTPYGRRI 1072
>gi|7267527|emb|CAB78009.1| putative protein [Arabidopsis thaliana]
gi|7321073|emb|CAB82120.1| putative protein [Arabidopsis thaliana]
Length = 524
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 150/279 (53%), Gaps = 4/279 (1%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G + LQ+ + G+ + +F V EL + +G ++ K IE CNE
Sbjct: 246 VYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCNEE 305
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I++++T + L + S++ +G+ V+KLI+ V + V SAL F L
Sbjct: 306 QRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVT-TKEQISLVKSALVPGFLSLFRE 364
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VIL CL+ + N FI +AA + C+ +A GC L + G + ++++
Sbjct: 365 LNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVD 424
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N+ L++ GNY+VQ++ +E + F LRG+YV L+ K GS VV+KCL+
Sbjct: 425 EISRNSLLLAQDPFGNYLVQYI--IEKKVGGVNVLFELRGNYVKLATQKFGSHVVEKCLR 482
Query: 254 -YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAET 291
Y + I+ EL++ + D Y NYVIQ AL++T
Sbjct: 483 YYPESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKT 521
>gi|242808097|ref|XP_002485092.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715717|gb|EED15139.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1001
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 157/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 586 ELYGLCKDQHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSND 645
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I QL +A +++ G+ +++K+I+ V+ P + V+ AL+ L+
Sbjct: 646 DQRTRLIHNAA--PQLVPIA-LNQHGTRALQKMIEFVS-TPQQIQMVIDALRGHVVDLVQ 701
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A HC+ + H GC L ID+ G +R +++
Sbjct: 702 DLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLI 761
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA SL + GNYVVQ++L L +P + +C + G+ LS K S V++KCL
Sbjct: 762 AQITSNAFSLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNVIEKCL 821
Query: 253 KYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ +I+E+L ++ + D Y NYV+QTA+ +R R++ ++
Sbjct: 822 RTAEYPMRRRMIDEILVPRELDAMLRDSYANYVVQTAMDFADADNR----NRIIEAVRPI 877
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 878 LPSIRQTPHGRRI 890
>gi|403414617|emb|CCM01317.1| predicted protein [Fibroporia radiculosa]
Length = 1053
Score = 128 bits (321), Expect = 4e-27, Method: Composition-based stats.
Identities = 97/336 (28%), Positives = 156/336 (46%), Gaps = 37/336 (11%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
SL +DQ G +YLQ+ L G D +F +LM+ +G ++ K +E + Q
Sbjct: 593 SLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTDDQR 652
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYH------------ 118
+I + Q + S++ G+ +V+K+I + A L P +H
Sbjct: 653 NVICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQASLVPARFHYIAYRDGQTDLK 709
Query: 119 -------VMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQ 171
++ AL L+ G+ VI +CL N FIY A +C+ +A H
Sbjct: 710 YNAQIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRH 769
Query: 172 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFAL 231
GC L +D+ +R Q+++ I+ NA +L + GNYVVQ++L L D DA+
Sbjct: 770 GCCVLQRCVDHASDIQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQF 829
Query: 232 RGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALA 289
G+ LS+ K S V++KC++ + +I ELLN ++ ++ D YGNY +QTAL
Sbjct: 830 TGNVCALSVQKFSSNVIEKCVRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL- 888
Query: 290 ETMRQDRLSVHQR--LVTKLQQHLAALRVMKYGSNV 323
D QR LV ++ L +R YG +
Sbjct: 889 -----DYAEPSQRALLVEGIRPVLPLIRNTPYGKRI 919
>gi|171689290|ref|XP_001909585.1| hypothetical protein [Podospora anserina S mat+]
gi|170944607|emb|CAP70718.1| unnamed protein product [Podospora anserina S mat+]
Length = 700
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 168/320 (52%), Gaps = 11/320 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SLA+DQ G ++LQ+ L + + ++ V ELM +G ++ K +E C +
Sbjct: 289 NINSLARDQHGCRFLQKQLENRIPHEVHAIYREVLPHVHELMIDPFGNYLCQKLLEYCTD 348
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ +I K + +D + + ++++ G+ +++K+I+ V++ + + ALK L+
Sbjct: 349 DERTELI-KNSAKDMVPI--ALNQHGTRALQKMIEHVSNEV-QIQMITDALKMQVVTLIQ 404
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL ++ FI+ A E+C+ + H GC L ID+ G ++ ++
Sbjct: 405 DLNGNHVIQKCLNKLSPEQSHFIFNAVGENCIDVGTHRHGCCVLQRCIDHANGQQKAWLI 464
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA L + GNYV+Q+++ L +P + + R H + LS K S VV+KCL
Sbjct: 465 QCITNNAYRLVQDPFGNYVIQYIIDLNEPSFTEPLVAQFRTHILTLSKLKFSSNVVEKCL 524
Query: 253 K--YQNAVHYIIEELLNS-DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ + + + I+ ELL++ +I + D Y NYV QTAL + QRLV ++
Sbjct: 525 RCSSEQSKNMIVSELLDAGSEIERCLRDSYANYVYQTALDHGTN----DMKQRLVDLIRP 580
Query: 310 HLAALRVMKYGSNVYKWTTA 329
HLA++R YG + +A
Sbjct: 581 HLASIRNTPYGRRISAKISA 600
>gi|225459320|ref|XP_002284170.1| PREDICTED: uncharacterized protein LOC100257510 [Vitis vinifera]
Length = 724
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 7/315 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++SLA+D G ++LQ + +F ELM +G ++ K + CNE
Sbjct: 412 IYSLAKDHNGCRFLQRMFDGATVEDVQLVFNETIKHVVELMMNPFGNYLMQKLFDVCNED 471
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L +T + + S++ G+ V+KL+ + + V+ AL+ F L
Sbjct: 472 QRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTLKTRQQISLVVL-ALEPYFLDLTKD 530
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CLE F + A ++C+ +A H GC L I G ++++
Sbjct: 531 HHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIATHRHGCCVLQRCITRSTGKHGEKLVA 590
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N L++ GNYV+Q+++ L+ P I ++ G+YV LS+ K S VV+KCLK
Sbjct: 591 EISANGLLLAQDDFGNYVIQYIIELKIPSAIASLMSQFEGNYVHLSMQKFSSHVVEKCLK 650
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + + I+ E L+ Q+ D + NYVIQ+AL T + +H L+ ++ H+
Sbjct: 651 HLEESRPRIVHEFLSVPHFEQLMQDPFANYVIQSALEVT----KGPLHASLIEAVRPHI- 705
Query: 313 ALRVMKYGSNVYKWT 327
LR Y ++ T
Sbjct: 706 ILRTSPYCKKIFSRT 720
>gi|299755883|ref|XP_001828946.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298411424|gb|EAU92953.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 982
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 158/322 (49%), Gaps = 28/322 (8%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ +L +DQ G +YLQ+ L G D +F ELM+ +G ++ K +E +
Sbjct: 564 EIATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFKHFAELMTDPFGNYLCQKLLEFATD 623
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH-------LPPLLYHVMSALKR 125
Q LI + Q + S++ G+ +V+K+I ++ + L HV+S +K
Sbjct: 624 DQRNLICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQIHSIILALSLHVVSLIKD 680
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L G+ VI +CL N FIY A +C+ +A H GC L ID+
Sbjct: 681 LN--------GNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASE 732
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
++R Q+++ I+ NA +L + GNYVVQ++L L D D + G+ LS+ K S
Sbjct: 733 AQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFLGNICALSVQKFSS 792
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR- 302
V++KC++ N +IEELLN ++ ++ D YGNY +QTAL D QR
Sbjct: 793 NVMEKCIRVAEHNTRKLVIEELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPGQRA 846
Query: 303 -LVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 847 LLVEGIRPVLPLIRNTPYGKRI 868
>gi|12324246|gb|AAG52093.1|AC012680_4 putative RNA-binding protein; 42664-44784 [Arabidopsis thaliana]
Length = 626
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 142/279 (50%), Gaps = 2/279 (0%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G S +F V ELM +G ++ K ++ C E
Sbjct: 338 VYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEE 397
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L T + + S++ +G+ V++L++ + + V AL+ F L+
Sbjct: 398 QRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISL-VKLALRPGFLDLIKD 456
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N FI+ AA + C +A H GC L I +R++++
Sbjct: 457 LNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIA 516
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
IS N+ L++ GNY VQ V+ L P + + L+GHYV LS+ K S +V++CL
Sbjct: 517 EISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLM 576
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAET 291
+ + I+ EL++ Q+ D Y N+VIQ ALA T
Sbjct: 577 HCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAAT 615
>gi|452822083|gb|EME29106.1| serine rich Pumilio family RNA binding domain protein [Galdieria
sulphuraria]
Length = 848
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 163/316 (51%), Gaps = 15/316 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+F LA+DQ G ++LQ L G+ + + ELM +G ++ K E CN
Sbjct: 531 IFELAKDQHGCRFLQMKLEEGNPAYIAMILAECFDGLPELMVDPFGNYLCQKLFECCNFQ 590
Query: 74 QLALIILKITFQDQLFLLA--SVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q I+ Q+ +LA S++ G+ V+++I+ + + V +AL LM
Sbjct: 591 QRLSIL-----QNTCSVLAQVSMNMHGTRVVQRIIECMEG-EDQISTVCTALTPFASQLM 644
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL+ N FI+ A + HC+ LA H GC + +D +++Q+
Sbjct: 645 KDVNGNHVIQRCLQKVAPTHNQFIFDAVVSHCVELATHRHGCCVIQRCLDYAIPLQKEQV 704
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
I NA +L + GNYVVQ+VL L++ F I I L GH +LS+ K S VV+KC
Sbjct: 705 CMEICENAFTLVQDAFGNYVVQYVLDLKNRFYIAKIIAQLAGHLYELSVQKFSSNVVEKC 764
Query: 252 LKY--QNAVHYIIEELLNSDQIL-QVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
L+ ++I EL++ ++L ++ +D YGNYV+Q AL + + +L ++ ++
Sbjct: 765 LQQVDPETRKHLIYELMSDRELLGRLLHDAYGNYVVQRAL-QLAQSPQL---EQFCEIIR 820
Query: 309 QHLAALRVMKYGSNVY 324
HL++L+ YG +Y
Sbjct: 821 PHLSSLKSTPYGKRIY 836
>gi|255555215|ref|XP_002518644.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
gi|223542025|gb|EEF43569.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
Length = 644
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 158/307 (51%), Gaps = 7/307 (2%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+DQ+G ++LQ+ + + +F V ++L+ Q+ ++ K +CN Q+
Sbjct: 320 VARDQDGCRFLQKKVEELIPEQTEMIFLEVKDHLYDLIVDQFANYLVQKLFLACNGVQIN 379
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++L + + + G+ +++K+I+++ + P ++SAL + +L G
Sbjct: 380 QLLLSLVQNGERLKNICIHMHGTRAMQKIIEIINNYPEQKASLVSALGNITVYLAKNHNG 439
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
VI QCL+ ++ + C+ +A + GC L +D+ G ++ + I+
Sbjct: 440 HHVIQQCLKCFEVEYTQYLLAEIAQSCIEIARDKSGCCVLQKALDSSYGELKECFITTIT 499
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
NA+ LS GNYVVQ+VL + P I LRG +V+LS+ K GS VV+KCLK N
Sbjct: 500 ANASVLSVDPYGNYVVQYVLQMHIPHAEATILEQLRGQFVNLSMDKFGSNVVEKCLKECN 559
Query: 257 AVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV----TKLQQH 310
++ I++EL +S IL+V +GNYV Q+AL E +D +R++ +L H
Sbjct: 560 EINAAGIVQELADSPSILRVLQHPFGNYVAQSAL-EVAPEDLYQYLERVIIFFERELHSH 618
Query: 311 LAALRVM 317
L +V+
Sbjct: 619 LHGKKVL 625
>gi|356510185|ref|XP_003523820.1| PREDICTED: uncharacterized protein LOC100784921 [Glycine max]
Length = 653
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 161/315 (51%), Gaps = 7/315 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+++LA+DQ G ++LQ + G + + +F + G ELM +G ++ K ++ C +
Sbjct: 341 IYNLAKDQNGCRFLQRMVDEGTYQDICIVFEGIIGNVVELMIDSFGNYLVQKLLDVCTDD 400
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
QL I+L +T + S++ G+ V+KLI+ + + V SA++ F L+
Sbjct: 401 QLLQIVLLLTNHPTQLVRISLNTHGTRVVQKLIETLTSDEQVSL-VKSAIQPGFLDLIKD 459
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N FI+ AA++ C+ +A H GC L I + G R +++
Sbjct: 460 LNGNHVIQRCLQCFSCQDNQFIFDAAVKFCVEIATHRHGCCVLQCCIHHSTGKNRDKLVT 519
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I + L++ GNYVVQ+V+ + P + + +G +V LS K S VV+KCLK
Sbjct: 520 EICKHGLLLAQDAFGNYVVQYVIESDTPAVSVKLLSQFKGSFVILSTQKFSSHVVEKCLK 579
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ N+ I+ EL + + Q+ D Y NYVI++AL T + +H L ++ H
Sbjct: 580 HIGNSRPRIVGELTSVPRFEQLLQDPYANYVIRSALLFT----KGPLHASLAEIVRAH-K 634
Query: 313 ALRVMKYGSNVYKWT 327
LR Y ++ +
Sbjct: 635 GLRTSPYCKRIFSGS 649
>gi|451846158|gb|EMD59469.1| hypothetical protein COCSADRAFT_259016 [Cochliobolus sativus
ND90Pr]
Length = 1004
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 159/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G ++LQ+ L ++ + +F + ELM+ +G ++ K +E CN+
Sbjct: 590 EIYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFCND 649
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q ++ + + ++ G+ +++K+I+ ++ ++ AL L+
Sbjct: 650 EQRNTLVRNAA---PAMVQIAFNQHGTRALQKMIEFIS-TDDQTQMIIRALSGQVVDLIQ 705
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL + FI+ A EHC+ + H GC L ID+ G ++ ++
Sbjct: 706 DLNGNHVIQKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKVDLI 765
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ L + GNYVVQ++L L D +C +G +LS K S V++KC+
Sbjct: 766 RKITAHSFHLVQDPFGNYVVQYILDLNDTSFTTPMCQGFQGKICELSKQKFSSNVIEKCI 825
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +IEELL+ +Q+ Q+ D YGNYVIQTAL L VH L+ ++
Sbjct: 826 RCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTAL--EFAPAELCVH--LIEAMRPI 881
Query: 311 LAALRVMKYGSNV 323
L ++R YG +
Sbjct: 882 LPSIRQTPYGRRI 894
>gi|392865282|gb|EAS31064.2| RNA-binding protein [Coccidioides immitis RS]
Length = 1023
Score = 127 bits (318), Expect = 8e-27, Method: Composition-based stats.
Identities = 83/313 (26%), Positives = 156/313 (49%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + +F ELM+ +G ++ K +E N+
Sbjct: 605 ELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSND 664
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 665 EQRTALINNAAPQ---LVSIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRDKVVDLVQ 720
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R Q++
Sbjct: 721 DLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLI 780
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ +L + GNYVVQ++L L +P + +C G LS K S V++KCL
Sbjct: 781 AQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCL 840
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +I+E+L +++ ++ D + NYV+QTA+ + R++ L+ ++
Sbjct: 841 RTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVA----LIEAVRPI 896
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 897 LPSIRQTPHGRRI 909
>gi|320040960|gb|EFW22893.1| RNA-binding protein [Coccidioides posadasii str. Silveira]
Length = 1023
Score = 127 bits (318), Expect = 8e-27, Method: Composition-based stats.
Identities = 83/313 (26%), Positives = 156/313 (49%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + +F ELM+ +G ++ K +E N+
Sbjct: 605 ELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSND 664
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 665 EQRTALINNAAPQ---LVSIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRDKVVDLVQ 720
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R Q++
Sbjct: 721 DLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLI 780
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ +L + GNYVVQ++L L +P + +C G LS K S V++KCL
Sbjct: 781 AQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCL 840
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +I+E+L +++ ++ D + NYV+QTA+ + R++ L+ ++
Sbjct: 841 RTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVA----LIEAVRPI 896
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 897 LPSIRQTPHGRRI 909
>gi|425771288|gb|EKV09735.1| hypothetical protein PDIP_63380 [Penicillium digitatum Pd1]
gi|425776819|gb|EKV15020.1| hypothetical protein PDIG_28960 [Penicillium digitatum PHI26]
Length = 1020
Score = 127 bits (318), Expect = 1e-26, Method: Composition-based stats.
Identities = 85/315 (26%), Positives = 161/315 (51%), Gaps = 14/315 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+SL +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 605 ELYSLCKDQHGCRYLQRKLEERNQEHVQLIFSETYMHVIELMTDPFGNYLCQKLLEYSND 664
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I + + ++++ G+ +++K+I+ ++ P V++AL+ L+
Sbjct: 665 EQRTALINNAAPE---LVKIALNQHGTRALQKMIEFIS-TPQQTQTVINALQYHVVDLVQ 720
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL +FIY+A +C+ + H GC L ID+ G ++ +++
Sbjct: 721 DLNGNHVIQKCLNRLSPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCIDHASGHQKARLI 780
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ +L + GNYVVQ++L L +P + +C G+ LS K S V++KCL
Sbjct: 781 SQITSHSFALVQDPFGNYVVQYILDLAEPSFTNPLCATFGGNIPQLSKQKFSSNVIEKCL 840
Query: 253 KYQNAVHY----IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
+ A +Y +I+E L +++ ++ D + NYV+QTA M L R+V ++
Sbjct: 841 R--TADNYMKREMIDEFLMGNELEKMLRDSFANYVVQTA----MDFCDLETRNRIVEAVR 894
Query: 309 QHLAALRVMKYGSNV 323
L ++R +G +
Sbjct: 895 PILPSIRQTPHGRRI 909
>gi|453088007|gb|EMF16048.1| ARM repeat-containing protein [Mycosphaerella populorum SO2202]
Length = 1055
Score = 127 bits (318), Expect = 1e-26, Method: Composition-based stats.
Identities = 79/288 (27%), Positives = 149/288 (51%), Gaps = 7/288 (2%)
Query: 3 TIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFV 62
+I E T ++++L +DQ G ++LQ L + + + +F V ELM +G ++
Sbjct: 622 SIKVEQLTG-EIYNLCKDQHGCRFLQRKLEERNEKTVQVIFDEVKEHMIELMVDPFGNYL 680
Query: 63 FGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSA 122
K +ES N++Q ++I + ++++ G+ +++K+I+ ++ P + ++ A
Sbjct: 681 CQKLLESANDNQRTILIENASPS---MTKIALNQHGTRALQKMIEYIS-TPEQIQLIVKA 736
Query: 123 LKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN 182
L L+ G+ VI +CL + FI++A HC+ + H GC L ID+
Sbjct: 737 LGNDVVVLIQDLNGNHVIQKCLNHLSSIDASFIFEAVGAHCITVGTHRHGCCVLQRCIDH 796
Query: 183 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
G ++ Q++ + NA +L + GNYVVQ++L L +P + +C A G LS K
Sbjct: 797 ADGLQKGQMVDHVIRNAYALVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEVPALSRQK 856
Query: 243 CGSFVVQKCLKYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
S V++KC++ + +I EL+ + ++ D + NYV+QTA+
Sbjct: 857 FSSNVIEKCIRCSSNETRRELIRELMVPQVLEKLLRDGFANYVVQTAM 904
>gi|336364324|gb|EGN92684.1| hypothetical protein SERLA73DRAFT_190697 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378294|gb|EGO19452.1| hypothetical protein SERLADRAFT_478869 [Serpula lacrymans var.
lacrymans S7.9]
Length = 597
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 157/322 (48%), Gaps = 20/322 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G +YLQ+ L G D +F +LM+ +G ++ K +E +
Sbjct: 127 EIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTD 186
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA-------HLPPLLYHVMSALKR 125
Q +I + Q + S++ G+ +V+K+I ++ ++ ++ AL
Sbjct: 187 EQRNVICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQTDVRYNTQIHSIIVALSL 243
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L+ G+ VI +CL N FIY A +C+ +A H GC L ID+
Sbjct: 244 HVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASD 303
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+R Q+++ I+ NA +L + GNYVVQ++L L D DA+ G+ LS+ K S
Sbjct: 304 HQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSS 363
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR- 302
V++KC++ + +IEELLN ++ ++ D YGNY +QTAL D QR
Sbjct: 364 NVIEKCIRVAEHSTRKILIEELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPAQRA 417
Query: 303 -LVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 418 LLVDGIRPVLPLIRNTPYGKRI 439
>gi|350638129|gb|EHA26485.1| hypothetical protein ASPNIDRAFT_55402 [Aspergillus niger ATCC 1015]
Length = 1507
Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 158/320 (49%), Gaps = 10/320 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 593 ELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSND 652
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ V+ +L+ L+
Sbjct: 653 EQRTDLINNAAHQ---LVKIALNQHGTRALQKMIEFIS-TAEQTQTVIHSLEDHVVELVQ 708
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G ++ +++
Sbjct: 709 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLI 768
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C RG+ LS K S V++KCL
Sbjct: 769 AQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCL 828
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +I+E+L ++ ++ D + NYV+QTA+ + R R+V ++
Sbjct: 829 RTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADAETR----ARIVDCIRPI 884
Query: 311 LAALRVMKYGSNVYKWTTAS 330
L ++R +G + AS
Sbjct: 885 LPSIRQTPHGRRIAGKMMAS 904
>gi|255538126|ref|XP_002510128.1| RNA binding protein, putative [Ricinus communis]
gi|223550829|gb|EEF52315.1| RNA binding protein, putative [Ricinus communis]
Length = 542
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 156/318 (49%), Gaps = 13/318 (4%)
Query: 18 AQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 77
A+DQ G + +++ L + +D + + ELM +G +V K +E C+E Q
Sbjct: 220 AKDQFGCKLVRKALENVTHEKIDMVLLEIIDSVAELMPHPFGNYVVQKLVEVCSEEQRTR 279
Query: 78 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL-------LYHVMSALKRLFKFL 130
I+L +T + + ++ G+ +V+KL++ +A + + +MSAL L
Sbjct: 280 ILLAVTKNEVQLVSICLNMHGTRAVQKLLEGIASTQQVSITARQQVSLIMSALSSGAVEL 339
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G VI CLE N ++ + ++C +A + GC L +D+ G R +
Sbjct: 340 AKDMNGHHVIKYCLEHFLPEDNKYLLKVVADNCFDIATDKSGCCVLQQCVDHSMGEPRDR 399
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I+ A L++ R GNYV+QH+L L +P + + L G++ LS K GS VV+K
Sbjct: 400 LVASITNIALRLAQDRYGNYVIQHLLGLRNPLITANLFRQLEGYFAVLSCDKFGSNVVEK 459
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CL A II ELL S + D YGN+VIQ+AL + + V ++ ++
Sbjct: 460 CLLESRAEQCTQIISELLRSPCSSMLLVDPYGNFVIQSAL----KVSKGLVQGAMLELIR 515
Query: 309 QHLAALRVMKYGSNVYKW 326
Q++ A+R YG + W
Sbjct: 516 QNIPAMRSSIYGRKLLAW 533
>gi|310798475|gb|EFQ33368.1| hypothetical protein GLRG_08647 [Glomerella graminicola M1.001]
Length = 802
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 155/312 (49%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 384 IYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 443
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + ++++ G+ +++K+I+ V P + +++AL+ L+
Sbjct: 444 ERTVLIQNAAAD---MVRIALNQHGTRALQKMIEFVT-TPTQIEMIINALRFQVVELIQD 499
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A HC+ + H GC L ID+ G ++ ++
Sbjct: 500 LNGNHVIQKCLNKLSAQDAQFIFDAVGTHCVDVGTHRHGCCVLQRCIDHASGDQKTWLIA 559
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + I + LS K S V++KCL+
Sbjct: 560 KITEHAPILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFQNRIGQLSRHKFSSNVIEKCLR 619
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ + I+EELL +I ++ D Y NYVIQTAL + RLV ++ L
Sbjct: 620 CSQEPSRDMIVEELLTPGEIERLLRDSYANYVIQTALEYATPHGKF----RLVDAIRPIL 675
Query: 312 AALRVMKYGSNV 323
++R YG +
Sbjct: 676 PSIRSTPYGRRI 687
>gi|58265692|ref|XP_570002.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109369|ref|XP_776799.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259479|gb|EAL22152.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226234|gb|AAW42695.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 948
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 157/317 (49%), Gaps = 15/317 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L SL +DQ G +YLQ+ L GD + D +F G ELM+ +G ++ K +E E
Sbjct: 450 ELLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTE 509
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHL--PPLLYHVMSALKRLFKFL 130
Q + II + + S++ G+ +V+K++ +A P + ++ AL L
Sbjct: 510 EQRSAIIDSVAND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVAL 566
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL N FIY A + + +A H GC L ID+ ++R Q
Sbjct: 567 IKDLNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQ 626
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I N+ L + GNYV+Q++L L D + + G+ LS+ K S VV+K
Sbjct: 627 LVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEK 686
Query: 251 CLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTK 306
C++ + ++ E+LN ++ ++ D YGNYVIQT L D + QR LV
Sbjct: 687 CIRVADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVEC 740
Query: 307 LQQHLAALRVMKYGSNV 323
++ L ++R YG +
Sbjct: 741 IRPILPSIRNTPYGKRI 757
>gi|402076055|gb|EJT71478.1| RNA-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1066
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 82/312 (26%), Positives = 159/312 (50%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CNE
Sbjct: 612 IYELCKDQHGCRYLQKQLENRQPEHVHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNEE 671
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + QD + + ++++ G+ +++K+I+ + + + ++ +L+ L+
Sbjct: 672 ERTVLIQNAS-QDMVRI--ALNQHGTRALQKMIEFI-NTDEQVQIIIESLRNRVVELIQD 727
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL ++ FI+ A + + + H GC L ID+ G ++ ++
Sbjct: 728 LNGNHVIQKCLNKLNCTQSQFIFDAVGKSAIDVGTHRHGCCVLQRCIDHASGDQKVWLIQ 787
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A +L + GNYVVQ+++ L +P + + RG LS K S V++KCL+
Sbjct: 788 RITEHAVALVQDPFGNYVVQYIIDLNEPSFTEPLVGMFRGRISALSRHKFSSNVIEKCLR 847
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ I EE+L +I ++ D + NYVIQTAL + + RLV ++ L
Sbjct: 848 CAQDGSKDMIAEEILAPGEIERLLRDSFANYVIQTALEYSTHYTK----HRLVDAIRPIL 903
Query: 312 AALRVMKYGSNV 323
+R YG +
Sbjct: 904 PNIRATPYGRRI 915
>gi|290985728|ref|XP_002675577.1| predicted protein [Naegleria gruberi]
gi|284089174|gb|EFC42833.1| predicted protein [Naegleria gruberi]
Length = 737
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 148/278 (53%), Gaps = 7/278 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ LA+DQ G ++LQ+ ++ G+ + L +F + ELM+ +G ++ K +E C
Sbjct: 412 VYKLAKDQYGCRFLQKKITDGE-QGLQMVFDEIYDHIVELMTDPFGNYLCQKLVEHCTNE 470
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
LII ++ + + S++ G+ +V+KLI+ + + ++ ALK L+
Sbjct: 471 HKTLIIRAVS---KDLINISMNMHGTRAVQKLIECLTTQD-QIGEIIEALKDSVVPLIKD 526
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ FIY A C+ +A H+ GC L ID+ S+R ++
Sbjct: 527 LNGNHVIQRCLQQLIPENKQFIYNAVAGRCVEVATHKHGCCVLQRCIDHAAESQRMMLIK 586
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ NA +L ++ GNYVVQ+VL L D + + I G LS+ K S V++KCL+
Sbjct: 587 EVIANAHTLIQNPFGNYVVQYVLDLGDDSINEKIIARFYGSIASLSINKFSSNVIEKCLR 646
Query: 254 Y--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALA 289
+N + +IEE+L + + D +GNYV+QTA++
Sbjct: 647 IGNENVKNTMIEEVLEDRNLSALLQDSFGNYVVQTAIS 684
>gi|409083297|gb|EKM83654.1| hypothetical protein AGABI1DRAFT_88582 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 979
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 158/315 (50%), Gaps = 14/315 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ +L +DQ G +YLQ+ L G D +F ELM+ +G ++ K +E +
Sbjct: 539 EIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNYLCQKLLEFATD 598
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q LI + Q + S++ G+ +V+K+I ++ ++ ++ AL L+
Sbjct: 599 EQRNLICESVA---QELVNISLNMHGTRAVQKMIDFLSTRR-QIHSIILALSLHVVALIK 654
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL N FIY A +C+ +A H GC L ID+ +R Q++
Sbjct: 655 DLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRIQLV 714
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ I+ NA +L + GNYVVQ++L L D DA+ +G+ LS+ K S V++KC+
Sbjct: 715 NEITYNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQKFSSNVIEKCV 774
Query: 253 KY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTKLQ 308
+ + +I+ELLN ++ ++ D YGNY +QTAL D QR LV ++
Sbjct: 775 RVAEHSTRKLLIDELLNRSRLEKLLRDSYGNYCVQTAL------DYAEPAQRALLVEGIR 828
Query: 309 QHLAALRVMKYGSNV 323
L +R YG +
Sbjct: 829 PVLPLIRNTPYGKRI 843
>gi|426201649|gb|EKV51572.1| hypothetical protein AGABI2DRAFT_114299 [Agaricus bisporus var.
bisporus H97]
Length = 975
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 158/315 (50%), Gaps = 14/315 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ +L +DQ G +YLQ+ L G D +F ELM+ +G ++ K +E +
Sbjct: 535 EIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNYLCQKLLEFATD 594
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q LI + Q + S++ G+ +V+K+I ++ ++ ++ AL L+
Sbjct: 595 EQRNLICESVA---QELVNISLNMHGTRAVQKMIDFLSTRR-QIHSIILALSLHVVALIK 650
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL N FIY A +C+ +A H GC L ID+ +R Q++
Sbjct: 651 DLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRIQLV 710
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ I+ NA +L + GNYVVQ++L L D DA+ +G+ LS+ K S V++KC+
Sbjct: 711 NEITYNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQKFSSNVIEKCV 770
Query: 253 KY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTKLQ 308
+ + +I+ELLN ++ ++ D YGNY +QTAL D QR LV ++
Sbjct: 771 RVAEHSTRKLLIDELLNRSRLEKLLRDSYGNYCVQTAL------DYAEPAQRALLVEGIR 824
Query: 309 QHLAALRVMKYGSNV 323
L +R YG +
Sbjct: 825 PVLPLIRNTPYGKRI 839
>gi|405119110|gb|AFR93883.1| pumilio-family RNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 981
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 157/317 (49%), Gaps = 15/317 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L SL +DQ G +YLQ+ L GD + D +F G ELM+ +G ++ K +E E
Sbjct: 450 ELLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTE 509
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHL--PPLLYHVMSALKRLFKFL 130
Q + II + + S++ G+ +V+K++ +A P + ++ AL L
Sbjct: 510 EQRSAIIDSVAND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVAL 566
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL N FIY A + + +A H GC L ID+ ++R Q
Sbjct: 567 IKDLNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQ 626
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I N+ L + GNYV+Q++L L D + + G+ LS+ K S VV+K
Sbjct: 627 LVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEK 686
Query: 251 CLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTK 306
C++ + ++ E+LN ++ ++ D YGNYVIQT L D + QR LV
Sbjct: 687 CIRVADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVEC 740
Query: 307 LQQHLAALRVMKYGSNV 323
++ L ++R YG +
Sbjct: 741 IRPILPSIRNTPYGKRI 757
>gi|255950610|ref|XP_002566072.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593089|emb|CAP99465.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1018
Score = 125 bits (314), Expect = 3e-26, Method: Composition-based stats.
Identities = 83/320 (25%), Positives = 159/320 (49%), Gaps = 24/320 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+SL +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 603 ELYSLCKDQHGCRYLQRKLEERNPEHVQLIFSETYMHVIELMTDPFGNYLCQKLLEYSND 662
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH-------LPPLLYHVMSALKR 125
Q +I + + ++++ G+ +++K+I+ ++ + L YHV+ ++
Sbjct: 663 EQRTALIDNAAPE---LVKIALNQHGTRALQKMIEFISTSKQTQTVINALQYHVVDLVQD 719
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L G+ VI +CL +FIY+A +C+ + H GC L ID+ G
Sbjct: 720 L--------NGNHVIQKCLNRLTPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCIDHASG 771
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
++ +++ I+ ++ +L + GNYVVQ++L L +P + +C G+ LS K S
Sbjct: 772 HQKARLISQITSHSFALVQDPFGNYVVQYILDLAEPSFTNPLCSTFAGNIPQLSKQKFSS 831
Query: 246 FVVQKCLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
V++KCL+ + +I+E L +++ ++ D + NYV+QTA M L R+
Sbjct: 832 NVIEKCLRTADNYMKRQMIDEFLAGNELEKMLRDSFANYVVQTA----MDFCDLETRNRI 887
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V ++ L ++R +G +
Sbjct: 888 VEAVRPILPSIRQTPHGRRI 907
>gi|326496705|dbj|BAJ98379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ L G R +D +F V+ +LM +G ++ K + C+E
Sbjct: 171 MYHVARDQHGCRFLQQRLDDG-KREVDFIFTGVARHAVDLMVNPFGNYLMQKLLAVCSEE 229
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L +T + + + S++ G+ +V+KLI+ + + V++AL+ F L+
Sbjct: 230 QRMGIVLTLTKEPFVLVRISLNVHGTRAVQKLIESLKAREEIQL-VVAALRPGFLELIKD 288
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ N I+ AA +CL + GC L I G +++++
Sbjct: 289 PNGNHVVQKCLQSFGADDNKPIFDAAAIYCLDIGMQCHGCCVLQRCIARSTGEHKEKLVA 348
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ N L++ GNYVVQ+V+ L+ ++ G Y+ LS+ K S VV+KCLK
Sbjct: 349 AIARNGFELAQDAYGNYVVQYVIELKVAAANASLAQQFEGKYIHLSMQKFSSNVVEKCLK 408
Query: 254 -YQNAVHY-IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
++ A II +LL + Q ++ Y NYV+ AL + + S+H L ++ H+
Sbjct: 409 VFKEADKANIILQLLAAPQFERLLLHPYANYVVYAAL----QNSKGSLHSALTNAIRPHV 464
Query: 312 AALRVMKYGSNVY 324
LR Y +Y
Sbjct: 465 ELLRTSPYCKRIY 477
>gi|321254126|ref|XP_003192973.1| RNA-binding protein of the pumilio family [Cryptococcus gattii
WM276]
gi|317459442|gb|ADV21186.1| RNA-binding protein of the pumilio family, putative [Cryptococcus
gattii WM276]
Length = 950
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 157/317 (49%), Gaps = 15/317 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L SL +DQ G +YLQ+ L GD + D +F G ELM+ +G ++ K +E E
Sbjct: 451 ELLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTE 510
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHL--PPLLYHVMSALKRLFKFL 130
Q + II + + S++ G+ +V+K++ +A P + ++ AL L
Sbjct: 511 EQRSAIIDSVAND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVAL 567
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL N FIY A + + +A H GC L ID+ ++R Q
Sbjct: 568 IKDLNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQ 627
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I N+ L + GNYV+Q++L L D + + G+ LS+ K S VV+K
Sbjct: 628 LVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEK 687
Query: 251 CLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTK 306
C++ + ++ E+LN ++ ++ D YGNYVIQT L D + QR LV
Sbjct: 688 CIRVADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVEC 741
Query: 307 LQQHLAALRVMKYGSNV 323
++ L ++R YG +
Sbjct: 742 IRPILPSIRNTPYGKRI 758
>gi|353234716|emb|CCA66738.1| related to Drosophila pumilio protein and Mpt5p protein
[Piriformospora indica DSM 11827]
Length = 980
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 156/318 (49%), Gaps = 28/318 (8%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+ +DQ G ++LQ+ L G D +F ELM+ +G ++ K +E + Q
Sbjct: 529 MCKDQHGCRFLQKKLEEGVPEHRDIIFRETFKHFAELMTDPFGNYLCQKLLEYSTDEQRN 588
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLI-------KVVAHLPPLLYHVMSALKRLFKF 129
LI + + S++ G+ +V+K+I ++VA + L HV++ +K L
Sbjct: 589 LICESVAGD---LVTISLNMHGTRAVQKMIDFLSTQRQIVAIIRALSLHVVTLIKDLN-- 643
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
G+ VI +CL N FIY A HC+ +A H GC L ID+ ++R
Sbjct: 644 ------GNHVIQKCLNRLVPEDNQFIYNAVATHCVEVATHRHGCCVLQRCIDHASETQRL 697
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
Q++ I+ +A +L + GNYVVQ++L L D DA+ G+ LS+ K S V++
Sbjct: 698 QLVTEITYHALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFFGNVCALSVQKFSSNVIE 757
Query: 250 KCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVT 305
KC++ N +IEELLN ++ ++ D +GNY +QTAL D QR LV
Sbjct: 758 KCIRVAEHNTRKLLIEELLNRSRLEKLLRDSFGNYCVQTAL------DYAEPGQRMLLVE 811
Query: 306 KLQQHLAALRVMKYGSNV 323
++ L +R YG +
Sbjct: 812 GIRPILPLIRNTPYGKRI 829
>gi|302923594|ref|XP_003053709.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
gi|256734650|gb|EEU47996.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
Length = 829
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 165/320 (51%), Gaps = 14/320 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L ++ + ++ + ELM+ +G ++ K +E CN+
Sbjct: 365 IYDLCKDQHGCRYLQKKLEERNAEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 424
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + QD + + ++++ G+ +++K+I+ V+ P ++ ++ AL+ L+
Sbjct: 425 ERTVLIQNAS-QDMVRI--ALNQHGTRALQKMIEYVS-TPQQVHLIIEALRFRVVELIQD 480
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A +C+ + H GC L ID+ G ++ ++
Sbjct: 481 LNGNHVIQKCLNKLTAPDAQFIFDAVGHNCIEVGTHRHGCCVLQRCIDHASGDQKLWLIQ 540
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + I +G LS K S V++KCL+
Sbjct: 541 RITEHARVLVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCISQLSRHKFSSNVIEKCLR 600
Query: 254 YQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTKLQQ 309
A I+EELL ++ ++ D + NYVIQTAL + + HQ+ LV ++
Sbjct: 601 CAQAPSKDMIVEELLGPQEMERLLRDSFANYVIQTAL------EYATPHQKYQLVESIRP 654
Query: 310 HLAALRVMKYGSNVYKWTTA 329
L +R YG + +A
Sbjct: 655 ILPQIRTTPYGRRIQAKISA 674
>gi|121703235|ref|XP_001269882.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119398025|gb|EAW08456.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 1002
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 158/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+SL +DQ G +YLQ L D + +F ELM+ +G ++ K +E N+
Sbjct: 589 ELYSLCKDQHGCRYLQRKLEERDPEHVQLIFDETHLHVVELMTDPFGNYLCQKLLEYSND 648
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ V+ AL+ L+
Sbjct: 649 DQRTALINNAAHQ---LVKIALNQHGTRALQKMIEFISTAE-QTQTVIQALRDHVVELVQ 704
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G +R +++
Sbjct: 705 DLNGNHVIQKCLNRLSAEDAQFIYDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLI 764
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C + RG+ LS K S V++KCL
Sbjct: 765 AQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQSFRGNIPALSKQKFSSNVIEKCL 824
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +I+E+L ++ ++ D + NYV+QTA+ + R R+V ++
Sbjct: 825 RTADFQIKRQMIDEMLVGVELEKMLRDSFANYVVQTAMDFADPETR----GRIVDAIRPI 880
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 881 LPSIRQTPHGRRI 893
>gi|327300785|ref|XP_003235085.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326462437|gb|EGD87890.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 1049
Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ + +DQ G +YLQ L G + +F ELM+ +G ++ K +E N+
Sbjct: 627 EIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTND 686
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I + ++++ G+ +++K+I+ ++ P + V+ AL L+
Sbjct: 687 EQRTGLI---NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQ 742
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A + C+ + H GC L ID+ G +R +++
Sbjct: 743 DLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLI 802
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ SL + GNYV+Q++L L +P +C +G LS K S V++KC+
Sbjct: 803 EQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCI 862
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ N I+E+L+ ++ + D + NYVIQTA+ + R L+ ++
Sbjct: 863 RTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPESR----NTLIEAVRPL 918
Query: 311 LAALRVMKYGSNV 323
L +R +G +
Sbjct: 919 LPGIRSQPHGRRI 931
>gi|302505595|ref|XP_003014504.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
gi|291178325|gb|EFE34115.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
Length = 1094
Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ + +DQ G +YLQ L G + +F ELM+ +G ++ K +E N+
Sbjct: 672 EIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTND 731
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I + ++++ G+ +++K+I+ ++ P + V+ AL L+
Sbjct: 732 EQRTGLI---NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQ 787
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A + C+ + H GC L ID+ G +R +++
Sbjct: 788 DLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLI 847
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ SL + GNYV+Q++L L +P +C +G LS K S V++KC+
Sbjct: 848 EQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCI 907
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ N I+E+L+ ++ + D + NYVIQTA+ + R L+ ++
Sbjct: 908 RTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPESR----NTLIEAVRPL 963
Query: 311 LAALRVMKYGSNV 323
L +R +G +
Sbjct: 964 LPGIRSQPHGRRI 976
>gi|224067236|ref|XP_002302423.1| predicted protein [Populus trichocarpa]
gi|222844149|gb|EEE81696.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 143/278 (51%), Gaps = 3/278 (1%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +LA+DQ G ++LQ + S +D LF+ V + L++ +G +V K IE +E
Sbjct: 189 IVALAKDQHGCKFLQRLIESATREQIDMLFYEVIDYVGGLIADPFGNYVVQKLIEVISEE 248
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++ +T D + +D G+ +V+KL+ + + P + V+SAL + L+
Sbjct: 249 QRTRVLRMLTRTDFQLVRICLDVHGTRAVQKLLNCITN-PLQVSLVVSALNQGAVALIKD 307
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G VI ++ N +I + E C +A ++ GC L ++ +G R +++
Sbjct: 308 SNGHHVIQHSMKHFSPQDNKYILKQVAEKCFEIATNKSGCCVLQRCVEYSEGEHRDRLVA 367
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL- 252
I NA L+ GNYVVQH+L L+ P + + + G Y+ LS K GS VV+KCL
Sbjct: 368 EIIANALLLAEDHYGNYVVQHILDLKMPQITENLLTQFEGSYMALSCNKYGSNVVEKCLL 427
Query: 253 -KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALA 289
++ II ELL++ + D +GN+VIQ AL+
Sbjct: 428 TTSEDQSTQIILELLSNPGASMLLVDPFGNFVIQKALS 465
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 46/287 (16%)
Query: 40 DKLFWV-VSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFG 98
D + W +SG L Q+G + IES Q+ ++ ++ D + L + D FG
Sbjct: 178 DYVSWEDLSGKIVALAKDQHGCKFLQRLIESATREQIDMLFYEVI--DYVGGLIA-DPFG 234
Query: 99 SSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQA 158
+ V+KLI+V+ S +R M+T+ ++ CL D
Sbjct: 235 NYVVQKLIEVI-----------SEEQRTRVLRMLTRTDFQLVRICL--------DVHGTR 275
Query: 159 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSL 218
A++ L CI + ++ ++ A +L + +G++V+QH +
Sbjct: 276 AVQKLL-------NCI--------TNPLQVSLVVSALNQGAVALIKDSNGHHVIQHSMKH 320
Query: 219 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQILQVAN 276
P I + +++ K G V+Q+C++Y H ++ E++ + L +A
Sbjct: 321 FSPQDNKYILKQVAEKCFEIATNKSGCCVLQRCVEYSEGEHRDRLVAEIIAN--ALLLAE 378
Query: 277 DKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D YGNYV+Q L M Q + + L+T+ + AL KYGSNV
Sbjct: 379 DHYGNYVVQHILDLKMPQ----ITENLLTQFEGSYMALSCNKYGSNV 421
>gi|124506293|ref|XP_001351744.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23504673|emb|CAD51551.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|24849849|gb|AAM28242.1| RNA-binding protein Puf1 [Plasmodium falciparum]
Length = 1894
Score = 124 bits (312), Expect = 5e-26, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 167/326 (51%), Gaps = 12/326 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ +A+DQ G + LQ L + + +++++ ELM +G ++ K +E C
Sbjct: 827 NICKIAKDQTGCRILQRILEKKNPKHIEEIYNEALDHIIELMVDPFGNYLCQKLMEVCTS 886
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q+ II K + DQL + AS+ G+ +V+KLI+++ P + ALK L+
Sbjct: 887 EQIEKIIDKSS--DQL-INASISVHGTRTVQKLIEMIK-TPSQIKKTTKALKNSIITLIK 942
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ V+ +CL +H+ DFIY+A L +C+ ++ H GC + ID+ ++++ +
Sbjct: 943 DINGNHVVQKCLITLTSHQCDFIYEAILNNCVEVSTHRHGCCVIQRCIDSANEAQKELFI 1002
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
IS NA L + GNYVVQ++L+L + + I L + +L++ K S VV+KCL
Sbjct: 1003 RNISNNALDLVQDAFGNYVVQYILNLGNEKVNLEIANKLLPNIEELAVQKFSSNVVEKCL 1062
Query: 253 KYQN--AVHYIIEELLNSDQ--ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
N II E+L D+ + Q+ D +GNYVIQ AL+ + +LV ++
Sbjct: 1063 IIGNNKCRKLIINEILKKDKDILKQIILDPFGNYVIQRALSVASEPEL----TKLVEGIK 1118
Query: 309 QHLAALRVMKYGSNVYKWTTASHPCL 334
++ LR + G + HP L
Sbjct: 1119 PYIKELRNISSGKRIAWKLAKKHPLL 1144
>gi|293332512|ref|NP_001169625.1| uncharacterized protein LOC100383506 [Zea mays]
gi|224030501|gb|ACN34326.1| unknown [Zea mays]
gi|414865276|tpg|DAA43833.1| TPA: hypothetical protein ZEAMMB73_925464 [Zea mays]
Length = 694
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 156/324 (48%), Gaps = 26/324 (8%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
+ +A+D+ G +YLQ+ G + D +F + +LM G ++ + +E C+E Q
Sbjct: 381 YHMAKDKNGCRYLQDKFLEGKHHV-DAIFEGIINHIADLMISSAGNYLVQEMVEVCDEGQ 439
Query: 75 LALIILKITFQDQLFLLA-SVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
IIL +T QD + ++A S++ G+ V++LI+ V L+ ++SAL+ F L+
Sbjct: 440 RLRIILALT-QDPVKMIAISLNTHGTRVVQRLIEKVTSRE-LIILIISALQPGFMLLVND 497
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL N FI++ A + +A GC L I +G + ++
Sbjct: 498 PNGTHVIQKCLANFGAEDNKFIFEGAAANYFNMAVQRHGCCVLQKCISTARGRYQANLIV 557
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I + L++ GNYVVQHVL + P+ + G Y+ LS K S VVQ+C++
Sbjct: 558 KICAHGFELAQDIFGNYVVQHVLKQKIPYANARLASLFEGKYIYLSKQKVSSNVVQRCIE 617
Query: 254 Y--QNAVHYIIEE--LLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ +A I+ E LL Q+ D Y NYVI TAL T R + LV ++
Sbjct: 618 FFPDDAKAVIVHEFLLLRGSHFEQLVTDPYANYVINTALNNT----RGHLLNALVEAIRP 673
Query: 310 HLAALRVMKYGSNVYKWTTASHPC 333
H A+R +HPC
Sbjct: 674 HEDAIR--------------THPC 683
>gi|326479871|gb|EGE03881.1| RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 1049
Score = 124 bits (311), Expect = 6e-26, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ + +DQ G +YLQ L G + +F ELM+ +G ++ K +E N+
Sbjct: 627 EIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNYLCQKLLEFTND 686
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I + ++++ G+ +++K+I+ ++ P + V+ AL L+
Sbjct: 687 EQRTGLI---NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQ 742
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A + C+ + H GC L ID+ G +R +++
Sbjct: 743 DLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLI 802
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ SL + GNYV+Q++L L +P +C +G LS K S V++KC+
Sbjct: 803 EQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCI 862
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ N I+E+L+ ++ + D + NYVIQTA+ + R L+ ++
Sbjct: 863 RTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPESR----NTLIEAVRPL 918
Query: 311 LAALRVMKYGSNV 323
L +R +G +
Sbjct: 919 LPGIRSQPHGRRI 931
>gi|326468643|gb|EGD92652.1| RNA-binding protein [Trichophyton tonsurans CBS 112818]
Length = 1049
Score = 124 bits (311), Expect = 6e-26, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ + +DQ G +YLQ L G + +F ELM+ +G ++ K +E N+
Sbjct: 627 EIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNYLCQKLLEFTND 686
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I + ++++ G+ +++K+I+ ++ P + V+ AL L+
Sbjct: 687 EQRTGLI---NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQ 742
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A + C+ + H GC L ID+ G +R +++
Sbjct: 743 DLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLI 802
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ SL + GNYV+Q++L L +P +C +G LS K S V++KC+
Sbjct: 803 EQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCI 862
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ N I+E+L+ ++ + D + NYVIQTA+ + R L+ ++
Sbjct: 863 RTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPESR----NTLIEAVRPL 918
Query: 311 LAALRVMKYGSNV 323
L +R +G +
Sbjct: 919 LPGIRSQPHGRRI 931
>gi|260947166|ref|XP_002617880.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
gi|238847752|gb|EEQ37216.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
Length = 707
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 163/335 (48%), Gaps = 42/335 (12%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG-------DSRILDKLFWVVSGFT------FELMSGQYG 59
D++SL +DQ G ++LQ L G +S +L F ELM+ +G
Sbjct: 383 DIYSLCKDQHGCRFLQRQLDLGMEAKRSEESGVLSNEVAATMIFNEIYMKIVELMTDPFG 442
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIK----------VV 109
++ K E+ + Q LI++K +L +A +D G+ +++KL++ ++
Sbjct: 443 NYLIQKLFENVSADQR-LILVK-NAAPELIRIA-LDPHGTRALQKLVECIDTKEESQLII 499
Query: 110 AHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACH 169
L P H++ + L G+ V+ +CL+ N FI+ AA EHC+ +A H
Sbjct: 500 NSLSP---HIVPLSRDLN--------GNHVVQKCLQELKAEDNQFIFDAASEHCIEIATH 548
Query: 170 EQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
GC L +D+ S+RKQ+ ++ NA LS GNYVVQ+VLS D I +
Sbjct: 549 RHGCCVLQRCLDHGNSSQRKQLSLKVAENATKLSLDPFGNYVVQYVLSRGDEESITIVLN 608
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL-NSDQILQVANDKYGNYVIQTAL 288
+R + + LSL K GS V++K L+ + +I LL NSD+ + ND +GNYV+QT+L
Sbjct: 609 HIRANVISLSLHKFGSNVIEKSLRINKLTNEVIAVLLENSDKFSMLLNDAFGNYVLQTSL 668
Query: 289 AETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D +L LQ L ++ +G +
Sbjct: 669 DVASASDLA----KLAQSLQPLLPNIKNTPHGRRI 699
>gi|356550783|ref|XP_003543763.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 623
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 158/312 (50%), Gaps = 7/312 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ LA+DQ G ++LQ + G S + LF V ELM +G ++ K ++ C E
Sbjct: 311 IYYLAKDQNGCRFLQRMIDEGTSEDVLVLFNGVIDDVVELMIDPFGNYLVQKLLDVCGED 370
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++ +T + + S++ G+ V+KLI V + + SA++ F L+
Sbjct: 371 ERLQVVSMLTEEPGQLVKTSLNLHGTRVVQKLITTVDSRKQIAM-LRSAIQSGFLALIKD 429
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N+FI+ AA + C+ +A H+ GC L ID G + ++
Sbjct: 430 LNGNHVIQRCLQYFSCKDNEFIFYAATKFCVEIATHQHGCCVLQRCIDYSTGKYKDMLVK 489
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I + L++ GNYVVQ+++ +E+P + +G+Y +LS+ K S VV+KCL
Sbjct: 490 EICRHGHLLAQDPFGNYVVQYIIEMENPSASLKLHSQFKGNYANLSMQKFSSHVVEKCLV 549
Query: 254 YQNAVH-YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + I++EL + + ++ D Y NYV+Q AL T + S+H L ++ +
Sbjct: 550 HIVEIRSRIVQELSSFPHLERLLQDPYANYVVQRALGVT----KGSLHASLAEAVRPY-K 604
Query: 313 ALRVMKYGSNVY 324
LR Y ++
Sbjct: 605 TLRSSPYCKRIF 616
>gi|344231266|gb|EGV63148.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 387
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 165/336 (49%), Gaps = 43/336 (12%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGD--------SRILDKLFWVVSGFT------FELMSGQY 58
++FSL +DQ G ++LQ L G + IL F ELM +
Sbjct: 61 EIFSLCKDQHGCRFLQRQLDLGKDIENKQNANNILSSDIAATMIFNEIYLKIIELMIDPF 120
Query: 59 GRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIK----------V 108
G ++ K E+ + Q +I++K D F+ ++D G+ +++KL++ +
Sbjct: 121 GNYLIQKLFENVSVDQ-RIILVKNAAPD--FIRIALDPHGTRALQKLVECISTEAECKLI 177
Query: 109 VAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLAC 168
+ +L P H++S + L G+ V+ +CL+ + +N FI+ A HC +A
Sbjct: 178 IDNLSP---HIVSLSRDL--------NGNHVVQKCLQKLSSKQNQFIFDTASSHCNDIAT 226
Query: 169 HEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAIC 228
H GC L +D ++RKQ+ I+ NA +LS GNYVVQ+VLS D + I
Sbjct: 227 HRHGCCVLQRCLDYGNAAQRKQLSSKIAENATNLSLDPFGNYVVQYVLSRGDEQSVAIIL 286
Query: 229 FALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL-NSDQILQVANDKYGNYVIQTA 287
++ H + LSL K GS V++K L+ + +++ LL N+D + ND +GNYV+QT+
Sbjct: 287 NHIKSHLIVLSLHKFGSNVIEKSLRISKLTNGLVQALLMNADHFQDLLNDPFGNYVLQTS 346
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L + D + +L + LQ L ++ +G +
Sbjct: 347 LDVATKADLV----KLSSALQPLLPNVKNTPHGRRI 378
>gi|452986016|gb|EME85772.1| hypothetical protein MYCFIDRAFT_150818 [Pseudocercospora fijiensis
CIRAD86]
Length = 519
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 144/279 (51%), Gaps = 8/279 (2%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ L +DQ G ++LQ L + + + +F V ELM +G ++ K +ES N+
Sbjct: 89 EIYGLCKDQHGCRFLQRKLEERNEQTVKTIFEEVKDHMIELMVDPFGNYLCQKLLESVND 148
Query: 73 SQ-LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q ALI+ +++ L ++ G+ +++K+I+ + P ++ AL+ L+
Sbjct: 149 EQRTALIVNAAPAMNKIAL----NQHGTRALQKMIEYIT-TPEQTQEIIKALRNDVVLLI 203
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL + FI++A +C+ + H GC L ID+ G ++ ++
Sbjct: 204 QDLNGNHVIQKCLNHLSSIDATFIFEAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEM 263
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + NA SL + GNYVVQ++L L +P + +C A G LS K S V++KC
Sbjct: 264 VDHVIANAYSLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIPALSRQKFSSNVIEKC 323
Query: 252 LKYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
++ + I+ E++ + ++ D + NYV+QTA+
Sbjct: 324 IRCASVETRREIVREIMPPQTLEKLLRDGFANYVVQTAM 362
>gi|452845425|gb|EME47358.1| hypothetical protein DOTSEDRAFT_69329 [Dothistroma septosporum
NZE10]
Length = 1038
Score = 122 bits (305), Expect = 3e-25, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 145/278 (52%), Gaps = 6/278 (2%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++++L +DQ G ++LQ L + + + +F V+ +LM +G ++ K +ES N+
Sbjct: 607 EIYTLCKDQHGCRFLQRKLEERNEKTVQIIFEEVNTHMVDLMVDPFGNYLCQKLLESTND 666
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q ++I ++++ G+ +++K+I+ ++ P ++ AL+ L+
Sbjct: 667 DQRTVLIQN---AKPAMTKIALNQHGTRALQKMIEYIS-TPEQTALIIDALRNDVVLLIQ 722
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL + FI+ A +C+ + H GC L ID+ G ++ +++
Sbjct: 723 DLNGNHVIQKCLNHLSSIDAAFIFHAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEMV 782
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ NA +L + GNYVVQ++L L +P + +C A G LS K S V++KC+
Sbjct: 783 DHVIRNAYALVQDPFGNYVVQYILDLSEPCFTEPLCQAFFGEIPALSRQKFSSNVIEKCI 842
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
+ + +++E++ + + ++ D + NYV+QTA+
Sbjct: 843 RCSSETTKRSLVQEIMPTQVLEKLLRDGFANYVVQTAM 880
>gi|429329361|gb|AFZ81120.1| pumilio-family RNA binding repeat domain-containing protein
[Babesia equi]
Length = 798
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 157/326 (48%), Gaps = 13/326 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ ++AQDQ G + LQ L D + + V LM+ +G ++ K + C+
Sbjct: 328 NVLTIAQDQTGCRMLQRQLEYNDENFIASILDEVIDHLVVLMTDPFGNYLCQKLMTVCSS 387
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
QL II + ++ FL ++ G+ +++KLI+VV P + V S L L+
Sbjct: 388 EQLGRIIKGV---EKDFLSICLNMHGTRAIQKLIEVVTE-PEHISFVTSVLSTAVVDLVN 443
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL + +FIY+A ++C+YLA H GC + ID +R ++
Sbjct: 444 DLNGNHVIQKCLISLKSEDCEFIYKAMNDNCVYLATHRHGCCVMQRCIDAANPQQRNMLI 503
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
IS L GNYV+Q+VL L+D + I AL + + + K S VV++CL
Sbjct: 504 DTISSKTLDLVEDAFGNYVIQYVLRLKDDEINRRIVVALADNVTEFAKQKFSSNVVERCL 563
Query: 253 KY--QNAVHYIIEELLNS--DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
+ +I + LN D + ++ D +GNYVIQ L + D LS L+ ++Q
Sbjct: 564 IFCPLEVRSILISKFLNVPFDVLKELILDPFGNYVIQRVL-NVAQSDELSA---LLDRIQ 619
Query: 309 QHLAALRVMKYGSNV-YKWTTASHPC 333
HL L+V G + K T + C
Sbjct: 620 PHLEELKVASSGKRIAAKITKRQYTC 645
>gi|357152596|ref|XP_003576172.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
[Brachypodium distachyon]
Length = 506
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 158/313 (50%), Gaps = 8/313 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ L G R +D +F V+ +LM +G ++ K + C+
Sbjct: 193 MYHVARDQHGCRFLQQRLDDG-KREVDFVFAGVARHAVDLMVNPFGNYLMQKLLAVCDRE 251
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++ +T + + S++ G+ +V+KLI+ + + V++AL+ F L+
Sbjct: 252 QRMALVRALTKDPFVLVRISLNVHGTRAVQKLIESLRTREEIQL-VVAALRPGFLELIKD 310
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ N I+ AA +CL + GC L I G +++++
Sbjct: 311 PNGNHVVQKCLQAFEADDNKPIFAAAAIYCLDIGMQCHGCCVLQRCIARSTGEHKEKLVA 370
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ N L++ GNYVVQ+V+ L+ ++ G Y+ LS+ K S VV+KCLK
Sbjct: 371 AIARNGFELAQDAYGNYVVQYVIELKVATANASLAQQFEGKYIHLSMQKFSSNVVEKCLK 430
Query: 254 -YQNAVH-YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
++ A II ELL + ++ Y NYV+ +AL + + S+H L ++ H+
Sbjct: 431 VFKEADKATIILELLAAPHFERLLQHPYANYVVYSAL----QNSKGSLHSALTNAIRPHV 486
Query: 312 AALRVMKYGSNVY 324
LR Y +Y
Sbjct: 487 ELLRTSPYCKRIY 499
>gi|15242461|ref|NP_196523.1| pumilio 21 [Arabidopsis thaliana]
gi|75264321|sp|Q9LXC5.1|PUM21_ARATH RecName: Full=Putative pumilio homolog 21; Short=APUM-21;
Short=AtPUM21
gi|7671428|emb|CAB89369.1| putative protein [Arabidopsis thaliana]
gi|9758989|dbj|BAB09516.1| unnamed protein product [Arabidopsis thaliana]
gi|332004034|gb|AED91417.1| pumilio 21 [Arabidopsis thaliana]
Length = 517
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 136/255 (53%), Gaps = 5/255 (1%)
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
ES L I +T ++FL + +++GS +++ L + L LL+ A+ F LM
Sbjct: 246 ESHLFKIGSALTTTKRIFLHLATNQYGSQALRILFRRSPSLDHLLF---CAVDTNFFLLM 302
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
K G +I+ + K + +Y+ E+ L+LA E GC+ LNN + ++G R I
Sbjct: 303 SDKYGRGLIIPAIRAVDKTKKESLYKLTYEYTLHLARLETGCLALNNVLQEIRGIYRDLI 362
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
++ NA LS G +VVQ++L L++P AI LRG + L++ + GS+VV+KC
Sbjct: 363 FECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYVVEKC 422
Query: 252 LKYQNAVHYIIEELL-NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
LK A ++EE N+ + +++ DK+GN+V+Q+AL ++ + + V KL+ H
Sbjct: 423 LKSDFARDQVLEEFRGNAKEWVRMTTDKFGNFVVQSALRVMKEKEMRPLLREFVEKLRPH 482
Query: 311 LAALRVMKYGSNVYK 325
+ + + G N +
Sbjct: 483 FGKMEIGR-GRNTLR 496
>gi|358378205|gb|EHK15887.1| hypothetical protein TRIVIDRAFT_164108, partial [Trichoderma virens
Gv29-8]
Length = 751
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 160/314 (50%), Gaps = 16/314 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 328 IYELCKDQHGCRYLQKKLEEREGDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 387
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + + + ++++ G+ +++K+I+ V+ P ++ ++ AL+ L+
Sbjct: 388 ERTVLIQNAS---KDMVRIALNQHGTRALQKMIEYVS-TPQQVHLIIEALRFRVVELIQD 443
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A +C+ + H GC L ID+ G ++ ++
Sbjct: 444 LNGNHVIQKCLNKLTASDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHATGQQKLWLIQ 503
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + I +G LS K S V++KCL+
Sbjct: 504 RITEHARILVQDPFGNYVVQYIIDLNEPTFTEPIVATFQGCISQLSRHKFSSNVIEKCLR 563
Query: 254 YQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ--RLVTKLQQ 309
A I+EE+LN ++ + D + NYVIQTAL D + HQ RLV ++
Sbjct: 564 CAQAPSKDMIVEEILN--EMERFLRDSFANYVIQTAL------DFSTPHQKYRLVEAIRP 615
Query: 310 HLAALRVMKYGSNV 323
L +R YG +
Sbjct: 616 ILPQVRTTPYGRRI 629
>gi|389624159|ref|XP_003709733.1| RNA-binding protein [Magnaporthe oryzae 70-15]
gi|351649262|gb|EHA57121.1| RNA-binding protein [Magnaporthe oryzae 70-15]
Length = 1053
Score = 121 bits (304), Expect = 4e-25, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 160/315 (50%), Gaps = 16/315 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDK--LFWV-VSGFTFELMSGQYGRFVFGKFIESC 70
++ L +DQ G +YLQ+ L + R+ D+ + W+ + ELM+ +G ++ K +E C
Sbjct: 597 IYELCKDQHGCRYLQKQL---EGRVPDQVHMIWLETNQHVVELMTDPFGNYLCQKLLEFC 653
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
NE + ++I + QD + + ++++ G+ +++K+I+ + + + S R+ + L
Sbjct: 654 NEEERTVLIQNAS-QDMVRI--ALNQHGTRALQKMIEFINTEEQVQIIIESLRDRVVE-L 709
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL + FI+ A + + H GC L ID+ G ++
Sbjct: 710 IQDLNGNHVIQKCLNKLSCLHSQFIFDAVGAAAVEVGTHRHGCCVLQRCIDHASGDQKVW 769
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I+ +A +L + GNYVVQ+++ L +P + + RG LS K S V++K
Sbjct: 770 LIARITEHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHKFSSNVIEK 829
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CL+ V I EE+L +I ++ D + NYVIQTAL + + RLV ++
Sbjct: 830 CLRCSADVSKDMIAEEILAPGEIERLIRDSFANYVIQTALEYSTPMTK----HRLVETIR 885
Query: 309 QHLAALRVMKYGSNV 323
L +R YG +
Sbjct: 886 PILPTVRSTPYGRRI 900
>gi|356518481|ref|XP_003527907.1| PREDICTED: putative pumilio homolog 10-like [Glycine max]
Length = 668
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 149/276 (53%), Gaps = 2/276 (0%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++++A+DQ G ++LQ ++ G + + +F + G ELM +G ++ K ++ C +
Sbjct: 356 IYNMAKDQNGCRFLQRMVAEGTYQDICMVFEGIIGNVVELMIDSFGNYLVQKLLDVCTDD 415
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I+L +T + S++ G+ V+KLI+ + + V SA++ F L+
Sbjct: 416 QRLQIVLMLTNHPAQLVRVSLNTHGTRVVQKLIETLTSTEQVSL-VKSAIQPGFLDLIKD 474
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ +I +CL+ N FI+ AA++ C+ +A H+ GC L I + G R +++
Sbjct: 475 LNGNHLIQRCLQCLSCQDNQFIFDAAVKFCVEIATHQHGCFVLQRCIHHSVGKNRDKLVT 534
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I + L++ GNYVVQ+V+ + + + + ++V LS K S VV+KCL+
Sbjct: 535 EICKHGLLLAQDAFGNYVVQYVIESDTAAVSAKLLSQFKENFVMLSTQKFSSHVVEKCLQ 594
Query: 254 Y-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
+ ++ I+ ELL+ + Q+ D+Y NYVIQ+AL
Sbjct: 595 HIGDSRSRIVRELLSVPRFEQLLQDQYANYVIQSAL 630
>gi|358396949|gb|EHK46324.1| hypothetical protein TRIATDRAFT_153608 [Trichoderma atroviride IMI
206040]
Length = 757
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 159/314 (50%), Gaps = 12/314 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L +S + ++ + ELM+ +G ++ K +E CN+
Sbjct: 328 IYELCKDQHGCRYLQKKLEERNSDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDD 387
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + Q ++++ G+ +++K+I+ V+ P ++ ++ AL+ L+
Sbjct: 388 ERTVLIQNAS---QRMEDIALNQHGTRALQKMIEYVS-TPQQIHLIIEALRNRVVKLIKD 443
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAAL--EHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL FI+ A + C+ + H GC L ID+ G ++ +
Sbjct: 444 LNGNHVIQKCLNKLTATDAQFIFDAVGNGDKCVEVGTHRHGCCVLQRCIDHATGEQKLWL 503
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ I+ +A L + GNYVVQ+++ L +P + I +G LS K S V++KC
Sbjct: 504 IQRITEHARILVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCIAQLSRHKFSSNVIEKC 563
Query: 252 LKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
L+ A I+EELL+ ++ ++ D + NYVIQTAL + + RLV ++
Sbjct: 564 LRCAQAPSKDMIVEELLSQPEMERLLRDSFANYVIQTALEFSTPHQKY----RLVEAIRP 619
Query: 310 HLAALRVMKYGSNV 323
L +R +G +
Sbjct: 620 ILPQIRTTPHGRRI 633
>gi|134055097|emb|CAK43737.1| unnamed protein product [Aspergillus niger]
Length = 765
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 158/320 (49%), Gaps = 10/320 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 358 ELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSND 417
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ V+ +L+ L+
Sbjct: 418 EQRTDLINNAAHQ---LVKIALNQHGTRALQKMIEFISTAE-QTQTVIHSLEDHVVELVQ 473
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G ++ +++
Sbjct: 474 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLI 533
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C RG+ LS K S V++KCL
Sbjct: 534 AQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCL 593
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +I+E+L ++ ++ D + NYV+QTA+ + R R+V ++
Sbjct: 594 RTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADAETRA----RIVDCIRPI 649
Query: 311 LAALRVMKYGSNVYKWTTAS 330
L ++R +G + AS
Sbjct: 650 LPSIRQTPHGRRIAGKMMAS 669
>gi|429851913|gb|ELA27072.1| pumilio domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 997
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 154/312 (49%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 574 IYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDD 633
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++I + ++++ G+ +++K+I+ V + +++AL+ L+
Sbjct: 634 ERTVLIQNAAAD---MVRIALNQHGTRALQKMIEFVT-TSTQIEMIINALRYQVVELIQD 689
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A +C+ + H GC L ID+ G ++ ++
Sbjct: 690 LNGNHVIQKCLNKLSAKDAQFIFDAVGTNCVDVGTHRHGCCVLQRCIDHASGDQKVWLIS 749
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + I + LS K S V++KCL+
Sbjct: 750 KITEHAPILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFKNRIGQLSRHKFSSNVIEKCLR 809
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ + I+EELL +I ++ D Y NYVIQTAL + RLV ++ L
Sbjct: 810 CSQEPSRDMIVEELLTPGEIERLLRDSYANYVIQTALEYATPHSKF----RLVDAIRPIL 865
Query: 312 AALRVMKYGSNV 323
++R YG +
Sbjct: 866 PSIRSTPYGRRI 877
>gi|147858798|emb|CAN82911.1| hypothetical protein VITISV_015280 [Vitis vinifera]
Length = 773
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 144/290 (49%), Gaps = 16/290 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ G + + +F + ELM +G ++ K ++ CNE
Sbjct: 335 IYMIAKDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEE 394
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I++ +T + + S++ G+ V+KLI+ + + V+SAL+ F L+
Sbjct: 395 QRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLK-TRQQISRVISALEPGFLALIKD 453
Query: 134 KPGSSVI---LQCLEPSYNHKN----------DFIYQAALEHCLYLACHEQGCINLNNFI 180
G+ VI LQCL N + FI+ AA ++C+ +A H+ GC L I
Sbjct: 454 LNGNHVIQRCLQCLSKEDNKEEMIGQLLTCTKKFIFVAAAKYCVEIATHQHGCCVLQRCI 513
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
+ G R+ ++ IS N L++ GNYVVQ +L L+ P + G+YV LS
Sbjct: 514 SHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVHLST 573
Query: 241 TKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
+ S VV+KCL + I+ ELL++ Q+ + NYVIQ AL
Sbjct: 574 QRFSSHVVEKCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKAL 623
>gi|125536693|gb|EAY83181.1| hypothetical protein OsI_38391 [Oryza sativa Indica Group]
Length = 503
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 146/290 (50%), Gaps = 7/290 (2%)
Query: 37 RILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDK 96
R +D +F V+ ELM +G ++ K + C++ Q I+L +T + + S++
Sbjct: 212 REVDFIFAGVARHAVELMVNPFGNYLMQKLLAVCDDEQRMAIVLTLTKDPFVLVRISLNV 271
Query: 97 FGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIY 156
G+ +V+KLI+ + + V+ AL+ F L+ G+ V+ +CL+ + N I+
Sbjct: 272 HGTRAVQKLIESLRTREEIQL-VVEALRPGFLELIKDPNGNHVVQRCLQSFDANDNKPIF 330
Query: 157 QAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVL 216
+AA HCL + GC L I G +R++++ I+ N L++ GNYVVQ+V+
Sbjct: 331 EAAAVHCLDIGMQCHGCCVLQRCIARSGGEQREKLVAAIASNGFELAQDAYGNYVVQYVI 390
Query: 217 SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQV 274
L+ P ++ +G Y+ LS+ K S VV+KCLK + II ELL Q+
Sbjct: 391 DLKVPTANASLTKQFQGRYIHLSMQKFSSNVVEKCLKVFKEADKATIILELLAVPHFEQL 450
Query: 275 ANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVY 324
+ NYVI +A+ + + S+H L ++ H+ LR Y +Y
Sbjct: 451 LQHPFANYVIYSAIQNS----KGSLHSALTNAIRPHVELLRTSPYCKRIY 496
>gi|346972361|gb|EGY15813.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 905
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 160/324 (49%), Gaps = 11/324 (3%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRF 61
Q + EH ++ L +DQ G +YLQ+ L + + ++ + ELM+ +G +
Sbjct: 437 QNLPLEHVGGQ-IYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGNY 495
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMS 121
+ K +E CN+ + ++I QD + + ++++ G+ +++K+I+ V + ++
Sbjct: 496 LCQKLLEYCNDDERTVLIQNAA-QDMVRI--ALNQHGTRALQKMIEFVT-TSIQVQMIID 551
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
AL+ L+ G+ VI +CL FI+ A HC+ + H GC L ID
Sbjct: 552 ALRYRVVELIQDLNGNHVIQKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRCID 611
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ G+++ ++ I+ +A L + GNYVVQ+++ L +P + + R LS
Sbjct: 612 HADGAQKVWLIGKITEHAPVLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQLSRH 671
Query: 242 KCGSFVVQKCLKYQNA--VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
K S V++K L+ A I++ELL ++ ++ D Y NYVIQTAL + +
Sbjct: 672 KFSSNVIEKLLRCSQAQGRDMIVDELLQPGEMDRLLRDSYANYVIQTALEYATPEGK--- 728
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
R+V ++ L A+R YG +
Sbjct: 729 -HRMVEVIRPFLPAVRSTPYGRRI 751
>gi|297790088|ref|XP_002862953.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297308739|gb|EFH39212.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
Query: 51 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
F LM+ G F I +++ L + +T F+ +K+GS V+KL+
Sbjct: 46 FNLMTDGEGVSYFKGMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYGSRRVQKLLGKSD 105
Query: 111 HLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
L +A+ R F + K + V ++ + +Y+ L H L LAC +
Sbjct: 106 DADALF---CAAILRRFLHITTDKYATYVTIRAMVVFDKEMKKAMYEHILYHALDLACDQ 162
Query: 171 QGCINLNNFI-DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
GCI LN+ I D+ R Q+L L++ NA LS SGN+VVQHVL+L D I
Sbjct: 163 HGCIALNDIITDSDDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYDLRCTHNIAV 222
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTA 287
L GH +DLS K GS++V+K L+ + ++ ++ ELL + D ++++A +++GN+V+ A
Sbjct: 223 NLYGHCIDLSFKKYGSYIVEKLLEAEESMVVVVVELLDCDGDTLMRLARNEFGNFVVVKA 282
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L T ++ + LV KL L LR +GSN+
Sbjct: 283 LRFTKAMSKIDLFWGLVQKLMPFLHLLR-RSHGSNI 317
>gi|297793565|ref|XP_002864667.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297310502|gb|EFH40926.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
Query: 51 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
F LM+ G F I +++ L + +T F+ +K+GS V+KL+
Sbjct: 46 FNLMTDGEGVSYFKGMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYGSRRVQKLLGKSD 105
Query: 111 HLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
L +A+ R F + K + V ++ + +Y+ L H L LAC +
Sbjct: 106 DADALF---CAAILRRFLHITTDKYATYVTIRAMVVFDKEMKKAMYEHILYHALDLACDQ 162
Query: 171 QGCINLNNFI-DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
GCI LN+ I D+ R Q+L L++ NA LS SGN+VVQHVL+L D I
Sbjct: 163 HGCIALNDIITDSDDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYDLRCTHNIAV 222
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTA 287
L GH +DLS K GS++V+K L+ + ++ ++ ELL + D ++++A +++GN+V+ A
Sbjct: 223 NLYGHCIDLSFKKYGSYIVEKLLEAEESMVVVVVELLDCDGDTLMRLARNEFGNFVVVKA 282
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L T ++ + LV KL L LR +GSN+
Sbjct: 283 LRFTKAMSKIDLFWGLVQKLMPFLHLLR-RSHGSNI 317
>gi|367035312|ref|XP_003666938.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
gi|347014211|gb|AEO61693.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
Length = 827
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 166/318 (52%), Gaps = 22/318 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDK--LFWVVSG-FTFELMSGQYGRFVFGKFIESC 70
++SL +DQ G +YLQ+ L ++RI ++ + W+ + ELM+ +G ++ K +E C
Sbjct: 378 IYSLCKDQHGCRYLQKQL---ENRIPEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYC 434
Query: 71 NESQLALIILKITFQDQLFLLASV--DKFGSSSVKKLIK-VVAHLPPLLYHVMSALKRLF 127
++ + ++I Q+ + S+ ++ G+ +++K+I+ V + + ++ AL+
Sbjct: 435 SDDERTVLI-----QNAAPSMVSIALNQHGTRALQKMIEHVTTQV--QINLIVEALRNQV 487
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
L+ G+ VI +CL FI+ A +HC+ + H GC L ID+ G++
Sbjct: 488 VELIQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGNQ 547
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+ ++ I+ +A +L + GNYVVQ+++ L + + + G LS K S V
Sbjct: 548 KVWLVECITEHAVTLVQDPFGNYVVQYIIDLNEATFTEPLVKQFEGRIAQLSKHKFSSNV 607
Query: 248 VQKCLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
V+KCL+ + I+ ELL +I ++ D +GNYVIQTAL + +S H RL+
Sbjct: 608 VEKCLRCASDESRDMIVSELLAPGEIERLLRDSFGNYVIQTALDYST---PISKH-RLIE 663
Query: 306 KLQQHLAALRVMKYGSNV 323
++ L ++R YG +
Sbjct: 664 AIRPLLPSVRATPYGRRI 681
>gi|225678938|gb|EEH17222.1| RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 1070
Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats.
Identities = 86/333 (25%), Positives = 158/333 (47%), Gaps = 30/333 (9%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+S+ +DQ G +YLQ+ L + + +F ELM+ +G ++ K +E N+
Sbjct: 610 ELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSND 669
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 670 EQRTALINNAAPQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRGRVVELVQ 725
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R +++
Sbjct: 726 DLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLI 785
Query: 193 HLISVNAASLSRHRSGNYVVQHV--------------------LSLEDPFLIDAICFALR 232
I+ NA +L + GNYVVQ++ + L + I+ IC + R
Sbjct: 786 EQITKNAFTLVQDPFGNYVVQYICKEHQPPQMIWTNFANNDDAVDLNERHFIEPICRSFR 845
Query: 233 GHYVDLSLTKCGSFVVQKCLKYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAE 290
G+ LS K S V++KC++ + +IEE+L ++ ++ D + NYV+QTA+
Sbjct: 846 GNIPALSKQKFSSNVIEKCIRTADNQCRAALIEEMLVPSELEKMLRDSFANYVVQTAMDF 905
Query: 291 TMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
R +L+ ++ L A+R +G +
Sbjct: 906 ADPDSR----NKLIDAIRPILPAIRQTPHGRRI 934
>gi|303319247|ref|XP_003069623.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109309|gb|EER27478.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1003
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 157/313 (50%), Gaps = 10/313 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + +F ELM+ +G ++ K +E N+
Sbjct: 585 ELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSND 644
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I QL +A +++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 645 EQRTALINNAA--PQLVSIA-LNQHGTRALQKMIEFIS-TPEQTQTVIKALRDKVVDLVQ 700
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A C+ + H GC L ID+ G +R Q++
Sbjct: 701 DLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLI 760
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ +L + GNYVVQ++L L +P + +C G LS K S V++KCL
Sbjct: 761 AQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCL 820
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +I+E+L +++ ++ D + NYV+QTA+ + R++ L+ ++
Sbjct: 821 RTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVA----LIEAVRPI 876
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 877 LPSIRQTPHGRRI 889
>gi|385303007|gb|EIF47109.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 435
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 143/296 (48%), Gaps = 23/296 (7%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++++ L +DQ G ++LQ L G K+F + ELM +G ++ K +E N
Sbjct: 32 NEIYYLCKDQHGCRFLQRQLEVGGPEAATKIFNEIQLNVIELMIDPFGNYLIQKLLERVN 91
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
E Q ++ + Q F+ ++D G+ +++KL++ V + ++S+L L
Sbjct: 92 EKQRTTLVRNASSQ---FVRIALDPHGTRALQKLVECV-NTKEEFQIIVSSLSSYVVLLS 147
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL+ +FI+ AA EHC+ +A H GC L D+ ++ + +
Sbjct: 148 RDLNGNHVIQKCLQKLPPSSCNFIFDAACEHCVKIAKHRHGCCVLQRCFDHGSPAQCENL 207
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFL------------------IDAICFALRG 233
+ N LS GNYVVQ+VLS+E+ L I I ALR
Sbjct: 208 SLKVGENXVELSTDPYGNYVVQYVLSMEETRLRSQHDEEAVANTPDTSKAIGLIITALRD 267
Query: 234 HYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQI-LQVANDKYGNYVIQTAL 288
+ V LS K GS VV+K L+ +I +LL I + + +D YGNYV+QT L
Sbjct: 268 NLVRLSTHKFGSNVVEKSLRIPTLAPVLIGQLLKEPDIPIILLHDAYGNYVLQTTL 323
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM+ G+ +I + LE + + + A + +A G L ++ +
Sbjct: 73 LMIDPFGNYLIQKLLERVNEKQRTTLVRNASSQFVRIALDPHGTRALQKLVECVNTKEEF 132
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ +S LSR +GN+V+Q L P F+ DA C H V ++ + G
Sbjct: 133 QIIVSSLSSYVVLLSRDLNGNHVIQKCLQKLPPSSCNFIFDAAC----EHCVKIAKHRHG 188
Query: 245 SFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRL-SVHQR- 302
V+Q+C + + L + ++++ D YGNYV+Q L +M + RL S H
Sbjct: 189 CCVLQRCFDHGSPAQCENLSLKVGENXVELSTDPYGNYVVQYVL--SMEETRLRSQHDEE 246
Query: 303 --------------LVTKLQQHLAALRVMKYGSNVYKWT 327
++T L+ +L L K+GSNV + +
Sbjct: 247 AVANTPDTSKAIGLIITALRDNLVRLSTHKFGSNVVEKS 285
>gi|358055198|dbj|GAA98967.1| hypothetical protein E5Q_05655 [Mixia osmundae IAM 14324]
Length = 852
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 14/315 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+ +L +DQ G ++LQ L G+ D +F + ELM+ +G ++ K E +
Sbjct: 449 DMPALCKDQHGCRFLQRKLEEGNPEYRDMIFSEIFPHFAELMTDAFGNYLSQKLFEFATD 508
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I I+ + + S++ G+ +V+KL+ + + +M AL L+
Sbjct: 509 EQRDALIDSISGE---LVSISLNMHGTRAVQKLLDFLTTRRQVQSLIM-ALNLNVVTLIK 564
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ VI +CL N FIY A +C+ +A H GC L ID+ S+R Q++
Sbjct: 565 DLNSNHVIQKCLNHLPPEDNQFIYNAVATNCIEVATHRHGCCVLQRCIDHASESQRIQLV 624
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ N+ L GNYVVQ+VL L D I+AI G+ LS K S VV+KC+
Sbjct: 625 TEITYNSLILVGDPFGNYVVQYVLDLNDNRFIEAIVRQFVGNVCTLSAQKFSSNVVEKCI 684
Query: 253 KYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLVTKLQ 308
+ +A ++ E LN + + ++ D + NYV+QTAL AE ++ L R++T L
Sbjct: 685 RVADAAGRKVLVNEFLNRNNLERMLRDSFANYVVQTALDWAEPAQKQELV---RMITPL- 740
Query: 309 QHLAALRVMKYGSNV 323
+ ++R YG +
Sbjct: 741 --MPSIRNTPYGKRI 753
>gi|392571884|gb|EIW65056.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 992
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 20/322 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ L +DQ G +YLQ+ L G D +F +LM+ +G ++ K +E +
Sbjct: 535 EIPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTD 594
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA-------HLPPLLYHVMSALKR 125
Q +I + Q + S++ G+ +V+K+I ++ ++ ++ AL
Sbjct: 595 EQRNVICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQTDLRCNGQIHSIILALSL 651
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L+ G+ VI +CL N FIY A +C+ +A H GC L ID+
Sbjct: 652 HVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASE 711
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+R Q+++ I+ NA +L + GNYVVQ++L L D DA+ G+ LS+ K S
Sbjct: 712 HQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSS 771
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR- 302
V++KC++ N +I ELLN ++ ++ D YGNY +QTAL D QR
Sbjct: 772 NVIEKCVRVAEHNTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPAQRA 825
Query: 303 -LVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 826 LLVEGIRPVLPLIRNTPYGKRI 847
>gi|395326054|gb|EJF58468.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 978
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 19/321 (5%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ L +DQ G +YLQ+ L G D +F G +LM+ +G ++ K +E +
Sbjct: 528 EIPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTD 587
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA-----HLPPLLYH-VMSALKRL 126
Q +I + Q + S++ G+ +V+K+I ++ L + H ++ AL
Sbjct: 588 EQRNVICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQTDLGDVQIHSIILALSLH 644
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
L+ G+ VI +CL N FIY A +C+ +A H GC L ID+
Sbjct: 645 VVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEH 704
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+R Q+++ I+ NA +L + GNYVVQ++L L D D + G+ LS+ K S
Sbjct: 705 QRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFAGNVCALSVQKFSSN 764
Query: 247 VVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR-- 302
V++KC++ + +I ELLN ++ ++ D YGNY +QTAL D QR
Sbjct: 765 VIEKCIRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPSQRAL 818
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 819 LVEGIRPVLPLIRNTPYGKRI 839
>gi|358366888|dbj|GAA83508.1| RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 1002
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 158/320 (49%), Gaps = 10/320 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 595 ELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSND 654
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ V+ +L+ L+
Sbjct: 655 EQRTDLINNAAHQ---LVKIALNQHGTRALQKMIEFISTAE-QTQTVIHSLEDHVVELVQ 710
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G ++ +++
Sbjct: 711 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLI 770
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C RG+ LS K S V++KCL
Sbjct: 771 AQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCL 830
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +I+E+L ++ ++ D + NYV+QTA+ + R R+V ++
Sbjct: 831 RTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADAETRA----RIVDCIRPI 886
Query: 311 LAALRVMKYGSNVYKWTTAS 330
L ++R +G + AS
Sbjct: 887 LPSIRQTPHGRRIAGKMMAS 906
>gi|297852018|ref|XP_002893890.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
gi|297339732|gb|EFH70149.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 153/312 (49%), Gaps = 9/312 (2%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+DQ G + LQ+ + G +F + EL +G ++ K +E +E Q
Sbjct: 258 MAKDQIGCRVLQKLVEEGTVLDAKVIFHEIIDHVVELSMDPFGNYIVQKLLEVSDEEQRT 317
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
LI+ +T + + + ++ +G+ V+K+I+ V + V LK F L+ G
Sbjct: 318 LIVSVLTSKPRELIQICLNTYGTRVVQKMIETVKTKQQIAL-VKFGLKPGFLALVKDLNG 376
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI CL+ + N F+ +AA ++C +A H GC L + N G +R++++ IS
Sbjct: 377 NHVIQSCLQTLGPNDNKFVLEAATKYCAEIAIHRHGCCVLQCCLSNSVGLQRERLVAEIS 436
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL-KYQ 255
NA LS+ GNYVVQ++ +E + R HY +L+ K S V++KCL KY
Sbjct: 437 RNALHLSQDPFGNYVVQYL--IEQQVSAVKLLVRFRMHYAELATQKFSSHVIEKCLRKYP 494
Query: 256 NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALR 315
+ I+ EL+ + D Y NYVIQTAL+ T + V +LV K+ + LR
Sbjct: 495 ESRAEIVRELICVPNFEYLLQDPYANYVIQTALSVT----KGPVRAKLVEKVYR-FGKLR 549
Query: 316 VMKYGSNVYKWT 327
Y ++ T
Sbjct: 550 SSPYCKKIFSKT 561
>gi|356551678|ref|XP_003544201.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 622
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 145/279 (51%), Gaps = 2/279 (0%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ LA+ Q G ++LQ + G S + +F V ELM +G ++ K ++ +
Sbjct: 310 IYYLAKHQNGCRFLQRMIDEGTSEHVLIVFNGVIDDVVELMVDPFGNYLVQKLLDVGGDD 369
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++ +T + + S++ G+ V+KLI V + +MSA++ F L+
Sbjct: 370 ERLQVVSMLTKEPGQLIKTSLNIHGTRVVQKLITTVDSRKQIAM-LMSAIQSGFLALIKD 428
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ N+FI+ AA + C+ +A H+ GC L ID G + +++
Sbjct: 429 LNGNHVIQRCLQYFSCKDNEFIFYAATKFCVEIATHQHGCCVLQRCIDYSTGKYQDKLVK 488
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I + L++ GNYVVQ+++ +E+P + +G+Y +LS+ K S VV+KCL
Sbjct: 489 EICRHGLLLAQDPFGNYVVQYIIEMENPTASFKLHSQFKGNYTNLSMQKYSSHVVEKCLV 548
Query: 254 YQNAVH-YIIEELLNSDQILQVANDKYGNYVIQTALAET 291
+ + I++E L+ Q+ D YGNYV+Q AL T
Sbjct: 549 HLAEIKSRIVQEFLSFPHFEQLLQDLYGNYVVQRALGVT 587
>gi|317025399|ref|XP_001388993.2| RNA-binding protein [Aspergillus niger CBS 513.88]
Length = 1000
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 158/320 (49%), Gaps = 10/320 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + + +F ELM+ +G ++ K +E N+
Sbjct: 593 ELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSND 652
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ V+ +L+ L+
Sbjct: 653 EQRTDLINNAAHQ---LVKIALNQHGTRALQKMIEFISTAE-QTQTVIHSLEDHVVELVQ 708
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A +C+ + H GC L ID+ G ++ +++
Sbjct: 709 DLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLI 768
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P + +C RG+ LS K S V++KCL
Sbjct: 769 AQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCL 828
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +I+E+L ++ ++ D + NYV+QTA+ + R R+V ++
Sbjct: 829 RTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADAETRA----RIVDCIRPI 884
Query: 311 LAALRVMKYGSNVYKWTTAS 330
L ++R +G + AS
Sbjct: 885 LPSIRQTPHGRRIAGKMMAS 904
>gi|406606752|emb|CCH41788.1| hypothetical protein BN7_1327 [Wickerhamomyces ciferrii]
Length = 743
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 156/284 (54%), Gaps = 20/284 (7%)
Query: 13 DLFSLAQDQEGSQYLQE--NLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
+++SL +DQ G ++LQ+ +L++G S I+ F + ELM +G ++ K +E
Sbjct: 398 EIYSLCKDQHGCRFLQKQLDLNTGSSTII---FDEIHQHVIELMIDPFGNYLIQKLLEKV 454
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKR 125
N+ Q ++ + Q F+ ++D G+ +++KL++ + A + ++ +L
Sbjct: 455 NDEQRITLVENASSQ---FVSIALDPHGTRALQKLVECINTQKEAEI------IVESLSS 505
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L G+ VI +CL+ + FI+ AA E+C +A H GC L +D+
Sbjct: 506 DVVSLSRDLNGNHVIQKCLQRLTPADSQFIFDAASENCSKIATHRHGCCVLQRCLDHGSK 565
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ +Q+ +IS +A LS GNYVVQ+VL+ ++ I I +++ V LSL K GS
Sbjct: 566 EQCEQLSLVISKSAVDLSLDAFGNYVVQYVLAKDEKEAIAKIIDSVKTEIVKLSLHKFGS 625
Query: 246 FVVQKCLKYQNAVHYIIEELLNS-DQILQVANDKYGNYVIQTAL 288
V++KCL+ +I+E+L S D+++++ ND +GNYV+QT+L
Sbjct: 626 NVIEKCLRVSTLSKQLIDEILKSGDELVKLLNDPFGNYVLQTSL 669
>gi|392579559|gb|EIW72686.1| hypothetical protein TREMEDRAFT_72846 [Tremella mesenterica DSM
1558]
Length = 913
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 156/321 (48%), Gaps = 23/321 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L L +DQ G +YLQ L GD+ D +F G ELM+ +G ++ K +E +
Sbjct: 447 ELLMLCKDQHGCRYLQRKLEEGDAGHRDMIFLETYGHFPELMTDPFGNYLCQKLLEYSTD 506
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALKRL 126
Q + II + + S++ G+ +V+K++ ++ + L+Y + + L
Sbjct: 507 EQRSAIIDSVAND---LVAISLNMHGTRAVQKMVDFLSAPRQAKQIRTLIYALSMNVVAL 563
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
K L G+ VI +CL N FIY A + + +A H GC L ID+ +
Sbjct: 564 IKDLN----GNHVIQKCLNKLCPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPA 619
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+R Q++ I N+ L + GNYV+Q++L L D + + G+ LS+ K S
Sbjct: 620 QRMQLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSN 679
Query: 247 VVQKCLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR-- 302
VV+KC++ + ++ E+LN ++ ++ D YGNYVIQT L D + QR
Sbjct: 680 VVEKCIRVADPEVRKSLVSEVLNRSRLEKLLRDSYGNYVIQTIL------DYCELSQRMV 733
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
LV ++ L ++R YG +
Sbjct: 734 LVECIRPILPSIRNTPYGKRI 754
>gi|240276968|gb|EER40478.1| RNA-binding protein [Ajellomyces capsulatus H143]
Length = 847
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 147/313 (46%), Gaps = 48/313 (15%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ + +DQ G +YLQ+ L + +F ELM+ +G ++ K +E N+
Sbjct: 456 ELYGMCKDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSND 515
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I +++ +L+K+ L H AL+++ +F+
Sbjct: 516 EQRTALI-------------------NNAAPQLVKIA-----LNQHGTRALQKMIEFIST 551
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ FIY A E C+ + H GC L ID+ G +R +++
Sbjct: 552 PE------------------QFIYDAVGESCVPVGTHRHGCCVLQRCIDHASGDQRARLI 593
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L +P I+ IC + RG+ LS K S V++KC+
Sbjct: 594 EQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCI 653
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +++E+L ++ ++ D + NYV+QTA+ + R +LV ++
Sbjct: 654 RTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAMDFADPEYRT----KLVEAIRPI 709
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 710 LPAIRQTPHGRRI 722
>gi|302657003|ref|XP_003020235.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
gi|291184046|gb|EFE39617.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
Length = 927
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 12/314 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ + +DQ G +YLQ L G + +F ELM+ +G ++ K +E N+
Sbjct: 505 EIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTND 564
Query: 73 SQ-LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q LI + Q+ L ++ G+ +++K+I+ ++ P + V+ AL L+
Sbjct: 565 EQRTGLINIAAPHLVQIAL----NQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELV 619
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL FIY A + C+ + H GC L ID+ G +R ++
Sbjct: 620 QDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKL 679
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ I+ ++ SL + GNYV+Q++L L +P +C +G LS K S V++KC
Sbjct: 680 IEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKC 739
Query: 252 LKYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ N I+E+L+ ++ + D + NYVIQTA+ + R + L+ ++
Sbjct: 740 IRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPESRNT----LIEAVRP 795
Query: 310 HLAALRVMKYGSNV 323
L +R +G +
Sbjct: 796 LLPGIRSQPHGRRI 809
>gi|156095470|ref|XP_001613770.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148802644|gb|EDL44043.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 1542
Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats.
Identities = 92/326 (28%), Positives = 164/326 (50%), Gaps = 12/326 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++F++A+DQ G + LQ L + R + +++ ELM +G ++ K +E C
Sbjct: 641 NIFNIAKDQTGCRILQRILERKNPRHVQEIYREALDNIVELMVDPFGNYLCQKLMEVCTS 700
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q+ II DQL + ASV G+ +V+KLI+++ P + AL+ L+
Sbjct: 701 EQIERIIDAAA--DQL-VSASVSVHGTRTVQKLIEMI-RTPAQIAKATRALQNSVITLIK 756
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ V+ +CL +H+ +FIY+A L +C+ ++ H GC + ID+ ++ +
Sbjct: 757 DINGNHVVQKCLVSLTSHQCEFIYKAILNNCVEVSTHRHGCCVIQRCIDSANEQQKALFI 816
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ + L + GNYVVQ+VL+L + I L + +L+ K S VV+KCL
Sbjct: 817 RHITDHTLELVQDAFGNYVVQYVLNLGREKVNLDIVHRLLPNLEELATQKFASNVVEKCL 876
Query: 253 KYQNA--VHYIIEELL--NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
++ +I ++L D + ++ D++GNYVIQ AL+ + L+ +LV ++
Sbjct: 877 TIGSSRCRKILINDILRRGKDSMKKLILDRFGNYVIQRALS-VASEPELT---KLVEGIK 932
Query: 309 QHLAALRVMKYGSNVYKWTTASHPCL 334
++ LR + G + HP L
Sbjct: 933 PYIKELRNISSGKRIAWKLAQKHPLL 958
>gi|8778968|gb|AAF79883.1|AC021198_3 Contains similarity to a putative protein CAB78009 gi|7267527 from
Arabidopsis thaliana BAC T32A17 gb|AL161513. It contains
Pumilio-family RNA binding domains PF|00806 [Arabidopsis
thaliana]
Length = 671
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 22/314 (7%)
Query: 10 TNHDLFSL----------AQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYG 59
+N+DL S+ A+DQ G + LQ+ + G + + EL +G
Sbjct: 347 SNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFG 406
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
++ K + +E Q LI+ +T + + ++ +G+ V+K+I+ V + V
Sbjct: 407 NYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIAL-V 465
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
S LK F L+ G+ VI CL+ + N+F+ +AA ++C +A H GC L
Sbjct: 466 KSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCC 525
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAI--CFALRGHYVD 237
I N G +R++++ IS N+ LS+ GNYVVQ+++ + + A+ R HY +
Sbjct: 526 ISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQ----VSAVKLLVQFRMHYAE 581
Query: 238 LSLTKCGSFVVQKCL-KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDR 296
L+ K S V++KCL KY + I+ ELL + D Y NYVIQTAL+ T +
Sbjct: 582 LATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQDPYANYVIQTALSVT----K 637
Query: 297 LSVHQRLVTKLQQH 310
V +LV K+ ++
Sbjct: 638 GPVRAKLVAKVYRY 651
>gi|408388462|gb|EKJ68146.1| hypothetical protein FPSE_11613 [Fusarium pseudograminearum CS3096]
Length = 859
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 155/312 (49%), Gaps = 10/312 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 348 IYELCKDQHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKLLEFCNDD 407
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ +I + Q + ++++ G+ +++K+I+ V+ P ++ ++ AL+ L+
Sbjct: 408 ERTTLIQNAS---QDMVRIALNQHGTRALQKMIEYVS-TPQQVHIIIEALRFRVVELIQD 463
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A +C+ + H GC L ID+ G ++ ++
Sbjct: 464 LNGNHVIQKCLNRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQ 523
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + I + LS K S V++KCL+
Sbjct: 524 RITEHARVLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHKFSSNVIEKCLR 583
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ I++ELL + + ++ D + NYVIQTAL + RLV ++ L
Sbjct: 584 CSQPPSRDLIVDELLRNQDMERLLRDSFANYVIQTALEYATPHYKY----RLVEAIRPIL 639
Query: 312 AALRVMKYGSNV 323
+R YG +
Sbjct: 640 PQIRTTPYGRRI 651
>gi|15220217|ref|NP_174811.1| protein pumilio 9 [Arabidopsis thaliana]
gi|122244101|sp|Q1PFN9.1|PUM9_ARATH RecName: Full=Pumilio homolog 9; Short=APUM-9; Short=AtPUM9
gi|91805917|gb|ABE65687.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332193705|gb|AEE31826.1| protein pumilio 9 [Arabidopsis thaliana]
Length = 564
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 22/314 (7%)
Query: 10 TNHDLFSL----------AQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYG 59
+N+DL S+ A+DQ G + LQ+ + G + + EL +G
Sbjct: 240 SNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFG 299
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
++ K + +E Q LI+ +T + + ++ +G+ V+K+I+ V + V
Sbjct: 300 NYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIAL-V 358
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
S LK F L+ G+ VI CL+ + N+F+ +AA ++C +A H GC L
Sbjct: 359 KSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCC 418
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAI--CFALRGHYVD 237
I N G +R++++ IS N+ LS+ GNYVVQ+++ + + A+ R HY +
Sbjct: 419 ISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQ----VSAVKLLVQFRMHYAE 474
Query: 238 LSLTKCGSFVVQKCL-KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDR 296
L+ K S V++KCL KY + I+ ELL + D Y NYVIQTAL+ T +
Sbjct: 475 LATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQDPYANYVIQTALSVT----K 530
Query: 297 LSVHQRLVTKLQQH 310
V +LV K+ ++
Sbjct: 531 GPVRAKLVAKVYRY 544
>gi|345568412|gb|EGX51306.1| hypothetical protein AOL_s00054g376 [Arthrobotrys oligospora ATCC
24927]
Length = 965
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 161/332 (48%), Gaps = 28/332 (8%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++++ L +DQ G ++LQ L + + ++ +F F ELM+ +G ++ K +E N
Sbjct: 566 NEIYLLCKDQHGCRFLQRKLEEQNPKDIEIIFRETQAFIVELMTDPFGNYLCQKLLEHTN 625
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q + ++ L +A +++ G+ +++K+I+ ++ P + V++AL+ L+
Sbjct: 626 NEQRSKLVNNAA--PHLVEIA-LNQHGTRALQKMIEFLS-TPDQIQTVINALRGKVVELI 681
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL FI+ A ++ + + H GC L ID+ +R Q+
Sbjct: 682 QDLNGNHVIQKCLNRLKPEDAQFIFDAVGKNSVTVGTHRHGCCVLQRCIDHASTPQRAQL 741
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ I+ NA +L R GNYVVQ++L L +P L + + G ++LS+ K S V++K
Sbjct: 742 IAHITENAFALVRDPFGNYVVQYILDLGEPELAEPMIHKFLGRIIELSMQKFSSNVIEKV 801
Query: 252 LKYQ--------------------NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAET 291
+Q +++E++N ++ ++ D Y NYVIQTAL
Sbjct: 802 CPFQIQRPIPSGLTLAQCIRVSSKETRALMVKEIVNPPELEKLIRDSYANYVIQTALDYA 861
Query: 292 MRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
R LV L+ + ++R+ YG +
Sbjct: 862 EADSRT----MLVDNLRPIMPSIRMTPYGRRI 889
>gi|340517824|gb|EGR48067.1| RNA binding protein [Trichoderma reesei QM6a]
Length = 661
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 154/313 (49%), Gaps = 13/313 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSG-FTFELMSGQYGRFVFGKFIESCNE 72
++ L +DQ G +YLQ+ L + W+ + ELM+ +G ++ K +E CN+
Sbjct: 318 IYELCKDQYGCRYLQKKLEERVHMNQVHMIWLETNQHVIELMTDPFGNYLCQKLLELCND 377
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ ++I + Q + ++++ G+ +++K+I+ V+ P ++ ++ AL+ L+
Sbjct: 378 DERTVLIQNAS---QDMVRIALNQHGTRALQKMIETVS-TPQQVHLIIEALRYRVVQLIQ 433
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FI+ A E C+ + H GC L ID+ G ++ ++
Sbjct: 434 DLNGNHVIQKCLNKLTASDAQFIFDAVGEKCVEVGTHRHGCCVLQRCIDHATGDQKLWLI 493
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ +A L + GNYVVQ+++ L +P + I + G LS K S V++KCL
Sbjct: 494 QCITKDARILVQDPFGNYVVQYIIDLHEPTFTEPIVASFEGCISMLSRHKFSSNVIEKCL 553
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + I+ ELL I D + NYV+QTAL + Q + RLV ++
Sbjct: 554 RCAQPPSKDMIVSELLGD--IEGCLQDSFANYVVQTALDFSTPQ----LKHRLVEAIRPV 607
Query: 311 LAALRVMKYGSNV 323
L +R YG +
Sbjct: 608 LPKIRTTPYGRRI 620
>gi|449300578|gb|EMC96590.1| hypothetical protein BAUCODRAFT_24332 [Baudoinia compniacensis UAMH
10762]
Length = 1160
Score = 117 bits (293), Expect = 7e-24, Method: Composition-based stats.
Identities = 81/318 (25%), Positives = 156/318 (49%), Gaps = 22/318 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G +YLQ L ++ +F + ELM+ +G ++ K +E C +
Sbjct: 719 EIYSLCKDQHGCRYLQRKLDERADNAVEIVFVEIKDHIIELMTDPFGNYLCQKLLE-CTD 777
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ +++K + + ++++ G+ +++K+I+ ++ P + ++ AL+ L+
Sbjct: 778 DEQRTVLIKNSASSMTKI--ALNQHGTRALQKMIEYIS-TPQQIQIIIEALRYDVVLLIQ 834
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FI+ + +C+ + H GC L ID+ G ++ ++
Sbjct: 835 DLNGNHVIQKCLNHLSPENAQFIFDSVGTNCIAVGTHRHGCCVLQRCIDHASGLQKGALV 894
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ NA +L + GNYVVQ++L L +P + +C + LS K S VV+KC+
Sbjct: 895 DQVINNAFALVQDPFGNYVVQYILDLGEPCFTEPLCQSFAHQVAYLSKQKFSSNVVEKCI 954
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTA-----------LAETMRQDRLSV 299
+ N +I E+ ++ + D + NYV+QTA L E +R S+
Sbjct: 955 RCATGNVRRAVILEIAEPRELAMLLRDSFANYVVQTAMDFADEETKNLLMENVRPILPSI 1014
Query: 300 H-----QRLVTKLQQHLA 312
+R+ TKLQ++ A
Sbjct: 1015 RHTPYGRRIATKLQEYDA 1032
>gi|296086803|emb|CBI32952.3| unnamed protein product [Vitis vinifera]
Length = 275
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 7/273 (2%)
Query: 54 MSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLP 113
M +G ++ K ++ CNE Q I++ +T + + S++ G+ V+KLI+ +
Sbjct: 1 MMNPFGNYLMQKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLK-TR 59
Query: 114 PLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGC 173
+ V+SAL+ F L+ G+ VI +CL+ N FI+ AA ++C+ +A H+ GC
Sbjct: 60 QQISRVISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQHGC 119
Query: 174 INLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRG 233
L I + G R+ ++ IS N L++ GNYVVQ +L L+ P + G
Sbjct: 120 CVLQRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEG 179
Query: 234 HYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAET 291
+YV LS + S VV+KCL + I+ ELL++ Q+ + NYVIQ AL
Sbjct: 180 NYVHLSTQRFSSHVVEKCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKAL--- 236
Query: 292 MRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVY 324
+ +H + ++ H A +R Y ++
Sbjct: 237 -QVYEGPLHNAFIEAIESHKAIMRNSPYSKKIF 268
>gi|401406880|ref|XP_003882889.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
gi|325117305|emb|CBZ52857.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
Length = 1537
Score = 117 bits (292), Expect = 1e-23, Method: Composition-based stats.
Identities = 93/313 (29%), Positives = 152/313 (48%), Gaps = 13/313 (4%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+DQ G + LQ LS + ++ + V L+ +G ++ K +E C E QL
Sbjct: 1096 IARDQIGCRMLQRKLSDANPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEQCEEPQLL 1155
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLP---PLLYHVMSALKRLFKFLMMT 133
++ KI + + + G+ +V+KLI+V A LP +++AL+ L
Sbjct: 1156 QLVRKIRPR---LVDICLSPHGTRAVQKLIEVCAGLPINSTATNELLAALRPSIVLLAKD 1212
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ V+ + L + +F++ +HC+ ++ GC + ID + +IL
Sbjct: 1213 VNANHVVQKILSSFPAARCEFVFAQVKKHCVEISTERHGCCVMQRCIDAAPPRAKSEILQ 1272
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ NA L + GNYVVQ+VL L+ A+ ALRGH +LS+ K S VV+KCL
Sbjct: 1273 EIAANALELMQDAFGNYVVQYVLDLQIDGFNGAVTGALRGHIRELSMQKFSSNVVEKCLM 1332
Query: 254 YQNAVH--YIIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
I++ELL + L+ + D Y NYVIQ AL + + Q+L+ +Q
Sbjct: 1333 LGTPEQRSLIVDELLADGEGLKDMLLDSYANYVIQRALTVSSP----AAQQQLLLVIQPC 1388
Query: 311 LAALRVMKYGSNV 323
L+ LR + GS V
Sbjct: 1389 LSQLRQTQPGSRV 1401
>gi|392597028|gb|EIW86350.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 981
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 16/317 (5%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMS--GQYGRFVFGKFIESC 70
++ +L +DQ G +YLQ+ L G D +F ELM+ +G ++ K +E
Sbjct: 536 EIPALCKDQHGCRYLQKKLEEGVVEHRDMIFRETFSHFAELMTVLDPFGNYLCQKLLEYS 595
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+ Q LI + Q + S++ G+ +V+K+I ++ ++ ++ AL L
Sbjct: 596 TDEQRNLICESVA---QDLVNISLNMHGTRAVQKMIDFLSTRR-QIHSIILALSLHVVVL 651
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL N FIY A +C+ +A H GC L ID+ +R Q
Sbjct: 652 IKDLNGNHVIQKCLNKLSPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQRIQ 711
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+++ I+ NA +L + GNYVVQ+VL L D + + G+ LS+ K S V++K
Sbjct: 712 LVNEITYNALTLVQDPYGNYVVQYVLDLNDNRFSEGVIRQFTGNVCALSVQKFSSNVIEK 771
Query: 251 CLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTK 306
C++ + +IEE+LN ++ ++ D YGNY +QTAL D QR LV
Sbjct: 772 CIRVAEHSTRKILIEEVLNRSRLEKLLRDSYGNYCVQTAL------DYAEASQRALLVEG 825
Query: 307 LQQHLAALRVMKYGSNV 323
++ L +R YG +
Sbjct: 826 IRPVLPLIRNTPYGKRI 842
>gi|297796981|ref|XP_002866375.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297312210|gb|EFH42634.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
Query: 51 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
F LM+ F + I +++ L + +T F+ +K+GS V+KL+
Sbjct: 46 FNLMTDGEAVSYFREMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYGSRRVQKLLGKSD 105
Query: 111 HLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
+ +A+ R F + K S V ++ + +Y+ L H L +AC +
Sbjct: 106 EVDAFF---CAAILRRFLHITTDKYASYVTIRGMVVFDKEMKKPMYEHILYHALDIACDQ 162
Query: 171 QGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
GCI LN+ I + R Q+L L++ NA LS SGN+VVQHVL+L + I I
Sbjct: 163 HGCIALNDIITDADDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYELRCIHNIAV 222
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTA 287
L GH +DLS K GS++V+K L+ + ++ ++ ELL + D ++++A +++GN+V+ A
Sbjct: 223 NLFGHCIDLSFKKYGSYIVEKLLEAEESMLVVVVELLDCDGDTLMRLARNEFGNFVVVKA 282
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L T ++ + LV KL + LR +GSN+
Sbjct: 283 LRFTKAMSKIDLFWGLVQKLMPFIHLLR-RSHGSNI 317
>gi|46107916|ref|XP_381017.1| hypothetical protein FG00841.1 [Gibberella zeae PH-1]
Length = 779
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 157/318 (49%), Gaps = 10/318 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ L +DQ G +YLQ+ L + + ++ + ELM+ +G ++ K +E CN+
Sbjct: 347 IYELCKDQHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKLLEFCNDD 406
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ +I + Q + ++++ G+ +++K+I+ V+ P ++ ++ AL+ L+
Sbjct: 407 ERTTLIQNAS---QDMVRIALNQHGTRALQKMIEYVS-TPQQVHIIIEALRFRVVELIQD 462
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL FI+ A +C+ + H GC L ID+ G ++ ++
Sbjct: 463 LNGNHVIQKCLNRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQ 522
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I+ +A L + GNYVVQ+++ L +P + I + LS K S V++KCL+
Sbjct: 523 RITEHARVLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHKFSSNVIEKCLR 582
Query: 254 --YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ I++ELL + + ++ D + NYVIQTAL + RLV ++ L
Sbjct: 583 CSQPPSRDLIVDELLRNQDMERLLRDSFANYVIQTALEYATPHYKY----RLVEAIRPIL 638
Query: 312 AALRVMKYGSNVYKWTTA 329
+R YG + +A
Sbjct: 639 PQIRTTPYGRRIQAKISA 656
>gi|297809043|ref|XP_002872405.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
gi|297318242|gb|EFH48664.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 137/275 (49%), Gaps = 4/275 (1%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
L S A+D+ S+ LQ+ ++ G +DK+F + ELM +G VF K +E C +
Sbjct: 122 LLSRAKDRIESRLLQDVIAKGSKETIDKIFDNLISNVCELMLDPFGHRVFEKLMEKCTDE 181
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q+ ++ + Q F+ VD G+ +++ L++ + + + M+ L + L
Sbjct: 182 QITRVLDIVLQQPLQFVRLCVDSHGTRAIQDLMRSLCSVEQIA-RFMATLCHVALLLTKD 240
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ VIL C + ++ + +++C +A + G LN I R ++
Sbjct: 241 ANANLVILFCFNHFSPSHSRYLLEVIVQNCYQVAIDQHGYCMLNQCIRQSSRELRDPLIK 300
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I N L ++ GNYVVQ+VL LED + A+ L G+YV LS K GS VVQKCL+
Sbjct: 301 EIITNVVRLCKNCYGNYVVQYVLDLEDCEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE 360
Query: 254 YQN-AVHYIIEELLNSDQILQVANDKYGNYVIQTA 287
+ II ELL+ L V D +GNYVIQTA
Sbjct: 361 NREFCSRRIIAELLSDIDSLLV--DPFGNYVIQTA 393
>gi|150863841|ref|XP_001382453.2| hypothetical protein PICST_66941 [Scheffersomyces stipitis CBS
6054]
gi|149385097|gb|ABN64424.2| RNA binding protein [Scheffersomyces stipitis CBS 6054]
Length = 794
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 156/317 (49%), Gaps = 40/317 (12%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG---------DSRILDKLFWVVSGFT------FELMSGQ 57
++FSL +DQ G ++LQ L G DS +L F ELM+
Sbjct: 468 EIFSLCKDQHGCRFLQRQLDLGREVAEGRNTDSSVLSNDIAATMIFNEIYLKIVELMTDP 527
Query: 58 YGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIK---------- 107
+G ++ K E+ + Q +++ + F+ ++D G+ +++KL++
Sbjct: 528 FGNYLIQKLFENVSVDQRIILVKNAAPE---FIRIALDPHGTRALQKLVECISTEEESKL 584
Query: 108 VVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLA 167
++ L P H++S + L G+ V+ +CL+ +N FI++ A HC +A
Sbjct: 585 IIGSLSP---HIVSLSRDLN--------GNHVVQKCLQKLKPEENQFIFETASLHCNEIA 633
Query: 168 CHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAI 227
H GC L +D+ +R+Q+ ++ NA +LS GNYVVQ+VLS D I I
Sbjct: 634 THRHGCCVLQRCLDHGNSDQRRQLSLKVAENATNLSLDPFGNYVVQYVLSRGDEGSIQII 693
Query: 228 CFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL-NSDQILQVANDKYGNYVIQT 286
++ + + LSL K GS V++K L+ + +I+ LL + D+ + ND +GNYV+QT
Sbjct: 694 MDHIKSNIISLSLHKFGSNVIEKSLRINKLTNTLIDVLLKHQDRFSDMLNDAFGNYVLQT 753
Query: 287 ALAETMRQDRLSVHQRL 303
+L QD S+ Q L
Sbjct: 754 SLDVANPQDLNSLSQAL 770
>gi|440472633|gb|ELQ41484.1| pumilio domain-containing protein, partial [Magnaporthe oryzae Y34]
gi|440485994|gb|ELQ65903.1| pumilio domain-containing protein, partial [Magnaporthe oryzae
P131]
Length = 811
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 161/315 (51%), Gaps = 16/315 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDK--LFWVVSG-FTFELMSGQYGRFVFGKFIESC 70
++ L +DQ G +YLQ+ L + R+ D+ + W+ + ELM+ +G ++ K +E C
Sbjct: 355 IYELCKDQHGCRYLQKQL---EGRVPDQVHMIWLETNQHVVELMTDPFGNYLCQKLLEFC 411
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
NE + ++I + QD + + ++++ G+ +++K+I+ + + + ++ +L+ L
Sbjct: 412 NEEERTVLIQNAS-QDMVRI--ALNQHGTRALQKMIEFI-NTEEQVQIIIESLRDRVVEL 467
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL + FI+ A + + H GC L ID+ G ++
Sbjct: 468 IQDLNGNHVIQKCLNKLSCLHSQFIFDAVGAAAVEVGTHRHGCCVLQRCIDHASGDQKVW 527
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I+ +A +L + GNYVVQ+++ L +P + + RG LS K S V++K
Sbjct: 528 LIARITEHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHKFSSNVIEK 587
Query: 251 CLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CL+ V I EE+L +I ++ D + NYVIQTAL + + RLV ++
Sbjct: 588 CLRCSADVSKDMIAEEILAPGEIERLIRDSFANYVIQTALEYSTPMTK----HRLVETIR 643
Query: 309 QHLAALRVMKYGSNV 323
L +R YG +
Sbjct: 644 PILPTVRSTPYGRRI 658
>gi|363755368|ref|XP_003647899.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891935|gb|AET41082.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
Length = 731
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 159/319 (49%), Gaps = 14/319 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++SL +DQ G ++LQ L G S +F + + ELM+ +G ++ K +E E
Sbjct: 411 IYSLCKDQHGCRFLQRQLDIGGSEAATSIFEETNQYVVELMTDSFGNYLIQKLVERVTEE 470
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++ + F+ ++D G+ +++KL++ + ++S+L+ L
Sbjct: 471 QRITLVKSSAPR---FVSIALDPHGTRALQKLVECI-DTEVESQTIISSLRDSVVELSRD 526
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ + ++ FI+ AA + C+ +A H GC L +D+ +RKQ+
Sbjct: 527 LNGNHVVQKCLQRLSSAESQFIFDAACKECVKIATHRHGCCVLQRCLDHGNKEQRKQLCD 586
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLID-----AICFALRGHYVDLSLTKCGSFVV 248
I N L+ GNYVVQ++L+ E + I L+ ++LSL K GS VV
Sbjct: 587 NILDNVNLLTLDPFGNYVVQYILTKESELGSNHRHTHEIVNILKPRIIELSLHKFGSNVV 646
Query: 249 QKCLKYQNAVHYIIEELLN---SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+K L+ +I ELLN S I Q+ +D +GNYV+QTAL + + ++ RL
Sbjct: 647 EKILRTPIVAEIMIAELLNTGASHGIEQLLHDGFGNYVLQTAL-DVAKPANSYLYNRLTE 705
Query: 306 KLQQHL-AALRVMKYGSNV 323
L+ L +R +G +
Sbjct: 706 ILKPMLIGPIRNTPHGRRI 724
>gi|388579386|gb|EIM19710.1| ARM repeat-containing protein, partial [Wallemia sebi CBS 633.66]
Length = 664
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 160/325 (49%), Gaps = 24/325 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG------------DSRILDKLFWVVSGFTFELMSGQYGR 60
+++SL +DQ G +YLQ+ L SR L +F + ELM+ +G
Sbjct: 186 EIYSLCKDQHGCRYLQKKLEDDDAVDEVVDGVQLTSRQL--IFNQIYTHFSELMTDPFGN 243
Query: 61 FVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVM 120
++ K +E N+ Q + ++ + + S++ G+ +V+K+I ++ + +M
Sbjct: 244 YLCQKMLEFANDQQRDTLCETVSPE---LVTISLNMHGTRAVQKMIDYLSTRRQINTIIM 300
Query: 121 SALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
S L L+ G+ VI +CL + N FIY A +C+ +A H GC L I
Sbjct: 301 S-LSLNVVTLIKDLNGNHVIQKCLNRLIPNDNQFIYNAVASNCIEVATHRHGCCVLQRCI 359
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
D+ +R Q++ I+ +A +L + GNYVVQ+VL L D D + GH LS+
Sbjct: 360 DHASDQQRIQLVTEITYHALTLIQDPFGNYVVQYVLDLNDNRFSDGVVRQFLGHICALSV 419
Query: 241 TKCGSFVVQKCLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLS 298
K S V++KC++ +A +I+EL + ++ ++ D +GNYV+QTAL R++
Sbjct: 420 QKFSSNVIEKCIRVADASTRSSVIDELNHRPRLEKLLRDAFGNYVVQTALDFAEPVQRIA 479
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 480 ----LVEAIRPILPMIRNTPYGKRI 500
>gi|413956754|gb|AFW89403.1| hypothetical protein ZEAMMB73_540172 [Zea mays]
Length = 676
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 157/311 (50%), Gaps = 12/311 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ +YLQ+ L G + D +F + +LM +G ++ + +E C+E
Sbjct: 361 IYHMAKDQNWCRYLQDKLLEGKHHV-DVIFEGIINHIADLMISSFGNYLAQEIVEVCDEG 419
Query: 74 QLALIILKIT-FQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q+ IIL +T + + + S++ G+ V+KLI+ V+ ++ ++SAL+ F L+
Sbjct: 420 QMLRIILVLTQYPLKQLIAVSLNTHGTRVVQKLIEKVSSREQIML-IISALQPSFMLLVN 478
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G VI +CL N FI++ A +CL +A H GC L + I +G ++
Sbjct: 479 DHNGHHVIQRCLVNFGVEDNKFIFEGAAANCLNMAVHCHGCFVLQSCI-KARGRYLANLI 537
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I ++ L++ GNYVVQ VL E P + G YV LS + S VV+KCL
Sbjct: 538 MEICLHGFELAQDPFGNYVVQCVLEQEIPSANAHLASLFEGKYVYLSKQQGSSNVVEKCL 597
Query: 253 KY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
+ +A II+EL L+ Q+ D++ NYV +TAL T R ++ LV +
Sbjct: 598 MFFPDDAKAVIIQELLMLSGSDFEQLLQDRFANYVFRTALDHT----RGRLYDVLVEAIL 653
Query: 309 QHLAALRVMKY 319
+ A+R Y
Sbjct: 654 PYENAIRNSPY 664
>gi|344300994|gb|EGW31306.1| hypothetical protein SPAPADRAFT_61876 [Spathaspora passalidarum
NRRL Y-27907]
Length = 465
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 10/298 (3%)
Query: 13 DLFSLAQDQEGSQYLQE--NLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
D+ +L +DQ G ++LQ L G + I+ F + ELM +G ++ K E
Sbjct: 155 DILNLCKDQHGCRFLQRQLELDEGAATII---FQEIYFKIVELMIDPFGNYLIQKLFEHI 211
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q +++ + + F+ S+D G+ +++KLI+ ++ ++ AL+ L
Sbjct: 212 TVEQRIVLVKNASGE---FMKISMDPHGTRALQKLIECISTAEESKL-IIEALQPHIVIL 267
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G+ V+ +CL+ N FI+ A +CL +A H GC L +D+ +R+Q
Sbjct: 268 SRDLNGNHVVQKCLQNLKTSDNQFIFDAVCANCLAIATHRHGCCVLQRCLDHGDPLQRQQ 327
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+ I+ NA L+ GNYVVQ+VLS D I+ I ++ + + LSL K GS V++K
Sbjct: 328 LSLKIAENATKLAIDPFGNYVVQYVLSHGDDKSIEIILNHIKSNTIALSLHKFGSNVIEK 387
Query: 251 CLKYQNAVHYIIEE-LLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
L+ + +IE LLN + ++ ND +GNYV+QT+L D + Q L+ L
Sbjct: 388 SLRINKLSNQLIEVLLLNESRFEELLNDGFGNYVLQTSLDVASPTDLARLSQSLIPLL 445
>gi|302141949|emb|CBI19152.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 137/275 (49%), Gaps = 7/275 (2%)
Query: 54 MSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLP 113
M +G ++ K + CNE Q I+L +T + + S++ G+ V+KL+ +
Sbjct: 1 MMNPFGNYLMQKLFDVCNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTLKTRQ 60
Query: 114 PLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGC 173
+ V+ AL+ F L G+ V+ +CLE F + A ++C+ +A H GC
Sbjct: 61 QISL-VVLALEPYFLDLTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIATHRHGC 119
Query: 174 INLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRG 233
L I G ++++ IS N L++ GNYV+Q+++ L+ P I ++ G
Sbjct: 120 CVLQRCITRSTGKHGEKLVAEISANGLLLAQDDFGNYVIQYIIELKIPSAIASLMSQFEG 179
Query: 234 HYVDLSLTKCGSFVVQKCLKY-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETM 292
+YV LS+ K S VV+KCLK+ + + I+ E L+ Q+ D + NYVIQ+AL T
Sbjct: 180 NYVHLSMQKFSSHVVEKCLKHLEESRPRIVHEFLSVPHFEQLMQDPFANYVIQSALEVT- 238
Query: 293 RQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYKWT 327
+ +H L+ ++ H+ LR Y ++ T
Sbjct: 239 ---KGPLHASLIEAVRPHI-ILRTSPYCKKIFSRT 269
>gi|297852022|ref|XP_002893892.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
gi|297339734|gb|EFH70151.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
Length = 555
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 4/276 (1%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+DQ G + LQ+ + G +F + EL +G ++ K ++ +E Q
Sbjct: 225 MAKDQIGCRVLQKLVKEGTILEAKVIFHEIIDHVVELSMDPFGNYIVQKLLDVSDEEQRT 284
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+I+ +T + + ++ +G+ V+K+IK V + V S LK F L+ G
Sbjct: 285 MIVSVLTLTPRELIKICLNTYGTRVVQKMIKTVKTKQQIAL-VKSGLKPGFLALVNDLNG 343
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
S V+ CLE + F+ +AA ++C +A H GC L + N G + +++ I
Sbjct: 344 SHVLQSCLEFLGPNDTKFVLEAATKYCAEIATHRHGCRVLQCCLINTVGPQNDRLVAEIL 403
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL-KYQ 255
N+ LS+ GNYVVQ + +E + R HY +L+ K S V++KCL KY
Sbjct: 404 RNSHHLSQDPFGNYVVQCL--IEQQVSAVNLLVQFRTHYAELATQKFSSHVIEKCLRKYP 461
Query: 256 NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAET 291
+ I+ ELL+ Q+ D YGNYVIQTAL+ T
Sbjct: 462 ESRAEIVRELLSIPNFEQLLQDPYGNYVIQTALSVT 497
>gi|403224139|dbj|BAM42269.1| RNA-binding protein Puf1 [Theileria orientalis strain Shintoku]
Length = 700
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 149/315 (47%), Gaps = 13/315 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ S+AQDQ G + LQ L D + + + V + LM+ +G ++ K + C+
Sbjct: 223 NVVSIAQDQTGCRMLQRQLECNDHQFIASVLNEVLDNLYMLMTDPFGNYLCQKLMSVCDS 282
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
QL II Q F+ ++ G+ +++KLI+VV + + S L L+
Sbjct: 283 DQLGKIITSCEPQ---FISICLNMHGTRAIQKLIEVVTE--ENITRITSILSTGVVDLVN 337
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL + DFIY+A E+C+YLA H GC + ID ++R +++
Sbjct: 338 DLNGNHVIQKCLVSLSSEHCDFIYKAMNENCVYLATHRHGCCVMQRCIDAASPAQRAKLI 397
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
IS L GNYV+Q+VL L+D + I L + K S VV++CL
Sbjct: 398 DTISSKTLELVEDAYGNYVIQYVLRLKDDAINSRIVAFLCEDVTKFAKQKFSSNVVERCL 457
Query: 253 KY--QNAVHYIIEELLNS--DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
+ +I + LN D + + D +GNYVIQ L + D L+ L+ +Q
Sbjct: 458 IFCPLEVRSTLISKFLNVPFDVLKDLILDPFGNYVIQRVL-NVAQPDELT---SLLDSIQ 513
Query: 309 QHLAALRVMKYGSNV 323
HL L+V G +
Sbjct: 514 PHLEELKVASSGKRI 528
>gi|118425863|gb|ABK90830.1| pumilio-family RNA binding protein [Hortaea werneckii]
Length = 457
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 156/314 (49%), Gaps = 12/314 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ L +DQ G + LQ L D +F V ELM+ +G ++ K + N+
Sbjct: 24 EIYMLCKDQHGCRSLQRKLDERDEPTTHTIFNEVKDHIIELMTDPFGNYLCQKLLGGTND 83
Query: 73 SQ-LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q ALI + ++ L ++ G+ +++K+I+ ++ P ++ AL+ L+
Sbjct: 84 EQRTALIRNAMPAMTKIAL----NQHGTRALQKMIEFIS-TPEQTSMIIDALRYDVVQLI 138
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI CL + FI+ A +C+ + H GC L ID+ G ++ ++
Sbjct: 139 QDLNGNHVIQNCLNHLSSEDAQFIFDAVGANCVTVGTHRHGCCVLQRCIDHASGLQKGRL 198
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + NA SL + GNYVVQ++L L +P + +C + + + V LS K S VV+KC
Sbjct: 199 VDQVIHNAFSLVQDPFGNYVVQYILDLGEPAFTEPLCKSFQKNVVFLSKQKFSSNVVEKC 258
Query: 252 LKYQNA--VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ A +I E++ ++ ++ D + NYV+QTA+ + +D + L+ ++
Sbjct: 259 IRCAGAETKRMLIAEIVAPTELEKLLRDSFANYVVQTAM-DFADEDTKPI---LMGNIRP 314
Query: 310 HLAALRVMKYGSNV 323
+ A+R YG +
Sbjct: 315 MVPAIRSTPYGRRI 328
>gi|237831871|ref|XP_002365233.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|211962897|gb|EEA98092.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
Length = 1618
Score = 114 bits (285), Expect = 6e-23, Method: Composition-based stats.
Identities = 92/313 (29%), Positives = 150/313 (47%), Gaps = 13/313 (4%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+DQ G + LQ LS ++ + V L+ +G ++ K +E C E QL
Sbjct: 1117 IARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEECEEPQLL 1176
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---LLYHVMSALKRLFKFLMMT 133
++ KI + + + G+ +V+KLI+V A LP +++AL+ L
Sbjct: 1177 QLVRKIRPR---LVDICLSPHGTRAVQKLIEVCAGLPAGSAATNELLAALRPSVVLLAKD 1233
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ V+ + L + DF++ ++C+ ++ GC + ID + +IL
Sbjct: 1234 VNANHVVQKILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAAPPRAKSEILQ 1293
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC-- 251
I+ NA L + GNYVVQ VL L+ A+ A+RGH +LS+ K S VV+KC
Sbjct: 1294 EIAANALELMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKCLV 1353
Query: 252 LKYQNAVHYIIEELL-NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
L + I++ELL D + + D Y NYVIQ AL + + Q+L+ +Q
Sbjct: 1354 LGTPEQRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVSSP----AAQQQLLLAIQPC 1409
Query: 311 LAALRVMKYGSNV 323
L+ LR + GS V
Sbjct: 1410 LSQLRQTQPGSRV 1422
>gi|226287941|gb|EEH43454.1| pumilio domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 925
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 145/313 (46%), Gaps = 48/313 (15%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+S+ +DQ G +YLQ+ L + + +F ELM+ +G ++ K +E N+
Sbjct: 523 ELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSND 582
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I +++ +L+K+ L H AL+++ +F+
Sbjct: 583 EQRTALI-------------------NNAAPQLVKIA-----LNQHGTRALQKMIEFIST 618
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ FIY A C+ + H GC L ID+ G +R +++
Sbjct: 619 PE------------------QFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLI 660
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ NA +L + GNYVVQ++L L + I+ IC + RG+ LS K S V++KC+
Sbjct: 661 EQITKNAFTLVQDPFGNYVVQYILDLNERHFIEPICRSFRGNIPALSKQKFSSNVIEKCI 720
Query: 253 KYQNA--VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +IEE+L ++ ++ D + NYV+QTA+ R +L+ ++
Sbjct: 721 RTADNQCRAALIEEMLVPSELEKMLRDSFANYVVQTAMDFADPDSR----NKLIDAIRPI 776
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 777 LPAIRQTPHGRRI 789
>gi|15220219|ref|NP_174813.1| protein pumilio 10 [Arabidopsis thaliana]
gi|313471421|sp|Q9LP21.2|PUM10_ARATH RecName: Full=Putative pumilio homolog 10; Short=APUM-10;
Short=AtPUM10
gi|332193706|gb|AEE31827.1| protein pumilio 10 [Arabidopsis thaliana]
Length = 528
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 157/312 (50%), Gaps = 20/312 (6%)
Query: 17 LAQDQEGSQYLQENLSSG---DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+A+DQ G + LQ+ + G DS+++ F + EL G ++ K + +E
Sbjct: 221 MARDQIGCRALQKLVEEGTVLDSKVI---FLEIIDHVVELSMDPLGNYIVQKLLVVSDEE 277
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +I+ +T + + + ++ G+ ++K+IK V + V SAL+ F L+
Sbjct: 278 QRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIAL-VKSALEPGFLVLVND 336
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G V+ CLE + N F+ +AA E+C LA H+ GC L + N G + ++++
Sbjct: 337 SNGYHVLQSCLEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVA 396
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL- 252
IS ++ LS+ GNYVVQ ++ + + + R H ++L+ K S V++KCL
Sbjct: 397 EISRDSLRLSQDPFGNYVVQCLIDQQVSSV--NLLLPFRTHCIELATQKFSSHVIEKCLR 454
Query: 253 KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
KY + I+ ELL+ Q+ D Y NYVIQTAL+ T + +V RLV K++
Sbjct: 455 KYPESRAEIVRELLSYPNFEQLLQDPYANYVIQTALSVT----KGAVRARLVEKVK---- 506
Query: 313 ALRVMKYGSNVY 324
R K SN Y
Sbjct: 507 --RFGKLQSNPY 516
>gi|401889099|gb|EJT53039.1| hypothetical protein A1Q1_00046 [Trichosporon asahii var. asahii
CBS 2479]
Length = 943
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 153/317 (48%), Gaps = 19/317 (5%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G +YLQ+ L GD D +F G ELM +G ++ K +E E
Sbjct: 433 EILSLCKDQHGCRYLQKKLEEGDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHATE 492
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHL--PPLLYHVMSALKRLFKFL 130
Q + II ++ + S++ G+ +V+K++ +A P + ++ AL L
Sbjct: 493 EQRSAIIDSVSND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVAL 549
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL N FIY A + + +A H GC L ID+ ++R Q
Sbjct: 550 IKDLNGNHVIQKCLNKLIPEDNQFIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRLQ 609
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I N+ L + GNYV+Q++L L D + + G+ L S VV+K
Sbjct: 610 LVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSL----FSSNVVEK 665
Query: 251 CLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTK 306
C++ + ++ E+LN ++ ++ D YGNYVIQT L D + QR LV
Sbjct: 666 CIRVADPEIRKVLVAEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVEC 719
Query: 307 LQQHLAALRVMKYGSNV 323
++ L ++R YG +
Sbjct: 720 IRPILPSIRNTPYGKRI 736
>gi|406699075|gb|EKD02294.1| RNA-binding protein of the pumilio family [Trichosporon asahii var.
asahii CBS 8904]
Length = 943
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 153/317 (48%), Gaps = 19/317 (5%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G +YLQ+ L GD D +F G ELM +G ++ K +E E
Sbjct: 433 EILSLCKDQHGCRYLQKKLEEGDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHATE 492
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHL--PPLLYHVMSALKRLFKFL 130
Q + II ++ + S++ G+ +V+K++ +A P + ++ AL L
Sbjct: 493 EQRSAIIDSVSND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVAL 549
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL N FIY A + + +A H GC L ID+ ++R Q
Sbjct: 550 IKDLNGNHVIQKCLNKLIPEDNQFIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRLQ 609
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I N+ L + GNYV+Q++L L D + + G+ L S VV+K
Sbjct: 610 LVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSL----FSSNVVEK 665
Query: 251 CLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTK 306
C++ + ++ E+LN ++ ++ D YGNYVIQT L D + QR LV
Sbjct: 666 CIRVADPEIRKVLVAEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVEC 719
Query: 307 LQQHLAALRVMKYGSNV 323
++ L ++R YG +
Sbjct: 720 IRPILPSIRNTPYGKRI 736
>gi|302844187|ref|XP_002953634.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300261043|gb|EFJ45258.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 271
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 142/275 (51%), Gaps = 13/275 (4%)
Query: 54 MSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLP 113
M +G ++ K ++ C+E Q L+++ + +L +A ++ G+ +V+KLI+ ++
Sbjct: 1 MMDPFGNYLVQKLLDRCSEQQR----LEVSERGELVTVA-LNTHGTRAVQKLIETLSSRE 55
Query: 114 PLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGC 173
+ AL+ L+ G+ V+ +CL+ + FIY AA+ C+ +A H GC
Sbjct: 56 QRAI-AIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQFIYDAAVAQCVEVATHRHGC 114
Query: 174 INLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRG 233
L ID ++++ ++ I+ +A LS+ GNYVVQ+VL L + ALRG
Sbjct: 115 CVLQRCIDFATPAQKQALVQEIANHALVLSQDAFGNYVVQYVLELGHLETCTQVVSALRG 174
Query: 234 HYVDLSLTKCGSFVVQKCLKYQN---AVHYIIEELLNSDQILQVANDKYGNYVIQTALAE 290
+ LSL K S VV++CLK I+ EL+ + ++ D +GNYVIQ+AL+
Sbjct: 175 SFSSLSLQKFSSNVVERCLKLGGMDAEREAIVRELIAPTSLSRLLQDGFGNYVIQSALSV 234
Query: 291 TMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
T Q +H LV ++ +L LR +G + +
Sbjct: 235 TSGQ----IHNMLVEAIRPYLPTLRGTPHGKRIVQ 265
>gi|254570018|ref|XP_002492119.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|238031916|emb|CAY69839.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|328351394|emb|CCA37793.1| Pumilio homolog 2 [Komagataella pastoris CBS 7435]
Length = 720
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 159/327 (48%), Gaps = 31/327 (9%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G ++LQ+ L G +F ELMS +G ++ K ++ +
Sbjct: 357 EIYSLCKDQHGCRFLQKQLDIGGKNAATMIFNETYLSVIELMSDPFGNYLIQKLLDKVSV 416
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH-------LPPLLYHVMSALKR 125
Q ++ + + F+ ++D G+ +++KL++ + + L HV+S +
Sbjct: 417 DQRITLVKNASSK---FVRIALDPHGTRALQKLVECIDTEEESEIIIDALSSHVVSLSRD 473
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L G+ V+ +CL+ + FI+ A +HC+ +A H GC L +D+
Sbjct: 474 LN--------GNHVVQKCLQKLSSKDCQFIFDATCDHCVEIATHRHGCCVLQRCLDHGSK 525
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLS-------LEDPFLIDAICFALRGHYVDL 238
+ + +S N LS GNYVVQ+VLS + D + I A++ + L
Sbjct: 526 EQCYALSLEVSRNCIPLSFDPFGNYVVQYVLSQNEMIKNINDSKPVANIVAAIKDSIITL 585
Query: 239 SLTKCGSFVVQKCLKYQNAVHYIIEELLNS--DQILQVANDKYGNYVIQTALAETMRQDR 296
SL K GS V++KCLK +I++LL + +I ++ ND YGNYV+QTAL + ++
Sbjct: 586 SLHKFGSNVIEKCLKIPRVSKLVIDQLLETHATKISELLNDPYGNYVLQTALDVSTPEE- 644
Query: 297 LSVHQRLVTKLQQHLAALRVMKYGSNV 323
+RL L+ L +R +G +
Sbjct: 645 ---FERLSELLKPLLPTVRNTPHGKRI 668
>gi|374109827|gb|AEY98732.1| FAGL086Cp [Ashbya gossypii FDAG1]
Length = 735
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 11/282 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
L+SL +DQ G ++LQ L +F + ELM+ +G ++ K +E +
Sbjct: 416 LYSLCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKLVERVSAE 475
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I L + DQ F+ ++D G+ +++KL++ ++ ++++LK L
Sbjct: 476 QR--ITLVKSSADQ-FVSIALDPHGTRALQKLVECISTEEESRI-IIASLKNSVVQLSKD 531
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ + + FI+ AA C+ +A H GC L +D +R Q+
Sbjct: 532 LNGNHVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQRDQLCA 591
Query: 194 LISVNAASLSRHRSGNYVVQHVLS----LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+ N +L+ GNYVVQ++L+ L P I L+ ++LSL K GS VV+
Sbjct: 592 QVLANVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKFGSNVVE 651
Query: 250 KCLKYQNAVHYIIEELLNS---DQILQVANDKYGNYVIQTAL 288
K L+ +I ELL + + Q+ +D +GNYV+QTAL
Sbjct: 652 KILRTSAVAELMISELLATGGQPGVEQLLHDGFGNYVLQTAL 693
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 202 LSRHRSGNYVVQHVL----SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--- 254
LS+ +GN+VVQ L S + F+ DA C V ++ + G V+Q+CL Y
Sbjct: 528 LSKDLNGNHVVQKCLQKFSSADSQFIFDAAC----ADCVKIATHRHGCCVLQRCLDYGSD 583
Query: 255 QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
Q + L N D + D +GNYV+Q L + + ++V L+ + L
Sbjct: 584 QQRDQLCAQVLANVDALTL---DPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIEL 640
Query: 315 RVMKYGSNV 323
+ K+GSNV
Sbjct: 641 SLHKFGSNV 649
>gi|302309271|ref|NP_986580.2| AGL086Cp [Ashbya gossypii ATCC 10895]
gi|299788279|gb|AAS54404.2| AGL086Cp [Ashbya gossypii ATCC 10895]
Length = 735
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 11/282 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
L+SL +DQ G ++LQ L +F + ELM+ +G ++ K +E +
Sbjct: 416 LYSLCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKLVERVSAE 475
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q I L + DQ F+ ++D G+ +++KL++ ++ ++++LK L
Sbjct: 476 QR--ITLVKSSADQ-FVSIALDPHGTRALQKLVECISTEEESRI-IIASLKNSVVQLSKD 531
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +CL+ + + FI+ AA C+ +A H GC L +D +R Q+
Sbjct: 532 LNGNHVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQRDQLCA 591
Query: 194 LISVNAASLSRHRSGNYVVQHVLS----LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+ N +L+ GNYVVQ++L+ L P I L+ ++LSL K GS VV+
Sbjct: 592 QVLANVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKFGSNVVE 651
Query: 250 KCLKYQNAVHYIIEELLNS---DQILQVANDKYGNYVIQTAL 288
K L+ +I ELL + + Q+ +D +GNYV+QTAL
Sbjct: 652 KILRTSAVAELMISELLATGGQPGVEQLLHDGFGNYVLQTAL 693
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 202 LSRHRSGNYVVQHVL----SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--- 254
LS+ +GN+VVQ L S + F+ DA C V ++ + G V+Q+CL Y
Sbjct: 528 LSKDLNGNHVVQKCLQKFSSADSQFIFDAAC----ADCVKIATHRHGCCVLQRCLDYGSD 583
Query: 255 QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
Q + L N D + D +GNYV+Q L + + ++V L+ + L
Sbjct: 584 QQRDQLCAQVLANVDALTL---DPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIEL 640
Query: 315 RVMKYGSNV 323
+ K+GSNV
Sbjct: 641 SLHKFGSNV 649
>gi|255715081|ref|XP_002553822.1| KLTH0E07876p [Lachancea thermotolerans]
gi|238935204|emb|CAR23385.1| KLTH0E07876p [Lachancea thermotolerans CBS 6340]
Length = 710
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 158/319 (49%), Gaps = 13/319 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G ++LQ L G + ++ + ELM+ +G ++ K +E +
Sbjct: 390 NILSLCKDQHGCRFLQRQLDIGGCNAANSIYLETRDYVVELMTDSFGNYLIQKLLERVTD 449
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q ++ Q F+ ++D G+ +++KL++ ++ V+ +L+ L
Sbjct: 450 DQRLELVRSSA---QSFVYIALDPHGTRALQKLVECISTEEEAGI-VVDSLRGSIVELSR 505
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ V+ +CL+ FI+ AA+E C+ +A H GC L +D+ + +Q+
Sbjct: 506 DLNGNHVVQKCLQKLKPEDFQFIFDAAIESCVKIATHRHGCCVLQRCLDHGSKEQFQQLC 565
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPF----LIDAICFALRGHYVDLSLTKCGSFVV 248
I + L+ GNYVVQ++L+ + + I L+ ++LSL K GS VV
Sbjct: 566 EEIIAHVDELATDPFGNYVVQYILTKQTERSASEYTNRIVNILKPKIIELSLHKFGSNVV 625
Query: 249 QKCLKYQNAVHYIIEELLN---SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+K L+ +I ELLN +I Q+ +D YGNYV+QTAL + R++ ++QRL
Sbjct: 626 EKVLRTPVVSELMITELLNRSGDSKIDQLLHDGYGNYVLQTAL-DIARENNKYLYQRLSD 684
Query: 306 KLQQHL-AALRVMKYGSNV 323
L+ L +R +G +
Sbjct: 685 TLKPLLVGPVRNTPHGRRI 703
>gi|428168220|gb|EKX37168.1| hypothetical protein GUITHDRAFT_89808 [Guillardia theta CCMP2712]
Length = 505
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 22/332 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+FSL++DQ G ++LQ+ L LD +F V +LM+ +G ++ K ++ CN
Sbjct: 42 IFSLSRDQLGCRFLQKQLEENTQMSLDIIFSEVIERIVDLMTDPFGNYLCQKLLDYCNPE 101
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--HLP--PLLYHVMSALKRLFKF 129
Q A I+ ++ + S++ G+ + +KLI+ + H P + V++ LK
Sbjct: 102 QRAAIVSRVAPH---LVPISLNIHGTRAAQKLIERLGSDHYPTEAEIQAVVNHLKGGVIQ 158
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
L+ G+ V+ +CL+ N FIY A +HC+ +A H GC +D ++
Sbjct: 159 LIQDLNGNHVVQRCLQKLDAKHNQFIYDAVAQHCILVASHRHGCCVFQRCVDFATPEQKH 218
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH-------YVDLSLTK 242
Q++ + L + + GNYVVQ+VL + FL+ +C + Y + K
Sbjct: 219 QVVMQVVEKTVQLVQDQYGNYVVQYVLE-QVTFLL-LVCASSHSPPTYQVPAYRPNIVQK 276
Query: 243 CGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVH 300
S VV+KCL+ ++ +L +QIL + D Y NYVIQ AL + +L +
Sbjct: 277 FSSNVVEKCLQLASPEGQALMVTQLAQKEQILSLLQDPYANYVIQRAL-QVATSPQLEM- 334
Query: 301 QRLVTKLQQHLAALRVMKYGSNVYKWTTASHP 332
L+ ++ HL+A+R YG + + P
Sbjct: 335 --LLDAIKPHLSAIRNTSYGRKIQSRVSKRCP 364
>gi|403362771|gb|EJY81119.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 1066
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 141/275 (51%), Gaps = 6/275 (2%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
LA+DQ G ++LQ + + ++DK+F +LM+ +G ++ K E+ E QL
Sbjct: 538 LAKDQGGCRFLQRKIEENNREVVDKIFRHTIENFMDLMNDPFGNYLAQKLTETVREDQLT 597
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
II K+ +D + L + G+ S++K+I+ V P + + + LK + L G
Sbjct: 598 EIIHKVQ-EDPVGLCR--NSHGTRSIQKIIETVKS-PAQIELLANYLKEKVQELAEDING 653
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + L +N FIY A +E C+ +ACH+ GC + ID ++ ++ I
Sbjct: 654 NHVIQKILFTWKPAQNQFIYNAMMEKCVEIACHKHGCCVMQKCIDGATPQQKLELTLRIG 713
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ- 255
+ R+ GNYVVQ+VL L+ + I L G + L + K S V++KCL++
Sbjct: 714 DHTQVFVRNPYGNYVVQYVLELKMVEVNQRIGEKLLGSLLLLGMEKFSSNVIEKCLEHNA 773
Query: 256 -NAVHYIIEELLNSDQILQVANDKYGNYVIQTALA 289
N ++ E+L +D D+YGNYVIQ +L+
Sbjct: 774 TNVKEAMVREILQADSFYDFLLDQYGNYVIQKSLS 808
>gi|296809045|ref|XP_002844861.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
gi|238844344|gb|EEQ34006.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
Length = 1069
Score = 110 bits (276), Expect = 7e-22, Method: Composition-based stats.
Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 27/330 (8%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ + +DQ G +YLQ L G + +F ELM+ +G ++ K +E N+
Sbjct: 627 EIYGMCKDQHGCRYLQRKLEEGIPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTND 686
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I + ++++ G+ +++K+I+ ++ P + V++AL L+
Sbjct: 687 EQRTGLI---NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVINALSGQVVELVQ 742
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A + C+ + H GC L ID+ G +R +++
Sbjct: 743 DLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLI 802
Query: 193 HLISVNAASLSRHRSGNYVVQH-----------------VLSLEDPFLIDAICFALRGHY 235
I+ ++ SL + GNYV+Q+ ++ L +P +C +G
Sbjct: 803 EQITKSSYSLVQDPFGNYVIQYICTFASLLLSYIIILTGIVDLGEPLFTGPLCATFQGSI 862
Query: 236 VDLSLTKCGSFVVQKCLKYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMR 293
LS K S V++KC++ N I+E+L ++ + D + NYVIQTA+
Sbjct: 863 PALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLLPHELPNMLRDSFANYVIQTAMDFADP 922
Query: 294 QDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ R L+ ++ L +R +G +
Sbjct: 923 ESR----NTLIEAVRPLLPGIRSQPHGRRI 948
>gi|294654650|ref|XP_456710.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
gi|199429043|emb|CAG84666.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
Length = 808
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSG------------DSRILDKLFWVVSGFT------FELMS 55
++SL +DQ G ++LQ L G +++IL F ELM+
Sbjct: 480 IYSLCKDQHGCRFLQRQLDLGREAASNPNADLENTQILTNDIAATMIFNEIYLKIIELMT 539
Query: 56 GQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL 115
+G ++ K E+ + Q +++ + + F+ ++D G+ +++KLI+ +
Sbjct: 540 DPFGNYLIQKLFENVSADQRIILVKNASPE---FIRIALDPHGTRALQKLIECITTEEES 596
Query: 116 LYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCIN 175
+ S R+ L G+ V+ +CL+ +N FI++ A HC +A H GC
Sbjct: 597 RLIINSLSPRIVA-LSRDLNGNHVVQKCLQRLKPEENQFIFETASLHCNEIATHRHGCCV 655
Query: 176 LNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHY 235
L +D+ ++RKQ+ ++ NA +LS GNYVVQ+VLS D I I ++ +
Sbjct: 656 LQRCLDHGNLAQRKQLSLKVAENATNLSLDPFGNYVVQYVLSRGDDESIRIILDHIKANV 715
Query: 236 VDLSLTKCGSFVVQKCLKYQNAVHYIIEE-LLNSDQILQVANDKYGNYVIQTAL 288
V LSL K GS V++K L+ +I+ LLN ++ ++ ND +GNYV+QT+L
Sbjct: 716 VSLSLHKFGSNVIEKSLRINKLTDSLIDVLLLNKERFSEMLNDAFGNYVLQTSL 769
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVL----SLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
I++ +S +LSR +GN+VVQ L E+ F+ + H +++ + G
Sbjct: 599 IINSLSPRIVALSRDLNGNHVVQKCLQRLKPEENQFIFETASL----HCNEIATHRHGCC 654
Query: 247 VVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
V+Q+CL + N L ++ ++ D +GNYV+Q L+ R D S+ + ++
Sbjct: 655 VLQRCLDHGNLAQRKQLSLKVAENATNLSLDPFGNYVVQYVLS---RGDDESI-RIILDH 710
Query: 307 LQQHLAALRVMKYGSNV 323
++ ++ +L + K+GSNV
Sbjct: 711 IKANVVSLSLHKFGSNV 727
>gi|315048481|ref|XP_003173615.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311341582|gb|EFR00785.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1018
Score = 110 bits (275), Expect = 9e-22, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 19/321 (5%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ + +DQ G +YLQ L G + +F ELM+ +G ++ K +E N+
Sbjct: 589 EIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTND 648
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I + ++++ G+ +++K+I+ ++ P + V+ AL L+
Sbjct: 649 EQRTGLI---NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQ 704
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A + C+ + H GC L ID+ G +R +++
Sbjct: 705 DLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLI 764
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL--------TKCG 244
I+ ++ SL + GNYV+Q++ L I F L GH+ LS K
Sbjct: 765 EQITKSSYSLVQDPFGNYVIQYICRLTSSTWILESLF-LPGHFAQLSREASPALSKQKFS 823
Query: 245 SFVVQKCLKYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
S V++KC++ N I+E+L+ ++ + D + NYVIQTA+ + R
Sbjct: 824 SNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPESR----NT 879
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+ ++ L +R +G +
Sbjct: 880 LIEAVRPLLPGIRSQPHGRRI 900
>gi|213405357|ref|XP_002173450.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001497|gb|EEB07157.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 532
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 165/323 (51%), Gaps = 14/323 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +L DQ G + LQ L S D ++DK+F F LM +G ++ K E N+
Sbjct: 217 ILALCHDQLGCRSLQRVLESNDPLVIDKIFRTTYEFIPNLMVDAFGNYLCQKLFEHANDF 276
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + I+ + + S++ G+ +++K++++V+ LP + V+ +L+ L+
Sbjct: 277 QRTAFVKVISSK---LVPISLNMHGTRALQKVLELVS-LPEQIDCVVKSLQNNVVLLIKD 332
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
G+ VI +CL + + FIY A + + ++ H GC + D+ ++R+ +L
Sbjct: 333 LNGNHVIQKCLNQFSSEDSQFIYSAICRNIVEVSTHRHGCCVVQRCFDHASPAQREMLVL 392
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
H+I V A L + GNYVVQ+VL L++P DA+ LS+ K S V++K L
Sbjct: 393 HIIPV-ALELVQDAFGNYVVQYVLDLKEPVYTDAVIRKFLHKVRMLSVQKFSSNVMEKSL 451
Query: 253 KYQNA--VHYIIEELLNSDQILQVANDKYGNYVIQTAL---AETMRQDRLSVHQRLVTKL 307
+ +I+ELL+ + ++ D++ NYV+QTAL + R + + L++++
Sbjct: 452 SMASDELRALLIDELLDKKHLSRLLKDQFANYVVQTALECASPEQRAKMFASIKPLMSQM 511
Query: 308 QQHLAALRVMKYGSNVYKWTTAS 330
+ A RV+ + + +++ AS
Sbjct: 512 KNIPCARRVL---AKMERYSVAS 531
>gi|190347187|gb|EDK39419.2| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 161/332 (48%), Gaps = 38/332 (11%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG-----------DSRILDKLFWVVSGFTFELMSGQYGRF 61
++++L +DQ G ++LQ L SG S + +F + +LM +G +
Sbjct: 399 EIYNLCKDQHGCRFLQRQLDSGGKENNGHGKEQSSVVATMIFNEIYLKIVDLMVDPFGNY 458
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH-------LPP 114
+ K E + Q +++ + F+ ++D G+ +++KL++ ++ +
Sbjct: 459 LIQKLFEHVSTDQRVILVKNAAPE---FMRIALDSHGTRALQKLVECISTEEESQLLIKS 515
Query: 115 LLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
L HV+ AL R G+ V+ +CL+ N FI+ A HC +A H GC
Sbjct: 516 LSPHVV-ALSRDLN-------GNHVVQKCLQRLSAANNQFIFDTAAFHCNEIATHRHGCC 567
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
L +D+ ++R Q+ ++ NA +LS GNYVVQ+VL+ D I+ + +R +
Sbjct: 568 VLQRCLDHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNN 627
Query: 235 YVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL-NSDQILQVANDKYGNYVIQTALAETMR 293
V LSL K GS V++K L+ +IE LL N + + ND YGNYV+QT+L
Sbjct: 628 IVTLSLHKFGSNVIEKSLRISTLTDTLIEVLLANQARFADMLNDAYGNYVLQTSL----- 682
Query: 294 QDRLSVH--QRLVTKLQQHLAALRVMKYGSNV 323
D SV ++L LQ L +++ +G +
Sbjct: 683 -DVASVGDLRKLSDVLQPLLPSIKNTPHGRRI 713
>gi|159471610|ref|XP_001693949.1| puf protein [Chlamydomonas reinhardtii]
gi|158277116|gb|EDP02885.1| puf protein [Chlamydomonas reinhardtii]
Length = 273
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 142/276 (51%), Gaps = 13/276 (4%)
Query: 54 MSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLA-SVDKFGSSSVKKLIKVVAHL 112
M +G ++ K ++ C+E Q L+++ + L++ +++ G+ +V+KLI+ ++
Sbjct: 1 MVDPFGNYLVQKLLDRCSEQQR----LEVSGDRRGELVSVALNTHGTRAVQKLIETLSSR 56
Query: 113 PPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQG 172
+ AL+ L+ G+ V+ +CL+ + FIY AA+ C+ +A H G
Sbjct: 57 EQRAI-AIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQFIYDAAVACCVEVATHRHG 115
Query: 173 CINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
C L ID +++ ++ ++ +A LS+ GNYVVQ+VL L A+ ALR
Sbjct: 116 CCVLQRCIDFATPGQKQALVMEVARHALVLSQDAFGNYVVQYVLELGHLDSCAAVVVALR 175
Query: 233 GHYVDLSLTKCGSFVVQKCLKYQN---AVHYIIEELLNSDQILQVANDKYGNYVIQTALA 289
G + LSL K S VV++CLK I+ EL+ + + ++ D YGNYVIQ+AL+
Sbjct: 176 GSFCSLSLQKFSSNVVERCLKLGGLDAERELIVRELIQPNNLSRLLQDGYGNYVIQSALS 235
Query: 290 ETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
T + H LV ++ +L LR +G + +
Sbjct: 236 VTSG----TTHGLLVEAIKPYLPTLRGTPHGKRIVQ 267
>gi|50552736|ref|XP_503778.1| YALI0E10395p [Yarrowia lipolytica]
gi|49649647|emb|CAG79369.1| YALI0E10395p [Yarrowia lipolytica CLIB122]
Length = 566
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 162/317 (51%), Gaps = 22/317 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
N D+F+L +DQ G +YLQ L + L+ +F ELM+ +G ++ K +E+C
Sbjct: 257 NCDIFALCKDQHGCRYLQRKLEE-EPYYLNLIFEQTHSHVVELMTDPFGNYLCQKLLENC 315
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+ +Q ++I T L +A +++ G+ +++K+I V + + ++ AL+R L
Sbjct: 316 SVAQTTVLIR--TAAPSLVQVA-LNQHGTRALQKMIDYVTNDEQIEI-IVQALERNVVRL 371
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +CL + +FIY+A ++ + +A H GC L +D +R+
Sbjct: 372 IQDLNGNHVIQKCLNRLNSCDTNFIYRAVSQNLVVVATHRHGCCVLQRCVDYADVLQREM 431
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ +I+ +A L GNYV Q+VL + + GH V LS+ K S V++K
Sbjct: 432 LIGVITKHALQLVCDPFGNYVTQYVLG-------EQVIRQFVGHVVALSMQKFSSNVIEK 484
Query: 251 CLKYQN----AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
LK + AV +I E+ S + ++ +D YGNYV+QTAL + R +L+ +
Sbjct: 485 SLKVASYELRAV--LIAEICASPLLPKLLSDCYGNYVVQTALDTANQYTRA----QLIDR 538
Query: 307 LQQHLAALRVMKYGSNV 323
++ L +R YG +
Sbjct: 539 IRPVLPMIRQTPYGRRI 555
>gi|449018917|dbj|BAM82319.1| probable serine rich pumilio family rna binding domain pr otein
[Cyanidioschyzon merolae strain 10D]
Length = 910
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 145/328 (44%), Gaps = 31/328 (9%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+DQ+G +YLQ L ++ +F EL +G ++ K E CN Q
Sbjct: 569 MARDQQGGRYLQARLDVKNAADTALIFEECRPHFVELAMDPFGNYLCQKLFEHCNREQRL 628
Query: 77 LIILKITFQDQLFLLASV--DKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK 134
+I + Q LA V D G+ V+K+I++ P + A+ LM
Sbjct: 629 ELIRQSASQ-----LAQVCMDPHGTRVVQKMIELTVE-PEHAALIAQAISPHCLSLMCDV 682
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 194
G+ VI +CL+ FIY AL L +A H GC L +D+ +R + L
Sbjct: 683 NGNHVIQRCLQRMDVPLRRFIYDTALTRYLEIARHRHGCCVLQRCLDHATAEQRSNLCAL 742
Query: 195 ISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY 254
I +A L + GNYVVQ+VL L++P AI +RGH LS+ K S VV+K
Sbjct: 743 ILNSAYELMQDPFGNYVVQYVLELKEPSYTRAIIQRIRGHLWQLSMQKFSSNVVEKVFTM 802
Query: 255 QNA--VHYIIEELLNSDQ-----ILQVAN------------DKYGNYVIQTALAETMRQD 295
N + ++ ELL Q LQV + D Y NYV+Q AL+
Sbjct: 803 ANERDLRSLLHELLEGPQSVESMPLQVGSEQHQRNIRPLLFDPYANYVVQRALSLAPS-- 860
Query: 296 RLSVHQRLVTKLQQHLAALRVMKYGSNV 323
V + L +Q HLA LR +G +
Sbjct: 861 --PVFEALREAIQPHLAELRGTPFGKRI 886
>gi|356518120|ref|XP_003527730.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 508
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 151/315 (47%), Gaps = 6/315 (1%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
LA DQ + LQE + +F + +LM +G +V + +E C E QL+
Sbjct: 189 LATDQHECRTLQETMRKLTREEFYIIFLELINHVTDLMVDPFGNYVVQRMVEICTEEQLS 248
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
I+L + + + + G V+KL++ V V+SAL L G
Sbjct: 249 QIVLSLAQCNFQLVRICLSAHGIRGVEKLLERVTTQEQRDL-VLSALCPGAAILAKDVNG 307
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
V+L CL+ N+ + C +A + GC+ L I++ +G ++++L I
Sbjct: 308 HRVLLHCLKQFSGEDNENLLNVVANKCFEIATDKTGCVVLQQCINHAQGETKQKLLDAII 367
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
++ + L+ GNYVVQH+LSL+ P + +++ L+G + L+ K GS VV++ L+
Sbjct: 368 LHVSLLAEDCYGNYVVQHLLSLKVPGVAESLLIQLKGRFFYLACNKYGSNVVERFLQDSG 427
Query: 257 AVH--YIIEELLNSDQILQVANDKYGNYVIQTAL-AETMRQDRLSVH--QRLVTKLQQHL 311
H I+ ELL++ + + D YGNYVI++AL A + + L H RL ++ +
Sbjct: 428 EKHSTSIVLELLHNPNVAMLLVDPYGNYVIKSALSASKLLKVELQGHVRNRLERLIKLNS 487
Query: 312 AALRVMKYGSNVYKW 326
+R YG + W
Sbjct: 488 LIMRSNLYGKKLLAW 502
>gi|15238618|ref|NP_200819.1| pumilio 18 [Arabidopsis thaliana]
gi|75335543|sp|Q9LVG3.1|PUM18_ARATH RecName: Full=Pumilio homolog 18; Short=APUM-18; Short=AtPUM18
gi|8777350|dbj|BAA96940.1| unnamed protein product [Arabidopsis thaliana]
gi|67633898|gb|AAY78873.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332009896|gb|AED97279.1| pumilio 18 [Arabidopsis thaliana]
Length = 327
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 144/276 (52%), Gaps = 8/276 (2%)
Query: 51 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
F LM+ G F + I + ++++L + +T F+ KFGS V+KL+
Sbjct: 46 FNLMTDGDGVSYFKEMISNSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD 105
Query: 111 HLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
+ +A+ R F + K S V ++ + +Y+ L H L LAC +
Sbjct: 106 DVDAFF---CAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQ 162
Query: 171 QGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
GCI LN+ I + R Q+L L++ NA LS SGN+VVQHVL+L D I I
Sbjct: 163 HGCIALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCIHNIAV 222
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTA 287
L G ++LS K GS++V+K L+ + ++ ++ ELL + D+++++A +++GN+V+ A
Sbjct: 223 NLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKA 282
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L T + R+ + LV KL + LR +GSN+
Sbjct: 283 LRFT-KMSRMDLFWGLVQKLMPFIRLLR-RSHGSNI 316
>gi|357445491|ref|XP_003593023.1| Pumilio homology domain family member [Medicago truncatula]
gi|355482071|gb|AES63274.1| Pumilio homology domain family member [Medicago truncatula]
Length = 454
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 150/324 (46%), Gaps = 15/324 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE- 72
+ S+A + QYLQ + G+ + + V + ELM+ ++G ++ K ++
Sbjct: 109 VVSMAMNHRECQYLQAVIDEGNPVYVTMILLEVKDYLHELMTHRFGSYLIQKIFQARRGM 168
Query: 73 --SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q+ L + I + +D G+ +++ +I V H P Y V+ L+ + L
Sbjct: 169 TCQQMDLTVFLIISNHRKLKDVCMDHHGTRAMQTMIANVRH-PFTGYVVVYMLQHITIPL 227
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
M GS VI+QC++ I +C+ +A + GC + +D G R
Sbjct: 228 MKNVNGSYVIVQCVKFFPPKHKKIILDEVARNCVDIATDKIGCSAVKKCLD--YGGRTSA 285
Query: 191 ILHLIS---VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
I L++ NA LS GNYVVQ V+ ++ P + + LR + LS+ K S V
Sbjct: 286 IDILVAQIISNAMILSEDPYGNYVVQRVIQMKIPLANEQMVQELRSKFDRLSVNKYASNV 345
Query: 248 VQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
V+ L + Q+AV I EE++ S L V +D YGNYV Q AL R + V +R +
Sbjct: 346 VEYLLSFSNQDAVKVIAEEIMRSRNFLNVLHDPYGNYVAQRAL----RCTKGHVRRRFSS 401
Query: 306 KLQQHLAALRVMKYGSNVYKWTTA 329
++ H AL+ YG NV A
Sbjct: 402 LIKSHRLALQSHIYGKNVLTLAMA 425
>gi|297797465|ref|XP_002866617.1| hypothetical protein ARALYDRAFT_919767 [Arabidopsis lyrata subsp.
lyrata]
gi|297312452|gb|EFH42876.1| hypothetical protein ARALYDRAFT_919767 [Arabidopsis lyrata subsp.
lyrata]
Length = 415
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 121/245 (49%), Gaps = 10/245 (4%)
Query: 59 GRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYH 118
G F I N +L ++ K+T + F+ DK GS V++L +L
Sbjct: 95 GSTEFNDMILRNNGRELHGVVSKLTSESDYFVEIVSDKEGSRRVRRLFGKFHQTDEIL-- 152
Query: 119 VMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNN 178
++A+ R F +M K V + + S + + + L LY A E GCI LN
Sbjct: 153 -LNAIVRRFIDIMTGKYSYLVAITAFKVSESFE---LVSLTLRDALYFASDEIGCIALNQ 208
Query: 179 FIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDL 238
I R + H IS NA LS SGN+VVQHVL+ D + + F L G+YV+L
Sbjct: 209 IITESNNIFRYEFFHEISENADWLSMDDSGNFVVQHVLNFHDLECTNRVAFRLCGYYVEL 268
Query: 239 SLTKCGSFVVQKCLKYQN--AVHYIIEELLNSD--QILQVANDKYGNYVIQTALAETMRQ 294
S + GS++V++ L+ + A+ ++ EL+ + ++A D +GNYV+Q AL T RQ
Sbjct: 269 SFERRGSYIVEQILESGSMIALDLVVSELMECGGFTLWRLAQDAFGNYVVQKALRVTRRQ 328
Query: 295 DRLSV 299
R+ +
Sbjct: 329 GRVDL 333
>gi|297796877|ref|XP_002866323.1| hypothetical protein ARALYDRAFT_919157 [Arabidopsis lyrata subsp.
lyrata]
gi|297312158|gb|EFH42582.1| hypothetical protein ARALYDRAFT_919157 [Arabidopsis lyrata subsp.
lyrata]
Length = 324
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 12/278 (4%)
Query: 42 LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSS 101
L W+ F F S RF + I + L + +T F++ + +++GS S
Sbjct: 37 LRWM---FNFMTRSEDVPRF--KELISVLDTRTLMWMASSLTSDSNYFMVIARNQYGSKS 91
Query: 102 VKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALE 161
+++L+ + + + A+ RLF ++M K S V ++ + K + +Y+ L+
Sbjct: 92 IQRLMGMSDDVDVFFFE---AIMRLFLYVMTDKYASYVAIKGMRVFQQDKRELMYEHILQ 148
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLSLED 220
+ LYLA + GCI LN I ++ R Q+L +++ NA LS GN+VVQHVL L D
Sbjct: 149 NALYLARDQHGCIALNEIITDLDDPYYRNQLLDIVANNALLLSNDAYGNFVVQHVLKLRD 208
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAV-HYIIEELL--NSDQILQVAND 277
I L GH V+LS K GS++V++ L+ ++V ++ +LL + ++++A
Sbjct: 209 FRCTRNIADNLCGHCVELSFKKYGSYIVERLLEVGDSVMELVVMDLLACKREMLMRLARS 268
Query: 278 KYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALR 315
+YGN+V+ AL T + LV KL + LR
Sbjct: 269 EYGNFVVYNALDLTKDILTADLFYGLVRKLMPYRHLLR 306
>gi|102140025|gb|ABF70156.1| pumilio/Puf RNA-binding domain-containing protein [Musa acuminata]
Length = 1129
Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats.
Identities = 93/297 (31%), Positives = 142/297 (47%), Gaps = 17/297 (5%)
Query: 24 SQYLQENLSSGDSRILDKLFWVVSGF----TFELMSGQYGRFVFGKFIESCNESQLALII 79
S+ QE L + I K V++GF +++M G K + ++ Q +
Sbjct: 799 SRCFQEFLDGREPEITQK---VLAGFLRCSVYDMMMDCRGSDFILKLLHVADDVQRRQME 855
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSV 139
+ ++ L + D GS VK+L+K+ L + V ALK K LM K G SV
Sbjct: 856 DYVRKDHRMLLKVAKDSSGSECVKELVKI------LKFPVGKALKCHVKQLMTCKNGKSV 909
Query: 140 ILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 199
+ CLE N QAAL+ LA + GC+ L + +D R +L + A
Sbjct: 910 VDCCLEHLNYEANKVFIQAALDSFTDLASDKCGCLALVSCMDYSTNPHRNLLLKKTTAGA 969
Query: 200 ASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH 259
+LS H GNYVVQ L++ + + IC L G ++LS+ K GS+VVQ+CL+ + H
Sbjct: 970 LALSCHIYGNYVVQCALNMNVAWAAETICADLAGSLMELSVHKNGSYVVQRCLE-SSGRH 1028
Query: 260 YIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
+II L L+ + + Y NYV++TALA + LS H + L+ L A+
Sbjct: 1029 HIIRGLDCLSQGDLEDMLQHYYANYVLKTALA-FFKVKPLSPHNPSLAPLKLSLTAI 1084
>gi|146416333|ref|XP_001484136.1| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 160/332 (48%), Gaps = 38/332 (11%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG-----------DSRILDKLFWVVSGFTFELMSGQYGRF 61
++++L +DQ G ++LQ L G S + +F + +LM +G +
Sbjct: 399 EIYNLCKDQHGCRFLQRQLDLGGKENNGHGKEQSSVVATMIFNEIYLKIVDLMVDPFGNY 458
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH-------LPP 114
+ K E + Q +++ + F+ ++D G+ +++KL++ ++ +
Sbjct: 459 LIQKLFEHVSTDQRVILVKNAAPE---FMRIALDSHGTRALQKLVECISTEEESQLLIKS 515
Query: 115 LLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
L HV+ AL R G+ V+ +CL+ N FI+ A HC +A H GC
Sbjct: 516 LSPHVV-ALSRDLN-------GNHVVQKCLQRLSAANNQFIFDTAAFHCNEIATHRHGCC 567
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
L +D+ ++R Q+ ++ NA +LS GNYVVQ+VL+ D I+ + +R +
Sbjct: 568 VLQRCLDHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNN 627
Query: 235 YVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL-NSDQILQVANDKYGNYVIQTALAETMR 293
V LSL K GS V++K L+ +IE LL N + + ND YGNYV+QT+L
Sbjct: 628 IVTLSLHKFGSNVIEKSLRISTLTDTLIEVLLANQARFADMLNDAYGNYVLQTSL----- 682
Query: 294 QDRLSVH--QRLVTKLQQHLAALRVMKYGSNV 323
D SV ++L LQ L +++ +G +
Sbjct: 683 -DVASVGDLRKLSDVLQPLLPSIKNTPHGRRI 713
>gi|224056214|ref|XP_002298759.1| predicted protein [Populus trichocarpa]
gi|222846017|gb|EEE83564.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 5/265 (1%)
Query: 27 LQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQD 86
LQ L +++ +F V + +LM Q+G V K E C+E+Q+ +IL +
Sbjct: 310 LQGVLDERKPDLIEMIFLEVKDYVHDLMEDQFGNHVIQKLFEVCSEAQMTQLILSLIHNQ 369
Query: 87 QLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEP 146
+ L G+ +++K+I+ + P + L R L + G VI +CLE
Sbjct: 370 RRLLGLCFHLVGTRAMQKMIEHIK-TPKQRLLLTQVLIRRTVILSQNQNGYHVIQKCLEH 428
Query: 147 -SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 205
++ I + A E L +A + GC LN +D +G + +L NA LS
Sbjct: 429 FPFDDIKPLIKEIA-ESFLDIAMDKSGCCVLNRALDCAQGELKHLLLLETIANAMLLSES 487
Query: 206 RSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIE 263
GNYVVQHVL I L+G++V LS+ K GS VV+KCL + + IIE
Sbjct: 488 PYGNYVVQHVLDERIQHATIGILEKLKGYFVSLSMNKFGSNVVEKCLIWSGEENASMIIE 547
Query: 264 ELLNSDQILQVANDKYGNYVIQTAL 288
E ++S + + + +GNYV+Q AL
Sbjct: 548 EFMHSPYFVNICRNNFGNYVVQKAL 572
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 164 LYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAAS-LSRHRSGNYVVQHVLSLEDPF 222
L L H G + I+++K +++ +L + + LS++++G +V+Q L PF
Sbjct: 373 LGLCFHLVGTRAMQKMIEHIKTPKQRLLLTQVLIRRTVILSQNQNGYHVIQKCLE-HFPF 431
Query: 223 L-IDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAV--HYIIEELLNSDQILQVANDKY 279
I + + ++D+++ K G V+ + L H ++ E + + +L + Y
Sbjct: 432 DDIKPLIKEIAESFLDIAMDKSGCCVLNRALDCAQGELKHLLLLETIANAMLL--SESPY 489
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GNYV+Q L E ++ + + + KL+ + +L + K+GSNV
Sbjct: 490 GNYVVQHVLDERIQHATIGI----LEKLKGYFVSLSMNKFGSNV 529
>gi|221486916|gb|EEE25162.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 685
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 12/310 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+DQ G + LQ LS ++ + V L+ +G ++ K +E C E QL
Sbjct: 189 IARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEECEEPQLL 248
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ KI + + + G+ +V+KLI+ +++AL+ L
Sbjct: 249 QLVRKIRPR---LVDICLSPHGTRAVQKLIEPAGSA--ATNELLAALRPSVVLLAKDVNA 303
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ + L + DF++ ++C+ ++ GC + ID + +IL I+
Sbjct: 304 NHVVQKILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAAPPRAKSEILQEIA 363
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC--LKY 254
NA L + GNYVVQ VL L+ A+ A+RGH +LS+ K S VV+KC L
Sbjct: 364 ANALELMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKCLVLGT 423
Query: 255 QNAVHYIIEELL-NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAA 313
+ I++ELL D + + D Y NYVIQ AL + + Q+L+ +Q L+
Sbjct: 424 PEQRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVSS----PAAQQQLLLAIQPCLSQ 479
Query: 314 LRVMKYGSNV 323
LR + GS V
Sbjct: 480 LRQTQPGSRV 489
>gi|358345510|ref|XP_003636820.1| Pumilio domain-containing protein [Medicago truncatula]
gi|358348879|ref|XP_003638469.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355502755|gb|AES83958.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355504404|gb|AES85607.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 679
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 137/279 (49%), Gaps = 7/279 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++SLA+D GS+ LQE + + + F + ELM G V K +E CN+
Sbjct: 216 VYSLAKDTHGSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYEVITKMVEVCNQD 275
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLI-KVVAHLPPLLYHVMSALKRLFKFLMM 132
Q I+L +T F+ + GS SV+KL+ KV L +MSAL L
Sbjct: 276 QKTQIVLLVTHHGAQFIRICLSLHGSRSVEKLLEKVTTREQRGL--IMSALTPGAIVLSK 333
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G V+ CL+ + + + L L+ + GC L + + +G+ + ++
Sbjct: 334 DINGHRVVFNCLKNFPHADTEKFLGVIARNSLSLSRDKTGCCVLQYCVSHAQGATKNLLI 393
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
H I ++A L+ GNYV+QH++SL+ P + + L+ +V LS K GS VV+K L
Sbjct: 394 HEIILHAPLLAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSCNKYGSNVVEKFL 453
Query: 253 KYQNAVHY---IIEELLNSDQILQVANDKYGNYVIQTAL 288
+ + V II ELLN + ++ D YGN+VI TAL
Sbjct: 454 -HDSGVDISSCIIIELLNDPNVTRLLTDPYGNFVISTAL 491
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+R I+ ++ A LS+ +G+ VV + L + + + + LS K G
Sbjct: 316 QRGLIMSALTPGAIVLSKDINGHRVVFNCLKNFPHADTEKFLGVIARNSLSLSRDKTGCC 375
Query: 247 VVQKCLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
V+Q C+ + + +I E++ +L A D YGNYVIQ ++ + +V L
Sbjct: 376 VLQYCVSHAQGATKNLLIHEIILHAPLL--AEDCYGNYVIQHLISLKIP----TVSGNLH 429
Query: 305 TKLQQHLAALRVMKYGSNV 323
+LQQ +L KYGSNV
Sbjct: 430 HQLQQQFVSLSCNKYGSNV 448
>gi|84996421|ref|XP_952932.1| pumilio-family RNA-binding protein [Theileria annulata strain
Ankara]
gi|65303929|emb|CAI76308.1| pumilio-family RNA-binding protein, putative [Theileria annulata]
Length = 830
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 21/319 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ S+AQDQ G + LQ L D+ + V F LM+ +G ++ K + C+
Sbjct: 266 NVASIAQDQTGCRMLQRQLECNDTVFTTAVLGEVLDNLFLLMTDPFGNYLCQKLMSVCDS 325
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
QL II Q F+ ++ G+ +++KLI+VV+ + + + L L+
Sbjct: 326 EQLGQIITACEPQ---FIPICLNMHGTRAIQKLIEVVSGTN--VGRITAILSAGVVELIN 380
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL + + +FIY+A EHC+ LA H GC + ID +R +++
Sbjct: 381 DLNGNHVIQKCLVALSSDECEFIYKAMNEHCVGLATHRHGCCVMQRCIDAASVPQRARLV 440
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ L GNYV+Q+VL L D + I L S K S VV++CL
Sbjct: 441 DTIAAKTLELVEDAYGNYVIQYVLRLRDDAVNARIVALLCEDLTRFSKHKFSSNVVERCL 500
Query: 253 KY--QNAVHYIIEELLN------SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
+ + ++ LN D IL D +GNYVIQ L + D L+ +L+
Sbjct: 501 IFCPSSVRSNLVSRFLNLPFTVLHDLIL----DPFGNYVIQRVL-NVAQPDELA---QLL 552
Query: 305 TKLQQHLAALRVMKYGSNV 323
+Q HL L+++ G +
Sbjct: 553 DIIQPHLEELKLVSSGKRI 571
>gi|448114573|ref|XP_004202611.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359383479|emb|CCE79395.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 150/306 (49%), Gaps = 45/306 (14%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGD----------------------SRILDKLFWVVSGFT 50
++ SL +DQ G ++LQ L G S I ++++ +
Sbjct: 496 EILSLCKDQHGCRFLQRQLDMGREVSEKPTGELSKANILPNDVAASMIFNEIYLKI---- 551
Query: 51 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
ELM+ +G ++ K E+ + Q +++ + + F+ ++D G+ +++KL++ +
Sbjct: 552 VELMTDPFGNYLIQKLFENVSTDQRIILVKNSSPE---FIKIALDTHGTRALQKLVECIT 608
Query: 111 H-------LPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHC 163
+ L H++S + L G+ V+ +CL+ +N FI+ A +C
Sbjct: 609 TEEEGRIIIESLSPHIVSLSRDLN--------GNHVVQKCLQKLKPSENQFIFDTASMYC 660
Query: 164 LYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFL 223
+A H GC L +D+ +RKQ+ ++ NA +LS GNYVVQ+VLS D
Sbjct: 661 NEIATHRHGCCVLQRCLDHGNAEQRKQLSLEVAENATNLSLDPFGNYVVQYVLSRGDEHS 720
Query: 224 IDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL-NSDQILQVANDKYGNY 282
I I ++ + + LSL K GS V++K L+ +I+ LL N ++ ++ ND +GNY
Sbjct: 721 ISLIMDHIKNNIITLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELLNDAFGNY 780
Query: 283 VIQTAL 288
V+QT+L
Sbjct: 781 VLQTSL 786
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVL----SLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
I+ +S + SLSR +GN+VVQ L E+ F+ D + +++ + G
Sbjct: 616 IIESLSPHIVSLSRDLNGNHVVQKCLQKLKPSENQFIFDTASM----YCNEIATHRHGCC 671
Query: 247 VVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
V+Q+CL + NA L ++ ++ D +GNYV+Q L+ R D S+ ++
Sbjct: 672 VLQRCLDHGNAEQRKQLSLEVAENATNLSLDPFGNYVVQYVLS---RGDEHSI-SLIMDH 727
Query: 307 LQQHLAALRVMKYGSNV 323
++ ++ L + K+GSNV
Sbjct: 728 IKNNIITLSLHKFGSNV 744
>gi|410080980|ref|XP_003958070.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
gi|372464657|emb|CCF58935.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
Length = 807
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 139/288 (48%), Gaps = 21/288 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G ++LQ+ L D +F T ELM+ +G ++ K IE
Sbjct: 486 NIYSLCKDQHGCRFLQKQLDVLGKYAADAIFEETKDHTIELMTDSFGNYLIQKLIERVTT 545
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLF 127
Q + I KI + F+ +++ G+ +++KLI+ + A++ ++ ALK
Sbjct: 546 EQ-RIEIAKIASPE--FVDIALNSHGTRALQKLIECISTAEEANI------IIEALKPAV 596
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
L M G+ V+ +CLE FI+ A+ C+ +A H GC L +D+ +
Sbjct: 597 VRLSMDLNGNHVVQKCLEKLEPKDFQFIFDLAIGDCIDIATHRHGCCVLQRCLDHGTKEQ 656
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLE----DPFLIDAICFALRGHYVDLSLTKC 243
+ + N L+ GNYVVQ++L+ E D I L+ +LSL K
Sbjct: 657 TTSLCDQLLTNLDKLTLDPFGNYVVQYILTKEAEKQDYEYTYKIVNLLKPKLAELSLHKF 716
Query: 244 GSFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTAL 288
GS V++K LK II EL+ D I + ND YGNYV+QTAL
Sbjct: 717 GSNVIEKLLKTNVVSESIIAELVKEDGKSDIESLLNDSYGNYVLQTAL 764
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
I+ + LS +GN+VVQ L +P I G +D++ + G V+Q+
Sbjct: 588 IIEALKPAVVRLSMDLNGNHVVQKCLEKLEPKDFQFIFDLAIGDCIDIATHRHGCCVLQR 647
Query: 251 CLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CL + + + ++LL + L + D +GNYV+Q L + + ++V L+
Sbjct: 648 CLDHGTKEQTTSLCDQLLTNLDKLTL--DPFGNYVVQYILTKEAEKQDYEYTYKIVNLLK 705
Query: 309 QHLAALRVMKYGSNV 323
LA L + K+GSNV
Sbjct: 706 PKLAELSLHKFGSNV 720
>gi|218192238|gb|EEC74665.1| hypothetical protein OsI_10341 [Oryza sativa Indica Group]
Length = 671
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 142/305 (46%), Gaps = 45/305 (14%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ G + D +F + ELM+ + ++ K ++ C+E
Sbjct: 396 IYFMAKDQNGCRFLQQKFEEGKDQA-DLIFEGIIDHIPELMANSFANYLVQKLLDVCDEE 454
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q II +T L S++ G+ S++KLI+ V ++ ++SAL+ F L+
Sbjct: 455 QRLRIIAILTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIML-IISALQPGFIHLVND 513
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ +N IY H K L+
Sbjct: 514 PNGNHVIQKCLKNFDAEENKIIYDGTDTHY-------------------------KNSLN 548
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+++ NYV+Q+VL L+ PF + +G+YV LS K GS VV+KCLK
Sbjct: 549 VLT------------NYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNVVEKCLK 596
Query: 254 Y--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ II EL+++ Q+ D Y NYVI TALA+T R + LV + H
Sbjct: 597 VFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALAQT----RGHLRSALVNAILPHE 652
Query: 312 AALRV 316
A+R
Sbjct: 653 EAIRT 657
>gi|19115035|ref|NP_594123.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|2842704|sp|Q92359.1|YDHE_SCHPO RecName: Full=Pumilio domain-containing protein C6G9.14
gi|1644326|emb|CAB03616.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 681
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 155/326 (47%), Gaps = 14/326 (4%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
N ++ S +DQ G +YLQ L + +D +F + LM +G ++ K E
Sbjct: 345 NSNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHA 404
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+E+Q + I I + + S + G+ +++K+I +V+ P + +++AL+ L
Sbjct: 405 SEAQRSTFIQIIAPK---LVPISFNMHGTRALQKIIDLVSS-PDQISCIVNALRPNVVLL 460
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G+ VI +CL FI+ A E L ++ H GC + D+ ++ +Q
Sbjct: 461 TKDLNGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQ 520
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I +A +L + GNYV+Q+VL L +P +AI LS K S V++K
Sbjct: 521 LVEHIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEK 580
Query: 251 CLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTK 306
C+ + A +I EL++ + ++ D + NYVIQTAL D SV QR LV +
Sbjct: 581 CIFFAPAAIKEKLISELMDEKHLPKLLRDSFANYVIQTAL------DNASVKQRAELVER 634
Query: 307 LQQHLAALRVMKYGSNVYKWTTASHP 332
++ + +++ G + HP
Sbjct: 635 IKPLIPSIKNTPCGRRILSKLERRHP 660
>gi|367015510|ref|XP_003682254.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
gi|359749916|emb|CCE93043.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
Length = 823
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 22/304 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G ++LQ+ L S D +F T ELM+ +G ++ K +E
Sbjct: 503 NIHSLCKDQHGCRFLQKQLDILGSEAADSIFEETKNHTVELMTDSFGNYLIQKLLERVTV 562
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLF 127
Q + + KI F+ + + G+ +++KL++ + A++ ++ +LK
Sbjct: 563 EQR-ITLAKIAAPH--FVYIASNPHGTRALQKLVECIGSKEEANI------IIGSLKGSV 613
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
L G+ ++ +CL+ + FI+ AA EHC +A H GC L +D+ +
Sbjct: 614 VELSKDLNGNHIVQKCLQKLQPNDVQFIFDAASEHCTEIATHRHGCCVLQRCLDHGDEVQ 673
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLE----DPFLIDAICFALRGHYVDLSLTKC 243
R+++ + N L+ GNYVVQ++++ E + + I AL+ +LSL K
Sbjct: 674 RQRLCDKLLSNIDHLTLDPFGNYVVQYIITKESESGNNYFTLKIVQALKSKVTELSLHKF 733
Query: 244 GSFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQDRLSVH 300
GS V++K L+ +I ELL+S I + ND YGNYV+QT L + Q+ +H
Sbjct: 734 GSNVIEKILRTPAVSDDLITELLSSRAEADIQALLNDGYGNYVLQTML-DVTHQNNHYLH 792
Query: 301 QRLV 304
+ LV
Sbjct: 793 ESLV 796
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
Query: 159 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ--ILHLISVNAASLSRHRSGNYVVQHVL 216
A H +Y+A + G L ++ + GS+ + I+ + + LS+ +GN++VQ L
Sbjct: 572 AAPHFVYIASNPHGTRALQKLVECI-GSKEEANIIIGSLKGSVVELSKDLNGNHIVQKCL 630
Query: 217 SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQILQV 274
P + I A H +++ + G V+Q+CL + + V + ++LL++ I +
Sbjct: 631 QKLQPNDVQFIFDAASEHCTEIATHRHGCCVLQRCLDHGDEVQRQRLCDKLLSN--IDHL 688
Query: 275 ANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D +GNYV+Q + + ++V L+ + L + K+GSNV
Sbjct: 689 TLDPFGNYVVQYIITKESESGNNYFTLKIVQALKSKVTELSLHKFGSNV 737
>gi|448112001|ref|XP_004201984.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359464973|emb|CCE88678.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 825
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 150/306 (49%), Gaps = 45/306 (14%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGD----------------------SRILDKLFWVVSGFT 50
++ SL +DQ G ++LQ L G S I ++++ +
Sbjct: 497 EILSLCKDQHGCRFLQRQLDLGRELSENPTGELSKANILPNDVAASMIFNEIYLKI---- 552
Query: 51 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
ELM+ +G ++ K E+ + Q +++ + + F+ ++D G+ +++KL++ +
Sbjct: 553 VELMTDPFGNYLIQKLFENVSTDQRIILVKNSSPE---FIKIALDTHGTRALQKLVECIT 609
Query: 111 H-------LPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHC 163
+ L H++S + L G+ V+ +CL+ +N FI+ A +C
Sbjct: 610 TEEEGRIIIESLSPHIVSLSRDLN--------GNHVVQKCLQKLKPSENQFIFDTASMYC 661
Query: 164 LYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFL 223
+A H GC L +D+ +RKQ+ ++ NA +LS GNYVVQ+VLS D
Sbjct: 662 NEIATHRHGCCVLQRCLDHGNAEQRKQLSLRVAENATNLSLDPFGNYVVQYVLSRGDEHS 721
Query: 224 IDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL-NSDQILQVANDKYGNY 282
I I ++ + + LSL K GS V++K L+ +I+ LL N ++ ++ ND +GNY
Sbjct: 722 IGLIMDHIKNNIITLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELLNDAFGNY 781
Query: 283 VIQTAL 288
V+QT+L
Sbjct: 782 VLQTSL 787
>gi|15238635|ref|NP_200826.1| pumilio 19 [Arabidopsis thaliana]
gi|313471418|sp|Q9LSS8.2|PUM19_ARATH RecName: Full=Putative pumilio homolog 19; Short=APUM-19;
Short=AtPUM19
gi|332009907|gb|AED97290.1| pumilio 19 [Arabidopsis thaliana]
Length = 327
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 8/276 (2%)
Query: 51 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
F LM+ G F + I ++++L + +T F+ KFGS V+KL+
Sbjct: 46 FNLMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD 105
Query: 111 HLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
+ +A+ R F + K S V ++ + +Y+ L H L LAC +
Sbjct: 106 DVDAFF---CAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQ 162
Query: 171 QGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
GCI LN+ I + R Q+L L+ NA LS SGN+VVQHVL+L D I I
Sbjct: 163 HGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAV 222
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTA 287
L G ++LS K GS++V+K L+ + ++ ++ ELL + D+++++A +++GN+V+ A
Sbjct: 223 NLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKA 282
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L T ++ R+ + LV KL + LR +G+N+
Sbjct: 283 LRFT-KEMRMDLFWGLVQKLMPFIHLLR-RSHGNNI 316
>gi|8885569|dbj|BAA97499.1| unnamed protein product [Arabidopsis thaliana]
Length = 315
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 8/276 (2%)
Query: 51 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
F LM+ G F + I ++++L + +T F+ KFGS V+KL+
Sbjct: 34 FNLMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD 93
Query: 111 HLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
+ +A+ R F + K S V ++ + +Y+ L H L LAC +
Sbjct: 94 DVDAFF---CAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQ 150
Query: 171 QGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
GCI LN+ I + R Q+L L+ NA LS SGN+VVQHVL+L D I I
Sbjct: 151 HGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAV 210
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTA 287
L G ++LS K GS++V+K L+ + ++ ++ ELL + D+++++A +++GN+V+ A
Sbjct: 211 NLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKA 270
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L T ++ R+ + LV KL + LR +G+N+
Sbjct: 271 LRFT-KEMRMDLFWGLVQKLMPFIHLLR-RSHGNNI 304
>gi|384494806|gb|EIE85297.1| hypothetical protein RO3G_10007 [Rhizopus delemar RA 99-880]
Length = 416
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 144/309 (46%), Gaps = 42/309 (13%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ L +DQ G +YLQ+ L + + +F V Y FV
Sbjct: 102 EIYLLCKDQNGCRYLQKKLEETNLEQREIIFNQV-----------YPHFV---------- 140
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+L S++ G+ +V+++I++++ L + ++ A + L+
Sbjct: 141 --------------ELMTEISLNMHGTRAVQRMIELIS-LDEQIQAIVKAFSPIVVTLIK 185
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL FIY A E+C+ +A H GC L ID + KQ++
Sbjct: 186 DINGNHVIQKCLHRFTTKHKQFIYDAVSENCIEVATHRHGCCVLQRCIDYSANHQTKQLV 245
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I +A +L + GNYVVQ+VL L D D + G+ LS+ K S V++KC+
Sbjct: 246 DEIISHALTLVQDPYGNYVVQYVLELGDAKFSDRLIRQFIGNLSKLSIQKYSSNVMEKCI 305
Query: 253 KY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ ++ H +I+E++N D++ ++ D Y NYV+QTAL S HQ+L ++
Sbjct: 306 RVAEEDTRHDLIQEMMNKDRLEKLLKDSYANYVVQTALDYASE----SQHQQLAECIRPL 361
Query: 311 LAALRVMKY 319
L +R Y
Sbjct: 362 LPTIRNTSY 370
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 30/162 (18%)
Query: 182 NMKGSRRKQ-ILHLISVN-------------AASLSRHRSGNYVVQHVL----SLEDPFL 223
NM G+R Q ++ LIS++ +L + +GN+V+Q L + F+
Sbjct: 149 NMHGTRAVQRMIELISLDEQIQAIVKAFSPIVVTLIKDINGNHVIQKCLHRFTTKHKQFI 208
Query: 224 IDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGN 281
DA+ + ++++ + G V+Q+C+ Y + +++E+++ L + D YGN
Sbjct: 209 YDAVS----ENCIEVATHRHGCCVLQRCIDYSANHQTKQLVDEIIS--HALTLVQDPYGN 262
Query: 282 YVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
YV+Q L + + S RL+ + +L+ L + KY SNV
Sbjct: 263 YVVQYVLE--LGDAKFS--DRLIRQFIGNLSKLSIQKYSSNV 300
>gi|71028510|ref|XP_763898.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350852|gb|EAN31615.1| RNA-binding protein, putative [Theileria parva]
Length = 915
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 146/316 (46%), Gaps = 21/316 (6%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
++AQDQ G + LQ L D+ + V F LM+ +G ++ K + C+ QL
Sbjct: 295 AIAQDQTGCRMLQRQLECSDTAFTSAVLREVLDNLFLLMTDPFGNYLCQKLMSVCDAGQL 354
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
II Q F+ ++ G+ +++KLI+VV+ + + + L L+
Sbjct: 355 GDIITGCETQ---FIPICLNMHGTRAIQKLIEVVSGNN--VNRITAILSAGVVELINDLN 409
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +CL + +FIY+A EHC+ LA H GC + ID ++R +++ I
Sbjct: 410 GNHVIQKCLVALSSDDCEFIYRAMNEHCVGLATHRHGCCVMQRCIDAASPTQRAKLVDTI 469
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY- 254
+ L GNYV+Q+VL L D + I L S K S VV++CL +
Sbjct: 470 AAKTLELVEDAYGNYVIQYVLRLRDDAVNARIVSLLCEDLTKFSKHKFSSNVVERCLIFC 529
Query: 255 -QNAVHYIIEELLN------SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+ ++ LN D IL D +GNYVIQ L + D L+ L+ +
Sbjct: 530 PSSVRSNLVSRFLNLPFSVLHDLIL----DPFGNYVIQRVL-NVAQPDELA---HLLDII 581
Query: 308 QQHLAALRVMKYGSNV 323
Q HL L+++ G +
Sbjct: 582 QPHLEELKLVSSGKRI 597
>gi|357489397|ref|XP_003614986.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516321|gb|AES97944.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 349
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 12/276 (4%)
Query: 39 LDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFG 98
+D +F V G + + + +E + Q I+ K+T + AS+D +G
Sbjct: 18 IDTMFNEVIGDVVKQTLDPFMSNIVQHVLEFGRDDQRLKIVRKLTQHPDQLVEASLDSYG 77
Query: 99 SSSVKKLIKV---VAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFI 155
+ V+KLI + + Y ++S F +L+M G+ V+ +CL N+FI
Sbjct: 78 TKCVQKLISTHNSKKEIALVSYSLLSG----FLYLVMDLDGNQVLQRCLSCWSVEDNEFI 133
Query: 156 YQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHV 215
Y AA C +A E GC L I+ G+ +++++ I A L++H GN++VQ++
Sbjct: 134 YDAATRFCYAVATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGNHIVQYI 193
Query: 216 LSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-QNAVHYIIEELLNSDQILQV 274
+ +++P I + G YV LS+ K VV+KCL++ I++E L +
Sbjct: 194 IQMQNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHIVETRARIVQEFLAVPYFENL 253
Query: 275 ANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
D Y NYV+Q AL T S+H+ LV ++ H
Sbjct: 254 LQDPYANYVVQCALKFT----EGSLHESLVETVRSH 285
>gi|449710016|gb|EMD49164.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 476
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 148/316 (46%), Gaps = 22/316 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D + DQ G +YLQ L + + +F + LMS +G ++ K IE N
Sbjct: 154 DFSKMCHDQYGCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKLIEVVNS 213
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP--LLYHVMSALKRLFKFL 130
Q II KIT F + S + G+ S++KLI + +L +V+S L
Sbjct: 214 EQRIQIITKIT---PTFFIISKNIHGTRSIQKLISCYSTKEEQNMLINVISPY---VIEL 267
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALE--HCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ VI +CL+ N FI+ A + + + +A H+ GC + ID R
Sbjct: 268 IFDSNGNHVIQECLKTFGKSDNGFIFDAIVSDGNLVKVATHKHGCCVVQRCID---YGNR 324
Query: 189 KQILHLISV---NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+Q++ LI N+ L + GNYVVQ++L+++ +I+ + L +DLS+ K S
Sbjct: 325 QQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSS 384
Query: 246 FVVQKCLKYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
V++K ++ A I + L + ++ D Y NYVIQT L Q + H +L
Sbjct: 385 NVIEKLVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLD----QSSVEYHSKL 440
Query: 304 VTKLQQHLAALRVMKY 319
+ HL+A+R Y
Sbjct: 441 SNWIIPHLSAIRNTPY 456
>gi|67481757|ref|XP_656228.1| pumilio domain-containing protein C6G9.14 [Entamoeba histolytica
HM-1:IMSS]
gi|56473414|gb|EAL50842.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 476
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 148/316 (46%), Gaps = 22/316 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D + DQ G +YLQ L + + +F + LMS +G ++ K IE N
Sbjct: 154 DFSKMCHDQYGCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKLIEVVNS 213
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP--LLYHVMSALKRLFKFL 130
Q II KIT F + S + G+ S++KLI + +L +V+S L
Sbjct: 214 EQRIQIITKIT---PTFFIISKNIHGTRSIQKLISCYSTKEEQNMLINVISPY---VIEL 267
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALE--HCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ VI +CL+ N FI+ A + + + +A H+ GC + ID R
Sbjct: 268 IFDSNGNHVIQECLKTFGKSDNRFIFDAIVSDGNLVKVATHKHGCCVVQRCID---YGNR 324
Query: 189 KQILHLISV---NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+Q++ LI N+ L + GNYVVQ++L+++ +I+ + L +DLS+ K S
Sbjct: 325 QQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSS 384
Query: 246 FVVQKCLKYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
V++K ++ A I + L + ++ D Y NYVIQT L Q + H +L
Sbjct: 385 NVIEKLVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLD----QSSVEYHSKL 440
Query: 304 VTKLQQHLAALRVMKY 319
+ HL+A+R Y
Sbjct: 441 SNWIIPHLSAIRNTPY 456
>gi|242036643|ref|XP_002465716.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
gi|241919570|gb|EER92714.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
Length = 716
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 146/309 (47%), Gaps = 37/309 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G +YLQ+ G + D +F + +LM +G ++ K +E C+E
Sbjct: 425 IYHMAKDQNGCRYLQDKFLEGKHHV-DAIFEGIINHIADLMISSFGNYLVQKMLEVCDEG 483
Query: 74 QLALIILKITFQDQL--FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q IIL +T QD + + S++ G+ V++LI+ V ++ ++SAL+ F L+
Sbjct: 484 QRLRIILVLT-QDPVKQLIAISLNTHGTRVVQRLIETVRSRDQIIL-IISALQPNFMLLV 541
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +CL +F G + I N +G + +
Sbjct: 542 NDPNGNHVIQKCL-------TNF-----------------GAEDNKRCISNARGVYQANL 577
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ I L++ GNYVVQ+VL L+ P + G Y+ LS K S VV++C
Sbjct: 578 IVEICARGFELAQDPFGNYVVQYVLELKIPSANAHLASQFEGKYIYLSKQKVSSNVVERC 637
Query: 252 LKY--QNAVHYIIEE--LLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
LK+ +A I+ E LL+ Q+ D Y NYVI TAL T + +H LV +
Sbjct: 638 LKFFPDDAKAVIVHELLLLSGSHFEQLLQDPYANYVIYTALLHT----KGHLHNALVEAI 693
Query: 308 QQHLAALRV 316
+ H A+R
Sbjct: 694 RPHEDAIRT 702
>gi|62002537|gb|AAX58753.1| PUF-domain RNA-binding protein [Physcomitrella patens]
Length = 1118
Score = 102 bits (253), Expect = 4e-19, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 34/320 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E + Q
Sbjct: 792 DQHGSRFIQQKLETATPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQQ----- 846
Query: 80 LKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFL 130
+ +QL L+ S+ +G ++K ++VV + L HVM ++
Sbjct: 847 -RRELANQLVGHVLVLSLQMYGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVR------ 899
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRK 189
+ G+ VI +C+E K +FI A + L+ H GC + +++ ++K
Sbjct: 900 --DQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQK 957
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I + +L++ + GNYVVQHVL + I L G V +S K S VV+
Sbjct: 958 GIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVE 1017
Query: 250 KCLKYQNAV--HYIIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL+Y V +I+E+L + ++ LQ + D++ NYV+Q L ET + S + L
Sbjct: 1018 KCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQKVL-ETCDE---SQRELL 1073
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ +++ HL AL+ YG ++
Sbjct: 1074 LGRIRVHLHALKKYTYGKHI 1093
>gi|168012861|ref|XP_001759120.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689819|gb|EDQ76189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1119
Score = 102 bits (253), Expect = 4e-19, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 34/320 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E + Q
Sbjct: 793 DQHGSRFIQQKLETATPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQQ----- 847
Query: 80 LKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFL 130
+ +QL L+ S+ +G ++K ++VV + L HVM ++
Sbjct: 848 -RRELANQLVGHVLVLSLQMYGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVR------ 900
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRK 189
+ G+ VI +C+E K +FI A + L+ H GC + +++ ++K
Sbjct: 901 --DQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQK 958
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I + +L++ + GNYVVQHVL + I L G V +S K S VV+
Sbjct: 959 GIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVE 1018
Query: 250 KCLKYQNAV--HYIIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL+Y V +I+E+L + ++ LQ + D++ NYV+Q L ET + S + L
Sbjct: 1019 KCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQKVL-ETCDE---SQRELL 1074
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ +++ HL AL+ YG ++
Sbjct: 1075 LGRIRVHLHALKKYTYGKHI 1094
>gi|297806995|ref|XP_002871381.1| hypothetical protein ARALYDRAFT_908911 [Arabidopsis lyrata subsp.
lyrata]
gi|297317218|gb|EFH47640.1| hypothetical protein ARALYDRAFT_908911 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 59 GRFV-FGKFIESCN-------ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
GRF F KF++ + ES L I +T + FL + +++GS S+ L +
Sbjct: 107 GRFAEFQKFLQDLDTNPTAERESHLFKIGSLLTTNKRTFLHLATNQYGSQSLHILFRRSP 166
Query: 111 HLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
L LL+H A+ F LM K +I+ + K + +Y+ E+ L LA
Sbjct: 167 SLDHLLFH---AVGINFFLLMTDKYARGLIISAIRAVDKTKKEVLYKLTYEYTLQLA--- 220
Query: 171 QGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFA 230
+G R I ++ NA L+ G +VVQ+ L+L++P AI
Sbjct: 221 -------------RGKYRDLIFECVAKNAEWLAFDPYGTHVVQNFLTLQNPVATTAIAER 267
Query: 231 LRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSD-QILQVANDKYGNYVIQTALA 289
LRG++ L++ + GS+VV+KCLK A ++EE +D + +++ DK+GN+V+Q AL
Sbjct: 268 LRGNFFSLAMERQGSYVVEKCLKSDFARGKVLEEFRGNDKEWVRMTTDKFGNFVVQCALR 327
Query: 290 ETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
++ + + V KL+ H + + +G N +
Sbjct: 328 VMKEKEMRPMLREFVEKLRPHFWRMEI-GHGRNTLR 362
>gi|156084740|ref|XP_001609853.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
gi|154797105|gb|EDO06285.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
Length = 656
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 150/319 (47%), Gaps = 12/319 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+DQ G + LQ+ L + D +++ + V +LM +G ++ K I C+ Q+
Sbjct: 239 IAKDQTGCRLLQKMLETEDYLVVETILEGVMDNLVDLMMDPFGNYLCQKLITVCSTQQID 298
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
II + + S++ G+ ++++LI+V+ H P + V L + L+ G
Sbjct: 299 AII---DVAGPMLIDISLNMHGTRTLQRLIEVL-HEPKQIAKVTKLLSPSVETLVTDING 354
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI +CL +FI+QA L+ L A H GC + ID +R +++ +
Sbjct: 355 NHVIQKCLSVLPPEDCEFIHQAILKKSLMFATHRHGCCVIQRCIDAANTRQRDELVETLI 414
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC--LKY 254
+ L + GNYVVQ++L L++ + I A+ + K S V++KC L +
Sbjct: 415 EHTLELIQDPFGNYVVQYILKLKNMDVNARIVKAVAPKATLYAKHKFSSNVIEKCLILTH 474
Query: 255 QNAVHYIIEELLNS--DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ ++E+ + + D + + +GNYVIQ L+ R D L+ +++ H+
Sbjct: 475 TRIRNILVEKFVKAPYDTLKDLMLHPFGNYVIQRVLSVAQRSDL----DELLKRMRPHID 530
Query: 313 ALRVMKYGSNVYKWTTASH 331
LR M G + T H
Sbjct: 531 ELRTMSTGKRIAAKITKKH 549
>gi|68073265|ref|XP_678547.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56499050|emb|CAH95801.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 851
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 165/326 (50%), Gaps = 13/326 (3%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ +A+DQ + LQ+ L + +D+++ ELM +G ++ K IE C
Sbjct: 462 NVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLCQKLIEVCTP 521
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q+ II K + D+L + AS+ G+ +V+KLI+++ P + + ++LK L+
Sbjct: 522 EQIEKIIDKSS--DEL-INASISVHGTRTVQKLIEMIK-TPSQIRKITNSLKNSIIILIK 577
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ V+ +CL + + +FIY L++ + ++ H GC + ID+ ++++ ++
Sbjct: 578 DINGNHVVQKCLGTLSSIQCNFIYDEILKNFVEVSTHRHGCCVIQRCIDSANEAQKELLI 637
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ IS N+ L + GNYVVQ++L++ + + I L ++ K S V++KCL
Sbjct: 638 NKISSNSLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHAVQKFSSNVIEKCL 697
Query: 253 --KYQNAVHYIIEELLNSDQ--ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
+I LL + + V DKYGNYVIQ AL+ + L+ +LV ++
Sbjct: 698 IIGTTKCRKIMINGLLKKGKNVLKNVILDKYGNYVIQRALS-VAPEPELT---KLVEGIK 753
Query: 309 QHLAALRVMKYGSNVYKWTTASHPCL 334
++ LR + G +K HP L
Sbjct: 754 PYIKELRNINSGRIAWKL-AKKHPVL 778
>gi|156844826|ref|XP_001645474.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156116137|gb|EDO17616.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 739
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 154/307 (50%), Gaps = 30/307 (9%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN- 71
+++SL +DQ G ++LQ+ L + +F T ELM+ +G ++ K +E
Sbjct: 419 EIYSLCKDQHGCRFLQKQLDVMGENAANAIFNETKEHTVELMTDSFGNYLIQKLLERVTV 478
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRL 126
E +L + + + F+ +++ G+ +++KL++ V A L V+ +L+
Sbjct: 479 EQRLEIAQISAPY----FVDIALNPHGTRALQKLVECVGTEEEAQL------VVDSLQPS 528
Query: 127 FKFLMMTKPGSSVILQCL---EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
L G+ V+ +CL +P+Y FI+ AA + C+ +A GC L +D+
Sbjct: 529 IVELSKDLNGNHVVQKCLQKLDPTYFQ---FIFDAASQDCVDIATQRHGCCVLQRCLDHG 585
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE-DPFLID---AICFALRGHYVDLS 239
+R+ + ++ N LS GNYVVQ+V++ E + D I L+ DLS
Sbjct: 586 NKDQRRGLCEMLLSNIDQLSIDPFGNYVVQYVITKESEEKAFDYSYKIVEVLKPKVKDLS 645
Query: 240 LTKCGSFVVQKCLKYQNAVHYIIEELL-NSD--QILQVANDKYGNYVIQTALAETMRQDR 296
L K GS VV+K LK +I ELL N+D +I + ND YGNYV+QTAL +
Sbjct: 646 LHKFGSNVVEKILKTPALSEPLILELLKNNDESEIQMLLNDSYGNYVLQTAL-DVSHSTN 704
Query: 297 LSVHQRL 303
S+++RL
Sbjct: 705 PSLYKRL 711
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 202 LSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY- 260
LS+ +GN+VVQ L DP I A VD++ + G V+Q+CL + N
Sbjct: 532 LSKDLNGNHVVQKCLQKLDPTYFQFIFDAASQDCVDIATQRHGCCVLQRCLDHGNKDQRR 591
Query: 261 -IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKY 319
+ E LL++ I Q++ D +GNYV+Q + + + ++V L+ + L + K+
Sbjct: 592 GLCEMLLSN--IDQLSIDPFGNYVVQYVITKESEEKAFDYSYKIVEVLKPKVKDLSLHKF 649
Query: 320 GSNV 323
GSNV
Sbjct: 650 GSNV 653
>gi|164658049|ref|XP_001730150.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
gi|159104045|gb|EDP42936.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
Length = 447
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 7/228 (3%)
Query: 98 GSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQ 157
G+ +V+K I ++ P ++ A R L+ G+ VI +CL N FIY
Sbjct: 3 GTRAVQKTIDFIS-TPAQTQAIIDAFARNVVTLIKDLNGNHVIQKCLNRLPAGDNQFIYD 61
Query: 158 AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLS 217
A C+ +A H GC L ID+ S+R+Q+++ I++ + +L + GNYVVQ+VL
Sbjct: 62 AVAAQCVDVATHRHGCCVLQRCIDHASESQRQQLVNEITMYSLTLVQDPFGNYVVQYVLD 121
Query: 218 LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAV--HYIIEELLNSDQILQVA 275
L DP +++ GH LS K S V++KC++ H ++ EL++ ++ +
Sbjct: 122 LNDPVSTESVTNQFLGHVFQLSTQKFSSNVIEKCIRVAEPPLRHKLVAELVDPSRLELLL 181
Query: 276 NDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D + NYV+QT L R LV ++ L ++R YG +
Sbjct: 182 RDSFANYVVQTCLDYAEPAQRT----HLVECIRPILPSIRNTPYGKRI 225
>gi|50284731|ref|XP_444793.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524095|emb|CAG57684.1| unnamed protein product [Candida glabrata]
Length = 786
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 21/303 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G ++LQ+ L + D +F +T ELM+ +G ++ K +E +
Sbjct: 467 NIYSLCKDQHGCRFLQKQLDVLGKKASDAIFEETKEYTVELMTDSFGNYLIQKLLERVTD 526
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLF 127
Q + + KI + + S D G+ +++KLI+ + A + V+ +L+
Sbjct: 527 DQR-VELAKIAAPKMVEI--SKDPHGTRALQKLIECISTKEEAEI------VVKSLQPDT 577
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
L G+ VI +CL+ + FI+ AA C +A H GC L +D+ ++
Sbjct: 578 VILSKDLNGNHVIQKCLQKLNPEDSQFIFDAAGNECGEIATHRHGCCVLQRCLDHGTKTQ 637
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLE----DPFLIDAICFALRGHYVDLSLTKC 243
K + + L+ GNYVVQ+++S E D I L+ + +LS+ K
Sbjct: 638 FKDLCEKLLKYIDMLTFDPFGNYVVQYIISKETERNDYDYTYKIVNQLKPRFTELSVHKF 697
Query: 244 GSFVVQKCLKYQNAVHYIIEELLN--SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
GS VV+K L+ II EL+N S ++ + ND +GNYV+QTAL + R +++
Sbjct: 698 GSNVVEKVLRTPVVSETIINELINEGSAEVQALLNDSFGNYVLQTAL-DISRDTNPYMYK 756
Query: 302 RLV 304
+LV
Sbjct: 757 KLV 759
>gi|357443885|ref|XP_003592220.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355481268|gb|AES62471.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 416
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 13/314 (4%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES---C 70
+ S+A D G QYLQ + G+ ++ + +V +LM+ ++ K ++
Sbjct: 94 VLSMAMDWRGCQYLQAKIEKGNPADVEFILSIVKDHVHQLMT-HNNNYLIKKIFQARSGV 152
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q+ I+L I DQ +D G+ ++ ++K + V+ + R+ L
Sbjct: 153 TPEQMESIVLSIISDDQKLKHVCMDNRGTRVMQNMLKNIKLSFTTYNVVVCTMHRITLAL 212
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G VILQCL+ + I +C+ + + GC + + ++GS +
Sbjct: 213 VKSFNGGYVILQCLKFFQSEHKRVILDQVARNCVDITTDKIGCSIIQKCLSLVEGSVKSL 272
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I NA L+ GNYV+Q V+++E + + LRG + S++K S VV+
Sbjct: 273 LVTEIISNAMILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSMSKHSSNVVED 332
Query: 251 CLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVH-QRLVTK- 306
L++ +N V I+EE++ S L V D +GNYV Q AL T + RL +L+T
Sbjct: 333 LLRFSNENDVAVIVEEIMKSCDFLNVVQDPFGNYVAQRALKCT--KGRLHRELAKLITSN 390
Query: 307 ---LQQHLAALRVM 317
LQ HL RV+
Sbjct: 391 KRILQSHLYGKRVL 404
>gi|366987657|ref|XP_003673595.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
gi|342299458|emb|CCC67213.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
Length = 828
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 161/322 (50%), Gaps = 26/322 (8%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G ++LQ+ L S+ D +F T ELM+ +G ++ K IE
Sbjct: 509 NIYSLCKDQHGCRFLQKQLDVLGSKAADLIFEETKFHTIELMTDSFGNYLMQKLIERVTT 568
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLF 127
Q + + KI F+ +++ G+ +++KLI+ + A + ++ + ++ +L
Sbjct: 569 EQ-RIELAKIA--SPQFVEIALNPHGTRALQKLIECINTEEEAKI--IVESLRDSIVQLS 623
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
K L G+ V+ +CL+ + FI+ A ++C+ +A H GC L +D+ +
Sbjct: 624 KDLN----GNHVVQKCLQKLHPTDFQFIFDATCDNCVDIATHRHGCCVLQRCLDHGTKEQ 679
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLE---DPF-LIDAICFALRGHYVDLSLTKC 243
+++ + + L+ GNYVVQ+V++ E D F I L+ +LS+ K
Sbjct: 680 CEKLCDKLLSHVDKLTLDPFGNYVVQYVITKETERDEFDYTHKIVHLLKPKVAELSVHKF 739
Query: 244 GSFVVQKCLKYQNAVHYIIEELLNSD-QILQVANDKYGNYVIQTALAETMRQ-----DRL 297
GS V++K L+ +I ELLN + +I + ND YGNYV+QTAL + DRL
Sbjct: 740 GSNVIEKILRTPVVTETMILELLNHESEIQNLLNDSYGNYVLQTALDISHEHNKYLYDRL 799
Query: 298 S--VHQRLVTKLQQHLAALRVM 317
S V LV ++ R+M
Sbjct: 800 SAIVTPLLVGPIRNTPHGKRIM 821
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Query: 202 LSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--Q 255
LS+ +GN+VVQ L P F+ DA C + VD++ + G V+Q+CL + +
Sbjct: 622 LSKDLNGNHVVQKCLQKLHPTDFQFIFDATC----DNCVDIATHRHGCCVLQRCLDHGTK 677
Query: 256 NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALR 315
+ ++LL+ + ++ D +GNYV+Q + + +D ++V L+ +A L
Sbjct: 678 EQCEKLCDKLLS--HVDKLTLDPFGNYVVQYVITKETERDEFDYTHKIVHLLKPKVAELS 735
Query: 316 VMKYGSNV 323
V K+GSNV
Sbjct: 736 VHKFGSNV 743
>gi|365760688|gb|EHN02392.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 891
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 151/300 (50%), Gaps = 31/300 (10%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E+
Sbjct: 570 NIHSLCKDQHGCRFLQKQLDVLGSKAADAIFEETKEYTVELMTDSFGNYLIQKLLEAVTT 629
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYH----VMSALKRLFK 128
Q +++ KI+ F+ S++ G+ +++KLI+ + Y V+ +L+
Sbjct: 630 EQ-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECIK-----TYEEAQIVVDSLRPYTV 681
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L G+ VI +CL+ FI+ A ++C+ +A H GC L +D+ G+R
Sbjct: 682 QLSKDLNGNHVIQKCLQRLKPENFQFIFDAICDNCIDIATHRHGCCVLQRCLDH--GTRE 739
Query: 189 K------QILHLISVNAASLSRHRSGNYVVQHVLSLEDPF----LIDAICFALRGHYVDL 238
+ ++L L+ L+ GNYVVQ++++ E I L+ ++L
Sbjct: 740 QCETLCNKLLTLVD----KLTLDPFGNYVVQYIITKESERKKYDYTHKIVHLLKPRAIEL 795
Query: 239 SLTKCGSFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
S+ K GS V++K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 796 SIHKFGSNVIEKILKTPIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 855
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 610 LMTDSFGNYLIQKLLEAVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTYEEA 669
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAIC + +D++ + G
Sbjct: 670 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAIC----DNCIDIATHRHG 725
Query: 245 SFVVQKCLKYQNAVHYIIEELLNSDQILQVAN----DKYGNYVIQTALAETMRQDRLSVH 300
V+Q+CL + E L N ++L + + D +GNYV+Q + + + +
Sbjct: 726 CCVLQRCLDH--GTREQCETLCN--KLLTLVDKLTLDPFGNYVVQYIITKESERKKYDYT 781
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 782 HKIVHLLKPRAIELSIHKFGSNV 804
>gi|357167245|ref|XP_003581070.1| PREDICTED: pumilio homolog 2-like [Brachypodium distachyon]
Length = 764
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 155/315 (49%), Gaps = 13/315 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ ++ DQ GS+++Q+ L + +K+F + L + +G +V KF E E
Sbjct: 421 NVMKVSVDQYGSRFIQQKLEEASAADREKIFPEILSNAIPLTTDVFGNYVIQKFFEFATE 480
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
SQL + K+ ++F L S +G V+K+I+VV + ++ LK +
Sbjct: 481 SQLNQLADKLN--GRIFEL-SFHMYGCRVVQKVIEVVDMDRKI--DIVQELKNYVLKCIG 535
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQI 191
+ G+ VI +C+E + F+ +A L L H+ GC + +++ + + +
Sbjct: 536 DQNGNHVIQKCIECVPEERIPFVIEAILSQIFMLCTHQYGCRVIQRVLEHCHDPATQSAV 595
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
++ I +A L+ + GNYVVQHVL P +I L G + LS K S V++KC
Sbjct: 596 MNEIVQHACGLTEDKFGNYVVQHVLQHGKPEERSSIIQKLSGQVLFLSQQKYASNVIEKC 655
Query: 252 LKYQNAVHY--IIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
L Y +I E+++S Q Q + D++GNYV+Q L +T L + +++ ++
Sbjct: 656 LVYGTPEERDGLIREIVSSGQTFQALMKDQFGNYVVQKVL-QTCDDRHLEM---ILSSIK 711
Query: 309 QHLAALRVMKYGSNV 323
HL L+ YG ++
Sbjct: 712 LHLNELKTYTYGKHI 726
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 159 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSL 218
AL + + ++ + G + ++ + R++I I NA L+ GNYV+Q
Sbjct: 418 ALGNVMKVSVDQYGSRFIQQKLEEASAADREKIFPEILSNAIPLTTDVFGNYVIQKFFEF 477
Query: 219 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQILQVAN 276
++ + L G +LS G VVQK ++ + I++EL N +L+
Sbjct: 478 ATESQLNQLADKLNGRIFELSFHMYGCRVVQKVIEVVDMDRKIDIVQELKN--YVLKCIG 535
Query: 277 DKYGNYVIQTALAETMRQDRL 297
D+ GN+VIQ + E + ++R+
Sbjct: 536 DQNGNHVIQKCI-ECVPEERI 555
>gi|401625713|gb|EJS43708.1| puf4p [Saccharomyces arboricola H-6]
Length = 898
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 151/301 (50%), Gaps = 33/301 (10%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 577 NIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTT 636
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLF 127
Q +++ KI+ F+ S++ G+ +++KLI+ + A + V+ +L+
Sbjct: 637 EQ-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECITTDEEAQI------VVDSLRPYT 687
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
L G+ VI +CL+ FI+ A ++C+ +A H GC L +D+ GSR
Sbjct: 688 VQLSKDLNGNHVIQKCLQRLKPENFQFIFDAICDNCIDIATHRHGCCVLQRCLDH--GSR 745
Query: 188 RK------QILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVD 237
+ ++L L+ L+ GNYVVQ++++ E I L+ ++
Sbjct: 746 EQCETLCDKLLTLVD----KLTLDPFGNYVVQYIITKESAKNKYDYTHKIVHLLKPKVIE 801
Query: 238 LSLTKCGSFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQ 294
LS+ K GS V++K LK +I E+LN+ I + ND YGNYV+QTAL + +Q
Sbjct: 802 LSIHKFGSNVIEKILKTPIVSEPMILEILNNGGEAGIQSLLNDSYGNYVLQTALDISHKQ 861
Query: 295 D 295
+
Sbjct: 862 N 862
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +
Sbjct: 617 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECITTDEEA 676
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAIC + +D++ + G
Sbjct: 677 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAIC----DNCIDIATHRHG 732
Query: 245 SFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
V+Q+CL + + + ++LL + ++ D +GNYV+Q + + +++ +
Sbjct: 733 CCVLQRCLDHGSREQCETLCDKLLT--LVDKLTLDPFGNYVVQYIITKESAKNKYDYTHK 790
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
+V L+ + L + K+GSNV
Sbjct: 791 IVHLLKPKVIELSIHKFGSNV 811
>gi|325187460|emb|CCA21998.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 888
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 155/326 (47%), Gaps = 27/326 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVS-GFTFELMSGQYGRFVFGKFIESCNE 72
++S+++DQ G + LQE L D + L ++ + S E+M +G ++F K I +E
Sbjct: 532 VYSMSKDQNGCRLLQEQLEYDDRKTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADE 591
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA------------HLPPLLYHVM 120
Q I+ + + A+++ G+ SV+K++++ A LP L+ H
Sbjct: 592 WQRLAIVRAVCPH---LMAAALNLHGTRSVQKVVEICAISQSEKKDATSIDLPQLIVH-- 646
Query: 121 SALKRLFKFLMMTKPGSSVILQCLEPSYNHK-NDFIYQAALEHCLYLACHEQGCINLNNF 179
ALK L + G+ VI + L+ +N K FI+ A C + H GC L
Sbjct: 647 -ALKDDAVRLCIDSNGNHVIQRALQ-YFNPKFTQFIFDAVSRECTTVGTHRHGCCVLQRC 704
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
+D +++K+++ + +A L + GNYVVQ+VL I GH +LS
Sbjct: 705 LDAANVTQKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGHVFELS 764
Query: 240 LTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRL 297
+ K S VV+KCL+ + +EEL+ ++ ++ D++ NYV+Q AL +
Sbjct: 765 IQKFSSNVVEKCLEKAPERIRRRYVEELIVCAKMQRLLQDQFANYVVQRALCVCAESQCM 824
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ LV + HL+A++ G +
Sbjct: 825 A----LVAAICPHLSAMKNSSNGRRI 846
>gi|399219033|emb|CCF75920.1| unnamed protein product [Babesia microti strain RI]
Length = 546
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 160/330 (48%), Gaps = 17/330 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
N L +A+DQ G + LQ++L + + L V+ +LM+ +G ++ K + C
Sbjct: 202 NASLSDMAKDQSGCRLLQKSLDDIPAALEIILKEVLDNL-VDLMTDPFGNYLCQKLMVVC 260
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+E QL+L+I + + S++ G+ +V+KLI++V Y +++ L+ L
Sbjct: 261 SEKQLSLLINALWNN---LVQISLNMHGTRAVQKLIEIVKTRENTQY-LITILEGGVLDL 316
Query: 131 MMTKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ VI +CL PS + + FIY A +C+ LA H GC + ID+ +R
Sbjct: 317 IKDLNGNHVIQKCLLCLPSTDCQ--FIYDAMENNCVELATHRHGCCVMQRCIDSANLEQR 374
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
++ I N L GNYVVQ+V+ L+D + I L + +L+ K S VV
Sbjct: 375 ASLVENIVDNTLVLVEDAFGNYVVQYVMKLKDETINCKILELLLPNLYELAKQKFSSNVV 434
Query: 249 QKCLKY--QNAVHYIIEELLN--SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
++ L Y I+E LLN + + D YGNYVIQ L+ T ++ S+ +
Sbjct: 435 ERLLIYGPDEVRKSIVETLLNEPPEAFKMLILDPYGNYVIQRMLSFTRGEELNSI----L 490
Query: 305 TKLQQHLAALRVMKYGSNVYKWTTASHPCL 334
++ +L LRV+ G + HP L
Sbjct: 491 NMIKPYLNELRVLSTGKRIAAKIAKKHPNL 520
>gi|167377764|ref|XP_001734530.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903897|gb|EDR29287.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 476
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 22/316 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D + DQ G +YLQ L + + +F + LMS +G ++ K IE N
Sbjct: 154 DFSKMCHDQYGCRYLQRQLEDNNPQTTKYIFEQMLPIITPLMSDPFGNYLCQKLIEVVNS 213
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP--LLYHVMSALKRLFKFL 130
Q II KIT F + S + G+ S++KLI + +L +V+S L
Sbjct: 214 EQRIQIIRKIT---PTFFIISKNIHGTRSIQKLISCYSTKEEQNMLINVISPY---VIEL 267
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAAL--EHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ VI +CL+ N FI+ + ++ + +A H+ GC + ID R
Sbjct: 268 IFDSNGNHVIQECLKTFGKSDNGFIFDTIVNDDNLVKVATHKHGCCVVQRCID---YGNR 324
Query: 189 KQILHLIS---VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+Q++ LI N+ L + GNYVVQ++L+++ +I + L +DLS+ K S
Sbjct: 325 QQLITLIDEIVKNSLILVKDAFGNYVVQYILNVDIVGVIIDVTKMLLNDLIDLSMQKFSS 384
Query: 246 FVVQKCLKYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
V++K ++ I ++ L + ++ D Y NYVIQT L Q + H +L
Sbjct: 385 NVIEKLIRSDEIEVRQMIFDKFLQIKDVTKLLQDSYANYVIQTCLD----QSSVEYHSKL 440
Query: 304 VTKLQQHLAALRVMKY 319
+ HL+ +R Y
Sbjct: 441 SNWITPHLSTIRNTPY 456
>gi|169791859|pdb|3BWT|A Chain A, Crystal Structure Of The Rna Binding Domain Of Puf4 From
Saccharomyces Cerevisiae
Length = 333
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 11/289 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 15 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 74
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +++ KI+ F+ S++ G+ +++KLI+ + V+ +L+ L
Sbjct: 75 Q-RIVLTKISSPH--FVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKD 130
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ FI+ A + C+ +A H GC L +D+ + +
Sbjct: 131 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 190
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPF----LIDAICFALRGHYVDLSLTKCGSFVVQ 249
+ L+ GNYVVQ++++ E I L+ ++LS+ K GS V++
Sbjct: 191 KLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIE 250
Query: 250 KCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 251 KILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 299
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 54 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 113
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 114 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 169
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 170 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 224
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 225 THKIVHLLKPRAIELSIHKFGSNV 248
>gi|119182519|ref|XP_001242388.1| hypothetical protein CIMG_06284 [Coccidioides immitis RS]
Length = 1208
Score = 100 bits (249), Expect = 9e-19, Method: Composition-based stats.
Identities = 76/313 (24%), Positives = 150/313 (47%), Gaps = 34/313 (10%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + +F ELM+ +G ++ K +E N+
Sbjct: 814 ELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSND 873
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V+ AL+ L+
Sbjct: 874 EQRTALINNAAPQ---LVSIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRDKVVDLVQ 929
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +CL + + A + C ID+ G +R Q++
Sbjct: 930 DLNGNHVIQKCL--------NRLSAADAQRC----------------IDHASGDQRAQLI 965
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ +L + GNYVVQ++L L +P + +C G LS K S V++KCL
Sbjct: 966 AQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCL 1025
Query: 253 KYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + + +I+E+L +++ ++ D + NYV+QTA+ + R++ L+ ++
Sbjct: 1026 RTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVA----LIEAVRPI 1081
Query: 311 LAALRVMKYGSNV 323
L ++R +G +
Sbjct: 1082 LPSIRQTPHGRRI 1094
>gi|169791860|pdb|3BX2|A Chain A, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
gi|169791861|pdb|3BX2|B Chain B, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
Length = 335
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 11/289 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 15 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 74
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +++ KI+ F+ S++ G+ +++KLI+ + V+ +L+ L
Sbjct: 75 Q-RIVLTKISSPH--FVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKD 130
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ FI+ A + C+ +A H GC L +D+ + +
Sbjct: 131 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 190
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPF----LIDAICFALRGHYVDLSLTKCGSFVVQ 249
+ L+ GNYVVQ++++ E I L+ ++LS+ K GS V++
Sbjct: 191 KLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIE 250
Query: 250 KCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 251 KILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 299
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 54 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 113
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 114 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 169
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 170 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 224
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 225 THKIVHLLKPRAIELSIHKFGSNV 248
>gi|403215598|emb|CCK70097.1| hypothetical protein KNAG_0D03510 [Kazachstania naganishii CBS
8797]
Length = 829
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 17/293 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-- 71
+++L +DQ G ++LQ+ L D +F T ELM+ +G ++ K IE
Sbjct: 509 IYTLCKDQHGCRFLQKQLDIMGKEAADVIFEETKEHTVELMTDSFGNYLVQKLIERVTIE 568
Query: 72 -ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
++L++I F+ + + G+ +++KLI+ V+ P ++S LK L
Sbjct: 569 QRTELSMIA------SPHFVSIAKNPHGTRALQKLIECVSS-PEEAQIIISTLKDCVVVL 621
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
G+ VI +CLE FI+ A + C +A H GC L +D ++ +
Sbjct: 622 SKDLNGNHVIQKCLERLQPPDFQFIFDATCKECSSIATHRHGCCVLQRCLDFGTKAQFQS 681
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLE----DPFLIDAICFALRGHYVDLSLTKCGSF 246
+ +++ N L+ GNYVVQ++++ E D I +L+ +LS+ K GS
Sbjct: 682 LCNVLLSNIDKLTLDPFGNYVVQYIVTKETERKDYDYTFKIANSLKAKMGELSVHKFGSN 741
Query: 247 VVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQDR 296
V++K L+ +I+ELLN D +I + ND YGNYV+QT L + ++++
Sbjct: 742 VIEKLLRTPVVCEALIQELLNDDSGKEIELLLNDSYGNYVLQTTLDVSHKRNK 794
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 159 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLS 217
A H + +A + G L I+ + QI+ + LS+ +GN+V+Q L
Sbjct: 577 ASPHFVSIAKNPHGTRALQKLIECVSSPEEAQIIISTLKDCVVVLSKDLNGNHVIQKCLE 636
Query: 218 -LEDP---FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNS--DQI 271
L+ P F+ DA C ++ + G V+Q+CL + + + L N I
Sbjct: 637 RLQPPDFQFIFDATCKECS----SIATHRHGCCVLQRCLDFGTKAQF--QSLCNVLLSNI 690
Query: 272 LQVANDKYGNYVIQ-TALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ D +GNYV+Q ET R+D ++ L+ + L V K+GSNV
Sbjct: 691 DKLTLDPFGNYVVQYIVTKETERKD-YDYTFKIANSLKAKMGELSVHKFGSNV 742
>gi|385252070|pdb|4DZS|A Chain A, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
gi|385252071|pdb|4DZS|B Chain B, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
Length = 357
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 11/289 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 37 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 96
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +++ KI+ F+ S++ G+ +++KLI+ + V+ +L+ L
Sbjct: 97 Q-RIVLTKISSPH--FVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKD 152
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ FI+ A + C+ +A H GC L +D+ + +
Sbjct: 153 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 212
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPF----LIDAICFALRGHYVDLSLTKCGSFVVQ 249
+ L+ GNYVVQ++++ E I L+ ++LS+ K GS V++
Sbjct: 213 KLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIE 272
Query: 250 KCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 273 KILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 321
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 76 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 135
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 136 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 191
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 192 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 246
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 247 THKIVHLLKPRAIELSIHKFGSNV 270
>gi|207345268|gb|EDZ72145.1| YGL014Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 349
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 11/289 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 29 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 88
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +++ KI+ F+ S++ G+ +++KLI+ + V+ +L+ L
Sbjct: 89 Q-RIVLTKISSPH--FVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKD 144
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ FI+ A + C+ +A H GC L +D+ + +
Sbjct: 145 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCD 204
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPF----LIDAICFALRGHYVDLSLTKCGSFVVQ 249
+ L+ GNYVVQ++++ E I L+ ++LS+ K GS V++
Sbjct: 205 KLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIE 264
Query: 250 KCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 265 KILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 68 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 127
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 128 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 183
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 184 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 238
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 239 THKIVHLLKPRAIELSIHKFGSNV 262
>gi|348675055|gb|EGZ14873.1| hypothetical protein PHYSODRAFT_545979 [Phytophthora sojae]
Length = 906
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 162/353 (45%), Gaps = 56/353 (15%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVS-GFTFELMSGQYGRFVFGKFIESCNE 72
+F++++DQ G + LQE L D L ++ + S E+M +G ++F K +E NE
Sbjct: 456 VFAMSKDQNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNE 515
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYH-------------- 118
Q +II +++ + A+++ G+ SV+K+++V A P ++
Sbjct: 516 KQRLVIIRRVSSN---LVAAALNLHGTRSVQKVVEVCATSPDVIEEDYDDDDGDEYGYVN 572
Query: 119 --------------------VMSALKRLFKFLMMTKPGSSVI---LQCLEPSYNHKNDFI 155
++ ALK L + G+ VI LQ ++P YN F+
Sbjct: 573 DREERPEGGERRRTTSLPDIIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQ---FV 629
Query: 156 YQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHV 215
+ A + C + H GC L +D +++ +++ + A L + GNYVVQ+V
Sbjct: 630 FDAVCKECTTVGTHRHGCCVLQRCLDAANKAQKAEVIEQVERQAMKLMQDPYGNYVVQYV 689
Query: 216 L---SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQ 270
L + E+ F + GH +LS+ K S V++KCL+ + I E+ + +
Sbjct: 690 LDSCTAEEAF---GVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPK 746
Query: 271 ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++ D++ NYV+Q AL + L LV ++ HLAA++ G +
Sbjct: 747 MNKMLQDQFANYVVQRALCVCAEEQCL----LLVKAIRPHLAAMKNTSGGRRI 795
>gi|365986156|ref|XP_003669910.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
gi|343768679|emb|CCD24667.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
Length = 809
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 144/286 (50%), Gaps = 19/286 (6%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G ++LQ+ L + DK+F T ELM+ +G ++ K IE +
Sbjct: 491 NIYSLCKDQHGCRFLQKQLDILGTEAADKIFEETKYHTIELMTDSFGNYLIQKLIERVST 550
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLF 127
Q + + Q F+ ++D G+ +++KLI+ + A + ++ + ++ +L
Sbjct: 551 EQRTELAKIASPQ---FVEIALDPHGTRALQKLIECIDTDDEAKI--IVASLSGSIVQLS 605
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
K L G+ V+ +CL+ + FI+ A ++ + +A H GC L D+ +
Sbjct: 606 KDLN----GNHVVQKCLQKLHPKDFQFIFDATCQNSVDIATHRHGCCVLQRCFDHGTKEQ 661
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLE---DPF-LIDAICFALRGHYVDLSLTKC 243
+ + + + L+ GNYVVQ++++ E D F I L+ +LS+ K
Sbjct: 662 CETLCDELLKHVDKLTLDPFGNYVVQYIITKETEKDKFDYTHKIVHLLKPKIAELSVHKF 721
Query: 244 GSFVVQKCLKYQNAVHYIIEELLN-SDQILQVANDKYGNYVIQTAL 288
GS V++K L+ A +I ELLN I + ND YGNYV+QTAL
Sbjct: 722 GSNVIEKLLRTPVATENMILELLNHKADIPNLLNDSYGNYVLQTAL 767
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 27/242 (11%)
Query: 89 FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSY 148
FL +D G+ + K+ + YH + + F G+ +I + +E
Sbjct: 504 FLQKQLDILGTEAADKIFEETK------YHTIELMTDSF--------GNYLIQKLIERVS 549
Query: 149 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK-GSRRKQILHLISVNAASLSRHRS 207
+ + + A + +A G L I+ + K I+ +S + LS+ +
Sbjct: 550 TEQRTELAKIASPQFVEIALDPHGTRALQKLIECIDTDDEAKIIVASLSGSIVQLSKDLN 609
Query: 208 GNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYI 261
GN+VVQ L P F+ DA C + VD++ + G V+Q+C + + +
Sbjct: 610 GNHVVQKCLQKLHPKDFQFIFDATC----QNSVDIATHRHGCCVLQRCFDHGTKEQCETL 665
Query: 262 IEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 321
+ELL + ++ D +GNYV+Q + + +D+ ++V L+ +A L V K+GS
Sbjct: 666 CDELLK--HVDKLTLDPFGNYVVQYIITKETEKDKFDYTHKIVHLLKPKIAELSVHKFGS 723
Query: 322 NV 323
NV
Sbjct: 724 NV 725
>gi|8778970|gb|AAF79885.1|AC021198_5 Contains similarity to a putative RNA-binding protein AAF18550
gi|6587864 from Arabidopsis thaliana BAC T11I11
gb|AC012680. It contains Pumilio-family RNA binding
domains PF|00806 [Arabidopsis thaliana]
Length = 559
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 158/343 (46%), Gaps = 51/343 (14%)
Query: 17 LAQDQEGSQYLQENLSSG---DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+A+DQ G + LQ+ + G DS+++ F + EL G ++ K + +E
Sbjct: 221 MARDQIGCRALQKLVEEGTVLDSKVI---FLEIIDHVVELSMDPLGNYIVQKLLVVSDEE 277
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +I+ +T + + + ++ G+ ++K+IK V + V SAL+ F L+
Sbjct: 278 QRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIAL-VKSALEPGFLVLVND 336
Query: 134 KPGSSVILQCLE---PSYNHKN----------------------------DFIYQAALEH 162
G V+ CLE P+ N F+ +AA E+
Sbjct: 337 SNGYHVLQSCLEFLVPNDNKLRLTKLSHILISFLLFLTYVSSDECCEIWCQFVVEAATEY 396
Query: 163 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF 222
C LA H+ GC L + N G + ++++ IS ++ LS+ GNYVVQ ++ +
Sbjct: 397 CAQLATHQYGCYVLQCSLINTVGLQHERLVAEISRDSLRLSQDPFGNYVVQCLIDQQVSS 456
Query: 223 LIDAICFALRGHYVDLSLTKCGSFVVQKCL-KYQNAVHYIIEELLNSDQILQVANDKYGN 281
+ + R H ++L+ K S V++KCL KY + I+ ELL+ Q+ D Y N
Sbjct: 457 V--NLLLPFRTHCIELATQKFSSHVIEKCLRKYPESRAEIVRELLSYPNFEQLLQDPYAN 514
Query: 282 YVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVY 324
YVIQTAL+ T + +V RLV K++ R K SN Y
Sbjct: 515 YVIQTALSVT----KGAVRARLVEKVK------RFGKLQSNPY 547
>gi|222628370|gb|EEE60502.1| hypothetical protein OsJ_13800 [Oryza sativa Japonica Group]
Length = 750
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 19/314 (6%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
L+ DQ GS+++Q+ L + +K+F + L + +G +V KF E ESQL+
Sbjct: 411 LSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLS 470
Query: 77 LIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
DQL FL S +G V+K+I VV + ++ LK +
Sbjct: 471 ------QLADQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKI--SIVGELKNSVLRCISD 522
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQIL 192
+ G+ VI +C+E F+ + L+ L H+ GC + +++ + + ++
Sbjct: 523 QNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVM 582
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I A L+ + GNYVVQHVL P +I L G V+LS K S VV+KCL
Sbjct: 583 DEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCL 642
Query: 253 KY--QNAVHYIIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ + +I E+++S Q Q + D++GNYV+Q L +T L V +++ ++
Sbjct: 643 SFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL-QTCDDKFLVV---ILSSIKM 698
Query: 310 HLAALRVMKYGSNV 323
HL L+ +G ++
Sbjct: 699 HLNELKNYTFGKHI 712
>gi|169791866|pdb|3BX3|A Chain A, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
gi|169791867|pdb|3BX3|B Chain B, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
Length = 335
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 11/289 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 15 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 74
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q +++ KI+ F+ S++ G +++KLI+ + V+ +L+ L
Sbjct: 75 Q-RIVLTKISSPH--FVEISLNPHGCRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKD 130
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI +CL+ FI+ A + C+ +A H GC L +D+ + +
Sbjct: 131 LNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCRVLQRCLDHGTTEQCDNLCD 190
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPF----LIDAICFALRGHYVDLSLTKCGSFVVQ 249
+ L+ GNYVVQ++++ E I L+ ++LS+ K GS V++
Sbjct: 191 KLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIE 250
Query: 250 KCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 251 KILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 299
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + GC L I+ +K
Sbjct: 54 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGCRALQKLIECIKTDEEA 113
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 114 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 169
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 170 CRVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 224
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 225 THKIVHLLKPRAIELSIHKFGSNV 248
>gi|223947513|gb|ACN27840.1| unknown [Zea mays]
gi|413950240|gb|AFW82889.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 873
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 154/323 (47%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 542 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTA 601
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLF 127
Q+ + ++ + L S+ +G ++K I+VV + L HVM ++
Sbjct: 602 QIKELAGQLIGR---VLALSLQMYGCRVIQKAIEVVDLELQTKMVAELEGHVMRCVR--- 655
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI +C+E H +FI + L+ H GC + +++ +
Sbjct: 656 -----DQNGNHVIQKCIECIPQHAIEFIISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPK 710
Query: 188 RKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K S
Sbjct: 711 TQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASN 770
Query: 247 VVQKCLKYQNAV--HYIIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRLSVH 300
V++KCL + N V +I E+L S + L+V D++GNYV+Q L Q R
Sbjct: 771 VIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVLETCDDQQR---- 826
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 827 EMILTRIKTHLNTLKKYTYGKHI 849
>gi|226505762|ref|NP_001146200.1| uncharacterized protein LOC100279770 [Zea mays]
gi|219886161|gb|ACL53455.1| unknown [Zea mays]
Length = 873
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 152/317 (47%), Gaps = 28/317 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +Q+ +
Sbjct: 548 DQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELA 607
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFLMMT 133
++ + L S+ +G ++K I+VV + L HVM ++
Sbjct: 608 GQLIGR---VLALSLQMYGCRVIQKAIEVVDLELQTKMVAELEGHVMRCVR--------D 656
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL- 192
+ G+ VI +C+E H +FI + L+ H GC + +++ + +QI+
Sbjct: 657 QNGNHVIQKCIECIPQHAIEFIISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMM 716
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + L++ + GNYVVQHVL P AI L G V +S K S V++KCL
Sbjct: 717 DEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCL 776
Query: 253 KYQNAV--HYIIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ N V +I E+L S + L+V D++GNYV+Q L Q R + ++T+
Sbjct: 777 VFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVLETCDDQQR----EMILTR 832
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL L+ YG ++
Sbjct: 833 IKTHLNTLKKYTYGKHI 849
>gi|413950241|gb|AFW82890.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 869
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 152/317 (47%), Gaps = 28/317 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +Q+ +
Sbjct: 544 DQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELA 603
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFLMMT 133
++ + L S+ +G ++K I+VV + L HVM ++
Sbjct: 604 GQLIGR---VLALSLQMYGCRVIQKAIEVVDLELQTKMVAELEGHVMRCVR--------D 652
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL- 192
+ G+ VI +C+E H +FI + L+ H GC + +++ + +QI+
Sbjct: 653 QNGNHVIQKCIECIPQHAIEFIISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMM 712
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + L++ + GNYVVQHVL P AI L G V +S K S V++KCL
Sbjct: 713 DEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCL 772
Query: 253 KYQNAV--HYIIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ N V +I E+L S + L+V D++GNYV+Q L Q R + ++T+
Sbjct: 773 VFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVLETCDDQQR----EMILTR 828
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL L+ YG ++
Sbjct: 829 IKTHLNTLKKYTYGKHI 845
>gi|52353575|gb|AAU44141.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa
Japonica Group]
Length = 874
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 374 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 433
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALK 124
Q+ + DQL L S+ +G ++K I+VV + L HVM ++
Sbjct: 434 QIKELA------DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR 487
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E H FI + L+ H GC + +++
Sbjct: 488 --------DQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCD 539
Query: 185 GSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K
Sbjct: 540 DPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKF 599
Query: 244 GSFVVQKCLKYQNAVHY--IIEELL---NSDQILQV-ANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + N V +I E+L N + L+V D++ NYV+Q L Q R
Sbjct: 600 ASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR- 658
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 659 ---EAILTRIKAHLNTLKKYTYGKHI 681
>gi|225463345|ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|296089553|emb|CBI39372.3| unnamed protein product [Vitis vinifera]
Length = 1017
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 146/320 (45%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +F V +LM+ +G +V KF E N
Sbjct: 695 IVEFSADQHGSRFIQQKLENCSVEEKASVFKEVLPHASKLMTDVFGNYVIQKFFEHGNPE 754
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + ++ Q L S+ +G ++K + V+ L ++ L +M
Sbjct: 755 QRKELASQLAGQ---ILPLSLQMYGCRVIQKALDVIE-----LEQKTLLVRELDGHVMRC 806
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E K FI A H L+ H GC + +++ + Q
Sbjct: 807 VRDQNGNHVIQKCIESVPTEKIGFIISAFRSHVATLSTHPYGCRVIQRVLEHCTDELQSQ 866
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I + SL++ + GNYV QHVL P I L+GH V LS K S VV+
Sbjct: 867 FIVDEILESICSLAQDQYGNYVTQHVLERGKPHERSQIINKLKGHIVQLSQHKFASNVVE 926
Query: 250 KCLKYQ--NAVHYIIEELL----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL+Y N +IEE++ +D +L + D++ NYVIQ L R S L
Sbjct: 927 KCLEYGDVNERGLLIEEIIGHNEGNDNLLIMMKDQFANYVIQKILDICTDNQRES----L 982
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++ H AL+ YG ++
Sbjct: 983 FVRIRVHAHALKKYTYGKHI 1002
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++N + + + +A+ L GNYV+Q +P
Sbjct: 694 HIVEFSADQHGSRFIQQKLENCSVEEKASVFKEVLPHASKLMTDVFGNYVIQKFFEHGNP 753
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY----QNAVHYIIEELLNSDQILQVAND 277
+ L G + LSL G V+QK L Q + ++ EL +++ D
Sbjct: 754 EQRKELASQLAGQILPLSLQMYGCRVIQKALDVIELEQKTL--LVREL--DGHVMRCVRD 809
Query: 278 KYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ GN+VIQ + E++ +++ +++ + H+A L YG V
Sbjct: 810 QNGNHVIQKCI-ESVPTEKIGF---IISAFRSHVATLSTHPYGCRV 851
>gi|168030468|ref|XP_001767745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681065|gb|EDQ67496.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1148
Score = 97.4 bits (241), Expect = 8e-18, Method: Composition-based stats.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 20/316 (6%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+ DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q
Sbjct: 809 FSADQHGSRFIQQKLETATLEDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHGTHQQRR 868
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKV--VAHLPPLLYHVMSALKRLFKFLMMTK 134
+ K+ Q L+ S+ +G ++K ++V V L+ + + R + +
Sbjct: 869 ELASKLEGQ---VLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGNVMRCVR----DQ 921
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILH 193
G+ VI +C+E K FI A + L+ H GC + +++ ++K I+
Sbjct: 922 NGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIME 981
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I + +L++ + GNYVVQHVL I L G V +S K S VV+KCL+
Sbjct: 982 EILRSTCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQMSQHKFASNVVEKCLE 1041
Query: 254 YQNAV--HYIIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
Y V +I+E+L + ++ LQ + D++ NYV+Q L ET + S + L+ ++
Sbjct: 1042 YGGPVERQILIDEMLGLTDENEPLQAMMKDQFANYVVQKVL-ETCDE---SQRELLLGRI 1097
Query: 308 QQHLAALRVMKYGSNV 323
+ HL AL+ YG ++
Sbjct: 1098 RVHLHALKKYTYGKHI 1113
>gi|224113073|ref|XP_002316382.1| predicted protein [Populus trichocarpa]
gi|222865422|gb|EEF02553.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 153/317 (48%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +K+F + LM+ +G +V KF++ ES
Sbjct: 675 VVEFSTDQYGSRFIQQKLETASVEEKNKIFPEIIPHARTLMTDVFGNYVIQKFLDHGTES 734
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++ ++T L S+ +G ++K ++++ ++ L +
Sbjct: 735 QRLELVSRLTGN---VLPLSLQMYGCRVIQKALEMID--VDRQTQIVVELDGSVIKCIRD 789
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-L 192
+ G+ VI +C+E + FI A L L+ H GC + +++ K +QI +
Sbjct: 790 QNGNHVIQKCIECVPEDRIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCKDMNTQQIIM 849
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + +L++ + GNYV+QHVL P AI L GH V +S K S VV+KCL
Sbjct: 850 DEIMQSVYTLAQDQYGNYVIQHVLEHGKPQERSAIISKLAGHIVLMSQQKFASNVVEKCL 909
Query: 253 KYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ V+ I+ + ++ + + D +GNYV+Q L ET L + ++++
Sbjct: 910 TFGGPEERQLLVNEILGSTVENEPLQAMMKDPFGNYVVQKVL-ETCNDRSLEL---IISR 965
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL+AL+ YG ++
Sbjct: 966 IRVHLSALKRYTYGKHI 982
>gi|428162887|gb|EKX31992.1| hypothetical protein GUITHDRAFT_39628, partial [Guillardia theta
CCMP2712]
Length = 305
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 24/313 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE----SCNESQL 75
DQ GS+++Q L +++ +F + + LM+ +G +V KF+E ++L
Sbjct: 1 DQHGSRFIQTKLDGANAQDRQLVFEALLPSSVGLMTDLFGNYVVQKFLERDLVKNGRNRL 60
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
I ++ L S+D +G V+K I+V+ P ++ L+ + +
Sbjct: 61 TCSIPQV-------LELSLDMYGCRVVQKAIEVIE--GPRQEQLVRELQGNVMKCVRDQN 111
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +C+E S FI + + + LA H GC + +++ K + IL I
Sbjct: 112 GNHVIQKCIERSAPETVQFIVEDFIGQVVQLAMHPYGCRVIQRILEHCKHDQVAPILSEI 171
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A L + GNYVVQHVL +AI G V +S K S VV+K L Q
Sbjct: 172 VRSAKELVHDQYGNYVVQHVLEHGRGQDREAILQKCEGQIVAMSQHKFASNVVEKLL--Q 229
Query: 256 NAVHYIIEELL-----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ I++E+ + +L + D YGNYV+Q AL DR RL+ +++H
Sbjct: 230 VLLVTILDEVTGNQPSGAPSVLDMMRDAYGNYVVQKALDVCEGVDRA----RLIAAIREH 285
Query: 311 LAALRVMKYGSNV 323
L A+R YG ++
Sbjct: 286 LPAVRKFTYGKHI 298
>gi|242089229|ref|XP_002440447.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
gi|241945732|gb|EES18877.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
Length = 878
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 153/323 (47%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 547 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTA 606
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLF 127
Q+ + ++ + L S+ +G ++K I+VV + L HVM ++
Sbjct: 607 QIKELAGQLIGR---VLALSLQMYGCRVIQKAIEVVDLDLQTKMVAELEGHVMRCVR--- 660
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI +C+E H +FI + L+ H GC + +++ +
Sbjct: 661 -----DQNGNHVIQKCIECIPQHAIEFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPK 715
Query: 188 RKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K S
Sbjct: 716 TQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASN 775
Query: 247 VVQKCLKYQNAV--HYIIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRLSVH 300
V++KCL + N V +I E+L S + L+V D++ NYV+Q L Q R
Sbjct: 776 VIEKCLAFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFANYVVQKVLETCDDQQR---- 831
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 832 EMILTRIKTHLNTLKKYTYGKHI 854
>gi|14719326|gb|AAK73144.1|AC079022_17 putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa]
Length = 851
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 519 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 578
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALK 124
Q+ + DQL L S+ +G ++K I+VV + L HVM ++
Sbjct: 579 QIKELA------DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR 632
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E H FI + L+ H GC + +++
Sbjct: 633 --------DQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCD 684
Query: 185 GSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K
Sbjct: 685 DPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKF 744
Query: 244 GSFVVQKCLKYQNAVHY--IIEELL---NSDQILQV-ANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + N V +I E+L N + L+V D++ NYV+Q L Q R
Sbjct: 745 ASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR- 803
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 804 ---EAILTRIKAHLNTLKKYTYGKHI 826
>gi|215768674|dbj|BAH00903.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 550 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 609
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALK 124
Q+ + DQL L S+ +G ++K I+VV + L HVM ++
Sbjct: 610 QIKELA------DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR 663
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E H FI + L+ H GC + +++
Sbjct: 664 --------DQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCD 715
Query: 185 GSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K
Sbjct: 716 DPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKF 775
Query: 244 GSFVVQKCLKYQNAVHY--IIEELL---NSDQILQV-ANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + N V +I E+L N + L+V D++ NYV+Q L Q R
Sbjct: 776 ASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR- 834
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 835 ---EAILTRIKAHLNTLKKYTYGKHI 857
>gi|57834079|emb|CAE02858.2| OSJNBa0014F04.24 [Oryza sativa Japonica Group]
Length = 623
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 19/311 (6%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +K+F + L + +G +V KF E ESQL+ +
Sbjct: 287 DQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLA 346
Query: 80 LKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
DQL FL S +G V+K+I VV + ++ LK + + G
Sbjct: 347 ------DQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKI--SIVGELKNSVLRCISDQNG 398
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLI 195
+ VI +C+E F+ + L+ L H+ GC + +++ + + ++ I
Sbjct: 399 NHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEI 458
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY- 254
A L+ + GNYVVQHVL P +I L G V+LS K S VV+KCL +
Sbjct: 459 VERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFG 518
Query: 255 -QNAVHYIIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ +I E+++S Q Q + D++GNYV+Q L +T L V +++ ++ HL
Sbjct: 519 TPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL-QTCDDKFLVV---ILSSIKMHLN 574
Query: 313 ALRVMKYGSNV 323
L+ +G ++
Sbjct: 575 ELKNYTFGKHI 585
>gi|222629930|gb|EEE62062.1| hypothetical protein OsJ_16846 [Oryza sativa Japonica Group]
Length = 878
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 546 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 605
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALK 124
Q+ + DQL L S+ +G ++K I+VV + L HVM ++
Sbjct: 606 QIKELA------DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR 659
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E H FI + L+ H GC + +++
Sbjct: 660 --------DQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCD 711
Query: 185 GSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K
Sbjct: 712 DPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKF 771
Query: 244 GSFVVQKCLKYQNAVHY--IIEELL---NSDQILQV-ANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + N V +I E+L N + L+V D++ NYV+Q L Q R
Sbjct: 772 ASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR- 830
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 831 ---EAILTRIKAHLNTLKKYTYGKHI 853
>gi|4261598|gb|AAD13898.1|S58126_1111111 Unknown [Saccharomyces cerevisiae]
gi|234327|gb|AAB19616.1| 98 kda [Saccharomyces cerevisiae]
Length = 888
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 21/294 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D++F +T ELM+ +G ++ K +E
Sbjct: 568 IHSLCKDQHGCRFLQKQLDILGSKAADRIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 627
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFK 128
Q +++ KI+ F+ S++ G+ +++KLI+ + A + V+ +L+
Sbjct: 628 Q-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI------VVDSLRPYTV 678
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L G+ VI +CL+ FI+ A + C+ +A H GC L +D+ +
Sbjct: 679 QLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQC 738
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
+ + L+ GNYVVQ++++ E I L+ ++LS+ K G
Sbjct: 739 DNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFG 798
Query: 245 SFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
S V++K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 799 SNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 852
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 607 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 666
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 667 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 722
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 723 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 777
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 778 THKIVHLLKPRAIELSIHKFGSNV 801
>gi|330801647|ref|XP_003288836.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
gi|325081082|gb|EGC34611.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
Length = 738
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 148/287 (51%), Gaps = 11/287 (3%)
Query: 5 AFEHCTNHDLFSLAQDQEGSQYLQENLSS-GDSRILDKLFWVVSGFTFELMSGQYGRFVF 63
+ E T ++ L + Q G ++LQ+ L DS + +F V ELM YG+++
Sbjct: 423 SLEEITGQ-IYHLTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLI 481
Query: 64 GKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSAL 123
+ ++ C+ +Q I+ KI + F + +G ++KL++ ++ P + ++S++
Sbjct: 482 PQLMKYCDNNQRRQIVDKIAPNVETF---ACHVYGIHGIQKLLQYLS--PDQVDSIISSI 536
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K L G+ ++ L+ N F+ A + + + H+ GC +N IDN
Sbjct: 537 KNKVIQLSKDSKGNYLVQSFLKQFSPEVNQFVCDAIMNNIQEICTHKVGCTVVNRCIDNA 596
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ +Q++ I+ ++ L + + GNYVVQH+LS + + +L G+ +LS+ K
Sbjct: 597 NPQQLEQLVDRITQHSLKLVQDQFGNYVVQHLLSKNKSYS-SKLIKSLLGNIAELSVQKF 655
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTAL 288
S V++KCL+ + Y II+E+ +D IL + DKY N+VIQTAL
Sbjct: 656 SSNVIEKCLQVADTETYESIIKEITEAD-ILNLLQDKYANFVIQTAL 701
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 114 PLLYHVMSALKRLFKFL--MMTKP-GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
P HV +F L +M P G +I Q ++ N++ I + ACH
Sbjct: 452 PDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQIVDKIAPNVETFACHV 511
Query: 171 QGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFA 230
G + + + + I+ I LS+ GNY+VQ L P + +C A
Sbjct: 512 YGIHGIQKLLQYLSPDQVDSIISSIKNKVIQLSKDSKGNYLVQSFLKQFSPEVNQFVCDA 571
Query: 231 LRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLN--SDQILQVANDKYGNYVIQTAL 288
+ + ++ K G VV +C+ NA +E+L++ + L++ D++GNYV+Q L
Sbjct: 572 IMNNIQEICTHKVGCTVVNRCI--DNANPQQLEQLVDRITQHSLKLVQDQFGNYVVQHLL 629
Query: 289 AETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ S +L+ L ++A L V K+ SNV
Sbjct: 630 SKNK-----SYSSKLIKSLLGNIAELSVQKFSSNV 659
>gi|357449403|ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula]
gi|355484026|gb|AES65229.1| Pumilio-like protein [Medicago truncatula]
Length = 984
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 24/321 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L S + +F V +LM+ +G +V KF E N
Sbjct: 661 IVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGNPE 720
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ Q L S+ +G ++K ++V+ H + L R +M
Sbjct: 721 QRKELAEKLAGQ---ILPLSLQMYGCRVIQKALEVIEH------EQKAQLVRELDGNIMR 771
Query: 133 ---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ G+ VI +C+E +K FI A L+ H GC + +++ +
Sbjct: 772 CVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQC 831
Query: 190 Q-ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
Q I+ I + SL++ + GNYV QHVL P I L GH V LS K S VV
Sbjct: 832 QFIVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVV 891
Query: 249 QKCLKYQNAVHY------IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
+KCL+Y +A II +D +L + D++ NYVIQ + R R
Sbjct: 892 EKCLEYGDASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRA----R 947
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L++ ++ H AL+ YG ++
Sbjct: 948 LLSHIRAHANALKKYTYGKHI 968
>gi|443921904|gb|ELU41432.1| pumilio-family RNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 1002
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 145/323 (44%), Gaps = 44/323 (13%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ +L +DQ G +YLQ+ L G V F G ++ K +E +
Sbjct: 571 EIPALCKDQHGCRYLQKKLEEG----------VPEHHPF-------GNYLCQKLLEYSTD 613
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA---HLPPLLYH-----VMSALK 124
Q +I + + S++ G+ +V+K+I ++ P Y ++ AL
Sbjct: 614 EQRNMICESVAHD---LVGISLNMHGTRAVQKMIDFLSTQRQANPSSYDAQIHSIIMALS 670
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
L+ G+ VI +CL N FIY A HC+ +A H GC L ID+
Sbjct: 671 MHVVTLIKDLNGNHVIQKCLNRLIPEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHAS 730
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
S+R Q++ I+ NA +L + GNYV H DA+ G+ LS+ K
Sbjct: 731 DSQRIQLVTEITFNALTLVQDPYGNYVSCHT------SRTDAVIRQFIGNVCALSVQKFS 784
Query: 245 SFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
S V++KC++ N +IEELLN +++ ++ D +GNY +QTAL D QR
Sbjct: 785 SNVIEKCIRVAEHNTRKMLIEELLNRNRLEKLLRDSFGNYCVQTAL------DYAEPTQR 838
Query: 303 --LVTKLQQHLAALRVMKYGSNV 323
LV ++ L +R YG +
Sbjct: 839 MLLVEGIRPILPLIRNTPYGKRI 861
>gi|90265098|emb|CAH67711.1| H0512B01.6 [Oryza sativa Indica Group]
Length = 795
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 152/317 (47%), Gaps = 19/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ ++ DQ GS+++Q+ L + +K+F + L + +G +V KF E ES
Sbjct: 453 VMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATES 512
Query: 74 QLALIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
QL+ + DQL FL S +G V+K+I VV + ++ LK
Sbjct: 513 QLSQLA------DQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKI--SIVGELKNSVLRC 564
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRK 189
+ + G+ VI +C+E F+ + L+ L H+ GC + +++ + +
Sbjct: 565 ISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQS 624
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I A L+ + GNYVVQHVL P +I L G V+LS K S VV+
Sbjct: 625 AVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVE 684
Query: 250 KCLKY--QNAVHYIIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
KCL + + +I E+++S Q Q + D++GNYV+Q L +T L V +++
Sbjct: 685 KCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL-QTCDDKFLVV---ILSS 740
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL L+ +G ++
Sbjct: 741 IKMHLNELKNYTFGKHI 757
>gi|218195953|gb|EEC78380.1| hypothetical protein OsI_18154 [Oryza sativa Indica Group]
Length = 862
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 530 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPT 589
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALK 124
Q+ + DQL L S+ +G ++K I+VV + L HVM ++
Sbjct: 590 QIKELA------DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR 643
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E H FI + L+ H GC + +++
Sbjct: 644 --------DQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCD 695
Query: 185 GSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K
Sbjct: 696 DPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKF 755
Query: 244 GSFVVQKCLKYQNAVHY--IIEELL---NSDQILQV-ANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + N V +I E+L N + L+V D++ NYV+Q L Q R
Sbjct: 756 ASNVIEKCLAFGNPVERQILIGEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR- 814
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 815 ---EAILTRIKAHLNTLKKYTYGKHI 837
>gi|50302921|ref|XP_451398.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640529|emb|CAH02986.1| KLLA0A09097p [Kluyveromyces lactis]
Length = 805
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 33/294 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++SL +DQ G ++LQ L + ++ + ELM+ +G ++ K E N+
Sbjct: 484 IYSLCKDQHGCRFLQRQLDENGEEVASTIYSEIKDHICELMNDPFGNYLMQKLFERINQR 543
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIK----------VVAHLPPLLYHVMSAL 123
I+ + Q F+ ++D G+ +++KL++ +VA L P + +L
Sbjct: 544 DRVEIVKNCSPQ---FMDIALDAHGTRALQKLVECTDTEEETQILVASLQPSIL----SL 596
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
R FK + V+ + LE N FIY AA + + ++ H GC + +D
Sbjct: 597 SRDFK-------SNHVVQKMLENFSNKDTQFIYDAACDDIIKISNHRNGCCVVQRCLDFG 649
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE-DPFLID-----AICFALRGHYVD 237
+ + I + L+ + GNYV+Q++L+ E D D I L+ + +D
Sbjct: 650 NTEQLDALCGKIVEKSFELTMNPYGNYVIQYILTKEKDQATPDFKYTKKIVDVLKFNAID 709
Query: 238 LSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ---ILQVANDKYGNYVIQTAL 288
LSL K GS VV+ L+ +I ++LNS+ +L++ +D YGNYV+QTAL
Sbjct: 710 LSLNKFGSNVVESILRTPAVSDVMITKILNSNDESGLLKLLHDSYGNYVLQTAL 763
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 201 SLSRHRSGNYVVQHVL----SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
SLSR N+VVQ +L + + F+ DA C + + +S + G VVQ+CL + N
Sbjct: 595 SLSRDFKSNHVVQKMLENFSNKDTQFIYDAACDDI----IKISNHRNGCCVVQRCLDFGN 650
Query: 257 AVHYIIEELLNS------DQILQVANDKYGNYVIQTALAETMRQDRLSVH----QRLVTK 306
E L++ ++ ++ + YGNYVIQ L T +D+ + +++V
Sbjct: 651 T------EQLDALCGKIVEKSFELTMNPYGNYVIQYIL--TKEKDQATPDFKYTKKIVDV 702
Query: 307 LQQHLAALRVMKYGSNV 323
L+ + L + K+GSNV
Sbjct: 703 LKFNAIDLSLNKFGSNV 719
>gi|82539941|ref|XP_724322.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478929|gb|EAA15887.1| 00806 domains.-related [Plasmodium yoelii yoelii]
Length = 923
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 145/281 (51%), Gaps = 8/281 (2%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++ +A+DQ + LQ+ L + +D+++ ELM +G ++ K IE C
Sbjct: 637 NVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLCQKLIEVCTP 696
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q+ II K + D+L + AS+ G+ +V+KLI+++ P + + ++LK L+
Sbjct: 697 EQIEKIIDKSS--DEL-INASISVHGTRTVQKLIEMIK-TPSQIRKITNSLKNSIIILIK 752
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ V+ +CL + + +FIY L++ + ++ H GC + ID+ ++++ ++
Sbjct: 753 DINGNHVVQKCLVTLSSTQCNFIYDEILKNFVEVSTHRHGCCVIQRCIDSANEAQKELLI 812
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ IS N L + GNYVVQ++L++ + + I L ++ K S V++KCL
Sbjct: 813 NKISSNCLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHAVQKFSSNVIEKCL 872
Query: 253 --KYQNAVHYIIEELLNSDQIL--QVANDKYGNYVIQTALA 289
+I LL + + V DKYGNYVIQ AL+
Sbjct: 873 IIGTTKCRKMMINGLLKKGKNILKNVILDKYGNYVIQRALS 913
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 207 SGNYVVQHVL----SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYII 262
+GN+VVQ L S + F+ D I ++V++S + G V+Q+C+ N
Sbjct: 755 NGNHVVQKCLVTLSSTQCNFIYDEIL----KNFVEVSTHRHGCCVIQRCIDSANEAQK-- 808
Query: 263 EELLN--SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 320
E L+N S L++ D +GNYV+Q L + + ++L+ +++H V K+
Sbjct: 809 ELLINKISSNCLELVQDAFGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHA----VQKFS 864
Query: 321 SNV 323
SNV
Sbjct: 865 SNV 867
>gi|115457242|ref|NP_001052221.1| Os04g0201200 [Oryza sativa Japonica Group]
gi|38345179|emb|CAE03335.2| OSJNBb0005B05.2 [Oryza sativa Japonica Group]
gi|113563792|dbj|BAF14135.1| Os04g0201200 [Oryza sativa Japonica Group]
Length = 795
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 152/317 (47%), Gaps = 19/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ ++ DQ GS+++Q+ L + +K+F + L + +G +V KF E ES
Sbjct: 453 VMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATES 512
Query: 74 QLALIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
QL+ + DQL FL S +G V+K+I VV + ++ LK
Sbjct: 513 QLSQLA------DQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKI--SIVGELKNSVLRC 564
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRK 189
+ + G+ VI +C+E F+ + L+ L H+ GC + +++ + +
Sbjct: 565 ISDQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQS 624
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I A L+ + GNYVVQHVL P +I L G V+LS K S VV+
Sbjct: 625 AVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVE 684
Query: 250 KCLKY--QNAVHYIIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
KCL + + +I E+++S Q Q + D++GNYV+Q L +T L V +++
Sbjct: 685 KCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL-QTCDDKFLVV---ILSS 740
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL L+ +G ++
Sbjct: 741 IKMHLNELKNYTFGKHI 757
>gi|448516169|ref|XP_003867508.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis Co 90-125]
gi|380351847|emb|CCG22071.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis]
Length = 822
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 137/312 (43%), Gaps = 40/312 (12%)
Query: 14 LFSLAQDQEGSQYLQ-------ENLSSGDSRILDKL--------------FWVVSGFTFE 52
+ L DQ G ++LQ E ++ G+ D+L F +
Sbjct: 478 ILDLCGDQHGCRFLQRELIKEQEGIAKGEGNKADELDNKEKVDESLATMVFNELDDDIVN 537
Query: 53 LMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHL 112
LM +G ++ K +E + Q +I K Q F ++D G+ +++KLI+ V
Sbjct: 538 LMLDSFGNYLIQKLVECITDEQRLELIKKSRSQ---FNRIALDSHGTRALQKLIECVGKT 594
Query: 113 ------------PPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAAL 160
++ +L L G+ V+ +CL N N IY
Sbjct: 595 KDEADVKGDELQDESARLIIESLAPTIVSLSKDLNGNHVVQKCLISLSNETNQVIYDTIK 654
Query: 161 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLED 220
++C +ACH GC L +D + + H I+ + GNYVVQ+VL+ D
Sbjct: 655 DNCEVVACHRHGCCVLQRCLDYGNNQQIDALSHEITTKLDIFTADPYGNYVVQYVLTHGD 714
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEEL--LNSDQILQVAN 276
ID I L+ ++ LS+ K GS V++K L+ N +I+EL L+SDQ L+V N
Sbjct: 715 RQSIDTIFAYLQSNFYQLSIHKFGSNVLEKSLRLNNTKQSSILIDELLKLSSDQFLKVLN 774
Query: 277 DKYGNYVIQTAL 288
D YGNYV+QT L
Sbjct: 775 DSYGNYVLQTCL 786
>gi|15237851|ref|NP_200736.1| pumilio 16 [Arabidopsis thaliana]
gi|313471419|sp|Q9FIE9.2|PUM16_ARATH RecName: Full=Putative pumilio homolog 16; Short=APUM-16;
Short=AtPUM16
gi|332009782|gb|AED97165.1| pumilio 16 [Arabidopsis thaliana]
Length = 332
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 7/207 (3%)
Query: 89 FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSY 148
F++ + +K GS +++KL+ + + + A+ RLF +M K S V +Q +
Sbjct: 87 FMVITTNKNGSKTLQKLMGMSDDMDVFFFE---AIMRLFIHVMTDKYASYVTIQGMRVFQ 143
Query: 149 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRS 207
K + +Y L + +LA + GCI LN I ++ R Q+L +++ NA LS
Sbjct: 144 QDKRELMYDQILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAY 203
Query: 208 GNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN-AVHYIIEELL 266
GN+VVQHVL L D I L G+ V+LS K GS++V++ L+ + + ++ +LL
Sbjct: 204 GNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLL 263
Query: 267 --NSDQILQVANDKYGNYVIQTALAET 291
++ ++++A +YGN+V+ AL T
Sbjct: 264 ACKTEMLIRLARSEYGNFVVCKALELT 290
>gi|367002536|ref|XP_003686002.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
gi|357524302|emb|CCE63568.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
Length = 794
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 149/297 (50%), Gaps = 35/297 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++SL +DQ G ++LQ+ L + + +F + ELM+ +G ++ K +E
Sbjct: 475 IYSLCKDQHGCRFLQKQLDLVGEQAANTIFEEIKNHCIELMTDSFGNYLIQKLLERITLE 534
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFK 128
Q LII+ I+ F+ +++ G+ +++KL++ + A + ++ +LK
Sbjct: 535 Q-RLIIINISAP--YFIDIALNPHGTRALQKLVECIKTDEEAKI------IVDSLKPSIV 585
Query: 129 FLMMTKPGSSV---ILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L G+ V ILQ +P + FI++AA ++C+ +A H GC L +D+
Sbjct: 586 ELSKDLNGNHVVQKILQQFKPEFIQ---FIFEAACQNCIEIATHRHGCCVLQRCLDSGTT 642
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYV--------D 237
++ + + + +N LS + GNYV+Q+V++ E ++ + Y+ D
Sbjct: 643 TQCESLCEQLLINIDRLSFNPFGNYVIQYVITKE----VETGNYNYSYKYINILKHKIKD 698
Query: 238 LSLTKCGSFVVQKCLKYQNAVHYIIEELL---NSDQILQVANDKYGNYVIQTALAET 291
LSL K GS VV+K L+ II ELL ++I + ND YGNYV+QTAL T
Sbjct: 699 LSLHKFGSNVVEKLLRTPVLSETIILELLKKGGKNEIEILLNDSYGNYVLQTALDVT 755
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 26/280 (9%)
Query: 54 MSGQYGRFVFGKFIESC--NESQLALIILKITF--QDQ---LFLLASVDKFGSSSVKKLI 106
M QYG +V K+ +S N++ L I I +DQ FL +D G + +
Sbjct: 445 MKNQYGGYVQRKYDDSLIYNDATLDQFIGSIYSLCKDQHGCRFLQKQLDLVGEQAANTIF 504
Query: 107 KVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYL 166
+ + + H + + F G+ +I + LE + I + + + +
Sbjct: 505 EEIKN------HCIELMTDSF--------GNYLIQKLLERITLEQRLIIINISAPYFIDI 550
Query: 167 ACHEQGCINLNNFIDNMKGSRR-KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLID 225
A + G L ++ +K K I+ + + LS+ +GN+VVQ +L P I
Sbjct: 551 ALNPHGTRALQKLVECIKTDEEAKIIVDSLKPSIVELSKDLNGNHVVQKILQQFKPEFIQ 610
Query: 226 AICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQVANDKYGNYV 283
I A + ++++ + G V+Q+CL + E+LL I +++ + +GNYV
Sbjct: 611 FIFEAACQNCIEIATHRHGCCVLQRCLDSGTTTQCESLCEQLL--INIDRLSFNPFGNYV 668
Query: 284 IQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
IQ + + + + + + L+ + L + K+GSNV
Sbjct: 669 IQYVITKEVETGNYNYSYKYINILKHKIKDLSLHKFGSNV 708
>gi|4539306|emb|CAB39609.1| pumilio-like protein [Arabidopsis thaliana]
gi|7269439|emb|CAB79443.1| pumilio-like protein [Arabidopsis thaliana]
Length = 849
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 146/321 (45%), Gaps = 24/321 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
LF + DQ GS+++Q+ L + +F + +LM+ +G +V KF E N +
Sbjct: 525 LFPFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNST 584
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + ++ Q + S+ +G ++K + V+ P + L +
Sbjct: 585 QRKELADQLMGQ---IVPLSLQMYGCRVIQKALDVIE--PDQRVRLARELDGQVMRCVRD 639
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR----- 188
+ G+ VI +C+E K F+ A L+ H GC + ++ +
Sbjct: 640 QNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFIT 699
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
++IL + V LS+ + GNYV QHVL + I L GH V LSL K S V+
Sbjct: 700 EEILESVCV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVI 755
Query: 249 QKCLKYQNAVHY--IIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
+KCL+Y V II+E+ D+ +L + D+YGNYV+Q RL+
Sbjct: 756 EKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT---- 811
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L ++++ H +AL+ YG ++
Sbjct: 812 LFSRVRMHASALKKYTYGKHI 832
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 97/246 (39%), Gaps = 46/246 (18%)
Query: 117 YHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINL 176
Y + + K LF F + GS I Q LE + +++ L H L G +
Sbjct: 516 YMITNLSKILFPF-SADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVI 574
Query: 177 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP--------------- 221
F + ++RK++ + LS G V+Q L + +P
Sbjct: 575 QKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVM 634
Query: 222 ------------------FLIDAICF---ALRGHYVDLSLTKCGSFVVQKCLK---YQNA 257
D + F A RG LS+ G V+Q+ L+ + +
Sbjct: 635 RCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQ 694
Query: 258 VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVM 317
+I EE+L S + ++ D+YGNYV Q L + ++R +R+ KL H+ L +
Sbjct: 695 CRFITEEILES--VCVLSKDQYGNYVTQHVLEKGTSEER----ERIGRKLSGHIVQLSLH 748
Query: 318 KYGSNV 323
K+ SNV
Sbjct: 749 KFASNV 754
>gi|427782705|gb|JAA56804.1| Putative pumilio log 1 [Rhipicephalus pulchellus]
Length = 1138
Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 17/320 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L +F + G + LM+ +G +V KF E
Sbjct: 799 NH-IVEFSQDQHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKFFEFG 857
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+ Q + LK+ L ++ +G ++K ++ ++ P V+ L
Sbjct: 858 SAEQKQALALKVKGH---VLPLALQMYGCRVIQKALESIS--PDQQKEVVKELDGHVLKC 912
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ G +
Sbjct: 913 VKDQNGNHVVQKCIECVDPSALQFIINAFQGQVFCLSTHPYGCRVIQRILEHCTGEQTGP 972
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L + + L + + GNYVVQHVL P I A+RG + LS K S VV+K
Sbjct: 973 VLEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDKGRIVAAVRGRVLPLSQHKFASNVVEK 1032
Query: 251 CLKYQNAVH--YIIEELLN-----SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
C+ + + +IEE+ + + D+Y NYV+Q + R + L
Sbjct: 1033 CVTHASRSERALLIEEVCAYVDGPHSALYTMMKDQYANYVVQKMIEVAEPPQR----KLL 1088
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ K++ H+ +LR YG ++
Sbjct: 1089 LHKIRPHVPSLRKYTYGKHI 1108
>gi|281202123|gb|EFA76328.1| hypothetical protein PPL_10093 [Polysphondylium pallidum PN500]
Length = 833
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 150/291 (51%), Gaps = 11/291 (3%)
Query: 1 LQTIAFEHCTNHDLFSLAQDQEGSQYLQENLSS-GDSRILDKLFWVVSGFTFELMSGQYG 59
++ + E T ++ L + Q G ++LQ+ L D+ + +F V ELM YG
Sbjct: 320 MKITSLEEITGQ-IYHLTKYQAGCRFLQKKLEEKPDAEHVTLIFKEVYEHLIELMVDPYG 378
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
+++ + ++ C+ +Q +I+ +I + + F + +G ++K+++ ++ P + +
Sbjct: 379 QYLIPQLMKYCDNNQRKMIVDRIAPKVETF---ACHIYGIHGIQKVLQFLS--PEQVDTI 433
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
++++ L G+ +I L+ N FI A +++ + + H+ GC +N
Sbjct: 434 IASISDKVISLSKDAKGNYLIQSFLKTFSPETNQFICDAIMKNVIEICTHKVGCTVVNRA 493
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
ID + ++++ I+ +A L + + GNYVVQH+L+ + I + G+ +LS
Sbjct: 494 IDCANKVQLEKLIDSITNHALQLVQDQFGNYVVQHLLTNNKAYATKLIKSVI-GNIAELS 552
Query: 240 LTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTAL 288
+ K S V++KCL+ N Y I++EL D IL + DKY N+VIQTAL
Sbjct: 553 VQKFSSNVIEKCLQVANTETYESIVKELTEVD-ILTLLQDKYANFVIQTAL 602
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 12/215 (5%)
Query: 114 PLLYHVMSALKRLFKFL--MMTKP-GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
P HV K +++ L +M P G +I Q ++ N++ I ACH
Sbjct: 353 PDAEHVTLIFKEVYEHLIELMVDPYGQYLIPQLMKYCDNNQRKMIVDRIAPKVETFACHI 412
Query: 171 QGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFA 230
G + + + + I+ IS SLS+ GNY++Q L P IC A
Sbjct: 413 YGIHGIQKVLQFLSPEQVDTIIASISDKVISLSKDAKGNYLIQSFLKTFSPETNQFICDA 472
Query: 231 LRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNS--DQILQVANDKYGNYVIQTAL 288
+ + +++ K G VV + + N V +E+L++S + LQ+ D++GNYV+Q L
Sbjct: 473 IMKNVIEICTHKVGCTVVNRAIDCANKVQ--LEKLIDSITNHALQLVQDQFGNYVVQHLL 530
Query: 289 AETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ + +L+ + ++A L V K+ SNV
Sbjct: 531 T-----NNKAYATKLIKSVIGNIAELSVQKFSSNV 560
>gi|6321424|ref|NP_011501.1| Puf4p [Saccharomyces cerevisiae S288c]
gi|1723801|sp|P25339.2|PUF4_YEAST RecName: Full=Pumilio homology domain family member 4
gi|1322473|emb|CAA96714.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285812184|tpg|DAA08084.1| TPA: Puf4p [Saccharomyces cerevisiae S288c]
gi|392299246|gb|EIW10340.1| Puf4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 888
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 568 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 627
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFK 128
Q +++ KI+ F+ S++ G+ +++KLI+ + A + V+ +L+
Sbjct: 628 Q-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI------VVDSLRPYTV 678
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L G+ VI +CL+ FI+ A + C+ +A H GC L +D+ +
Sbjct: 679 QLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQC 738
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
+ + L+ GNYVVQ++++ E I L+ ++LS+ K G
Sbjct: 739 DNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFG 798
Query: 245 SFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
S V++K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 799 SNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 852
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 607 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 666
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 667 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 722
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 723 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 777
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 778 THKIVHLLKPRAIELSIHKFGSNV 801
>gi|349578206|dbj|GAA23372.1| K7_Puf4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 889
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 569 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 628
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFK 128
Q +++ KI+ F+ S++ G+ +++KLI+ + A + V+ +L+
Sbjct: 629 Q-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI------VVDSLRPYTV 679
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L G+ VI +CL+ FI+ A + C+ +A H GC L +D+ +
Sbjct: 680 QLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQC 739
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
+ + L+ GNYVVQ++++ E I L+ ++LS+ K G
Sbjct: 740 DNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFG 799
Query: 245 SFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
S V++K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 800 SNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 853
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 608 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 667
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 668 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 723
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 724 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 778
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 779 THKIVHLLKPRAIELSIHKFGSNV 802
>gi|168030336|ref|XP_001767679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680999|gb|EDQ67430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1134
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 28/320 (8%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+ DQ GS+++Q+ L + + F + LMS +G +V KF E + Q
Sbjct: 805 FSADQHGSRFIQQKLETATPEDKNMGFQEIVPRAITLMSDVFGNYVIQKFFEHGTQQQRR 864
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFL 130
+ ++ L+ S+ +G ++K ++VV + L HVM ++
Sbjct: 865 ELASQLVGH---VLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR------ 915
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRK 189
+ G+ VI +C+E K FI A + L+ H GC + +++ ++K
Sbjct: 916 --DQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQK 973
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I + +L++ + GNYVVQHVL I L G V +S K S VV+
Sbjct: 974 GIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSDIITKLAGQIVQMSQHKFASNVVE 1033
Query: 250 KCLKYQNAV--HYIIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL+Y +++E+L + ++ LQ + D++ NYV+Q L ET + S + L
Sbjct: 1034 KCLEYGGPAERQILVDEMLGHTDENEPLQAMMKDQFANYVVQKVL-ETCDE---SQRELL 1089
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ +++ HL AL+ YG ++
Sbjct: 1090 LGRIRVHLHALKKYTYGKHI 1109
>gi|365765603|gb|EHN07110.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 898
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 578 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 637
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFK 128
Q +++ KI+ F+ S++ G+ +++KLI+ + A + V+ +L+
Sbjct: 638 Q-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI------VVDSLRPYTV 688
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L G+ VI +CL+ FI+ A + C+ +A H GC L +D+ +
Sbjct: 689 QLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQC 748
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
+ + L+ GNYVVQ++++ E I L+ ++LS+ K G
Sbjct: 749 DNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFG 808
Query: 245 SFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
S V++K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 809 SNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 862
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 617 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 676
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 677 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 732
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 733 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 787
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 788 THKIVHLLKPRAIELSIHKFGSNV 811
>gi|323333456|gb|EGA74850.1| Puf4p [Saccharomyces cerevisiae AWRI796]
Length = 896
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 576 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 635
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFK 128
Q +++ KI+ F+ S++ G+ +++KLI+ + A + V+ +L+
Sbjct: 636 Q-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI------VVDSLRPYTV 686
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L G+ VI +CL+ FI+ A + C+ +A H GC L +D+ +
Sbjct: 687 QLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQC 746
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
+ + L+ GNYVVQ++++ E I L+ ++LS+ K G
Sbjct: 747 DNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFG 806
Query: 245 SFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
S V++K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 807 SNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 860
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 615 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 674
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 675 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 730
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 731 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 785
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 786 THKIVHLLKPRAIELSIHKFGSNV 809
>gi|190406983|gb|EDV10250.1| protein PUF4 [Saccharomyces cerevisiae RM11-1a]
Length = 894
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 574 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 633
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFK 128
Q +++ KI+ F+ S++ G+ +++KLI+ + A + V+ +L+
Sbjct: 634 Q-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI------VVDSLRPYTV 684
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L G+ VI +CL+ FI+ A + C+ +A H GC L +D+ +
Sbjct: 685 QLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQC 744
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
+ + L+ GNYVVQ++++ E I L+ ++LS+ K G
Sbjct: 745 DNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFG 804
Query: 245 SFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
S V++K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 805 SNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 858
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 613 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 672
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 673 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 728
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 729 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 783
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 784 THKIVHLLKPRAIELSIHKFGSNV 807
>gi|151943274|gb|EDN61587.1| pumilio-homology domain family [Saccharomyces cerevisiae YJM789]
gi|259146487|emb|CAY79744.1| Puf4p [Saccharomyces cerevisiae EC1118]
Length = 892
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 572 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 631
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFK 128
Q +++ KI+ F+ S++ G+ +++KLI+ + A + V+ +L+
Sbjct: 632 Q-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI------VVDSLRPYTV 682
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L G+ VI +CL+ FI+ A + C+ +A H GC L +D+ +
Sbjct: 683 QLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQC 742
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
+ + L+ GNYVVQ++++ E I L+ ++LS+ K G
Sbjct: 743 DNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFG 802
Query: 245 SFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALAETMRQD 295
S V++K LK +I E+LN+ I + ND YGNYV+QTAL + +Q+
Sbjct: 803 SNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 856
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 611 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 670
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 671 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 726
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 727 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 781
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 782 THKIVHLLKPRAIELSIHKFGSNV 805
>gi|328353330|emb|CCA39728.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 600
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 150/295 (50%), Gaps = 16/295 (5%)
Query: 1 LQTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGR 60
L + FE T+ ++ SL++DQ G ++LQ L + +F + ELM +G
Sbjct: 219 LNSTPFEALTD-EIVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGN 277
Query: 61 FVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYH-- 118
++ K + C + L++ + LF +A +++ G+ +++K+I + Y
Sbjct: 278 YLVQKLLNYCTNHEKDLLLEQSA--PDLFSVA-LNQHGTRALQKIIDCLG----TNYQFS 330
Query: 119 -VMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINL 176
V +LK L+ G+ V+ +C+ ++HK+ FI A H + ++ H+ GC L
Sbjct: 331 LVRDSLKNHVVELIQDLNGNHVVQKCIN-KFSHKDFQFIIDAICLHIVRISTHKHGCCVL 389
Query: 177 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYV 236
++ + Q+ I NA L + + GNYVVQ++LS+ + + + + + +
Sbjct: 390 QKCLNKCNQQQLVQLGDEIIANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSIS 449
Query: 237 DLSLTKCGSFVVQKCLK---YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
LS+ K S V++KCLK +++ + ++EE+L + + D+YGNYV+QTA+
Sbjct: 450 MLSVQKFSSNVMEKCLKNAPNRSSQNAMLEEILRPQNLNALIKDQYGNYVVQTAI 504
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM------ 183
LM+ G+ ++ + L NH+ D + + + +A ++ G L ID +
Sbjct: 270 LMVDPFGNYLVQKLLNYCTNHEKDLLLEQSAPDLFSVALNQHGTRALQKIIDCLGTNYQF 329
Query: 184 ---KGSRRKQILHLISVNAASLSRHRSGNYVVQHVL---SLED-PFLIDAICFALRGHYV 236
+ S + ++ LI + +GN+VVQ + S +D F+IDAIC H V
Sbjct: 330 SLVRDSLKNHVVELI--------QDLNGNHVVQKCINKFSHKDFQFIIDAICL----HIV 377
Query: 237 DLSLTKCGSFVVQKCLKYQNAVHYII--EELLNSDQILQVANDKYGNYVIQTALAETMRQ 294
+S K G V+QKCL N + +E++ + +L D++GNYV+Q L+
Sbjct: 378 RISTHKHGCCVLQKCLNKCNQQQLVQLGDEIIANAIVL--MKDQFGNYVVQYLLS----M 431
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNVYKWTTASHP 332
+ L ++++LV ++ ++ L V K+ SNV + + P
Sbjct: 432 NNLPINEKLVYQILPSISMLSVQKFSSNVMEKCLKNAP 469
>gi|414587978|tpg|DAA38549.1| TPA: hypothetical protein ZEAMMB73_234832 [Zea mays]
Length = 764
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 147/314 (46%), Gaps = 19/314 (6%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
++ DQ GS+++Q+ L +K+F + L + +G +V KF E ESQL
Sbjct: 425 VSMDQYGSRFIQQKLEIASPDDREKIFPEILSNVIVLTTDVFGNYVIQKFFEFATESQL- 483
Query: 77 LIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
I DQL L S+ +G V+K+++VV + ++ LK +
Sbjct: 484 -----IQLADQLKGRILELSLQMYGCRVVQKVLEVVGMDQKV--DIVHELKNYILKCIGD 536
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQIL 192
+ G+ VI +C+E + F+ L L L H+ GC + +++ + I+
Sbjct: 537 QNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSAIM 596
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ I L+ + GNYVVQHVL P I L G V LS K S V++KCL
Sbjct: 597 NEIMQQTFHLTDDKFGNYVVQHVLEHGKPEERSVIIQKLSGQVVTLSKQKFASNVIEKCL 656
Query: 253 KYQNAVHY--IIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ +I E+++S Q Q + D++GNYV+Q L ET L + +++ ++
Sbjct: 657 EFGTPEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL-ETCDDKYLEM---ILSSIKL 712
Query: 310 HLAALRVMKYGSNV 323
HL L+ YG ++
Sbjct: 713 HLNELKNYTYGKHI 726
>gi|254571113|ref|XP_002492666.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
gi|238032464|emb|CAY70487.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
Length = 588
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 150/295 (50%), Gaps = 16/295 (5%)
Query: 1 LQTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGR 60
L + FE T+ ++ SL++DQ G ++LQ L + +F + ELM +G
Sbjct: 207 LNSTPFEALTD-EIVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGN 265
Query: 61 FVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYH-- 118
++ K + C + L++ + LF +A +++ G+ +++K+I + Y
Sbjct: 266 YLVQKLLNYCTNHEKDLLLEQSA--PDLFSVA-LNQHGTRALQKIIDCLG----TNYQFS 318
Query: 119 -VMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINL 176
V +LK L+ G+ V+ +C+ ++HK+ FI A H + ++ H+ GC L
Sbjct: 319 LVRDSLKNHVVELIQDLNGNHVVQKCIN-KFSHKDFQFIIDAICLHIVRISTHKHGCCVL 377
Query: 177 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYV 236
++ + Q+ I NA L + + GNYVVQ++LS+ + + + + + +
Sbjct: 378 QKCLNKCNQQQLVQLGDEIIANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSIS 437
Query: 237 DLSLTKCGSFVVQKCLK---YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
LS+ K S V++KCLK +++ + ++EE+L + + D+YGNYV+QTA+
Sbjct: 438 MLSVQKFSSNVMEKCLKNAPNRSSQNAMLEEILRPQNLNALIKDQYGNYVVQTAI 492
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM------ 183
LM+ G+ ++ + L NH+ D + + + +A ++ G L ID +
Sbjct: 258 LMVDPFGNYLVQKLLNYCTNHEKDLLLEQSAPDLFSVALNQHGTRALQKIIDCLGTNYQF 317
Query: 184 ---KGSRRKQILHLISVNAASLSRHRSGNYVVQHVL---SLED-PFLIDAICFALRGHYV 236
+ S + ++ LI + +GN+VVQ + S +D F+IDAIC H V
Sbjct: 318 SLVRDSLKNHVVELI--------QDLNGNHVVQKCINKFSHKDFQFIIDAICL----HIV 365
Query: 237 DLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVA----NDKYGNYVIQTALAETM 292
+S K G V+QKCL N + +L D+I+ A D++GNYV+Q L+
Sbjct: 366 RISTHKHGCCVLQKCLNKCNQQQLV--QL--GDEIIANAIVLMKDQFGNYVVQYLLS--- 418
Query: 293 RQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYKWTTASHP 332
+ L ++++LV ++ ++ L V K+ SNV + + P
Sbjct: 419 -MNNLPINEKLVYQILPSISMLSVQKFSSNVMEKCLKNAP 457
>gi|383848137|ref|XP_003699708.1| PREDICTED: pumilio homolog 2-like [Megachile rotundata]
Length = 1241
Score = 94.4 bits (233), Expect = 7e-17, Method: Composition-based stats.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 18/320 (5%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 880 TNH-IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEF 938
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
Q + + K+ + + LA + +G ++K ++ + P ++ L
Sbjct: 939 GTPEQKSTLAQKV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLK 993
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E F+ A L+ H GC + +++ + +
Sbjct: 994 CVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQ 1053
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
IL + L + + GNYV+QHVL P + ++RG + LS K S VV+
Sbjct: 1054 GILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKTQLISSVRGKVLTLSQHKFASNVVE 1113
Query: 250 KCLKY----QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KC+ + + AV +IEE+ N + + + D+Y NYV+Q + R + L
Sbjct: 1114 KCVTHATRQERAV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQR----KVL 1167
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ K++ HL +LR YG ++
Sbjct: 1168 MHKIRPHLGSLRKYTYGKHI 1187
>gi|407837279|gb|EKF99706.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 561
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 135/280 (48%), Gaps = 10/280 (3%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++ +A+DQ G ++LQ L S+GD + + V ELM+ QY F+ K +
Sbjct: 200 VYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLFDMMP 259
Query: 72 ESQLALIILKIT-FQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+ + K+ Q + ++ G+ SV+K+++ +A + + AL + L
Sbjct: 260 QD----VRYKVACVAAQKIISIALTPHGTFSVQKMVETIASREEMDI-LREALSKDVVRL 314
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + L+ + +FIY A C+ +A ++QGC L ++ S+R
Sbjct: 315 VKDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRAT 374
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+++ I ++ GNYV+Q+VL D D I A H V L + K S V++K
Sbjct: 375 LVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEK 434
Query: 251 CLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
L+ Q +E + + D + ++ D +GNYV+QTAL
Sbjct: 435 VLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTAL 474
>gi|115442517|ref|NP_001045538.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|57899216|dbj|BAD87365.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|113535069|dbj|BAF07452.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|218189826|gb|EEC72253.1| hypothetical protein OsI_05392 [Oryza sativa Indica Group]
gi|222619956|gb|EEE56088.1| hypothetical protein OsJ_04928 [Oryza sativa Japonica Group]
Length = 894
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 564 VVEFSADQYGSRFIQQKLETASTEEKDMVFAEIMPQALTLMTDVFGNYVVQKFFEHGSSA 623
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q+ DQL L S+ +G ++K I+VV L + L +
Sbjct: 624 QIK------ELADQLIGRVLALSLQMYGCRVIQKAIEVVD-----LDQQTKMVAELDGQV 672
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
M + G+ VI +C+E H FI + L+ H GC + +++ +
Sbjct: 673 MRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPK 732
Query: 188 RKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+QI+ I + L+ + GNYVVQHVL P AI L G V +S K S
Sbjct: 733 TQQIMMDEILQSVCLLATDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASN 792
Query: 247 VVQKCLKYQNAV--HYIIEELL---NSDQILQV-ANDKYGNYVIQTALAETMRQDRLSVH 300
V++KCL + N V +I E+L N + L+V D++ NYV+Q L Q R
Sbjct: 793 VIEKCLAFGNPVERQVLIGEMLGSSNESEHLEVMMKDQFANYVVQKVLETCDDQQR---- 848
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 849 EMILTRIKAHLNTLKKYTYGKHI 871
>gi|254585741|ref|XP_002498438.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
gi|238941332|emb|CAR29505.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
Length = 900
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 144/288 (50%), Gaps = 21/288 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++SL +DQ G ++LQ L D ++ +T ELM+ +G ++ K +E
Sbjct: 580 NIYSLCKDQHGCRFLQMQLDVLGPEAADAIYDETRDYTVELMTDSFGNYLIQKLLEKVTV 639
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLF 127
Q + + +I F+ + + G+ +++KL++ V A + V+++LK
Sbjct: 640 DQR-IFLARIAAPH--FVRIASNPHGTRALQKLVECVSTEEEAQI------VINSLKGSI 690
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
L G+ ++ +CL+ FI+ AA +HC +A H GC L +D+ ++
Sbjct: 691 VELSKDLNGNHIVQKCLQKLQPKDVQFIFDAACQHCTEIATHRHGCCVLQRCLDHGSKAQ 750
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLE---DPFLID-AICFALRGHYVDLSLTKC 243
+ + +++ + L+ GNYVVQ++++ E D + + L+ V+LSL K
Sbjct: 751 CQALCNILLKHVDHLTLDPFGNYVVQYIITKEVEQDSYDYTYKVVHLLKPKVVELSLHKF 810
Query: 244 GSFVVQKCLKYQNAVHYIIEELLNSDQILQVA---NDKYGNYVIQTAL 288
GS V++K ++ + +I E+LN+ V ND YGNYV+QTAL
Sbjct: 811 GSNVIEKIIRTRVVSETMIMEILNNRGDTDVPALLNDGYGNYVLQTAL 858
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 154 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNAASLSRHRSGNYVV 212
F+ + A H + +A + G L ++ + QI ++ + + LS+ +GN++V
Sbjct: 644 FLARIAAPHFVRIASNPHGTRALQKLVECVSTEEEAQIVINSLKGSIVELSKDLNGNHIV 703
Query: 213 QHVLSLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNS 268
Q L P F+ DA C H +++ + G V+Q+CL + + + L N
Sbjct: 704 QKCLQKLQPKDVQFIFDAACQ----HCTEIATHRHGCCVLQRCLDHGSKAQ--CQALCNI 757
Query: 269 --DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ + D +GNYV+Q + + + QD ++V L+ + L + K+GSNV
Sbjct: 758 LLKHVDHLTLDPFGNYVVQYIITKEVEQDSYDYTYKVVHLLKPKVVELSLHKFGSNV 814
>gi|71407210|ref|XP_806089.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70869728|gb|EAN84238.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 370
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++ +A+DQ G ++LQ L S+GD + + V ELM+ QY F+ K +
Sbjct: 9 VYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLFDMMP 68
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ + + ++ + + ++ G+ SV+K+++ +A + + AL + L+
Sbjct: 69 QD-VRYKVARVAAPKIISI--ALTPHGTFSVQKMVETIASREEMDI-LREALSKDVVRLV 124
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + L+ + +FIY A C+ +A ++QGC L ++ S+R +
Sbjct: 125 KDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATL 184
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
++ I ++ GNYV+Q+VL D D I A H V L + K S V++K
Sbjct: 185 VNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKV 244
Query: 252 LK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
L+ Q +E + + D + ++ D +GNYV+QTAL
Sbjct: 245 LRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTAL 283
>gi|301099064|ref|XP_002898624.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105049|gb|EEY63101.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 907
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 160/353 (45%), Gaps = 59/353 (16%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRIL-DKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+F++++DQ G + LQE L D L D ++ E+M +G ++F K +E E
Sbjct: 467 VFAMSKDQNGCRLLQEQLDYEDRGDLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKE 526
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA---------------------- 110
Q +II +++ + A+++ G+ SV+K+++V A
Sbjct: 527 KQRLVIIRRVSSN---LVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYE 583
Query: 111 ------------HLPPLLYHVMSALKRLFKFLMMTKPGSSVI---LQCLEPSYNHKNDFI 155
LP L ++ ALK L + G+ VI LQ ++P YN F+
Sbjct: 584 ERPEGGKGRRTTSLPDL---IVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQ---FV 637
Query: 156 YQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHV 215
+ A + C + H GC L +D +++ +++ + A L + GNYVVQ+V
Sbjct: 638 FDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYV 697
Query: 216 L---SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQ 270
L + E+ F + GH +LS+ K S V++KCL+ + I E+ + +
Sbjct: 698 LDSCTAEEAF---GVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPK 754
Query: 271 ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++ D++ NYV+Q AL + L LV ++ HLAA++ G +
Sbjct: 755 MNKMLQDQFANYVVQRALCVCAEEQCL----LLVKAIRPHLAAMKNTSGGRRI 803
>gi|340373711|ref|XP_003385383.1| PREDICTED: pumilio homolog 2-like [Amphimedon queenslandica]
Length = 459
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 28/337 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A+DQ GS+++Q+ L D +F + ++ L++ +G +V KF E
Sbjct: 132 VVDFAKDQHGSRFIQQKLEQCSDEDKDMVFSEILPASYSLITDVFGNYVIQKFFE----- 186
Query: 74 QLALIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLL-YHVMSALKRLFKF 129
I K T D+L S+ +G ++K I+ V PP L +++ L
Sbjct: 187 -FGTIDQKATLVDRLHGHVPSLSLHTYGCRVIQKAIESV---PPYLQAEIINELDGFVLK 242
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ VI +C+E FI + +A H GC + +++ +
Sbjct: 243 SIRDQNGNHVIQKCIECVDPPLLTFIIVSFKGQVYDMATHPYGCRVIQRILEHCTAQQTD 302
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+L I ++A L GNYVVQHVL P I +RG V LS K S VV+
Sbjct: 303 LLLKEIHLHADQLIADNYGNYVVQHVLEKGRPEQKSRIIGVIRGRVVSLSQHKFASNVVE 362
Query: 250 KCLKY--QNAVHYIIEELLNSDQ--ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
KC+ + ++ +I+EL ++ + IL + D++ NYV+Q L R + L+
Sbjct: 363 KCIVHASRHERAGLIDELCSAPEGAILTMTKDQFANYVVQKMLDIAEPSQR----KMLIY 418
Query: 306 KLQQHLAALRVMKYGSNVY-------KWTTASHPCLA 335
+L+ HL LR Y ++ K +T+ P L+
Sbjct: 419 RLRPHLPTLRKFTYAKHIVNKIERLSKGSTSGSPLLS 455
>gi|242020205|ref|XP_002430546.1| pumilio, putative [Pediculus humanus corporis]
gi|212515710|gb|EEB17808.1| pumilio, putative [Pediculus humanus corporis]
Length = 588
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 147/322 (45%), Gaps = 29/322 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + + LM+ +G +V KF E
Sbjct: 262 IVEFSQDQHGSRFIQQKLERATVNEKQMVFNEILPSAYNLMTDVFGNYVIQKFFEFGTPE 321
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q A IL + + LLA + +G ++K ++ + + L HV+ +K
Sbjct: 322 QKA--ILSQIVRGHVLLLA-LQMYGCRVIQKALESLTSEQQQEIVRELDGHVLKCVK--- 375
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E H FI A L+ H GC + +++ +
Sbjct: 376 -----DQNGNHVVQKCIERVDPHALQFIINALSGQVFALSTHPYGCRVIQRILEHCTPEQ 430
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + +A L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 431 VAPILEELHSHAEQLVQDQFGNYVIQHVLEHGKPEDKSKIINNVRGKVLALSQHKFASNV 490
Query: 248 VQKCLKYQNAVH--YIIEELLN-SDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQR- 302
V+KC+ + +IEE+ N +D LQ + D+Y NYV+Q + D QR
Sbjct: 491 VEKCVTHATRTERSVLIEEVCNYNDNALQLMMKDQYANYVVQKMI------DVCEPTQRK 544
Query: 303 -LVTKLQQHLAALRVMKYGSNV 323
L+ K++ H++ALR YG ++
Sbjct: 545 ILMHKIRGHISALRKYTYGKHI 566
>gi|347970897|ref|XP_003436658.1| AGAP003914-PB [Anopheles gambiae str. PEST]
gi|333469539|gb|EGK97332.1| AGAP003914-PB [Anopheles gambiae str. PEST]
Length = 1378
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 80/324 (24%), Positives = 146/324 (45%), Gaps = 26/324 (8%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L S +F + G + LM+ +G +V KF E
Sbjct: 935 TNH-IVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEF 993
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSAL 123
+ Q + ++ L ++ +G ++K ++ + + L HV+ +
Sbjct: 994 GSPEQKQALAQQVKGH---VLPLALQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCV 1050
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K + G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 1051 K--------DQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHC 1102
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ IL + N L + + GNYV+QHVL P A+ ++RG + LS K
Sbjct: 1103 TPEQTAPILAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKF 1162
Query: 244 GSFVVQKCLKYQNAVH--YIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
S VV+KC+ + +IEE+ N + + D+Y NYV+Q + + R
Sbjct: 1163 ASNVVEKCVTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQR--- 1219
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ K++ H+ +L+ YG ++
Sbjct: 1220 -KVLLHKIRPHMNSLKKYTYGKHI 1242
>gi|398015064|ref|XP_003860722.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
gi|322498944|emb|CBZ34017.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
Length = 554
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 9/279 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCN 71
++ A+DQ G +YLQ L + D+ L + + ELM+ QY F+ K + +
Sbjct: 202 VYETAKDQHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQKLFDIMPD 261
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ + + ++ + S+ G+ SV+K+I+ ++ + + AL + L+
Sbjct: 262 DVRYKVAVVAAPH----ICMISLTPHGTFSVQKMIETISTREEMKI-ICEALAKDVVRLV 316
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + L+ ++IY+A C+ +A ++QGC L +++ ++ +
Sbjct: 317 KDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAAL 376
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + +++ GNYV+Q+VL D + D I A H V LS+ K S V++K
Sbjct: 377 VDQVLACCLQIAQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLSMNKFSSNVMEKV 436
Query: 252 LKYQNAVHYI--IEELLNSDQILQVANDKYGNYVIQTAL 288
L+ + + +EE+ N + I + D YGNYV+QTAL
Sbjct: 437 LRGASRPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTAL 475
>gi|313471420|sp|Q9C8B8.2|PUM17_ARATH RecName: Full=Putative pumilio homolog 17; Short=APUM-17;
Short=AtPUM17
Length = 332
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 130/254 (51%), Gaps = 22/254 (8%)
Query: 82 ITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVIL 141
+T F++ + +K GS S++KL+++ + + A+ RLF +M+ K S V +
Sbjct: 80 LTSDSDYFMVITRNKNGSKSLQKLMRMSDDMDVFFF---VAIMRLFIHVMIDKYASYVAI 136
Query: 142 QCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQILHLISVNAA 200
Q + K + +Y L + L+LA + GCI LN I + R +++ ++S NA
Sbjct: 137 QGMRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNAL 196
Query: 201 SLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN-AVH 259
LS GN+VVQHVL L D I L G+ V+LS K GS++V++ L+ ++ +
Sbjct: 197 LLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMA 256
Query: 260 YIIEELL--NSDQILQVANDKYGNYV----------IQTA-----LAETMRQDRLSVHQR 302
I+ +LL ++ ++++A + GN+V I TA L +R R +H+
Sbjct: 257 TIVLDLLACKTEMLIRLARSENGNFVVCKLLELTNDILTADLFYSLVNKLRPYRFLLHRF 316
Query: 303 LVTKLQQHLAALRV 316
+K+ L ++RV
Sbjct: 317 PESKIVAILGSMRV 330
>gi|146086139|ref|XP_001465465.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
gi|134069563|emb|CAM67886.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
Length = 554
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 9/279 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCN 71
++ A+DQ G +YLQ L + D+ L + + ELM+ QY F+ K + +
Sbjct: 202 VYETAKDQHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQKLFDIMPD 261
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+++ + ++ + S+ G+ SV+K+I+ ++ + + AL + L+
Sbjct: 262 DARYKVAVVAAPH----ICMISLTPHGTFSVQKMIETISTREEMKI-ICEALAKDVVRLV 316
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + L+ ++IY+A C+ +A ++QGC L +++ ++ +
Sbjct: 317 KDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAAL 376
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + + + GNYV+Q+VL D + D I A H V LS+ K S V++K
Sbjct: 377 VDQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLSMNKFSSNVMEKV 436
Query: 252 LKYQNAVHYI--IEELLNSDQILQVANDKYGNYVIQTAL 288
L+ + + +EE+ N + I + D YGNYV+QTAL
Sbjct: 437 LRGASRPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTAL 475
>gi|407406573|gb|EKF30846.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi
marinkellei]
Length = 565
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++ +A+DQ G ++LQ L S+GD + + + ELM+ QY F+ K +
Sbjct: 200 VYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEIVPHVAELMTDQYANFLIQKLFDMMP 259
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ + + ++ + + ++ G+ SV+K+++ +A + + AL + L+
Sbjct: 260 QD-VRYKVARVAAPKIISI--ALTPHGTFSVQKMVETIASREEMDI-LREALSKDVVRLV 315
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + L+ + +FIY A C+ +A ++QGC L ++ S+R +
Sbjct: 316 KDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASSSQRATL 375
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
++ I ++ GNYV+Q+VL D D I A H V L + K S V++K
Sbjct: 376 VNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKV 435
Query: 252 LK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
L+ Q +E + + D + ++ D +GNYV+QTAL
Sbjct: 436 LRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTAL 474
>gi|15236527|ref|NP_192596.1| pumilio 15 [Arabidopsis thaliana]
gi|75100238|sp|O81465.1|PUM15_ARATH RecName: Full=Pumilio homolog 15; Short=APUM-15; Short=AtPUM15
gi|3377818|gb|AAC28191.1| contains similarity to drosophila pumilio protein (GB:S22026)
[Arabidopsis thaliana]
gi|7267498|emb|CAB77981.1| putative self-incompatability RNA-binding protein [Arabidopsis
thaliana]
gi|332657258|gb|AEE82658.1| pumilio 15 [Arabidopsis thaliana]
Length = 477
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 18/296 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
L S A+D S LQ ++ G +DK+F + ELM YG VF K +E C +
Sbjct: 155 LLSRAKDGIESHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDE 214
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q+ ++ + + F+ V G+ +++ L++ + + M L + L++T
Sbjct: 215 QITRVLDIVLEEPFEFVRLCVHTHGTHAIQGLMRSLCS-EEQISRFMETL--CYVSLLLT 271
Query: 134 KP--GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
K VIL C ++ + +++C +A + GC L I R +
Sbjct: 272 KDVIAHRVILFCFNQFSPSHTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPL 331
Query: 192 LHLISVNAASLSRHRSG----------NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ I A L + G NYVVQ++L L+D + A+ L G+YV LS
Sbjct: 332 IKEIISIAVRLCGNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYD 391
Query: 242 KCGSFVVQKCLKYQN-AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDR 296
K GS VVQKCL+ + + II ELL+ L V D YG+YVIQTA + +D+
Sbjct: 392 KYGSHVVQKCLESREFSSRRIIAELLSDIDSLLV--DPYGDYVIQTAWIVSEVRDK 445
>gi|384490402|gb|EIE81624.1| hypothetical protein RO3G_06329 [Rhizopus delemar RA 99-880]
Length = 492
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 6/186 (3%)
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +CL FIY A E+C+ +A H GC L ID ++ KQ++ I
Sbjct: 305 GNHVIQKCLHRFTTKHKQFIYDAVSENCIEVATHRHGCCVLQRCIDYSANNQTKQLVDEI 364
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY- 254
+A +L + GNYVVQ+VL L D + + G+ LS K S V++KC++
Sbjct: 365 INHALTLVQDPYGNYVVQYVLELGDAQFSNRLIRQFIGNLSKLSTQKYSSNVMEKCIRVA 424
Query: 255 -QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAA 313
++ H +++E++N D++ ++ D Y NYV+QTAL S H++L ++ L
Sbjct: 425 EEDTRHDLVQEMMNKDRLEKLLKDSYANYVVQTALDYASE----SQHRQLAEYIRPLLPT 480
Query: 314 LRVMKY 319
+R Y
Sbjct: 481 IRNTSY 486
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 16/123 (13%)
Query: 207 SGNYVVQHVL----SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHY 260
+GN+V+Q L + F+ DA+ + ++++ + G V+Q+C+ Y N
Sbjct: 304 NGNHVIQKCLHRFTTKHKQFIYDAVS----ENCIEVATHRHGCCVLQRCIDYSANNQTKQ 359
Query: 261 IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 320
+++E++N L + D YGNYV+Q L Q RL+ + +L+ L KY
Sbjct: 360 LVDEIIN--HALTLVQDPYGNYVVQYVLELGDAQ----FSNRLIRQFIGNLSKLSTQKYS 413
Query: 321 SNV 323
SNV
Sbjct: 414 SNV 416
>gi|444318131|ref|XP_004179723.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
gi|387512764|emb|CCH60204.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
Length = 870
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 35/296 (11%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+++S+ DQ G ++LQ+ L D +F T ELM+ +G ++ K +E
Sbjct: 549 NIYSICTDQYGCRFLQKQLDVLGKEAADIIFNETKDHTVELMTDSFGNYLIQKLLERITL 608
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIK----------VVAHLPPLLYHVMSA 122
Q +II I+ F+ +++ G+ +++KL++ +V L P
Sbjct: 609 EQ-RIIIANIS--SPHFVEIALNPHGTRALQKLVECTETDEESNIIVKSLTP-------- 657
Query: 123 LKRLFKFLMMTKP--GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
LM++K G+ V+ +CL+ FI+ AA + + +A H GC L +
Sbjct: 658 -----SILMLSKDLNGNHVVQKCLQKMPPKHFQFIFDAACKDFIEIATHRHGCCVLQRCL 712
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE-DPFLID---AICFALRGHYV 236
D+ +R + + + N L+ GNYVVQ+V++ E D D I L+ +
Sbjct: 713 DHGTEEQRHSLCNKLLENIDMLTMDPFGNYVVQYVITKESDDNKYDFTYKIVHLLKPKVI 772
Query: 237 DLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSD---QILQVANDKYGNYVIQTALA 289
LSL K GS VV+K L+ +I ELLN + +I + ND YGNYV+QTALA
Sbjct: 773 VLSLHKFGSNVVEKLLRTPIVSETVILELLNKESNQEIQTLLNDSYGNYVLQTALA 828
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 12/128 (9%)
Query: 202 LSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--Q 255
LS+ +GN+VVQ L P F+ DA C +++++ + G V+Q+CL + +
Sbjct: 662 LSKDLNGNHVVQKCLQKMPPKHFQFIFDAAC----KDFIEIATHRHGCCVLQRCLDHGTE 717
Query: 256 NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALR 315
H + +LL + +L + D +GNYV+Q + + ++ ++V L+ + L
Sbjct: 718 EQRHSLCNKLLENIDMLTM--DPFGNYVVQYVITKESDDNKYDFTYKIVHLLKPKVIVLS 775
Query: 316 VMKYGSNV 323
+ K+GSNV
Sbjct: 776 LHKFGSNV 783
>gi|157869162|ref|XP_001683133.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
gi|68224016|emb|CAJ05068.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
Length = 569
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 7/279 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ A+DQ G +YLQ L + D L + + ELM+ QY F+ K + +
Sbjct: 202 VYETAKDQHGCRYLQRWLDTNCDPEALQVMMNEIIPHVGELMTDQYANFLIQKLFDIMPD 261
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ + Q + S+ G+ SV+K+I+ ++ + + AL + L+
Sbjct: 262 DVRYKVAIVAAPQ---ICMISLTPHGTFSVQKMIETISTREEMEI-ISEALCKDVVRLVK 317
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI + L+ ++IY+A C+ +A ++QGC L +++ ++ ++
Sbjct: 318 DAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAALV 377
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + + GNYV+Q+VL D + D I A H V LS+ K S V++K L
Sbjct: 378 DQVLACCLQIVQDPFGNYVLQYVLEEHDSKINDTIALAFLPHLVQLSMNKFSSNVMEKVL 437
Query: 253 KYQNAVHYI--IEELLNSDQILQVANDKYGNYVIQTALA 289
+ + + +EE+ N + I + D YGNYV+QTAL
Sbjct: 438 RGASGPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTALT 476
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 158 AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNAASLSRHRSGNYVVQHVL 216
AA + C+ ++ G ++ I+ + +I+ + + L + GN+V+Q VL
Sbjct: 271 AAPQICM-ISLTPHGTFSVQKMIETISTREEMEIISEALCKDVVRLVKDAHGNHVIQKVL 329
Query: 217 SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQV 274
D + I A+ V ++ K G V+Q+CL++ + +++++L LQ+
Sbjct: 330 QRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAALVDQVLAC--CLQI 387
Query: 275 ANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D +GNYV+Q L E + ++ + HL L + K+ SNV
Sbjct: 388 VQDPFGNYVLQYVLEEHDSK----INDTIALAFLPHLVQLSMNKFSSNV 432
>gi|256090643|ref|XP_002581293.1| pumilio [Schistosoma mansoni]
gi|353230662|emb|CCD77079.1| putative pumilio [Schistosoma mansoni]
Length = 1534
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 86/330 (26%), Positives = 155/330 (46%), Gaps = 30/330 (9%)
Query: 10 TNHDLFS----LAQDQEGSQYLQENLSSGDSRILDK--LFWVVSGFTFELMSGQYGRFVF 63
T HDL + AQDQ GS+++Q+ L + ++DK +F + + LM +G +V
Sbjct: 961 TLHDLMNHIVEFAQDQYGSRFIQQKLEQ--ASVVDKTSVFREILPHAYNLMIDVFGNYVI 1018
Query: 64 GKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSAL 123
KF E Q ++ +I Q L S+ +G ++K ++ V PL + S +
Sbjct: 1019 QKFFELGTPEQKQILAQRIRGQ---VLSLSLQMYGCRVIQKAVESV----PLEMQI-SIV 1070
Query: 124 KRLFKFLMMT---KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
K L ++ + G+ V+ +C+E FI A +H ++ H GC + +
Sbjct: 1071 KELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRIL 1130
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
++ + IL + + +L + + GNYV+QHVL I ++G LS+
Sbjct: 1131 EHCTPEQTTPILSELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSV 1190
Query: 241 TKCGSFVVQKC------LKYQNAVHYIIEELLNSDQIL-QVANDKYGNYVIQTALAETMR 293
K S VV+K ++ Q+ ++ I+EE + +L + D++ NYVIQ L +
Sbjct: 1191 HKFASNVVEKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKML-DVAE 1249
Query: 294 QDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
Q + + L+ +++ HL LR YG ++
Sbjct: 1250 Q---PIRKELMIQIRPHLGILRKYTYGKHI 1276
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 8/203 (3%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM+ G+ VI + E + + Q L L+ GC + ++++ +
Sbjct: 1008 LMIDVFGNYVIQKFFELGTPEQKQILAQRIRGQVLSLSLQMYGCRVIQKAVESVPLEMQI 1067
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ + + ++GN+VVQ + P + I A + H +S G V+Q
Sbjct: 1068 SIVKELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQ 1127
Query: 250 KCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+ L++ I+ EL L D+YGNYVIQ L +D+ R+V +
Sbjct: 1128 RILEHCTPEQTTPILSELHQHTDAL--VKDQYGNYVIQHVLEHGKTEDK----SRIVEHI 1181
Query: 308 QQHLAALRVMKYGSNVYKWTTAS 330
+ +A L V K+ SNV + A+
Sbjct: 1182 KGRVAKLSVHKFASNVVEKAVAN 1204
>gi|256090645|ref|XP_002581294.1| pumilio [Schistosoma mansoni]
gi|353230661|emb|CCD77078.1| putative pumilio [Schistosoma mansoni]
Length = 1537
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 86/330 (26%), Positives = 155/330 (46%), Gaps = 30/330 (9%)
Query: 10 TNHDLFS----LAQDQEGSQYLQENLSSGDSRILDK--LFWVVSGFTFELMSGQYGRFVF 63
T HDL + AQDQ GS+++Q+ L + ++DK +F + + LM +G +V
Sbjct: 964 TLHDLMNHIVEFAQDQYGSRFIQQKLEQ--ASVVDKTSVFREILPHAYNLMIDVFGNYVI 1021
Query: 64 GKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSAL 123
KF E Q ++ +I Q L S+ +G ++K ++ V PL + S +
Sbjct: 1022 QKFFELGTPEQKQILAQRIRGQ---VLSLSLQMYGCRVIQKAVESV----PLEMQI-SIV 1073
Query: 124 KRLFKFLMMT---KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
K L ++ + G+ V+ +C+E FI A +H ++ H GC + +
Sbjct: 1074 KELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRIL 1133
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
++ + IL + + +L + + GNYV+QHVL I ++G LS+
Sbjct: 1134 EHCTPEQTTPILSELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSV 1193
Query: 241 TKCGSFVVQKC------LKYQNAVHYIIEELLNSDQIL-QVANDKYGNYVIQTALAETMR 293
K S VV+K ++ Q+ ++ I+EE + +L + D++ NYVIQ L +
Sbjct: 1194 HKFASNVVEKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKML-DVAE 1252
Query: 294 QDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
Q + + L+ +++ HL LR YG ++
Sbjct: 1253 Q---PIRKELMIQIRPHLGILRKYTYGKHI 1279
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 8/203 (3%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM+ G+ VI + E + + Q L L+ GC + ++++ +
Sbjct: 1011 LMIDVFGNYVIQKFFELGTPEQKQILAQRIRGQVLSLSLQMYGCRVIQKAVESVPLEMQI 1070
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ + + ++GN+VVQ + P + I A + H +S G V+Q
Sbjct: 1071 SIVKELDGCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQ 1130
Query: 250 KCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+ L++ I+ EL L D+YGNYVIQ L +D+ R+V +
Sbjct: 1131 RILEHCTPEQTTPILSELHQHTDAL--VKDQYGNYVIQHVLEHGKTEDK----SRIVEHI 1184
Query: 308 QQHLAALRVMKYGSNVYKWTTAS 330
+ +A L V K+ SNV + A+
Sbjct: 1185 KGRVAKLSVHKFASNVVEKAVAN 1207
>gi|35186940|gb|AAQ84132.1| pumilio protein 3 [Trypanosoma cruzi]
Length = 561
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++ +A+DQ G ++LQ L S+GD + + V ELM+ QY F+ K +
Sbjct: 200 VYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLFDMMP 259
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ + + ++ + + ++ G+ SV+K+++ +A + + AL + L+
Sbjct: 260 QD-VRYKVARVAAPKIISI--ALTPHGTFSVQKMVETIASREEMDI-LREALSKDVVRLV 315
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + L+ + +FIY A C+ +A ++QGC L ++ S+R +
Sbjct: 316 KDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATL 375
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
++ I ++ GNYV+Q+VL D D I A H V L + K S V++K
Sbjct: 376 VNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKV 435
Query: 252 LK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
L+ Q +E + + D + ++ D +GNYV+QTAL
Sbjct: 436 LRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTAL 474
>gi|320581830|gb|EFW96049.1| Member of the PUF protein family [Ogataea parapolymorpha DL-1]
Length = 548
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 150/321 (46%), Gaps = 24/321 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+ +L++DQ G ++LQ+ + + +F V + ELM +G ++ K I + +
Sbjct: 205 DILALSKDQFGCRFLQKKIDEDFGKNYPLIFKEVHQHSIELMMDPFGNYLIQKIILNASA 264
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP-------LLYHVMSALKR 125
+L LI+ I L ++ G+ + +KLI ++ L HV++ ++
Sbjct: 265 EELKLILTNIA---PLIHTICRNQHGTRACQKLIDCLSTTGHYRLLQNCLTPHVVNLIQD 321
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L G+ V+ +C+ N FI + + + ++ H+ GC L ++
Sbjct: 322 LN--------GNHVVQKCIAKFQNDDLQFIIDSICNNIVKISTHKHGCCVLQKLLNRCNH 373
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ Q+ I N+ L + + GNYVVQ ++SL+ P L + + DLS K S
Sbjct: 374 QQVLQLGSEIVANSYQLMQDQFGNYVVQFLISLDIPSLNSELVKIMVPFINDLSTQKFSS 433
Query: 246 FVVQKCL--KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
VV+KCL K+ + +++ LL + + D++GNYV+QTA+ + ++L R
Sbjct: 434 NVVEKCLKIKFDQGFNPLVDALLQPQVLGVLVKDQFGNYVVQTAMDNSSPDNKL----RF 489
Query: 304 VTKLQQHLAALRVMKYGSNVY 324
++ L +R +G ++
Sbjct: 490 ALAIKPMLPMVRHASFGKRIH 510
>gi|390179097|ref|XP_003736803.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859711|gb|EIM52876.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1192
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 766 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 824
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ L ++ +G ++K ++ ++ P ++ L
Sbjct: 825 TPEQKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 879
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 880 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 939
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + N L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 940 ILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 995
Query: 247 VVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 996 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 1051
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+ ALR YG ++
Sbjct: 1052 LMTKIRPHMTALRKYTYGKHI 1072
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
L H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 765 LNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 824
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
P + + ++GH + L+L G V+QK L+ I+ EL +L+ D
Sbjct: 825 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 882
Query: 278 KYGNYVIQTAL 288
+ GN+V+Q +
Sbjct: 883 QNGNHVVQKCI 893
>gi|390179095|ref|XP_003736802.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|388859710|gb|EIM52875.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1531
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 1105 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 1163
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ L ++ +G ++K ++ ++ P ++ L
Sbjct: 1164 TPEQKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 1218
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 1219 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 1278
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + N L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 1279 ILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 1334
Query: 247 VVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 1335 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 1390
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+ ALR YG ++
Sbjct: 1391 LMTKIRPHMTALRKYTYGKHI 1411
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
L H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 1104 LNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 1163
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
P + + ++GH + L+L G V+QK L+ I+ EL +L+ D
Sbjct: 1164 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 1221
Query: 278 KYGNYVIQTAL 288
+ GN+V+Q +
Sbjct: 1222 QNGNHVVQKCI 1232
>gi|357135024|ref|XP_003569112.1| PREDICTED: pumilio homolog 1-like, partial [Brachypodium
distachyon]
Length = 639
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 308 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTT 367
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
Q+ DQL L S+ +G ++K I+VV + L H+M ++
Sbjct: 368 QIK------ELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMVAELDGHIMRCVR 421
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E FI + L+ H GC + +++
Sbjct: 422 --------DQNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCD 473
Query: 185 GSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K
Sbjct: 474 DPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQMSQQKF 533
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + N V +I E+L S + L+V D++ NYV+Q L Q R
Sbjct: 534 ASNVIEKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYVVQKVLETCDDQQR- 592
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 593 ---EMILTRIKAHLNTLKKYTYGKHI 615
>gi|224097831|ref|XP_002311080.1| predicted protein [Populus trichocarpa]
gi|222850900|gb|EEE88447.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 154/317 (48%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +K+F + LM+ +G +V KF++ ES
Sbjct: 676 VVEFSTDQYGSRFIQQKLETASVEETNKIFPEIIPHALTLMTDVFGNYVIQKFLDQGTES 735
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + ++T L S+ +G ++K ++V+ +++ L +
Sbjct: 736 QRIELASQLTGH---VLPLSLQMYGCRVIQKALEVID--VDRQTQMVAELDGSVMKCIRD 790
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E + FI A + L+ H GC + +++ K +Q I+
Sbjct: 791 QNGNHVIQKCIECVPGDRIQFITSAFYGQVVALSTHPYGCRVIQRVLEHCKDMNTQQVIM 850
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + +L++ + GNYV+QHVL P I L G V +S K S VV+KCL
Sbjct: 851 DEIMQSVCALAQDQYGNYVIQHVLEHGKPQQRSVIIRKLAGQIVLMSQQKFASNVVEKCL 910
Query: 253 KY--QNAVHYIIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ + ++ E+L S ++ LQ + D +GNYV+Q L ET L + ++++
Sbjct: 911 TFGGPDERQLLVNEMLGSTDENEPLQAMMKDPFGNYVVQKVL-ETCDDRSLEL---ILSR 966
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL+AL+ YG ++
Sbjct: 967 IRIHLSALKRYTYGKHI 983
>gi|401421895|ref|XP_003875436.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491673|emb|CBZ26946.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 568
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 7/279 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ A+DQ G +YLQ L + D L + + ELM+ QY F+ K + +
Sbjct: 202 VYETAKDQHGCRYLQRWLDTNCDPETLQVMMDEIIPHVGELMTDQYANFLIQKLFDIMPD 261
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ + Q + S+ G+ SV+K+I+ ++ + AL + L+
Sbjct: 262 DVRYKVAIVAAPQ---ICMISLTPHGTFSVQKMIETISTREETEI-ICEALAKDVVRLVK 317
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI + L+ ++IY+A C+ +A ++QGC L +++ ++ ++
Sbjct: 318 DAHGNHVIQKVLQRFDFDDKEYIYRAVSTDCVSIAKNKQGCCVLQRSLEHASPRQKAALV 377
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + + GNYV+Q+VL D + D I FA H V LS+ K S V++K L
Sbjct: 378 DQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIAFAFLPHLVHLSMNKFSSNVMEKVL 437
Query: 253 KYQNAVHYI--IEELLNSDQILQVANDKYGNYVIQTALA 289
+ + + +EE+ N I + D YGNYV+QTAL
Sbjct: 438 RGASRPVQVMYMEEMCNPGIISHLIQDDYGNYVLQTALT 476
>gi|390336472|ref|XP_794621.3| PREDICTED: pumilio homolog 1 [Strongylocentrotus purpuratus]
Length = 1183
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 80/323 (24%), Positives = 145/323 (44%), Gaps = 31/323 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + G + LM+ +G +V KF E
Sbjct: 854 IVEFSQDQHGSRFIQQKLERATPTERQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGLPE 913
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLY---------HVMSALK 124
Q + +I + + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 914 QKQALAQRI--RGHVLPLA-LQMYGCRVIQKALESI---PPELQTEMVKELDGHVLKCVK 967
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 968 --------DQNGNHVVQKCIECVEPAALQFIVDAFRGQVYSLSTHPYGCRVIQRILEHCI 1019
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+ K +L + SL + + GNYV+QHVL P I +RG + LS K
Sbjct: 1020 VEQTKPLLDELHQQTESLVQDQYGNYVIQHVLEHGRPEDKSKIVLEMRGKVLVLSQHKFA 1079
Query: 245 SFVVQKCLKYQNAVH--YIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVH 300
S VV+KC+ + + +I+E+ N + + D+Y NYV+Q + + R
Sbjct: 1080 SNVVEKCITHSSRPERALLIDEVCSYNDGALYTMMKDQYANYVVQKMIDVSEPNQR---- 1135
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ L+ K++ ++A+LR YG ++
Sbjct: 1136 KILMHKIRPYVASLRKYTYGKHI 1158
Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
R ++ + PG S +L+ + N + + + H + + + G + ++
Sbjct: 818 RSTAYMEKSAPGRSRLLE--DFRNNRFPNLQLRDLVSHIVEFSQDQHGSRFIQQKLERAT 875
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+ R+ + I A SL GNYV+Q P A+ +RGH + L+L G
Sbjct: 876 PTERQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGLPEQKQALAQRIRGHVLPLALQMYG 935
Query: 245 SFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
V+QK L+ +++EL +L+ D+ GN+V+Q + E + L Q
Sbjct: 936 CRVIQKALESIPPELQTEMVKEL--DGHVLKCVKDQNGNHVVQKCI-ECVEPAAL---QF 989
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
+V + + +L YG V
Sbjct: 990 IVDAFRGQVYSLSTHPYGCRV 1010
>gi|302759032|ref|XP_002962939.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
gi|300169800|gb|EFJ36402.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
Length = 337
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 26/322 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F V F LM+ +G +V KF E N
Sbjct: 24 VVEFSADQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQ 83
Query: 74 Q---LALIILKITFQDQLFLLASVDKFGSSSVKKLIKV--VAHLPPLLYHVMSALKRLFK 128
Q LA +++ L S+ +G ++K ++V V L+ + + R +
Sbjct: 84 QRRELANLLVG------HMLELSLQMYGCRVIQKALEVCDVDQQTQLVVELDGHVMRCVR 137
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ VI +C+E K FI A L L+ H GC + +++ ++
Sbjct: 138 ----DQNGNHVIQKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQK 193
Query: 189 KQ-ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+ I+ I SL++ + GNYV+QHVL P I L G V +S K S V
Sbjct: 194 QAGIMEEILGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNV 253
Query: 248 VQKCLKYQNAV--HYIIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
V+KCL++ +++E+L + + + D++ NYV+Q L Q R +
Sbjct: 254 VEKCLEFGGPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVLETCSDQQR----E 309
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
L+ +++ HL AL+ YG ++
Sbjct: 310 MLLGRIKVHLHALKKYTYGKHI 331
>gi|380029756|ref|XP_003698531.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Apis florea]
Length = 1240
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 18/319 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 880 NH-IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFG 938
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + + K+ + + LA + +G ++K ++ + P ++ L
Sbjct: 939 TPEQKSTLAQKV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKC 993
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E F+ A L+ H GC + +++ + +
Sbjct: 994 VKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQG 1053
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + L + + GNYV+QHVL P + ++RG + LS K S VV+K
Sbjct: 1054 ILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEK 1113
Query: 251 CLKY----QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
C+ + + AV +IEE+ N + + + D+Y NYV+Q + R + L+
Sbjct: 1114 CVTHATRQERAV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQR----KVLM 1167
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ HL +LR YG ++
Sbjct: 1168 HKIRPHLGSLRKYTYGKHI 1186
>gi|350400877|ref|XP_003485990.1| PREDICTED: pumilio homolog 1-like [Bombus impatiens]
Length = 1240
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 18/319 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 880 NH-IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFG 938
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + + K+ + + LA + +G ++K ++ + P ++ L
Sbjct: 939 TPEQKSTLAQKV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKC 993
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E F+ A L+ H GC + +++ + +
Sbjct: 994 VKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQG 1053
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + L + + GNYV+QHVL P + ++RG + LS K S VV+K
Sbjct: 1054 ILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEK 1113
Query: 251 CLKY----QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
C+ + + AV +IEE+ N + + + D+Y NYV+Q + R + L+
Sbjct: 1114 CVTHATRQERAV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQR----KVLM 1167
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ HL +LR YG ++
Sbjct: 1168 HKIRPHLGSLRKYTYGKHI 1186
>gi|340719709|ref|XP_003398290.1| PREDICTED: pumilio homolog 1-like [Bombus terrestris]
Length = 1239
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 18/319 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 879 NH-IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFG 937
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + + K+ + + LA + +G ++K ++ + P ++ L
Sbjct: 938 TPEQKSTLAQKV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKC 992
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E F+ A L+ H GC + +++ + +
Sbjct: 993 VKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQG 1052
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + L + + GNYV+QHVL P + ++RG + LS K S VV+K
Sbjct: 1053 ILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEK 1112
Query: 251 CLKY----QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
C+ + + AV +IEE+ N + + + D+Y NYV+Q + R + L+
Sbjct: 1113 CVTHATRQERAV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQR----KVLM 1166
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ HL +LR YG ++
Sbjct: 1167 HKIRPHLGSLRKYTYGKHI 1185
>gi|328786740|ref|XP_391849.4| PREDICTED: pumilio homolog 2 [Apis mellifera]
Length = 1240
Score = 92.0 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 18/319 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 880 NH-IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFG 938
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + + K+ + + LA + +G ++K ++ + P ++ L
Sbjct: 939 TPEQKSTLAQKV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKC 993
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E F+ A L+ H GC + +++ + +
Sbjct: 994 VKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQG 1053
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + L + + GNYV+QHVL P + ++RG + LS K S VV+K
Sbjct: 1054 ILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEK 1113
Query: 251 CLKY----QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
C+ + + AV +IEE+ N + + + D+Y NYV+Q + R + L+
Sbjct: 1114 CVTHATRQERAV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQR----KVLM 1167
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ HL +LR YG ++
Sbjct: 1168 HKIRPHLGSLRKYTYGKHI 1186
>gi|302757830|ref|XP_002962338.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
gi|300169199|gb|EFJ35801.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
Length = 353
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 146/316 (46%), Gaps = 26/316 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ---LA 76
DQ GS+++Q+ L + + +F V F LM+ +G +V KF E N Q LA
Sbjct: 1 DQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQQRRELA 60
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKV--VAHLPPLLYHVMSALKRLFKFLMMTK 134
+++ L S+ +G ++K ++V V L+ + + R + +
Sbjct: 61 NLLVG------HMLELSLQMYGCRVIQKALEVCDVDQQTQLVVELDGHVMRCVR----DQ 110
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILH 193
G+ VI +C+E K FI A L L+ H GC + +++ +++ I+
Sbjct: 111 NGNHVIQKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAGIME 170
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I SL++ + GNYV+QHVL P I L G V +S K S VV+KCL+
Sbjct: 171 EILGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEKCLE 230
Query: 254 YQNAV--HYIIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+ +++E+L + + + D++ NYV+Q L Q R + L+ ++
Sbjct: 231 FGGPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVLETCSDQQR----EMLLGRI 286
Query: 308 QQHLAALRVMKYGSNV 323
+ HL AL+ YG ++
Sbjct: 287 KVHLHALKKYTYGKHI 302
>gi|224100489|ref|XP_002311896.1| predicted protein [Populus trichocarpa]
gi|222851716|gb|EEE89263.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 150/317 (47%), Gaps = 28/317 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + + +F V +LM+ +G +V KF E + Q +
Sbjct: 21 DQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQRMELA 80
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLL-YHVMSALKRLFKFLMMT 133
K++ Q L S+ +G ++K ++V+ A L L HVM +
Sbjct: 81 EKLSGQ---ILQLSLQMYGCRVIQKALEVIELDQKAKLAQELDGHVMRCVH--------D 129
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E +FI A + L+ H GC + +++ + Q I+
Sbjct: 130 QNGNHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIV 189
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I ++ L++ + GNYV QHVL P I L G V +S K S VV+KCL
Sbjct: 190 DEILESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKCL 249
Query: 253 KYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
K+ +A + II + +D +L + D++ NYV+Q L ET + + L+++
Sbjct: 250 KHADAAERELMIGEIIGQSEENDNLLIMMKDQFANYVVQKIL-ETSNDKQKEI---LLSR 305
Query: 307 LQQHLAALRVMKYGSNV 323
+ HL AL+ YG ++
Sbjct: 306 INAHLNALKKYTYGKHI 322
>gi|18416639|ref|NP_567733.1| pumilio 6 protein [Arabidopsis thaliana]
gi|75168940|sp|Q9C5E7.1|PUM6_ARATH RecName: Full=Pumilio homolog 6, chloroplastic; Short=APUM-6;
Short=AtPUM6; Flags: Precursor
gi|13430772|gb|AAK26008.1|AF360298_1 putative pumilio protein [Arabidopsis thaliana]
gi|22136912|gb|AAM91800.1| putative pumilio protein [Arabidopsis thaliana]
gi|227206416|dbj|BAH57263.1| AT4G25880 [Arabidopsis thaliana]
gi|332659727|gb|AEE85127.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 861
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 147/325 (45%), Gaps = 25/325 (7%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
T H + + DQ GS+++Q+ L + +F + +LM+ +G +V KF E
Sbjct: 534 TGH-IVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEY 592
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
N +Q + ++ Q + S+ +G ++K + V+ P + L
Sbjct: 593 GNSTQRKELADQLMGQ---IVPLSLQMYGCRVIQKALDVIE--PDQRVRLARELDGQVMR 647
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR- 188
+ + G+ VI +C+E K F+ A L+ H GC + ++ +
Sbjct: 648 CVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQC 707
Query: 189 ----KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
++IL + V LS+ + GNYV QHVL + I L GH V LSL K
Sbjct: 708 RFITEEILESVCV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFA 763
Query: 245 SFVVQKCLKYQNAVHY--IIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLS 298
S V++KCL+Y V II+E+ D+ +L + D+YGNYV+Q RL+
Sbjct: 764 SNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT 823
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
L ++++ H +AL+ YG ++
Sbjct: 824 ----LFSRVRMHASALKKYTYGKHI 844
>gi|354543476|emb|CCE40195.1| hypothetical protein CPAR2_102330 [Candida parapsilosis]
Length = 860
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 137/324 (42%), Gaps = 53/324 (16%)
Query: 14 LFSLAQDQEGSQYLQENL-----------------SSGDSRILDK-----LFWVVSGFTF 51
+ L DQ G ++LQ L S GD I D+ +F +
Sbjct: 505 ILDLCSDQHGCRFLQRELAKEQDCLLKRDDNKSDGSKGDGEIKDESVSTMIFNELHDEVV 564
Query: 52 ELMSGQYGRFVFGKFIES-CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 110
LM +G ++ K +E NE +L LI + F ++D G+ +++KLI+ V
Sbjct: 565 NLMLDPFGNYLIQKLVECVSNEQRLELI----KYSSSQFNRIALDSHGTRALQKLIECVG 620
Query: 111 HLPPLLYHVMSALKRLFKFLMMTKP----------GSSVILQCLEPSYNHKNDFIYQAAL 160
V+ + +P G+ V+ +CL N N IY
Sbjct: 621 ASHDNQEEVVDENDSASLIIKSLEPSIVLLSRDLNGNHVVQKCLINLSNKVNQVIYDTIT 680
Query: 161 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLED 220
+C +ACH GC + +D + + + H ++ + GNYVVQ+VLS D
Sbjct: 681 SNCEVVACHRHGCCVIQRCLDYGNDRQVETLSHEVTTKLGVFTTDPYGNYVVQYVLSHGD 740
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCL------KYQNAVH--------YIIEEL- 265
ID I LR H+ LS+ K GS V++K L K +N +I+EL
Sbjct: 741 SQSIDTIFAYLRDHFYQLSIHKFGSNVLEKSLRLEQKGKKENEEENNSSTRSASLIDELL 800
Query: 266 -LNSDQILQVANDKYGNYVIQTAL 288
L+SDQ V ND +GNYV+QT L
Sbjct: 801 KLSSDQFSTVLNDSFGNYVLQTCL 824
>gi|227204207|dbj|BAH56955.1| AT4G25880 [Arabidopsis thaliana]
Length = 806
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 30/327 (9%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
T H + + DQ GS+++Q+ L + +F + +LM+ +G +V KF E
Sbjct: 477 TGH-IVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEY 535
Query: 70 CNESQLALIILKITFQDQLF--LLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
N +Q + DQL ++ + +G ++K + V+ P + L
Sbjct: 536 GNSTQ------RKELADQLMGQIVPLLQMYGCRVIQKALDVIE--PDQRVRLARELDGQV 587
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI +C+E K F+ A L+ H GC + ++
Sbjct: 588 MRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDH 647
Query: 188 R-----KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
+ ++IL + V LS+ + GNYV QHVL + I L GH V LSL K
Sbjct: 648 QCRFITEEILESVCV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHK 703
Query: 243 CGSFVVQKCLKYQNAVHY--IIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDR 296
S V++KCL+Y V II+E+ D+ +L + D+YGNYV+Q R
Sbjct: 704 FASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQR 763
Query: 297 LSVHQRLVTKLQQHLAALRVMKYGSNV 323
L+ L ++++ H +AL+ YG ++
Sbjct: 764 LT----LFSRVRMHASALKKYTYGKHI 786
>gi|300120006|emb|CBK19560.2| unnamed protein product [Blastocystis hominis]
Length = 328
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 18/276 (6%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
LA DQEG+ ++D L+ + LM+ Q+G ++F K +E ++ Q
Sbjct: 14 LQLALDQEGTS------------LVDVLYEEMGERIGLLMTNQFGNYLFQKILEMSSDQQ 61
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK 134
+++ + Q AS D G+ V+KLI + LP ++ ++ L L
Sbjct: 62 RRQLLVMVQSQ---LREASKDVHGTRCVQKLIHL-CRLPDMVNRILDGLCPFVVELCADV 117
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 194
G+ VI CL+ + ++HC+ ++ GC + I+ G ++
Sbjct: 118 NGNHVIKCCLKSMAAELRQRLLDEVVDHCIEISKEMYGCSIIQKCIEIASGESADRLFDT 177
Query: 195 ISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY 254
I +A L R R NYV+Q+++ P C + H +LS KC S VV+K L
Sbjct: 178 IEAHALDLMRDRYANYVIQYLIENARPSESLRFCRCVLTHVEELSKEKCSSNVVEKSLNR 237
Query: 255 QNAV--HYIIEELLNSDQILQVANDKYGNYVIQTAL 288
+ II E++N+ + + D Y NYVIQ AL
Sbjct: 238 GDEATRDSIINEIVNASDLRSMLLDPYANYVIQKAL 273
>gi|357445829|ref|XP_003593192.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482240|gb|AES63443.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 198
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 154 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 213
FI+ AA HC+ +A H+ GC L I G R++++ IS NA L++ + GNYVVQ
Sbjct: 23 FIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQRLVAEISANALLLAQDKYGNYVVQ 82
Query: 214 HVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQI 271
+VL P + G+YV +S+ K S VV+KCL N + II ELL+
Sbjct: 83 YVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVEKCLVVFNDENRAKIIHELLSDPHF 142
Query: 272 LQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVY 324
+ D + NYVIQ AL R V+ LV K++ + A R Y ++
Sbjct: 143 DLLLQDPHANYVIQKAL----RHSEGHVYNLLVEKIESYKAICRNSPYSKKIF 191
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 224 IDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQVANDKYGN 281
I I A H +D++ + G V+ KC++Y + H ++ E+ S L +A DKYGN
Sbjct: 21 IKFIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQRLVAEI--SANALLLAQDKYGN 78
Query: 282 YVIQTAL 288
YV+Q L
Sbjct: 79 YVVQYVL 85
>gi|293331587|ref|NP_001169459.1| uncharacterized protein LOC100383330 [Zea mays]
gi|224029501|gb|ACN33826.1| unknown [Zea mays]
Length = 453
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 147/315 (46%), Gaps = 19/315 (6%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
++ DQ GS+++Q+ L +K+F + L + +G +V KF E E QL
Sbjct: 114 EISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQL 173
Query: 76 ALIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
I DQL L S+ +G V+K+++VV + ++ L+ +
Sbjct: 174 ------IQLADQLKGHILELSLQMYGCRVVQKVLEVVDKDRKI--DIVHELRNHILKCIG 225
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQI 191
+ G+ VI +C+E + F+ L L L H+ GC + +++ +
Sbjct: 226 DQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSAT 285
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
++ I L+ + GNYVVQHVL P AI L G V LS K S V++KC
Sbjct: 286 MNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKC 345
Query: 252 LKYQNAVHY--IIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
L++ +I E+++S Q Q + D++GNYV+Q L +T + L + +++ ++
Sbjct: 346 LEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL-KTCDERYLEM---ILSSIK 401
Query: 309 QHLAALRVMKYGSNV 323
HL L+ YG ++
Sbjct: 402 LHLNELKNYTYGKHI 416
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 106/270 (39%), Gaps = 57/270 (21%)
Query: 91 LASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNH 150
L + D+ G+ SV+ LI +V H+ K + M + GS I Q LE +
Sbjct: 92 LDNADRNGADSVE-LIDLVGHV---------------KEISMDQYGSRFIQQKLEIASLD 135
Query: 151 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 210
+ I+ L + + L G + F + + Q+ + + LS G
Sbjct: 136 DREKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQLIQLADQLKGHILELSLQMYGCR 195
Query: 211 VVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNS 268
VVQ VL + D I LR H + + G+ V+QKC++ ++ + ++I+ +L+
Sbjct: 196 VVQKVLEVVDKDRKIDIVHELRNHILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQ 255
Query: 269 -----------------------------------DQILQVANDKYGNYVIQTALAETMR 293
Q + +DK+GNYV+Q L
Sbjct: 256 ILVLCTHQYGCRVIQRVLEHCHDPVTQSATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKP 315
Query: 294 QDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++R ++ + KL + L +KY SNV
Sbjct: 316 EERSAI----IQKLSGQVVILSKLKYASNV 341
>gi|66815363|ref|XP_641698.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
gi|60469729|gb|EAL67717.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
Length = 782
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 144/278 (51%), Gaps = 10/278 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSS-GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ L + Q G ++LQ+ L DS + +F V ELM YG+++ + ++ C+
Sbjct: 475 IYHLTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDN 534
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+Q I+ KI + F + +G ++KL++ ++ P + +++++K L
Sbjct: 535 NQRRQIVDKIAPSVETF---ACHVYGIHGIQKLLQYLS--PDQVESIIASIKGKVIQLSK 589
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ +I L+ N F+ A + + + H+ GC +N IDN + ++++
Sbjct: 590 DNKGNYLIQSFLKQFSPEVNQFVCDAIMGNIEEICTHKVGCTVVNRCIDNANPEQLEKLV 649
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I+ ++ L + + GNYVVQH+LS + + +L+ + +LS+ K S V++KCL
Sbjct: 650 DKITEHSLKLVQDQFGNYVVQHLLSKNKAYS-SKLIVSLKDNIAELSIQKFSSNVIEKCL 708
Query: 253 KYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTAL 288
+ + Y II+ L +D IL + DKY N+VIQTAL
Sbjct: 709 QLADTPTYELIIKALTEAD-ILSLLQDKYANFVIQTAL 745
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 114 PLLYHVMSALKRLFKFL--MMTKP-GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHE 170
P HV +F L +M P G +I Q ++ N++ I ACH
Sbjct: 496 PDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQIVDKIAPSVETFACHV 555
Query: 171 QGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFA 230
G + + + + + I+ I LS+ GNY++Q L P + +C A
Sbjct: 556 YGIHGIQKLLQYLSPDQVESIIASIKGKVIQLSKDNKGNYLIQSFLKQFSPEVNQFVCDA 615
Query: 231 LRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLN--SDQILQVANDKYGNYVIQTAL 288
+ G+ ++ K G VV +C+ NA +E+L++ ++ L++ D++GNYV+Q L
Sbjct: 616 IMGNIEEICTHKVGCTVVNRCI--DNANPEQLEKLVDKITEHSLKLVQDQFGNYVVQHLL 673
Query: 289 AETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ + +L+ L+ ++A L + K+ SNV
Sbjct: 674 SKNK-----AYSSKLIVSLKDNIAELSIQKFSSNV 703
>gi|154337334|ref|XP_001564900.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061938|emb|CAM38979.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 573
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 7/278 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ A+DQ G +YLQ L + D ++ + V ELM+ QY F+ K + +
Sbjct: 203 VYETAKDQHGCRYLQRWLDTNCDPEVVQVIMDEVIPHVGELMTDQYANFLIQKLFDIMPD 262
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ I Q+ ++A + G+ SV+K+I+ ++ + + AL + L+
Sbjct: 263 D--VRYKVAIVAAPQICMIA-LTPHGTFSVQKMIETISTRAEMEI-ICEALAKDVVRLVK 318
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI + L+ ++IY+A C+ +A ++QGC L ++ ++ ++
Sbjct: 319 DAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEYASPQQKAALV 378
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + + GNYV+Q+VL D + D I + H V LS+ K S V++K L
Sbjct: 379 DQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIALSFLPHLVQLSMNKFSSNVMEKVL 438
Query: 253 KYQNAVHYI--IEELLNSDQILQVANDKYGNYVIQTAL 288
+ + + +EE+ N + I ++ D +GNYV+QTAL
Sbjct: 439 RGASKPVQVLYVEEMCNPEIISRLIQDDFGNYVLQTAL 476
>gi|242072408|ref|XP_002446140.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
gi|241937323|gb|EES10468.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
Length = 761
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 13/311 (4%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
++ DQ GS+++Q+ L + +K+F + L + +G +V KF E ESQL
Sbjct: 424 VSMDQYGSRFIQQKLEIASLDVREKIFPEILSNAIALTTDVFGNYVIQKFFEFATESQLI 483
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+ K+ L S+ +G V+K+++VV + ++ LK + + G
Sbjct: 484 QLADKLKGH---ILELSLQMYGCRVVQKVLEVVDMDRKI--DIVHELKNYVLKCIGDQNG 538
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQILHLI 195
+ VI +C+E + F+ L L L H+ GC + +++ + I++ I
Sbjct: 539 NHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSAIMNEI 598
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
L+ + GNYVVQHVL P +I L G V LS K S V++KCL +
Sbjct: 599 VQQTFHLTDDKFGNYVVQHVLEHGKPEERSSIIQKLSGQVVILSKQKFASNVIEKCLAFG 658
Query: 256 NAVHY--IIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+I E+++S Q Q + D++GNYV+Q L +T L + +++ ++ HL
Sbjct: 659 TPEERDSLIGEIISSGQTFQELMKDQFGNYVVQRVL-QTCDDKYLEM---ILSSIKLHLN 714
Query: 313 ALRVMKYGSNV 323
L+ YG ++
Sbjct: 715 ELKNYTYGKHI 725
>gi|49387789|dbj|BAD26354.1| pumilio/Puf RNA-binding domain-containing protein-like [Oryza
sativa Japonica Group]
gi|49389128|dbj|BAD26407.1| pumilio/Puf RNA-binding domain-containing protein-like [Oryza
sativa Japonica Group]
Length = 498
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 139 VILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 198
VI C++ + A +E+C+ +ACH G + L N + ++ + +I + +N
Sbjct: 304 VIQACIQCFPADIAKVLVDAVVENCIEIACHLNGLLFLQNCLGHITLEEKYKIFTQVCIN 363
Query: 199 AASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK-YQNA 257
+ L++HRSGNY+VQ VL PF ++ I + HYVDL+ K S VV+KCLK + +
Sbjct: 364 SVYLAKHRSGNYIVQDVLEFGHPFHLEIITSCFKTHYVDLARQKYSSRVVEKCLKVFGDL 423
Query: 258 VHYII--EELLNSDQILQVANDKYGNYVIQTAL 288
Y+I E +L+ D + D+ NYVI TAL
Sbjct: 424 EQYLIVCELVLDLDHFRDLVTDEVANYVISTAL 456
>gi|241952587|ref|XP_002419015.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
gi|223642355|emb|CAX42597.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
Length = 789
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 154/311 (49%), Gaps = 43/311 (13%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ +L +DQ G ++LQ L + + I +++++ V ELM +G ++ K N
Sbjct: 449 ILTLCKDQHGCRFLQRELFNETNATLIFNEIYFKV----VELMIDPFGNYLIQKLFTMIN 504
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL------LYHVMSALKR 125
Q ++I + + ++LF +A +D G+ S++KLI V+ + + LY + L R
Sbjct: 505 LEQRLVLINQSS--NELFRIA-LDPHGTRSLQKLIDVIENNEEIEIITRNLYSNIVVLSR 561
Query: 126 -----------LFKFLMMTKPGSSVILQCLEPSYNHKND--FIYQAALEHCLYLACHEQG 172
L KF ++ +S E ++ ++N FI+ + LY+ACH G
Sbjct: 562 DLNGNHVVQKILTKFNTISHNANSSHSSKDETNHENQNQNQFIFDIIQANLLYIACHRHG 621
Query: 173 CINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSL------------ED 220
C L +D + +Q+ I+ + LS GNYVVQ+VL+ ED
Sbjct: 622 CCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVSQTKIIDDEED 681
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ---ILQVAND 277
++D I ++ +++ LSL K GS V++KCLK + + +I+ L+ D Q+ ND
Sbjct: 682 KQVMDNIIQEIKSNFIQLSLHKFGSNVIEKCLKITSISNDLIDNLIELDHGQAFNQLLND 741
Query: 278 KYGNYVIQTAL 288
+GNYV+QT+L
Sbjct: 742 PFGNYVLQTSL 752
>gi|297746040|emb|CBI16096.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 149/317 (47%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E S
Sbjct: 30 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVS 89
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + K+ L S+ +G ++K I+VV P ++ L +
Sbjct: 90 QRRELAGKLYGH---VLTLSLQMYGCRVIQKAIEVVD--PDQKIKMVEELDGHIMRCVRD 144
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQIL 192
+ G+ VI +C+E FI + + L+ H GC + +++ + + + +++
Sbjct: 145 QNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKTQSKVM 204
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + + L++ + GNYVVQHVL P AI L G V +S K S VV+KCL
Sbjct: 205 DEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNVVEKCL 264
Query: 253 KYQNAV--HYIIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ ++ E+L + ++ LQ + D++ NYV+Q L Q R + ++++
Sbjct: 265 TFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSR 320
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 321 IKVHLNALKKYTYGKHI 337
>gi|384488095|gb|EIE80275.1| hypothetical protein RO3G_04980 [Rhizopus delemar RA 99-880]
Length = 807
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 147/324 (45%), Gaps = 36/324 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +S +F V +LM+ +G +V KF E N+
Sbjct: 493 IVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGNQM 552
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALK-RLFKFL-- 130
Q ++ ++ L S+ +G V+K L HV++ + +L K L
Sbjct: 553 QKTILAKQMEGH---VLSLSLQMYGCRVVQKA----------LEHVLTEQQAKLVKELDG 599
Query: 131 -----MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI + +E FI A LA H GC + ++
Sbjct: 600 CILKCIKDQNGNHVIQKAIERVPAQHIQFIINAFHGQVYNLATHPYGCRVIQRMFEHCTE 659
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
++ + +L + L + + GNYV+QH+L P + +RGH + LS K S
Sbjct: 660 NQTEPLLDELHRCTGQLVQDQYGNYVIQHILERGRPVDKTFVIEKIRGHVLQLSKHKFAS 719
Query: 246 FVVQKCLKY--QNAVHYIIEELLN--SDQILQVAN---DKYGNYVIQTALAETMRQDRLS 298
VV+KC+ + + +IEE+L SD L +A D+Y NYVIQ L D +
Sbjct: 720 NVVEKCVDFGSKRDRQLLIEEVLQPRSDGTLPLATMMKDQYANYVIQKML------DVVD 773
Query: 299 VHQR--LVTKLQQHLAALRVMKYG 320
QR LVTK++ HL L+ YG
Sbjct: 774 DDQRELLVTKIKPHLQFLKKYTYG 797
>gi|357130137|ref|XP_003566709.1| PREDICTED: pumilio homolog 1-like [Brachypodium distachyon]
Length = 857
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 526 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTT 585
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
Q+ DQL L S+ +G ++K I+VV + L H+M ++
Sbjct: 586 QIK------ELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMVAELDGHIMRCVR 639
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E FI + L+ H GC + +++
Sbjct: 640 --------DQNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCD 691
Query: 185 GSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K
Sbjct: 692 DPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQMSQQKF 751
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + N V +I E+L S + L+V D++ NYV+Q L Q R
Sbjct: 752 ASNVIEKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYVVQKVLETCDDQQR- 810
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 811 ---EMILTRIKAHLNTLKKYTYGKHI 833
>gi|33589344|gb|AAQ22439.1| RE63138p [Drosophila melanogaster]
Length = 1533
Score = 90.5 bits (223), Expect = 9e-16, Method: Composition-based stats.
Identities = 79/321 (24%), Positives = 150/321 (46%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 1114 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 1172
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ L ++ +G ++K ++ ++ P ++ L
Sbjct: 1173 TPEQKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 1227
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 1228 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 1287
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 1288 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 1343
Query: 247 VVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 1344 VVEKCVTHATRGERTGLIDEVCTFNDNALHMMMKDQYANYVVQK-MIDVSEPTQL---KK 1399
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 1400 LMTKIRPHMAALRKYTYGKHI 1420
Score = 37.4 bits (85), Expect = 9.2, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 13/247 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ LA G + +Q+ L S ++ + G + + Q G V K IE +
Sbjct: 1188 VLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPV 1247
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLM 131
L II F+ Q++ L S +G ++++++ P+L + ++L +
Sbjct: 1248 ALQFII--NAFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ--- 1301
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQ 190
+ G+ VI LE + + L L+ H+ + + + +G R
Sbjct: 1302 -DQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGL 1360
Query: 191 ILHLISVNAASLS---RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
I + + N +L + + NYVVQ ++ + +P + + +R H L G +
Sbjct: 1361 IDEVCTFNDNALHMMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHI 1420
Query: 248 VQKCLKY 254
K KY
Sbjct: 1421 NAKLEKY 1427
>gi|225448992|ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product [Vitis vinifera]
Length = 1026
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 151/319 (47%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSG--DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ + DQ GS+++Q+ L + D +I K+F + + LM+ +G +V KF E
Sbjct: 696 VIEFSTDQYGSRFIQQKLETATVDEKI--KIFPEIIPHSHTLMTDVFGNYVIQKFFEHGT 753
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
ESQ + ++T L S+ +G ++K ++VV +++ L +
Sbjct: 754 ESQRQALASELTGH---ILPLSLQMYGCRVIQKALEVVDV--DRQTQMVAELDGSVMKCV 808
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
+ G+ VI +C+E + FI + + L+ H GC + +++ S +QI
Sbjct: 809 RDQNGNHVIQKCIECVPQDRIQFIISSFYGQVVSLSTHPYGCRVIQRVLEHCDDSSTQQI 868
Query: 192 -LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+ I + L+ + GNYV+QHVL P AI L G V +S K S VV+K
Sbjct: 869 IMDEIMQSVCILAHDQYGNYVIQHVLQYGKPHERSAIISKLAGQIVKMSQQKFASNVVEK 928
Query: 251 CLKYQNAVHY--IIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
CL + ++ E+L S ++ LQ+ D +GNYV+Q + Q R + ++
Sbjct: 929 CLTFGGPEERQLLVTEMLGSTDENEPLQIMMKDPFGNYVVQKVIETCDDQTR----ELIL 984
Query: 305 TKLQQHLAALRVMKYGSNV 323
++++ HL L+ YG ++
Sbjct: 985 SRIKVHLNTLKRYTYGKHI 1003
>gi|358336596|dbj|GAA55061.1| pumilio homolog 2 [Clonorchis sinensis]
Length = 1498
Score = 90.5 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 84/361 (23%), Positives = 156/361 (43%), Gaps = 36/361 (9%)
Query: 1 LQTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGR 60
Q + +H + A+DQ GS+++Q+ L + + + +F + + +LM+ +G
Sbjct: 1094 FQQVTLSQLRDH-MVEFARDQHGSRFIQQKLETASTVEKNAVFAEILPHSGKLMTDVFGN 1152
Query: 61 FVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVM 120
+V KF E + Q L+ ++ Q + A+ +G ++K ++ V P ++
Sbjct: 1153 YVIQKFFEFGTKEQKELLSQRL--QGHVVEFAT-QMYGCRVIQKALESVP--PDTKIRIV 1207
Query: 121 SALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
S L+ + + G+ VI +C+E + DFI A + L+ H GC + +
Sbjct: 1208 SELRPYVTRCVKDQNGNHVIQKCIECVQPSELDFIIAAFRGQVVSLSSHPYGCRVIQRIL 1267
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
++ + + IL + L + + GNYV+QHVL P I +LRG LS
Sbjct: 1268 EHCLAEQTRPILEELHEGVDHLVKDQYGNYVIQHVLEHGLPGDKSRIIQSLRGRVSTLSA 1327
Query: 241 TKCGSFVVQKCLKYQNAVH--YIIEELL------------------NSDQILQVANDKYG 280
K S V++K + +I+E+L ++ ++ + D+Y
Sbjct: 1328 HKFASNVMEKAIANAQPSERAILIDEILHPPTCLNLSGESVTTPSSSNSSLIDMMKDQYA 1387
Query: 281 NYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV------YKWTTASHPCL 334
NYV+Q L R S L++++Q LR YG ++ YK + P L
Sbjct: 1388 NYVVQRMLELAEMDQRRS----LISRIQPIQNLLRKFNYGKHIIAKLEKYKVHPRTRPTL 1443
Query: 335 A 335
+
Sbjct: 1444 S 1444
>gi|20513851|gb|AAM22812.1|AF427791_3 BPM [Hordeum vulgare subsp. vulgare]
Length = 911
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 580 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTT 639
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
Q+ DQL L S+ +G ++K I+VV + L H+M ++
Sbjct: 640 QIK------ELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMVGELDGHIMRCVR 693
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E FI + L+ H GC + +++
Sbjct: 694 --------DQNGNHVIQKCIECIPQDIIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCD 745
Query: 185 GSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+QI+ I + L++ + GNYVVQHVL P AI L G V +S K
Sbjct: 746 DPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQIVQMSQQKF 805
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + N V +I E+L S + L+V D++ NYV+Q L Q R
Sbjct: 806 ASNVIEKCLAFGNPVERQILIGEMLESTTESEPLEVMMKDQFANYVVQKVLETCDDQQR- 864
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 865 ---EMILTRIKAHLNTLKKYTYGKHI 887
>gi|440800301|gb|ELR21340.1| Pumiliofamily RNA binding repeat domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1039
Score = 90.5 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 87/330 (26%), Positives = 148/330 (44%), Gaps = 44/330 (13%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L +F + LM+ +G +V KF E
Sbjct: 716 IVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALRLMTDVFGNYVIQKFFEHGTPE 775
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q+ ++ D+L L S+ +G ++K ++V++ + +K L +
Sbjct: 776 QIKIL------GDELIGNVLALSMQMYGCRVIQKALEVIS-----VEQQEKVVKELEGNI 824
Query: 131 MMT---KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
M + G+ VI +C+E + FI +LA H GC + ++ +
Sbjct: 825 MKCVKDQNGNHVIQKCIEKVPSPLIQFI-------VYHLATHPYGCRVIQRILEYCTEEQ 877
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + SL + + GNYV+QHVL P I LRG + LS K S V
Sbjct: 878 TTPILDELLRCTISLVQDQYGNYVIQHVLEHGKPQDKAPILHKLRGQLLQLSQHKFASNV 937
Query: 248 VQKCLKY-------QNAVHYIIEELL----NSDQILQV-ANDKYGNYVIQTALAETMRQD 295
V+KC++ ++ +IEE+L + LQ+ D+Y NYVIQ L D
Sbjct: 938 VEKCIQCAFGPYGDESDRQMVIEEILQLRNDGATPLQIMMKDQYANYVIQKLL------D 991
Query: 296 RLSVHQR--LVTKLQQHLAALRVMKYGSNV 323
++ +QR L+TK++ H+ AL+ YG ++
Sbjct: 992 VVNENQRDQLITKIRPHVPALKKYTYGKHI 1021
Score = 42.4 bits (98), Expect = 0.30, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%)
Query: 144 LEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 202
LE N+KN F Q + H + + + G + ++ + ++ + I +A L
Sbjct: 696 LEEFRNNKNRKFTLQDIIGHIVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALRL 755
Query: 203 SRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY-- 260
GNYV+Q P I + L G+ + LS+ G V+QK L+ +
Sbjct: 756 MTDVFGNYVIQKFFEHGTPEQIKILGDELIGNVLALSMQMYGCRVIQKALEVISVEQQEK 815
Query: 261 IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMK 318
+++EL I++ D+ GN+VIQ + + + Q +V L H RV++
Sbjct: 816 VVKEL--EGNIMKCVKDQNGNHVIQKCIEKVPS----PLIQFIVYHLATHPYGCRVIQ 867
>gi|156389181|ref|XP_001634870.1| predicted protein [Nematostella vectensis]
gi|156221958|gb|EDO42807.1| predicted protein [Nematostella vectensis]
Length = 342
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 146/319 (45%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E +E
Sbjct: 26 IVEFSQDQHGSRFIQQKLERATNGEKHLVFHEILPAAYSLMTDVFGNYVIQKFFEFGSEE 85
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYH--VMSALKRLFKFLM 131
Q + I L ++ +G ++K ++ + PP + H VM + K +
Sbjct: 86 QKHHLASCIRGH---VLPLALQMYGCRVIQKALECI---PPNVQHELVMELDGHVLK-CV 138
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
+ G+ V+ +C+E H FI A L+ H GC + +++ + I
Sbjct: 139 KDQNGNHVVQKCIECVDPHALQFIIDAFQGQVYALSTHPYGCRVIQRILEHCLTEQTLPI 198
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
L+ + L + + GNYV+QHVL P I LRG+ + LS K S VV+KC
Sbjct: 199 LNEMHDQTDRLVQDQYGNYVIQHVLEHGTPEDRSKIVMQLRGNILPLSQHKFASNVVEKC 258
Query: 252 LKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
+ + + +I+E+ N++ + + D++ NYV+Q + R + L+
Sbjct: 259 VSFASRTERALLIDEVCNTNDGPHNALYTMMKDQFANYVVQKMIDVAEPAQR----KLLM 314
Query: 305 TKLQQHLAALRVMKYGSNV 323
+++ H+A LR YG ++
Sbjct: 315 HRIRPHVATLRKYTYGKHI 333
>gi|237506877|gb|ACQ99191.1| pumilio [Bombyx mori]
Length = 364
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 15/320 (4%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
NH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 28 ANH-IVEFSQDQHGSRFVQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEP 86
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
Q + K+ L ++ +G ++K ++ + P V+ L
Sbjct: 87 GTTEQKTTLAQKVVQVRGHVLNLALQMYGCRVIQKALESIP--PEQQQEVVRKLDGHVLK 144
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 145 CVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCSVIQRILEHCTPEQTA 204
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+L+ + + L + GNYVVQHVL + A+RG + LS K S VV+
Sbjct: 205 PVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVE 264
Query: 250 KCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--L 303
KC+ + +N +I+EL N + + + D++ NYV+Q + D QR L
Sbjct: 265 KCVTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMI------DVAEPTQRKVL 318
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ K++ H+ +LR YG ++
Sbjct: 319 MHKIRPHIGSLRKYTYGKHI 338
>gi|300123315|emb|CBK24588.2| unnamed protein product [Blastocystis hominis]
Length = 497
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 140/317 (44%), Gaps = 18/317 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
++ D G + LQ L + +++ ++ V ELM +G ++F K ++ + Q
Sbjct: 177 MSHDHNGCRALQSCLDNASQKMIPIIYEEVGDSLTELMMDSFGNYLFQKLLDVSSVEQRR 236
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ K+ + + AS D G+ SV+KLI++ +L +M AL+ L G
Sbjct: 237 EVLRKVKHK---IVAASFDVHGTRSVQKLIQICHGQEDMLKDIMDALRGNIAKLSSDSNG 293
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI +CL ++Y+ ++ C+ ++ GC + +D +L I
Sbjct: 294 NHVIQRCLNHMPEEYKVYVYEEVVKSCVNISMQRHGCCVVQRCLDFAPEKYHNMMLDAIV 353
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-- 254
+A L GNYV+Q+++ + I + G V LS K S V++K L +
Sbjct: 354 NSAVELICDPFGNYVIQYLIEKGKESEKERIARCVLGKVVALSCQKYSSNVIEKILLFAP 413
Query: 255 QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
++ + ++ EL ++ V +D Y NYVIQ AL +L +K QQ +
Sbjct: 414 ESVRNEVVAELAECPKLRDVLHDIYANYVIQQAL-------------KLESKGQQRMLYN 460
Query: 315 RVMKYGSNVYKWTTASH 331
V Y + + T H
Sbjct: 461 AVRPYEEELSRSTGGKH 477
>gi|159112491|ref|XP_001706474.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434571|gb|EDO78800.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 652
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 138/304 (45%), Gaps = 18/304 (5%)
Query: 19 QDQEGSQYLQENLS--SGDSRILDKLF---WVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ G + LQ+ L+ SR L +F + L+ G + F K IES + S
Sbjct: 329 KEPTGCKILQQYLADFPDKSRYLLDVFIAEYSTPSLMESLLIHPSGNYCFQKIIESSDAS 388
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--HLPPLLYHVMSALKRLFKFLM 131
Q I+L I QD LF + + G+ S++KL + V+ ++ + A R+ K ++
Sbjct: 389 QRLRILLLI--QDSLFDICQ-NLHGTRSIQKLFERVSSDEEKAIIAQQLGAGDRIIKLIV 445
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ + +C+E FIY + + + H+ GC + +D ++R QI
Sbjct: 446 DIN-GNHCVQRCIETFAPKDCTFIYDQIIRELVLVGTHQHGCCIIQRCLDLCSEAQRVQI 504
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLI-----DAICFALRGHYVDLSLTKCGSF 246
+ I + L R GNYV Q+ L + L D + + GH L K S
Sbjct: 505 VTAIKNHVMELIVDRFGNYVFQYSLEKANNGLCGLISADDLIRPILGHEGSLVNQKFSSH 564
Query: 247 VVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
V+KCLKY + I E L+ S L A DK+GNYV+Q A + + ++ QR++
Sbjct: 565 AVEKCLKYGSRRMRTLITENLMASSSFLSSAMDKFGNYVVQKAFIGATDEQKRTISQRVL 624
Query: 305 TKLQ 308
T +
Sbjct: 625 TSPE 628
>gi|385303897|gb|EIF47942.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 591
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 151/333 (45%), Gaps = 34/333 (10%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ LA+DQ G +YLQ L G ++F V ELM +G ++ K + C
Sbjct: 268 NVLELARDQCGCRYLQRKLDEGXXDSFAQIFGPVCAHAAELMMDPFGNYLMQKVMGCCTV 327
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA----------HLPPLLYHVMSA 122
QL ++ I+ L +A VD+ G+ +++KLI+ + +L P + ++
Sbjct: 328 EQLDAVL--ISAGPSLCAVA-VDQHGTRALQKLIERIXTRKQRMLLERYLAPYVVALIGD 384
Query: 123 LKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN 182
L G+ VI +C++ + FI + + ++ H+ GC L ++
Sbjct: 385 LN-----------GNHVIQKCVQRFRDSDLQFIVDQISANIVPVSTHKHGCCVLQKLLNK 433
Query: 183 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
+ +Q+ I ++ +L + NYVVQ++ S+E L + + LS K
Sbjct: 434 CNMQQIEQLGXQIVQHSLALMEDQYANYVVQYLASMEIDSLNAQLLATVAPCVRQLSCQK 493
Query: 243 CGSFVVQKCLK------YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDR 296
S VV+KCL+ + V +++E+L D + + D+YGNYV+QTA+ + + +
Sbjct: 494 FSSNVVEKCLRIRSYRVFSQFVSRLLDEILLPDVLPVLIRDQYGNYVVQTAMEVSSAEYK 553
Query: 297 LSVHQRLVTKLQQHLAALRVMKYGSNVYKWTTA 329
L R +L L +R +G ++ A
Sbjct: 554 L----RFARELAPLLPEIRFASFGKRIHNXVXA 582
>gi|296086206|emb|CBI31647.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E S
Sbjct: 544 VVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTAS 603
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q+ + ++T L S+ +G ++K I+VV L VM + + +
Sbjct: 604 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVV-DLDQQTKMVMELDGNVMR-CVRD 658
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL- 192
+ G+ VI +C+E FI + + L+ H GC + +++ + ++I+
Sbjct: 659 QNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQRIMM 718
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + L++ + GNYVVQHVL P +I L G V +S K S VV+KCL
Sbjct: 719 DEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQMSQQKFASNVVEKCL 778
Query: 253 KY--QNAVHYIIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ + ++ E+L S ++ LQ + D++ NYV+Q L ET +L + ++ +
Sbjct: 779 TFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLEL---ILNR 834
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 835 IKVHLNALKKYTYGKHI 851
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 4/162 (2%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ + + H I A SL GNYV+Q
Sbjct: 543 HVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTA 602
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGN 281
I + L GH + LSL G V+QK ++ + + +++ D+ GN
Sbjct: 603 SQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMELDGNVMRCVRDQNGN 662
Query: 282 YVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+VIQ + E + QD + Q +++ + L YG V
Sbjct: 663 HVIQKCI-ECIPQDSI---QFIISTFYDQVVTLSTHPYGCRV 700
>gi|356550736|ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6,
chloroplastic-like [Glycine max]
Length = 952
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L S + +F V T +LM+ +G +V KF E +
Sbjct: 628 IVEFSTDQHGSRFIQQKLESCGVEEKELVFKEVLPHTSKLMTDVFGNYVIQKFFEYGSPE 687
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV--AHLPPLLYHVMSALKRLFKFLM 131
Q + ++ Q L S+ +G ++K ++V+ L++ + + R +
Sbjct: 688 QRKELANRLLGQ---ILPLSLQMYGCRVIQKALEVIDLEQKAQLVHELDGNVMRCVR--- 741
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ- 190
+ G+ VI +C+E DFI A L+ H GC + +++ + Q
Sbjct: 742 -DQNGNHVIQKCIESIPTKNIDFIISAFRGQIALLSMHPYGCRVIQRVLEHCSNEVQCQF 800
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
I+ I + +L++ + GNYV QHVL P I L GH LS K S VV+K
Sbjct: 801 IVDEILESVFTLAQDQYGNYVTQHVLERGKPQERSQIIHKLSGHIFQLSQHKFASNVVEK 860
Query: 251 CLKYQNAV--HYIIEELLN----SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
CL+Y +A +I E++ +D +L + D++ NYVIQ R + L+
Sbjct: 861 CLEYGDATDRQLLIAEIVGHDKQNDNLLTMMKDQFANYVIQKVFEICSENQRAT----LL 916
Query: 305 TKLQQHLAALRVMKYGSNV 323
++++ H AL+ YG ++
Sbjct: 917 SRIRLHAHALKKYTYGKHI 935
>gi|302793089|ref|XP_002978310.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
gi|300154331|gb|EFJ20967.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
Length = 354
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 148/317 (46%), Gaps = 28/317 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q +
Sbjct: 8 DQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKELA 67
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFLMMT 133
++ + L S+ +G ++K ++VV + L HVM ++
Sbjct: 68 QQLPSR---VLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR--------D 116
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E + FI A L L+ H GC + +++ +++Q I+
Sbjct: 117 QNGNHVIQKCIECVPADRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIM 176
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + SL++ + GNYVVQHVL I L G V +S K S V++KCL
Sbjct: 177 QEILRSTCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCL 236
Query: 253 KYQNAV--HYIIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
++ +I E+L S ++ LQ + D++ NYV+Q L + R + L+T+
Sbjct: 237 QFGGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVLEICDDRQR----EILLTR 292
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 293 IKVHLHALKKYTYGKHI 309
>gi|342183779|emb|CCC93258.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 556
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 10/280 (3%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++ A+DQ G +YLQ L S D I + + ELM+ QY F+ K +
Sbjct: 197 VYEAAKDQHGCRYLQRLLCDSDPDKDIPRTIMSEIVPHVDELMTDQYANFLVQKLFDI-- 254
Query: 72 ESQLALIILKI-TFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
A + LK+ T ++ G+ SV+K+I+ ++ L+ + AL + L
Sbjct: 255 --MPADVRLKVATVAAPKIAAIALKPHGTFSVQKMIETISSQEELVI-IREALSKDVVRL 311
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ I + L+ + +FIY A C+ +A ++QGC L +++ S+R
Sbjct: 312 VKDANGNHAIQKVLQRFGHADKEFIYAAVAADCVTIAKNKQGCCVLQRCLEHASPSQRST 371
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I ++ GNYV+Q+V+S D ID I A H V L + K S V++K
Sbjct: 372 LVRHILGCCLEIAEDPYGNYVLQYVISTGDNNTIDTIAIAFLPHLVQLCINKFSSNVMEK 431
Query: 251 CL-KYQNAVHYI-IEELLNSDQILQVANDKYGNYVIQTAL 288
L + V + + ++ + + ++ D +GNYV+QTAL
Sbjct: 432 VLGRVSLPVQEMYVNKMCSPEVAARLIQDDFGNYVLQTAL 471
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
I +S + L + +GN+ +Q VL + I A+ V ++ K G V+Q+
Sbjct: 300 IREALSKDVVRLVKDANGNHAIQKVLQRFGHADKEFIYAAVAADCVTIAKNKQGCCVLQR 359
Query: 251 CLKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
CL++ + ++ +L L++A D YGNYV+Q ++ T + + +
Sbjct: 360 CLEHASPSQRSTLVRHILGC--CLEIAEDPYGNYVLQYVIS-TGDNNTIDT---IAIAFL 413
Query: 309 QHLAALRVMKYGSNVYK 325
HL L + K+ SNV +
Sbjct: 414 PHLVQLCINKFSSNVME 430
>gi|45551850|ref|NP_731316.2| pumilio, isoform B [Drosophila melanogaster]
gi|45446432|gb|AAF54338.2| pumilio, isoform B [Drosophila melanogaster]
Length = 1185
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/321 (24%), Positives = 150/321 (46%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 766 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 824
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ L ++ +G ++K ++ ++ P ++ L
Sbjct: 825 TPEQKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 879
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 880 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 939
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 940 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 995
Query: 247 VVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 996 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 1051
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 1052 LMTKIRPHMAALRKYTYGKHI 1072
Score = 37.4 bits (85), Expect = 9.2, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 13/247 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ LA G + +Q+ L S ++ + G + + Q G V K IE +
Sbjct: 840 VLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPV 899
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLM 131
L II F+ Q++ L S +G ++++++ P+L + ++L +
Sbjct: 900 ALQFII--NAFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ--- 953
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQ 190
+ G+ VI LE + + L L+ H+ + + + +G R
Sbjct: 954 -DQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGL 1012
Query: 191 ILHLISVNAASLS---RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
I + + N +L + + NYVVQ ++ + +P + + +R H L G +
Sbjct: 1013 IDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHI 1072
Query: 248 VQKCLKY 254
K KY
Sbjct: 1073 NAKLEKY 1079
>gi|24645262|ref|NP_731314.1| pumilio, isoform A [Drosophila melanogaster]
gi|24645264|ref|NP_524285.2| pumilio, isoform C [Drosophila melanogaster]
gi|24645266|ref|NP_731315.1| pumilio, isoform D [Drosophila melanogaster]
gi|442618162|ref|NP_001262403.1| pumilio, isoform G [Drosophila melanogaster]
gi|34978383|sp|P25822.2|PUM_DROME RecName: Full=Maternal protein pumilio
gi|23170765|gb|AAF54340.2| pumilio, isoform A [Drosophila melanogaster]
gi|23170766|gb|AAN13409.1| pumilio, isoform C [Drosophila melanogaster]
gi|23170767|gb|AAN13410.1| pumilio, isoform D [Drosophila melanogaster]
gi|440217234|gb|AGB95785.1| pumilio, isoform G [Drosophila melanogaster]
Length = 1533
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/321 (24%), Positives = 150/321 (46%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 1114 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 1172
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ L ++ +G ++K ++ ++ P ++ L
Sbjct: 1173 TPEQKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 1227
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 1228 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 1287
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 1288 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 1343
Query: 247 VVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 1344 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 1399
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 1400 LMTKIRPHMAALRKYTYGKHI 1420
Score = 37.4 bits (85), Expect = 9.2, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 13/247 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ LA G + +Q+ L S ++ + G + + Q G V K IE +
Sbjct: 1188 VLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPV 1247
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLM 131
L II F+ Q++ L S +G ++++++ P+L + ++L +
Sbjct: 1248 ALQFII--NAFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ--- 1301
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQ 190
+ G+ VI LE + + L L+ H+ + + + +G R
Sbjct: 1302 -DQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGL 1360
Query: 191 ILHLISVNAASLS---RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
I + + N +L + + NYVVQ ++ + +P + + +R H L G +
Sbjct: 1361 IDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHI 1420
Query: 248 VQKCLKY 254
K KY
Sbjct: 1421 NAKLEKY 1427
>gi|158191|gb|AAB59189.1| pumilio protein [Drosophila melanogaster]
gi|384208|prf||1905306A pumilio gene
Length = 1533
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/321 (24%), Positives = 150/321 (46%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 1114 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 1172
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ L ++ +G ++K ++ ++ P ++ L
Sbjct: 1173 TPEQKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 1227
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 1228 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 1287
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 1288 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 1343
Query: 247 VVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 1344 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 1399
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 1400 LMTKIRPHMAALRKYTYGKHI 1420
Score = 37.4 bits (85), Expect = 9.2, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 13/247 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ LA G + +Q+ L S ++ + G + + Q G V K IE +
Sbjct: 1188 VLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPV 1247
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLM 131
L II F+ Q++ L S +G ++++++ P+L + ++L +
Sbjct: 1248 ALQFII--NAFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ--- 1301
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQ 190
+ G+ VI LE + + L L+ H+ + + + +G R
Sbjct: 1302 -DQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGL 1360
Query: 191 ILHLISVNAASLS---RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
I + + N +L + + NYVVQ ++ + +P + + +R H L G +
Sbjct: 1361 IDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHI 1420
Query: 248 VQKCLKY 254
K KY
Sbjct: 1421 NAKLEKY 1427
>gi|449328595|gb|AGE94872.1| RNA-binding protein [Encephalitozoon cuniculi]
Length = 530
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 26/315 (8%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
S+++DQEGS+ +Q + S + F + EL + +G +V K I E +
Sbjct: 224 SISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEEER 283
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
A +I K+ Q L SV +G V+KL+ V + + +L V L L + +
Sbjct: 284 ARLIAKLAKQINLL---SVHPYGCRVVQKLVDVSSDVDFILEEVRDNLLELIE----DQN 336
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +C+E + + I Q E+ L+LA H+ GC + ++ + K I+ ++
Sbjct: 337 GNHVIQKCIEKCKDR--NIILQQFSENSLFLATHKYGCRVIQRMLEFCREDEIKNIVEVL 394
Query: 196 SVNAASLSRHRSGNYVVQHVLSL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
N +L + GNYV+QH+L++ E +I+ I + Y +LS K S VV++C
Sbjct: 395 ISNIKTLVDDQYGNYVIQHILAVGKEDEKNLVIEKI---IEKSY-ELSRCKFSSNVVEQC 450
Query: 252 LKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQ---TALAETMRQDRLSVHQR 302
+K N + +E + + + + D YGNYV+Q + E +R++ S +
Sbjct: 451 VKLSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQRLYDSSGENIRREMKSALRP 510
Query: 303 LVTKLQQHLAALRVM 317
V L++ A ++
Sbjct: 511 FVRDLKKSPFARHIL 525
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 163 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF 222
C+ ++ ++G + +D++ + + I A LS + GNYV+Q ++ L
Sbjct: 222 CVSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEE 281
Query: 223 LIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNY 282
+ L LS+ G VVQK + + V +I+EE+ D +L++ D+ GN+
Sbjct: 282 ERARLIAKLAKQINLLSVHPYGCRVVQKLVDVSSDVDFILEEV--RDNLLELIEDQNGNH 339
Query: 283 VIQTAL 288
VIQ +
Sbjct: 340 VIQKCI 345
>gi|198433949|ref|XP_002130197.1| PREDICTED: similar to pumilio 2 [Ciona intestinalis]
Length = 1043
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 77/321 (23%), Positives = 148/321 (46%), Gaps = 28/321 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q+ L + +F + G ++LM+ +G +V KF E + E
Sbjct: 695 IVEFSQDQHGSRFIQQKLERATPQEKQLVFNEIIGAAYQLMTDVFGNYVIQKFFEFGSLE 754
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + LA + +G ++K ++ + + L H++ +K
Sbjct: 755 HKLAL---ANCIHGHVLPLA-LQMYGCRVIQKALECIPQEQQVEIVKELDGHLLKCVK-- 808
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E + FI + L+ H GC + +++
Sbjct: 809 ------DQNGNHVVQKCIECVPPAQLQFIVDGFKGQVVGLSSHPYGCRVMQRILEHCNED 862
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + ++ L + + GNYV+QH+L + I LRG + LS K S
Sbjct: 863 QTGPILEELHQHSEMLVKDQYGNYVIQHILEHGRTENKNQIINELRGRILTLSQHKFASN 922
Query: 247 VVQKCLKYQN--AVHYIIEELLNS-DQILQVANDKYGNYVIQTAL-AETMRQDRLSVHQR 302
V++KC+ + + ++I+E+ D + + D+Y NYV+Q L +Q +L +H
Sbjct: 923 VIEKCVSHSSPQTRAWLIDEVCQEPDALFIMMKDQYANYVVQKMLDVADPQQKKLLIH-- 980
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 981 ---KIRPHILTLRKFTYGKHI 998
>gi|302765685|ref|XP_002966263.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
gi|300165683|gb|EFJ32290.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
Length = 324
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 148/317 (46%), Gaps = 28/317 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q +
Sbjct: 8 DQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKELA 67
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFLMMT 133
++ + L S+ +G ++K ++VV + L HVM ++
Sbjct: 68 QQLPSR---VLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR--------D 116
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E + FI A L L+ H GC + +++ +++Q I+
Sbjct: 117 QNGNHVIQKCIECVPPDRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIM 176
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + SL++ + GNYVVQHVL I L G V +S K S V++KCL
Sbjct: 177 QEILRSTCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCL 236
Query: 253 KYQNAV--HYIIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
++ +I E+L S ++ LQ + D++ NYV+Q L + R + L+T+
Sbjct: 237 QFGGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVLEICDDRQR----EILLTR 292
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 293 IKVHLHALKKYTYGKHI 309
>gi|313471417|sp|Q9XI17.2|PUM20_ARATH RecName: Full=Putative pumilio homolog 20; Short=APUM-20;
Short=AtPUM20
Length = 332
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 121/232 (52%), Gaps = 8/232 (3%)
Query: 65 KFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALK 124
+ I ++ +L + +T FL+ + + GS ++KL+ + L +A+
Sbjct: 70 QMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAAIL 126
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
R F ++ K S V+ + + K +Y+ L + ++A + G + LN+ I +
Sbjct: 127 RRFLHIITDKYASYVVRRGMTVFDKKKKKAMYEHILHYASHIARDKHGNLALNDIITD-- 184
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+ R ++ +I+ A LS GN+V+Q VL L D + I +LRGH+VDLS K G
Sbjct: 185 -AYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYG 243
Query: 245 SFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTALAETMRQ 294
S+VV L+ + ++ ++EEL+ D ++++A ++YGN+++ AL T ++
Sbjct: 244 SYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKE 295
>gi|413917932|gb|AFW57864.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 658
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 19/314 (6%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
++ DQ GS+++Q+ L +K+F + L + +G +V KF E E QL
Sbjct: 316 ISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQL- 374
Query: 77 LIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
I DQL L S+ +G V+K+++VV + ++ L+ +
Sbjct: 375 -----IQLADQLKGHILELSLQMYGCRVVQKVLEVVDKDRKI--DIVHELRNHILKCIGD 427
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQIL 192
+ G+ VI +C+E + F+ L L L H+ GC + +++ + +
Sbjct: 428 QNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATM 487
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ I L+ + GNYVVQHVL P AI L G V LS K S V++KCL
Sbjct: 488 NEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCL 547
Query: 253 KYQN--AVHYIIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ +I E+++S Q Q + D++GNYV+Q L +T + L + +++ ++
Sbjct: 548 EFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL-KTCDERYLEM---ILSSIKL 603
Query: 310 HLAALRVMKYGSNV 323
HL L+ YG ++
Sbjct: 604 HLNELKNYTYGKHI 617
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 108/270 (40%), Gaps = 57/270 (21%)
Query: 91 LASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNH 150
L + D+ G+ SV+ LI +V H+ K + M + GS I Q LE +
Sbjct: 293 LDNADRNGADSVE-LIDLVGHV---------------KEISMDQYGSRFIQQKLEIASLD 336
Query: 151 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 210
+ I+ L + + L G + F + + Q+ + + LS G
Sbjct: 337 DREKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQLIQLADQLKGHILELSLQMYGCR 396
Query: 211 VVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNS 268
VVQ VL + D I LR H + + G+ V+QKC++ ++ + ++I+ +L+
Sbjct: 397 VVQKVLEVVDKDRKIDIVHELRNHILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQ 456
Query: 269 ----------------------DQILQVA-------------NDKYGNYVIQTALAETMR 293
D + Q A +DK+GNYV+Q L
Sbjct: 457 ILVLCTHQYGCRVIQRVLEHCHDPVTQSATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKP 516
Query: 294 QDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++R ++ + KL + L +KY SNV
Sbjct: 517 EERSAI----IQKLSGQVVILSKLKYASNV 542
>gi|326512890|dbj|BAK03352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 603
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F V LM+ +G +V KF E
Sbjct: 279 IVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPE 338
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
Q + K+ + S+ +G ++K ++V+ L + ++ L +M
Sbjct: 339 QRRDLAAKLAGH---VVPLSLQMYGCRVIQKALEVME-----LDQKIDLVRELDGNIMRC 390
Query: 132 -MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E F+ A L+ H GC + +++ G R Q
Sbjct: 391 VRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQ 450
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I +A L++ + GNYV QHV+ I L G V +S K S V++
Sbjct: 451 CIIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIE 510
Query: 250 KCLKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KC ++ + + I+E+ +D +L + D+Y NYV+Q L + R + L
Sbjct: 511 KCFQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQKILETCNDEQR----ELL 566
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V++++ HL ALR YG ++
Sbjct: 567 VSRVKGHLQALRKYTYGKHI 586
>gi|68476217|ref|XP_717758.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
gi|46439485|gb|EAK98802.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
Length = 783
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 38/306 (12%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ +L +DQ G ++LQ L + + I +++++ ELM +G ++ K N
Sbjct: 448 ILTLCKDQHGCRFLQRELINETNATLIFNEIYFKA----VELMIDPFGNYLIQKLFTMIN 503
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL------LYHVMSALKR 125
Q ++I + + ++LF +A +D G+ S++KLI V+ + LY + L R
Sbjct: 504 LEQRLVLINQCS--NELFRIA-LDPHGTRSLQKLIDVIETNEEIEIITRNLYSNIVVLSR 560
Query: 126 -----------LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
L KF ++ +S + ++N FI+ + LY+ACH GC
Sbjct: 561 DLNGNHVVQKILTKFNTISSDSNSSDSNRDGAQHQNQNQFIFDIIQANLLYIACHRHGCC 620
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSL---------EDPFLID 225
L +D + +Q+ I+ + LS GNYVVQ+VL+ D +ID
Sbjct: 621 VLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVID 680
Query: 226 AICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ---ILQVANDKYGNY 282
I ++ +++ LSL K GS V++KCLK + +I+ L+ D Q+ ND +GNY
Sbjct: 681 IIIQEIKSNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFNQLLNDPFGNY 740
Query: 283 VIQTAL 288
V+QT+L
Sbjct: 741 VLQTSL 746
>gi|19074973|ref|NP_586479.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19069698|emb|CAD26083.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 530
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 150/315 (47%), Gaps = 26/315 (8%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
S+++DQEGS+ +Q + S + F + EL + +G +V K I E +
Sbjct: 224 SISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEEER 283
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
A +I K+ Q L SV +G ++KL+ V + + +L V L L + +
Sbjct: 284 ARLIAKLAKQINLL---SVHPYGCRVIQKLVDVSSDVDFILEEVRDNLLELIE----DQN 336
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +C+E + + I Q E+ L+LA H+ GC + ++ + K I+ ++
Sbjct: 337 GNHVIQKCIEKCKDR--NIILQQFSENSLFLATHKYGCRVIQRMLEFCREDEIKNIVEVL 394
Query: 196 SVNAASLSRHRSGNYVVQHVLSL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
N +L + GNYV+QH+L++ E +I+ I + Y +LS K S VV++C
Sbjct: 395 ISNIKTLVDDQYGNYVIQHILAVGKEDEKNLVIEKI---IEKSY-ELSRCKFSSNVVEQC 450
Query: 252 LKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQ---TALAETMRQDRLSVHQR 302
+K N + +E + + + + D YGNYV+Q + E +R++ S +
Sbjct: 451 VKLSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQRLYDSSGENIRREMKSALRP 510
Query: 303 LVTKLQQHLAALRVM 317
V L++ A ++
Sbjct: 511 FVRDLKKSPFARHIL 525
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 163 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF 222
C+ ++ ++G + +D++ + + I A LS + GNYV+Q ++ L
Sbjct: 222 CVSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEE 281
Query: 223 LIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNY 282
+ L LS+ G V+QK + + V +I+EE+ D +L++ D+ GN+
Sbjct: 282 ERARLIAKLAKQINLLSVHPYGCRVIQKLVDVSSDVDFILEEV--RDNLLELIEDQNGNH 339
Query: 283 VIQTAL 288
VIQ +
Sbjct: 340 VIQKCI 345
>gi|449459894|ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
gi|449503257|ref|XP_004161912.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1016
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 152/322 (47%), Gaps = 26/322 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+F + DQ GS+++Q+ L + D +F + LM+ +G +V KF E S
Sbjct: 682 VFEFSSDQYGSRFIQQKLETASVEEKDMVFHEIMPQALSLMTDVFGNYVVQKFFEHGTAS 741
Query: 74 QLALIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVA--HLPPLLYHVMSALKRLFK 128
Q+ + DQL L S+ +G ++K I+VV ++ + + R +
Sbjct: 742 QIRELA------DQLNGHVLALSLQMYGCRVIQKAIEVVDVDQQTKMVTELDGQIMRCVR 795
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ +C+E FI + + L+ H GC + +++ +
Sbjct: 796 ----DQNGNHVVQKCIECIPEEAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHNPKT 851
Query: 189 KQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+ I+ I + +L++ + GNYVVQHVL P AI L G V +S K S V
Sbjct: 852 QHIMMDEILQSVCTLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNV 911
Query: 248 VQKCLKYQNAVHY--IIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRLSVHQ 301
++KCL + + ++ E+L + ++ LQV D++ NYV+Q L ET +L +
Sbjct: 912 IEKCLTFGTSAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL-ETCDDQQLEL-- 968
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
++ +++ HL AL+ YG ++
Sbjct: 969 -ILNRIKVHLNALKKYTYGKHI 989
>gi|413917933|gb|AFW57865.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 654
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 19/314 (6%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
++ DQ GS+++Q+ L +K+F + L + +G +V KF E E QL
Sbjct: 316 ISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQL- 374
Query: 77 LIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
I DQL L S+ +G V+K+++VV + ++ L+ +
Sbjct: 375 -----IQLADQLKGHILELSLQMYGCRVVQKVLEVVDKDRKI--DIVHELRNHILKCIGD 427
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQIL 192
+ G+ VI +C+E + F+ L L L H+ GC + +++ + +
Sbjct: 428 QNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATM 487
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ I L+ + GNYVVQHVL P AI L G V LS K S V++KCL
Sbjct: 488 NEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCL 547
Query: 253 KYQN--AVHYIIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ +I E+++S Q Q + D++GNYV+Q L +T + L + +++ ++
Sbjct: 548 EFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL-KTCDERYLEM---ILSSIKL 603
Query: 310 HLAALRVMKYGSNV 323
HL L+ YG ++
Sbjct: 604 HLNELKNYTYGKHI 617
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 108/270 (40%), Gaps = 57/270 (21%)
Query: 91 LASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNH 150
L + D+ G+ SV+ LI +V H+ K + M + GS I Q LE +
Sbjct: 293 LDNADRNGADSVE-LIDLVGHV---------------KEISMDQYGSRFIQQKLEIASLD 336
Query: 151 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 210
+ I+ L + + L G + F + + Q+ + + LS G
Sbjct: 337 DREKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQLIQLADQLKGHILELSLQMYGCR 396
Query: 211 VVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNS 268
VVQ VL + D I LR H + + G+ V+QKC++ ++ + ++I+ +L+
Sbjct: 397 VVQKVLEVVDKDRKIDIVHELRNHILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQ 456
Query: 269 ----------------------DQILQVA-------------NDKYGNYVIQTALAETMR 293
D + Q A +DK+GNYV+Q L
Sbjct: 457 ILVLCTHQYGCRVIQRVLEHCHDPVTQSATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKP 516
Query: 294 QDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++R ++ + KL + L +KY SNV
Sbjct: 517 EERSAI----IQKLSGQVVILSKLKYASNV 542
>gi|356533951|ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 983
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 150/314 (47%), Gaps = 16/314 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+ DQ GS+++Q+ L + K+F + LM+ +G +V KF E ESQ
Sbjct: 660 FSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTESQRK 719
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+ ++T L S+ +G ++K ++VV ++S L + + G
Sbjct: 720 ELANQLTGH---VLPLSLQMYGCRVIQKALEVVD--VDQQGQMVSELNGAIMKCVRDQNG 774
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLI 195
+ VI +C+E K FI + + L+ H GC + +++ +QI + I
Sbjct: 775 NHVIQKCIECVPQDKIQFIVSSFYGQVVALSTHPYGCRVIQRVLEHCDDQNTQQIIMEEI 834
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+ ++L++ + GNYV+QH++ P I L G V +S K S V++KCL +
Sbjct: 835 MQSVSTLAQDQYGNYVIQHIVEHGKPHERTTIISKLAGQIVKMSQQKFASNVIEKCLAFG 894
Query: 256 NAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ ++ E+L + ++ LQ + D +GNYV+Q L ET L + ++++++
Sbjct: 895 SPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVL-ETCDDRSLEL---ILSRIKV 950
Query: 310 HLAALRVMKYGSNV 323
HL AL+ YG ++
Sbjct: 951 HLNALKRYTYGKHI 964
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
++H + + + G + ++ + +I I +A +L GNYV+Q
Sbjct: 654 IDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHG 713
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQVAND 277
+ L GH + LSL G V+QK L+ + ++ EL + I++ D
Sbjct: 714 TESQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQGQMVSEL--NGAIMKCVRD 771
Query: 278 KYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ GN+VIQ + E + QD++ Q +V+ + AL YG V
Sbjct: 772 QNGNHVIQKCI-ECVPQDKI---QFIVSSFYGQVVALSTHPYGCRV 813
>gi|326506354|dbj|BAJ86495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 844
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F V LM+ +G +V KF E
Sbjct: 520 IVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPE 579
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
Q + K+ + S+ +G ++K ++V+ L + ++ L +M
Sbjct: 580 QRRDLAAKLAGH---VVPLSLQMYGCRVIQKALEVME-----LDQKIDLVRELDGNIMRC 631
Query: 132 -MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E F+ A L+ H GC + +++ G R Q
Sbjct: 632 VRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQ 691
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I +A L++ + GNYV QHV+ I L G V +S K S V++
Sbjct: 692 CIIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIE 751
Query: 250 KCLKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KC ++ + + I+E+ +D +L + D+Y NYV+Q L + R + L
Sbjct: 752 KCFQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQKILETCNDEQR----ELL 807
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V++++ HL ALR YG ++
Sbjct: 808 VSRVKGHLQALRKYTYGKHI 827
>gi|115441005|ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|215704672|dbj|BAG94300.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1060
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + D +F + LM+ +G +V KF E + +
Sbjct: 730 VVEFSADQYGSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAA 789
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
Q + DQLF L S+ +G ++K I+VV + L H+M ++
Sbjct: 790 Q------RRELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMRCVR 843
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E FI + L+ H GC + +++
Sbjct: 844 --------DQNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCT 895
Query: 185 GSRRKQI-LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ ++I + I + L++ + GNYVVQHVL P I L G + +S K
Sbjct: 896 DPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQKF 955
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRL 297
S VV+KCL + +I E+L + ++ LQ + D++GNYV+Q L Q R
Sbjct: 956 ASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQR- 1014
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++++++ HL+AL+ YG ++
Sbjct: 1015 ---ELILSRVKVHLSALKKYTYGKHI 1037
>gi|384485031|gb|EIE77211.1| hypothetical protein RO3G_01915 [Rhizopus delemar RA 99-880]
Length = 649
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 144/314 (45%), Gaps = 28/314 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + S +F + +LM+ +G +V KF E +++Q ++
Sbjct: 337 DQHGSRFIQQKLETASSEEKQMVFEEILPNALQLMTDVFGNYVIQKFFEHGSQAQKTVLA 396
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT----KP 135
+ + + S+ +G V+K ++ V L +AL R ++ +
Sbjct: 397 KHM---ETHVVSLSLQMYGCRVVQKALEYV------LTDQQAALVRELDGCVLKCVKDQN 447
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ V+ + +E H FI +LA H GC + ++ + +L +
Sbjct: 448 GNHVVQKAIERVPAHHVQFIIDILHGQVYHLATHPYGCRVIQRVFEHCPKEQTIHLLEEL 507
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+ N + L + + GNYV+QH+L + + ++GH + LS K S VV+KC+ Y
Sbjct: 508 NRNTSQLVQDQYGNYVIQHILEHGEAKDKALVISKVKGHVLQLSKHKFASNVVEKCVAYG 567
Query: 256 NA--VHYIIEELL-----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTK 306
N +IEE+L + ++ + D+Y NYV+Q L D + QR L+ K
Sbjct: 568 NPQDRQELIEEVLLTRPDGTYPLMSMMKDQYANYVVQKML------DVVDGSQRDLLIAK 621
Query: 307 LQQHLAALRVMKYG 320
++ HL L+ YG
Sbjct: 622 IKPHLQGLKKYTYG 635
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ ++ + I NA L GNYV+Q
Sbjct: 330 HAVEFSGDQHGSRFIQQKLETASSEEKQMVFEEILPNALQLMTDVFGNYVIQKFFEHGSQ 389
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY----QNAVHYIIEELLNSDQILQVAND 277
+ + H V LSL G VVQK L+Y Q A ++ EL +L+ D
Sbjct: 390 AQKTVLAKHMETHVVSLSLQMYGCRVVQKALEYVLTDQQAA--LVRELDGC--VLKCVKD 445
Query: 278 KYGNYVIQTALAETMRQDRLSVH--QRLVTKLQQHLAALRVMKYGSNV 323
+ GN+V+Q A+ +R+ H Q ++ L + L YG V
Sbjct: 446 QNGNHVVQKAI------ERVPAHHVQFIIDILHGQVYHLATHPYGCRV 487
>gi|289449229|dbj|BAI77478.1| pumilio [Bombyx mori]
Length = 416
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 18/320 (5%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
NH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 83 ANH-IVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEF 141
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
Q + K+ L ++ +GS ++K ++ + P V+ L
Sbjct: 142 GTTEQKTTLAQKVRGH---VLNLALQMYGSRVIQKALESIP--PEQQQEVVRELDGHVLK 196
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 197 CVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPEQTA 256
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+L+ + + L + GNYVVQHVL + A+RG + LS K S VV+
Sbjct: 257 PVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVE 316
Query: 250 KCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--L 303
KC+ + +N +I+EL N + + + D++ NYV+Q + D QR L
Sbjct: 317 KCVTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMI------DVAEPTQRKVL 370
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ K++ H+ +LR YG ++
Sbjct: 371 MHKIRPHIGSLRKYTYGKHI 390
>gi|413921572|gb|AFW61504.1| hypothetical protein ZEAMMB73_884166 [Zea mays]
Length = 986
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 148/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F V LM+ +G +V KF E
Sbjct: 662 IIEYSADQHGSRFIQQKLENCTAEEKAYVFAEVLPHASSLMTDVFGNYVIQKFFEHGTRE 721
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ L S+ +G ++K ++V+ L + + L +M
Sbjct: 722 QRRDLATKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIDLVHELDGHVMRC 773
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E F+ A L+ H GC + +++ G+ + Q
Sbjct: 774 VRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGTSQSQ 833
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I +A L++ + GNYV QHVL + I L G V +S K S V++
Sbjct: 834 CIVDEILQSACVLAQDQYGNYVTQHVLERGNAHERSQIIIKLAGQVVTMSQNKFASNVIE 893
Query: 250 KCLKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KC ++ + + I+E+ +D +L + D+Y NYV+Q L ET +++ + L
Sbjct: 894 KCFQHGDMAERDLLIRQIVEQTEGNDNLLAMMKDQYANYVVQKIL-ETCNENQREL---L 949
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V++++ H+ ALR YG ++
Sbjct: 950 VSRVKGHMQALRKYTYGKHI 969
>gi|20160612|dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|125572616|gb|EAZ14131.1| hypothetical protein OsJ_04054 [Oryza sativa Japonica Group]
Length = 1048
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + D +F + LM+ +G +V KF E + +
Sbjct: 718 VVEFSADQYGSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAA 777
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
Q + DQLF L S+ +G ++K I+VV + L H+M ++
Sbjct: 778 Q------RRELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMRCVR 831
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E FI + L+ H GC + +++
Sbjct: 832 --------DQNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCT 883
Query: 185 GSRRKQI-LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ ++I + I + L++ + GNYVVQHVL P I L G + +S K
Sbjct: 884 DPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQKF 943
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRL 297
S VV+KCL + +I E+L + ++ LQ + D++GNYV+Q L Q R
Sbjct: 944 ASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQR- 1002
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++++++ HL+AL+ YG ++
Sbjct: 1003 ---ELILSRVKVHLSALKKYTYGKHI 1025
>gi|238880509|gb|EEQ44147.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 783
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 38/306 (12%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ +L +DQ G ++LQ L + + I +++++ ELM +G ++ K N
Sbjct: 448 ILTLCKDQHGCRFLQRELINETNATLIFNEIYFKA----VELMIDPFGNYLIQKLFTMIN 503
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL------LYHVMSALKR 125
Q ++I + + ++LF +A +D G+ S++KLI V+ + LY + L R
Sbjct: 504 LEQRLVLINQCS--NELFRIA-LDPHGTRSLQKLIDVIETNEEIEIITRNLYSNIVVLSR 560
Query: 126 -----------LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
L KF ++ +S + ++N FI+ + LY+ACH GC
Sbjct: 561 DLNGNHVVQKILTKFNTISSDSNSSDSNRDGAQHQNQNQFIFDIIQANLLYIACHRHGCC 620
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSL---------EDPFLID 225
L +D + +Q+ I+ + LS GNYVVQ+VL+ D +ID
Sbjct: 621 VLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVID 680
Query: 226 AICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ---ILQVANDKYGNY 282
I ++ +++ LSL K GS V++KCLK + +I+ L+ D Q+ ND +GNY
Sbjct: 681 IIIQEIKSNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFNQLLNDPFGNY 740
Query: 283 VIQTAL 288
V+QT+L
Sbjct: 741 VLQTSL 746
>gi|356574619|ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 1000
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 150/314 (47%), Gaps = 16/314 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+ DQ GS+++Q+ L + K+F + LM+ +G +V KF E +SQ
Sbjct: 659 FSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTDSQRK 718
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+ ++T L S+ +G ++K ++VV ++S L + + G
Sbjct: 719 ELASQLTGH---VLPLSLQMYGCRVIQKALEVVDA--DQQGQLVSELNGAIMKCVRDQNG 773
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLI 195
+ VI +C+E K FI + + L+ H GC + +++ +QI + I
Sbjct: 774 NHVIQKCIECVPQDKIQFIVSSFYGQVVLLSTHPYGCRVIQRVLEHCDDLNTQQIIMDEI 833
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+ +L++ + GNYV+QH++ P AI L G V +S K S V++KCL +
Sbjct: 834 MQSVGTLAQDQYGNYVIQHIVEHGKPHERTAIISKLAGQIVKMSQQKFASNVIEKCLAFG 893
Query: 256 NAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ ++ E+L + ++ LQ + D +GNYV+Q L ET L + ++++++
Sbjct: 894 SPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVL-ETCDDRSLEL---ILSRIKV 949
Query: 310 HLAALRVMKYGSNV 323
HL AL+ YG ++
Sbjct: 950 HLNALKRYTYGKHI 963
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
++H + + + G + ++ + +I I +A +L GNYV+Q
Sbjct: 653 IDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHG 712
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQVAND 277
+ L GH + LSL G V+QK L+ +A ++ EL + I++ D
Sbjct: 713 TDSQRKELASQLTGHVLPLSLQMYGCRVIQKALEVVDADQQGQLVSEL--NGAIMKCVRD 770
Query: 278 KYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ GN+VIQ + E + QD++ Q +V+ + L YG V
Sbjct: 771 QNGNHVIQKCI-ECVPQDKI---QFIVSSFYGQVVLLSTHPYGCRV 812
>gi|255544506|ref|XP_002513314.1| pumilio, putative [Ricinus communis]
gi|223547222|gb|EEF48717.1| pumilio, putative [Ricinus communis]
Length = 1004
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 152/316 (48%), Gaps = 26/316 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L +F V +LM+ +G +V KF E + Q +
Sbjct: 686 DQHGSRFIQQKLEHCSFEEKVSVFKEVLPHASKLMTDVFGNYVIQKFFEHGSPDQRKELA 745
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K++ Q L S+ +G ++K ++V+ L ++ L ++ + G
Sbjct: 746 DKLSGQ---MLQLSLQMYGCRVIQKALEVIE-----LDQKTQLVQELDGHVLRCVHDQNG 797
Query: 137 SSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILH 193
+ VI +C+E P+ N +FI A LA H GC + +++ + Q I+
Sbjct: 798 NHVIQKCIECVPTMN--IEFIISAFQGQVAALATHPYGCRVIQRVLEHCSDDLQSQCIVD 855
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I +A L++ + GNYV QHVL P+ I L G V +S K S V++KCL+
Sbjct: 856 EILESAYLLAQDQYGNYVTQHVLERGKPYERSQIISKLTGKIVQMSQHKYASNVIEKCLE 915
Query: 254 YQNAVHY--IIEELLN----SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+ + + +IEE++ SDQ L + D++ NYV+Q L + + R + L++++
Sbjct: 916 HGSPIEQELLIEEIIGQSEESDQFLTMMKDQFANYVVQKILEISNDKQR----EILLSRI 971
Query: 308 QQHLAALRVMKYGSNV 323
+ HL AL+ YG ++
Sbjct: 972 RIHLHALKKYTYGKHI 987
>gi|297803524|ref|XP_002869646.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
gi|297315482|gb|EFH45905.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 150/325 (46%), Gaps = 25/325 (7%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
T H + + DQ GS+++Q+ L + +F + +LM+ +G +V KF E
Sbjct: 532 TGH-IVEFSADQHGSRFIQQKLENCKLEEKAAVFREILPHACKLMTDVFGNYVIQKFFEY 590
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
N +Q + ++ Q + S+ +G ++K + V+ P + L
Sbjct: 591 GNSAQRKELADQLMGQ---IVPLSLQMYGCRVIQKALDVIE--PDQRVRLARELDGQVMR 645
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR- 188
+ + G+ VI +C+E + F+ A L+ H GC + ++ +
Sbjct: 646 CVRDQNGNHVIQKCIENIPADRVGFMLHAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQC 705
Query: 189 ----KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
++IL + V LS+ + GNYV QHVL + I L GH V LSL K
Sbjct: 706 RFITEEILESVCV----LSKDQYGNYVTQHVLEKGTSEERERIVRKLSGHIVQLSLHKFA 761
Query: 245 SFVVQKCLKYQNAVHY--IIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLS 298
S V++KCL+Y + II+E+ D+ +L + D+YGNYV+Q + ET D+ +
Sbjct: 762 SNVIEKCLEYGGRIERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQ-KIFETCTADQRA 820
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
L ++++ H +AL+ YG ++
Sbjct: 821 T---LFSRVRMHASALKKYTYGKHI 842
>gi|303391583|ref|XP_003074021.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
gi|303303170|gb|ADM12661.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
Length = 528
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 145/311 (46%), Gaps = 18/311 (5%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
++++DQEGS+ +Q + S + F + EL + +G +V K I E +
Sbjct: 222 NVSKDQEGSRCIQRKMDSISREEISWFFNNIVEAASELSANLFGNYVVQKIIPLLTEGER 281
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
++I K+ Q L SV +G V+KL+ V + + +L V L L + +
Sbjct: 282 TILITKLVGQIHLL---SVHPYGCRVVQKLVDVSSDVDFILEEVKGNLLELIE----DQN 334
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +C+E + K I Q E+ L+LA H+ GC + ++ K K I+ ++
Sbjct: 335 GNHVIQKCIEKCKDRK--IILQQFSENSLFLATHKYGCRVIQRMLEFCKKDEIKGIVEVL 392
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
N +L + GNYV+QH+L++ + + + +LS K S VV++C+K
Sbjct: 393 IGNIKTLVDDQYGNYVIQHILAVGKEEERNLVIERIIEKSYELSKCKFSSNVVEQCVKLS 452
Query: 256 NA------VHYIIEELLNSDQILQVANDKYGNYVIQ---TALAETMRQDRLSVHQRLVTK 306
N + +E + + + D YGNYV+Q + E +R++ + + V
Sbjct: 453 NNGQREQFLEKFLEPVGGKPGMYSMCTDMYGNYVVQRLYDSSGEGVRKEIKNTLRPFVKD 512
Query: 307 LQQHLAALRVM 317
L++ A ++
Sbjct: 513 LKKSPFARHIL 523
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 151 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 210
KN F E C+ ++ ++G + +D++ + I A+ LS + GNY
Sbjct: 208 KNIFGGNTMKEICINVSKDQEGSRCIQRKMDSISREEISWFFNNIVEAASELSANLFGNY 267
Query: 211 VVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ 270
VVQ ++ L + L G LS+ G VVQK + + V +I+EE+ +
Sbjct: 268 VVQKIIPLLTEGERTILITKLVGQIHLLSVHPYGCRVVQKLVDVSSDVDFILEEVKGN-- 325
Query: 271 ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+L++ D+ GN+VIQ + + +DR + Q + ++ L KYG V
Sbjct: 326 LLELIEDQNGNHVIQKCIEKC--KDRKIILQ----QFSENSLFLATHKYGCRV 372
>gi|68476406|ref|XP_717664.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
gi|46439384|gb|EAK98702.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
Length = 783
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 38/306 (12%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ +L +DQ G ++LQ L + + I +++++ ELM +G ++ K N
Sbjct: 448 ILTLCKDQHGCRFLQRELINETNATLIFNEIYFKA----VELMIDPFGNYLIQKLFTMIN 503
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL------LYHVMSALKR 125
Q ++I + + ++LF +A +D G+ S++KLI V+ + LY + L R
Sbjct: 504 LEQRLVLINQCS--NELFRIA-LDPHGTRSLQKLIDVIETNEEIEIITRNLYSNIVVLSR 560
Query: 126 -----------LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
L KF ++ +S + ++N FI+ + LY+ACH GC
Sbjct: 561 DLNGNHVVQKILTKFNTISSDSNSSDSNRDGVQHQNQNQFIFDIIQANLLYIACHRHGCC 620
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSL---------EDPFLID 225
L +D + +Q+ I+ + LS GNYVVQ+VL+ D +ID
Sbjct: 621 VLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVID 680
Query: 226 AICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ---ILQVANDKYGNY 282
I ++ +++ LSL K GS V++KCLK + +I+ L+ D Q+ ND +GNY
Sbjct: 681 IIIQEIKSNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFNQLLNDPFGNY 740
Query: 283 VIQTAL 288
V+QT+L
Sbjct: 741 VLQTSL 746
>gi|356558296|ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 982
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 154/323 (47%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ + DQ GS+++Q+ L S G+ + L +F V +LM+ +G +V KF E +
Sbjct: 659 IVEFSSDQHGSRFIQQKLESCSGEEKAL--VFKEVLPHASKLMTDVFGNYVIQKFFEYGS 716
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--HLPPLLYHVMSALKRLFKF 129
Q + ++ Q L S+ +G ++K ++V+ L++ + + R +
Sbjct: 717 SEQRRELADRLVGQ---ILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVR- 772
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRR 188
+ G+ VI +C+E K FI A L+ H GC + +++ M S+
Sbjct: 773 ---DQNGNHVIQKCIESIQTKKISFILSAFRGQVATLSMHPYGCRVIQRVLEHCMDESQC 829
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
+ I+ I + +L++ + GNYV QHVL P I L GH V LS K S VV
Sbjct: 830 QFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQILSKLSGHIVQLSQHKFASNVV 889
Query: 249 QKCLKYQNAVHY--IIEELLNS----DQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
+KCL+Y +A ++ E+ D +L + D++ NYV+Q + D S +QR
Sbjct: 890 EKCLEYGDATERELLVAEIFGHDDQCDNLLTMMKDQFANYVVQKVI------DICSENQR 943
Query: 303 --LVTKLQQHLAALRVMKYGSNV 323
L++ ++ H AL+ YG ++
Sbjct: 944 AMLLSHVRIHAHALKKYTYGKHI 966
>gi|254568676|ref|XP_002491448.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|238031245|emb|CAY69168.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|328352042|emb|CCA38441.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 759
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 23/318 (7%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
A+DQ GS+++Q+ LS D +F + ++ELM+ +G +V K+ E +E Q A
Sbjct: 430 FARDQHGSRFIQQQLSKATKEEKDTIFEEIEPTSYELMTDVFGNYVIQKYFEHGSEEQKA 489
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ +T + Q S+ +G V++ ++ V + + S L+ L+ + G
Sbjct: 490 RLLKIMTGKVQSL---SLQMYGCRVVQRALEFVQLEQQI--EIASELQDNVLQLVEDQNG 544
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E + FI ++ +H +L+ H GC + ++ S +K IL ++S
Sbjct: 545 NHVIQKSIEKISFDQISFILESLRQHIYHLSTHPYGCRVIQRLLEYCSESEQKFILEVLS 604
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
+ L + + GNYV+QH+L + I + + V S K S V+KC+ Y N
Sbjct: 605 NHIFYLIQDQYGNYVIQHILEFGEEGYRSTITEIVTKNLVMFSKHKFASNAVEKCIIYGN 664
Query: 257 AV--HYIIEELLNSDQILQVAN------------DKYGNYVIQTALAETMRQDRLSVHQR 302
H + ELL ++ L+V D + NYV+Q + D+ +
Sbjct: 665 KEHRHMLFNELLKDNKSLEVTTVDDNSALALMMKDPFANYVVQKMVDALDEDDK----KL 720
Query: 303 LVTKLQQHLAALRVMKYG 320
L+ K++Q+L + Y
Sbjct: 721 LIIKIKQYLKQISKSSYA 738
>gi|326512976|dbj|BAK03395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + D +F + LM+ +G +V KF E + +
Sbjct: 553 VVEFSADQYGSRFIQQKLETASVEEKDMVFTEIMPQALTLMTDVFGNYVVQKFFEHGSTA 612
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
Q+ + DQL L S+ +G ++K I+VV + L HVM ++
Sbjct: 613 QIKELA------DQLIGRVLALSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHVMRCVR 666
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E + +FI + L+ H GC + +++
Sbjct: 667 --------DQNGNHVIQKCIECIPQNIIEFIVSTFYGQVVVLSTHPYGCRVIQRVLEHCD 718
Query: 185 GSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ +QI+ + + L+ + GNYVVQHV+ P AI L G V +S K
Sbjct: 719 DPKTQQIMMDEVLQSVCLLATDQYGNYVVQHVMEHGKPHERSAIIEKLIGQIVQMSQQKF 778
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNSDQILQ----VANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + + V +I E+L S + + + D++ NYV+Q L Q R
Sbjct: 779 ASNVIEKCLSFGSPVERQILIGEMLGSTEESEHLEVMMKDQFANYVVQKVLETCDDQQR- 837
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL L+ YG ++
Sbjct: 838 ---EAILTRIKAHLNTLKKYTYGKHI 860
>gi|348574638|ref|XP_003473097.1| PREDICTED: pumilio homolog 2 isoform 1 [Cavia porcellus]
Length = 1068
Score = 88.6 bits (218), Expect = 4e-15, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E N
Sbjct: 735 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 794
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 795 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 848
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 849 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 903
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 904 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 963
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 964 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 1022
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 1023 MH-----KIRPHITTLRKYTYGKHI 1042
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
L H + + + G + ++ + R+ + + I A L GNYV+Q
Sbjct: 732 LGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFG 791
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
+ A+ +RGH + L+L G V+QK L+ + +++EL +L+ D
Sbjct: 792 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKEL--DGHVLKCVKD 849
Query: 278 KYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ GN+V+Q + E ++ L Q ++ + + L YG V
Sbjct: 850 QNGNHVVQKCI-ECVQPQSL---QFIIDAFKGQVFVLSTHPYGCRV 891
>gi|159491213|ref|XP_001703567.1| puf protein [Chlamydomonas reinhardtii]
gi|158270641|gb|EDO96479.1| puf protein [Chlamydomonas reinhardtii]
Length = 314
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 147/315 (46%), Gaps = 26/315 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + L+ F V LM+ +G +V KF+E Q +
Sbjct: 2 DQHGSRFIQQKLEGVAAEDLEAAFAEVLPRILHLMTDVFGNYVVQKFLEHGTPEQR--LK 59
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLFKFLMMT 133
L + L S+ +G V+K ++ + L H+M ++
Sbjct: 60 LGRALHGHVLQL-SLQMYGCRVVQKALETFPEEAQMELVTELDGHIMRCVR--------D 110
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E H+ + L + L+ H GC + ++++K +RR+ ++
Sbjct: 111 QNGNHVIQKCIECVPTHRIAAVLDNFLLCVVPLSTHPFGCRIIQRILEHVKDARRRSAVM 170
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I A L++ + GNYV+QHVL P +I +L V LS+ K S VV+KCL
Sbjct: 171 SDILAAAVQLTQDQYGNYVIQHVLERGTPEERASIAASLASSVVPLSMHKFASNVVEKCL 230
Query: 253 KYQNAVHY--IIEELLNS--DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
Y + ++ +L + D + + D++GNYV+Q L + R + ++ +++
Sbjct: 231 TYGSTADRDLLVSRMLGAHGDPVQAMMKDQFGNYVVQKVLEVCSDEQR----EVMLARVR 286
Query: 309 QHLAALRVMKYGSNV 323
Q L AL+ YG ++
Sbjct: 287 QQLHALKRYTYGKHI 301
>gi|326521732|dbj|BAK00442.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 824
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F V LM+ +G +V KF E
Sbjct: 500 IVDFSADQHGSRFIQQKLENCTAEEKAVVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPE 559
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ + S+ +G ++K ++V+ L + ++ L +M
Sbjct: 560 QRRDLAAKLAGH---VVPLSLQMYGCRVIQKALEVME-----LDQKIDLVRELDGNIMRC 611
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E F+ A L+ H GC + +++ G R Q
Sbjct: 612 VRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQ 671
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I +A L++ + GNYV QHV+ I L G V +S K S V++
Sbjct: 672 CIIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIE 731
Query: 250 KCLKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KC ++ + + I+E+ +D +L + D+Y NYV+Q L + R + L
Sbjct: 732 KCFQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQKILETCNDEQR----ELL 787
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V++++ HL ALR YG ++
Sbjct: 788 VSRVKGHLQALRKYTYGKHI 807
>gi|328866169|gb|EGG14555.1| RNA binding protein [Dictyostelium fasciculatum]
Length = 652
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 17/318 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ ++DQ GS+ +Q+ + + ++ +F V LM+ +G +V KF E +
Sbjct: 332 IAEFSKDQVGSRIIQQKIENANAEDKQLVFDEVIVAVHSLMTDVFGNYVLQKFFEHGSSD 391
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++ K+ LL ++ +G ++K I+ + ++ ++ L +
Sbjct: 392 QKRILAEKLKGN---ILLLALQMYGCRVIQKAIESIELDQQIM--LIQELDGHIVQCVTD 446
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +C+E + FI + H +LA H GC + +++ + IL
Sbjct: 447 QNGNHVIQKCIEKIPTNLIQFIIDSFNGHIYHLATHPYGCRVIQRILEHCSEQQVAPILE 506
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ A SL + + GNYV+QHVL AI L LS K S V++KC++
Sbjct: 507 ELMRCAVSLVQDQYGNYVIQHVLEHGTQSDKSAIVQKLHNQVYQLSQHKFASNVIEKCVQ 566
Query: 254 YQNAVH--YIIEELL------NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
Y + II E+L S +L+V D Y NYVIQ L + R + ++
Sbjct: 567 YGSTAERAMIINEILGDQSGTTSSAMLKVLKDPYANYVIQKILDIVDQSQR----EMIIQ 622
Query: 306 KLQQHLAALRVMKYGSNV 323
++Q ++A LR + YG ++
Sbjct: 623 RIQPYIATLRKVTYGKHI 640
>gi|126305609|ref|XP_001369426.1| PREDICTED: pumilio homolog 2 isoform 1 [Monodelphis domestica]
Length = 1082
Score = 88.2 bits (217), Expect = 5e-15, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 143/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E N
Sbjct: 749 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 808
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 809 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVK--- 862
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 863 -----DQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 917
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+L + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 918 TLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNV 977
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + + + D+Y NYV+Q + D
Sbjct: 978 VEKCVSHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1031
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR L+ K++ H+ LR YG ++
Sbjct: 1032 QRKVLMHKIRPHVTTLRKYTYGKHI 1056
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
L H + + + G + ++ + R+ + + I A L GNYV+Q
Sbjct: 746 LGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFG 805
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
+ A+ +RGH + L+L G V+QK L+ + + +++EL +L+ D
Sbjct: 806 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKEL--DGHVLKCVKD 863
Query: 278 KYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ GN+V+Q + E ++ L Q ++ + + L YG V
Sbjct: 864 QNGNHVVQKCI-ECVQPQAL---QFIIDAFKGQVFVLSTHPYGCRV 905
>gi|340518502|gb|EGR48743.1| predicted protein [Trichoderma reesei QM6a]
Length = 341
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 16/286 (5%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +S +++F + +LM +G +V KF E SQL I
Sbjct: 35 DQHGSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNYVIQKFFEYG--SQLQKKI 92
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLMMTKPGS 137
L + ++ L SV + V+K ++ +V L + + R+ K + G+
Sbjct: 93 LAEKMKGKVVDL-SVQVYACRVVQKALEHILVEQQAALTRELEPEILRVIK----DQNGN 147
Query: 138 SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 197
V+ + +E DFI +A LA H GC + +++ + + +I+ +
Sbjct: 148 HVVQKIIELVPRQHIDFIMKAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGELHA 207
Query: 198 NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN- 256
+A L + GNYV QHV+ +P + I + G + LS K S VV+KC++Y
Sbjct: 208 SAQLLITDQYGNYVAQHVIQNGEPEDRERIIRLVMGQLLTLSKHKFASNVVEKCIEYGTP 267
Query: 257 AVHYIIEELLNS------DQILQVANDKYGNYVIQTALAETMRQDR 296
A I E L + + + Q+ D++GNYVIQ L + +R
Sbjct: 268 AQRTTIREQLTTAGPDGNNPLQQMMRDQFGNYVIQKLLGQLQGDER 313
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ ++QI I NA L + GNYV+Q
Sbjct: 28 HAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNYVIQKFFEYGSQ 87
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLN-----SDQILQVAN 276
+ ++G VDLS+ VVQK L+ H ++E+ +IL+V
Sbjct: 88 LQKKILAEKMKGKVVDLSVQVYACRVVQKALE-----HILVEQQAALTRELEPEILRVIK 142
Query: 277 DKYGNYVIQTALAETMRQ 294
D+ GN+V+Q + RQ
Sbjct: 143 DQNGNHVVQKIIELVPRQ 160
>gi|313245253|emb|CBY40040.1| unnamed protein product [Oikopleura dioica]
Length = 525
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 19/320 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENL---SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFI 67
NH + +QDQ GS+++Q+ L + GD ++ F + ++ L+ +G +V KF+
Sbjct: 198 NH-MVEFSQDQHGSRFIQQKLERCTPGDRELV---FNEILSSSYNLIIDVFGNYVIQKFL 253
Query: 68 ESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
E + Q ++ I L S+ +G ++K ++ +HLP ++ L+
Sbjct: 254 EFGSVEQRVQLLNSIKGH---VLQLSLQMYGCRVIQKGLEAFSHLPEHQIDIVKELEGHV 310
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ V+ + +E + +FI A L+ H GC + +++ +
Sbjct: 311 LKCVKDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTDQ 370
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
QIL I L+ + GNYVVQH+L I +RG V L+ K S V
Sbjct: 371 TAQILDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNV 430
Query: 248 VQKCL--KYQNAVHYIIEELLNSDQIL-QVANDKYGNYVIQTALA-ETMRQDRLSVHQRL 303
++KC+ + +I+E+ S + L + D+Y NYV+Q L M Q R +L
Sbjct: 431 IEKCVTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQKR-----KL 485
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V++++ H+ L+ YG ++
Sbjct: 486 VSQMKPHINNLKRYTYGKHI 505
>gi|8394|emb|CAA44474.1| pumilio [Drosophila melanogaster]
Length = 1533
Score = 87.8 bits (216), Expect = 6e-15, Method: Composition-based stats.
Identities = 78/321 (24%), Positives = 151/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 1114 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 1172
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ L ++ +G ++K ++ ++ P ++ L
Sbjct: 1173 TPEQKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 1227
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 1228 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 1287
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 1288 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 1343
Query: 247 VVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 1344 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 1399
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK+++++AALR YG ++
Sbjct: 1400 LMTKIRKNMAALRKYTYGKHI 1420
>gi|308163019|gb|EFO65384.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia P15]
Length = 652
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 139/307 (45%), Gaps = 20/307 (6%)
Query: 17 LAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSG----QYGRFVFGKFIESC 70
L ++ G + LQ+ L+ SR L +F + T LM G G + F K IE
Sbjct: 327 LFKEPTGCKTLQQYLTDFPDKSRYLLDVF-IAEYNTPSLMEGLLIHPSGNYCFQKVIEVS 385
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--HLPPLLYHVMSALKRLFK 128
+ SQ I+L I QD LF + + G+ S++KL + V+ ++ + R+ K
Sbjct: 386 DASQRLKILLLI--QDSLFEICH-NLHGTRSIQKLFERVSSDEEKAIIAQQLGTGDRIIK 442
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
++ G+ + +C+E FIY + + ++ H+ GC + +D ++R
Sbjct: 443 LIVDIN-GNHCVQRCIETFAPKDCTFIYDQIIRELVLVSTHQHGCCIIQRCLDLCSEAQR 501
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFL-----IDAICFALRGHYVDLSLTKC 243
QI+ I + L R GNYV Q+ L + L D + + GH L K
Sbjct: 502 VQIVTAIKTHVMELIVDRFGNYVFQYSLEKANNGLCGSISADDLIRPILGHEGSLVSQKF 561
Query: 244 GSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
S V+KCLKY + I E L+ SD L +A DK+GNYVIQ + + + Q
Sbjct: 562 SSHAVEKCLKYGSRKIRTLITENLMASDSFLSLAMDKFGNYVIQRVFTCATDEQKRIISQ 621
Query: 302 RLVTKLQ 308
R++ +
Sbjct: 622 RVLASPE 628
>gi|26450884|dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana]
gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis thaliana]
Length = 330
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 148/314 (47%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F + + LM+ +G +V KF E Q +
Sbjct: 2 DQYGSRFIQQKLKTATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELA 61
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
++T L S+ +G ++K ++VV L +K L +M + G
Sbjct: 62 EQVTGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKCVHDQNG 113
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLI 195
+ VI +C+E FI + L L+ H GC + ++++ ++ I+ I
Sbjct: 114 NHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEI 173
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY- 254
+ +L++ + GNYV+QH++ P I L G V +S K S VV+KCL +
Sbjct: 174 MDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFG 233
Query: 255 -QNAVHYIIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ E+L + ++ LQ + D +GNYV+Q L ET L++ ++++++
Sbjct: 234 GPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL---ILSRIKV 289
Query: 310 HLAALRVMKYGSNV 323
HL AL+ YG ++
Sbjct: 290 HLNALKRYTYGKHI 303
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 45/231 (19%)
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
M + GS I Q L+ + + + + I+ L + L G + F ++ +RK++
Sbjct: 1 MDQYGSRFIQQKLKTATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKEL 60
Query: 192 LHLISVNAASLS------------------------------------RHRSGNYVVQHV 215
++ + +LS ++GN+V+Q
Sbjct: 61 AEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQNGNHVIQKC 120
Query: 216 LSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH---YIIEELLNSDQIL 272
+ I I + G + LS G V+Q+ L++ + + I+EE+++S +
Sbjct: 121 IERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDS--VC 178
Query: 273 QVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+A D+YGNYVIQ + +R ++ KL + + K+ SNV
Sbjct: 179 TLAQDQYGNYVIQHIIQHGKPHER----SEIINKLAGQIVKMSQQKFASNV 225
>gi|224112727|ref|XP_002316273.1| predicted protein [Populus trichocarpa]
gi|222865313|gb|EEF02444.1| predicted protein [Populus trichocarpa]
Length = 938
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 156/323 (48%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + +F + LM+ +G +V KF E + S
Sbjct: 620 VVEFSADQYGSRFIQQKLETAMTEEKNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGSAS 679
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALKRLF 127
Q+ + ++T L S+ +G ++K I+VV + L H+M ++
Sbjct: 680 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVVELDQQTKMVTELDGHIMRCVR--- 733
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI +C+E FI + + L+ H GC + +++ + ++
Sbjct: 734 -----DQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCQDTK 788
Query: 188 RKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
++I+ I + L++ + GNYVVQHVL P AI L G V +S K S
Sbjct: 789 TQRIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 848
Query: 247 VVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVH 300
V++KCL + +++E+L + ++ LQ + D++ NYV+Q L ET +L +
Sbjct: 849 VIEKCLTFGTPAERQALVDEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLEL- 906
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
++ +++ HL AL+ YG ++
Sbjct: 907 --ILNRIKVHLNALKKYTYGKHI 927
>gi|297790299|ref|XP_002863049.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
gi|297308854|gb|EFH39308.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
Length = 503
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 170 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 229
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ D + L S+ +G ++K I+VV L + +K L +M
Sbjct: 230 QRRELGEKLI--DNVLPL-SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 281
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRK 189
+ G+ V+ +C+E +FI H + L+ H GC + +++ +
Sbjct: 282 VRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQS 341
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 342 KVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVE 401
Query: 250 KCLKYQNAVHY--IIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 402 KCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 457
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG ++
Sbjct: 458 LTRIKVHLNALKKYTYGKHI 477
>gi|125562207|gb|EAZ07655.1| hypothetical protein OsI_29908 [Oryza sativa Indica Group]
Length = 1806
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 142/314 (45%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q +
Sbjct: 1481 DQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLA 1540
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K+ L S+ +G ++K ++V+ L + ++ L +M + G
Sbjct: 1541 TKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIELVRELDGNIMRCVRDQNG 1592
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E F+ A L+ H GC + +++ G + Q I+ I
Sbjct: 1593 NHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEI 1652
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A L++ + GNYV QHVL I L G V +S K S V++KC ++
Sbjct: 1653 LESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHG 1712
Query: 256 NA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ + I+++ +D +L + D+Y NYV+Q L Q R + L+++++
Sbjct: 1713 DMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQR----ELLLSRVKG 1768
Query: 310 HLAALRVMKYGSNV 323
HL ALR YG ++
Sbjct: 1769 HLQALRKYTYGKHI 1782
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++N + + + +A+SL GNYV+Q P
Sbjct: 1474 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 1533
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYI--IEELLNSDQILQVANDKY 279
+ L GH + LSL G V+QK L+ I + EL I++ D+
Sbjct: 1534 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVREL--DGNIMRCVRDQN 1591
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GN+VIQ + E + + + +V+ + +A+L + YG V
Sbjct: 1592 GNHVIQKCI-ECVPTEHIGF---VVSAFRGQVASLSMHPYGCRV 1631
>gi|9293981|dbj|BAB01884.1| RNA binding protein-like [Arabidopsis thaliana]
Length = 962
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L +F V +LM+ +G +V KFIE +Q ++
Sbjct: 640 DQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELV 699
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM---MTKPG 136
++ Q + S+ +G ++K ++V+ + ++ L ++ + G
Sbjct: 700 KQLAGQ---MVSLSLQMYGCRVIQKALEVID-----VDQKTELIRELDGNVLKCVRDQNG 751
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E + F+ A L+ H GC + +++ I+ I
Sbjct: 752 NHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEI 811
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A +L+ + GNYV QHVL P I L G+ V +S K S VV+KCL++
Sbjct: 812 LESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHA 871
Query: 256 NAV--HYIIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ ++IEE++ + +L + D++ NYV+Q L + Q R + LV +++
Sbjct: 872 DSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQR----EILVQRMKI 927
Query: 310 HLAALRVMKYGSNV 323
HL +LR YG ++
Sbjct: 928 HLQSLRKYTYGKHI 941
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 45/238 (18%)
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
R+ +F + + GS I Q LE + + ++ L L G + FI++
Sbjct: 632 RVVEFRHVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGT 691
Query: 185 GSRRKQILHLISVNAASLS------------------------------------RHRSG 208
++R++++ ++ SLS R ++G
Sbjct: 692 PAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNG 751
Query: 209 NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY---QNAVHYIIEEL 265
N+V+Q + I + A RG LS G V+Q+ L++ H II+E+
Sbjct: 752 NHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEI 811
Query: 266 LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L S +A+D+YGNYV Q L +R ++++ KL ++ + KY SNV
Sbjct: 812 LES--AFALAHDQYGNYVTQHVLERGKPDER----RQIIEKLTGNVVQMSQHKYASNV 863
>gi|297834954|ref|XP_002885359.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
gi|297331199|gb|EFH61618.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
Length = 965
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L +F V +LM+ +G +V KFIE +Q ++
Sbjct: 643 DQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELV 702
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM---MTKPG 136
++ Q + S+ +G ++K ++V+ + ++ L ++ + G
Sbjct: 703 KQLAGQ---MVSLSLQMYGCRVIQKALEVID-----VDQKTELIRELDGNVLKCVRDQNG 754
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E + F+ A L+ H GC + +++ I+ I
Sbjct: 755 NHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEI 814
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A +L+ + GNYV QHVL P I L G+ V +S K S VV+KCL++
Sbjct: 815 LESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHA 874
Query: 256 NAV--HYIIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ ++IEE++ + +L + D++ NYV+Q L + Q R + LV +++
Sbjct: 875 DSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQR----EILVQRMKI 930
Query: 310 HLAALRVMKYGSNV 323
HL +LR YG ++
Sbjct: 931 HLQSLRKYTYGKHI 944
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 45/238 (18%)
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
R+ +F + + GS I Q LE + + ++ L L G + FI++
Sbjct: 635 RVVEFRHVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGT 694
Query: 185 GSRRKQILHLISVNAASLS------------------------------------RHRSG 208
++R++++ ++ SLS R ++G
Sbjct: 695 PAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNG 754
Query: 209 NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY---QNAVHYIIEEL 265
N+V+Q + I + A RG LS G V+Q+ L++ H II+E+
Sbjct: 755 NHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEI 814
Query: 266 LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L S +A+D+YGNYV Q L +R ++++ KL ++ + KY SNV
Sbjct: 815 LES--AFALAHDQYGNYVTQHVLERGKPDER----RQIIEKLTGNVVQMSQHKYASNV 866
>gi|242054955|ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
gi|241928598|gb|EES01743.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
Length = 1057
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F + LM+ +G +V KF E +
Sbjct: 727 VVEFSADQYGSRFIQQKLETATVEEKNMVFEEIMPHALSLMTDVFGNYVVQKFFEHGSAE 786
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLF 127
Q + K+ L S+ +G ++K I+VV + L H+M ++
Sbjct: 787 QRRELADKLLGH---VLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMKCVR--- 840
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI +C+E FI H + L+ H GC + +++ +
Sbjct: 841 -----DQNGNHVIQKCIECVPEDSIQFIISTFYGHVVPLSTHPYGCRVIQRVLEHCADPK 895
Query: 188 RKQI-LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+QI + I + L++ + GNYVVQHVL P I L G + +S K S
Sbjct: 896 TQQIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKFASN 955
Query: 247 VVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVH 300
VV+KCL + A +I E+L + ++ LQ + D++GNYV+Q L Q R
Sbjct: 956 VVEKCLTFGGATEREVLISEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQR---- 1011
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++++++ HL AL+ YG ++
Sbjct: 1012 ELILSRVKVHLNALKKYTYGKHI 1034
>gi|222640878|gb|EEE69010.1| hypothetical protein OsJ_27957 [Oryza sativa Japonica Group]
Length = 1138
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 142/314 (45%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q +
Sbjct: 820 DQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLA 879
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K+ L S+ +G ++K ++V+ L + ++ L +M + G
Sbjct: 880 TKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIELVRELDGNIMRCVRDQNG 931
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E F+ A L+ H GC + +++ G + Q I+ I
Sbjct: 932 NHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEI 991
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A L++ + GNYV QHVL I L G V +S K S V++KC ++
Sbjct: 992 LESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHG 1051
Query: 256 NA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ + I+++ +D +L + D+Y NYV+Q L Q R + L+++++
Sbjct: 1052 DMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQR----ELLLSRVKG 1107
Query: 310 HLAALRVMKYGSNV 323
HL ALR YG ++
Sbjct: 1108 HLQALRKYTYGKHI 1121
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++N + + + +A+SL GNYV+Q P
Sbjct: 813 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 872
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYI--IEELLNSDQILQVANDKY 279
+ L GH + LSL G V+QK L+ I + EL I++ D+
Sbjct: 873 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVREL--DGNIMRCVRDQN 930
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GN+VIQ + E + + + +V+ + +A+L + YG V
Sbjct: 931 GNHVIQKCI-ECVPTEHIGF---VVSAFRGQVASLSMHPYGCRV 970
>gi|30685690|ref|NP_188660.3| pumilio 5 [Arabidopsis thaliana]
gi|313471415|sp|Q9LJX4.2|PUM5_ARATH RecName: Full=Pumilio homolog 5; Short=APUM-5; Short=AtPUM5
gi|332642831|gb|AEE76352.1| pumilio 5 [Arabidopsis thaliana]
Length = 961
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L +F V +LM+ +G +V KFIE +Q ++
Sbjct: 639 DQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELV 698
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM---MTKPG 136
++ Q + S+ +G ++K ++V+ + ++ L ++ + G
Sbjct: 699 KQLAGQ---MVSLSLQMYGCRVIQKALEVID-----VDQKTELIRELDGNVLKCVRDQNG 750
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E + F+ A L+ H GC + +++ I+ I
Sbjct: 751 NHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEI 810
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A +L+ + GNYV QHVL P I L G+ V +S K S VV+KCL++
Sbjct: 811 LESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHA 870
Query: 256 NAV--HYIIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
++ ++IEE++ + +L + D++ NYV+Q L + Q R + LV +++
Sbjct: 871 DSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQR----EILVQRMKI 926
Query: 310 HLAALRVMKYGSNV 323
HL +LR YG ++
Sbjct: 927 HLQSLRKYTYGKHI 940
>gi|302855378|ref|XP_002959184.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
gi|300255440|gb|EFJ39746.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
Length = 409
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 141/310 (45%), Gaps = 22/310 (7%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
FSL DQ+GS+++QEN S +D F V +LM+ +G +V KF+E
Sbjct: 84 FSL--DQDGSRFVQENFESLRPEEIDAAFNDVLPHLLQLMTDMFGNYVVQKFLEHGTPEH 141
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK 134
A I I L S+ FG +++K ++V + ++S L + +
Sbjct: 142 RARIANAIQGN---VLSLSLQLFGCRTMQKALEVFTEDQQV--DIVSELNGHVMRCVCDQ 196
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILH 193
GS VI +C+E H + + + + L+ H GC + + + ++ RR+ ++
Sbjct: 197 NGSHVIQKCIEYVPPHHSAGLLDNIVTCVVPLSTHLHGCRIIRHILKYVRDQRRRAAVMA 256
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I A L++ + GNYV+QHVL P +I +L V LS+ K S V++KCL
Sbjct: 257 DILGAAVQLAQDQYGNYVIQHVLERGTPEEKSSIIRSLSATVVQLSMHKFASNVIEKCLI 316
Query: 254 YQNAVHY--IIEELLN------------SDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
+ + II +L SD + + + +GNYV+Q L + R ++
Sbjct: 317 HGSTADRDLIINRMLGAQTLQIQLETGYSDPVQGMMRNPFGNYVVQKVLEVCTDEQREAM 376
Query: 300 HQRLVTKLQQ 309
R+ +L +
Sbjct: 377 LARVRMQLHE 386
>gi|328698836|ref|XP_001950648.2| PREDICTED: pumilio homolog 2-like isoform 1 [Acyrthosiphon pisum]
Length = 983
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 36/329 (10%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 644 TNH-IVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEF 702
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSAL 123
Q + + K+ L ++ +G ++K ++ V + L HV+ +
Sbjct: 703 GTPEQKSTLAQKVRGH---VLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCV 759
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K + G+ V+ +C+E H FI A L L+ H GC + +++
Sbjct: 760 K--------DQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHC 811
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLS---LEDPFLIDAICFALRGHYVDLSL 240
+ IL + + L + + GNYV+QHVL ED + IC ++RG + LS
Sbjct: 812 TSEQTAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKL--IC-SVRGKVLTLSQ 868
Query: 241 TKCGSFVVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDR 296
K S VV+KC+ + ++ +IEE+ N + + + D+Y NYV+Q L D
Sbjct: 869 HKFASNVVEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKML------DV 922
Query: 297 LSVHQR--LVTKLQQHLAALRVMKYGSNV 323
QR L+ K++ H A+LR YG ++
Sbjct: 923 CESSQRKVLMHKIRPHFASLRKYTYGKHI 951
>gi|359486781|ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1015
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E S
Sbjct: 685 VVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTAS 744
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q+ + ++T L S+ +G ++K I+VV L VM + + +
Sbjct: 745 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVV-DLDQQTKMVMELDGNVMR-CVRD 799
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL- 192
+ G+ VI +C+E FI + + L+ H GC + +++ + ++I+
Sbjct: 800 QNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQRIMM 859
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + L++ + GNYVVQHVL P +I L G V +S K S VV+KCL
Sbjct: 860 DEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQMSQQKFASNVVEKCL 919
Query: 253 KY--QNAVHYIIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ + ++ E+L S ++ LQ + D++ NYV+Q L ET +L + ++ +
Sbjct: 920 TFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLEL---ILNR 975
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 976 IKVHLNALKKYTYGKHI 992
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 4/162 (2%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ + + H I A SL GNYV+Q
Sbjct: 684 HVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTA 743
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGN 281
I + L GH + LSL G V+QK ++ + + +++ D+ GN
Sbjct: 744 SQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMELDGNVMRCVRDQNGN 803
Query: 282 YVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+VIQ + E + QD + Q +++ + L YG V
Sbjct: 804 HVIQKCI-ECIPQDSI---QFIISTFYDQVVTLSTHPYGCRV 841
>gi|262411024|gb|ACY66878.1| P30Sh115J16 [Saccharum hybrid cultivar R570]
Length = 764
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q +
Sbjct: 446 DQHGSRFIQQKLENCTAEEKASVFAEVLPHASSLMTDVFGNYVIQKFFEHGTREQRRDLA 505
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K+ L S+ +G ++K ++V+ L + + L +M + G
Sbjct: 506 TKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIDLVHELDGHVMRCVRDQNG 557
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E F+ A L+ H GC + +++ G+ + Q I+ I
Sbjct: 558 NHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGNSQGQCIIDEI 617
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A L++ + GNYV QHVL I L G V +S K S V++KC ++
Sbjct: 618 LQSACILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKFASNVIEKCFQHG 677
Query: 256 NA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ + I+E+ +D +L + D+Y NYV+Q L ET +++ + L+++++
Sbjct: 678 DIAERDLLIRQIVEQTEANDNLLAMMKDQYANYVVQKIL-ETCNENQREL---LLSRVKG 733
Query: 310 HLAALRVMKYGSNV 323
H+ ALR YG ++
Sbjct: 734 HMQALRKYTYGKHI 747
>gi|158828285|gb|ABW81161.1| unknown [Capsella rubella]
Length = 991
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 149/323 (46%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 627 VVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEH---- 682
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
L + D+LF L S+ +G ++K I+VV L + +K L +
Sbjct: 683 --GLPPQRRELGDKLFENVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 735
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGS 186
M + G+ V+ +C+E +FI H + L+ H GC + +++
Sbjct: 736 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVSLSTHPYGCRVIQRVLEHCHDPD 795
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ +++ I + L++ + GNYVVQHVL P I L G V +S K S
Sbjct: 796 TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 855
Query: 247 VVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVH 300
VV+KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R
Sbjct: 856 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR---- 911
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL AL+ YG +V
Sbjct: 912 ELILTRIKVHLNALKKYTYGKHV 934
>gi|413924047|gb|AFW63979.1| hypothetical protein ZEAMMB73_492361 [Zea mays]
Length = 1002
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 150/319 (47%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + +F + LM+ +G +V KF E E+
Sbjct: 674 VVEFSSDQYGSRFIQQKLETASTEQKNMIFPEILPQARTLMTDVFGNYVIQKFFEYGTET 733
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL--M 131
Q + T L S+ +G ++K ++VV + AL+ + +
Sbjct: 734 QTKQLA---TLLKGFVLQLSLQMYGCRVIQKALEVVE----VEQQTQMALELDGSIMRCV 786
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQ 190
+ G+ VI +C+E + FI A H + L+ H GC + +++ S +
Sbjct: 787 RDQNGNHVIQKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRILEHCDDESTQNA 846
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I + +L+ + GNYV+QHVL P I L G V +S K S VV+K
Sbjct: 847 MMEEIMQSVVTLTEDQYGNYVIQHVLQYGKPEERSTIIAQLAGQIVKMSQQKFASNVVEK 906
Query: 251 CLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
CL + + +I E+L + ++ LQ + D++ NYV+Q L Q+R + ++
Sbjct: 907 CLTFGSPEQRQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQNR----ELIL 962
Query: 305 TKLQQHLAALRVMKYGSNV 323
++++ HL AL+ YG ++
Sbjct: 963 SRIKVHLNALKRYTYGKHI 981
>gi|351699449|gb|EHB02368.1| Pumilio-like protein 2 [Heterocephalus glaber]
Length = 1059
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 74/319 (23%), Positives = 144/319 (45%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 724 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 783
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ ++ ++ ++ L +
Sbjct: 784 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 840
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 841 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 900
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYVVQHVL P + +RG + LS K S VV+KC+
Sbjct: 901 ELHQHTEQLVQDQYGNYVVQHVLEHGRPEDRSRVVSEVRGEVLALSQHKFASNVVEKCVT 960
Query: 254 YQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLSVHQRLV 304
+ + +I+E+ + + + D+Y NYV+Q +AE Q ++ +H
Sbjct: 961 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMVDMAEPA-QRKIIMH---- 1015
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1016 -KIRPHITTLRKYTYGKHI 1033
Score = 38.1 bits (87), Expect = 5.9, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLSS--GDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + LA G + +Q+ L S D +++ ++ + G + + Q G
Sbjct: 784 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNG 843
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F+L S +G ++++++ L +
Sbjct: 844 NHVVQKCIECVQPQSLQFII--DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTL--PI 898
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ V+ LE + L L+ H+ +
Sbjct: 899 LEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDRSRVVSEVRGEVLALSQHKFASNVVEKC 958
Query: 180 IDNMKGSRRKQILHLISVN-------AASLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + ++ + + NYVVQ ++ + +P I +R
Sbjct: 959 VTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMVDMAEPAQRKIIMHKIR 1018
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 1019 PHITTLRKYTYGKHILAKLEKY 1040
>gi|218185985|gb|EEC68412.1| hypothetical protein OsI_36587 [Oryza sativa Indica Group]
Length = 1013
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 15/301 (4%)
Query: 31 LSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFL 90
L+ G D L V + L Q+G + K IE N+ Q ++ KIT L
Sbjct: 712 LAGGGRPAWDFLLDVAALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSS---AL 768
Query: 91 LASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNH 150
S D++G+ ++ ++ + ++ LK F +L M K GS V+ CL+ +
Sbjct: 769 GLSEDQYGNYVIQFVVNLGIEW--ATSKIVKELKGNFGYLSMQKCGSHVVENCLKQASEL 826
Query: 151 KNDFIYQA--ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 208
+ I A ++ G + + KG + I +A +L
Sbjct: 827 DREMIIHELMADPKLPHIMADPFGNFVIQTALKECKGELHSSFVEAIRPHAPAL--QNDV 884
Query: 209 NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAV--HYIIEELL 266
NYV+Q V++L + I L+GH+ LS+ KCGS VV+ CLK + + II EL+
Sbjct: 885 NYVIQFVVNLGIEWATSKIVKELKGHFGYLSMQKCGSHVVENCLKQASELDREMIIHELM 944
Query: 267 NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYKW 326
++ + D +GN+VIQTAL E + +H V ++ H AL+ Y V
Sbjct: 945 ADPKLPHIMADPFGNFVIQTALKEC----KGELHSSFVEAIRPHAPALQNDVYAKRVLSK 1000
Query: 327 T 327
T
Sbjct: 1001 T 1001
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 21/138 (15%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ LA+DQ G ++LQ+ + G +K+ + ELM +G ++ K +E C++
Sbjct: 422 IYMLAKDQNGCRFLQKVFTEGTKEDFEKVLAEIIDHFGELMIDPFGNYLVQKLLEECSDD 481
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + QD S V+K+I + + P + V+SAL LM
Sbjct: 482 QRT----QKNIQD-------------SHVQKVIDTI-NTPEQISKVVSALSPGAMRLMTD 523
Query: 134 KPGSSVILQCLE---PSY 148
GS V +CL+ P Y
Sbjct: 524 TNGSHVAQRCLKKLLPEY 541
>gi|22327539|ref|NP_199125.2| pumilio 14 [Arabidopsis thaliana]
gi|75339252|sp|Q4PSD1.1|PUM14_ARATH RecName: Full=Pumilio homolog 14; Short=APUM-14; Short=AtPUM14
gi|67633854|gb|AAY78851.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332007528|gb|AED94911.1| pumilio 14 [Arabidopsis thaliana]
Length = 518
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 156/316 (49%), Gaps = 18/316 (5%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
+ A+D+E S+ L ++ G +D ++ + G ELM YG V + C+ Q+
Sbjct: 207 AFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQI 266
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-AHLPPLLYHVMSALKRLFKFLMMTK 134
++ +T Q F+ +D G+++++ L+ + + ++ ++ + L +
Sbjct: 267 VQLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSKSN 326
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINL-----NNFIDNMKGSRRK 189
VIL C H + + +++C +A + GC L + + N++ R++
Sbjct: 327 HAIFVILACFRLFPLHCR-LLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLE-IRQR 384
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I+ NA L + GNYVVQ+++ L + +LIDA+ L G+Y L+ K GS VQ
Sbjct: 385 LIMEAIA-NALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQ 443
Query: 250 KCLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
K LK + ++ +I+ L D +L D +GNYVIQTA + + V + L +
Sbjct: 444 KLLKLRWIDSRVIVIDLLREIDTLLL---DPFGNYVIQTAWFVS----KDDVRRMLRYHI 496
Query: 308 QQHLAALRVMKYGSNV 323
++++ +R K+G+ V
Sbjct: 497 ERNIPMMRCNKFGNKV 512
>gi|255733004|ref|XP_002551425.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131166|gb|EER30727.1| predicted protein [Candida tropicalis MYA-3404]
Length = 675
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 46/294 (15%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ L + + D +F + ELM +G ++ K E N
Sbjct: 373 ILSLCKDQHGCRFLQRELYNETN--TDLIFNEICPKISELMIDPFGNYLVQKLFEMVNSD 430
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLI--------------KVVAHLPPLLYHV 119
Q LI++K T + L S+D G+ + +KLI KV H+ L+Y
Sbjct: 431 Q-RLILIKNTSSE--LLRISLDPHGTRAFQKLIDVIETEEEINIIIDKVSPHVVTLIYD- 486
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
S L + I+ L P + Y+ ++ +ACH GC L
Sbjct: 487 -SNGNHLIQ----------KIITKLAP------EIFYEIICDNLFSIACHRHGCCVLQKC 529
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
+D+ S+RKQ+ IS LS GNYV+Q++L D ID + ++ + ++L
Sbjct: 530 LDHGSESQRKQLSLEISKYTFELSLDPFGNYVIQYILKKGDKESIDTLLEKIKFNLINLC 589
Query: 240 LTKCGSFVVQKCLKYQNAVHYIIEELLN-----SDQILQVANDKYGNYVIQTAL 288
K GS +++ L+ + + EL+N SD+ ++ ND +GNYVIQT+L
Sbjct: 590 TNKFGSNIIECLLR----IPILSTELINCLIEKSDEFYKMVNDPFGNYVIQTSL 639
>gi|125528359|gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indica Group]
Length = 1046
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + D +F + LM+ +G +V KF E + +
Sbjct: 716 VVEFSADQYGSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAA 775
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
Q + DQLF L S+ +G ++K I+VV + L H+M ++
Sbjct: 776 Q------RRELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMRCVR 829
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E FI + L+ H GC + +++
Sbjct: 830 --------DQNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCT 881
Query: 185 GSRRKQI-LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ ++I + I + L++ + GNYVVQHVL P I L G + +S K
Sbjct: 882 YPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKF 941
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRL 297
S VV+KCL + +I E+L + ++ LQ + D++GNYV+Q L Q R
Sbjct: 942 ASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQR- 1000
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++++++ HL+AL+ YG ++
Sbjct: 1001 ---ELILSRVKVHLSALKKYTYGKHI 1023
>gi|298709331|emb|CBJ31267.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 729
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 154/352 (43%), Gaps = 54/352 (15%)
Query: 14 LFSLAQDQEGSQYLQENL-------SSGDSRILDKLFWVVSGFTFE-------LMSGQYG 59
++S+++DQ G + LQ+ L GD+ VS E +M +G
Sbjct: 388 VYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPSEDDAVSAIFMEALPNLSMMMIDPFG 447
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
++F K ++ Q L + +T + A+V+ G+ V+K+++ L
Sbjct: 448 NYLFQKLFVKVDDHQRLLAVEAVTDR---MPEAAVNLHGTRCVQKVVE--------LCRT 496
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNH------------KNDFIYQAALEHCLYLA 167
+ + + L G SV+ L+P+ NH +NDF+ +A + +A
Sbjct: 497 DAQAAVIARSL-----GPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVA 551
Query: 168 CHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLI 224
H GC L +D + R +++ ++ N L + GNYVVQ+VL S E+ ++
Sbjct: 552 IHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYM- 610
Query: 225 DAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNY 282
+C A GH LS K S V++ CL+ +EEL +I ++ D+Y NY
Sbjct: 611 --LCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANY 668
Query: 283 VIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYKWTTASHPCL 334
V+Q AL ++ L +LV ++ HL +++ G + +P +
Sbjct: 669 VVQRALTVANNEEGL----KLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTV 716
>gi|440291461|gb|ELP84730.1| meiotic coiled-coil protein, putative [Entamoeba invadens IP1]
Length = 470
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 15/324 (4%)
Query: 1 LQTIAFEHCTNHDLFS-LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYG 59
QT + + N + F + +DQ G ++LQ+ L G++ L+ ++ + LM +G
Sbjct: 135 FQTFSPQSFQNPENFPKMCRDQVGCRFLQQQLEEGNTGTLEYIYQQIVPLLDSLMIDPFG 194
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
++ K IE Q II +I D++ + S + +G+ SV+KLI + + +
Sbjct: 195 NYLCQKLIEVVKPDQRVEIIEEIG--DKIHTI-SRNIYGTRSVQKLINSASSKNEVNL-I 250
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEH--CLYLACHEQGCINLN 177
L+ L+ G+ VI +CL+ +N FI+ A LE+ + ++ H+ GC +
Sbjct: 251 RKYLEPYVINLIFDINGNHVIQECLKVFDKPENSFIFDAILENGNLVRVSSHKHGCCVVQ 310
Query: 178 NFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVD 237
IDN + +++ I + +L + GNYVVQ+VL +E + C + + ++
Sbjct: 311 RCIDNGNEEQLSSLVNDIVKYSLALVKDAFGNYVVQYVLGIEGVSVRVTNC--IIENLIE 368
Query: 238 LSLTKCGSFVVQKCLKYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQD 295
LS+ K S V++K + N I E+ L + + D + NYVIQT L ++ +
Sbjct: 369 LSMQKFSSNVIEKLVATGNCKVKEIIFEQFLKFKDVAILLQDSFANYVIQTCLDKSWGEY 428
Query: 296 RLSVHQRLVTKLQQHLAALRVMKY 319
+L RL + H+ ++ Y
Sbjct: 429 KL----RLSNWIIPHVGIIKNTPY 448
>gi|42408517|dbj|BAD09696.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|42409165|dbj|BAD10431.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|215694322|dbj|BAG89315.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1006
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 142/314 (45%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q +
Sbjct: 688 DQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLA 747
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K+ L S+ +G ++K ++V+ L + ++ L +M + G
Sbjct: 748 TKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIELVRELDGNIMRCVRDQNG 799
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E F+ A L+ H GC + +++ G + Q I+ I
Sbjct: 800 NHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEI 859
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A L++ + GNYV QHVL I L G V +S K S V++KC ++
Sbjct: 860 LESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHG 919
Query: 256 NA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ + I+++ +D +L + D+Y NYV+Q L Q R + L+++++
Sbjct: 920 DMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQR----ELLLSRVKG 975
Query: 310 HLAALRVMKYGSNV 323
HL ALR YG ++
Sbjct: 976 HLQALRKYTYGKHI 989
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++N + + + +A+SL GNYV+Q P
Sbjct: 681 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 740
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYI--IEELLNSDQILQVANDKY 279
+ L GH + LSL G V+QK L+ I + EL I++ D+
Sbjct: 741 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVREL--DGNIMRCVRDQN 798
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GN+VIQ + E + + + +V+ + +A+L + YG V
Sbjct: 799 GNHVIQKCI-ECVPTEHIGF---VVSAFRGQVASLSMHPYGCRV 838
>gi|395508974|ref|XP_003758782.1| PREDICTED: pumilio homolog 2 isoform 1 [Sarcophilus harrisii]
Length = 1082
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 143/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E N
Sbjct: 749 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 808
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 809 QKLSLTTRI--RGHVLPLA-LQMYGCRVIQKALESISPDQQNDMVKELDGHVLKCVK--- 862
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 863 -----DQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTVEQ 917
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+L + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 918 TLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNV 977
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + + + D+Y NYV+Q + D
Sbjct: 978 VEKCVSHASRAERALLIDEICCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPG 1031
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR L+ K++ H+ LR YG ++
Sbjct: 1032 QRKVLMHKIRPHVTTLRKYTYGKHI 1056
>gi|431911864|gb|ELK14008.1| Pumilio like protein 2 [Pteropus alecto]
Length = 1056
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 723 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 782
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 783 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 836
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 837 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKAQVFVLSTHPYGCRVIQRILEHCTAEQ 891
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 892 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 951
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 952 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 1010
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 1011 MH-----KIRPHITTLRKYTYGKHI 1030
>gi|115477332|ref|NP_001062262.1| Os08g0519800 [Oryza sativa Japonica Group]
gi|113624231|dbj|BAF24176.1| Os08g0519800 [Oryza sativa Japonica Group]
Length = 1001
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 142/314 (45%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q +
Sbjct: 683 DQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLA 742
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K+ L S+ +G ++K ++V+ L + ++ L +M + G
Sbjct: 743 TKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIELVRELDGNIMRCVRDQNG 794
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E F+ A L+ H GC + +++ G + Q I+ I
Sbjct: 795 NHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEI 854
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A L++ + GNYV QHVL I L G V +S K S V++KC ++
Sbjct: 855 LESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHG 914
Query: 256 NA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ + I+++ +D +L + D+Y NYV+Q L Q R + L+++++
Sbjct: 915 DMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQR----ELLLSRVKG 970
Query: 310 HLAALRVMKYGSNV 323
HL ALR YG ++
Sbjct: 971 HLQALRKYTYGKHI 984
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++N + + + +A+SL GNYV+Q P
Sbjct: 676 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 735
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYI--IEELLNSDQILQVANDKY 279
+ L GH + LSL G V+QK L+ I + EL I++ D+
Sbjct: 736 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVREL--DGNIMRCVRDQN 793
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GN+VIQ + E + + + +V+ + +A+L + YG V
Sbjct: 794 GNHVIQKCI-ECVPTEHIGF---VVSAFRGQVASLSMHPYGCRV 833
>gi|449487299|ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + K+F + LM+ +G +V KF E S
Sbjct: 663 VIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTAS 722
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +++ L S+ +G ++K ++VV +++ L +
Sbjct: 723 QRKELAEQLSGH---VLPLSLQMYGCRVIQKALEVVDSE--QQTQMVAELDGSIMKCVRD 777
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-L 192
+ G+ VI +C+E + FI A L L+ H GC + +++ S +QI +
Sbjct: 778 QNGNHVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSNTQQIIM 837
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + L++ + GNYV+QHVL P I L G V +S K S VV+KCL
Sbjct: 838 DEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKMSQQKFASNVVEKCL 897
Query: 253 KYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ + ++ E+L S ++ LQ + D +GNYV+Q L E+ L + ++++
Sbjct: 898 TFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGNYVVQKVL-ESCDDHSLEL---ILSR 953
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL +L+ YG ++
Sbjct: 954 IRVHLNSLKRYTYGKHI 970
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 8/177 (4%)
Query: 149 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 208
N F ++H + + + G + ++ + +I I +A +L G
Sbjct: 649 NKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFG 708
Query: 209 NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELL 266
NYV+Q + L GH + LSL G V+QK L+ ++ ++ EL
Sbjct: 709 NYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQMVAELD 768
Query: 267 NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
S I++ D+ GN+VIQ + E + Q+R+ Q +++ + AL YG V
Sbjct: 769 GS--IMKCVRDQNGNHVIQKCI-ECIPQERI---QFIISAFYGQVLALSTHPYGCRV 819
>gi|358414521|ref|XP_003582858.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070244|ref|XP_002691562.2| PREDICTED: pumilio homolog 2 isoform 1 [Bos taurus]
Length = 1007
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 146/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 674 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 733
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 734 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 787
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 788 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 842
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 843 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 902
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 903 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 961
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H++ LR YG ++
Sbjct: 962 MH-----KIRPHISTLRKYTYGKHI 981
>gi|348517676|ref|XP_003446359.1| PREDICTED: pumilio homolog 2 isoform 3 [Oreochromis niloticus]
Length = 1076
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 146/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 743 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 802
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 803 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSDIVRELDGHVLKCVK--- 856
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 857 -----DQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQ 911
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + ++ L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 912 TLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNV 971
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + D+Y NYV+Q +AE Q ++
Sbjct: 972 VEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEPA-QRKII 1030
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1031 MH-----KIRPHIATLRKYTYGKHI 1050
>gi|348517674|ref|XP_003446358.1| PREDICTED: pumilio homolog 2 isoform 2 [Oreochromis niloticus]
Length = 1188
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 146/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 855 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 914
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 915 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSDIVRELDGHVLKCVK--- 968
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 969 -----DQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQ 1023
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + ++ L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 1024 TLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNV 1083
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + D+Y NYV+Q +AE Q ++
Sbjct: 1084 VEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEPA-QRKII 1142
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1143 MH-----KIRPHIATLRKYTYGKHI 1162
>gi|430811325|emb|CCJ31248.1| unnamed protein product [Pneumocystis jirovecii]
Length = 995
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 5/193 (2%)
Query: 98 GSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQ 157
G+ +V+K+I+ ++ P + V++AL L+ G+ VI +CL N FI+
Sbjct: 3 GTRAVQKMIEYLS-TPEQIKIVINALNSSVVTLIKDLNGNHVIQKCLNKLSNDDIQFIFD 61
Query: 158 AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLS 217
A +C+ +A H GC L ID+ S++ QI I+ +A +L + GNYVVQ++L
Sbjct: 62 AICSNCIEVATHRHGCCVLQRCIDHASDSQKVQIAKEITNHALNLVQDPFGNYVVQYILD 121
Query: 218 LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAV--HYIIEELLNSDQILQVA 275
L D + + G+ LS+ K S V++KC++ +IEEL +I +
Sbjct: 122 LGDARFSEPLIHRFIGNICLLSVQKFSSNVIEKCIRMAEPPTRSLLIEEL--PKKIGSLI 179
Query: 276 NDKYGNYVIQTAL 288
D Y NYVIQT+L
Sbjct: 180 RDSYANYVIQTSL 192
>gi|356557841|ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 153/320 (47%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E S
Sbjct: 724 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPQALALMTDVFGNYVVQKFFEHGLAS 783
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ F+ L L S+ +G ++K I+VV L + ++ L +M
Sbjct: 784 QRRELANKL-FEHVLTL--SLQMYGCRVIQKAIEVVD-----LDQKIKMVQELDGNIMRC 835
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E +FI + + L+ H GC + +++ K +Q
Sbjct: 836 VRDQNGNHVIQKCIECVPEDAINFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQ 895
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I + L++ + GNYVVQHVL P AI L G V +S K S VV+
Sbjct: 896 KVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVE 955
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L S ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 956 KCLTFGGPSERQLLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 1011
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++++ HL AL+ YG ++
Sbjct: 1012 LSRIKVHLNALKKYTYGKHI 1031
>gi|297845132|ref|XP_002890447.1| hypothetical protein ARALYDRAFT_335400 [Arabidopsis lyrata subsp.
lyrata]
gi|297336289|gb|EFH66706.1| hypothetical protein ARALYDRAFT_335400 [Arabidopsis lyrata subsp.
lyrata]
Length = 343
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 111/205 (54%), Gaps = 5/205 (2%)
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
R F ++ K S V + + K + IY+ L + LY+A + GC+ LN+ I +
Sbjct: 131 RRFLHIITDKYASYVARRGIAVFNKKKKEAIYERILHYALYIARDKHGCLALNDIITDAD 190
Query: 185 G-SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ ++ +I+ A LS GN+V+Q VL L D + I +LRGH+VDLS+ +
Sbjct: 191 DLYYKNKLFDVIAHKAILLSNDAYGNFVIQQVLKLNDLRCKNNIVASLRGHFVDLSIQRY 250
Query: 244 GSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQ-DRLSVHQR 302
GS++V L+ + ++ ++EELL D ++++ + YGN+V+ AL T ++ R ++
Sbjct: 251 GSYIVNLLLETEESMVVVVEELLEGDMLMRLTRNVYGNFVVCKALRVTQKEMVRTDLYWG 310
Query: 303 LVTKLQQHLAALRVMKYGSNVYKWT 327
LV KL+ LR + GSN WT
Sbjct: 311 LVHKLKPFHNPLRRSR-GSN--SWT 332
>gi|224106433|ref|XP_002314164.1| predicted protein [Populus trichocarpa]
gi|222850572|gb|EEE88119.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 151/320 (47%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E S
Sbjct: 678 VVEFSADQYGSRFIQQKLETATTDEKNMVYQEIMPQALALMTDVFGNYVIQKFFEHGLPS 737
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ L S+ +G ++K I+VV L H + ++ L +M
Sbjct: 738 QRRELAGKLLGH---VLTLSLQMYGCRVIQKAIEVVD-----LEHKIKMVEELDGHVMRC 789
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RK 189
+ G+ VI +C+E FI + + L+ H GC + +++ K ++ +
Sbjct: 790 VRDQNGNHVIQKCIECIPEDNIQFIVTTFFDQVVILSTHPYGCRVIQRILEHCKDAKTQS 849
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + L++ + GNYVVQHVL AI L G V +S K S VV+
Sbjct: 850 KVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKFASNVVE 909
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 910 KCLTFSGPSERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 965
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG ++
Sbjct: 966 LTRIKVHLTALKKYTYGKHI 985
>gi|185132391|ref|NP_001117710.1| pumilio-2 [Oncorhynchus mykiss]
gi|90991428|dbj|BAE93116.1| pumilio-2A [Oncorhynchus mykiss]
Length = 1184
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 78/325 (24%), Positives = 146/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 851 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 910
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 911 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSDIVRELDGHVLKCVK--- 964
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 965 -----DQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQ 1019
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + ++ L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 1020 TLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLLLSQHKFASNV 1079
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + D+Y NYV+Q +AE Q ++
Sbjct: 1080 VEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEPA-QRKII 1138
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1139 MH-----KIRPHIATLRKYTYGKHI 1158
>gi|291387144|ref|XP_002710096.1| PREDICTED: pumilio homolog 2-like isoform 3 [Oryctolagus cuniculus]
Length = 1009
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 146/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 735
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 736 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 789
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 790 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 844
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 845 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 904
Query: 248 VQKCLKYQNAVH--YIIEEL-LNSD----QILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ SD + + D+Y NYV+Q +AE Q ++
Sbjct: 905 VEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 963
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 964 MH-----KIRPHITTLRKYTYGKHI 983
Score = 37.7 bits (86), Expect = 7.1, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 100/260 (38%), Gaps = 12/260 (4%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRF 61
Q +A + LA G + +Q+ L S S ++ + G + + Q G
Sbjct: 736 QKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNH 795
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMS 121
V K IE L II F+ Q+F+L S +G ++++++ L ++
Sbjct: 796 VVQKCIECVQPQSLQFII--DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTL--PILE 850
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
L + + L+ + G+ VI LE I L L+ H+ + +
Sbjct: 851 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 910
Query: 182 NMKGSRRKQILHLISVNAA-------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
+ + R ++ + + ++ + + NYVVQ ++ + +P I +R H
Sbjct: 911 HASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPH 970
Query: 235 YVDLSLTKCGSFVVQKCLKY 254
L G ++ K KY
Sbjct: 971 ITTLRKYTYGKHILAKLEKY 990
>gi|449449485|ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 996
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + K+F + LM+ +G +V KF E S
Sbjct: 663 VIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTAS 722
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +++ L S+ +G ++K ++VV +++ L +
Sbjct: 723 QRKELAEQLSGH---VLPLSLQMYGCRVIQKALEVVDSE--QQTQMVAELDGSIMKCVRD 777
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-L 192
+ G+ VI +C+E + FI A L L+ H GC + +++ S +QI +
Sbjct: 778 QNGNHVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSNTQQIIM 837
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + L++ + GNYV+QHVL P I L G V +S K S VV+KCL
Sbjct: 838 DEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKMSQQKFASNVVEKCL 897
Query: 253 KYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ + ++ E+L S ++ LQ + D +GNYV+Q L E+ L + ++++
Sbjct: 898 TFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGNYVVQKVL-ESCDDHSLEL---ILSR 953
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL +L+ YG ++
Sbjct: 954 IRVHLNSLKRYTYGKHI 970
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 8/177 (4%)
Query: 149 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 208
N F ++H + + + G + ++ + +I I +A +L G
Sbjct: 649 NKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFG 708
Query: 209 NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELL 266
NYV+Q + L GH + LSL G V+QK L+ ++ ++ EL
Sbjct: 709 NYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQMVAELD 768
Query: 267 NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
S I++ D+ GN+VIQ + E + Q+R+ Q +++ + AL YG V
Sbjct: 769 GS--IMKCVRDQNGNHVIQKCI-ECIPQERI---QFIISAFYGQVLALSTHPYGCRV 819
>gi|255580219|ref|XP_002530940.1| pumilio, putative [Ricinus communis]
gi|223529499|gb|EEF31455.1| pumilio, putative [Ricinus communis]
Length = 1024
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 150/317 (47%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +K+F + LM+ +G +V KF E ES
Sbjct: 691 VVEFSTDQYGSRFIQQKLEIATAEEKNKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTES 750
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + ++T L S+ +G ++K ++VV +++ L +
Sbjct: 751 QRTELANQLTAH---VLPLSLQMYGCRVIQKALEVVG--VDQQTEMVAELDGSIMKCVRD 805
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-L 192
+ G+ VI +C+E + I + + L+ H GC + +++ + +QI +
Sbjct: 806 QNGNHVIQKCIECVPEDRIQSIISSFYGQVVALSTHPYGCRVIQRVLEHCESIDTQQIIM 865
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + L++ + GNYV+QHVL P AI L G V +S K S VV+KCL
Sbjct: 866 DEIMQSVCVLAQDQYGNYVIQHVLEHGKPHERSAIICKLAGQIVKMSQQKFASNVVEKCL 925
Query: 253 KYQNAVHY--IIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ ++ E+L S ++ LQV D +GNYV+Q L ET L + ++++
Sbjct: 926 IFGGPEERQILVNEMLGSTDENEPLQVMMKDPFGNYVVQKVL-ETCDDRSLEL---ILSR 981
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 982 IKIHLNALKRYTYGKHI 998
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 8/177 (4%)
Query: 149 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 208
N F +EH + + + G + ++ + +I I +A +L G
Sbjct: 677 NKTRSFELSDIVEHVVEFSTDQYGSRFIQQKLEIATAEEKNKIFPEIIPHARTLMTDVFG 736
Query: 209 NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELL 266
NYV+Q + L H + LSL G V+QK L+ ++ EL
Sbjct: 737 NYVIQKFFEHGTESQRTELANQLTAHVLPLSLQMYGCRVIQKALEVVGVDQQTEMVAELD 796
Query: 267 NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
S I++ D+ GN+VIQ + E + +DR+ Q +++ + AL YG V
Sbjct: 797 GS--IMKCVRDQNGNHVIQKCI-ECVPEDRI---QSIISSFYGQVVALSTHPYGCRV 847
>gi|328698838|ref|XP_003240745.1| PREDICTED: pumilio homolog 2-like isoform 2 [Acyrthosiphon pisum]
Length = 1151
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 36/329 (10%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 812 TNH-IVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEF 870
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSAL 123
Q + + K+ L ++ +G ++K ++ V + L HV+ +
Sbjct: 871 GTPEQKSTLAQKVRGH---VLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCV 927
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K + G+ V+ +C+E H FI A L L+ H GC + +++
Sbjct: 928 K--------DQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHC 979
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLS---LEDPFLIDAICFALRGHYVDLSL 240
+ IL + + L + + GNYV+QHVL ED + IC ++RG + LS
Sbjct: 980 TSEQTAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKL--IC-SVRGKVLTLSQ 1036
Query: 241 TKCGSFVVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDR 296
K S VV+KC+ + ++ +IEE+ N + + + D+Y NYV+Q L D
Sbjct: 1037 HKFASNVVEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKML------DV 1090
Query: 297 LSVHQR--LVTKLQQHLAALRVMKYGSNV 323
QR L+ K++ H A+LR YG ++
Sbjct: 1091 CESSQRKVLMHKIRPHFASLRKYTYGKHI 1119
>gi|224098451|ref|XP_002311179.1| predicted protein [Populus trichocarpa]
gi|222850999|gb|EEE88546.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 156/323 (48%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + +F + LM+ +G +V KF E + S
Sbjct: 667 VVEFSADQYGSRFIQQKLETATAEENNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGSAS 726
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALKRLF 127
Q+ + ++T L S+ +G ++K I+VV + L H++ ++
Sbjct: 727 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVVELDQQTKMVTELNGHILRCVR--- 780
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI +C+E FI + + L+ H GC + +++ ++
Sbjct: 781 -----DQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDTK 835
Query: 188 RKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
++I+ I + L++ + GNYVVQHVL P AI L G V +S K S
Sbjct: 836 TQRIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASN 895
Query: 247 VVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVH 300
V++KCL + +++E+L + ++ LQ + D++ NYV+Q L ET +L +
Sbjct: 896 VIEKCLTFGTPAERQALVDEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLGL- 953
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
++++++ HL AL+ YG ++
Sbjct: 954 --ILSRIKVHLNALKKYTYGKHI 974
>gi|328698840|ref|XP_003240746.1| PREDICTED: pumilio homolog 2-like isoform 3 [Acyrthosiphon pisum]
Length = 1116
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 36/329 (10%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 777 TNH-IVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEF 835
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSAL 123
Q + + K+ L ++ +G ++K ++ V + L HV+ +
Sbjct: 836 GTPEQKSTLAQKVRGH---VLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCV 892
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K + G+ V+ +C+E H FI A L L+ H GC + +++
Sbjct: 893 K--------DQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHC 944
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLS---LEDPFLIDAICFALRGHYVDLSL 240
+ IL + + L + + GNYV+QHVL ED + IC ++RG + LS
Sbjct: 945 TSEQTAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKL--IC-SVRGKVLTLSQ 1001
Query: 241 TKCGSFVVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDR 296
K S VV+KC+ + ++ +IEE+ N + + + D+Y NYV+Q L D
Sbjct: 1002 HKFASNVVEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKML------DV 1055
Query: 297 LSVHQR--LVTKLQQHLAALRVMKYGSNV 323
QR L+ K++ H A+LR YG ++
Sbjct: 1056 CESSQRKVLMHKIRPHFASLRKYTYGKHI 1084
>gi|426223188|ref|XP_004005759.1| PREDICTED: pumilio homolog 2 isoform 2 [Ovis aries]
Length = 1007
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 674 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 733
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 734 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 787
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 788 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 842
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 843 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 902
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 903 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 961
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 962 MH-----KIRPHITTLRKYTYGKHI 981
>gi|410955768|ref|XP_003984522.1| PREDICTED: pumilio homolog 2 isoform 3 [Felis catus]
Length = 1007
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 674 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 733
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 734 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 787
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 788 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 842
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 843 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 902
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 903 VEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 961
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 962 MH-----KIRPHITTLRKYTYGKHI 981
>gi|403288169|ref|XP_003935285.1| PREDICTED: pumilio homolog 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1010
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 677 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 736
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 737 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 790
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 791 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 845
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 846 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 905
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 906 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 964
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 965 MH-----KIRPHITTLRKYTYGKHI 984
>gi|332253819|ref|XP_003276029.1| PREDICTED: pumilio homolog 2 isoform 2 [Nomascus leucogenys]
Length = 1009
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 735
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 736 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 789
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 790 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 844
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 845 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 904
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 905 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 963
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 964 MH-----KIRPHITTLRKYTYGKHI 983
>gi|297668111|ref|XP_002812298.1| PREDICTED: pumilio homolog 2 isoform 3 [Pongo abelii]
Length = 1009
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 735
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 736 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 789
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 790 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 844
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 845 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 904
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 905 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 963
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 964 MH-----KIRPHITTLRKYTYGKHI 983
>gi|194385402|dbj|BAG65078.1| unnamed protein product [Homo sapiens]
Length = 1008
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 675 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 734
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 735 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 788
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 789 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 843
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 844 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 903
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 904 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 962
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 963 MH-----KIRPHITTLRKYTYGKHI 982
>gi|332812701|ref|XP_003308953.1| PREDICTED: pumilio homolog 2 [Pan troglodytes]
gi|397513517|ref|XP_003827059.1| PREDICTED: pumilio homolog 2 isoform 2 [Pan paniscus]
gi|426334845|ref|XP_004028947.1| PREDICTED: pumilio homolog 2 isoform 3 [Gorilla gorilla gorilla]
Length = 1009
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 676 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 735
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 736 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 789
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 790 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 844
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 845 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 904
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q +AE Q ++
Sbjct: 905 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPA-QRKII 963
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+ LR YG ++
Sbjct: 964 MH-----KIRPHITTLRKYTYGKHI 983
>gi|357454231|ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP [Medicago truncatula]
gi|355486444|gb|AES67647.1| Pumilio-like protein [Medicago truncatula]
Length = 1047
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 151/320 (47%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ ++ LM+ +G +V KF E S
Sbjct: 717 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFFEHGLAS 776
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ L S+ +G ++K I+VV L + ++ L +M
Sbjct: 777 QRRELANKLYGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVQELDGNIMRC 828
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E DFI + + L+ H GC + +++ + +Q
Sbjct: 829 VRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQ 888
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I + L++ + GNYVVQHVL P I L G+ V +S K S VV+
Sbjct: 889 KVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVE 948
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 949 KCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 1004
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++++ HL AL+ YG ++
Sbjct: 1005 LSRIKVHLNALKKYTYGKHI 1024
>gi|307187049|gb|EFN72338.1| Maternal protein pumilio [Camponotus floridanus]
Length = 787
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 148/321 (46%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 421 NH-IVEFSQDQHGSRFIQQKLERASANEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYG 479
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + + K+ + + LA + +G ++K ++ +A P ++ L
Sbjct: 480 TPEQKSTLAQKV--RGHVLPLA-LQMYGCRVIQKALESIA--PEQQQEIVRELDGHVLKC 534
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E F+ A L+ H GC + +++ + +
Sbjct: 535 VKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQG 594
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + L + + GNYV+QHVL P + ++RG + LS K S VV+K
Sbjct: 595 ILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLIGSVRGKVLALSQHKFASNVVEK 654
Query: 251 CL----KYQNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR-- 302
C+ + + AV +IEE+ N + + + D+Y NYV+Q + D QR
Sbjct: 655 CVTHATRQERAV--LIEEVCGFNDNALNVMMKDQYANYVVQKMI------DVAEPAQRKI 706
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+ K++ HL +LR YG ++
Sbjct: 707 LMHKIRPHLGSLRKYTYGKHI 727
>gi|313231125|emb|CBY19123.1| unnamed protein product [Oikopleura dioica]
Length = 725
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 19/320 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENL---SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFI 67
NH + +QDQ GS+++Q+ L + GD ++ F + ++ L+ +G +V KF+
Sbjct: 398 NH-MVEFSQDQHGSRFIQQKLERCTPGDRELV---FNEILSSSYNLIIDVFGNYVIQKFL 453
Query: 68 ESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
E + Q ++ I L S+ +G ++K ++ +HLP ++ L+
Sbjct: 454 EFGSVEQRVQLLNSIKGH---VLQLSLQMYGCRVIQKGLEAFSHLPEHQIDIVKELEGHV 510
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ V+ + +E + +FI A L+ H GC + +++ +
Sbjct: 511 LKCVKDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTDQ 570
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
QIL I L+ + GNYVVQH+L I +RG V L+ K S V
Sbjct: 571 TAQILDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNV 630
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQIL-QVANDKYGNYVIQTALA-ETMRQDRLSVHQRL 303
++KC+ + +I+E+ S + L + D+Y NYV+Q L M Q R +L
Sbjct: 631 IEKCVTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQKR-----KL 685
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V++++ H+ L+ YG ++
Sbjct: 686 VSQMKPHINNLKRYTYGKHI 705
>gi|357472855|ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
gi|355507767|gb|AES88909.1| Pumilio-like protein [Medicago truncatula]
Length = 1025
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 26/322 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 695 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAP 754
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ L S+ +G ++K I+VV L + +K L +M
Sbjct: 755 QRRELANKLIGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVKELDGNIMRC 806
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E DFI + + L+ H GC + +++ + +Q
Sbjct: 807 VRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQ 866
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 867 KVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVE 926
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQR- 302
KCL + ++ E+L + ++ LQ + D++ NYV+Q L + HQR
Sbjct: 927 KCLTFSGPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVL------ETCDDHQRE 980
Query: 303 -LVTKLQQHLAALRVMKYGSNV 323
++++++ HL AL+ YG ++
Sbjct: 981 LILSRIKVHLNALKKYTYGKHI 1002
>gi|6056191|gb|AAF02808.1|AC009400_4 putative RNA binding protein [Arabidopsis thaliana]
Length = 1031
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F + + LM+ +G +V KF E
Sbjct: 669 VIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTK 728
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + ++T L S+ +G ++K ++VV L +K L +M
Sbjct: 729 QRKELAEQVTGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKC 780
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRK 189
+ G+ VI +C+E FI + L L+ H GC + ++++ ++
Sbjct: 781 VHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQR 840
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I + +L++ + GNYV+QH++ P I L G V +S K S VV+
Sbjct: 841 IIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVE 900
Query: 250 KCLKYQNAVHY--IIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D +GNYV+Q L ET L++ +
Sbjct: 901 KCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL---I 956
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++++ HL AL+ YG ++
Sbjct: 957 LSRIKVHLNALKRYTYGKHI 976
>gi|297826303|ref|XP_002881034.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
gi|297326873|gb|EFH57293.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 636 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFGNYVIQKFFEHGLPP 695
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ F + L L S+ +G ++K I+VV L + +K L +M
Sbjct: 696 QRRELAEKL-FDNVLPL--SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 747
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRK 189
+ G+ V+ +C+E +FI H + L+ H GC + +++ +
Sbjct: 748 VRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQS 807
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 808 KVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVE 867
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 868 KCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 923
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG +V
Sbjct: 924 LTRIKVHLNALKKYTYGKHV 943
>gi|225443381|ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|297735758|emb|CBI18445.3| unnamed protein product [Vitis vinifera]
Length = 1053
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 146/313 (46%), Gaps = 20/313 (6%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +F V LM+ +G +V KF E Q +
Sbjct: 708 DQHGSRFIQQKLENCSGEEKASVFKEVLPHASRLMTDVFGNYVIQKFFEHGTPEQRRELA 767
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVA--HLPPLLYHVMSALKRLFKFLMMTKPGS 137
++ Q + S+ +G ++K ++V+ L++ + + R + + G+
Sbjct: 768 YQLAGQ---MIPLSLQMYGCRVIQKALEVIELDQKTQLVHELDGHVIRCVR----DQNGN 820
Query: 138 SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLIS 196
VI +C+E K FI A L+ H GC + +++ + Q I+ I
Sbjct: 821 HVIQKCIECIPTEKIGFIISAFKGQVTVLSSHPYGCRVIQRVLEHCSEVSQSQFIVDEIL 880
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
+A L+ + GNYV QHVL +P I L G V +S K S V++KCL+Y +
Sbjct: 881 ESAYVLAEDQYGNYVTQHVLERGNPHERSQIISKLTGKIVQMSQHKYASNVIEKCLEYGS 940
Query: 257 AV--HYIIEELL----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+IEE++ ++D +L + D++ NYV+Q L + + R + L+ +++ H
Sbjct: 941 TSECELLIEEIIGQSEDNDNLLVMMKDQFANYVVQKILETSNDKQR----EILLNRIRVH 996
Query: 311 LAALRVMKYGSNV 323
L AL+ YG ++
Sbjct: 997 LNALKKYTYGKHI 1009
>gi|158828184|gb|ABW81063.1| Mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 636 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFGNYVIQKFFEHGLPP 695
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ F + L L S+ +G ++K I+VV L + +K L +M
Sbjct: 696 QRRELAEKL-FDNVLPL--SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 747
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRK 189
+ G+ V+ +C+E +FI H + L+ H GC + +++ +
Sbjct: 748 VRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQS 807
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 808 KVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVE 867
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 868 KCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 923
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG +V
Sbjct: 924 LTRIKVHLNALKKYTYGKHV 943
>gi|255566432|ref|XP_002524201.1| pumilio, putative [Ricinus communis]
gi|223536478|gb|EEF38125.1| pumilio, putative [Ricinus communis]
Length = 999
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 154/323 (47%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + +F + LM+ +G +V KF E + +
Sbjct: 668 VVEFSADQYGSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFGNYVIQKFFEHGSAA 727
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALKRLF 127
Q+ + ++T L S+ +G ++K I+VV + L H+M ++
Sbjct: 728 QIRELADQLTGH---VLTLSLQMYGCRVIQKAIEVVELDQQTKMVAELDGHIMRCVR--- 781
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI +C+E FI + + L+ H GC + +++ ++
Sbjct: 782 -----DQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDAK 836
Query: 188 RKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
++I+ I + L++ + GNYVVQHVL P +I L G V +S K S
Sbjct: 837 TQRIMMDEILQSVLMLAQDQYGNYVVQHVLEHGKPHERSSIIKKLTGQIVQMSQQKFASN 896
Query: 247 VVQKCLKYQNAVHY--IIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRLSVH 300
V++KCL + ++ E+L + ++ LQV D++ NYV+Q L ET +L +
Sbjct: 897 VIEKCLTFGTPAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL-ETCDDQQLEL- 954
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
++ +++ HL AL+ YG ++
Sbjct: 955 --ILNRIKVHLNALKKYTYGKHI 975
>gi|158828235|gb|ABW81112.1| putative pumilio Mpt5-2 [Boechera divaricarpa]
Length = 967
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 634 VVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 693
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ F + L L S+ +G ++K I+VV L + +K L +M
Sbjct: 694 QRRELAEKL-FDNVLPL--SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 745
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRK 189
+ G+ V+ +C+E +FI H + L+ H GC + +++ +
Sbjct: 746 VRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQS 805
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 806 KVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVE 865
Query: 250 KCLKYQNAVHY--IIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 866 KCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 921
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG +V
Sbjct: 922 LTRIKVHLNALKKYTYGKHV 941
>gi|358377871|gb|EHK15554.1| hypothetical protein TRIVIDRAFT_165243 [Trichoderma virens Gv29-8]
Length = 308
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 16/278 (5%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L S +S +++F + +LM +G +V KF E SQL I
Sbjct: 35 DQHGSRFIQQKLESANSDEKEQVFREIEPNALQLMKDVFGNYVVQKFFEYG--SQLQKKI 92
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLMMTKPGS 137
L + ++ L SV + V+K ++ +V L + + R+ K + G+
Sbjct: 93 LAEKMKGKVVDL-SVQVYACRVVQKALEHILVEQQAELTRELEPEILRVIK----DQNGN 147
Query: 138 SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 197
V+ + +E DFI A LA H GC + +++ + + +I+ +
Sbjct: 148 HVVQKIIELVPRQYIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGELHA 207
Query: 198 NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN- 256
+A L + GNYV QHV+ +P + I + G + LS K S VV+KC++Y
Sbjct: 208 SAQILITDQYGNYVAQHVIQNGEPEDRERIIQLVMGQLLTLSKHKFASNVVEKCIEYGTP 267
Query: 257 AVHYIIEELLNS------DQILQVANDKYGNYVIQTAL 288
A I E L + + + Q+ D++GNYVI+ +L
Sbjct: 268 AQRTTIREQLTTTGADGNNPLQQMMRDQFGNYVIRKSL 305
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 188 RKQILHLISVNAASLSRH-----------RSGNYVVQHVLSLEDPFLIDAICFALRGHYV 236
+K + H++ A L+R ++GN+VVQ ++ L ID I A+RG
Sbjct: 115 QKALEHILVEQQAELTRELEPEILRVIKDQNGNHVVQKIIELVPRQYIDFIMNAVRGQVT 174
Query: 237 DLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQ 294
L+ G V+Q+ L++ I+ EL S QIL D+YGNYV Q + +
Sbjct: 175 PLASHAYGCRVIQRLLEHGTEADKAEIMGELHASAQIL--ITDQYGNYVAQHVIQNGEPE 232
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
DR +R++ + L L K+ SNV
Sbjct: 233 DR----ERIIQLVMGQLLTLSKHKFASNV 257
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + +++ ++Q+ I NA L + GNYVVQ
Sbjct: 28 HAVEFSGDQHGSRFIQQKLESANSDEKEQVFREIEPNALQLMKDVFGNYVVQKFFEYGSQ 87
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLN-----SDQILQVAN 276
+ ++G VDLS+ VVQK L+ H ++E+ +IL+V
Sbjct: 88 LQKKILAEKMKGKVVDLSVQVYACRVVQKALE-----HILVEQQAELTRELEPEILRVIK 142
Query: 277 DKYGNYVIQTALAETMRQ 294
D+ GN+V+Q + RQ
Sbjct: 143 DQNGNHVVQKIIELVPRQ 160
>gi|253741511|gb|EES98380.1| Pumilio-family RNA-binding protein, putative [Giardia intestinalis
ATCC 50581]
Length = 652
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 17/272 (6%)
Query: 50 TFELMSG----QYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKL 105
T LM G G + F K IE + +Q I+L I QD LF + + G+ S++KL
Sbjct: 361 TPSLMEGLLIHPAGNYCFQKIIEGSDATQRLRILLLI--QDSLFDICH-NLHGTRSIQKL 417
Query: 106 IKVVA--HLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHC 163
++ V+ + + R+ K +M G+ + +C+E FIY +
Sbjct: 418 LERVSLDEEKAIFAQQLGTGDRIIKLIMDIN-GNHCVQRCIEAFSPKDCAFIYSQIVREL 476
Query: 164 LYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVL-----SL 218
+ ++ H+ GC + +D ++R QI+ I + L R GNYV Q+ L L
Sbjct: 477 VLVSTHQHGCCIIQRCLDLCSEAQRVQIVTAIKDHVMELIVDRFGNYVFQYSLEKASNGL 536
Query: 219 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVAN 276
P D + + G L K S ++KCLKY + I E ++ S L +A
Sbjct: 537 CGPITTDDLIRPVLGQEAFLVNQKFSSHAIEKCLKYGSKKMRALITENVMASGSFLSLAM 596
Query: 277 DKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
DK+GNYVIQ A + + + + QR++ +
Sbjct: 597 DKFGNYVIQKAFCDATDEQKKIISQRVLASPE 628
>gi|238494168|ref|XP_002378320.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
gi|220694970|gb|EED51313.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
Length = 550
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 25/324 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S +++F + G + +LM+ +G +V K E
Sbjct: 138 NH-VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHG 196
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N++Q ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 197 NQTQKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHV 248
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E + F+ A + LA H GC + +++ K
Sbjct: 249 LRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEED 308
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVL-SLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
R+ IL + V A L + GNYV+QHV+ + ED + + + + S K S
Sbjct: 309 REAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVM-SNLLTYSKHKFASN 367
Query: 247 VVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSV 299
VV+K +++ ++ H II L ++D +L + D++GNYVIQ L + +R +
Sbjct: 368 VVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA- 426
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
LV +++ L+ L+ YG +
Sbjct: 427 ---LVEEIKPLLSQLKKYSYGKQI 447
>gi|348513123|ref|XP_003444092.1| PREDICTED: pumilio homolog 1-like [Oreochromis niloticus]
Length = 1163
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 75/319 (23%), Positives = 146/319 (45%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L S +F + ++LM +G +V KF E +
Sbjct: 828 IMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 887
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 888 QKLALAERI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 944
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E H FI +A L+ H GC + +++ + IL
Sbjct: 945 QNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILE 1004
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL I +RG+ + LS K S VV+KC+
Sbjct: 1005 ELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVT 1064
Query: 254 YQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + + + + D+Y NYV+Q + AE Q ++ +H
Sbjct: 1065 HASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPT-QRKIVMH---- 1119
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H++ LR YG ++
Sbjct: 1120 -KIRPHISTLRKYTYGKHI 1137
Score = 39.7 bits (91), Expect = 2.2, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D +++ ++ + G + + Q G
Sbjct: 888 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNG 947
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 948 NHVVQKCIECVQPHALHFIIE--AFKGQVFAL-STHPYGCRVIQRILEHC--LPEQTLPI 1002
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 1003 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1062
Query: 180 IDNMKGSRRKQIL-HLISVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + S+ ++ + + NYVVQ ++ + +P + +R
Sbjct: 1063 VTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIR 1122
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 1123 PHISTLRKYTYGKHILAKLEKY 1144
>gi|300175939|emb|CBK21935.2| unnamed protein product [Blastocystis hominis]
Length = 544
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +A++ G + LQ+ L + + ++F + ELM+ +G +VF ++ C+E
Sbjct: 224 VVDMAKNYNGCRALQQILLTASPAAVTEIFEELQSSLRELMTDPFGNYVFQMLLQVCSEE 283
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ A I+ + + AS++ G+ V+ L++ + P ++ + +AL+ L
Sbjct: 284 RRAQILSAVR---DFVIDASLNIHGTRCVQSLVQYCSS-PSMIDSLFAALQGHIAHLAAH 339
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VIL+CL+ +++ ++HC+ +A H GC + F R ++++
Sbjct: 340 PNGNHVILRCLQSIPESFCTPLFEELVQHCIDIATHRHGCCVIQQFFLRAPPLYRNRLMN 399
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--C 251
I A L + GNYVVQ VL P + + ++ GH V+ S K S V++K
Sbjct: 400 AILHEAHLLITNPFGNYVVQFVLERGRPEERELLTRSVFGHVVEYSCQKYSSNVIEKVIV 459
Query: 252 LKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQT 286
L + + II E++ S + + + NY+IQ
Sbjct: 460 LADEQVRYQIICEIVGSPHFPAILHHNFANYIIQN 494
>gi|307210859|gb|EFN87212.1| Maternal protein pumilio [Harpegnathos saltator]
Length = 627
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 18/319 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 266 NH-IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYG 324
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + + K+ + + LA + +G ++K ++ + P ++ L
Sbjct: 325 TPEQKSTLAQKV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKC 379
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E F+ A L+ H GC + +++ + +
Sbjct: 380 VKDQNGNHVVQKCIECVEPRALQFVIGAFTGQVFALSTHPYGCRVIQRILEHCTPEQTQG 439
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P + ++RG + LS K S VV+K
Sbjct: 440 ILQELHASTDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEK 499
Query: 251 CLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
C+ + + +IEE+ N + + + D+Y NYV+Q + D QR L+
Sbjct: 500 CVTHATRQERAILIEEVCGFNDNALNVMMKDQYANYVVQKMI------DVAEPAQRKVLM 553
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ HL +LR YG ++
Sbjct: 554 HKIRPHLGSLRKYTYGKHI 572
>gi|158578543|gb|ABW74568.1| Mpt5 [Boechera divaricarpa]
Length = 970
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 637 VVEFSSDQYGSRFIQQKLETATADEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 696
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ D + L S+ +G ++K I+VV L + +K L +M
Sbjct: 697 QRRELAEKLI--DNVLPL-SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 748
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRK 189
+ G+ V+ +C+E +FI H + L+ H GC + +++ ++
Sbjct: 749 VRDQNGNHVVQKCIECVPEDNIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQR 808
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 809 KVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVE 868
Query: 250 KCLKYQNAVHY--IIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 869 KCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 924
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG ++
Sbjct: 925 LTRIKVHLNALKKYTYGKHI 944
>gi|332017050|gb|EGI57849.1| Maternal protein pumilio [Acromyrmex echinatior]
Length = 630
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 148/321 (46%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 266 NH-IVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYG 324
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+ Q + + K+ + + LA + +G ++K ++ + P ++ L
Sbjct: 325 TQEQKSTLAQKV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKC 379
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E F+ A L+ H GC + +++ + +
Sbjct: 380 VKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQG 439
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + L + + GNYV+QHVL P + ++RG + LS K S VV+K
Sbjct: 440 ILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEK 499
Query: 251 CL----KYQNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR-- 302
C+ + + AV +IEE+ N + + + D+Y NYV+Q + D QR
Sbjct: 500 CVTHATRQERAV--LIEEVCGFNDNALNVMMKDQYANYVVQKMI------DVAEPAQRKV 551
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+ K++ HL +LR YG ++
Sbjct: 552 LMHKIRPHLGSLRKYTYGKHI 572
>gi|302142233|emb|CBI19436.3| unnamed protein product [Vitis vinifera]
Length = 167
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 154 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 213
++ + E+C +A + GC L + ++N +G R+Q++ I NA L+ R GNYVVQ
Sbjct: 12 YLIKEVAENCFEIATNRSGCCVLQSCVENSQGELREQLMAEIIANALPLAEDRYGNYVVQ 71
Query: 214 HVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL---KYQNAVHYIIEELLNSDQ 270
H++ L+ P +I + G ++ LS K GS VV+K L K + + II ELL S
Sbjct: 72 HLMGLKIPEVITNLLKQFEGTFISLSCNKYGSNVVEKFLIESKDEQSSQIII-ELLRSPN 130
Query: 271 ILQVANDKYGNYVIQTALA 289
+ + D +GN+VIQ+AL+
Sbjct: 131 VSMLLLDPFGNFVIQSALS 149
>gi|22330960|ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana]
gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio homolog 4; Short=APUM-4; Short=AtPUM4
gi|332641375|gb|AEE74896.1| protein pumilio 4 [Arabidopsis thaliana]
Length = 1003
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F + + LM+ +G +V KF E
Sbjct: 669 VIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTK 728
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + ++T L S+ +G ++K ++VV L +K L +M
Sbjct: 729 QRKELAEQVTGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKC 780
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRK 189
+ G+ VI +C+E FI + L L+ H GC + ++++ ++
Sbjct: 781 VHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQR 840
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I + +L++ + GNYV+QH++ P I L G V +S K S VV+
Sbjct: 841 IIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVE 900
Query: 250 KCLKYQNAVHY--IIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D +GNYV+Q L ET L++ +
Sbjct: 901 KCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL---I 956
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++++ HL AL+ YG ++
Sbjct: 957 LSRIKVHLNALKRYTYGKHI 976
>gi|256082282|ref|XP_002577387.1| pumilio [Schistosoma mansoni]
gi|350645489|emb|CCD59841.1| pumilio, putative [Schistosoma mansoni]
Length = 1501
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 82/336 (24%), Positives = 150/336 (44%), Gaps = 40/336 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A+DQ GS+++Q+ L + + + +F + + +LM+ +G +V KF E +
Sbjct: 1050 MVEFARDQHGSRFIQQKLETATTAEKNSVFNEILPHSGKLMTDVFGNYVIQKFFEFGTKE 1109
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q L+ ++ Q + A+ +G ++K ++ V + H++ L+ +
Sbjct: 1110 QKELLSQRL--QGHVVEFAT-QMYGCRVIQKALESVPAEAKI--HIVGELRPFVTRCVKD 1164
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +C+E + DFI A + L+ H GC + +++ + + IL
Sbjct: 1165 QNGNHVIQKCIECVPPSELDFIISAFRGQVVLLSSHPYGCRVIQRILEHCLPEQTRPILD 1224
Query: 194 LISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+ L + + GNYV+QHVL S ED I LRG LS K S V++K
Sbjct: 1225 ELHKGVEHLVKDQYGNYVIQHVLEHGSNEDK---SRIIQNLRGRVCALSSHKFASNVMEK 1281
Query: 251 CLKYQNAV----HYIIEELLN-------------------SDQILQVANDKYGNYVIQTA 287
+ NAV +IEE+L+ S ++ + D+Y NYV+Q
Sbjct: 1282 AIA--NAVPSERAVLIEEILHPISNVNINGDTSSVTTNNISSSLVDMMKDQYANYVVQRM 1339
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L + R + L+ +++ LR YG ++
Sbjct: 1340 LELADTEQR----RVLINRIRPMQNVLRKFNYGKHI 1371
>gi|356530316|ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 985
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 24/321 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L S +F V +LM+ +G +V KF E +
Sbjct: 662 IVEFSSDQHGSRFIQQKLESCSVEEKTLVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPE 721
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--HLPPLLYHVMSALKRLFKFLM 131
Q + ++ Q L S+ +G ++K ++V+ L++ + + R +
Sbjct: 722 QRRELADRLVGQ---ILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVR--- 775
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ- 190
+ G+ VI +C+E K FI A L+ H GC + +++ + Q
Sbjct: 776 -DQNGNHVIQKCIESIPTKKISFILSAFRGQVATLSMHPYGCRVMQRVLEHCTDESQCQF 834
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
I+ I + +L++ + GNYV QHVL P I L GH V LS K S VV+K
Sbjct: 835 IVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIINKLSGHIVQLSQHKFASNVVEK 894
Query: 251 CLKYQNAVHY--IIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQR-- 302
CL+Y + ++ E+ D+ +L + D++ NYV+Q + D S +QR
Sbjct: 895 CLEYGDTTERELLVAEIFGHDEKCDNLLTMMKDQFANYVVQKVI------DICSENQRAM 948
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L++ ++ H AL+ YG ++
Sbjct: 949 LLSHVRIHAHALKKYTYGKHI 969
>gi|147775244|emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 149/317 (47%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E S
Sbjct: 709 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVS 768
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + K+ L S+ +G ++K I+VV P ++ L +
Sbjct: 769 QRRELAGKLYGH---VLTLSLQMYGCRVIQKAIEVVD--PDQKIKMVEELDGHIMRCVRD 823
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQIL 192
+ G+ VI +C+E FI + + L+ H GC + +++ + + + +++
Sbjct: 824 QNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKTQSKVM 883
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + + L++ + GNYVVQHVL P AI L G V +S K S VV+KCL
Sbjct: 884 DEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNVVEKCL 943
Query: 253 KYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ ++ E+L + ++ LQ + D++ NYV+Q L Q R + ++++
Sbjct: 944 TFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSR 999
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 1000 IKVHLNALKKYTYGKHI 1016
>gi|79609613|ref|NP_974618.2| pumilio 6 protein [Arabidopsis thaliana]
gi|332659728|gb|AEE85128.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 855
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 24/313 (7%)
Query: 22 EGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILK 81
E S+++Q+ L + +F + +LM+ +G +V KF E N +Q + +
Sbjct: 539 EFSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQ 598
Query: 82 ITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVIL 141
+ Q + S+ +G ++K + V+ P + L + + G+ VI
Sbjct: 599 LMGQ---IVPLSLQMYGCRVIQKALDVIE--PDQRVRLARELDGQVMRCVRDQNGNHVIQ 653
Query: 142 QCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR-----KQILHLIS 196
+C+E K F+ A L+ H GC + ++ + ++IL +
Sbjct: 654 KCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVC 713
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
V LS+ + GNYV QHVL + I L GH V LSL K S V++KCL+Y
Sbjct: 714 V----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGG 769
Query: 257 AVHY--IIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
V II+E+ D+ +L + D+YGNYV+Q RL+ L ++++ H
Sbjct: 770 RVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT----LFSRVRMH 825
Query: 311 LAALRVMKYGSNV 323
+AL+ YG ++
Sbjct: 826 ASALKKYTYGKHI 838
>gi|297822641|ref|XP_002879203.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
gi|297325042|gb|EFH55462.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 973
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 640 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 699
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ D + L S+ +G ++K I+VV L + +K L +M
Sbjct: 700 QRRELGEKLI--DNVLPL-SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 751
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRK 189
+ G+ V+ +C+E +FI H + L+ H GC + +++ +
Sbjct: 752 VRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQS 811
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 812 KVMEEILITVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVE 871
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 872 KCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 927
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG ++
Sbjct: 928 LTRIKVHLNALKKYTYGKHI 947
>gi|256082284|ref|XP_002577388.1| pumilio [Schistosoma mansoni]
gi|350645490|emb|CCD59842.1| pumilio, putative [Schistosoma mansoni]
Length = 1309
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 82/336 (24%), Positives = 150/336 (44%), Gaps = 40/336 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A+DQ GS+++Q+ L + + + +F + + +LM+ +G +V KF E +
Sbjct: 943 MVEFARDQHGSRFIQQKLETATTAEKNSVFNEILPHSGKLMTDVFGNYVIQKFFEFGTKE 1002
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q L+ ++ Q + A+ +G ++K ++ V + H++ L+ +
Sbjct: 1003 QKELLSQRL--QGHVVEFAT-QMYGCRVIQKALESVPAEAKI--HIVGELRPFVTRCVKD 1057
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +C+E + DFI A + L+ H GC + +++ + + IL
Sbjct: 1058 QNGNHVIQKCIECVPPSELDFIISAFRGQVVLLSSHPYGCRVIQRILEHCLPEQTRPILD 1117
Query: 194 LISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+ L + + GNYV+QHVL S ED I LRG LS K S V++K
Sbjct: 1118 ELHKGVEHLVKDQYGNYVIQHVLEHGSNEDK---SRIIQNLRGRVCALSSHKFASNVMEK 1174
Query: 251 CLKYQNAV----HYIIEELLN-------------------SDQILQVANDKYGNYVIQTA 287
+ NAV +IEE+L+ S ++ + D+Y NYV+Q
Sbjct: 1175 AIA--NAVPSERAVLIEEILHPISNVNINGDTSSVTTNNISSSLVDMMKDQYANYVVQRM 1232
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L + R + L+ +++ LR YG ++
Sbjct: 1233 LELADTEQR----RVLINRIRPMQNVLRKFNYGKHI 1264
>gi|452821243|gb|EME28276.1| serine rich Pumilio family RNA binding domain pr otein [Galdieria
sulphuraria]
Length = 471
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 7/209 (3%)
Query: 118 HVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLN 177
++ S L + KFL G+ VI C + N F+Y E+ L LA H QGC +
Sbjct: 254 YLQSILSSVAKFLFKDVNGAHVIQHCFLYWSSEDNQFLYHTIQENFLELATHRQGCCMIQ 313
Query: 178 NFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVD 237
+D S+ I I + L GNYVVQH+L ++P I I L+GH+ +
Sbjct: 314 TSMDFACSSQLDDIATNIIQHIFVLIHDAFGNYVVQHILDSKNPRYIHDIMKKLQGHWYE 373
Query: 238 LSLTKCGSFVVQKCLKYQNAVHY--IIEELLNS-DQILQVANDKYGNYVIQTALAETMRQ 294
+S+ K S + +KCL+ A +IEEL I + +D YGNYVIQ L +
Sbjct: 374 MSMEKFSSNITEKCLQLAEATQRWEMIEELAQECSNIGNLLHDAYGNYVIQRMLQVASQP 433
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ +L ++++ L +YG +
Sbjct: 434 QKI----QLKECIEKYWNTLSRSRYGKQI 458
>gi|79325269|ref|NP_001031720.1| pumilio 6 protein [Arabidopsis thaliana]
gi|332659729|gb|AEE85129.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 858
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 24/313 (7%)
Query: 22 EGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILK 81
E S+++Q+ L + +F + +LM+ +G +V KF E N +Q + +
Sbjct: 539 EFSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQ 598
Query: 82 ITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVIL 141
+ Q + S+ +G ++K + V+ P + L + + G+ VI
Sbjct: 599 LMGQ---IVPLSLQMYGCRVIQKALDVIE--PDQRVRLARELDGQVMRCVRDQNGNHVIQ 653
Query: 142 QCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR-----KQILHLIS 196
+C+E K F+ A L+ H GC + ++ + ++IL +
Sbjct: 654 KCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVC 713
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
V LS+ + GNYV QHVL + I L GH V LSL K S V++KCL+Y
Sbjct: 714 V----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGG 769
Query: 257 AVHY--IIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
V II+E+ D+ +L + D+YGNYV+Q RL+ L ++++ H
Sbjct: 770 RVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT----LFSRVRMH 825
Query: 311 LAALRVMKYGSNV 323
+AL+ YG ++
Sbjct: 826 ASALKKYTYGKHI 838
>gi|90074793|dbj|BAD95609.2| pumilio-1 [Oncorhynchus mykiss]
Length = 1159
Score = 84.7 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 75/319 (23%), Positives = 145/319 (45%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L S +F + ++LM +G +V KF E +
Sbjct: 824 IMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 883
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 884 QKLALAERI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 940
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E H FI A L+ H GC + +++ + IL
Sbjct: 941 QNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1000
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL I +RG+ + LS K S VV+KC+
Sbjct: 1001 ELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVS 1060
Query: 254 YQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + + + + D+Y NYV+Q + AE Q ++ +H
Sbjct: 1061 HASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPT-QRKIVMH---- 1115
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H++ LR YG ++
Sbjct: 1116 -KIRPHISTLRKYTYGKHI 1133
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D +++ ++ + G + + Q G
Sbjct: 884 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNG 943
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 944 NHVVQKCIECVQPHALHFII--DAFKGQVFAL-STHPYGCRVIQRILEHC--LPDQTLPI 998
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 999 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1058
Query: 180 IDNMKGSRRKQIL-HLISVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + S+ ++ + + NYVVQ ++ + +P + +R
Sbjct: 1059 VSHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIR 1118
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 1119 PHISTLRKYTYGKHILAKLEKY 1140
>gi|15220239|ref|NP_174820.1| protein pumilio 17 [Arabidopsis thaliana]
gi|12322098|gb|AAG51092.1|AC027032_12 RNA-binding protein, putative [Arabidopsis thaliana]
gi|332193710|gb|AEE31831.1| protein pumilio 17 [Arabidopsis thaliana]
Length = 304
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
A+ RLF +M+ K S V +Q + K + +Y L + L+LA + GCI LN I
Sbjct: 89 AIMRLFIHVMIDKYASYVAIQGMRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIK 148
Query: 182 NMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
+ R +++ ++S NA LS GN+VVQHVL L D I L G+ V+LS
Sbjct: 149 ELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSF 208
Query: 241 TKCGSFVVQKCLKYQN-AVHYIIEELL--NSDQILQVANDKYGNYV----------IQTA 287
K GS++V++ L+ ++ + I+ +LL ++ ++++A + GN+V I TA
Sbjct: 209 KKYGSYIVERLLEVRDIPMATIVLDLLACKTEMLIRLARSENGNFVVCKLLELTNDILTA 268
Query: 288 -----LAETMRQDRLSVHQRLVTKLQQHLAALRV 316
L +R R +H+ +K+ L ++RV
Sbjct: 269 DLFYSLVNKLRPYRFLLHRFPESKIVAILGSMRV 302
>gi|15227052|ref|NP_180483.1| pumilio 1 [Arabidopsis thaliana]
gi|75217076|sp|Q9ZW07.1|PUM1_ARATH RecName: Full=Pumilio homolog 1; Short=APUM-1; Short=AtPUM1
gi|3980412|gb|AAC95215.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253128|gb|AEC08222.1| pumilio 1 [Arabidopsis thaliana]
Length = 968
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 149/323 (46%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 635 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEH---- 690
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
L + ++LF L S+ +G ++K I+VV L + +K L +
Sbjct: 691 --GLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 743
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGS 186
M + G+ V+ +C+E +FI H + L+ H GC + +++
Sbjct: 744 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPD 803
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ +++ I + L++ + GNYVVQHVL P I L G V +S K S
Sbjct: 804 TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 863
Query: 247 VVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVH 300
VV+KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R
Sbjct: 864 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR---- 919
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL AL+ YG +V
Sbjct: 920 ELILTRIKVHLTALKKYTYGKHV 942
>gi|410910802|ref|XP_003968879.1| PREDICTED: pumilio homolog 1-like [Takifugu rubripes]
Length = 1162
Score = 84.7 bits (208), Expect = 6e-14, Method: Composition-based stats.
Identities = 75/319 (23%), Positives = 145/319 (45%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L S +F + ++LM +G +V KF E +
Sbjct: 827 IMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 886
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 887 QKLALAERI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 943
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E H FI A L+ H GC + +++ + IL
Sbjct: 944 QNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILE 1003
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL I +RG+ + LS K S VV+KC+
Sbjct: 1004 ELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVT 1063
Query: 254 YQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + + + + D+Y NYV+Q + AE Q ++ +H
Sbjct: 1064 HASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPT-QRKIVMH---- 1118
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H++ LR YG ++
Sbjct: 1119 -KIRPHISTLRKYTYGKHI 1136
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D +++ ++ + G + + Q G
Sbjct: 887 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNG 946
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 947 NHVVQKCIECVQPHALHFII--DAFKGQVFAL-STHPYGCRVIQRILEHC--LPEQTLPI 1001
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 1002 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1061
Query: 180 IDNMKGSRRKQIL-HLISVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + S+ ++ + + NYVVQ ++ + +P + +R
Sbjct: 1062 VTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIR 1121
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 1122 PHISTLRKYTYGKHILAKLEKY 1143
>gi|225434877|ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 149/317 (47%), Gaps = 16/317 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E S
Sbjct: 735 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVS 794
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + K+ L S+ +G ++K I+VV P ++ L +
Sbjct: 795 QRRELAGKLYGH---VLTLSLQMYGCRVIQKAIEVVD--PDQKIKMVEELDGHIMRCVRD 849
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQIL 192
+ G+ VI +C+E FI + + L+ H GC + +++ + + + +++
Sbjct: 850 QNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKTQSKVM 909
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + + L++ + GNYVVQHVL P AI L G V +S K S VV+KCL
Sbjct: 910 DEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNVVEKCL 969
Query: 253 KYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ ++ E+L + ++ LQ + D++ NYV+Q L Q R + ++++
Sbjct: 970 TFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSR 1025
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 1026 IKVHLNALKKYTYGKHI 1042
>gi|242063522|ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
gi|241932881|gb|EES06026.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
Length = 998
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 149/319 (46%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F + LM+ +G +V KF E E+
Sbjct: 670 VVEFSSDQYGSRFIQQKLETASIEEKNMIFPEILPQARTLMTDVFGNYVIQKFFEYGTET 729
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL--M 131
Q + T L S+ +G ++K ++VV + AL+ + +
Sbjct: 730 QTKQLA---TLLKGYVLQLSLQMYGCRVIQKALEVVE----VEQQTQMALELDGSIMRCV 782
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQ 190
+ G+ VI +C+E + FI A H + L+ H GC + +++ S +
Sbjct: 783 RDQNGNHVIQKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRVLEHCDDESTQNA 842
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I + +L+ + GNYV+QHVL P I L G V +S K S VV+K
Sbjct: 843 MMEEIMQSVVTLTEDQYGNYVIQHVLQHGKPEERSTIITQLAGQIVKMSQQKFASNVVEK 902
Query: 251 CLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
CL + N +I E+L + ++ LQ + D++ NYV+Q L Q+R + ++
Sbjct: 903 CLTFGNPEQRQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLEICDDQNR----ELIL 958
Query: 305 TKLQQHLAALRVMKYGSNV 323
++++ HL AL+ YG ++
Sbjct: 959 SRIKVHLNALKRYTYGKHI 977
>gi|189242503|ref|XP_967865.2| PREDICTED: similar to pumilio [Tribolium castaneum]
Length = 718
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 32/326 (9%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 379 NH-IVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEFG 437
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---------LLYHVMS 121
Q + K+ + + LA + +G ++K ++ + PP L HV+
Sbjct: 438 TAEQKTTLAQKV--RGHVLPLA-LQMYGCRVIQKALESI---PPEQQQEIVRELDGHVLK 491
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
+K + G+ V+ +C+E + FI Q+ L+ H GC + ++
Sbjct: 492 CVK--------DQNGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILE 543
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ + IL + + L + + GNYV+QHVL P + ++RG + LS
Sbjct: 544 HCTPEQTAPILAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQH 603
Query: 242 KCGSFVVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRL 297
K S VV+KC+ + +IEE+ N + + + D+Y NYV+Q + + R
Sbjct: 604 KFASNVVEKCVTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSEPTQR- 662
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ K++ HL +LR YG ++
Sbjct: 663 ---KVLMHKIRPHLNSLRKYTYGKHI 685
>gi|297833816|ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
gi|297330630|gb|EFH61049.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F + + LM+ +G +V KF E
Sbjct: 671 VIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTNK 730
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + ++T L S+ +G ++K ++VV L ++ L +M
Sbjct: 731 QRKELAEQVTGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARIVQELDGSVMKC 782
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRK 189
+ G+ VI +C+E FI + L L+ H GC + ++++ ++
Sbjct: 783 VHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQR 842
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ I + +L++ + GNYV+QH++ P I L G V +S K S VV+
Sbjct: 843 IIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVE 902
Query: 250 KCLKYQNAVHY--IIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D +GNYV+Q L ET L++ +
Sbjct: 903 KCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCNDQSLAL---I 958
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++++ HL AL+ YG ++
Sbjct: 959 LSRIKVHLNALKRYTYGKHI 978
>gi|357143524|ref|XP_003572951.1| PREDICTED: pumilio homolog 4-like [Brachypodium distachyon]
Length = 1010
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 26/322 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + +F + LM+ +G +V KF E E+
Sbjct: 679 VVEFSSDQYGSRFIQQKLETASTEEKNTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEA 738
Query: 74 Q---LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q LA ++ Q S+ +G ++K ++VV + + AL+ +
Sbjct: 739 QKKQLASLLKGYVLQ------LSLQMYGCRVIQKALEVVG----VEHQTQMALELDGSIM 788
Query: 131 --MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SR 187
+ + G+ VI +C+E + FI A H + L+ H GC + +++ S
Sbjct: 789 KCVRDQNGNHVIQKCIECIPQERIQFIISAFYGHVVDLSTHPYGCRVIQRVLEHCDDEST 848
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+ ++ I + L++ + GNYV+QHVL P +I L G V +S K S V
Sbjct: 849 QNAMMEEIMQSVVPLTQDQYGNYVIQHVLQYGKPEERTSIITQLAGQIVKMSQQKFASNV 908
Query: 248 VQKCLKY--QNAVHYIIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQ 301
V+KCL + +I E+L + ++ LQ + D++ NYV+Q L +R +
Sbjct: 909 VEKCLSFGSHEERQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHNR----E 964
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
++++++ HL AL+ YG ++
Sbjct: 965 LILSRIKVHLNALKRYTYGKHI 986
>gi|15239174|ref|NP_199123.1| pumilio 13 [Arabidopsis thaliana]
gi|75171666|sp|Q9FMH4.1|PUM13_ARATH RecName: Full=Putative pumilio homolog 13; Short=APUM-13;
Short=AtPUM13
gi|9757836|dbj|BAB08273.1| unnamed protein product [Arabidopsis thaliana]
gi|332007526|gb|AED94909.1| pumilio 13 [Arabidopsis thaliana]
Length = 527
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 144/314 (45%), Gaps = 11/314 (3%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
FS+A D+ S+ L++ + G +D +F + ELM +G V I C+ Q
Sbjct: 214 FSIATDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQ 273
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-AHLPPLLYHVMSALKRLFKFLMMT 133
+ LI+ +T F+ + G+ +++ L+ + + +M A+ + L
Sbjct: 274 IILIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRN 333
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR---RKQ 190
VIL C + + + + +HC +A + GC L D + R++
Sbjct: 334 TNAKYVILACFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQR 393
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ + +A L + GNYVVQ+V+ L++ D + L +Y L+ K GS VVQK
Sbjct: 394 LISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQK 453
Query: 251 CLKYQN-AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
LK + I+ +LL L + D +GNYVIQTA + + V Q L +++
Sbjct: 454 LLKLRGIDSKLIVVDLLRGIDTLLL--DPFGNYVIQTAWFVS----KEDVRQMLRYYIER 507
Query: 310 HLAALRVMKYGSNV 323
++ +R K+G+ +
Sbjct: 508 NIRLMRCNKFGNKI 521
>gi|15131678|emb|CAC48394.1| putative RNA binding protein [Saprolegnia parasitica]
Length = 773
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 20/301 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A+DQ GS+++Q+ L + + I D +F + LM+ +G +V KF +
Sbjct: 447 MVEFAKDQHGSRFIQQKLETAKADIKDIVFAEIYPVALTLMTDVFGNYVIQKFFDFGTSH 506
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
L+L++ I+ + L ++ +G ++K ++ + ++P L H++S L +
Sbjct: 507 HLSLLLRTISGR---VLELALQMYGCRVIQKALE-LKNMPEKL-HLISELTGHVLKCVKD 561
Query: 134 KPGSSVILQCLE------PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E P FI A L + LA H GC + +++ ++
Sbjct: 562 QNGNHVVQKCIEILPWKTPVAMDVGGFILSAFLGNVYSLATHPYGCRVIQRVLEHCTEAQ 621
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL I L + GNYV+QHVL P + + V S K S V
Sbjct: 622 MAPILKEIHDCCCLLVEDQYGNYVIQHVLEHGQPSERSQVINKVYPDIVRFSYHKFASNV 681
Query: 248 VQKCLKYQNA--VHYIIEELLNSDQ----ILQV-ANDKYGNYVIQT--ALAETMRQDRLS 298
++KCL Y + +H I+ ++ +++ LQV D+Y NYV+Q +A+ ++R+
Sbjct: 682 IEKCLMYASVHQLHVIVAHVMEANERGECPLQVMMKDQYANYVVQKLIDVADAEERERMX 741
Query: 299 V 299
V
Sbjct: 742 V 742
>gi|414869530|tpg|DAA48087.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1036
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 144/318 (45%), Gaps = 30/318 (9%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F + LM+ +G +V KF E Q +
Sbjct: 718 DQHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFGNYVIQKFFEHGTREQRRDLA 777
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K+ L S+ +G ++K ++V+ L + + L +M + G
Sbjct: 778 TKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIDLVHELDGHIMRCVRDQNG 829
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-----I 191
+ VI +C+E F+ A L+ H GC + +++ G+ + Q I
Sbjct: 830 NHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCIIDEI 889
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
L + + L++ + GNYV QHVL I L G V +S K S V++KC
Sbjct: 890 LQWVCI----LAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKC 945
Query: 252 LKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
++ + + I+E+ ++ +L + D+Y NYV+Q L ET +D+ + L++
Sbjct: 946 FQHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQKIL-ETCNEDQREL---LLS 1001
Query: 306 KLQQHLAALRVMKYGSNV 323
+++ H+ ALR YG ++
Sbjct: 1002 RVKDHMQALRKYTYGKHI 1019
>gi|71746472|ref|XP_822291.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831959|gb|EAN77463.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 585
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 34/293 (11%)
Query: 13 DLFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
+++ LA+DQ G ++LQ L D I + + ELM+ QY F+ K +
Sbjct: 224 NVYELAKDQHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYANFLVQKLFD-- 281
Query: 71 NESQLALIILKITFQDQLFLLASV----------DKFGSSSVKKLIKVVAHLPPLLYHVM 120
I +D + +A V G+ SV+K+I+ ++ L+ +
Sbjct: 282 -----------IMPKDVRYSVACVAAPKIAAIALTPHGTFSVQKMIETISSREELVI-IR 329
Query: 121 SALKRLFKFLMMTKPGSSVI---LQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLN 177
AL + L+ G+ I LQ EP +F+Y A C+ +A ++QGC L
Sbjct: 330 EALSKDVVRLVKDANGNHAIQKVLQLFEPD---DKEFVYAAVAVDCITIAKNKQGCCVLQ 386
Query: 178 NFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVD 237
++ ++R ++ I ++ GNYV+Q+V+S D ID I A H V
Sbjct: 387 RCLEYASPAQRSTLVRHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQ 446
Query: 238 LSLTKCGSFVVQKCLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTAL 288
L + K S V++K L + + ++ + + ++ D +GNYV+QTAL
Sbjct: 447 LCMNKFSSNVMEKVLCRVSPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTAL 499
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 166 LACHEQGCINLNNFIDNMKGSRRKQ---ILHLISVNAASLSRHRSGNYVVQHVLSLEDPF 222
+A G ++ I+ + S R++ I +S + L + +GN+ +Q VL L +P
Sbjct: 302 IALTPHGTFSVQKMIETI--SSREELVIIREALSKDVVRLVKDANGNHAIQKVLQLFEPD 359
Query: 223 LIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQVANDKYG 280
+ + A+ + ++ K G V+Q+CL+Y + ++ +L LQ+A D YG
Sbjct: 360 DKEFVYAAVAVDCITIAKNKQGCCVLQRCLEYASPAQRSTLVRHILEC--CLQIAEDPYG 417
Query: 281 NYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
NYV+Q ++ D ++ + L HL L + K+ SNV +
Sbjct: 418 NYVLQYVISAG---DSKTIDTIAIAFL-PHLVQLCMNKFSSNVME 458
>gi|213408907|ref|XP_002175224.1| PUF4 [Schizosaccharomyces japonicus yFS275]
gi|212003271|gb|EEB08931.1| PUF4 [Schizosaccharomyces japonicus yFS275]
Length = 846
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +CL + K FI+ A E+ + +A H GC L +D ++++ +
Sbjct: 646 GNHVIQKCLHKFSSEKLQFIFTAMEENIVEIATHRHGCCVLQRSLDRAGEENKRRLAFKV 705
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
NA +L + GNYVVQ+V L + D + GH DLS+ K S ++KC++
Sbjct: 706 IANALALVQDPFGNYVVQYVFDLRNDEYNDMLVTQFSGHICDLSMQKFSSNAIEKCIRVS 765
Query: 256 N--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAA 313
+ ++EE+L S ++ ++ D Y NYVIQ+ L + + QRL+ + L
Sbjct: 766 TPESCERMLEEVLQSSRMEKLLKDSYANYVIQSFLTHVTGE----MQQRLLQAINPLLPK 821
Query: 314 LRVMKYGSNV 323
+R +G ++
Sbjct: 822 IRNTCHGRHI 831
>gi|15227038|ref|NP_180478.1| pumilio 3 [Arabidopsis thaliana]
gi|75217073|sp|Q9ZW02.1|PUM3_ARATH RecName: Full=Pumilio homolog 3; Short=APUM-3; Short=AtPUM3
gi|3980417|gb|AAC95220.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253122|gb|AEC08216.1| pumilio 3 [Arabidopsis thaliana]
Length = 964
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 631 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPP 690
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ D + L S+ +G ++K I+VV L + +K L +M
Sbjct: 691 QRRELGEKLI--DNVLPL-SLQMYGCRVIQKAIEVVD-----LDQKIQMVKELDGHVMRC 742
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRK 189
+ G+ V+ +C+E +FI H + L+ H GC + +++ +
Sbjct: 743 VRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQS 802
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 803 KVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVE 862
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 863 KCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 918
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG ++
Sbjct: 919 LTRIKVHLNALKKYTYGKHI 938
>gi|429963921|gb|ELA45919.1| hypothetical protein VCUG_02588 [Vavraia culicis 'floridensis']
Length = 550
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 35/325 (10%)
Query: 4 IAFEHCTNHDLFSLAQDQEGSQYLQENLS-SGDSRILDKLFWVVSGFTF-ELMSGQYGRF 61
+ + CTN + +DQEGS+++Q+ L S D ++ W+V EL + +G +
Sbjct: 248 VDIDTCTN-----IVKDQEGSRFIQKRLELSTD----EEWIWLVKHIKVKELCTDLFGNY 298
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYH-VM 120
V K IE N A I + + + SV+ FG V++L+ + YH +
Sbjct: 299 VIQKLIE--NRDCHAYIT---QYLEGCYKEMSVNAFGCRVVQRLLDEDVNGGGEYYHRIA 353
Query: 121 SALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
LK L+ G+ V+ + +E + ++ F C+ L+ H+ GC L
Sbjct: 354 DELKAHILDLVYDSNGNHVVQKIVEREIDFESVF-----YNDCIQLSNHKYGCRVLQKLF 408
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
+ + S I+ + N L+ ++ GNYV+QH++++ +L+ + L + SL
Sbjct: 409 EKNECS---TIIGKLIDNCLDLAENQYGNYVLQHIITIRPEYLV-RVSDILSPYIFSFSL 464
Query: 241 TKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLS 298
K S V++K +K + ++ I++ELL S+ IL+++ DKY NYVIQ L R
Sbjct: 465 HKFASNVIEKIIKMCDEKRLNSILDELLASNCILKMSMDKYANYVIQRILESKSR----- 519
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+R+ L ++ LR Y +
Sbjct: 520 --ERVTNVLMANVNELRNCVYSKQI 542
>gi|414869535|tpg|DAA48092.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1043
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 144/318 (45%), Gaps = 30/318 (9%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F + LM+ +G +V KF E Q +
Sbjct: 725 DQHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFGNYVIQKFFEHGTREQRRDLA 784
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K+ L S+ +G ++K ++V+ L + + L +M + G
Sbjct: 785 TKLVGH---VLPLSLQMYGCRVIQKALEVME-----LDQKIDLVHELDGHIMRCVRDQNG 836
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-----I 191
+ VI +C+E F+ A L+ H GC + +++ G+ + Q I
Sbjct: 837 NHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCIIDEI 896
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
L + + L++ + GNYV QHVL I L G V +S K S V++KC
Sbjct: 897 LQWVCI----LAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKC 952
Query: 252 LKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
++ + + I+E+ ++ +L + D+Y NYV+Q L ET +D+ + L++
Sbjct: 953 FQHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQKIL-ETCNEDQREL---LLS 1008
Query: 306 KLQQHLAALRVMKYGSNV 323
+++ H+ ALR YG ++
Sbjct: 1009 RVKDHMQALRKYTYGKHI 1026
>gi|20465637|gb|AAM20149.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
Length = 972
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + S + ++ + LM+ +G +V KF E
Sbjct: 639 VVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEH---- 694
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
L + D+LF L S+ +G ++K I+VV L + +K L +
Sbjct: 695 --GLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 747
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGS 186
M + G+ V+ +C+E +FI + + L+ H GC + +++
Sbjct: 748 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPD 807
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ +++ I + L++ + GNYV+QHVL P I L G V +S K S
Sbjct: 808 TQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 867
Query: 247 VVQKCLKYQNAV--HYIIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVH 300
VV+KCL + +++ E+L + ++ LQ + D++ NYV+Q L Q R
Sbjct: 868 VVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR---- 923
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++ +++ HL AL+ YG ++
Sbjct: 924 ELILGRIKVHLNALKKYTYGKHI 946
>gi|15227051|ref|NP_180482.1| pumilio 2 [Arabidopsis thaliana]
gi|334184556|ref|NP_001189630.1| pumilio 2 [Arabidopsis thaliana]
gi|75217075|sp|Q9ZW06.1|PUM2_ARATH RecName: Full=Pumilio homolog 2; Short=APUM-2; Short=AtPUM2
gi|3980413|gb|AAC95216.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253126|gb|AEC08220.1| pumilio 2 [Arabidopsis thaliana]
gi|330253127|gb|AEC08221.1| pumilio 2 [Arabidopsis thaliana]
Length = 972
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + S + ++ + LM+ +G +V KF E
Sbjct: 639 VVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEH---- 694
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
L + D+LF L S+ +G ++K I+VV L + +K L +
Sbjct: 695 --GLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHV 747
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGS 186
M + G+ V+ +C+E +FI + + L+ H GC + +++
Sbjct: 748 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPD 807
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ +++ I + L++ + GNYV+QHVL P I L G V +S K S
Sbjct: 808 TQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 867
Query: 247 VVQKCLKYQNAV--HYIIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVH 300
VV+KCL + +++ E+L + ++ LQ + D++ NYV+Q L Q R
Sbjct: 868 VVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR---- 923
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++ +++ HL AL+ YG ++
Sbjct: 924 ELILGRIKVHLNALKKYTYGKHI 946
>gi|326676804|ref|XP_002665632.2| PREDICTED: pumilio homolog 1 [Danio rerio]
Length = 1152
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 78/321 (24%), Positives = 145/321 (45%), Gaps = 22/321 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 817 VMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLD 876
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 877 QKLALAERI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 933
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E H FI A L+ H GC + +++ + IL
Sbjct: 934 QNGNHVVQKCIECVQPHALQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLSILE 993
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC-- 251
I + L + + GNYV+QHVL I +RG+ + LS K S VV+KC
Sbjct: 994 EIHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVT 1053
Query: 252 --LKYQNAVHYIIEELLN-----SDQILQVANDKYGNYVIQTAL--AETMRQDRLSVHQR 302
L+ + A+ +I+E+ + + + D+Y NYV+Q + AE Q ++ +H
Sbjct: 1054 HSLRAERAM--LIDEVCSMADGPHSALYTMMKDQYANYVVQKMIDVAEPT-QRKIVMH-- 1108
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1109 ---KIRPHIATLRKYTYGKHI 1126
Score = 41.6 bits (96), Expect = 0.52, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 105/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D ++++++ + G + + Q G
Sbjct: 877 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNG 936
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 937 NHVVQKCIECVQPHALQFII--DAFKGQVFAL-STHPYGCRVIQRILEHC--LPEQTLSI 991
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ + + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 992 LEEIHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKC 1051
Query: 180 IDNMKGSRRKQILHLISVNAA-------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + A ++ + + NYVVQ ++ + +P + +R
Sbjct: 1052 VTHSLRAERAMLIDEVCSMADGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIR 1111
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 1112 PHIATLRKYTYGKHILAKLEKY 1133
>gi|261331948|emb|CBH14941.1| pumillio RNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 585
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 28/290 (9%)
Query: 13 DLFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
+++ LA+DQ G ++LQ L D I + + ELM+ QY F+ K +
Sbjct: 224 NVYELAKDQHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYANFLVQKLFD-- 281
Query: 71 NESQLALIILKITFQDQLFLLASV----------DKFGSSSVKKLIKVVAHLPPLLYHVM 120
I +D + +A V G+ SV+K+I+ ++ L+ +
Sbjct: 282 -----------IMPKDVRYNVACVAAPKIAAIALTPHGTFSVQKMIETISSREELVI-IR 329
Query: 121 SALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
AL + L+ G+ I + L+ +F+Y A C+ +A ++QGC L +
Sbjct: 330 EALSKDVVRLVKDANGNHAIQKVLQRFEPDDKEFVYAAVAVDCITIAKNKQGCCVLQRCL 389
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
+ ++R ++ I ++ GNYV+Q+V+S D ID I A H V L +
Sbjct: 390 EYASPAQRSTLVRHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQLCM 449
Query: 241 TKCGSFVVQKCLKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTAL 288
K S V++K L + + ++ + + ++ D +GNYV+QTAL
Sbjct: 450 NKFSSNVMEKVLCRVSPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTAL 499
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 166 LACHEQGCINLNNFIDNMKGSRRKQ---ILHLISVNAASLSRHRSGNYVVQHVLSLEDPF 222
+A G ++ I+ + S R++ I +S + L + +GN+ +Q VL +P
Sbjct: 302 IALTPHGTFSVQKMIETI--SSREELVIIREALSKDVVRLVKDANGNHAIQKVLQRFEPD 359
Query: 223 LIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQVANDKYG 280
+ + A+ + ++ K G V+Q+CL+Y + ++ +L LQ+A D YG
Sbjct: 360 DKEFVYAAVAVDCITIAKNKQGCCVLQRCLEYASPAQRSTLVRHILEC--CLQIAEDPYG 417
Query: 281 NYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
NYV+Q ++ D ++ + L HL L + K+ SNV +
Sbjct: 418 NYVLQYVISAG---DSKTIDTIAIAFL-PHLVQLCMNKFSSNVME 458
>gi|50552866|ref|XP_503843.1| YALI0E12001p [Yarrowia lipolytica]
gi|49649712|emb|CAG79436.1| YALI0E12001p [Yarrowia lipolytica CLIB122]
Length = 752
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 146/314 (46%), Gaps = 17/314 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L S +F + + +LM+ +G +V KF + +
Sbjct: 432 IVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTDVFGNYVVQKFFVHGSNA 491
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q A++ ++ + L S+ +G V+K I+ V H+++ L + +
Sbjct: 492 QKAVLTKQM---EGHVLSLSLQMYGCRVVQKAIEYVDTA--KQAHLINELDKHVLRCVKD 546
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI + +E FI A E LA H GC + +++ + ++ IL
Sbjct: 547 QNGNHVIQKAIEKIPPQHIQFIINAFNEQVYQLATHPYGCRVIQRMLEHCEEAQ-AAILA 605
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ A L + + GNYV+QHVL P +A+ ++ H + S K S VV+KC+
Sbjct: 606 ELHNYAYHLIQDQYGNYVIQHVLEQGAPDDKEAMMLVIKQHVLIFSRHKFASNVVEKCVI 665
Query: 254 YQNAVHY--IIEELLN--SDQILQVA---NDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
Y N +IEE+ D L + D++ NYVIQ L + +D LV+
Sbjct: 666 YGNRRQRRALIEEIATEREDGTLPITVMMKDQFANYVIQKLLDVSEGED----FDLLVSI 721
Query: 307 LQQHLAALRVMKYG 320
++ HLA+L+ YG
Sbjct: 722 IKPHLASLKKYSYG 735
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + +++ G + I I ++ L GNYVVQ
Sbjct: 431 HIVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTDVFGNYVVQKFFVHGSN 490
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQVANDKY 279
+ + GH + LSL G VVQK ++Y + ++I EL +L+ D+
Sbjct: 491 AQKAVLTKQMEGHVLSLSLQMYGCRVVQKAIEYVDTAKQAHLINEL--DKHVLRCVKDQN 548
Query: 280 GNYVIQTALAETMRQ 294
GN+VIQ A+ + Q
Sbjct: 549 GNHVIQKAIEKIPPQ 563
>gi|449496651|ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
sativus]
Length = 1043
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 152/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+F + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 709 VFEFSGDQYGSRFIQQKLETATADXKNMIYQEIMPQALALMTDVFGNYVIQKFFEH---- 764
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
L + ++LF L S+ +G ++K I+VV + L HVM ++
Sbjct: 765 --GLAAQRRELANKLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVGELDGHVMRCVR 822
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E FI + + L+ H GC + +++ K
Sbjct: 823 --------DQNGNHVIQKCIECVPESAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCK 874
Query: 185 G-SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ + +++ I + + L++ + GNYVVQHVL AI L G V +S K
Sbjct: 875 DETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKF 934
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRL 297
S VV+KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R
Sbjct: 935 ASNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR- 993
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++++++ HL AL+ YG ++
Sbjct: 994 ---ELILSRIKVHLNALKKYTYGKHI 1016
>gi|158828189|gb|ABW81068.1| Mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 968
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 630 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 689
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ D + L S+ +G ++K I+VV L + +K L +M
Sbjct: 690 QRRELGEKLI--DNVLPL-SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 741
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRK 189
+ G+ V+ +C+E +FI H + L+ H GC + +++ +
Sbjct: 742 VRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQS 801
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 802 KVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVE 861
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 862 KCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 917
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG ++
Sbjct: 918 LTRIKVHLNALKKYTYGKHI 937
>gi|218194334|gb|EEC76761.1| hypothetical protein OsI_14838 [Oryza sativa Indica Group]
Length = 756
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 143/317 (45%), Gaps = 58/317 (18%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ ++ DQ GS+++Q+ L + +K+F + L + +G +V KF E ES
Sbjct: 453 VMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATES 512
Query: 74 QLALIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
QL+ + DQL FL S +G V+K+I VV L+R +
Sbjct: 513 QLSQLA------DQLRGHFLQLSFQMYGCRVVQKVIDVVD------------LERKISIV 554
Query: 131 MMTKPGSSVILQCL-EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
K + +L+C+ + + NH+ LEHC A +
Sbjct: 555 GELK---NSVLRCISDQNGNHR-------VLEHCHNPAT-------------------QS 585
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I A L+ + GNYVVQHVL P +I L G V+LS K S VV+
Sbjct: 586 AVMDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVE 645
Query: 250 KCLKY--QNAVHYIIEELLNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
KCL + + +I E+++S Q Q + D++GNYV+Q L +T L V +++
Sbjct: 646 KCLSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL-QTCDDKFLVV---ILSS 701
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL L+ +G ++
Sbjct: 702 IKMHLNELKNYTFGKHI 718
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 38/172 (22%)
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
R++I I NA +L+ GNYV+Q + + LRGH++ LS G V
Sbjct: 478 REKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLADQLRGHFLQLSFQMYGCRV 537
Query: 248 VQK-----------------------CLKYQNAVHYIIEELLNS-------DQILQVA-- 275
VQK C+ QN H ++E N D+I++ A
Sbjct: 538 VQKVIDVVDLERKISIVGELKNSVLRCISDQNGNHRVLEHCHNPATQSAVMDEIVERAFD 597
Query: 276 --NDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
DK+GNYV+Q L ++R S+ + KL + L KY SNV +
Sbjct: 598 LTEDKFGNYVVQHVLEHGRPEERSSI----IQKLSGQVVNLSQQKYASNVVE 645
>gi|195153222|ref|XP_002017528.1| GL22345 [Drosophila persimilis]
gi|194112585|gb|EDW34628.1| GL22345 [Drosophila persimilis]
Length = 675
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 152/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 249 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 307
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ + + LA + +G + K ++ ++ P ++ L
Sbjct: 308 TPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIHKGLESIS--PEQQQEIVHELDGHVLKC 362
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 363 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 422
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + N L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 423 ILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 478
Query: 247 VVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 479 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQ-KMIDVSEPTQL---KK 534
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+ ALR YG ++
Sbjct: 535 LMTKIRPHMTALRKYTYGKHI 555
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
L H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 248 LNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 307
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
P + + ++GH + L+L G V+ K L+ I+ EL +L+ D
Sbjct: 308 TPEQKNTLGMQVKGHVLQLALQMYGCRVIHKGLESISPEQQQEIVHEL--DGHVLKCVKD 365
Query: 278 KYGNYVIQ 285
+ GN+V+Q
Sbjct: 366 QNGNHVVQ 373
>gi|9757838|dbj|BAB08275.1| unnamed protein product [Arabidopsis thaliana]
Length = 546
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 22/284 (7%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
+ A+D+E S+ L ++ G +D ++ + G ELM YG V + C+ Q+
Sbjct: 207 AFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQI 266
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFKFL 130
++ +T Q F+ +D G+++++ L+ + +P ++ V + +L K
Sbjct: 267 VQLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSK-- 324
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINL-----NNFIDNMKG 185
+ VIL C H + + +++C +A + GC L + + N++
Sbjct: 325 --SNHAIFVILACFRLFPLHCR-LLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLE- 380
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
R++ I+ I+ NA L + GNYVVQ+++ L + +LIDA+ L G+Y L+ K GS
Sbjct: 381 IRQRLIMEAIA-NALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGS 439
Query: 246 FVVQKCLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTA 287
VQK LK + ++ +I+ L D +L D +GNYVIQTA
Sbjct: 440 HAVQKLLKLRWIDSRVIVIDLLREIDTLLL---DPFGNYVIQTA 480
>gi|195452258|ref|XP_002073278.1| GK14049 [Drosophila willistoni]
gi|194169363|gb|EDW84264.1| GK14049 [Drosophila willistoni]
Length = 873
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 151/318 (47%), Gaps = 14/318 (4%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 451 TNH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEF 509
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 510 GTPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLK 564
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 565 CVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTT 624
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
IL + + L + + GNYV+QHVL + ++RG + LS K S VV+
Sbjct: 625 PILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILITSVRGKVLVLSQHKFASNVVE 684
Query: 250 KCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++L+T
Sbjct: 685 KCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMT 740
Query: 306 KLQQHLAALRVMKYGSNV 323
K++ H+AALR YG ++
Sbjct: 741 KIRPHMAALRKYTYGKHI 758
>gi|291238122|ref|XP_002738980.1| PREDICTED: pumilio homolog 2-like [Saccoglossus kowalevskii]
Length = 643
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 147/331 (44%), Gaps = 39/331 (11%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L +F + G + LM+ +G +V KF E
Sbjct: 309 NH-IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILGSAYNLMTDVFGNYVIQKFFEFG 367
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---------LLYHVMS 121
Q + ++ + + LA + +G ++K ++ + PP L HV+
Sbjct: 368 TPDQKMALAQRV--RGHVLPLA-LQMYGCRVIQKALESI---PPDQQVDIVKELDGHVLK 421
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
+K + G+ V+ +C+E FI A L+ H GC + ++
Sbjct: 422 CVK--------DQNGNHVVQKCIECVEPVALQFIIDAFRGQIFVLSTHPYGCRVIQRILE 473
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ + IL + N L + + GNYV+QHVL P I LRG + LS
Sbjct: 474 HCTVDQTIPILEELHDNTERLVQDQYGNYVIQHVLEHGRPEDKSKIVAELRGKVLVLSQH 533
Query: 242 KCGSFVVQKCLKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQ 294
K S VV+KC+ + + +I+E+++ + + + D+Y NYV+Q +
Sbjct: 534 KFASNVVEKCVTHASRPERALLIDEVISYNDGPHSALYTMMKDQYANYVVQKMI------ 587
Query: 295 DRLSVHQR--LVTKLQQHLAALRVMKYGSNV 323
D QR L+ K++ H+A LR YG ++
Sbjct: 588 DVSEPGQRRILMQKIRPHIATLRKFTYGKHI 618
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
+ H + + + G + ++ + R+ + + I +A +L GNYV+Q
Sbjct: 308 VNHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILGSAYNLMTDVFGNYVIQKFFEFG 367
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQILQVAND 277
P A+ +RGH + L+L G V+QK L+ I++EL +L+ D
Sbjct: 368 TPDQKMALAQRVRGHVLPLALQMYGCRVIQKALESIPPDQQVDIVKEL--DGHVLKCVKD 425
Query: 278 KYGNYVIQ 285
+ GN+V+Q
Sbjct: 426 QNGNHVVQ 433
>gi|357148484|ref|XP_003574782.1| PREDICTED: pumilio homolog 5-like [Brachypodium distachyon]
Length = 983
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q +
Sbjct: 665 DQHGSRFIQQKLENCTAEEKAAVFAEVLPHATSLMTDVFGNYVIQKFFEHGTPEQRRDLG 724
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K+ L S+ +G V+K ++V+ L + + L +M + G
Sbjct: 725 TKLVGH---VLPLSLQMYGCRVVQKALEVLE-----LDQKIELVLELDGNIMRCVRDQNG 776
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E F+ + L+ H GC + +++ G + Q I+ I
Sbjct: 777 NHVIQKCIECVPTEHIGFVVSSFQGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEI 836
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+A L++ + GNYV QHVL I L G V +S K S V++KC ++
Sbjct: 837 LQSACVLAQDQYGNYVTQHVLEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCFQHG 896
Query: 256 N------AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ + I+++ +D +L + D+Y NYV+Q L Q R + LV++++
Sbjct: 897 DFAERDLLIREIVQQTEGNDTLLAMMKDQYANYVVQKILETCNDQQR----ELLVSRVKG 952
Query: 310 HLAALRVMKYGSNV 323
HL ALR YG ++
Sbjct: 953 HLQALRKYTYGKHI 966
>gi|195396057|ref|XP_002056649.1| GJ10105 [Drosophila virilis]
gi|194143358|gb|EDW59761.1| GJ10105 [Drosophila virilis]
Length = 812
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 157/322 (48%), Gaps = 22/322 (6%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 388 TNH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEF 446
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 447 GTPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLK 501
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E F+ A L+ H GC + +++ + +
Sbjct: 502 CVKDQNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTQ 561
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGS 245
IL + + +L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 562 PILDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFAS 617
Query: 246 FVVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L +
Sbjct: 618 NVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---K 673
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
+L+TK++ H+AALR YG ++
Sbjct: 674 KLMTKIRPHMAALRKYTYGKHI 695
>gi|432883258|ref|XP_004074234.1| PREDICTED: pumilio homolog 1 [Oryzias latipes]
Length = 1166
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/319 (23%), Positives = 144/319 (45%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 831 IMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 890
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 891 QKLALAERI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 947
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E H FI +A L+ H GC + +++ + IL
Sbjct: 948 QNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILE 1007
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL I +RG+ + LS K S VV+KC+
Sbjct: 1008 ELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVT 1067
Query: 254 YQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + + + D+Y NYV+Q + AE Q ++ +H
Sbjct: 1068 HASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMIDVAEPT-QRKIVMH---- 1122
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H++ LR YG ++
Sbjct: 1123 -KIRPHISTLRKYTYGKHI 1140
Score = 39.7 bits (91), Expect = 2.0, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 106/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D +++ ++ + G + + Q G
Sbjct: 891 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNG 950
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 951 NHVVQKCIECVQPHALHFIIE--AFKGQVFAL-STHPYGCRVIQRILEHC--LPEQTLPI 1005
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 1006 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1065
Query: 180 IDNMKGSRRKQILHLI-----SVNAA--SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + ++A ++ + + NYVVQ ++ + +P + +R
Sbjct: 1066 VTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIR 1125
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 1126 PHISTLRKYTYGKHILAKLEKY 1147
>gi|261872057|gb|ACY02862.1| pumilio 1, partial [Oryzias latipes]
Length = 1162
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/319 (23%), Positives = 144/319 (45%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 827 IMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 886
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 887 QKLALAERI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKD 943
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E H FI +A L+ H GC + +++ + IL
Sbjct: 944 QNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILE 1003
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL I +RG+ + LS K S VV+KC+
Sbjct: 1004 ELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVT 1063
Query: 254 YQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + + + D+Y NYV+Q + AE Q ++ +H
Sbjct: 1064 HASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMIDVAEPT-QRKIVMH---- 1118
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H++ LR YG ++
Sbjct: 1119 -KIRPHISTLRKYTYGKHI 1136
Score = 39.7 bits (91), Expect = 2.0, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 106/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D +++ ++ + G + + Q G
Sbjct: 887 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNG 946
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 947 NHVVQKCIECVQPHALHFIIE--AFKGQVFAL-STHPYGCRVIQRILEHC--LPEQTLPI 1001
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 1002 LEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKC 1061
Query: 180 IDNMKGSRRKQILHLI-----SVNAA--SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + ++A ++ + + NYVVQ ++ + +P + +R
Sbjct: 1062 VTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIR 1121
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 1122 PHISTLRKYTYGKHILAKLEKY 1143
>gi|297795139|ref|XP_002865454.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311289|gb|EFH41713.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 505
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 9/280 (3%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
L+++A+D S+ L E + G +D +F + ELM YG+ V I C
Sbjct: 191 LYAIAKDAVWSKKLLETIYQGTKETIDTIFDRIIVHICELMVDPYGKDVVMLLIGKCCSE 250
Query: 74 QLALIILKITFQDQL-FLLASVDKFGSSSVKKLIKVV-AHLPPLLYHVMSALKRLFKFLM 131
Q+ I+ +T QD F+ D G++++++L+ + + +M + + L
Sbjct: 251 QIIQIVDLVT-QDMFQFVNICFDLRGTAAIQELLDSIHKRANDQIPRIMDLINSVGLQLA 309
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR---R 188
+ +IL C ++ + +HC ++ + GC +D + R
Sbjct: 310 KSSNARFLILSCFRLFPLSHCRYLLEVVAQHCYEISIDQNGCCLYQQCLDKNRVPNPEIR 369
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
++++ + +A L + GNYVVQ+++ L + +I+A+ L G+Y L+ K GS VV
Sbjct: 370 QRLISEVISHALRLCLNCYGNYVVQYIVELNNQHVINALVRQLIGNYAHLARNKYGSHVV 429
Query: 249 QKCLKYQNA-VHYIIEELLNSDQILQVANDKYGNYVIQTA 287
QK L+ + I+ +LL+ QI + D +GNYVIQTA
Sbjct: 430 QKLLRLRGVDTRLIVVDLLS--QIDTLLLDPFGNYVIQTA 467
>gi|449708558|gb|EMD47999.1| pumilio, putative, partial [Entamoeba histolytica KU27]
Length = 499
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 22/296 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D S++++ GS+ +Q+++ G K++ + EL S + +V K IE E
Sbjct: 184 DYVSMSKEHNGSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYVIQKAIEFIPE 243
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
S+ I+ + + L ++ +G V+K ++ Y M + LF+ L
Sbjct: 244 SRH---IVPQKMKGNVLRL-TLHMYGCRVVQKAVE---------YASMKDRRLLFEELRK 290
Query: 133 T-------KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI +C+E I A L H GC + I+++
Sbjct: 291 SLVRCIEDQNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDY 350
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
++L +I ++ L+ + GNYVVQ+VL P I ++G+ V LS+ K S
Sbjct: 351 DCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSS 410
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
V++KC K+ QN I+EE+ ++ ILQ+ D++ NYV+Q + +R +
Sbjct: 411 NVIEKCFKFATQNERQQILEEIYQNNGILQMMQDQFANYVVQKIIEAIDSSEREKI 466
>gi|449450756|ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1043
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 152/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+F + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 709 VFEFSGDQYGSRFIQQKLETATADEKNMIYQEIMPQALALMTDVFGNYVIQKFFEH---- 764
Query: 74 QLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
L + ++LF L S+ +G ++K I+VV + L HVM ++
Sbjct: 765 --GLAAQRRELANKLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVGELDGHVMRCVR 822
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E FI + + L+ H GC + +++ K
Sbjct: 823 --------DQNGNHVIQKCIECVPESAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCK 874
Query: 185 G-SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ + +++ I + + L++ + GNYVVQHVL AI L G V +S K
Sbjct: 875 DETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKF 934
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRL 297
S VV+KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R
Sbjct: 935 ASNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR- 993
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++++++ HL AL+ YG ++
Sbjct: 994 ---ELILSRIKVHLNALKKYTYGKHI 1016
>gi|326328009|pdb|3Q0Q|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nrea
gi|326328011|pdb|3Q0R|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nreb
gi|326328013|pdb|3Q0S|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With Erk2 Nre
Length = 351
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 26 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 85
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ ++ ++ L +
Sbjct: 86 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 142
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 143 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 202
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 203 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 262
Query: 254 YQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 263 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 316
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 317 HKIRPHITTLRKYTYGKHI 335
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 100/253 (39%), Gaps = 20/253 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ LA G + +Q+ L S D +++ ++ + G + + Q G V K IE
Sbjct: 98 VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQ 157
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIK---VVAHLPPLLYHVMSALKRLFK 128
L II F+ Q+F+L S +G ++++++ LP ++ L + +
Sbjct: 158 PQSLQFII--DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLP-----ILEELHQHTE 209
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L+ + G+ VI LE I L L+ H+ + + + + R
Sbjct: 210 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 269
Query: 189 KQILHLISVNAA-------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
++ + ++ + + NYVVQ ++ + +P I +R H L
Sbjct: 270 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 329
Query: 242 KCGSFVVQKCLKY 254
G ++ K KY
Sbjct: 330 TYGKHILAKLEKY 342
>gi|157132421|ref|XP_001656036.1| pumilio [Aedes aegypti]
gi|108871194|gb|EAT35419.1| AAEL012420-PA [Aedes aegypti]
Length = 796
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 149/324 (45%), Gaps = 26/324 (8%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 379 TNH-IVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEY 437
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSAL 123
+ Q + ++ + + LA + +G ++K ++ + + L HV+ +
Sbjct: 438 GSPEQKQALAQQV--KGHVLPLA-LQMYGCRVIQKALESIPTEQQQEIVRELDGHVLKCV 494
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K + G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 495 K--------DQNGNHVVQKCIECVEPTALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHC 546
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ IL + N L + + GNYV+QHVL P + A+RG + LS K
Sbjct: 547 TPEQTSPILAELHANTEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKF 606
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLN-SDQILQV-ANDKYGNYVIQTALAETMRQDRLSV 299
S VV+KC+ + +IEE+ + +D L V D+Y NYV+Q + + R
Sbjct: 607 ASNVVEKCVTHATRAERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSEPTQR--- 663
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ K++ H+ +L+ YG ++
Sbjct: 664 -KVLLHKIRPHMNSLKKYTYGKHI 686
>gi|396082534|gb|AFN84143.1| Puf RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 529
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 138/293 (47%), Gaps = 26/293 (8%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
S+++DQEGS+ +Q + + + F ++ EL + +G +V K I E +
Sbjct: 223 SISKDQEGSRCIQRKMDNISKEEISWFFNNIADAAAELSANLFGNYVIQKIIPLVTEEER 282
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
+ + Q L SV +G ++KL+ V + +L V L L + +
Sbjct: 283 TRLTTSLVGQIHLL---SVHPYGCRVIQKLVDVSPDVDFILEEVKGNLLELIE----DQN 335
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +C+E + + I Q ++ L+LA H+ GC + ++ K K I+ ++
Sbjct: 336 GNHVIQKCIEKCKDRR--IILQQFSKNSLFLATHKYGCRVIQRMLEFCKEEEIKDIVEIL 393
Query: 196 SVNAASLSRHRSGNYVVQHVLSL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
N +L + GNYV+QH+L++ E +I+ I + Y +LS K S VV++C
Sbjct: 394 INNIKTLVDDQYGNYVIQHILTVGKEKEKNLVIEKI---IEKSY-ELSKCKFSSNVVEQC 449
Query: 252 LKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQ---TALAETMRQD 295
+K N + +E + + + + D YGNYV+Q + E +R++
Sbjct: 450 VKLSNNGQRERFLEKFLEPVGSKPGMYSMCIDMYGNYVVQRLYDSSGENIRKE 502
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 150 HKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGN 209
+KN F + E C+ ++ ++G + +DN+ + I+ AA LS + GN
Sbjct: 208 YKNVFGGTSMKEICISISKDQEGSRCIQRKMDNISKEEISWFFNNIADAAAELSANLFGN 267
Query: 210 YVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSD 269
YV+Q ++ L + +L G LS+ G V+QK + V +I+EE+ +
Sbjct: 268 YVIQKIIPLVTEEERTRLTTSLVGQIHLLSVHPYGCRVIQKLVDVSPDVDFILEEVKGN- 326
Query: 270 QILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
+L++ D+ GN+VIQ + E + R+ + Q
Sbjct: 327 -LLELIEDQNGNHVIQKCI-EKCKDRRIILQQ 356
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 166 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLID 225
L+ H GC + +D IL + N L ++GN+V+Q + I
Sbjct: 296 LSVHPYGCRVIQKLVD--VSPDVDFILEEVKGNLLELIEDQNGNHVIQKCIEKCKDRRII 353
Query: 226 AICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYV 283
F+ + L+ K G V+Q+ L++ + + I+E L+N+ I + +D+YGNYV
Sbjct: 354 LQQFSKNSLF--LATHKYGCRVIQRMLEFCKEEEIKDIVEILINN--IKTLVDDQYGNYV 409
Query: 284 IQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
IQ L +++ V ++++ K + L K+ SNV
Sbjct: 410 IQHILTVGKEKEKNLVIEKIIEKSYE----LSKCKFSSNV 445
>gi|270016510|gb|EFA12956.1| pumilio [Tribolium castaneum]
Length = 1102
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 146/326 (44%), Gaps = 32/326 (9%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 763 NH-IVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEFG 821
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---------LLYHVMS 121
Q + K+ L ++ +G ++K ++ + PP L HV+
Sbjct: 822 TAEQKTTLAQKVRGH---VLPLALQMYGCRVIQKALESI---PPEQQQEIVRELDGHVLK 875
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
+K + G+ V+ +C+E + FI Q+ L+ H GC + ++
Sbjct: 876 CVK--------DQNGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILE 927
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ + IL + + L + + GNYV+QHVL P + ++RG + LS
Sbjct: 928 HCTPEQTAPILAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQH 987
Query: 242 KCGSFVVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRL 297
K S VV+KC+ + +IEE+ N + + + D+Y NYV+Q + + R
Sbjct: 988 KFASNVVEKCVTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSEPTQR- 1046
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ K++ HL +LR YG ++
Sbjct: 1047 ---KVLMHKIRPHLNSLRKYTYGKHI 1069
>gi|183233559|ref|XP_655386.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801513|gb|EAL49999.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
Length = 528
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 22/285 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D S++++ GS+ +Q+++ G K++ + EL S + +V K IE E
Sbjct: 213 DYVSMSKEHNGSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYVIQKAIEFIPE 272
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
S+ ++ K+ L ++ +G V+K ++ Y M + LF+ L
Sbjct: 273 SR-HIVPQKMKGN---VLRLTLHMYGCRVVQKAVE---------YASMKDRRLLFEELRK 319
Query: 133 T-------KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI +C+E I A L H GC + I+++
Sbjct: 320 SLVRCIEDQNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDY 379
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
++L +I ++ L+ + GNYVVQ+VL P I ++G+ V LS+ K S
Sbjct: 380 DCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSS 439
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
V++KC K+ QN I+EE+ ++ ILQ+ D++ NYV+Q +
Sbjct: 440 NVIEKCFKFATQNERQQILEEIYQNNGILQMMQDQFANYVVQKII 484
>gi|356538984|ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + + LM+ +G +V KF E S
Sbjct: 716 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHSLALMTDVFGNYVVQKFFEHGLAS 775
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ L S+ +G ++K I+VV L + ++ L +M
Sbjct: 776 QRRELANKLLGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 827
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E FI + + L+ H GC + +++ K +Q
Sbjct: 828 VRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQ 887
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I + L++ + GNYVVQHVL P I L G V +S K S VV+
Sbjct: 888 KVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSCIIKELAGKIVQMSQQKFASNVVE 947
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 948 KCLTFGGPSERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 1003
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++++ HL AL+ YG ++
Sbjct: 1004 LSRIKVHLNALKKYTYGKHI 1023
>gi|321475178|gb|EFX86141.1| hypothetical protein DAPPUDRAFT_308458 [Daphnia pulex]
Length = 581
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 154/329 (46%), Gaps = 34/329 (10%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L +F + T+ LM+ +G +V KF E
Sbjct: 244 NH-IVEFSQDQHGSRFIQQKLERATPAEKQMVFTEIIVGTYALMTDVFGNYVIQKFFEFG 302
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALK 124
+ Q + + KI + + LA + +G ++K ++ V + L HV+ +K
Sbjct: 303 SPEQKSTLAQKI--RGHVLPLA-LQMYGCRVIQKALESVPSDQQKEIVRELDGHVLKCVK 359
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ V+ +C+E + FI A L L+ H GC + +++
Sbjct: 360 --------DQNGNHVVQKCIECVDPMQLQFIIDAFEGQVLSLSTHPYGCRVIQRILEHCT 411
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+ +L+ + N +L + + GNYV+QHVL P I A++G + LS K
Sbjct: 412 PEQTSPVLNELHHNTETLIQDQYGNYVIQHVLEHGKPEDKLRIVTAVKGKVLSLSQHKFA 471
Query: 245 SFVVQKCLKY--QNAVHYIIEELLNSDQ------ILQVANDKYGNYVIQTALAETMRQDR 296
S VV+KC+ + ++ +I+E+++ + + + D+Y NYV+Q + D
Sbjct: 472 SNVVEKCVSHATRSERASLIDEVISFNDASPHSPLHTMMKDQYANYVVQKMI------DV 525
Query: 297 LSVHQR--LVTKLQQHLAALRVMKYGSNV 323
QR L+ K++ H++ LR YG ++
Sbjct: 526 AEPSQRKLLMHKIRPHVSTLRKYTYGKHI 554
>gi|48716356|dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group]
gi|125541647|gb|EAY88042.1| hypothetical protein OsI_09469 [Oryza sativa Indica Group]
gi|125584167|gb|EAZ25098.1| hypothetical protein OsJ_08892 [Oryza sativa Japonica Group]
Length = 1001
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E E
Sbjct: 672 VVEFSSDQYGSRFIQQKLETASAEEKDTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEP 731
Query: 74 Q---LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q LA ++ Q S+ +G ++K +++V + AL+ +
Sbjct: 732 QKKQLASLLKGYVLQ------LSLQMYGCRVIQKALEMVE----VEQQTQMALELDGNIM 781
Query: 131 --MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID-----NM 183
+ + G+ VI +C+E + FI A H + L+ H GC + ++ N
Sbjct: 782 KCVRDQNGNHVIQKCIECIPQERIRFIISAFYGHVVELSTHPYGCRVIQRVLEHCNDENT 841
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ + ++I+ + + L+ + GNYV+QHVL P AI L G V +S K
Sbjct: 842 QSTMMEEIMQSVVL----LTLDQYGNYVIQHVLQHGKPDERSAIIKQLAGQIVKMSQQKF 897
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRL 297
S VV+KCL + + +I E+L + ++ LQ + D++ NYV+Q L Q+R
Sbjct: 898 ASNVVEKCLSFGSPEERQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQNR- 956
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++++++ HL AL+ YG ++
Sbjct: 957 ---ELILSRIKVHLNALKRYTYGKHI 979
>gi|390179099|ref|XP_002137873.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859712|gb|EDY68431.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 907
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 151/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 481 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 539
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ L ++ +G ++K ++ ++ P ++ L
Sbjct: 540 TPEQKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 594
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 595 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 654
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + N L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 655 ILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 710
Query: 247 VVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 711 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 766
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+ ALR YG ++
Sbjct: 767 LMTKIRPHMTALRKYTYGKHI 787
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
L H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 480 LNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 539
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
P + + ++GH + L+L G V+QK L+ I+ EL +L+ D
Sbjct: 540 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 597
Query: 278 KYGNYVIQ 285
+ GN+V+Q
Sbjct: 598 QNGNHVVQ 605
>gi|83771739|dbj|BAE61869.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 860
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 25/324 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S +++F + G + +LM+ +G +V K E
Sbjct: 448 NH-VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHG 506
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N++Q ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 507 NQTQKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHV 558
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E + F+ A + LA H GC + +++ K
Sbjct: 559 LRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEED 618
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVL-SLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
R+ IL + V A L + GNYV+QHV+ + ED + + + + S K S
Sbjct: 619 REAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS-NLLTYSKHKFASN 677
Query: 247 VVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSV 299
VV+K +++ ++ H II L ++D +L + D++GNYVIQ L + +R +
Sbjct: 678 VVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA- 736
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
LV +++ L+ L+ YG +
Sbjct: 737 ---LVEEIKPLLSQLKKYSYGKQI 757
>gi|145501806|ref|XP_001436883.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404028|emb|CAK69486.1| unnamed protein product [Paramecium tetraurelia]
Length = 475
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 159/331 (48%), Gaps = 27/331 (8%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+ ++ +Q S+ +Q+ +G + ++FW V E +G ++ K +E +
Sbjct: 152 DIENMCGNQVLSRKVQKIFETGSANQKQQIFWKVQANCQEFSKDVFGNYLIQKILEKGSL 211
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+Q LI ++ L S + FG ++KLI+++++ L+ + +K+ + L++
Sbjct: 212 AQQILIFKQLL---PYVLELSKNNFGCRVIQKLIEIISNNDQLINPFIEEIKKNVQSLLI 268
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G VIL+CLE FI + E C ++ + GC + I+N Q+
Sbjct: 269 DQNGKYVILKCLENLQIDAVRFILKPTEEQCNHMCDSQYGCKIIQKLIENYPS----QVD 324
Query: 193 HLISVNAAS---LSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
LI + ++ L + +SGNY++Q+ +++ P ++ I + H L K S V+
Sbjct: 325 DLIQICISTQDLLYKSQSGNYIIQY--AIKQPKNLEVIANYIINHLEYLCFNKYASNTVE 382
Query: 250 KCLKY-----QNAVHYIIEELLNSDQI---LQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
L+Y +N + I+ +L + +++ + +A + +GNYVI+ L L Q
Sbjct: 383 AILEYLTPKLKNDLIQILIKLSDQNKMFIFINIATNPFGNYVIKRLLYTF----ELEHTQ 438
Query: 302 RLVTKLQQHLAALRVMK---YGSNVYKWTTA 329
+L+ ++Q+L L+ +K YG +Y T
Sbjct: 439 QLLNVIKQNLNLLQYIKQSDYGQRIYTILTT 469
>gi|357443169|ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355480910|gb|AES62113.1| 60S ribosomal protein L4 [Medicago truncatula]
Length = 1176
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 150/327 (45%), Gaps = 29/327 (8%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+ DQ GS+++Q+ L + K+F + LM+ +G +V KF E +SQ
Sbjct: 650 FSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDSQRK 709
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+ ++T L S+ +G ++K ++VV ++S L + + G
Sbjct: 710 ELANQLTGH---VLPLSLQMYGCRVIQKALEVVDV--DQQSQMVSELSGAIMKCVRDQNG 764
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLI 195
+ VI +C+E ++ FI + + L+ H GC + +++ + ++I + I
Sbjct: 765 NHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEI 824
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+ +L++ + GNYV+QH+L P + L G V +S K S V++KCL +
Sbjct: 825 MQSVCTLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVIEKCLAFG 884
Query: 256 NAVHY--IIEELLNSD------QILQVAN-----------DKYGNYVIQTALAETMRQDR 296
+ ++ E+L + Q QV + D +GNYV+Q L ET
Sbjct: 885 SPEERQILVNEMLGTSDENEPLQRFQVNDDMACNMQAMMKDPFGNYVVQKVL-ETCDDQS 943
Query: 297 LSVHQRLVTKLQQHLAALRVMKYGSNV 323
L + ++++++ HL AL+ YG ++
Sbjct: 944 LEL---ILSRIKVHLNALKRYTYGKHI 967
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 8/177 (4%)
Query: 149 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 208
N F ++H + + + G + ++ + +I I +A +L G
Sbjct: 633 NKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFG 692
Query: 209 NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELL 266
NYV+Q + L GH + LSL G V+QK L+ + ++ EL
Sbjct: 693 NYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSEL- 751
Query: 267 NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
S I++ D+ GN+VIQ + E++ Q+R+ Q ++T + AL YG V
Sbjct: 752 -SGAIMKCVRDQNGNHVIQKCI-ESVPQNRI---QFIITSFYGQVVALSTHPYGCRV 803
>gi|302853691|ref|XP_002958359.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300256312|gb|EFJ40581.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 345
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 147/332 (44%), Gaps = 37/332 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSG------DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFI 67
++ + DQ GS+++Q+ G ++ +D F V LM+ +G +V KF+
Sbjct: 23 VYEFSLDQHGSRFIQQARGGGLKLECVNNEDVDAAFGEVVPRILHLMTDVFGNYVVQKFL 82
Query: 68 ESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKV------VAHLPPLLYHVMS 121
E A I + L S+ +G V+K ++V V + L HVM
Sbjct: 83 EHGTPQHRACISKALHGH---VLQLSLQMYGCRVVQKALEVFTEDQQVDLVSELDGHVMR 139
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
++ + G+ VI +C+E H+ + L + L+ H GC + ++
Sbjct: 140 CVR--------DQNGNHVIQKCIECVPTHRIAGLLDNFLMCVVPLSTHPFGCRIIQRILE 191
Query: 182 NMKGSRRKQ-ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
+++ RR+ ++ I A L++ + GNYV+QHVL P +I +L V LS+
Sbjct: 192 HVRDQRRRAAVMADILGAAVQLTQDQYGNYVIQHVLERGTPEEKSSIIGSLSATVVQLSM 251
Query: 241 TKCGSFVVQKCLKYQNAVHY--IIEELLNSDQI-------LQVANDKYGNYVIQTALAET 291
K S V++KCL + + II +L I + D++GNYV+Q L
Sbjct: 252 HKFASNVIEKCLIHGSTADRDLIINRMLGPLNISPKRGPWTAMIKDQFGNYVVQKVLEVC 311
Query: 292 MRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
R + ++ +++ L AL+ YG ++
Sbjct: 312 TDVQR----EAMLARVRAQLHALKRFTYGKHI 339
>gi|194744548|ref|XP_001954755.1| GF18428 [Drosophila ananassae]
gi|190627792|gb|EDV43316.1| GF18428 [Drosophila ananassae]
Length = 896
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 154/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 454 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 512
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 513 TPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 567
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 568 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 627
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 628 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 683
Query: 247 VVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 684 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 739
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 740 LMTKIRPHMAALRKYTYGKHI 760
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
+ H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 453 VNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 512
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
P + + ++GH + L+L G V+QK L+ I+ EL +L+ D
Sbjct: 513 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 570
Query: 278 KYGNYVIQ 285
+ GN+V+Q
Sbjct: 571 QNGNHVVQ 578
>gi|317148910|ref|XP_001823002.2| mRNA binding protein Pumilio 2 [Aspergillus oryzae RIB40]
Length = 880
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 25/324 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S +++F + G + +LM+ +G +V K E
Sbjct: 468 NH-VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHG 526
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N++Q ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 527 NQTQKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHV 578
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E + F+ A + LA H GC + +++ K
Sbjct: 579 LRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEED 638
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVL-SLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
R+ IL + V A L + GNYV+QHV+ + ED + + + + S K S
Sbjct: 639 REAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS-NLLTYSKHKFASN 697
Query: 247 VVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSV 299
VV+K +++ ++ H II L ++D +L + D++GNYVIQ L + +R +
Sbjct: 698 VVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA- 756
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
LV +++ L+ L+ YG +
Sbjct: 757 ---LVEEIKPLLSQLKKYSYGKQI 777
>gi|66814744|ref|XP_641551.1| RNA binding protein [Dictyostelium discoideum AX4]
gi|60469557|gb|EAL67547.1| RNA binding protein [Dictyostelium discoideum AX4]
Length = 785
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 22/321 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ ++DQ GS+ +Q+ + + +F V LM+ +G +V KF E
Sbjct: 464 IAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFFEHGTTE 523
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++ K++ L ++ +G ++K I+ + +L ++ L +
Sbjct: 524 QKRILADKLSGH---ILSLTLQMYGCRVIQKAIESIELDKQIL--LIGELNGHIVQCVTD 578
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +C+E H FI + H LA H GC + +++ + IL
Sbjct: 579 QNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAEKQVAPILD 638
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ A SL + + GNYV+QHVL P AI L+G +LS K S V++KC++
Sbjct: 639 ELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQHKFASNVIEKCVQ 698
Query: 254 YQNAVHY--IIEELL-------NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR-- 302
+ II E+L +S+ +L++ D Y NYVIQ L D + QR
Sbjct: 699 HGCTAERILIINEILGDANSPNSSNVLLKILKDPYANYVIQKIL------DIVEPAQRDM 752
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
++ ++Q + L+ + G ++
Sbjct: 753 IINRIQPFVPTLKKVTPGKHI 773
>gi|391872405|gb|EIT81532.1| translational repressor Pumilio/PUF3 [Aspergillus oryzae 3.042]
Length = 906
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 25/324 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S +++F + G + +LM+ +G +V K E
Sbjct: 494 NH-VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHG 552
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N++Q ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 553 NQTQKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHV 604
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E + F+ A + LA H GC + +++ K
Sbjct: 605 LRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEED 664
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVL-SLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
R+ IL + V A L + GNYV+QHV+ + ED + + + + S K S
Sbjct: 665 REAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS-NLLTYSKHKFASN 723
Query: 247 VVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSV 299
VV+K +++ ++ H II L ++D +L + D++GNYVIQ L + +R +
Sbjct: 724 VVEKSIEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA- 782
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
LV +++ L+ L+ YG +
Sbjct: 783 ---LVEEIKPLLSQLKKYSYGKQI 803
>gi|158828234|gb|ABW81111.1| putative pumilio Mpt5 [Boechera divaricarpa]
Length = 975
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E
Sbjct: 642 VVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPP 701
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ D + L S+ +G ++K I+VV L + +K L +M
Sbjct: 702 QRRELADKLL--DNVLPL-SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRC 753
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRK 189
+ G+ V+ +C+E +FI + + L+ H GC + +++ +
Sbjct: 754 VRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQS 813
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ I + L++ + GNYV+QHVL P I L G V +S K S VV+
Sbjct: 814 KVMEEIMSTVSMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVE 873
Query: 250 KCLKYQNAVHY--IIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 874 KCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 929
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+T+++ HL AL+ YG ++
Sbjct: 930 LTRIKVHLNALKKYTYGKHI 949
>gi|5106561|gb|AAD39751.1|AF128626_1 RNA binding protein PufA [Dictyostelium discoideum]
Length = 795
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 22/321 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ ++DQ GS+ +Q+ + + +F V LM+ +G +V KF E
Sbjct: 474 IAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFFEHGTTE 533
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++ K++ L ++ +G ++K I+ + +L ++ L +
Sbjct: 534 QKRILADKLSGH---ILSLTLQMYGCRVIQKAIESIELDKQIL--LIGELNGHIVQCVTD 588
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +C+E H FI + H LA H GC + +++ + IL
Sbjct: 589 QNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAEKQVAPILD 648
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ A SL + + GNYV+QHVL P AI L+G +LS K S V++KC++
Sbjct: 649 ELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQHKFASNVIEKCVQ 708
Query: 254 YQNAVHY--IIEELL-------NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR-- 302
+ II E+L +S+ +L++ D Y NYVIQ L D + QR
Sbjct: 709 HGCTAERILIINEILGDANSPNSSNVLLKILKDPYANYVIQKIL------DIVEPAQRDM 762
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
++ ++Q + L+ + G ++
Sbjct: 763 IINRIQPFVPTLKKVTPGKHI 783
>gi|223994913|ref|XP_002287140.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976256|gb|EED94583.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 300
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 32/307 (10%)
Query: 17 LAQDQEGSQYLQENLS----SGDSRILDKLFWVVSGFTF--ELMSGQYGRFVFGKFIESC 70
L++DQ G + LQ+ L S + IL++ G TF E M +G ++F K +E
Sbjct: 13 LSRDQVGCRLLQQALDEDGPSAATAILNE------GLTFWAEAMVDPFGNYLFQKILERI 66
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+ +++ ++ + + AS++ G+ SV+K+++ + AL+ L
Sbjct: 67 TPEERVILVKSVSTR---LVNASLNLHGTRSVQKIVESKKQ-DTAAKILTDALEPSAARL 122
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ I + L FI+ A +A H GC + +D+ R
Sbjct: 123 CIDSHGNHAIQRILLKLPYQYTQFIFDAVAASVEDVARHRHGCCVIQRCLDSRHSVARSH 182
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ I + L + GNYVVQ+VL + + AIC ++ G L++ K S V++K
Sbjct: 183 LVTRIVEKSLELMQDAYGNYVVQYVLDVCGDDEVHAICESVIGRVCLLAIQKFSSNVMEK 242
Query: 251 CLKYQNAVHYIIEELLN----SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ---RL 303
CL + + EE LN SD++ ++ D +GNYV+Q AL+ +S H RL
Sbjct: 243 CL--ERCTDRVREEYLNELNDSDRLRELMMDPFGNYVVQRALS-------VSTHAQAIRL 293
Query: 304 VTKLQQH 310
V ++ H
Sbjct: 294 VETMKPH 300
>gi|285026237|dbj|BAI68041.1| Pumilio2 [Danio rerio]
Length = 1206
Score = 81.3 bits (199), Expect = 6e-13, Method: Composition-based stats.
Identities = 77/343 (22%), Positives = 149/343 (43%), Gaps = 42/343 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L S +F + ++LM+ +G +V KF E +
Sbjct: 847 MVEFSQDQHGSRFIQQKLERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 906
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ ++ ++ ++ L +
Sbjct: 907 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKD 963
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 964 QNGNHVVQKCIECVQPQAFQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILE 1023
Query: 194 LI------------------------SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
+ +V++ +L + + GNYV+QHVL P I
Sbjct: 1024 ELHQHFEQLGQKYQGVSLEMTPQTYYTVSSDALFKDQYGNYVIQHVLEHGRPEDKSKIVA 1083
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNY 282
+RG + LS K S VV+KC+ + + +I+E+ + + D+Y NY
Sbjct: 1084 EVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANY 1143
Query: 283 VIQTA--LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
V+Q +AE Q ++ +H K++ H+A LR YG ++
Sbjct: 1144 VVQRMIDMAEPA-QRKIIMH-----KIRPHIATLRKYTYGKHI 1180
>gi|431891161|gb|ELK02038.1| Pumilio like protein 1 [Pteropus alecto]
Length = 1349
Score = 81.3 bits (199), Expect = 6e-13, Method: Composition-based stats.
Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 34/324 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 885 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 944
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 945 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 998
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 999 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1052
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 1053 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1112
Query: 247 VVQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRL 297
VV+KC+ + + +I+E+ + + + D+Y NYV+Q + AE Q ++
Sbjct: 1113 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKI 1171
Query: 298 SVHQRLVTKLQQHLAALRVMKYGS 321
+H K++ H+A LR YG+
Sbjct: 1172 VMH-----KIRPHIATLRKYTYGT 1190
>gi|8071634|gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus
tremuloides]
Length = 966
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 142/302 (47%), Gaps = 22/302 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + + +F V +LM+ +G +V KF E + Q +
Sbjct: 675 DQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQRIELA 734
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K++ Q L S+ +G ++K ++V+ L + L +M + G
Sbjct: 735 EKLSGQ---ILQLSLQMYGCRVIQKALEVIE-----LDQKAKLAQELDGHVMRCVHDQNG 786
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 195
+ VI +C+E +FI A + L+ H GC + +++ + Q I+ I
Sbjct: 787 NHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIVDEI 846
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
++ L++ + GNYV QHVL P I L G V +S K S VV+KCLK+
Sbjct: 847 LESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKCLKHA 906
Query: 256 NA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+A + II + ++D +L + D++ NYV+Q L ET + + L++++
Sbjct: 907 DATERELMIGEIIGQSEDNDNLLIMMKDQFANYVVQKIL-ETSNDKQKEI---LLSRINA 962
Query: 310 HL 311
HL
Sbjct: 963 HL 964
>gi|47208830|emb|CAF90334.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1182
Score = 80.9 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 75/325 (23%), Positives = 144/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 848 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 907
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 908 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSEQQSDIVRELDGHVLKCVK--- 961
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 962 -----DQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTQEQ 1016
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + ++ L + + GNYV+QHVL P I +RG + LS K +
Sbjct: 1017 TLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFARTL 1076
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLS 298
+KC+ + + +I+E+ + + D+Y NYV+Q +AE Q ++
Sbjct: 1077 WEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEPA-QRKII 1135
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1136 MH-----KIRPHIATLRKYTYGKHI 1155
>gi|330797119|ref|XP_003286610.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
gi|325083435|gb|EGC36888.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
Length = 332
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 22/321 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ ++DQ GS+ +Q+ + + +F V LM+ +G +V KF E
Sbjct: 12 IAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFFEHGTTE 71
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q ++ K++ L ++ +G ++K I+ + +L ++ L +
Sbjct: 72 QKRILADKLSGH---ILSLTLQMYGCRVIQKAIESIELDKQIL--LIGELNGHIVQCVTD 126
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +C+E + FI + H LA H GC + +++ S+ IL
Sbjct: 127 QNGNHVIQKCIEKIPTNLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAESQVAPILD 186
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ A SL + + GNYV+QHVL AI + L+G +LS K S V++KC++
Sbjct: 187 ELMRCAVSLVQDQYGNYVIQHVLENGSQRDKTAIVYKLQGQIYNLSQHKFASNVIEKCVQ 246
Query: 254 YQNAVH--YIIEELL-------NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR-- 302
+ + II E+L +S+ +L++ D Y NYVIQ L D + QR
Sbjct: 247 HGVSSERILIINEILGDINAPNSSNVLLKILKDPYANYVIQKIL------DIVEPSQRDV 300
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
++ ++Q + L+ + G ++
Sbjct: 301 IINRIQPFIPTLKKVTPGKHI 321
>gi|327355572|gb|EGE84429.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 906
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 27/325 (8%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L S +S D++F + + +LM+ +G +V K E
Sbjct: 491 NH-IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHG 549
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 550 NQSQKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 601
Query: 131 MM---TKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI + +E P+ + + FI A A H GC + +++ K
Sbjct: 602 LKCVNDQNGNHVIQKAVERVPTVHIR--FIINAFKGQVHQWAAHSYGCRVIQRMLEHCKE 659
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
R+ IL + AASL GNYV+QHV+ + I + + S K S
Sbjct: 660 PDRQAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFAS 719
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLS 298
VV+K +++ + I+ +L + +L + D+YGNYV+QT L E +R
Sbjct: 720 NVVEKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPER-- 777
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+ LV +++ L L+ YG +
Sbjct: 778 --EALVKQIELQLPELKKTNYGKQI 800
>gi|195055380|ref|XP_001994597.1| GH15257 [Drosophila grimshawi]
gi|193892360|gb|EDV91226.1| GH15257 [Drosophila grimshawi]
Length = 805
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 156/322 (48%), Gaps = 22/322 (6%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 389 TNH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEF 447
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 448 GTPEQKNNLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PDQQQEIVHELDGHVLK 502
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E F+ A L+ H GC + +++ +
Sbjct: 503 CVKDQNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTT 562
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGS 245
IL + + +L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 563 PILDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFAS 618
Query: 246 FVVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L +
Sbjct: 619 NVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---K 674
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
+L+TK++ H+AALR YG ++
Sbjct: 675 KLMTKIRPHMAALRKYTYGKHI 696
>gi|349916591|dbj|GAA27968.1| pumilio homolog 1 [Clonorchis sinensis]
Length = 1618
Score = 80.9 bits (198), Expect = 8e-13, Method: Composition-based stats.
Identities = 83/355 (23%), Positives = 147/355 (41%), Gaps = 55/355 (15%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + AQDQ GS+++Q+ L + +F + + LM +G +V KF E
Sbjct: 1026 TNH-IVEFAQDQYGSRFIQQKLEQASAVDKTAVFREILPHAYSLMVDVFGNYVIQKFFEL 1084
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV--MSALKRLF 127
Q ++ +I Q L S+ +G ++K ++ V PL V + L
Sbjct: 1085 GTPEQKQILGQRIRGQ---VLTLSLQMYGCRVIQKAVESV----PLDMQVAIIRELDGCV 1137
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ V+ +C+E FI + + ++ H GC + +++ +
Sbjct: 1138 IKCVKDQNGNHVVQKCIESVPPEHLQFIVDSFTNNVQSISTHSYGCRVIQRILEHCTPEQ 1197
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + SL + + GNYV+QHVL I ++G +LS+ K S V
Sbjct: 1198 TAPILAELHQHTESLVKDQYGNYVIQHVLEHGKTEDKSRIVDLIKGRVAELSVHKFASNV 1257
Query: 248 VQKCLKYQNAV----HYIIEELL-----------------------------------NS 268
V+K + NA H +I E+L N+
Sbjct: 1258 VEKAVA--NATRAERHSLINEVLESNYPTDPNDRPRSGDFLALSGSSDGGGSADEPHGNT 1315
Query: 269 DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ + D+Y NYV+Q L + Q + + L+ +++ HL +LR YG ++
Sbjct: 1316 SILCMMMKDQYANYVVQKML-DVAEQ---PIRKELMNQIRPHLNSLRKYTYGKHI 1366
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 12/205 (5%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM+ G+ VI + E + + Q L L+ GC + ++++ +
Sbjct: 1068 LMVDVFGNYVIQKFFELGTPEQKQILGQRIRGQVLTLSLQMYGCRVIQKAVESVPLDMQV 1127
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I+ + + ++GN+VVQ + P + I + + +S G V+Q
Sbjct: 1128 AIIRELDGCVIKCVKDQNGNHVVQKCIESVPPEHLQFIVDSFTNNVQSISTHSYGCRVIQ 1187
Query: 250 KCLKY----QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ L++ Q A I+ EL + L D+YGNYVIQ L +D+ R+V
Sbjct: 1188 RILEHCTPEQTAP--ILAELHQHTESL--VKDQYGNYVIQHVLEHGKTEDK----SRIVD 1239
Query: 306 KLQQHLAALRVMKYGSNVYKWTTAS 330
++ +A L V K+ SNV + A+
Sbjct: 1240 LIKGRVAELSVHKFASNVVEKAVAN 1264
>gi|345317188|ref|XP_001506884.2| PREDICTED: pumilio homolog 2-like [Ornithorhynchus anatinus]
Length = 429
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 143/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 96 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 155
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 156 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISPDQQNEMVKELDGHVLKCVK--- 209
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 210 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 264
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 265 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 324
Query: 248 VQKCLKYQNAVHY--IIEEL-LNSD----QILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ SD + + D+Y NYV+Q + D
Sbjct: 325 VEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 378
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H++ LR YG ++
Sbjct: 379 QRKIIMHKIRPHISTLRKYTYGKHI 403
>gi|260813527|ref|XP_002601469.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
gi|229286765|gb|EEN57481.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
Length = 734
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 148/326 (45%), Gaps = 25/326 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E
Sbjct: 395 NH-VVEFSQDQHGSRFIQQKLERATPAEKQMVFNEILSAAYQLMTDVFGNYVIQKFFEFG 453
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLL---YHVMSALKRLF 127
Q + KI + + LA + +G ++K ++ + PP L Y V +K L
Sbjct: 454 TPEQKNALAQKI--RGHVLPLA-LQMYGCRVIQKALECI---PPDLKFSYQV-ELVKELD 506
Query: 128 KFLMM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
++ + G+ V+ +C+E + FI A L+ H GC + +++
Sbjct: 507 GHVLKCVKDQNGNHVVQKCIECVDPSELQFIIDAFRGQVFALSTHPYGCRVIQRILEHCT 566
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+ IL + N L + + GNYV+QHVL P I LRG + LS K
Sbjct: 567 VEQTIPILEELHENTERLVQDQYGNYVIQHVLEHGRPEDKSKIVNELRGKVLALSQHKFA 626
Query: 245 SFVVQKCLKYQNAVH--YIIEELLN-----SDQILQVANDKYGNYVIQTALAETMRQDRL 297
S VV+KC+ + + +I+E+ + + + D++ NYV+Q + Q R
Sbjct: 627 SNVVEKCVSHSSRAERAMLIDEVCSYCDGTHSALYTMMKDQFANYVVQKMIDVAEPQQR- 685
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ K++ H+A LR YG ++
Sbjct: 686 ---KILMHKIRPHIATLRKYTYGKHI 708
>gi|367049768|ref|XP_003655263.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
gi|347002527|gb|AEO68927.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
Length = 916
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 149/315 (47%), Gaps = 29/315 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++QE L S + D++F + LM +G +V KF E ++
Sbjct: 516 VVEFSSDQSGSRFIQEKLESANGDEKDQVFREIEPNAVPLMKDLFGNYVIQKFFEHGDQI 575
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL--M 131
Q +++ + + + S+ + V+K ++ V L+ +K L + +
Sbjct: 576 QKKVLLRAMKGK---VMDLSMQMYACRVVQKALENV-----LVEQQAELVKELEADVVKV 627
Query: 132 MTKP-GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
T P G+ V+ Q + FI A LA + C + +++ + +
Sbjct: 628 ATDPHGNHVVQQAIALVPRQHIGFIIGAFKGRVCELASQQYACRVIQRILEHGTEADKAA 687
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVL---SLED-PFLIDAICFALRGHYVDLSLTKCGSF 246
+ + +A +L +H GNYV+QHVL ED +ID + L V LS +KC S
Sbjct: 688 VTQELHKSAETLIKHPYGNYVIQHVLHHGRAEDRSKIIDVVMADL----VALSKSKCASN 743
Query: 247 VVQKCLKY-----QNAV-HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVH 300
VV+KC+ + Q A+ ++ + ++ + Q+A D+YGNYV+Q +A + Q +
Sbjct: 744 VVEKCIAFGTREEQRAIWDRLVADGEDNCPLFQLAKDQYGNYVVQKLIALPVDQHK---- 799
Query: 301 QRLVTKLQQHLAALR 315
+ L+ KL+ HL ++R
Sbjct: 800 EALLQKLKAHLQSVR 814
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + +++ G + Q+ I NA L + GNYV+Q D
Sbjct: 515 HVVEFSSDQSGSRFIQEKLESANGDEKDQVFREIEPNAVPLMKDLFGNYVIQKFFEHGDQ 574
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLK----YQNAVHYIIEELLNSDQILQVAND 277
+ A++G +DLS+ VVQK L+ Q A +++EL +++VA D
Sbjct: 575 IQKKVLLRAMKGKVMDLSMQMYACRVVQKALENVLVEQQA--ELVKEL--EADVVKVATD 630
Query: 278 KYGNYVIQTALAETMRQ 294
+GN+V+Q A+A RQ
Sbjct: 631 PHGNHVVQQAIALVPRQ 647
>gi|261196167|ref|XP_002624487.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
gi|239587620|gb|EEQ70263.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
Length = 932
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 27/325 (8%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L S +S D++F + + +LM+ +G +V K E
Sbjct: 517 NH-IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHG 575
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 576 NQSQKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 627
Query: 131 MM---TKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI + +E P+ + + FI A A H GC + +++ K
Sbjct: 628 LKCVNDQNGNHVIQKAVERVPTVHIR--FIINAFKGQVHQWAAHSYGCRVIQRMLEHCKE 685
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
R+ IL + AASL GNYV+QHV+ + I + + S K S
Sbjct: 686 PDRQAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFAS 745
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLS 298
VV+K +++ + I+ +L + +L + D+YGNYV+QT L E +R
Sbjct: 746 NVVEKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPER-- 803
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+ LV +++ L L+ YG +
Sbjct: 804 --EALVKQIELQLPELKKTNYGKQI 826
>gi|403333004|gb|EJY65564.1| Pumilio domain-containing protein [Oxytricha trifallax]
Length = 1075
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 7/283 (2%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
LA Q+GS++LQ+ ++ +S I+ +S +LM YG + + SC+ Q
Sbjct: 705 LALTQKGSRFLQKQVTKANSGIVAYFLNEISPHLCDLMIDNYGNYFCQSLLSSCSGEQRL 764
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
I+ I + F+ D+ G+ +++ + ++V +LP + AL L G
Sbjct: 765 SILRAIQPK---FIEICCDRKGTHTIQTMFELV-NLPEEEDFIRDALMGNVIRLSKDPQG 820
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLI 195
+ V+ + + HK FIY+ + + LA + G + + K + + IL +
Sbjct: 821 THVVQKVMASFPEHKRAFIYEEVFDQFIELAKNNNGLCVVKKLVQFTKNTDQAVILMKRL 880
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
NA L + GNY V ++ +P + I LR LS K S V++KCL+
Sbjct: 881 QENAIDLVQDPFGNYAVTEIVVKWEPEVCRPIFEVLRSRISQLSSQKFSSNVIEKCLERA 940
Query: 256 NAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDR 296
+ +I EL SD++ + ++YGNYV+Q AL ++ Q++
Sbjct: 941 DEQMRAGLIVELAYSDRLTSLIRNQYGNYVVQKALKLSLGQEK 983
>gi|358391961|gb|EHK41365.1| hypothetical protein TRIATDRAFT_147678 [Trichoderma atroviride IMI
206040]
Length = 415
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 22/289 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +S +++F + +LM +G +V KF E SQL I
Sbjct: 35 DQHGSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNYVVQKFFEYG--SQLQKKI 92
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLMMTKPGS 137
L + ++ L SV + V+K ++ +V L + + R+ K + G+
Sbjct: 93 LAEKMKGKVVDL-SVQVYACRVVQKALEHILVEQQAELTRELEPEILRVIK----DQNGN 147
Query: 138 SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 197
V+ + +E DFI A LA H GC + +++ + +I+ +
Sbjct: 148 HVVQKIIELVPRQYIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEEDKAEIMGELHA 207
Query: 198 NAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY 254
+A L + GNYV QHV+ LED + I + G + LS K S VV+KC+++
Sbjct: 208 SAQILITDQYGNYVAQHVIQNGELEDR---ERIIQLVMGQLLTLSKHKFASNVVEKCIEF 264
Query: 255 QN-AVHYIIEELLNS------DQILQVANDKYGNYVIQTALAETMRQDR 296
A I E L + + + Q+ D++GNYVIQ L + ++R
Sbjct: 265 GTPAQRTTIREQLTTAGPDGNNPLQQMMRDQFGNYVIQKMLGQLQGEER 313
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 188 RKQILHLISVNAASLSRH-----------RSGNYVVQHVLSLEDPFLIDAICFALRGHYV 236
+K + H++ A L+R ++GN+VVQ ++ L ID I A+RG
Sbjct: 115 QKALEHILVEQQAELTRELEPEILRVIKDQNGNHVVQKIIELVPRQYIDFIMNAVRGQVT 174
Query: 237 DLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQ 294
L+ G V+Q+ L++ + I+ EL S QIL D+YGNYV Q + +
Sbjct: 175 PLASHAYGCRVIQRLLEHGTEEDKAEIMGELHASAQIL--ITDQYGNYVAQHVIQNGELE 232
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
DR +R++ + L L K+ SNV
Sbjct: 233 DR----ERIIQLVMGQLLTLSKHKFASNV 257
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ ++QI I NA L + GNYVVQ
Sbjct: 28 HAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNYVVQKFFEYGSQ 87
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLN-----SDQILQVAN 276
+ ++G VDLS+ VVQK L+ H ++E+ +IL+V
Sbjct: 88 LQKKILAEKMKGKVVDLSVQVYACRVVQKALE-----HILVEQQAELTRELEPEILRVIK 142
Query: 277 DKYGNYVIQTALAETMRQ 294
D+ GN+V+Q + RQ
Sbjct: 143 DQNGNHVVQKIIELVPRQ 160
>gi|440491702|gb|ELQ74316.1| Translational repressor Pumilio/PUF3, RNA-binding proteins (Puf
superfamily) [Trachipleistophora hominis]
Length = 557
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 151/324 (46%), Gaps = 33/324 (10%)
Query: 4 IAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTF-ELMSGQYGRFV 62
+ + CTN + +DQEGS+++Q+ L ++ W+V EL +G +V
Sbjct: 255 VDIDTCTN-----IVKDQEGSRFIQKRLELSTE---EEWIWLVKHIRIKELCIDLFGNYV 306
Query: 63 FGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYH-VMS 121
K IE N I + + + SV+ FG V++L+ + Y +
Sbjct: 307 IQKLIE--NRECHGYIT---QYLEGCYKEMSVNAFGCRVVQRLLDEDVNEESEYYRRIAD 361
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
LK L+ G+ V+ + +E + +N F C+ L+ H+ GC L +
Sbjct: 362 ELKAHILDLVYDSNGNHVVQKIVERKIDFENVF-----YNDCIQLSNHKYGCRVLQKLFE 416
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ S I++ + N L+ ++ GNYV+QH+++++ +L+ + L + SL
Sbjct: 417 KNESS---TIINKLIDNCLDLAENQYGNYVLQHIITIKHEYLV-RVSDILSPYIFSFSLH 472
Query: 242 KCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
K S V++K +K + ++ I+++LL ++ I++++ DKY NYV+Q L R
Sbjct: 473 KFASNVIEKIIKMCDEKQLNGILDDLLANNSIVKMSMDKYANYVVQRILESKSR------ 526
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+R+V L ++ LR Y +
Sbjct: 527 -ERVVNVLMANINELRNCVYSKQI 549
>gi|430812324|emb|CCJ30264.1| unnamed protein product [Pneumocystis jirovecii]
Length = 738
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 155/332 (46%), Gaps = 28/332 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F + + +LM+ +G +V KF+E ++
Sbjct: 408 IVEFSGDQHGSRFIQQALEGASAEDKEIVFQEIFPNSLQLMTDVFGNYVIQKFMEHGDQM 467
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q L++ ++ L S+ +G V+K ++ + + +S +K L ++
Sbjct: 468 QKTLLLEQMKGH---VLTLSLQTYGCRVVQKALEYIQ-----IDQKISLVKELNGNVLKC 519
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + +E F+ LA H GC + ++ S+ +
Sbjct: 520 IKNQNGNHVIQKIIEKVPIEHIQFLINTFQGQIYVLATHPYGCRVIQRMLEYC--SQTRD 577
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ + + A +L R + GNY +QH++ +P I ++G+ S K S VV+K
Sbjct: 578 LIKELHLYAQNLIRDQYGNYCIQHIIEKGEPEDRSKIISVVKGNVFRFSRHKFASNVVEK 637
Query: 251 CLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
C+ Y +I+E++ S++ +L + D+Y NYVI+ AL R +L
Sbjct: 638 CITYGTDEEKKLLIDEIIESNENGMSFLLPMIKDQYANYVIKKALDVACDDQR----NKL 693
Query: 304 VTKLQQHLAALRVMKYG----SNVYKWTTASH 331
+++++ HL L+ +G SN+ + T S+
Sbjct: 694 ISEIKPHLQFLKKNVHGKALSSNIERLITLSN 725
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ ++ + I N+ L GNYV+Q + D
Sbjct: 407 HIVEFSGDQHGSRFIQQALEGASAEDKEIVFQEIFPNSLQLMTDVFGNYVIQKFMEHGDQ 466
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYI--IEELLNSDQILQVANDKY 279
+ ++GH + LSL G VVQK L+Y I ++EL + +L+ ++
Sbjct: 467 MQKTLLLEQMKGHVLTLSLQTYGCRVVQKALEYIQIDQKISLVKEL--NGNVLKCIKNQN 524
Query: 280 GNYVIQTALAETMRQDRLSVH--QRLVTKLQQHLAALRVMKYGSNV 323
GN+VIQ + +++ + Q L+ Q + L YG V
Sbjct: 525 GNHVIQKII------EKVPIEHIQFLINTFQGQIYVLATHPYGCRV 564
>gi|322707325|gb|EFY98904.1| hypothetical protein MAA_06043 [Metarhizium anisopliae ARSEF 23]
Length = 852
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 29/318 (9%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH L + DQ GS+++Q+ L S +S D++F + +LM +G +V KF E
Sbjct: 459 NH-LVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHG 517
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFK 128
N+ Q ++ K+ + + SV + V+K ++ +V L + + R+ +
Sbjct: 518 NQVQKKVLAEKMKGK---VVDLSVQVYACRVVQKALEHVLVEQQAELTKELEPEILRVIR 574
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ + +E DFI A LA H GC + +++ S +
Sbjct: 575 ----DQNGNHVVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDK 630
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF----LIDAICFALRGHYVDLSLTKCG 244
+I+ + +A L + GNYV QHV+ P +ID + L + LS K
Sbjct: 631 MEIMMELHASAQILITDQYGNYVAQHVIQNGKPEDRAQMIDLVMSQL----LTLSKHKFA 686
Query: 245 SFVVQKCLKYQNAVHY--IIEEL--LNSD---QILQVANDKYGNYVIQTALAETMRQDRL 297
S VV+KC+++ A I E+L + SD + Q+ D+YGNYVIQ L + ++R
Sbjct: 687 SNVVEKCIEHGTAEQRTSIREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLLGQLEGRER- 745
Query: 298 SVHQRLVTKLQQHLAALR 315
+ LV +++ AL+
Sbjct: 746 ---EMLVEEIKPQFYALK 760
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 19/213 (8%)
Query: 87 QLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEP 146
Q F A + +G V + A+LPP+ R + K SV+L
Sbjct: 394 QNFRNAMMSGYGIPPVPSAYSLAANLPPV---------RPSRDQDPGKGVRSVLLDEFRL 444
Query: 147 SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 206
S + + H + + + G + +++ + Q+ I NA L +
Sbjct: 445 SNKSNKRYELKDIYNHLVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDV 504
Query: 207 SGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELL 266
GNYVVQ + + ++G VDLS+ VVQK L+ H ++E+
Sbjct: 505 FGNYVVQKFFEHGNQVQKKVLAEKMKGKVVDLSVQVYACRVVQKALE-----HVLVEQQA 559
Query: 267 N-----SDQILQVANDKYGNYVIQTALAETMRQ 294
+IL+V D+ GN+V+Q + RQ
Sbjct: 560 ELTKELEPEILRVIRDQNGNHVVQKIIELVPRQ 592
>gi|239614575|gb|EEQ91562.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ER-3]
Length = 932
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 27/325 (8%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L S +S D++F + + +LM+ +G +V K E
Sbjct: 517 NH-IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHG 575
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 576 NQSQKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 627
Query: 131 MM---TKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI + +E P+ + + FI A A H GC + +++ K
Sbjct: 628 LKCVNDQNGNHVIQKAVERVPTVHIR--FIINAFKGQVHQWAAHSYGCRVIQRMLEHCKE 685
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
R+ IL + AASL GNYV+QHV+ + I + + S K S
Sbjct: 686 PDRQAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFAS 745
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLS 298
VV+K +++ + I+ +L + +L + D+YGNYV+QT L E +R
Sbjct: 746 NVVEKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPER-- 803
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+ LV +++ L L+ YG +
Sbjct: 804 --EALVKQIELQLPELKKTNYGKQI 826
>gi|170063110|ref|XP_001866961.1| pumilio [Culex quinquefasciatus]
gi|167880847|gb|EDS44230.1| pumilio [Culex quinquefasciatus]
Length = 852
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 149/324 (45%), Gaps = 26/324 (8%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 446 TNH-IVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEF 504
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSAL 123
+ Q + ++ + + LA + +G ++K ++ + + L HV+ +
Sbjct: 505 GSPEQKQALAQQV--KGHVLPLA-LQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCV 561
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K + G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 562 K--------DQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHC 613
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ IL + N L + + GNYV+QHVL P + A+RG + LS K
Sbjct: 614 TQEQTAPILGELHANTEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKF 673
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLN-SDQILQV-ANDKYGNYVIQTALAETMRQDRLSV 299
S VV+KC+ + +IEE+ + +D L V D+Y NYV+Q + + R
Sbjct: 674 ASNVVEKCVTHATRAERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSEPTQR--- 730
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ K++ H+ +L+ YG ++
Sbjct: 731 -KVLLHKIRPHMNSLKKYTYGKHI 753
>gi|356538980|ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + ++ + LM+ +G +V KF E S
Sbjct: 716 VVEFSADQYGSRFIQQKLETATTEEKKMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAS 775
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ L S+ +G ++K I+VV L + ++ L +M
Sbjct: 776 QRRELANKLLGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 827
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E DFI + + L+ H GC + +++ + +Q
Sbjct: 828 VRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCEDPTTQQ 887
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I + L++ + GNYVVQHVL +I L G V +S K S VV+
Sbjct: 888 KVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSSIIKELAGKIVQMSQQKFASNVVE 947
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 948 KCLTFGGPSERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 1003
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++++ HL AL+ YG ++
Sbjct: 1004 LSRIKVHLNALKKYTYGKHI 1023
>gi|39644512|gb|AAH24218.2| PUM2 protein, partial [Homo sapiens]
Length = 489
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 154 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 213
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ ++ ++ L +
Sbjct: 214 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 270
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 271 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 330
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 331 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 390
Query: 254 YQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 391 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 444
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 445 HKIRPHITTLRKYTYGKHI 463
>gi|303280035|ref|XP_003059310.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459146|gb|EEH56442.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 429
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 152/328 (46%), Gaps = 33/328 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +F V LM+ +G +V KF+ +
Sbjct: 25 VVEFSSDQHGSRFIQQKLETAAPEDAQLVFDEVLPAAHALMTDVFGNYVVQKFLANGTPE 84
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLF 127
Q+ I ++ L S+ +G ++K ++V+ A + L HV ++
Sbjct: 85 QIDAIAGELKGH---VLSLSLQMYGCRVIQKALEVIDEDAQCALVAELEGHVSRCVR--- 138
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGC-----INLNNFIDN 182
+ G+ V+ +C+E K FI +A + L L+ H GC +++ +++
Sbjct: 139 -----DQNGNHVVQKCIECVAPAKIQFIVEAFYGNVLSLSTHPYGCRVIQARSIHWVLEH 193
Query: 183 MKGSRRKQ-ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
++ + I+ I A SL++ + GNYVVQHVL I L G V L+
Sbjct: 194 CTPEQKSEGIMDEILREATSLAQDQYGNYVVQHVLQHGGEGERKTILQTLAGQIVLLAQH 253
Query: 242 KCGSFVVQKCLKYQNAVHY--IIEELL---NSDQILQ-VANDKYGNYVIQTALAETMRQD 295
K S V++KCL Y A +I+E+L + ++ LQ + D++ NYV+Q L
Sbjct: 254 KFASNVIEKCLTYCGASERQIMIDEMLGKTDENEPLQAMMKDQFANYVVQKLLEVCDDGQ 313
Query: 296 RLSVHQRLVTKLQQHLAALRVMKYGSNV 323
R +L+T+++ HL L+ YG ++
Sbjct: 314 R----DQLLTRMRVHLGNLKKFTYGKHI 337
>gi|410075265|ref|XP_003955215.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
gi|372461797|emb|CCF56080.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
Length = 493
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 145/311 (46%), Gaps = 24/311 (7%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+++ +LA D + + LQ L + +D ++ ++ L+ YG + K I S +
Sbjct: 161 NEIINLATDYQTCKILQSYLDKLNRHEIDVIYKIIEKDIIGLILNSYGNYFIQKLIISVS 220
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
++ I Q F + D G+ ++ L+ V + + L +F
Sbjct: 221 LENRVNLLKTIAGQ---FNSIATDIHGTRVIQSLVDCVETIQEQEQIIKLIDNDLIQFCH 277
Query: 132 MTKPGSSVILQCLEPSYNHKNDF-IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
P S+ I+Q + ++ + IYQ L++C+ ++ + GC + ID ++
Sbjct: 278 --DPNSNHIIQKILAKFDPEALIGIYQIMLQNCISISKDKFGCCIIQRCIDYGTSNQVAT 335
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLED-----PFLIDAICFALRGHYVDLSLTKCGS 245
++ I NA SLS GNYV+Q+++ +E + D I L+G +S K S
Sbjct: 336 LIGHIVKNAESLSFDAYGNYVIQYIIKMEQNIYSCKYTFD-ILNNLKGKLTTISNHKFSS 394
Query: 246 FVVQKCLKYQNAVHYIIEELL---------NSDQILQVANDKYGNYVIQTALAETMRQDR 296
+++ LK N II+E L NS +L NDKYGNYV+QTALA + RQ+
Sbjct: 395 NIIELLLKNPNVADVIIKEFLSYGAKGNTFNSINVL--LNDKYGNYVLQTALASS-RQNN 451
Query: 297 LSVHQRLVTKL 307
+ ++ +LV K+
Sbjct: 452 ILLYNQLVNKI 462
>gi|356542325|ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1033
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 145/320 (45%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E S
Sbjct: 702 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAS 761
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ L S+ +G ++K I+VV L + ++ L +M
Sbjct: 762 QKRELANKLLGH---VLALSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 813
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E FI + + L+ H GC + +++ K +Q
Sbjct: 814 VRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQ 873
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I + L++ + GNYVVQHVL P +I L G V +S K S VV+
Sbjct: 874 KVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELAGKIVQMSQQKFASNVVE 933
Query: 250 KCLKYQNAVHY---IIEELLNSDQ---ILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + + E L +D+ + + D++ NYV+Q L Q R + +
Sbjct: 934 KCLTFGGPSERQLLVCEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 989
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ +++ HL AL+ YG ++
Sbjct: 990 LYRIKVHLNALKKYTYGKHI 1009
>gi|321248782|ref|XP_003191239.1| RNA binding protein Pumilio [Cryptococcus gattii WM276]
gi|317457706|gb|ADV19452.1| Pumilio-like protein 2 (Pumilio-2) [Cryptococcus gattii WM276]
Length = 673
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 145/322 (45%), Gaps = 36/322 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q+ L S KLF + ++LM+ +G +V K E ++
Sbjct: 298 IVEFAGDQHGSRFIQQKLEIATSEDRQKLFDEIYPNAYQLMTDVFGNYVTQKMFEHGDQL 357
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLI---------KVVAHLPPLLYHVMSALK 124
Q A + K+ D L S+ +G V+K + K+VA L P H++ +K
Sbjct: 358 QKAALAKKM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEP---HILECVK 411
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
++ + + + P + + FI H LA H GC L +N++
Sbjct: 412 SSNANHVVQR------MINIGPPQSIPDSFI-----GHVEELAKHPYGCRVLQKAFENLE 460
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
++ +L + L+ + GNYV+Q V+++ +P + I L+G L+ K
Sbjct: 461 DKMKRSLLDEMHECVIPLTEDQFGNYVIQSVITVGEPEDRNKIINQLKGRITTLARHKFA 520
Query: 245 SFVVQKCLKYQNAV--HYIIEELLN-----SDQILQVANDKYGNYVIQT---ALAETMRQ 294
S VV+K L + + +I+EL++ ++Q+ + D Y N+ +QT A T R+
Sbjct: 521 SNVVEKALIHADPADRRVLIKELIDMQPDGTNQVGMLLRDAYANFPLQTGMFAAEPTQRE 580
Query: 295 DRLSVHQRLVTKLQQHLAALRV 316
+ L + L+ L+ R+
Sbjct: 581 ELLEIVLPLLPPLRHTPVGKRI 602
>gi|242556581|pdb|3GVO|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556583|pdb|3GVT|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556584|pdb|3GVT|B Chain B, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
Length = 351
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 28 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 87
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 88 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 141
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 142 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 196
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 197 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 256
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + + + D+Y NYV+Q + D
Sbjct: 257 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 310
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 311 QRKIIMHKIRPHITTLRKYTYGKHI 335
>gi|260949221|ref|XP_002618907.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
gi|238846479|gb|EEQ35943.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
Length = 752
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 156/296 (52%), Gaps = 30/296 (10%)
Query: 14 LFSLAQDQEGSQYLQENL-----SSGDSR--ILDKLFWVVSGFTFELMSGQYGRFVFGKF 66
+F LA+DQ G ++LQ+ + S+ +R + +F V +EL+ +G ++ K
Sbjct: 136 IFRLAKDQHGCRFLQKRIDENVVSNSQTREANFEVIFEQVHPILYELIIDPFGNYLIQKL 195
Query: 67 IESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRL 126
I+ C+E+ L LI+ + F LF + S+++ G+ +++K+I ++ L ++ LK
Sbjct: 196 IDYCDETNLNLILETLQFN--LFSI-SINQHGTRALQKVIDRMSSDYQLSL-LIKGLKPY 251
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L+ G+ VI + L Y+ +N FIY + ++ L +A H+ GC L ++++
Sbjct: 252 IIELIKDLNGNHVIQKILN-KYSPENCQFIYDSIIQDLLVVATHKHGCCVLQKCLNHVNP 310
Query: 186 SRRKQI-LHLISVNA-ASLSRHRSGNYVVQHVLSLEDPFLIDAICFA--LRGHYVDLSLT 241
S+ Q +++ N L + GNYV+Q+++S+ D I+ ++ +R DL +
Sbjct: 311 SQLMQFSTNILKYNVFMKLVNDQFGNYVLQYLISI-DSIDINGQLYSNFVRFGVSDLCKS 369
Query: 242 KCGSFVVQKCLK-----------YQNAVHYIIEELLNSDQILQVANDKYGNYVIQT 286
K S VV+K ++ + N ++ ++L+SD + ++ ND YGNYVIQT
Sbjct: 370 KFSSNVVEKLMRNCFNNEFKSVEFSNLKFSLVSQILSSD-LNKLINDPYGNYVIQT 424
>gi|255648502|gb|ACU24710.1| pumilo [Bombyx mori]
Length = 309
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 10/283 (3%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
NH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 16 ANH-IVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEF 74
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
Q + K+ L ++ +G ++K ++ + P V+ L
Sbjct: 75 GTTEQKTTLAQKVRGH---VLNLALQMYGCRVIQKALESIP--PEQQQEVVRELDGHVLK 129
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 130 CVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPEQTA 189
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+L+ + + L + GNYVVQHVL + A+RG + LS K S VV+
Sbjct: 190 PVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVE 249
Query: 250 KCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTAL 288
KC+ + +N +I+EL N + + + D++ NYV+Q +
Sbjct: 250 KCVTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMI 292
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ VI + E + + Q H L LA GC + ++++ +++
Sbjct: 58 LMTDVFGNYVIQKFFEFGTTEQKTTLAQKVRGHVLNLALQMYGCRVIQKALESIPPEQQQ 117
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+++ + + + ++GN+VVQ + +P + I A G LS G V+Q
Sbjct: 118 EVVRELDGHVLKCVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQ 177
Query: 250 KCLKY--QNAVHYIIEEL-LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ L++ ++ EL ++DQ++ D+YGNYV+Q L +DR RLV
Sbjct: 178 RILEHCTPEQTAPVLNELHAHTDQLI---TDQYGNYVVQHVLEHGAGEDR----SRLVAA 230
Query: 307 LQQHLAALRVMKYGSNV 323
++ + L K+ SNV
Sbjct: 231 VRGKVLQLSQHKFASNV 247
>gi|401828248|ref|XP_003888416.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
gi|392999688|gb|AFM99435.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
Length = 529
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 142/311 (45%), Gaps = 18/311 (5%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
S+++DQEGS+ +Q + + + F ++ +L + +G +V K I E +
Sbjct: 223 SVSKDQEGSRCIQRKMDNISKEEISWFFNNIADAAADLSANLFGNYVIQKIIPLLTEEER 282
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
+ + Q L SV +G ++KL+ V + +L V L L + +
Sbjct: 283 TRLTASLVGQIHLL---SVHPYGCRVIQKLVDVSPDVDFILEEVKGNLLELIE----DQN 335
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +C+E + + I + E+ L+LA H+ GC + ++ K K I+ ++
Sbjct: 336 GNHVIQKCIEKCKDRR--IILKQFSENSLFLATHKYGCRVIQRMLEFCKEEEIKDIVEVL 393
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
N +L + GNYV+QH+L++ + + + +LS K S VV++C+K
Sbjct: 394 ISNIKTLVDDQYGNYVIQHILTVGKEKERNLVIEKIIEKSYELSKCKFSSNVVEQCVKLS 453
Query: 256 NA------VHYIIEELLNSDQILQVANDKYGNYVIQ---TALAETMRQDRLSVHQRLVTK 306
N + +E + + + D YGNYV+Q + E +R++ + + V
Sbjct: 454 NNGQREQFLEKFLEPVGAKPGMYSMCIDMYGNYVVQRLYDSSGENIRKEIKNTLRPFVRD 513
Query: 307 LQQHLAALRVM 317
L++ A ++
Sbjct: 514 LKKSPFARHIL 524
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 8/173 (4%)
Query: 151 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 210
KN F + E C+ ++ ++G + +DN+ + I+ AA LS + GNY
Sbjct: 209 KNVFGGTSMKEICISVSKDQEGSRCIQRKMDNISKEEISWFFNNIADAAADLSANLFGNY 268
Query: 211 VVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ 270
V+Q ++ L + +L G LS+ G V+QK + V +I+EE+ +
Sbjct: 269 VIQKIIPLLTEEERTRLTASLVGQIHLLSVHPYGCRVIQKLVDVSPDVDFILEEVKGN-- 326
Query: 271 ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+L++ D+ GN+VIQ + E + R+ ++ + ++ L KYG V
Sbjct: 327 LLELIEDQNGNHVIQKCI-EKCKDRRI-----ILKQFSENSLFLATHKYGCRV 373
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 166 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLID 225
L+ H GC + +D IL + N L ++GN+V+Q + I
Sbjct: 296 LSVHPYGCRVIQKLVD--VSPDVDFILEEVKGNLLELIEDQNGNHVIQKCIEKCKDRRII 353
Query: 226 AICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYV 283
F+ + L+ K G V+Q+ L++ + + I+E L+++ I + +D+YGNYV
Sbjct: 354 LKQFSENSLF--LATHKYGCRVIQRMLEFCKEEEIKDIVEVLISN--IKTLVDDQYGNYV 409
Query: 284 IQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
IQ L ++R V ++++ K + L K+ SNV
Sbjct: 410 IQHILTVGKEKERNLVIEKIIEKSYE----LSKCKFSSNV 445
>gi|167392700|ref|XP_001740261.1| pumilio [Entamoeba dispar SAW760]
gi|165895722|gb|EDR23351.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 525
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D S++++ GS+ +Q+++ G K++ + EL S + +V K +E E
Sbjct: 210 DYVSMSKEHNGSRTVQQSIEKGSEDERQKIWRALQDHIVELSSDLFANYVIQKALEFIPE 269
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
S+ ++ K+ L ++ +G V+K ++ V+ L + L++ +
Sbjct: 270 SR-HIVPQKMKGN---VLRLTLHMYGCRVVQKAVEYVSMKDRRL--LFEELRKSLVRCIE 323
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ VI +C+E I A L H GC + I+++ ++L
Sbjct: 324 DQNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELL 383
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+I ++ L+ + GNYVVQ+VL P I ++G+ V LS+ K S V++KC
Sbjct: 384 QVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCF 443
Query: 253 KY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
K+ N I+EE+ ++ ILQ+ D++ NYV+Q +
Sbjct: 444 KFATPNERQQILEEIYQNNGILQMMQDQFANYVVQKII 481
>gi|403332189|gb|EJY65091.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
gi|403345849|gb|EJY72304.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
Length = 1648
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 151/330 (45%), Gaps = 36/330 (10%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ L+ +Q GS++LQ L + + +I+ L + +M YG + + + +C+
Sbjct: 1013 NVIKLSINQTGSKFLQRLLDNANPQIVQFLLDEIQSHLPMVMVDNYGNYFCQELLINCSS 1072
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFK---- 128
+Q I+ +I+ F+ +K G+ +++K I +V + A ++ F+
Sbjct: 1073 AQRMQILERISVD---FVAICCNKKGTHTIQKFIDLVN---------LEAEEKFFQRVLA 1120
Query: 129 ----FLMMTKPGSSVI---LQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
L G+ VI ++C E S K F++ E + LA G + I
Sbjct: 1121 GHVALLSSDVQGTHVIQNIIKCFEES---KRQFVFDEIYEQFIELATDYSGLSVIKTIIS 1177
Query: 182 NM-KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
K RK+++ + NA L+++ GNY +Q D L I G LSL
Sbjct: 1178 KTHKPENRKRLMGKLVANAIELAQNPYGNYAIQQSFEHWDKELCQDIIPQFFGKVYQLSL 1237
Query: 241 TKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLS 298
KC S V+ KC++ + I++EL+N +++ + + YGN+V+Q AL ++++
Sbjct: 1238 QKCSSNVIDKCIQNSKPEYLAIIMQELINCERLNNLITNSYGNFVVQNALKFATQEEK-- 1295
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNVYKWTT 328
++L ++++++ + K KW T
Sbjct: 1296 --KKLSEQIEKNIPNISDSKIKQ---KWVT 1320
>gi|167389199|ref|XP_001738858.1| pumilio [Entamoeba dispar SAW760]
gi|165897686|gb|EDR24768.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 440
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 150/322 (46%), Gaps = 22/322 (6%)
Query: 4 IAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVF 63
I + N+ + L +DQ+GS+ +Q L++ + +LF + G +ELM+ +G +V
Sbjct: 117 IKIQQTNNYTVTDLCKDQQGSRRIQTFLTTAKEFEITELFDSIKGDLYELMNDLFGNYVV 176
Query: 64 GKFIESCNES--QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMS 121
KFIE N+ Q I++ + S +G ++K+I+ + +
Sbjct: 177 QKFIELGNDKLRQFVHSIIR-----GRVVELSKHMYGCRVIQKVIERSNTNEN--ERIFN 229
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIY--QAALEHCLYLACHEQGCINLNNF 179
+++ L+ + G+ VI + +E + +Y Q +E + H GC +
Sbjct: 230 EIEKSIIELIEDQNGNHVIQKIIENYWECIEKILYALQGQIEK---YSGHGFGCRVMQRI 286
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
I+ + QI + N LS ++ GNYV+QH+L + + +AI + + + S
Sbjct: 287 IEKRFDNFNNQIFQELQGNIIVLSMNQFGNYVIQHLLEFGNDIIREAIINEVEHVFFESS 346
Query: 240 LTKCGSFVVQKCLKY--QNAVHYIIEELLN--SDQILQVANDKYGNYVIQTALAETMRQD 295
L K S V++KC+++ N +I++L + D I ++ D + NYV+Q
Sbjct: 347 LLKFSSNVMEKCVQFGPSNKQQILIKKLFDCSDDMIYKMMKDPFANYVLQRMFTMMNNDQ 406
Query: 296 RLSVH----QRLVTKLQQHLAA 313
RL + QR +T L++++ A
Sbjct: 407 RLQFYTSYVQRNITSLRKNIYA 428
>gi|212526552|ref|XP_002143433.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
gi|210072831|gb|EEA26918.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
Length = 929
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 151/323 (46%), Gaps = 23/323 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L S +S D++F + +LM+ +G +V K E
Sbjct: 505 NH-IVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 563
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L + +K L + +
Sbjct: 564 NQSQKRILANQMKSH---ILALSTQMYGCRVVQKALEHI-----LTDQQAAMVKELDQHV 615
Query: 131 M---MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
M + G+ VI + +E H FI A + LA H GC + +++ + +
Sbjct: 616 MKCVRDQNGNHVIQKAIERVPTHHIRFIIDAFKGNVNKLATHPYGCRVIQRMLEHCETAD 675
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
R+ IL + V SL + GNYV+QHV+ + + ++ + + S K S V
Sbjct: 676 RESILTELHVCTESLIPDQFGNYVIQHVIENGEEKDRSVMIKSVVKNIHNFSKHKFASNV 735
Query: 248 VQKCLKY-QNAVHYIIEELLNS------DQILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+K +++ + + I LL + +L + D+YGNYVIQ L + +R
Sbjct: 736 VEKSIEFGEESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVLGQVKDSER---- 791
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++ +++ L+ L+ YG +
Sbjct: 792 EMIIDEIKPLLSQLKKFSYGKQI 814
>gi|344245037|gb|EGW01141.1| Pumilio-like 1 [Cricetulus griseus]
Length = 364
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 142/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 29 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 88
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 89 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 144
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 145 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 204
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 205 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 264
Query: 253 KYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + + + D+Y NYV+Q + D QR +
Sbjct: 265 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 318
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 319 MHKIRPHIATLRKYTYGKHI 338
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D ++++++ + G + + Q G
Sbjct: 89 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNG 148
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 149 NHVVQKCIECVQPQSLQFII--DAFKGQVFAL-STHPYGCRVIQRILEHC--LPDQTLPI 203
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 204 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 263
Query: 180 IDNMKGSRRKQIL-HLISVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + ++N ++ + + NYVVQ ++ + +P + +R
Sbjct: 264 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIR 323
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 324 PHIATLRKYTYGKHILAKLEKY 345
>gi|224059464|ref|XP_002299859.1| predicted protein [Populus trichocarpa]
gi|222847117|gb|EEE84664.1| predicted protein [Populus trichocarpa]
Length = 1065
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 151/326 (46%), Gaps = 46/326 (14%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + + ++ + LM+ +G +V KF E SQ
Sbjct: 741 DQYGSRFIQQKLETATMDEKNVVYEEIMPQALPLMTDVFGNYVIQKFFEHGLPSQ----- 795
Query: 80 LKITFQDQLF---LLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFL 130
+ LF L S+ +G ++K I+VV + L HVM ++
Sbjct: 796 -RRELAGNLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVEELDGHVMRCVR------ 848
Query: 131 MMTKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ VI +C+E P N + FI + + L+ H GC + +++ K ++
Sbjct: 849 --DQNGNHVIQKCIECIPEDNIQ--FIVSTFFDQVVNLSTHPYGCRVIQRILEHCKDAKT 904
Query: 189 K-----QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ +IL +S+ L++ + GNYVVQHVL AI L G V +S K
Sbjct: 905 ESKVMDEILGAVSM----LAQDQYGNYVVQHVLEHGKSHERSAIIKELAGKIVQMSQQKF 960
Query: 244 GSFVVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRL 297
S VV+KCL + ++ E+L + ++ LQ + D++ NYV+Q L Q R
Sbjct: 961 ASNVVEKCLTFSGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR- 1019
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ ++T+++ HL AL+ YG ++
Sbjct: 1020 ---ELILTRIKVHLNALKKYTYGKHI 1042
>gi|345567293|gb|EGX50227.1| hypothetical protein AOL_s00076g302 [Arthrobotrys oligospora ATCC
24927]
Length = 880
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 28/323 (8%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + S D +F + +LM+ +G +V KF E
Sbjct: 513 NH-VVEFSGDQHGSRFIQQKLETATSDEKDVIFSEIRPNALQLMTDVFGNYVIQKFFEHG 571
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+ Q A++ ++ + L S+ +G V+K ++ V L + +K + +
Sbjct: 572 NQLQKAMLAKQM---EGHVLKLSLQMYGCRVVQKALEHV-----LTEQQATLIKEIDGNV 623
Query: 131 MM---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ V+ + +E DFI +A LA H GC + +++
Sbjct: 624 LKCVKDQNGNHVVQKAIERVPAQHIDFILKAFKGQVQSLATHPYGCRVIQRMLEHCDEPA 683
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+ IL +++ +L + + GNYV QHV+ P I + H + S K S V
Sbjct: 684 QSSILQELNMCLYALIQDQYGNYVTQHVIEHGKPEDRAKIIHVVSQHVIQFSKHKFASNV 743
Query: 248 VQKCLKYQNAVHYIIEELLNSDQILQVAN----------DKYGNYVIQTALAETMRQDRL 297
V+K ++Y N +E+L + + A+ D+YGNYVIQ L +DR
Sbjct: 744 VEKSIQYGNEKQR--KEVLGTITAPKSADGPPPLQTLMKDQYGNYVIQKLLFLLDEEDRD 801
Query: 298 SVHQRLVTKLQQHLAALRVMKYG 320
+ L+ ++ LA L+ YG
Sbjct: 802 T----LIEAIKPQLANLKRFSYG 820
>gi|413921571|gb|AFW61503.1| hypothetical protein ZEAMMB73_884166 [Zea mays]
Length = 441
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 83 TFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQ 142
FQ Q F+LA V +L + + + L HVM ++ + G+ VI +
Sbjct: 196 NFQSQDFMLAL-------EVMELDQKIDLVHELDGHVMRCVR--------DQNGNHVIQK 240
Query: 143 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNAAS 201
C+E F+ A L+ H GC + +++ G+ + Q I+ I +A
Sbjct: 241 CIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGTSQSQCIVDEILQSACV 300
Query: 202 LSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNA---- 257
L++ + GNYV QHVL + I L G V +S K S V++KC ++ +
Sbjct: 301 LAQDQYGNYVTQHVLERGNAHERSQIIIKLAGQVVTMSQNKFASNVIEKCFQHGDMAERD 360
Query: 258 --VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALR 315
+ I+E+ +D +L + D+Y NYV+Q L ET +++ + LV++++ H+ ALR
Sbjct: 361 LLIRQIVEQTEGNDNLLAMMKDQYANYVVQKIL-ETCNENQREL---LVSRVKGHMQALR 416
Query: 316 VMKYGSNV 323
YG ++
Sbjct: 417 KYTYGKHI 424
>gi|169597459|ref|XP_001792153.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
gi|111070044|gb|EAT91164.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
Length = 917
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 151/345 (43%), Gaps = 39/345 (11%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+ A DQ GS+++Q+ L + +S + +++F + + +LM +G +V KF E ++
Sbjct: 526 DVVEFAGDQHGSRFIQQKLETANSEVKERIFKELESNSLQLMQDVFGNYVIQKFFEHGDQ 585
Query: 73 SQLALIILKI-----TFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
+Q ++ K+ +Q++ + + + K + H+ L+ S +K L
Sbjct: 586 TQKKILASKMKGHVSALANQMY-----------ACRVVQKALEHV--LVDQQASMVKELE 632
Query: 128 KFLMMT---KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
K ++ T + G+ VI + ++ I ++ H LA + GC + ++ +
Sbjct: 633 KDVLKTVKDQNGNHVIQKVIDRVPMEHIQVIVESFRGHIGVLAVNSYGCRVIQRLLEKVP 692
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+R+ I+ + A L GNYV QHV+ P I + ++ S K
Sbjct: 693 EPQRRFIMTELHARGADLITDSYGNYVTQHVIEHGLPEDRAKIVSLITAQFLTFSKHKFA 752
Query: 245 SFVVQKCL-------KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRL 297
S VV++CL + + +I + + +L + D YGNYVIQ L ET+ +D
Sbjct: 753 SNVVERCLVCSDDEQRRELVNAFIAKNERGENNLLNLLKDGYGNYVIQ-KLLETLNRDDY 811
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV-------YKWTTASHPCLA 335
+V V L+ L + + G + Y++ P +
Sbjct: 812 NV---FVAALKPELEKAKKLISGKQIVSVEKKMYRYDRVDSPTMP 853
>gi|134107804|ref|XP_777513.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260205|gb|EAL22866.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 673
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 43/296 (14%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q+ L + KLF + ++LM+ +G +V K E ++
Sbjct: 298 IVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKMFEHGDQL 357
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLI---------KVVAHLPPLLYHVMSALK 124
Q A + K+ D L S+ +G V+K + K+VA L P H++ +K
Sbjct: 358 QKAALAKKM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEP---HILECVK 411
Query: 125 R-----LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ + ++ T P S+ + FI H LA H GC L
Sbjct: 412 SSNANHVVQRIINTGPPQSI-----------PDSFI-----GHVEELAKHPYGCRVLQKT 455
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
+N+ ++ +L + SL+ + GNYV+Q V+++ P + + LRG +
Sbjct: 456 FENLDDKMKRSLLDEMHKCVISLTEDQFGNYVIQSVITVGKPEDRNKVISQLRGRVTTFA 515
Query: 240 LTKCGSFVVQKCLKYQNAV--HYIIEELL-----NSDQILQVANDKYGNYVIQTAL 288
K S VV+K L + + +I+EL+ ++Q+ + D Y N+ +QT +
Sbjct: 516 RHKFASNVVEKALIHADPADRRVLIDELIGMQLDGTNQVGMLLRDAYANFPLQTGM 571
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 163 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF 222
L L+ GC + +D++ +R +I+ + + + + N+VVQ +++ P
Sbjct: 370 VLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANHVVQRIINTGPP- 428
Query: 223 LIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ--ILQVANDKYG 280
+I + GH +L+ G V+QK ++N + LL+ ++ + D++G
Sbjct: 429 --QSIPDSFIGHVEELAKHPYGCRVLQKT--FENLDDKMKRSLLDEMHKCVISLTEDQFG 484
Query: 281 NYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
NYVIQ+ + +DR +++++L+ + K+ SNV
Sbjct: 485 NYVIQSVITVGKPEDR----NKVISQLRGRVTTFARHKFASNV 523
>gi|168030344|ref|XP_001767683.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681003|gb|EDQ67434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1085
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 15/276 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+ DQ GS+++Q+ L + + +F V LM+ +G +V KF E Q
Sbjct: 809 FSADQHGSRFIQQKLETATLEDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHGTHQQRR 868
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKV--VAHLPPLLYHVMSALKRLFKFLMMTK 134
+ K+ Q L+ S+ +G ++K ++V V L+ + + R + +
Sbjct: 869 ELASKLEGQ---VLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGNVMRCVR----DQ 921
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILH 193
G+ VI +C+E K FI A + L+ H GC + +++ ++K I+
Sbjct: 922 NGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIME 981
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
I + +L++ + GNYVVQHVL I L G V +S K S VV+KCL+
Sbjct: 982 EILRSTCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQMSQHKFASNVVEKCLE 1041
Query: 254 YQNAV--HYIIEELL---NSDQILQVANDKYGNYVI 284
Y V +I+E+L + ++ LQV + N ++
Sbjct: 1042 YGGPVERQILIDEMLGLTDENEPLQVLCELSSNSLV 1077
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALE-HCLYLACHEQGCINLNNFIDNMKGSR 187
++MT + ++Q H+ + LE L L+ GC + ++ + +
Sbjct: 843 LVLMTDVFGNYVIQKFFEHGTHQQRRELASKLEGQVLVLSLQMYGCRVIQKALEVVDVDQ 902
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+ Q++ + N R ++GN+V+Q + P I I A V LS G V
Sbjct: 903 QTQLVSELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRV 962
Query: 248 VQKCLKY---QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
+Q+ L++ + I+EE+L S L A D+YGNYV+Q L +R ++
Sbjct: 963 IQRVLEHCTDEQKQKGIMEEILRSTCTL--AQDQYGNYVVQHVLEHGRDHER----SEII 1016
Query: 305 TKLQQHLAALRVMKYGSNV 323
TKL + + K+ SNV
Sbjct: 1017 TKLAGQIVQMSQHKFASNV 1035
>gi|347970899|ref|XP_318367.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|347970901|ref|XP_003436659.1| AGAP003914-PC [Anopheles gambiae str. PEST]
gi|333469538|gb|EAA13588.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|333469540|gb|EGK97333.1| AGAP003914-PC [Anopheles gambiae str. PEST]
Length = 869
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 26/324 (8%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L S +F + G + LM+ +G +V KF E
Sbjct: 426 TNH-IVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEF 484
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSAL 123
+ Q + ++ + + LA + +G ++K ++ + + L HV+ +
Sbjct: 485 GSPEQKQALAQQV--KGHVLPLA-LQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCV 541
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K + G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 542 K--------DQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHC 593
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ IL + N L + + GNYV+QHVL P A+ ++RG + LS K
Sbjct: 594 TPEQTAPILAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKF 653
Query: 244 GSFVVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
S VV+KC+ + +IEE+ N + + D+Y NYV+Q + + R
Sbjct: 654 ASNVVEKCVTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQR--- 710
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ K++ H+ +L+ YG ++
Sbjct: 711 -KVLLHKIRPHMNSLKKYTYGKHI 733
>gi|167384832|ref|XP_001737111.1| pumilio [Entamoeba dispar SAW760]
gi|165900241|gb|EDR26620.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 526
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D S++++ GS+ +Q+++ G+ K++ + EL S + +V K +E E
Sbjct: 211 DYVSMSKEHNGSRTVQQSIEKGNETERQKIWRALQDHIVELSSDLFANYVIQKALEFIPE 270
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
S+ ++ K+ L ++ +G V+K ++ + L + L++ +
Sbjct: 271 SR-HIVPQKMKGN---VLRLTLHMYGCRVVQKAVEYASVKDRRL--LFEELRKSLVRCIE 324
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ VI +C+E I A L H GC + I+++ ++L
Sbjct: 325 DQNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELL 384
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+I ++ L+ + GNYVVQ+VL P I ++G+ V LS+ K S V++KC
Sbjct: 385 QVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCF 444
Query: 253 KY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTAL 288
K+ N I+EE+ ++ ILQ+ D++ NYV+Q +
Sbjct: 445 KFATPNERQQILEEIYQNNGILQMMQDQFANYVVQKII 482
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 195 ISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY 254
++++ S+S+ +G+ VQ + + I AL+ H V+LS ++V+QK L++
Sbjct: 208 VALDYVSMSKEHNGSRTVQQSIEKGNETERQKIWRALQDHIVELSSDLFANYVIQKALEF 267
Query: 255 QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDR 296
+I+ + + + +L++ YG V+Q A+ +DR
Sbjct: 268 IPESRHIVPQKMKGN-VLRLTLHMYGCRVVQKAVEYASVKDR 308
>gi|449500099|ref|XP_004161004.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 28/317 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L +F V +L++ +G +V KF E Q +
Sbjct: 697 DQHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKFFEHGTHEQRKELA 756
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHL-PPLLYHVMSALKRLFKFLMMT 133
++ Q L S+ +G ++K ++V+ HL L HVM ++
Sbjct: 757 DQLAGQ---ILPLSLQMYGCRVIQKALEVIELDQKTHLVRELDGHVMRCVR--------D 805
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E + + DFI + L+ H GC + +++ + Q I+
Sbjct: 806 QNGNHVIQKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQSQCIV 865
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + L++ + GNYV+QHVL I L G +V +S K S VV+KCL
Sbjct: 866 DEILDSVYGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMSQHKYASNVVEKCL 925
Query: 253 KYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
++ + + I+ + +D +L + D++ NYV+Q + E D+ +RL+ +
Sbjct: 926 EHGDTIERELIIEEIMGQSEENDTLLAMMKDQFANYVVQ-KIIEICNDDQ---RERLLNR 981
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 982 IKGHLQALKKYTYGKHI 998
>gi|195111827|ref|XP_002000478.1| GI22503 [Drosophila mojavensis]
gi|193917072|gb|EDW15939.1| GI22503 [Drosophila mojavensis]
Length = 871
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 154/322 (47%), Gaps = 22/322 (6%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
+NH + +QDQ GS+++Q+ L + +F + G + LM+ +G +V KF E
Sbjct: 424 SNH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEF 482
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 483 GTPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLK 537
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E F+ A L+ H GC + +++ +
Sbjct: 538 CVKDQNGNHVVQKCIECVDPAALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTPEQTT 597
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGS 245
IL + + +L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 598 PILDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFAS 653
Query: 246 FVVQKCLKYQNAVHY--IIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
VV+KC+ + +I+E+ N + + + D+Y NYV+Q + + +L +
Sbjct: 654 NVVEKCVTHATRSERTGLIDEVCTFNDNALHVMMKDQYANYVVQ-KMIDVSEPTQL---K 709
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
+L+TK++ H+ ALR YG ++
Sbjct: 710 KLMTKIRPHMTALRKYTYGKHI 731
>gi|449453445|ref|XP_004144468.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 28/317 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L +F V +L++ +G +V KF E Q +
Sbjct: 697 DQHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKFFEHGTHEQRKELA 756
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHL-PPLLYHVMSALKRLFKFLMMT 133
++ Q L S+ +G ++K ++V+ HL L HVM ++
Sbjct: 757 DQLAGQ---ILPLSLQMYGCRVIQKALEVIELDQKTHLVRELDGHVMRCVR--------D 805
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E + + DFI + L+ H GC + +++ + Q I+
Sbjct: 806 QNGNHVIQKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQSQCIV 865
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I + L++ + GNYV+QHVL I L G +V +S K S VV+KCL
Sbjct: 866 DEILDSVYGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMSQHKYASNVVEKCL 925
Query: 253 KYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
++ + + I+ + +D +L + D++ NYV+Q + E D+ +RL+ +
Sbjct: 926 EHGDTIERELIIEEIMGQSEENDTLLAMMKDQFANYVVQ-KIIEICNDDQ---RERLLNR 981
Query: 307 LQQHLAALRVMKYGSNV 323
++ HL AL+ YG ++
Sbjct: 982 IKGHLQALKKYTYGKHI 998
>gi|296814620|ref|XP_002847647.1| APUM2 [Arthroderma otae CBS 113480]
gi|238840672|gb|EEQ30334.1| APUM2 [Arthroderma otae CBS 113480]
Length = 916
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 32/319 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q L + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 525 DQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLA 584
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM---MTKPG 136
++ Q ++ L SV +G +V+K ++ V L+ + +K L +M + G
Sbjct: 585 QQM--QGHIYSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNG 636
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E N FI A H GC + +++ + R IL I
Sbjct: 637 NHVIQKAIERVPNEHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIH 696
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 697 ACTPSLISDQYGNYVIQHIIEFGEEADKNKIISIVLGQAVHFSKHKFASNVVEKSITFG- 755
Query: 257 AVHYIIEELLNSDQILQVAN------------DKYGNYVIQTALAETMRQDRLSVHQRLV 304
+E+ L +IL N D+YGNYVIQ +L+ D ++ LV
Sbjct: 756 ----TLEQRLGITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGSD----YKMLV 807
Query: 305 TKLQQHLAALRVMKYGSNV 323
+++ + L+ YG +
Sbjct: 808 SRIMPLMPLLKKCSYGKQI 826
>gi|194903420|ref|XP_001980865.1| GG17394 [Drosophila erecta]
gi|190652568|gb|EDV49823.1| GG17394 [Drosophila erecta]
Length = 937
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 518 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 576
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 577 TPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 631
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 632 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 691
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 692 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 747
Query: 247 VVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 748 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 803
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 804 LMTKIRPHMAALRKYTYGKHI 824
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
+ H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 517 VNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 576
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
P + + ++GH + L+L G V+QK L+ I+ EL +L+ D
Sbjct: 577 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 634
Query: 278 KYGNYVIQ 285
+ GN+V+Q
Sbjct: 635 QNGNHVVQ 642
>gi|28573153|ref|NP_788604.1| pumilio, isoform E [Drosophila melanogaster]
gi|25013093|gb|AAN71644.1| SD07661p [Drosophila melanogaster]
gi|28381200|gb|AAO41523.1| pumilio, isoform E [Drosophila melanogaster]
Length = 935
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 516 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 574
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 575 TPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 629
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 630 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 689
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 690 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 745
Query: 247 VVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 746 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 801
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 802 LMTKIRPHMAALRKYTYGKHI 822
>gi|386765393|ref|NP_001247002.1| pumilio, isoform F [Drosophila melanogaster]
gi|383292588|gb|AFH06320.1| pumilio, isoform F [Drosophila melanogaster]
Length = 925
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 506 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 564
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 565 TPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 619
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 620 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 679
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 680 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 735
Query: 247 VVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 736 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 791
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 792 LMTKIRPHMAALRKYTYGKHI 812
>gi|195499330|ref|XP_002096903.1| GE24797 [Drosophila yakuba]
gi|194183004|gb|EDW96615.1| GE24797 [Drosophila yakuba]
Length = 935
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 516 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 574
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 575 TPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 629
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 630 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 689
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 690 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 745
Query: 247 VVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 746 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 801
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 802 LMTKIRPHMAALRKYTYGKHI 822
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
+ H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 515 VNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 574
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
P + + ++GH + L+L G V+QK L+ I+ EL +L+ D
Sbjct: 575 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 632
Query: 278 KYGNYVIQ 285
+ GN+V+Q
Sbjct: 633 QNGNHVVQ 640
>gi|384494635|gb|EIE85126.1| hypothetical protein RO3G_09836 [Rhizopus delemar RA 99-880]
Length = 680
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 145/317 (45%), Gaps = 22/317 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F + +LM+ +G +V KF E N+
Sbjct: 336 IVEFSGDQHGSRFIQQKLETASREEKEMVFEEILPNALQLMTDVFGNYVLQKFFEHGNQL 395
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q A++ ++ + S+ +G ++K ++ V L ++ L +++
Sbjct: 396 QKAVLARQMEGH---VMSLSLQMYGCRVIQKALEYV-----LTEQQACLIRELDGYVLKC 447
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + +E FI A +L+ H GC + ++ G ++
Sbjct: 448 VKDQNGNHVIQKAIERVPAQHIRFIIDAFKGQVYHLSTHPYGCRVIQRVLEYCTGEQKNP 507
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L + SL + + GNYV+QH+L +P I + G + S K S VV+K
Sbjct: 508 LLKELDDFIESLIKDQYGNYVIQHILERGEPRDKANIIKKISGRVLSFSKHKFASNVVEK 567
Query: 251 CL------KYQNAVHYIIEELLNSD-QILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
C+ + Q+ + +++ + + ++ + D+Y NYV+Q L E +D+ + +L
Sbjct: 568 CVDNGSKEQRQDFIDEVVKCPTDGECPLVLMMKDQYANYVVQRML-EVATEDQRN---KL 623
Query: 304 VTKLQQHLAALRVMKYG 320
+ + HLA L+ YG
Sbjct: 624 IETTRPHLALLKKYPYG 640
>gi|391327709|ref|XP_003738339.1| PREDICTED: pumilio homolog 1-like [Metaseiulus occidentalis]
Length = 374
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 16/279 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ AQDQ+GS+++Q L S +F + + + LM+ ++G +V K + +E
Sbjct: 38 VIEFAQDQQGSRFIQHKLESATPSEKQMIFNEIFTWVYSLMTHEFGNYVVQKLFDFGSEE 97
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLP-PLLYHVMSALKRLFKFLMM 132
Q + K+T + ++ +G ++K + LP + ++ L+
Sbjct: 98 QKLALAGKMTGH---IVNLTMHIYGCRVMQK---ALVSLPTEVRKKLIDELRNHVVQCAN 151
Query: 133 TKPGSSVILQC---LEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ G+ V+ +C +EP Y FI + L H C + ++ K +
Sbjct: 152 DENGNHVMQKCFETIEPGYLQ---FIVDECIGKVRQLCSHSYACRVIQRLLEYCKFEQSI 208
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
IL I N L++ + GNYV+Q++L P AI A+RG+ V LS K S V++
Sbjct: 209 PILQEIHANTLELAQDQYGNYVIQYILQHGLPKDKSAIIQAIRGNVVALSCHKYASNVME 268
Query: 250 KCLKYQNAVH--YIIEEL-LNSDQILQVANDKYGNYVIQ 285
KC+ + +++ ++EE+ D I ++ D + NYV+Q
Sbjct: 269 KCVTHGSSLERTVLMEEVCATKDGIFKMMKDPFANYVVQ 307
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + A +QG + + +++ S ++ I + I SL H GNYVVQ +
Sbjct: 37 HVIEFAQDQQGSRFIQHKLESATPSEKQMIFNEIFTWVYSLMTHEFGNYVVQKLFDFGSE 96
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKY 279
A+ + GH V+L++ G V+QK L +I+EL N ++Q AND+
Sbjct: 97 EQKLALAGKMTGHIVNLTMHIYGCRVMQKALVSLPTEVRKKLIDELRN--HVVQCANDEN 154
Query: 280 GNYVIQ 285
GN+V+Q
Sbjct: 155 GNHVMQ 160
>gi|442618164|ref|NP_001262404.1| pumilio, isoform H [Drosophila melanogaster]
gi|440217235|gb|AGB95786.1| pumilio, isoform H [Drosophila melanogaster]
Length = 921
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 502 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 560
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 561 TPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 615
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 616 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 675
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 676 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 731
Query: 247 VVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 732 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 787
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 788 LMTKIRPHMAALRKYTYGKHI 808
>gi|395828861|ref|XP_003787581.1| PREDICTED: pumilio homolog 2 [Otolemur garnettii]
Length = 1027
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 24/285 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 792 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 845
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 846 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 900
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 901 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 960
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQ 285
V+KC+ + + +I+E+ + + + D+Y NYV+Q
Sbjct: 961 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 1005
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 8/164 (4%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H L LA GC + ++++ ++ +++ + + + ++GN+VVQ + P
Sbjct: 803 HVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQP 862
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQILQVANDKY 279
+ I A +G LS G V+Q+ L++ A I+EEL + Q+ D+Y
Sbjct: 863 QSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE--QLVQDQY 920
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GNYVIQ L +D+ ++V++++ + AL K+ SNV
Sbjct: 921 GNYVIQHVLEHGRPEDK----SKIVSEIRGKVLALSQHKFASNV 960
>gi|219116400|ref|XP_002178995.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409762|gb|EEC49693.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 319
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 146/325 (44%), Gaps = 27/325 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ QDQ GS+++Q+ L GD+ + V L + +G +V K ++ +
Sbjct: 8 IVEFCQDQNGSRFIQQRLELGDTSEQQIVMSEVLPAIRRLRNDVFGNYVIQKLLDFGSAD 67
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH--LPPLL----YHVMSALKRLF 127
+ I + T + ++ L S+ +G V+K ++ + LP LL ++V+S +
Sbjct: 68 MKSEI--RNTLESEMLQL-SLQMYGCRVVQKALEALPEEELPRLLMEFHHNVLSCIH--- 121
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + VI +C+E + +FI L + L+CH GC L +++ + ++
Sbjct: 122 -----DQNENHVIQKCVE-FLTEQIEFIINDVLVNTKTLSCHPYGCRVLQRILEHCEKTK 175
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAIC-FALRGHYVDLSLTKCGSF 246
+ +L I L + GNYV+QHVL D+I + + LS K S
Sbjct: 176 KTAVLDEICKAHRKLLDDQYGNYVIQHVLQFGRQSDRDSILHIVVENGLLGLSRQKFASN 235
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
VV+K LKY N I+ E+L IL + D Y NYV+QT L D + L+
Sbjct: 236 VVEKLLKYGNGSQRRAIVREMLKV--ILLMVRDAYANYVVQTTLDVVPESDEKRL---LL 290
Query: 305 TKLQQHLAALRVMKYGSN-VYKWTT 328
+L H LR + + V K TT
Sbjct: 291 KELSAHSEELRNYTFAKHIVTKLTT 315
>gi|356538982|ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1049
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E S
Sbjct: 718 VVEFSADQYGSRFIQQKLETATTEEKNLVYQEIMPHALALMTDVFGNYVVQKFFEHGLAS 777
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ L S+ +G ++K I+VV L + ++ L +M
Sbjct: 778 QRRELANKLHGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 829
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E FI + + L+ H GC + +++ K +Q
Sbjct: 830 VRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQ 889
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I + L++ + GNYVVQHVL P +I L V +S K S VV+
Sbjct: 890 KVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNVVE 949
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ E+L S ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 950 KCLTFGGPSERQLLVSEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 1005
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ +++ HL AL+ YG ++
Sbjct: 1006 LYRIKVHLNALKKYTYGKHI 1025
>gi|67484574|ref|XP_657507.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56474760|gb|EAL52117.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702146|gb|EMD42840.1| pumilio family RNA-binding protein, putative [Entamoeba histolytica
KU27]
Length = 439
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 151/325 (46%), Gaps = 28/325 (8%)
Query: 4 IAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVF 63
I + N+ + L +DQ+GS+ +Q L++ + +LF + G +ELM+ +G +V
Sbjct: 116 IKIQQTNNYTVTDLCKDQQGSRRIQTFLTTAKDFEITELFDSIKGDLYELMNDLFGNYVV 175
Query: 64 GKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSAL 123
KFIE N+ +L + I + L + +G ++K+I+ Y +
Sbjct: 176 QKFIELGND-KLRQFVHSIIRGKVVELSKHI--YGCRVIQKIIE---------YSNTNEN 223
Query: 124 KRLFKF-------LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINL 176
+R+F L+ + G+ VI + +E +Y + I A + H GC +
Sbjct: 224 ERIFNEIEKSIIELIEDQNGNHVIQKIIE-NYWGCIEKILSALQGQIEKYSGHGFGCRVV 282
Query: 177 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYV 236
I+ + QI + N LS ++ GNYV+QH+L + + +AI + +
Sbjct: 283 QRIIEKRDNNFNYQIFQELQGNIIVLSLNQFGNYVIQHLLEFGNDTIREAIINEVENVFF 342
Query: 237 DLSLTKCGSFVVQKCLKY--QNAVHYIIEELL--NSDQILQVANDKYGNYVIQTALAETM 292
+ SL K S V++KC+++ N +I++L + D+I ++ D + NYV+Q
Sbjct: 343 ESSLLKFSSNVMEKCVQFGPSNKQQLLIKKLFDCDDDKIYKMMKDPFANYVLQRMFTMMN 402
Query: 293 RQDRLSVH----QRLVTKLQQHLAA 313
RL + QR + L++++ A
Sbjct: 403 NDQRLQFYTSYVQRNINSLRKNIYA 427
>gi|255566430|ref|XP_002524200.1| pumilio, putative [Ricinus communis]
gi|223536477|gb|EEF38124.1| pumilio, putative [Ricinus communis]
Length = 1011
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 155/332 (46%), Gaps = 36/332 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGK------FI 67
+ + DQ GS+++Q+ L + + + +F + LM+ +G +V K +
Sbjct: 668 VVEFSADQYGSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFGNYVIQKKNHLSIVL 727
Query: 68 ESCNESQLALIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVA------HLPPLLYH 118
S E A I ++ DQL L S+ +G ++K I+VV + L H
Sbjct: 728 SSVFEHGSAAQIRELA--DQLIGHVLTLSLQMYGCRVIQKAIEVVELDQQTKMVSELDGH 785
Query: 119 VMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNN 178
+M ++ + G+ VI +C+E FI + + L+ H GC +
Sbjct: 786 IMRCVR--------DQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQR 837
Query: 179 FIDNMKGSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVD 237
+++ ++ ++I+ I + L++ + GNYVVQHVL P +I L G V
Sbjct: 838 VLEHCHDAKTQRIMMDEILQSVLMLAQDQYGNYVVQHVLEHGKPHERSSIIKKLTGQIVQ 897
Query: 238 LSLTKCGSFVVQKCLKYQNAVHY--IIEELLNS---DQILQV-ANDKYGNYVIQTALAET 291
+S K S V++KCL + A ++ E+L + ++ LQV D++ NYV+Q L ET
Sbjct: 898 MSQQKFASNVIEKCLTFGTAAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL-ET 956
Query: 292 MRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+L + ++ +++ HL AL+ YG ++
Sbjct: 957 CDDQQLEL---ILDRIKVHLNALKKYTYGKHI 985
>gi|356542345|ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1053
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 148/320 (46%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + + ++ + LM+ +G +V KF E S
Sbjct: 722 VVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAS 781
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + K+ L S+ +G ++K I+VV L + ++ L +M
Sbjct: 782 QRRELANKLLGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRC 833
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI +C+E FI + + L+ H GC + +++ K +Q
Sbjct: 834 VRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQ 893
Query: 191 -ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ I + L++ + GNYVVQHVL P +I L V +S K S VV+
Sbjct: 894 KVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNVVE 953
Query: 250 KCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
KCL + ++ ++L + ++ LQ + D++ NYV+Q L Q R + +
Sbjct: 954 KCLTFGGPSERQLLVSQMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELI 1009
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++++ HL AL+ YG ++
Sbjct: 1010 LSRIKVHLNALKKYTYGKHI 1029
>gi|342184736|emb|CCC94218.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 830
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 120/252 (47%), Gaps = 10/252 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
AQDQEGS+++Q + S S +D LF + EL+ +G +V K +E N QLA
Sbjct: 421 FAQDQEGSRFIQRAVESATSDEVDALFREIFESPLELVVDIFGNYVLQKLLEIGNARQLA 480
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ Q+ + L ++ +G ++K I+V+ P L +++ LK + + G
Sbjct: 481 YAATRL--QNNVVSL-TLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 535
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ +C+E + FI + LA H GC + +D+ L+
Sbjct: 536 NHVVQKCVE-VIPQRCGFIVSVFSGRVMELATHAYGCRVIQCIMDHCPDQEEAIFSELLQ 594
Query: 197 VNAASLSRHRSGNYVVQHVLS-LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+L+ + GNYV+QHVL + D + I AL+G++ + S K S V++K
Sbjct: 595 C-VGTLATDQYGNYVIQHVLQRVRDDDKVGRIFDALKGNFYEFSKQKFASNVMEKVFAQA 653
Query: 256 NAVHYIIEELLN 267
NA + EL+N
Sbjct: 654 NAQQRM--ELIN 663
>gi|405977786|gb|EKC42220.1| Pumilio-like protein 2 [Crassostrea gigas]
Length = 1012
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 20/322 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
N+ + +QDQ GS+++Q+ L + + +F + + LM+ +G +V KF E
Sbjct: 675 NNHVVEFSQDQHGSRFIQQKLERASPQEKNVVFNEILAHAYSLMTDVFGNYVIQKFFEFG 734
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+ Q + ++ L ++ +G ++K ++ + L ++ L
Sbjct: 735 SNEQKQTLAQRLRGH---VLPLALQMYGCRVIQKALETIPSD--LQVEIVKELDGHVVKC 789
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L L+ H GC + +++ +
Sbjct: 790 VKDQNGNHVVQKCIECVDPIHLQFIIDAFKGQVLALSTHPYGCRVIQRILEHCTKEQITP 849
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + L + + GNYVVQHVL I +RG + LS K S VV+K
Sbjct: 850 ILEELHQTTERLVQDQYGNYVVQHVLEHGSHDDKSKIVAEIRGKVLVLSQHKFASNVVEK 909
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR- 302
C+ Y + +IEE+ Q A D++ NYV+Q + D QR
Sbjct: 910 CVSYSSRAEKAMLIEEVCALTDGPQSALYIMMKDQFANYVVQKMI------DVAEPKQRN 963
Query: 303 -LVTKLQQHLAALRVMKYGSNV 323
L+ K++ H+A LR YG ++
Sbjct: 964 ILMHKIRPHIATLRKYTYGKHI 985
>gi|71983283|ref|NP_495523.3| Protein PUF-8 [Caenorhabditis elegans]
gi|351065107|emb|CCD66262.1| Protein PUF-8 [Caenorhabditis elegans]
Length = 535
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 152/326 (46%), Gaps = 30/326 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRI-LDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
L A+DQ GS+++Q+ L+S R D +F V EL+ +G +V KF E E
Sbjct: 199 LLKFAKDQVGSRFIQQELASSKDRFEKDSIFDEVVSNADELVDDIFGNYVVQKFFEYGEE 258
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHL-PPLLYHVMSALKRLFKFLM 131
A ++ I D++ A F + + L K + + PL ++S ++ + M
Sbjct: 259 RHWARLVDAII--DRVPEYA----FQMYACRVLQKALEKINEPLQIKILSQIRHVIHRCM 312
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALE--HCLY-LACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ + +E FI LE + +Y ++ GC + +++ S+
Sbjct: 313 KDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPYGCRVVQRCLEHCSPSQT 372
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGS 245
K ++ I ++ ++ GNYVVQHV+ S ED + I + + + + K S
Sbjct: 373 KPVIGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMV---IVTRVSNNLFEFATHKYSS 429
Query: 246 FVVQKCLKYQNAVHY---IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRL 297
V++KCL+ Q AV++ I+ + + ++Q+ D+Y NYV+Q + + R
Sbjct: 430 NVIEKCLE-QGAVYHKSMIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFDQVTSEQR- 487
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ ++ H+ LR +G ++
Sbjct: 488 ---RELILTVRPHIPVLRQFPHGKHI 510
>gi|195330502|ref|XP_002031942.1| GM26283 [Drosophila sechellia]
gi|194120885|gb|EDW42928.1| GM26283 [Drosophila sechellia]
Length = 873
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 22/321 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 454 NH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 512
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +++ + + LA + +G ++K ++ ++ P ++ L
Sbjct: 513 TPEQKNTLGMQV--KGHVLQLA-LQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLKC 567
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 568 VKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTP 627
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLS---LED-PFLIDAICFALRGHYVDLSLTKCGSF 246
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 628 ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASN 683
Query: 247 VVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L ++
Sbjct: 684 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KK 739
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+TK++ H+AALR YG ++
Sbjct: 740 LMTKIRPHMAALRKYTYGKHI 760
>gi|158828286|gb|ABW81162.1| PMpt5-1 [Capsella rubella]
Length = 961
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 22/288 (7%)
Query: 46 VSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKL 105
++G E S QYG + +E+ + ++ +I Q L L+ V FG+ ++K
Sbjct: 637 IAGHVVEFSSDQYGSRFIQQKLETATTDEKNIVYEEIMPQ-ALALMTDV--FGNYVIQKA 693
Query: 106 IKVVAHLPPLLYHVMSALKRLFKFLMM---TKPGSSVILQCLEPSYNHKNDFIYQAALEH 162
I+VV L + +K L +M + G+ V+ +C+E +FI +
Sbjct: 694 IEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGN 748
Query: 163 CLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
+ L+ H GC + +++ + + +++ I + L++ + GNYV+QHVL P
Sbjct: 749 VVTLSTHPYGCRVIQRVLEHCHEPDTQSKVMEEIMTTVSMLAQDQYGNYVIQHVLEHGKP 808
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNS---DQILQ-VA 275
I L G V +S K S VV+KCL + ++ E+L + ++ LQ +
Sbjct: 809 DERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEQRELLVNEMLGTTDENEPLQAMM 868
Query: 276 NDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D++ NYV+Q L Q R + ++T+++ HL AL+ YG ++
Sbjct: 869 KDQFANYVVQKVLETCDDQQR----ELILTRIKVHLNALKKYTYGKHI 912
>gi|403340179|gb|EJY69363.1| Pumilio [Oxytricha trifallax]
Length = 1146
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 147/305 (48%), Gaps = 27/305 (8%)
Query: 18 AQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 77
A DQ GS+++Q+ S + +F + +F LM+ +G +V K E E +
Sbjct: 681 AMDQYGSRFIQQKYDITSSAEKELIFNEILPESFNLMNDVFGNYVVQKLFEYGTEEHRST 740
Query: 78 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVA-HLPPLLYHVMSALKRLFKFLMMTKPG 136
+ ++ + L L S+ +G V+K ++V++ H +L +S LK + + G
Sbjct: 741 LAEQL-LGNVLKLTKSM--YGCRVVQKALEVISLHQQKIL---VSELKDNIIDCINDQNG 794
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI +C+E +FI + +E L H GC + ++N + + I+ I
Sbjct: 795 NHVIQKCIEKMPCDDIEFIIKPVIEKTSELCVHTYGCRVIQRVLENSNEAYTRSIIEGIL 854
Query: 197 VNAASLSRHRSGNYVVQHVLS----LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ +L+ + GNYV+QH+L ED D + +++G ++LS K S VV+KCL
Sbjct: 855 NDLHNLTMDQFGNYVIQHILENGKVQED---KDRVVKSIKGKVIELSNHKFASNVVEKCL 911
Query: 253 KY--QNAVHYIIEELL----------NSDQIL-QVANDKYGNYVIQTALAETMRQDRLSV 299
+Y + +IEE L N + +L Q+ D+YGNYVIQ + + + R +
Sbjct: 912 QYASEKDKAELIEEFLDLNFDEEAAMNQNGVLYQMMKDRYGNYVIQKCIEVSQGKQREIL 971
Query: 300 HQRLV 304
+R+
Sbjct: 972 MKRIT 976
>gi|162312380|ref|NP_593141.2| RNA-binding protein Puf3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|229891786|sp|O94462.4|PUF3_SCHPO RecName: Full=mRNA-binding protein puf3; AltName: Full=Pumilio
homology domain family member 3
gi|159883910|emb|CAA22616.2| RNA-binding protein Puf3 (predicted) [Schizosaccharomyces pombe]
Length = 732
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 145/312 (46%), Gaps = 18/312 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFW-VVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
+ DQ GS+++Q+ L++ + +F + S +LM +G +V K+ E NE Q
Sbjct: 404 FSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQLMMDIFGNYVVQKYFEFGNEKQK 463
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
+++ +I + +F L S+ +G V+K I+ ++ P ++ L + +
Sbjct: 464 QILLSQI--KGHVFSL-SLQMYGCRVVQKAIEYIS--PEHQVQLIQELDGHVLDCVCDQN 518
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI + +E FI +A L+ H GC + I++ S RK I+ +
Sbjct: 519 GNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCRVIQRAIEHCH-SERKLIIEEL 577
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+ L++ + GNYVVQH+L I + H + LS K S VV++C+ Y
Sbjct: 578 LPHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMIDHLLFLSCHKFASNVVERCISYI 637
Query: 256 NAV-------HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
+ V I E+ N ++ + DKY NYVIQ L + ++R L++ +
Sbjct: 638 SDVDRRRILNKIISEKAENCSILMLMMKDKYANYVIQKLLDASPEEER----DLLISYIY 693
Query: 309 QHLAALRVMKYG 320
H++ L+ YG
Sbjct: 694 PHISVLKKFTYG 705
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LMM G+ V+ + E + + H L+ GC + I+ + +
Sbjct: 441 LMMDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPEHQV 500
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
Q++ + + ++GN+V+Q + D + I ALR LS G V+Q
Sbjct: 501 QLIQELDGHVLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCRVIQ 560
Query: 250 KCLKY-QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
+ +++ + IIEELL IL++ D+YGNYV+Q L D+ + ++
Sbjct: 561 RAIEHCHSERKLIIEELL--PHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMI---- 614
Query: 309 QHLAALRVMKYGSNV 323
HL L K+ SNV
Sbjct: 615 DHLLFLSCHKFASNV 629
>gi|355714563|gb|AES05045.1| pumilio-like protein 2 [Mustela putorius furo]
Length = 600
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 267 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 326
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 327 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 380
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 381 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 435
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 436 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 495
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + + + D+Y NYV+Q + D
Sbjct: 496 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 549
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 550 QRKIIMHKIRPHITTLRKYTYGKHI 574
>gi|255080292|ref|XP_002503726.1| predicted protein [Micromonas sp. RCC299]
gi|226518993|gb|ACO64984.1| predicted protein [Micromonas sp. RCC299]
Length = 806
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 155/323 (47%), Gaps = 28/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + +F V +L++ +G +V KF+E +
Sbjct: 442 VVEFSSDQHGSRFIQQKLETAEPEEAAAVFAEVLPSAHQLITDVFGNYVVQKFLEYGTDE 501
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKV------VAHLPPLLYHVMSALKRLF 127
Q L+ ++ +D + L S+ +G ++K ++V A + L HV+ ++
Sbjct: 502 QRRLLAGEL--KDHVLSL-SLQMYGCRVIQKALEVFDEAQQTAMVNELDGHVLRCVR--- 555
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI +C+E + FI + + L L+ H GC + +++ +
Sbjct: 556 -----DQNGNHVIQKCIERVPPARIQFIVSSFYGNVLSLSTHPYGCRVIQRVLEHCTPEQ 610
Query: 188 RKQ-ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ + I+ I A L++ + GNYVVQHVL I L G V L+ K S
Sbjct: 611 KTEGIMDEILREAVQLAQDQYGNYVVQHVLQHGGEDERRKILATLAGQIVILAQHKFASN 670
Query: 247 VVQKCLKYQNAVHY--IIEELLNS---DQILQ-VANDKYGNYVIQTALAETMRQDRLSVH 300
V++KCL Y A +I E+L + ++ LQ + D++ NYV+Q L +R
Sbjct: 671 VIEKCLTYCGAEERQIMITEMLGTTDENEPLQAMMKDQFANYVVQKLLEVCDEGER---- 726
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
++L++++Q HL L+ YG ++
Sbjct: 727 EQLLSRMQVHLPNLKKFTYGKHI 749
>gi|407035183|gb|EKE37585.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 439
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 28/325 (8%)
Query: 4 IAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVF 63
I + N+ + L +DQ+GS+ +Q L++ + +LF + G +ELM+ +G +V
Sbjct: 116 IKIQQTNNYTVTDLCKDQQGSRRIQTFLTTAKDFEITELFDSIKGDLYELMNDLFGNYVV 175
Query: 64 GKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSAL 123
KFIE N+ +L + I + L S +G ++K+I+ Y +
Sbjct: 176 QKFIELGND-KLRQFVHSIIRGKVVEL--SKHMYGCRVIQKIIE---------YSNTNEN 223
Query: 124 KRLFKF-------LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINL 176
+R+F L+ + G+ VI + +E +Y + I A + H GC +
Sbjct: 224 ERIFNEIEKSIIELIEDQNGNHVIQKIIE-NYWGCIEKILSALQGQIEKYSGHGFGCRVM 282
Query: 177 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYV 236
I+ + QI + N LS ++ GNYV+QH+L + + +AI + +
Sbjct: 283 QRIIEKRDNNFNNQIFQELQGNIIVLSMNQFGNYVIQHLLEFGNDTIREAIINEVEDVFF 342
Query: 237 DLSLTKCGSFVVQKCLKY--QNAVHYIIEELLN--SDQILQVANDKYGNYVIQTALAETM 292
SL K S V++KC+++ N +I++L + D I ++ D + NYV+Q
Sbjct: 343 ASSLLKFSSNVMEKCVQFGPSNKQQILIKKLFDCTDDMIYKMMKDPFANYVLQRMFTMMN 402
Query: 293 RQDRLSVH----QRLVTKLQQHLAA 313
RL + QR + L++++ A
Sbjct: 403 NDQRLQFYTSYVQRNINSLRKNIYA 427
>gi|348517672|ref|XP_003446357.1| PREDICTED: pumilio homolog 2 isoform 1 [Oreochromis niloticus]
Length = 1214
Score = 77.4 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 42/343 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 855 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 914
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ ++ ++ ++ L +
Sbjct: 915 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKD 971
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 972 QNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILE 1031
Query: 194 LI------------------------SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
+ +V+ +L + + GNYV+QHVL P I
Sbjct: 1032 ELHQHSEQLGQKYQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVA 1091
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNY 282
+RG + LS K S VV+KC+ + + +I+E+ + + D+Y NY
Sbjct: 1092 EVRGKVLVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANY 1151
Query: 283 VIQTA--LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
V+Q +AE Q ++ +H K++ H+A LR YG ++
Sbjct: 1152 VVQRMIDMAEPA-QRKIIMH-----KIRPHIATLRKYTYGKHI 1188
>gi|222624342|gb|EEE58474.1| hypothetical protein OsJ_09731 [Oryza sativa Japonica Group]
Length = 599
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 115 LLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
L Y M K F+ + G + Q E + D I++ ++H L +
Sbjct: 384 LRYENMVGAKGYIYFMAKDQNGCRFLQQKFEEGKDQA-DLIFEGIIDHIPELMANSFANY 442
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSR---HRSGNYVVQHVLSLEDPFLIDAICFAL 231
+ +D +R +I+ +++ + L R + GNYV+Q+VL L+ PF +
Sbjct: 443 LVQKLLDVCDEEQRLRIIAVLTEDPVKLLRVSLNSHGNYVIQYVLDLKIPFANAQLASLF 502
Query: 232 RGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALA 289
+G+YV LS K GS VV+KCLK + II EL+++ Q+ D Y NYVI TAL
Sbjct: 503 QGNYVYLSKQKVGSNVVEKCLKVFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALV 562
Query: 290 ETMRQDRLSVHQRLVTKLQQHLAALRV 316
+T R + LV + H A+R
Sbjct: 563 QT----RGHLRSALVNAILPHEEAIRT 585
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
++ +A+DQ G ++LQ+ G + D +F + ELM+ + ++ K ++ C+E
Sbjct: 396 IYFMAKDQNGCRFLQQKFEEGKDQA-DLIFEGIIDHIPELMANSFANYLVQKLLDVCDEE 454
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q II +T L S++ G+ ++ ++ + +P + S + + +L
Sbjct: 455 QRLRIIAVLTEDPVKLLRVSLNSHGNYVIQYVLDL--KIPFANAQLASLFQGNYVYLSKQ 512
Query: 134 KPGSSVILQCLE 145
K GS+V+ +CL+
Sbjct: 513 KVGSNVVEKCLK 524
>gi|285026404|ref|NP_001165518.1| pumilio 2 [Oryzias latipes]
gi|261872059|gb|ACY02863.1| pumilio 2 [Oryzias latipes]
Length = 1199
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 42/343 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 840 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSPD 899
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ ++ ++ ++ L +
Sbjct: 900 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVIGDIVRELDGHVLKCVKD 956
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 957 QNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILE 1016
Query: 194 LI------------------------SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
+ +V+ +L + + GNYV+QHVL P I
Sbjct: 1017 ELHQHSEQLGQKYQAVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVA 1076
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNY 282
+RG + LS K S VV+KC+ + + +I+E+ + + D+Y NY
Sbjct: 1077 EVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANY 1136
Query: 283 VIQTA--LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
V+Q +AE Q ++ +H K++ H+A LR YG ++
Sbjct: 1137 VVQRMIDMAEPA-QRKIIMH-----KIRPHIATLRKYTYGKHI 1173
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ + R+ + I A L GNYV+Q P
Sbjct: 839 HMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSP 898
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY----QNAVHYIIEELLNSDQILQVAND 277
A+ +RGH + L+L G V+QK L+ Q + I+ EL +L+ D
Sbjct: 899 DQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVIGDIVREL--DGHVLKCVKD 956
Query: 278 KYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ GN+V+Q + E ++ L Q ++ Q + L YG V
Sbjct: 957 QNGNHVVQKCI-ECVQPQAL---QFIIDAFQGQVFVLSTHPYGCRV 998
>gi|213402367|ref|XP_002171956.1| PUF3 [Schizosaccharomyces japonicus yFS275]
gi|212000003|gb|EEB05663.1| PUF3 [Schizosaccharomyces japonicus yFS275]
Length = 840
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 46/333 (13%)
Query: 14 LFSLAQDQEGSQYLQENLS--SGDSRILDKLFW-VVSGFTFELMSGQYGRFVFGKFIESC 70
L + + DQ GS++LQ+ + S + R L LF +V+G +LM +G +V K +E
Sbjct: 506 LAAFSTDQHGSRFLQQKIETCSDEDRAL--LFHDIVNGNCLQLMMDVFGNYVVQKLLEFG 563
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+ Q + K+ L S+ +G +K ++ H+P L + ++ L +
Sbjct: 564 TDEQREVFTEKMKGH---VLTLSLQMYGCRVAQKALE---HIP--LNRQVELIQELDGDV 615
Query: 131 MM---TKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI + +E P Y H F+ A + + L+ H GC + I++
Sbjct: 616 LKCVKDQNGNHVIQKAIECIP-YGHL-QFVVDAVMPNVYNLSSHPYGCRVIQRIIEHFAD 673
Query: 186 SRRK-------QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDL 238
+R QILHL ++ + GNYV+QH++ P I + G+ + L
Sbjct: 674 ARSSVYLQLHTQILHL--------AQDQYGNYVIQHLMKKGSPSEQREIVEVVLGNVLHL 725
Query: 239 SLTKCGSFVVQKCLKY------QNAVHYIIEELLNSDQ-ILQVANDKYGNYVIQTALAET 291
S K S VV++C+ Y + + ++ E + D +L + DKY NYVIQ + +
Sbjct: 726 SRHKFASNVVERCISYCSDTDRERFFNSLLGENEDGDTYLLNLIKDKYANYVIQKLIDVS 785
Query: 292 MRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVY 324
+ R R++T L HL L+ YG ++Y
Sbjct: 786 KPELR----DRIITVLNPHLNVLKNYTYGKHLY 814
>gi|410916791|ref|XP_003971870.1| PREDICTED: pumilio homolog 2-like [Takifugu rubripes]
Length = 1201
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 42/343 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 842 MVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSAD 901
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ ++ ++ ++ L +
Sbjct: 902 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKD 958
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 959 QNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILE 1018
Query: 194 LI------------------------SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF 229
+ +V+ +L + + GNYV+QHVL P I
Sbjct: 1019 ELHQHSEQLGQKFQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVA 1078
Query: 230 ALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNY 282
+RG + LS K S VV+KC+ + + +I+E+ + + D+Y NY
Sbjct: 1079 EVRGKVLVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANY 1138
Query: 283 VIQTA--LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
V+Q +AE Q ++ +H K++ H+A LR YG ++
Sbjct: 1139 VVQRMIDMAEPA-QRKIIMH-----KIRPHIATLRKYTYGKHI 1175
>gi|145525300|ref|XP_001448472.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416016|emb|CAK81075.1| unnamed protein product [Paramecium tetraurelia]
Length = 483
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 29/327 (8%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+ ++ +Q S+ +Q+ +G + ++FW V E +G ++ K +E
Sbjct: 160 DIENMCGNQVLSRKVQKIFETGQTNQRQQIFWKVQANCQEFSKDIFGNYLIQKILEKGTL 219
Query: 73 SQLALIILKITFQDQLFLLA-SVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q ++I Q Q +++ S + FG ++KLI +++ L+ + +K+ K L+
Sbjct: 220 QQQ----IQIFKQLQPYVVELSKNTFGCRVIQKLIDIISKNDHLIVPFIQEIKQNIKSLL 275
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
+ G VIL+CLE FI + E ++ + GC + IDN KQ+
Sbjct: 276 TDQNGKYVILKCLENLSIDVVRFILKPTEELGFHMCDSQYGCKIIQKLIDNYP----KQV 331
Query: 192 LHLISV---NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
L+ + N L + + GN+++Q+ + L P +D I + H +L K S V
Sbjct: 332 DTLVQICITNQNLLYKSQHGNHILQYAIKL--PKYLDIIANYILNHLENLCFNKYASNTV 389
Query: 249 QKCLKY------QNAVHYIIEELLNSDQ--ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
+ LKY N V +++ N+ L +A + +GNYV++ L + Q+
Sbjct: 390 EDILKYLTPKLKNNFVQILMKPSENNGMFIFLNLAINPFGNYVVKKVL-QIFDQEH---K 445
Query: 301 QRLVTKLQQHLAALRVMK---YGSNVY 324
Q+LV ++Q+L L ++K YG +Y
Sbjct: 446 QQLVDLMKQNLRLLYLIKQSEYGQRIY 472
>gi|348675972|gb|EGZ15790.1| RNA-binding mating protein [Phytophthora sojae]
Length = 890
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 154/339 (45%), Gaps = 42/339 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
LF A+DQ GS+++Q+ L D + + F + + LM+ +G +V KF+E +
Sbjct: 551 LFIFAKDQTGSRFIQQKLEKADEHVKAEAFSEIYPNSLLLMTDVFGNYVIQKFLEYGSAD 610
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM- 131
Q AL+ L + L L +G +++ ++V + ++ +++L +M
Sbjct: 611 QQHALVELMTSNMISLALQV----YGCRVIQRALEVT-----RVEEQLALIRQLKGHVMK 661
Query: 132 --MTKPGSSVILQCLEPS-------YN----------HKNDFIYQAALEHCLYLACHEQG 172
+ + G+ V+ +C+E + YN FI + + H L+ H G
Sbjct: 662 CVVDQNGNHVLQKCIEAASWKRAAEYNGLGPQRFVTGEDIQFIIDSFIGHAAALSTHSYG 721
Query: 173 CINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
C + +++ ++ + +L+ I L + + GNYVVQHV+S +P D + A+
Sbjct: 722 CRVIQRVLEHCAPAQIRPLLNEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRDIVMQAVL 781
Query: 233 GHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQ------ILQVANDKYGNYVI 284
S K S VV+ CL++ + + I++ +L D+ +L + YGNYV+
Sbjct: 782 PEIARWSQHKYASNVVESCLEHATKGEISQIVDFILQCDESGASCPLLPMMKHMYGNYVV 841
Query: 285 QTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
Q L DR R+V ++ + L+ +G +V
Sbjct: 842 QKLLERADDHDR----HRIVCIIRHNEDYLKRFTFGKHV 876
>gi|74148485|dbj|BAE36346.1| unnamed protein product [Mus musculus]
Length = 534
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 201 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 260
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 261 QKLALATRIRGH---VLPLALQMYGYRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 314
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 315 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 369
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 370 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 429
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + + + D+Y NYV+Q + D
Sbjct: 430 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 483
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 484 QRKIIMHKIRPHITTLRKYTYGKHI 508
>gi|413942338|gb|AFW74987.1| hypothetical protein ZEAMMB73_090092 [Zea mays]
Length = 919
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 153/371 (41%), Gaps = 76/371 (20%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + + D +F + LM+ +G +V KF E + +
Sbjct: 540 VVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTA 599
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLF 127
Q+ + ++ + L S+ +G ++K I+VV + L HVM ++
Sbjct: 600 QIKELAGQLIGR---VLALSLQMYGCRVIQKAIEVVDLDLQTKMVAELEGHVMRCVR--- 653
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI +C+E H +FI + L+ H GC + +++ +
Sbjct: 654 -----DQNGNHVIQKCIECIPQHAIEFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPK 708
Query: 188 RKQIL-HLISVNAASLSRHRSGNYVVQ--------------------------------- 213
+QI+ I + L++ + GNYVVQ
Sbjct: 709 TQQIMMDEILQSVCLLAQDQYGNYVVQYCCLFHVAMCCAAVWNRKQQERCEYCCLSHVAM 768
Query: 214 ---------------HVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAV 258
HVL P AI L G V +S K S V++KCL + N V
Sbjct: 769 CCAAVWNRKQQERCEHVLEHGKPHERSAIIEKLIGQVVQMSQQKFASNVIEKCLAFGNPV 828
Query: 259 --HYIIEELLNS---DQILQV-ANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+I E+L S + L+V D++ NYV+Q L Q R + ++T+++ HL
Sbjct: 829 ERQVLIGEMLGSTSESEPLEVMMKDQFANYVVQKVLETCDDQQR----EMILTRIKTHLN 884
Query: 313 ALRVMKYGSNV 323
L+ YG ++
Sbjct: 885 TLKKYTYGKHI 895
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
GS I Q LE + + D ++ + L L G + F ++ ++ K++ +
Sbjct: 549 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQL 608
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK-- 253
+LS G V+Q + + D L + L GH + + G+ V+QKC++
Sbjct: 609 IGRVLALSLQMYGCRVIQKAIEVVDLDLQTKMVAELEGHVMRCVRDQNGNHVIQKCIECI 668
Query: 254 YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAA 313
Q+A+ +I+ Q++ ++ YG VIQ L D Q ++ ++ Q +
Sbjct: 669 PQHAIEFIVSTFYG--QVVMLSTHPYGCRVIQRVLEHC---DDPKTQQIMMDEILQSVCL 723
Query: 314 LRVMKYGSNVYKW 326
L +YG+ V ++
Sbjct: 724 LAQDQYGNYVVQY 736
>gi|407037210|gb|EKE38557.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 438
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 20/291 (6%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ L L +DQ+GS+ +Q+ +D++F ++ + ELM +G +V K +E
Sbjct: 120 YSLPELCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEHGT 179
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ + L+ K+ Q + L S+ +G ++K+I+V++ P + + S +K +
Sbjct: 180 KKHVHLLFEKL--QGNVVKL-SLHMYGCRVIQKIIEVLS--PEEVRIISSEIKSNVSTFI 234
Query: 132 MTKPGSSVILQCL----EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI + + E N D IY A+E+ + H GC + I+ +
Sbjct: 235 EDQNGNHVIQKFIDFASEIDLNFMIDEIYTKAVEY----SKHPYGCRVIQRLIEKNSQNC 290
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
K++ + LS ++ GNYV+QH++ I ++G + S+ K S V
Sbjct: 291 VKRVTDKLVEYVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNV 350
Query: 248 VQKCLKYQNAVHYII--EELLNSD----QILQVANDKYGNYVIQTALAETM 292
V+KC++ II EL NS+ QI ++ D Y NYVIQ L E M
Sbjct: 351 VEKCIRCCETREQIILVNELCNSNVTNKQINEMICDPYANYVIQ-RLIEMM 400
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM+ G+ VI + +E +++ + + L+ H GC + I+ + +
Sbjct: 161 LMIDLFGNYVIQKLVEHGTKKHVHLLFEKLQGNVVKLSLHMYGCRVIQKIIEVLSPEEVR 220
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I I N ++ ++GN+V+Q + ++ + + V+ S G V+Q
Sbjct: 221 IISSEIKSNVSTFIEDQNGNHVIQKFIDFASEIDLNFMIDEIYTKAVEYSKHPYGCRVIQ 280
Query: 250 KCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+ ++ QN V + ++L+ + + +++ ++YGNYVIQ + + R+ + V +
Sbjct: 281 RLIEKNSQNCVKRVTDKLV--EYVWELSINQYGNYVIQHLIQYGTNEQRVEI----VNNI 334
Query: 308 QQHLAALRVMKYGSNV 323
+ L + KY SNV
Sbjct: 335 KGKLYEYSMKKYSSNV 350
>gi|71748656|ref|XP_823383.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833051|gb|EAN78555.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 843
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 9/244 (3%)
Query: 8 HCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFI 67
H NH + AQDQEGS+++Q + S +D LF + EL+ +G +V K +
Sbjct: 426 HILNHAV-EFAQDQEGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYVLQKLL 484
Query: 68 ESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
E N QLA ++ Q+ + L ++ +G ++K I+V+ P L ++S L+
Sbjct: 485 EVGNARQLAYAATRL--QNNVVNL-TLQTYGCRVIQKCIEVMP--PEGLDIILSELRGNV 539
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ V+ +C+E + FI A + LA H GC + +D+
Sbjct: 540 AKCIQDQNGNHVVQKCVE-VIPQRCGFIVSAFSGRVMELATHAYGCRVIQCIMDHCPDQE 598
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLS-LEDPFLIDAICFALRGHYVDLSLTKCGSF 246
L+ +L+ + GNYV+QHVL ++D + I AL+G++ + S K S
Sbjct: 599 EAIFSELLDC-VGTLATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESSKQKFASN 657
Query: 247 VVQK 250
V++K
Sbjct: 658 VMEK 661
>gi|296417426|ref|XP_002838359.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634287|emb|CAZ82550.1| unnamed protein product [Tuber melanosporum]
Length = 999
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 22/322 (6%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
H + + DQ GS+++Q+ L + +S + +F + + +LM+ +G +V KF E N
Sbjct: 619 HHVVEFSGDQHGSRFIQQKLETANSDEKETIFAEIKSNSLQLMTDVFGNYVIQKFFEHGN 678
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
QL IL + + L S+ +G V+K ++ + L S +K L ++
Sbjct: 679 --QLQKSILAKQMEGHVLAL-SLQMYGCRVVQKALEHI-----LTEQQASLVKELDGSVL 730
Query: 132 ---MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ + +E FI +A LA H GC + +++ + +
Sbjct: 731 KCVKDQNGNHVVQKAIERVPAEHIQFIIKAFRGQVHTLATHPYGCRVIQRMLEHCDETAQ 790
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
+L + V +L + + GNYV QHV+ P I + + S K S VV
Sbjct: 791 ASLLQELHVCTIALVQDQYGNYVTQHVIEHGKPEDRAKIISLVTTQLLQFSKHKFASNVV 850
Query: 249 QKCLKY------QNAVHYIIEELLNSDQILQV-ANDKYGNYVIQTALAETMRQDRLSVHQ 301
+K + + + V + + + LQ+ D+YGNYVIQ L DR +
Sbjct: 851 EKSITFGSEEEKREIVKVVTTPRSDGNSPLQILMRDQYGNYVIQKLLTLLQGPDR----E 906
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
LV +++ L AL+ YG +
Sbjct: 907 TLVEQIKPQLQALKKFTYGKQI 928
>gi|322702154|gb|EFY93902.1| hypothetical protein MAC_00393 [Metarhizium acridum CQMa 102]
Length = 829
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 25/299 (8%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L S +S D++F + +LM +G +V KF E
Sbjct: 436 NH-VVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHG 494
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFK 128
N+ Q ++ K+ + + S+ + V+K ++ +V L + + R+ +
Sbjct: 495 NQVQKKVLAEKMKGK---VVDLSMQVYACRVVQKALEHVLVEQQAELTKELEPDILRVIR 551
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ + +E DFI A LA H GC + +++ S +
Sbjct: 552 ----DQNGNHVVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDK 607
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
+I+ + +A L + GNYV QHV+ P +ID + L + LS K
Sbjct: 608 MEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRARMIDLVMAQL----LTLSKHKFA 663
Query: 245 SFVVQKCLKYQNAVHY--IIEEL--LNSD---QILQVANDKYGNYVIQTALAETMRQDR 296
S VV+KC+++ A I E+L + SD + Q+ D+YGNYVIQ L + ++R
Sbjct: 664 SNVVEKCIEHGTAEQRTSIREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLLGQLEGRER 722
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 21/214 (9%)
Query: 87 QLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEP 146
Q F A + +G V + A+LPP+ R + K SV+L
Sbjct: 371 QNFRNAMMSGYGIHPVPSAYSLAANLPPV---------RPSRDQDPGKGVRSVLLDEFRL 421
Query: 147 SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 206
S + + H + + + G + +++ + Q+ I NA L +
Sbjct: 422 SNKSNKRYELKDIYNHVVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDV 481
Query: 207 SGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEEL- 265
GNYVVQ + + ++G VDLS+ VVQK L+ H ++E+
Sbjct: 482 FGNYVVQKFFEHGNQVQKKVLAEKMKGKVVDLSMQVYACRVVQKALE-----HVLVEQQA 536
Query: 266 -----LNSDQILQVANDKYGNYVIQTALAETMRQ 294
L D IL+V D+ GN+V+Q + RQ
Sbjct: 537 ELTKELEPD-ILRVIRDQNGNHVVQKIIELVPRQ 569
>gi|261333325|emb|CBH16320.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 843
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 9/244 (3%)
Query: 8 HCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFI 67
H NH + AQDQEGS+++Q + S +D LF + EL+ +G +V K +
Sbjct: 426 HILNHAV-EFAQDQEGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYVLQKLL 484
Query: 68 ESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
E N QLA ++ Q+ + L ++ +G ++K I+V+ P L ++S L+
Sbjct: 485 EVGNARQLAYAATRL--QNNVVNL-TLQTYGCRVIQKCIEVMP--PEGLDIILSELRGNV 539
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ V+ +C+E + FI A + LA H GC + +D+
Sbjct: 540 AKCIQDQNGNHVVQKCVE-VIPQRCGFIVSAFSGRVMELATHAYGCRVIQCIMDHCPDQE 598
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLS-LEDPFLIDAICFALRGHYVDLSLTKCGSF 246
L+ +L+ + GNYV+QHVL ++D + I AL+G++ + S K S
Sbjct: 599 EAIFSELLDC-VGTLATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESSKQKFASN 657
Query: 247 VVQK 250
V++K
Sbjct: 658 VMEK 661
>gi|313229012|emb|CBY18164.1| unnamed protein product [Oikopleura dioica]
Length = 750
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 153/321 (47%), Gaps = 23/321 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + +++L+ +G +V KF+E
Sbjct: 425 NH-MVEFSQDQHGSRFIQQKLERCNPSDRQLVFNEIISHSYQLIIDVFGNYVIQKFLEFG 483
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q I+ I + L S+ +G ++ ++ + ++ +++ L+
Sbjct: 484 TAEQKQQIVDNIKGK---VLQLSLQMYGCRVIQTALESLNQEQQMI--IVNELQNSILRC 538
Query: 131 MMTKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ + G+ VI + +E P+ N +FI A + L+ H GC + +++ +
Sbjct: 539 VKDQNGNHVIQKIIECLPADNL--EFIISAFNGQVVGLSTHAYGCRVVQRVLEHCTEEQY 596
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLS---LEDPFLIDAICFALRGHYVDLSLTKCGS 245
I+ I N L + + GNYV+QH+L+ +ED + I A+ G V LS K S
Sbjct: 597 MPIMEEIHKNHEMLIQDQYGNYVIQHILNRGKMEDRQM---ILRAVMGRIVTLSQHKFAS 653
Query: 246 FVVQKCLKYQNAVHY--IIEELLNS-DQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
V++KC+ N +IEE+ S D + + D++ NYV+Q L R Q+
Sbjct: 654 NVIEKCVTTSNRTERALLIEEVCQSPDSLFIMMKDQFANYVVQKMLDMGDSAQR----QK 709
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
+V K++ H++ L+ YG ++
Sbjct: 710 MVQKMKPHVSNLKRFTYGKHI 730
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 208 GNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEEL 265
GNYV+Q L I ++G + LSL G V+Q L+ N I+ EL
Sbjct: 472 GNYVIQKFLEFGTAEQKQQIVDNIKGKVLQLSLQMYGCRVIQTALESLNQEQQMIIVNEL 531
Query: 266 LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYK 325
NS IL+ D+ GN+VIQ + E + D L +++ + L YG V +
Sbjct: 532 QNS--ILRCVKDQNGNHVIQ-KIIECLPADNLEF---IISAFNGQVVGLSTHAYGCRVVQ 585
>gi|58263134|ref|XP_568977.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263136|ref|XP_568978.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263138|ref|XP_568979.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223627|gb|AAW41670.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223628|gb|AAW41671.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223629|gb|AAW41672.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 673
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 43/296 (14%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q+ L + KLF + ++LM+ +G +V K E ++
Sbjct: 298 IVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKMFEHGDQL 357
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLI---------KVVAHLPPLLYHVMSALK 124
Q A + K+ D L S+ +G V+K + K+VA L P H++ +K
Sbjct: 358 QKAALAKKM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEP---HILECVK 411
Query: 125 R-----LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ + ++ T P S+ + FI H LA H GC L
Sbjct: 412 SSNANHVVQRIINTGPPQSI-----------PDSFI-----GHVEELAKHPYGCRVLQKT 455
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
+N+ ++ +L + L+ + GNYV+Q V+++ P + + L+G +
Sbjct: 456 FENLDDKMKRSLLDEMHKCVIPLTEDQFGNYVIQSVITVGKPEDRNKVISQLKGRVTTFA 515
Query: 240 LTKCGSFVVQKCLKYQNAV--HYIIEELL-----NSDQILQVANDKYGNYVIQTAL 288
K S VV+K L + + +I+EL+ ++Q+ + D Y N+ +QT +
Sbjct: 516 RHKFASNVVEKALIHADPADRRVLIDELIGMQPDGTNQVGMLLRDAYANFPLQTGM 571
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 163 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF 222
L L+ GC + +D++ +R +I+ + + + + N+VVQ +++ P
Sbjct: 370 VLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANHVVQRIINTGPP- 428
Query: 223 LIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ--ILQVANDKYG 280
+I + GH +L+ G V+QK ++N + LL+ ++ + D++G
Sbjct: 429 --QSIPDSFIGHVEELAKHPYGCRVLQKT--FENLDDKMKRSLLDEMHKCVIPLTEDQFG 484
Query: 281 NYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
NYVIQ+ + +DR +++++L+ + K+ SNV
Sbjct: 485 NYVIQSVITVGKPEDR----NKVISQLKGRVTTFARHKFASNV 523
>gi|385304539|gb|EIF48553.1| protein of the mitochondrial outer surface [Dekkera bruxellensis
AWRI1499]
Length = 419
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 145/311 (46%), Gaps = 24/311 (7%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
+ ++DQ GS+++Q+ L+ + + +F + ++ +LM+ +G +V K+ E NE+Q
Sbjct: 91 YEFSKDQHGSRFIQQQLADASAEDKEMIFNEIRNYSIDLMTDVFGNYVIQKYFEYGNETQ 150
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK 134
+ ++ + F S+ +G V+K + V+ L V+ LK L+ +
Sbjct: 151 IKILFESMKGN---FNFLSMQMYGCRVVQKCMDSVSLDDRL--QVVDELKPNILNLVKDQ 205
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ VI + +E + FI ++ L+H +Y L+ H GC + ++ R IL
Sbjct: 206 NGNHVIQKVIESIPTSRTPFILES-LKHQIYHLSTHPYGCRVIQRLLEYSDEEDRAYILG 264
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ L + + GNYV+QH++ + I + + V+LS K S V+KC+
Sbjct: 265 ELKGFIYYLVQDQFGNYVIQHIIEHGSEQYTEQILQIVIDNLVNLSKHKFASNAVEKCIV 324
Query: 254 YQNA------VHYIIEELLNSDQILQ-------VANDKYGNYVIQTALAETMRQDRLSVH 300
+Q+A + ++ + N D L + D + NYV+Q + +R
Sbjct: 325 HQSAENRRRVYNALLAKNENKDSPLDENSSLSIMMKDPFANYVVQKMVELVDGPERA--- 381
Query: 301 QRLVTKLQQHL 311
LV K++Q+L
Sbjct: 382 -LLVYKIRQYL 391
>gi|315053707|ref|XP_003176228.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311338074|gb|EFQ97276.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 914
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 32/319 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q L + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 521 DQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLA 580
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM---MTKPG 136
++ Q + L SV +G +V+K ++ V L+ + +K L +M + G
Sbjct: 581 QQM--QGNICSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNG 632
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E N FI A H GC + +++ + R IL I
Sbjct: 633 NHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIH 692
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 693 ACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFG- 751
Query: 257 AVHYIIEELLNSDQILQVAN------------DKYGNYVIQTALAETMRQDRLSVHQRLV 304
+E+ L +IL N D+YGNYVIQ +L+ +D ++ LV
Sbjct: 752 ----TMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGED----YKMLV 803
Query: 305 TKLQQHLAALRVMKYGSNV 323
+++ + L+ YG +
Sbjct: 804 SRIMPLMPLLKKCSYGKQI 822
>gi|449019193|dbj|BAM82595.1| similar to translational repressor pumilio [Cyanidioschyzon merolae
strain 10D]
Length = 1506
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 78/344 (22%), Positives = 145/344 (42%), Gaps = 52/344 (15%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFE---LMSGQYGRFVFGKFIESC 70
+ + DQ GS+++Q L + D++ WV+ E L++ +G +V K +E
Sbjct: 1031 IVEFSTDQHGSRFIQTKLETATP---DQVGWVLQEVLAEMNRLVTDVFGNYVVQKLLEHG 1087
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALK 124
L I +K+ + L S+ +G +V+K ++V+ + L HV+ ++
Sbjct: 1088 TARDLQAIAMKLKNR---ILALSLHMYGCRAVQKALEVLPASTQAELVIELDGHVLKCIR 1144
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI +C+E FI A + LA H GC + ++
Sbjct: 1145 --------DQNGNHVIQKCIERVPGQHVQFIVDAVRGQAVSLAEHSYGCRVIQRILEYSP 1196
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
++ I+ I +L R + GNYV+QHV+ I +R + +S K
Sbjct: 1197 EEQKVPIMREIMQACRTLIRDQYGNYVIQHVVEHGKEEERAHILRMVRDQCISMSQHKYA 1256
Query: 245 SFVVQKCLKYQNAV--HYIIEELL-----------------------NSDQILQVANDKY 279
S VV++CL++ + +I+ LL NS ++ + D++
Sbjct: 1257 SNVVERCLQHGSPADRKALIDILLGRSDVAGSGSGGGGSSGATALPRNSVPLIDLVQDQF 1316
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GNYV+Q L + R Q+ L+ +L ++ YG ++
Sbjct: 1317 GNYVVQRVLDVAGDEQR----QQAAELLRANLNVIKRFSYGKHI 1356
>gi|225560981|gb|EEH09262.1| pumilio domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 917
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 146/325 (44%), Gaps = 27/325 (8%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L S +S D++F + +LM+ +G +V K E
Sbjct: 496 NH-IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 554
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 555 NQSQKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 606
Query: 131 M---MTKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI + +E PS + + FI A LA H GC + +++
Sbjct: 607 LKCVKDQNGNHVIQKAVERVPSVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCTE 664
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
R+ IL + +SL + GNYV+QHV+ + I + + S K S
Sbjct: 665 PDRRAILEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFAS 724
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLS 298
VV+K +++ + I+ +L + +L + D+YGNYVIQ L + +R
Sbjct: 725 NVVEKSIEFGADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLER-- 782
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+ LV K++ L L+ YG +
Sbjct: 783 --EALVKKIEPQLTQLKKFSYGKQI 805
>gi|178847547|pdb|3BSB|A Chain A, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847548|pdb|3BSB|B Chain B, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847550|pdb|3BSX|A Chain A, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
gi|178847551|pdb|3BSX|B Chain B, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
Length = 343
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 26 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 85
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 86 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 139
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 140 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 194
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 195 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 254
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLS 298
V+KC+ + + +I+E+ + + + D+Y NYV+Q + AE Q ++
Sbjct: 255 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPG-QRKIV 313
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 314 MH-----KIRPHIATLRKYTYGKHI 333
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 12/260 (4%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRF 61
Q +A + SLA G + +Q+ L S +++ + G + + Q G
Sbjct: 86 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNH 145
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMS 121
V K IE L II F+ Q+F L S +G ++++++ LP ++
Sbjct: 146 VVQKCIECVQPQSLQFII--DAFKGQVFAL-STHPYGCRVIQRILEHC--LPDQTLPILE 200
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
L + + L+ + G+ VI LE I + L L+ H+ + +
Sbjct: 201 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 260
Query: 182 NMKGSRRKQIL-HLISVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
+ + R ++ + ++N ++ + + NYVVQ ++ + +P + +R H
Sbjct: 261 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPH 320
Query: 235 YVDLSLTKCGSFVVQKCLKY 254
L G ++ K KY
Sbjct: 321 IATLRKYTYGKHILAKLEKY 340
>gi|225683895|gb|EEH22179.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 932
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 23/323 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L S +S DK+F + + +LM+ +G +V K E
Sbjct: 508 NH-IVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKLFEHG 566
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 567 NQSQKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 618
Query: 131 M---MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E FI A LA H GC + +++
Sbjct: 619 LKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGD 678
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
R+ IL + +ASL + GNYV+QH+L + I + + S K S V
Sbjct: 679 RQAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNV 738
Query: 248 VQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+K +++ ++ I++ L + +L + D+YGNYVIQ L + +R
Sbjct: 739 VEKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSER---- 794
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ LV++++ L L+ YG +
Sbjct: 795 ENLVSQIEPQLIHLKKFSYGKQI 817
>gi|14277944|pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|23200484|pdb|1M8Z|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|24159005|pdb|1M8W|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159006|pdb|1M8W|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159011|pdb|1M8X|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159012|pdb|1M8X|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159015|pdb|1M8Y|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|24159016|pdb|1M8Y|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|326327989|pdb|3Q0L|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327990|pdb|3Q0L|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327993|pdb|3Q0M|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327994|pdb|3Q0M|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327997|pdb|3Q0N|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326327998|pdb|3Q0N|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328001|pdb|3Q0O|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328002|pdb|3Q0O|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328005|pdb|3Q0P|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
gi|326328006|pdb|3Q0P|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
Length = 349
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 139/325 (42%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 26 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 85
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 86 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 139
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 140 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 194
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 195 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 254
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + + + D+Y NYV+Q + D
Sbjct: 255 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 308
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 309 QRKIVMHKIRPHIATLRKYTYGKHI 333
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 12/260 (4%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRF 61
Q +A + SLA G + +Q+ L S +++ + G + + Q G
Sbjct: 86 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNH 145
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMS 121
V K IE L II F+ Q+F L S +G ++++++ LP ++
Sbjct: 146 VVQKCIECVQPQSLQFII--DAFKGQVFAL-STHPYGCRVIQRILEHC--LPDQTLPILE 200
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
L + + L+ + G+ VI LE I + L L+ H+ + +
Sbjct: 201 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 260
Query: 182 NMKGSRRKQIL-HLISVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
+ + R ++ + ++N ++ + + NYVVQ ++ + +P + +R H
Sbjct: 261 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPH 320
Query: 235 YVDLSLTKCGSFVVQKCLKY 254
L G ++ K KY
Sbjct: 321 IATLRKYTYGKHILAKLEKY 340
>gi|403357293|gb|EJY78273.1| Pumilio [Oxytricha trifallax]
Length = 1120
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 21/285 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ+ S+++Q+ L LF + + +LM +G +V K +E N++Q ++
Sbjct: 668 DQQCSRFIQQRLEDAKDEEKQLLFNELMNDSQKLMKDVFGNYVIQKMLEYGNQNQRTMLY 727
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSV 139
+I + S D++G V+K ++VV ++ ++ + + G+ V
Sbjct: 728 QQIKGN---MIPLSQDQYGCRVVQKALEVVTTQ--QQDDLIGEIRPQVQLCVEDPNGNHV 782
Query: 140 ILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 199
I + +E + K FI A ++ H+ GC + +++ K + K IL +
Sbjct: 783 IQKIIEQVSSEKVQFIVDAFKGRVYEMSVHQYGCRVIQRMLEHCKEDQIKPILVEVFERV 842
Query: 200 ASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNA 257
L++ GNYV+ HVL + ++ V LS+ K GS V++KCL++ Q
Sbjct: 843 LDLTKDLYGNYVISHVLEHGAQKYKTFVINKMKKRVVQLSIHKFGSNVIEKCLQHSDQKQ 902
Query: 258 VHYIIEELL------------NSDQ--ILQVANDKYGNYVIQTAL 288
IIEE++ NS ++ V DKYGN+VIQ L
Sbjct: 903 KDDIIEEIIQVRLMDDETYQSNSQNFTLMDVMKDKYGNFVIQRVL 947
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 115 LLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
L +M+ ++L K + G+ VI + LE ++ +YQ + + L+ + GC
Sbjct: 690 LFNELMNDSQKLMKDVF----GNYVIQKMLEYGNQNQRTMLYQQIKGNMIPLSQDQYGCR 745
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
+ ++ + ++ ++ I +GN+V+Q ++ + I A +G
Sbjct: 746 VVQKALEVVTTQQQDDLIGEIRPQVQLCVEDPNGNHVIQKIIEQVSSEKVQFIVDAFKGR 805
Query: 235 YVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETM 292
++S+ + G V+Q+ L++ ++ + I+ E+ +++L + D YGNYVI L
Sbjct: 806 VYEMSVHQYGCRVIQRMLEHCKEDQIKPILVEVF--ERVLDLTKDLYGNYVISHVLEHGA 863
Query: 293 RQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ + V + K+++ + L + K+GSNV
Sbjct: 864 QKYKTFV----INKMKKRVVQLSIHKFGSNV 890
>gi|226293282|gb|EEH48702.1| mRNA binding protein Pumilio 2 [Paracoccidioides brasiliensis Pb18]
Length = 958
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 23/323 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L S +S DK+F + + +LM+ +G +V K E
Sbjct: 534 NH-IVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKLFEHG 592
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 593 NQSQKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 644
Query: 131 M---MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E FI A LA H GC + +++
Sbjct: 645 LKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGD 704
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
R+ IL + +ASL + GNYV+QH+L + I + + S K S V
Sbjct: 705 RQAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNV 764
Query: 248 VQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+K +++ ++ I++ L + +L + D+YGNYVIQ L + +R
Sbjct: 765 VEKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSER---- 820
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ LV++++ L L+ YG +
Sbjct: 821 ENLVSQIEPQLIHLKKFSYGKQI 843
>gi|47216145|emb|CAG10019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1287
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 86/368 (23%), Positives = 155/368 (42%), Gaps = 64/368 (17%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L S +F + ++LM +G +V KF E + +
Sbjct: 900 IMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLD 959
Query: 73 SQLALI------ILKITFQ-----------------DQLFLLASVDKFG-----SSSVKK 104
+LAL +L + Q Q+ + FG ++V++
Sbjct: 960 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVIVTGLAGGFGLFRLKGAAVQR 1019
Query: 105 LIKVV--------AHLPPLLYHVMSALKRLFKFLMM------------TKPGSSVILQCL 144
+ +V A L VMSAL + + M+ + G+ V+ +C+
Sbjct: 1020 RLWIVGPGAVVEEAFKQGLDTDVMSALSPVLQSEMVRELDGHVLKCVKDQNGNHVVQKCI 1079
Query: 145 EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSR 204
E H FI A L+ H GC + +++ + IL + + L +
Sbjct: 1080 ECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ 1139
Query: 205 HRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YII 262
+ GNYV+QHVL I +RG+ + LS K S VV+KC+ + + +I
Sbjct: 1140 DQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAERAVLI 1199
Query: 263 EELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLVTKLQQHLAALR 315
+E+ + + + + D+Y NYV+Q + AE Q ++ +H K++ H++ LR
Sbjct: 1200 DEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPT-QRKIVMH-----KIRPHISTLR 1253
Query: 316 VMKYGSNV 323
YG ++
Sbjct: 1254 KYTYGKHI 1261
>gi|258571557|ref|XP_002544582.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904852|gb|EEP79253.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1139
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 70/313 (22%), Positives = 134/313 (42%), Gaps = 61/313 (19%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L+ L +DQ G +YLQ L + +F ELM+ +G ++ K +E N+
Sbjct: 774 ELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHMHVVELMTDPFGNYLCQKLLEFSND 833
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q +I Q + ++++ G+ +++K+I+ ++ P V++AL+ L+
Sbjct: 834 EQRTALINNAAPQ---LVSIALNQHGTRALQKMIEFIS-TPEQTQTVINALRGKVVELVQ 889
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI +C L
Sbjct: 890 DLNGNHVIQKC------------------------------------------------L 901
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ +SV A + GNYVVQ++L L +P + +C G LS K S V++KC
Sbjct: 902 NRLSVADA---QDPFGNYVVQYILDLAEPHFTEPLCQTFVGKVSMLSKQKFSSNVIEKCP 958
Query: 253 KYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + +I+E+L + ++ ++ D + NYV+QTA+ + R++ L+ ++
Sbjct: 959 RTAEFQSRRLLIQEMLPAQELERMLRDSFANYVVQTAMDYADPETRVA----LIEAIRPI 1014
Query: 311 LAALRVMKYGSNV 323
L A+R +G +
Sbjct: 1015 LPAIRQTPHGRRI 1027
>gi|325096471|gb|EGC49781.1| pumilio [Ajellomyces capsulatus H88]
Length = 876
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 27/325 (8%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L S +S D++F + +LM+ +G +V K E
Sbjct: 455 NH-IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 513
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 514 NQSQKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 565
Query: 131 M---MTKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI + +E PS + + FI A LA H GC + +++
Sbjct: 566 LKCVKDQNGNHVIQKAVERVPSVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCTE 623
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
R+ +L + +SL + GNYV+QHV+ + I + + S K S
Sbjct: 624 PDRRAVLEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFAS 683
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLS 298
VV+K +++ + I+ +L + +L + D+YGNYVIQ L + +R
Sbjct: 684 NVVEKSIEFGADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLER-- 741
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+ LV K++ L L+ YG +
Sbjct: 742 --EALVKKIEPQLTQLKKFSYGKQI 764
>gi|334313569|ref|XP_003339931.1| PREDICTED: pumilio homolog 2 isoform 2 [Monodelphis domestica]
Length = 1002
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E N
Sbjct: 669 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 728
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ P ++ L +
Sbjct: 729 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 783
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + +L
Sbjct: 784 QNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLE 843
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 844 ELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEKCVS 903
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR L+
Sbjct: 904 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKVLM 957
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 958 HKIRPHVTTLRKYTYGKHI 976
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
L H + + + G + ++ + R+ + + I A L GNYV+Q
Sbjct: 666 LGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFG 725
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVAND 277
+ A+ +RGH + L+L G V+QK L+ + + +++EL +L+ D
Sbjct: 726 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKEL--DGHVLKCVKD 783
Query: 278 KYGNYVIQ 285
+ GN+V+Q
Sbjct: 784 QNGNHVVQ 791
>gi|5263312|gb|AAD41414.1|AC007727_3 Contains 3 PF|00806 Pumilio-family RNA binding domains (PUF)
[Arabidopsis thaliana]
Length = 252
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 32/234 (13%)
Query: 63 FGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSA 122
F + I ++ +L + +T FL+ + + GS ++KL+ + L +A
Sbjct: 12 FEEMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAA 68
Query: 123 LKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN 182
+ R F ++ K S V+ + + K +Y EH L+ A H
Sbjct: 69 ILRRFLHIITDKYASYVVRRGMTVFDKKKKKAMY----EHILHYASH------------- 111
Query: 183 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
+R K A LS GN+V+Q VL L D + I +LRGH+VDLS K
Sbjct: 112 --IARDKH--------ALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQK 161
Query: 243 CGSFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTALAETMRQ 294
GS+VV L+ + ++ ++EEL+ D ++++A ++YGN+++ AL T ++
Sbjct: 162 YGSYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKE 215
>gi|219110179|ref|XP_002176841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411376|gb|EEC51304.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 29/292 (9%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTF--ELMSGQYGRFVFGKFIESCNESQ 74
L++DQ G + +Q+ L + + + G F E M +G ++F K +E +
Sbjct: 6 LSRDQVGCRLVQQALDEEGT--IAATLILKEGLPFWGEAMVDPFGNYLFQKILEKVTPQE 63
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH--------------LPPLLYHVM 120
+++ ++ + + AS++ G+ SV+KL+++ A L Y +
Sbjct: 64 RIMLVKSVSPR---LVNASLNLHGTRSVQKLVELCAQDEHNQVVGANEESAADILTYSLA 120
Query: 121 SALKRLFKFLMMTKPGSSVILQCL-EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
A RL + G+ VI + L + +Y H + F++ A +A H GC +
Sbjct: 121 PAAARL----CIDSHGNHVIQRILLKLNYKH-SKFVFDAVALSVGDVARHRHGCCVIQRC 175
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
+D+ R ++ I + L + GNYVVQ+VL + + A+C ++ G L+
Sbjct: 176 LDSQPTEARSHLVLRIVDKSLELMQDAYGNYVVQYVLDVCSDQDVQAVCESVAGRVNLLA 235
Query: 240 LTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALA 289
+ K S V++KCL+ ++E+ ++I ++ D +GNYV+Q AL+
Sbjct: 236 IQKFSSNVMEKCLERCSDRIKEMYLDEMSRPERIRELMMDPFGNYVVQRALS 287
>gi|440906069|gb|ELR56374.1| Pumilio-like protein 2 [Bos grunniens mutus]
Length = 1066
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ ++ ++ L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 848 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 907
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 908 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 967
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 968 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1021
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H++ LR YG ++
Sbjct: 1022 HKIRPHISTLRKYTYGKHI 1040
>gi|302654395|ref|XP_003019005.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
gi|291182695|gb|EFE38360.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
Length = 851
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 141/319 (44%), Gaps = 32/319 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q L + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 459 DQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLA 518
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM---MTKPG 136
++ Q + L SV +G +V+K ++ V L+ + +K L +M + G
Sbjct: 519 QQM--QGNICSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNG 570
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E N FI A H GC + +++ + R IL I
Sbjct: 571 NHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIH 630
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 631 ACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFG- 689
Query: 257 AVHYIIEELLNSDQILQVAN------------DKYGNYVIQTALAETMRQDRLSVHQRLV 304
+E+ L +IL N D+YGNYVIQ +L+ D ++ LV
Sbjct: 690 ----TMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGDD----YKMLV 741
Query: 305 TKLQQHLAALRVMKYGSNV 323
+++ + L+ YG +
Sbjct: 742 SRILPLMPLLKKCSYGKQI 760
>gi|302504613|ref|XP_003014265.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
gi|291177833|gb|EFE33625.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
Length = 883
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 141/319 (44%), Gaps = 32/319 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q L + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 491 DQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLA 550
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM---MTKPG 136
++ Q + L SV +G +V+K ++ V L+ + +K L +M + G
Sbjct: 551 QQM--QGNICSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNG 602
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E N FI A H GC + +++ + R IL I
Sbjct: 603 NHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIH 662
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 663 ACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFG- 721
Query: 257 AVHYIIEELLNSDQILQVAN------------DKYGNYVIQTALAETMRQDRLSVHQRLV 304
+E+ L +IL N D+YGNYVIQ +L+ D ++ LV
Sbjct: 722 ----TMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGDD----YKMLV 773
Query: 305 TKLQQHLAALRVMKYGSNV 323
+++ + L+ YG +
Sbjct: 774 SRILPLMPLLKKCSYGKQI 792
>gi|341899697|gb|EGT55632.1| CBN-PUF-8 protein [Caenorhabditis brenneri]
Length = 531
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 147/327 (44%), Gaps = 31/327 (9%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+L A+DQ GS+++Q+ L D + D +F V EL+ +G +V KF E E
Sbjct: 199 NLLKFAKDQVGSRFIQQKLEYCDKKEKDSIFDEVVANAAELVDDIFGNYVVQKFFEYGEE 258
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
A ++ + + + + + ++K ++ V PL +++ ++ + M
Sbjct: 259 KHWAKLVDAVVERVPEY---AFQMYACRVLQKALEKVNE--PLQIKILNKVRHVIYRCMK 313
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEH---CLYLACHEQGCINLNNFIDNMKGSRRK 189
+ G+ V+ + +E FI L++ ++ GC + +++ + +
Sbjct: 314 DQNGNHVVQKAIEKVGPEYIQFIVDTLLKNHKTVFDMSVDPYGCRVVQRCLEHCIPKQTR 373
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVL---SLEDP-FLIDAICFALRGHYVDLSLTKCGS 245
I+ I ++ ++ GNYVVQHV+ + ED F+I + L + + K S
Sbjct: 374 PIIERILERFDEVTNNQYGNYVVQHVIQHGTDEDRMFIIKRVAEKL----FEFATHKYSS 429
Query: 246 FVVQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLS 298
V++KCL+ H I+ N + ++Q+ D+Y NYV+Q D+++
Sbjct: 430 NVIEKCLEEGTVYHKNMIVRSACNQPEGNMPVVVQMMKDQYANYVVQKMF------DQVT 483
Query: 299 VHQR--LVTKLQQHLAALRVMKYGSNV 323
QR L+ ++ H+ LR +G ++
Sbjct: 484 TDQRRELIQTVRPHIPVLRQFPHGKHI 510
>gi|440299619|gb|ELP92171.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
invadens IP1]
Length = 408
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 140/318 (44%), Gaps = 16/318 (5%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
D +L+QDQ GS+ +Q + + S D +F + L + +V K E
Sbjct: 90 EDYLTLSQDQSGSRVVQHKIETSTSD-RDAIFDGIEAEAVHLSKDVFANYVIQKLFEFGT 148
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q + + ++T F+ S+ +G V+K I+ V + + + ++ +
Sbjct: 149 VWQKSQLTKRLT---GCFVELSLHMYGCRVVQKAIEFVDDIDKRT--IFNEIEENIVACI 203
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
+ G+ VI +C+E D I A L + H GC + ++ + + +
Sbjct: 204 QDQNGNHVIQKCVEKGDTRIIDAIISAFQGRVLAFSQHPYGCRVIQRILEKIPTEKSYPL 263
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
L I N LS+ + GNYV+Q+++ P I AL+G +LS+ K S V++KC
Sbjct: 264 LQEILPNTLELSKDQYGNYVIQYIVE-RCPTERTKIRRALQGSIAELSMQKYSSNVIEKC 322
Query: 252 LKYQNAV--HYIIEELLNSDQ----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
NA +++E+ + + +L + D+Y NYV+Q + +R + +V
Sbjct: 323 FMCANAKGRQEMLKEIYGTKREGTPLLMMMRDQYANYVVQKIIENVSDTEREFMVNNVVL 382
Query: 306 KLQQHLAALRVMKYGSNV 323
+++LR + Y ++
Sbjct: 383 P---QISSLRKVPYAKHI 397
>gi|158828185|gb|ABW81064.1| AlMpt5-2 [Arabidopsis lyrata subsp. lyrata]
Length = 949
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 22/288 (7%)
Query: 46 VSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKL 105
++G E S QYG + +E+ + ++ +I Q L L+ V FG+ ++K
Sbjct: 637 IAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQ-ALALMTDV--FGNYVIQKA 693
Query: 106 IKVVAHLPPLLYHVMSALKRLFKFLMM---TKPGSSVILQCLEPSYNHKNDFIYQAALEH 162
I+VV L + +K L +M + G+ V+ +C+E +FI +
Sbjct: 694 IEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGN 748
Query: 163 CLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
+ L+ H GC + +++ + +++ I + L++ + GNYV+QHVL P
Sbjct: 749 VVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKP 808
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAV--HYIIEELLNS---DQILQ-VA 275
I L G V +S K S VV+KCL + +++ E+L + ++ LQ +
Sbjct: 809 DERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMM 868
Query: 276 NDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D++ NYV+Q L Q R + ++ +++ HL AL+ YG ++
Sbjct: 869 KDQFANYVVQKVLETCDDQQR----ELILGRIKVHLNALKKYTYGKHI 912
>gi|357608364|gb|EHJ65955.1| putative pumilio [Danaus plexippus]
Length = 712
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 17/304 (5%)
Query: 26 YLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQ 85
++Q+ L + +F + G + LM+ +G +V KF E Q + K+
Sbjct: 394 FIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEFGTTEQKTTLAQKVRGH 453
Query: 86 DQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLE 145
L ++ +G ++K ++ + P V+ L + + G+ V+ +C+E
Sbjct: 454 ---VLALALQMYGCRVIQKALESIP--PEQQQEVVRELDGHVLKCVKDQNGNHVVQKCIE 508
Query: 146 PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 205
FI A L+ H GC + +++ + +L + + L +
Sbjct: 509 CVEPAALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTAEQTAPVLAELHAHTDQLIQD 568
Query: 206 RSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIE 263
+ GNYVVQHVL + +RG + LS K S VV+KC+ + +N +I+
Sbjct: 569 QYGNYVVQHVLEHGAAEDRSRLVAGVRGKVLQLSQHKFASNVVEKCVTHATRNERALLID 628
Query: 264 EL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTKLQQHLAALRVMKY 319
EL N + + + D+Y NYV+Q + D QR L+ K++ H+ +LR Y
Sbjct: 629 ELCGFNDNALHVMMKDQYANYVVQKMI------DVAEPTQRKVLMHKIRPHIGSLRKYTY 682
Query: 320 GSNV 323
G ++
Sbjct: 683 GKHI 686
>gi|410258978|gb|JAA17455.1| pumilio homolog 2 [Pan troglodytes]
gi|410298914|gb|JAA28057.1| pumilio homolog 2 [Pan troglodytes]
gi|410335701|gb|JAA36797.1| pumilio homolog 2 [Pan troglodytes]
Length = 1067
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 139/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ ++ ++ L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 848
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 849 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 908
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 909 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 968
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 969 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1022
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1023 HKIRPHITTLRKYTYGKHI 1041
>gi|308502562|ref|XP_003113465.1| CRE-PUF-8 protein [Caenorhabditis remanei]
gi|308263424|gb|EFP07377.1| CRE-PUF-8 protein [Caenorhabditis remanei]
Length = 536
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 150/324 (46%), Gaps = 27/324 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A+DQ GS+++Q+ L DS+ D +F V EL+ +G +V KF E E
Sbjct: 201 VIKFAKDQVGSRFIQQKLEFCDSKEKDAIFDEVVAHAPELVDDIFGNYVVQKFFEYGEEK 260
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
A ++ + D++ A + ++K ++ V+ PL +++ ++ + M
Sbjct: 261 HWARLVDAVV--DRIPEYA-FQMYACRVLQKALEKVSE--PLQIKILARVRHVIHRCMKD 315
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEH--CLY-LACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + +E FI LE+ +Y ++ GC + +++ + +
Sbjct: 316 QNGNHVIQKAIEKVSPPYVQFIVSTLLENPDTIYDMSVDPYGCRVVQRCLEHCIPQQTRP 375
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
++ I ++ ++ GNYVVQHV+ S D L I + + + S K S V
Sbjct: 376 VIERIHERFDDIANNQYGNYVVQHVILHGSDADRML---IVNRVADNLFEFSTHKYSSNV 432
Query: 248 VQKCLKYQNAVHY---IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSV 299
++KCL+ + A+H+ ++ + + ++Q+ D+Y NYV+Q + R
Sbjct: 433 IEKCLE-RGAIHHKAMLVGAACSQPEGCMPIVVQMMKDQYANYVVQKMFDQVTSDQR--- 488
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ ++ H+ LR +G ++
Sbjct: 489 -RELILTVRSHIPVLRQFPHGKHI 511
>gi|228312515|pdb|3H3D|X Chain X, Drosophila Pumilio Rna Binding Domain (Puf Domain)
gi|228312516|pdb|3H3D|Y Chain Y, Drosophila Pumilio Rna Binding Domain (Puf Domain)
Length = 323
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 147/313 (46%), Gaps = 22/313 (7%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
NH + +QDQ GS+++Q+ L + +F + + LM+ +G +V KF E
Sbjct: 25 ANH-IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 83
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
Q + +++ L ++ +G ++K ++ ++ P ++ L
Sbjct: 84 GTPEQKNTLGMQVKGH---VLQLALQMYGCRVIQKALESIS--PEQQQEIVHELDGHVLK 138
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 139 CVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTT 198
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLS---LEDP-FLIDAICFALRGHYVDLSLTKCGS 245
IL + + L + + GNYV+QHVL ED LI+++ RG + LS K S
Sbjct: 199 PILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFAS 254
Query: 246 FVVQKCLKY--QNAVHYIIEEL--LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
VV+KC+ + + +I+E+ N + + + D+Y NYV+Q + + +L +
Sbjct: 255 NVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQ-KMIDVSEPTQL---K 310
Query: 302 RLVTKLQQHLAAL 314
+L+TK+++++AAL
Sbjct: 311 KLMTKIRKNMAAL 323
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ VI + E + + + H L LA GC + ++++ +++
Sbjct: 67 LMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQ 126
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+I+H + + + ++GN+VVQ + DP + I A +G LS G V+Q
Sbjct: 127 EIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQ 186
Query: 250 KCLKYQNAVHY--IIEEL-LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
+ L++ A I++EL +++Q++Q D+YGNYVIQ L ++D+ S+ L+
Sbjct: 187 RILEHCTAEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVLEHGKQEDK-SI---LINS 239
Query: 307 LQQHLAALRVMKYGSNV 323
++ + L K+ SNV
Sbjct: 240 VRGKVLVLSQHKFASNV 256
>gi|224126149|ref|XP_002329672.1| predicted protein [Populus trichocarpa]
gi|222870553|gb|EEF07684.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 112/243 (46%), Gaps = 23/243 (9%)
Query: 90 LLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYN 149
+L KF + V +L + + L HVM ++ + G+ VI +C+E
Sbjct: 12 VLVLATKFQALDVIELDQKAQLVRELDGHVMKCVR--------DQNGNHVIQKCIESVPA 63
Query: 150 HKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNAASLSRHRSG 208
K FI A L+ H GC + ++ + Q I+ I + L++ + G
Sbjct: 64 EKIGFIISAFRGEVATLSMHPYGCRVIQRVLERCADELQCQFIVDEILESVCILAQDQYG 123
Query: 209 NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAV--HYIIEELL 266
NYV QHVL P I L GH V LS K S VV+KCL+Y A II+E+L
Sbjct: 124 NYVTQHVLERGKPQERCQIISKLSGHIVTLSQHKFASNVVEKCLEYGGATEREIIIQEIL 183
Query: 267 ----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR--LVTKLQQHLAALRVMKYG 320
+D +L + D+Y NYV+Q L D + QR L+ +++ H+ AL+ YG
Sbjct: 184 GQNEGNDNLLIMMKDQYANYVVQKIL------DTCTDIQRAMLLNRIRTHVHALKKYTYG 237
Query: 321 SNV 323
++
Sbjct: 238 KHI 240
>gi|281344230|gb|EFB19814.1| hypothetical protein PANDA_002991 [Ailuropoda melanoleuca]
Length = 1049
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 141/319 (44%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 714 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 773
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ ++ ++ ++ L +
Sbjct: 774 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 830
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 831 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 890
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 891 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 950
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 951 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1004
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1005 HKIRPHITTLRKYTYGKHI 1023
>gi|12082247|dbj|BAB20864.1| pumilio [Xenopus laevis]
Length = 576
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 146/323 (45%), Gaps = 26/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q+ L +F + ++LM G +V KF E + E
Sbjct: 241 IVEFSQDQHGSRFIQQKLERASPAERQLVFNEILQAAYQLMVDVIGNYVIQKFFEFGSLE 300
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + PP + ++ L ++
Sbjct: 301 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLK 353
Query: 133 ---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 354 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTL 413
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+
Sbjct: 414 PILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVE 473
Query: 250 KCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVH 300
KC+ + + +I+E+ + + + D+Y NYV+Q + AE Q ++ +H
Sbjct: 474 KCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH 532
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 533 -----KIRPHIATLRKYTYGKHI 550
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D ++++++ + G + + Q G
Sbjct: 301 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNG 360
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 361 NHVVQKCIECVQPQSLQFII--DAFKSQVFAL-STHPYGCRVIQRILEHC--LPEQTLPI 415
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 416 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 475
Query: 180 IDNMKGSRRKQILHLI-SVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + ++N ++ + + NYVVQ ++ + +P + +R
Sbjct: 476 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIR 535
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 536 PHIATLRKYTYGKHILAKLEKY 557
>gi|348574640|ref|XP_003473098.1| PREDICTED: pumilio homolog 2 isoform 2 [Cavia porcellus]
Length = 989
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E N
Sbjct: 656 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 715
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 716 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 769
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 770 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 824
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 825 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 884
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 885 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 938
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 939 QRKIIMHKIRPHITTLRKYTYGKHI 963
>gi|355565487|gb|EHH21916.1| hypothetical protein EGK_05087 [Macaca mulatta]
gi|355751134|gb|EHH55389.1| hypothetical protein EGM_04593 [Macaca fascicularis]
gi|380811082|gb|AFE77416.1| pumilio homolog 2 [Macaca mulatta]
gi|383417011|gb|AFH31719.1| pumilio homolog 2 [Macaca mulatta]
Length = 1067
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 139/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ ++ ++ L +
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 848
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 849 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 908
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 909 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 968
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 969 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1022
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1023 HKIRPHITTLRKYTYGKHI 1041
>gi|41688714|sp|Q8TB72.2|PUM2_HUMAN RecName: Full=Pumilio homolog 2; Short=Pumilio-2
gi|119621229|gb|EAX00824.1| pumilio homolog 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1066
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 139/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ ++ ++ L +
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 848 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 907
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 908 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 967
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 968 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1021
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1022 HKIRPHITTLRKYTYGKHI 1040
>gi|67474034|ref|XP_652766.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56469651|gb|EAL47380.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702370|gb|EMD43022.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 438
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 138/291 (47%), Gaps = 20/291 (6%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ L L +DQ+GS+ +Q+ +D++F ++ + ELM +G +V K +E
Sbjct: 120 YSLPELCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEYGT 179
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ + L+ K+ Q + L S+ +G ++K+I+V++ P + + S +K +
Sbjct: 180 KKHVHLLFEKL--QGNVVKL-SLHMYGCRVIQKIIEVLS--PEEVRIISSEIKSNVSTFI 234
Query: 132 MTKPGSSVILQCL----EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI + + E N D IY A+E+ + H GC + I+ +
Sbjct: 235 EDQNGNHVIQKFIDFASEIDLNFMIDEIYTRAVEY----SKHPYGCRVIQRLIEKNSQNC 290
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
K++ + LS ++ GNYV+QH++ I ++G + S+ K S V
Sbjct: 291 VKRVTDKLVEYVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNV 350
Query: 248 VQKCLK--YQNAVHYIIEELLNSD----QILQVANDKYGNYVIQTALAETM 292
V+KC++ ++ EL NS+ QI ++ D Y NYVIQ L E M
Sbjct: 351 VEKCIRCCETREQTILVNELCNSNVTNKQINEMICDPYANYVIQ-RLIEMM 400
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM+ G+ VI + +E +++ + + L+ H GC + I+ + +
Sbjct: 161 LMIDLFGNYVIQKLVEYGTKKHVHLLFEKLQGNVVKLSLHMYGCRVIQKIIEVLSPEEVR 220
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I I N ++ ++GN+V+Q + ++ + + V+ S G V+Q
Sbjct: 221 IISSEIKSNVSTFIEDQNGNHVIQKFIDFASEIDLNFMIDEIYTRAVEYSKHPYGCRVIQ 280
Query: 250 KCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+ ++ QN V + ++L+ + + +++ ++YGNYVIQ + + R+ + V +
Sbjct: 281 RLIEKNSQNCVKRVTDKLV--EYVWELSINQYGNYVIQHLIQYGTNEQRVEI----VNNI 334
Query: 308 QQHLAALRVMKYGSNV 323
+ L + KY SNV
Sbjct: 335 KGKLYEYSMKKYSSNV 350
>gi|440302927|gb|ELP95233.1| pumilio domain containing protein C4G8.03C, putative [Entamoeba
invadens IP1]
Length = 549
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 154/331 (46%), Gaps = 33/331 (9%)
Query: 6 FEHCTNHDLFSLAQDQEGSQYLQENLSSG--DSRILDKLFWVVSGFTFELMSGQYGRFVF 63
E D +++++ GS+ +Q+N+ G D R+ ++ + EL + + +V
Sbjct: 227 MEQNAPADYVAMSKEHHGSRSVQQNIEKGTADERLT--IWRAIQSHIVELSADLFANYVI 284
Query: 64 GKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSAL 123
K +E ES+ A+ ++ + L ++ +G V+K ++ Y M
Sbjct: 285 QKALEFVPESRHAV---PAQMKNNVLRL-TLHMYGCRVVQKAVE---------YAAMKDR 331
Query: 124 KRLFKFL-------MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLAC--HEQGCI 174
K LF+ L + + G+ VI +C+E + +A + + L C H GC
Sbjct: 332 KLLFEELRGHLVQCIEDQNGNHVIQKCVEKGDRSMVMDVVKAL--NGIVLECCRHPYGCR 389
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
+ I+++ +L +I + +L+ + GNYVVQ+VL I L+G+
Sbjct: 390 VVQRVIESVDYDCVVDLLKIIEPQSLNLTEDQYGNYVVQNVLERGYDNDRHIILTKLKGN 449
Query: 235 YVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETM 292
V LS+ K S V++KC K+ QN I+EE+ +D I+++ D++ NYV+Q +
Sbjct: 450 IVRLSMGKYSSNVIEKCFKHATQNERAQILEEIYVNDGIVKMMQDQFANYVVQKIIEAVN 509
Query: 293 RQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
DR + + + + ++A L+ + Y ++
Sbjct: 510 DVDREKIVEGFI---KPNIALLKKVSYTKHI 537
>gi|407928197|gb|EKG21067.1| hypothetical protein MPH_01611 [Macrophomina phaseolina MS6]
Length = 943
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 18/279 (6%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +S +++F + +LM+ +G +V KF E ++SQ ++
Sbjct: 554 DQHGSRFIQQKLETANSDEKERVFKEIQPNAMQLMTDVFGNYVIQKFFEHGDQSQKRILA 613
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
K+ L S+ +G V+K ++ V L+ +K L ++ + G
Sbjct: 614 NKMKGH---VLTLSLQMYGCRVVQKALEHV-----LVDQQADMVKELENNVLRCVKDQNG 665
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E FI A + H L+ H GC + +++ + R+ IL +
Sbjct: 666 NHVIQKAIERVPAQHIQFIIDAFIGHVSSLSVHGYGCRVIQRMLEHCEEPARRAILSELH 725
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL---- 252
A +L + GNYV QH++ P AI ++ + + K S VV+KCL
Sbjct: 726 ACAPTLIPDQYGNYVTQHIIEHGAPDDRAAIIEIVKTQLLAFAKHKFASNVVEKCLVFGS 785
Query: 253 --KYQNAVHYIIEELLNSDQIL-QVANDKYGNYVIQTAL 288
+ + + I E+ + L + D YGNYVIQ L
Sbjct: 786 DDERREIMLKICEKTERGESTLVMLIKDGYGNYVIQKLL 824
>gi|350585831|ref|XP_003482060.1| PREDICTED: pumilio homolog 1 isoform 2 [Sus scrofa]
Length = 594
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 259 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 318
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 319 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 374
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 375 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 434
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 435 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 494
Query: 253 KYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRL 303
+ + +I+E+ + + + D+Y NYV+Q + AE Q ++ +H
Sbjct: 495 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH--- 550
Query: 304 VTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 551 --KIRPHIATLRKYTYGKHI 568
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D ++++++ + G + + Q G
Sbjct: 319 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNG 378
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 379 NHVVQKCIECVQPQSLQFII--DAFKGQVFAL-STHPYGCRVIQRILEHC--LPDQTLPI 433
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 434 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 493
Query: 180 IDNMKGSRRKQILHLI-SVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + ++N ++ + + NYVVQ ++ + +P + +R
Sbjct: 494 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIR 553
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 554 PHIATLRKYTYGKHILAKLEKY 575
>gi|269864410|ref|XP_002651563.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
gi|220064292|gb|EED42493.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
Length = 316
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 24/291 (8%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
F + QDQEGS+++Q L S + + + F + F +L +G +V K I +
Sbjct: 33 FKVCQDQEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKE 92
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK 134
++ + F ++LL S +G ++KLI + + ++S L+ L+ +
Sbjct: 93 YDILCKR--FSGSIYLL-STHIYGCRVIQKLIDFITDIT----FIISELQDHILELIASP 145
Query: 135 PGSSVILQCLEPS---YNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +C++ S + I + C+ L+ GC L + + ++
Sbjct: 146 NGNHVIQKCIDRSIIENKIFINNIINEFEKDCISLSQQRYGCRVLQRLFEISAPEKVDRL 205
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFA-LRGHYVDLSLTKCGSFVVQK 250
L +I N L R GNYV+QH+ ++ + I F + + V+LS K S V++K
Sbjct: 206 LGIIVDNIQELINDRYGNYVIQHL--IQSNYKQKEIIFKYIISNAVELSRYKFSSNVIEK 263
Query: 251 CLKYQNAVHYIIEELL---------NSDQILQVANDKYGNYVIQTALAETM 292
C+ NA +E+ L N + + D Y NYV+Q L + M
Sbjct: 264 CVV--NASKRELEQFLESFAQLAENNKPALFYMCTDMYANYVVQNFLIQLM 312
>gi|432096853|gb|ELK27431.1| Pumilio like protein 2 [Myotis davidii]
Length = 959
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 626 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 685
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 686 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 739
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 740 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 794
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 795 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 854
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYVIQ + D
Sbjct: 855 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMI------DMAEPA 908
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 909 QRKIIMHKIRPHITTLRKYTYGKHI 933
>gi|339246841|ref|XP_003375054.1| pumilio protein [Trichinella spiralis]
gi|316971694|gb|EFV55440.1| pumilio protein [Trichinella spiralis]
Length = 369
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 141/324 (43%), Gaps = 21/324 (6%)
Query: 3 TIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFV 62
T+ TNH + AQDQ GS+++Q+ L + + +F + LM+ +G +V
Sbjct: 38 TLQLRDVTNH-VVEFAQDQYGSRFIQQKLERANMQDRQMVFSEIIESAQMLMTDVFGNYV 96
Query: 63 FGKFIESCN---ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
KF E +++LA ++ L ++ +G ++K ++ V H +
Sbjct: 97 IQKFFEFGTVEQKNELARVLRPNV------LALALQMYGCRVIQKCLEAVDH--EQQREI 148
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L+ + + G+ VI + +E F+ A + L+ H GC +
Sbjct: 149 VKELEGNILKCVKDQNGNHVIQKIIETVDPKSLQFVIDAFKDQVFALSTHSYGCRVIQRI 208
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
+++ ++K IL + + SL + GNYV+QHVL I +R + S
Sbjct: 209 LEHCMMEQKKPILEELHQHIKSLVCDQYGNYVIQHVLEHGQAEDKSRIIKEMREEILRYS 268
Query: 240 LTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
K S VV+KC+ + A EE ++ + D+Y NYV+Q L R
Sbjct: 269 QHKFASNVVEKCVCFATA-----EERNCLIILVAMMKDQYANYVVQKLLDVADPSQR--- 320
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+RL+ ++ H+ LR YG ++
Sbjct: 321 -KRLMQNIRPHVPQLRRFTYGKHI 343
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 14/244 (5%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ +LA G + +Q+ L + D ++ + G + + Q G V K IE+ +
Sbjct: 119 NVLALALQMYGCRVIQKCLEAVDHEQQREIVKELEGNILKCVKDQNGNHVIQKIIETVDP 178
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFL 130
L +I F+DQ+F L S +G ++++++ ++ P+L L + K L
Sbjct: 179 KSLQFVI--DAFKDQVFAL-STHSYGCRVIQRILEHCMMEQKKPIL----EELHQHIKSL 231
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ VI LE I + E L + H+ + + R
Sbjct: 232 VCDQYGNYVIQHVLEHGQAEDKSRIIKEMREEILRYSQHKFASNVVEKCVCFATAEERNC 291
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ L++ + + + NYVVQ +L + DP + +R H L G ++ K
Sbjct: 292 LIILVA-----MMKDQYANYVVQKLLDVADPSQRKRLMQNIRPHVPQLRRFTYGKHILSK 346
Query: 251 CLKY 254
KY
Sbjct: 347 LEKY 350
>gi|402083794|gb|EJT78812.1| hypothetical protein GGTG_03909 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 911
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 42/324 (12%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ+GS+++Q L S +S D++F + +LM +G +V KF E N Q+ I
Sbjct: 522 DQQGSRFIQTKLESANSDEKDQVFREIEPNAVQLMKDLFGNYVIQKFFEHGN--QVHKKI 579
Query: 80 LKITFQDQLFLLASVDKFGSSSVKK-----LIKVVAHL-PPLLYHVMSALKRLFKFLMMT 133
L ++++ L S + V+K L++ A L L +H +S +M
Sbjct: 580 LAGQMKNRMVDL-STQMYACRVVQKALEHVLVEQQAELVKELEHHTLS--------IMQN 630
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI + +E FIY+A H L+ GC + ++ +G+ ++
Sbjct: 631 QNGNHVIQKIVELLPRQHIGFIYEAVRGHLKELSTQTYGCRVVQRMLE--QGTEEDTVVM 688
Query: 194 LISVNAA--SLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + A+ +L + GNYVVQH+++ P A+ V S K S +V+KC
Sbjct: 689 MDEIYASMTALITDQYGNYVVQHIITNGSPADQRRTIDAVMAQVVQFSKHKYASNIVEKC 748
Query: 252 LKYQNAVHYIIEELLNSDQIL------------QVANDKYGNYVIQTALAETMRQDRLSV 299
+ VH E+ +IL Q+ D+YGNYVIQ L +T+++ +
Sbjct: 749 I-----VHGTAEDRTKISEILIRTGADGINPIHQLMKDQYGNYVIQK-LVDTLQEPEKT- 801
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
V K++ +L+ G +
Sbjct: 802 --NFVMKMKPQFNSLKKNNSGRQI 823
>gi|296482387|tpg|DAA24502.1| TPA: pumilio homolog 2 [Bos taurus]
Length = 370
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 144/333 (43%), Gaps = 40/333 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 29 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 88
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 89 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 142
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQA-----ALEHCL---YLACHEQGCINLNNF 179
+ G+ V+ +C+E FI A +C L+ H GC +
Sbjct: 143 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQFISSNCFKVFVLSTHPYGCRVIQRI 197
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
+++ + IL + + L + + GNYV+QHVL P I +RG + LS
Sbjct: 198 LEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALS 257
Query: 240 LTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETM 292
K S VV+KC+ + + +I+E+ + + + D+Y NYV+Q +
Sbjct: 258 QHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI---- 313
Query: 293 RQDRLSVHQR--LVTKLQQHLAALRVMKYGSNV 323
D QR ++ K++ H++ LR YG ++
Sbjct: 314 --DMAEPAQRKIIMHKIRPHISTLRKYTYGKHI 344
>gi|11139702|gb|AAG31805.1|AF315590_1 Pumilio 2 [Mus musculus]
Length = 1066
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 141/319 (44%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ ++ ++ ++ L +
Sbjct: 791 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 848 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 907
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 908 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 967
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 968 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1021
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1022 HKIRPHITTLRKYTYGKHI 1040
>gi|395508976|ref|XP_003758783.1| PREDICTED: pumilio homolog 2 isoform 2 [Sarcophilus harrisii]
Length = 1002
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E N
Sbjct: 669 IVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLD 728
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 729 QKLSLTTRIRGH---VLPLALQMYGCRVIQKALESISPDQQNDMVKELDGHVLKCVK--- 782
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 783 -----DQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTVEQ 837
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+L + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 838 TLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNV 897
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 898 VEKCVSHASRAERALLIDEICCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPG 951
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR L+ K++ H+ LR YG ++
Sbjct: 952 QRKVLMHKIRPHVTTLRKYTYGKHI 976
>gi|62718869|emb|CAG25892.1| Pumilio homolog [Dugesia japonica]
Length = 925
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 155/367 (42%), Gaps = 57/367 (15%)
Query: 1 LQTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGR 60
L T+ + + H + AQDQ GS+++Q+ L +F + + LM+ +G
Sbjct: 542 LTTLTLQDISGH-VVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPQCYSLMTDVFGN 600
Query: 61 FVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVM 120
+V +F + Q+ ++ +I Q L S+ +G ++K ++ V+ + +++
Sbjct: 601 YVIQRFFDLGTPEQIQILGDRIRNQ---VLQLSLQMYGCRVIQKALETVSKV--TQINIV 655
Query: 121 SALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
L+ + + G+ V+ +C+E DFI A ++ L+ H GC + +
Sbjct: 656 RELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRIL 715
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
++ + IL + L + + GNYV+QHVL I LRG V+LS+
Sbjct: 716 EHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSI 775
Query: 241 TKCGSFVVQKCLKY--QNAVHYIIEELLN-------SDQILQVAN--------------- 276
K S VV+K + + + +I E+L S+ I++ A+
Sbjct: 776 HKFASNVVEKAVAHATRQERQALINEVLQDSIPVSASNAIMRTADVSGVVYGSETDGSDT 835
Query: 277 -----------------DKYGNYVIQTAL---AETMRQDRLSVHQRLVTKLQQHLAALRV 316
D++ NYVIQ L + MR++ L+ K+ HL +LR
Sbjct: 836 DGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKE-------LMPKINPHLGSLRK 888
Query: 317 MKYGSNV 323
G ++
Sbjct: 889 SPSGKHI 895
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 22/135 (16%)
Query: 204 RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK----CLKYQNA-- 257
+ ++GN+VVQ + P +D I A + + LS G V+Q+ C Q A
Sbjct: 667 KDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPI 726
Query: 258 ---VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
+H+ EEL+ D+YGNYVIQ L +D+ ++V L+ + L
Sbjct: 727 LAELHHFTEELVK---------DQYGNYVIQHVLEHGKTEDK----SKIVNLLRGRIVEL 773
Query: 315 RVMKYGSNVYKWTTA 329
+ K+ SNV + A
Sbjct: 774 SIHKFASNVVEKAVA 788
>gi|357153506|ref|XP_003576473.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
[Brachypodium distachyon]
Length = 445
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 22 EGSQYLQENLSSG---DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 78
+ Q + + L SG D++I+ L + + L+ +G + + CN S LI
Sbjct: 140 KNEQMVLDTLFSGSPVDAQIVADL---IVRYAVHLLESSHGNRLLDLVLNHCNHSLHGLI 196
Query: 79 ILKITFQDQLFLLASVDKFGSSSVKKLIKV---VAHLPPLLYHVMSALKRLFKFLMMTKP 135
+ +IT DK S V ++I+ V L L +M + ++T
Sbjct: 197 VARIT----------RDKNRSDEVARVIRSCRSVKSLQLLRNAIMPWIAPSMMHQLVTDS 246
Query: 136 GS----SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
+QC+ Y K FI+ A ++CL LA G L + +++ + + + +
Sbjct: 247 NRLRVVQAFVQCVPDPYFAK--FIFDAIAKNCLALAYGSHGVSLLRSCLEHAEWTEKDDV 304
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
L IS + L+++R GNY+VQ VL +P + I R +YV LS + S VV+ C
Sbjct: 305 LSKISCWSIELAQNRFGNYIVQDVLKQRNPSHLAIIASCFRNNYVLLSKQRYSSNVVETC 364
Query: 252 LK-YQNAVH-YIIEELLNSDQILQVANDKYGNYVIQTALA 289
L+ + +A +II+EL+ + ++ NYVI AL
Sbjct: 365 LQVFVDAERFFIIDELIWCPHFKDLVTHEFANYVISRALG 404
>gi|196010159|ref|XP_002114944.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
gi|190582327|gb|EDV22400.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
Length = 488
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 144/334 (43%), Gaps = 42/334 (12%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ GS+++Q+ L + +F + ++LM+ +G +V KF E
Sbjct: 145 NH-IVEFSQDQHGSRFIQQKLERATTAEKQLVFNEIINSAYDLMTDVFGNYVIQKFFEFG 203
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALK 124
+ Q L+ ++ L ++ +G ++K ++ + + L HV+ +K
Sbjct: 204 SSEQKQLLAERVKGH---VLPLALQMYGCRVIQKALESIPVEQQTEVVKELDGHVLKCVK 260
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ V+ +C+E FI A + L+ H GC + +++
Sbjct: 261 --------DQNGNHVVQKCIECVSPSALQFIINAFKKQVFSLSTHPYGCRVIQRILEHCT 312
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLS---LEDPFLIDAICFALRGHYVDLSLT 241
+ + IL + L + GNYV+QHVL LED I L G V+LS
Sbjct: 313 PEQTEPILDELHEATEQLVLDQYGNYVIQHVLEHGRLEDK---SKIISKLTGKIVELSQH 369
Query: 242 KCGSFVVQKCLKYQNAVHY--IIEELL--------NSDQILQVANDKYGNYVIQTALAET 291
K S V++KC+ + ++EE+ N+ + + D++ NYVIQ +
Sbjct: 370 KFASNVIEKCVSHSTKAERALLVEEVCSSHSDSNQNNSGLYTMMKDQFANYVIQKMI--- 426
Query: 292 MRQDRLSVHQR--LVTKLQQHLAALRVMKYGSNV 323
D QR L+ K++ LR YG ++
Sbjct: 427 ---DMADSPQRKILIQKIRPFTGVLRKYTYGKHI 457
>gi|327309080|ref|XP_003239231.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
gi|326459487|gb|EGD84940.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
Length = 910
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 141/319 (44%), Gaps = 32/319 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q L + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 518 DQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLA 577
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM---MTKPG 136
++ Q + L SV +G +V+K ++ V L+ + +K L +M + G
Sbjct: 578 QQM--QGNICSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNG 629
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E N FI A H GC + +++ + R IL I
Sbjct: 630 NHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIH 689
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 690 ACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFG- 748
Query: 257 AVHYIIEELLNSDQILQVAN------------DKYGNYVIQTALAETMRQDRLSVHQRLV 304
+E+ L +IL N D+YGNYVIQ +L+ D ++ LV
Sbjct: 749 ----TMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGDD----YKMLV 800
Query: 305 TKLQQHLAALRVMKYGSNV 323
+++ + L+ YG +
Sbjct: 801 SRILPLMPLLKKCSYGKQI 819
>gi|255945903|ref|XP_002563719.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588454|emb|CAP86563.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 906
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 152/326 (46%), Gaps = 29/326 (8%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S +++F + +LM+ +G +V K E
Sbjct: 493 NH-VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 551
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
N++Q ++ ++ L S +G V+K ++ + A + L HV+ ++
Sbjct: 552 NQTQKKILANQMRGH---VLALSTQMYGCRVVQKALEHILTDQQAAMVKELENHVLKCVR 608
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI + +E + FI A LA H GC + +++ +
Sbjct: 609 --------DQNGNHVIQKAIERVPSQYVQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCE 660
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
R+ IL + ++L + GNYV+QHV+ D + + G + S K
Sbjct: 661 EVDRQSILAELHACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFA 720
Query: 245 SFVVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRL 297
S VV+K +++ ++ ++II L +++ +L + D+YGNYVIQ L + +R
Sbjct: 721 SNVVEKSIEFGAEHERNHIISTLTSTNDRGESPLLGLMRDQYGNYVIQKVLGQLKDAER- 779
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ +++ L+ L+ YG +
Sbjct: 780 ---EALIEQIKPLLSQLKKFSYGKQI 802
>gi|16209558|gb|AAL14121.1| pumilio-like protein 1 [Xenopus laevis]
Length = 692
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 146/323 (45%), Gaps = 26/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 357 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 416
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + PP + ++ L ++
Sbjct: 417 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLK 469
Query: 133 ---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 470 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTL 529
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+
Sbjct: 530 PILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQDKFASNVVE 589
Query: 250 KCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVH 300
KC+ + + +I+E+ + + + D+Y NYV+Q + AE Q ++ +H
Sbjct: 590 KCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH 648
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 649 -----KIRPHIATLRKYTYGKHI 666
>gi|237649070|ref|NP_109648.2| pumilio homolog 2 isoform 1 [Mus musculus]
gi|237649081|ref|NP_001153691.1| pumilio homolog 2 isoform 1 [Mus musculus]
gi|41688655|sp|Q80U58.2|PUM2_MOUSE RecName: Full=Pumilio homolog 2
gi|13919630|gb|AAK21966.1| PUM1 [Mus musculus]
gi|148665992|gb|EDK98408.1| pumilio 2 (Drosophila) [Mus musculus]
Length = 1066
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 141/319 (44%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ ++ ++ ++ L +
Sbjct: 791 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKD 847
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 848 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 907
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 908 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 967
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 968 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1021
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1022 HKIRPHITTLRKYTYGKHI 1040
>gi|268579547|ref|XP_002644756.1| C. briggsae CBR-PUF-9 protein [Caenorhabditis briggsae]
Length = 709
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 148/327 (45%), Gaps = 29/327 (8%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ A+DQ GS+++Q+ L R +F V ELM+ +G +V KF E N
Sbjct: 346 NVIEYAKDQHGSRFIQQKLERASPRDKAVIFTPVLENAEELMTDVFGNYVIQKFFEFGNN 405
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q L++ T + + LA + +G ++K ++ V + ++ ++ +
Sbjct: 406 EQRNLLVG--TIRGNVMKLA-LQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCVK 460
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAAL----EHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ VI + +E + FI A ++ L+ H GC + ++ ++
Sbjct: 461 DQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCSDDQK 520
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVL-----SLEDPFLIDAICFALRGHYVDLSLTKC 243
+ +L + ++ L + GNYV+QHV+ S ++ + D I L + + K
Sbjct: 521 QPVLDALHIHLKQLVLDQYGNYVIQHVIEHGSASDKEKIVQDVISDDL----LKFAQHKF 576
Query: 244 GSFVVQKCLKYQNAV--HYIIEELLN-----SDQILQVANDKYGNYVIQTALAETMRQDR 296
S V++KCL Y + II+++ S +LQ+ D + NYV+Q L Q R
Sbjct: 577 ASNVIEKCLTYGGHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHR 636
Query: 297 LSVHQRLVTKLQQHLAALRVMKYGSNV 323
+++ ++ H+A LR +G ++
Sbjct: 637 ----KKITLTIKPHIATLRKYNFGKHI 659
>gi|300706085|ref|XP_002995351.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
gi|239604391|gb|EEQ81680.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
Length = 512
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 151/319 (47%), Gaps = 20/319 (6%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+++DQEGS+ +Q + + F + ++L S +G +V K + NESQ
Sbjct: 207 MSKDQEGSRLIQNRIDISTENEIAWFFSQIEDSIYDLSSNLFGNYVIQKILPLLNESQKF 266
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+ + F+ +++ L S+ +G ++KL+ + ++ +K+ L+ + G
Sbjct: 267 TVFTE--FKSRIYDL-SLHPYGCRVIQKLMDCFE----CIDFIIEEIKQDIFCLIEDQNG 319
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E S + + I + ++L+ H GC + ++ + K+IL ++
Sbjct: 320 NHVIQKYIEKSPDK--NLIIDVFKKDPIFLSTHRYGCRVIQRLLEFCVEADVKKILQILI 377
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL---- 252
N SL + GNYV+QH+L++ D +A+ + + +LS K S V+++C+
Sbjct: 378 SNLESLVNDQYGNYVIQHMLTISDDSERNAVISQIINNCYNLSKFKFSSNVIEQCIVISD 437
Query: 253 --KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ ++ +E +I + D YGNYV+Q +T+ + +++ L+
Sbjct: 438 HEQKNRFLNKFLEVSGGKPRIFNMCTDMYGNYVVQ-KFYDTVDN---ASKEKIRKSLKPF 493
Query: 311 LAALRVMKYGSNV-YKWTT 328
L L+ + + ++ YK T
Sbjct: 494 LKDLKRINFARHILYKINT 512
>gi|387594744|gb|EIJ89768.1| hypothetical protein NEQG_00538 [Nematocida parisii ERTm3]
gi|387596408|gb|EIJ94029.1| hypothetical protein NEPG_00694 [Nematocida parisii ERTm1]
Length = 461
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 144/313 (46%), Gaps = 24/313 (7%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
++++DQEGS+++Q+ L S +D F + + EL+ +G +V KF+E Q
Sbjct: 150 AISKDQEGSRFIQKKLDSATIEEIDITFEEICPWISELIVDLFGNYVVQKFLEIGTTEQR 209
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
I + + + ++ +G ++K ++ + ++ +K L+ +
Sbjct: 210 EKIFFAM---ESTIISLALHMYGCRVIQKALEC----KDINRKIVEKIKGHVIDLVCDQN 262
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ V+ +C+E +DF+ + E + L+ H GC + +N ++ + I
Sbjct: 263 GNHVVQKCVECV---DSDFVIKEFEEDAVSLSRHRYGCRVIQRIFEN--STKCASAIDKI 317
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL--K 253
NA L + GNYV+QH+L I L + + S+ K S V++KC+
Sbjct: 318 ISNAKLLVEDQYGNYVIQHILEKGTHAHKRKIITELSDNIAEYSIHKFASNVMEKCVICG 377
Query: 254 YQNAVHYIIEELLNS------DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
Y++++L ++ D ++ + DK+GNYV+Q L D+ + L++ L
Sbjct: 378 TSEDRRYMLKQLKSAVGPAGEDLLVHITMDKFGNYVVQRLLDVLTGADK----EVLMSHL 433
Query: 308 QQHLAALRVMKYG 320
+ ++A L+ Y
Sbjct: 434 RANIADLKKSSYA 446
>gi|291387140|ref|XP_002710094.1| PREDICTED: pumilio homolog 2-like isoform 1 [Oryctolagus cuniculus]
Length = 986
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 712
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 713 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 766
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 767 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 821
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 822 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 881
Query: 248 VQKCLKYQNAVHY--IIEEL-LNSD----QILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ SD + + D+Y NYV+Q + D
Sbjct: 882 VEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 935
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 936 QRKIIMHKIRPHITTLRKYTYGKHI 960
>gi|290973641|ref|XP_002669556.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
gi|284083105|gb|EFC36812.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
Length = 788
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 23/326 (7%)
Query: 12 HDLFS----LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFI 67
HD+ ++DQ GS+++Q+ L + + +F + + LM+ +G +V KF
Sbjct: 460 HDIVGHVVEFSRDQHGSRFIQQKLEKASNSEKELIFKEIQPYALSLMTDVFGNYVIQKFF 519
Query: 68 ESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
E N Q L Q + L ++ +G ++K ++V+ + V+S LK
Sbjct: 520 EFGNAPQKKK--LSKELQGNVLNL-TLQTYGCRVIQKALEVIDND--DKDTVVSELKGNV 574
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI +C+E FI A H GC + +++ +
Sbjct: 575 MRCVQDQNGNHVIQKCIERVPPKIIQFIVDGFKGKVYEQAIHNYGCRVIQRILEHCTEGQ 634
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL I N +L GNYVVQHVL P I AL +LS+ K S V
Sbjct: 635 TVPILQEILDNILALVVDPYGNYVVQHVLDRGKPTFKSLIIAALSKKIQELSINKFASNV 694
Query: 248 VQKCLK------YQNAVHYIIEELLNSD----QILQVANDKYGNYVIQTALAETMRQDRL 297
++KC + N + +I ++ + D + + D++ NYVIQ + R
Sbjct: 695 IEKCFQQANKKERDNMITELIGDITSRDISETPLFAMMKDQFANYVIQKIIETCDASQRK 754
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
++ ++ H ++ + YG ++
Sbjct: 755 TI----TEAVKPHQEKIKKLPYGKHI 776
>gi|384245702|gb|EIE19195.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 945
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 46/316 (14%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVV---SGFTFELMSGQYGRFVFGKFIESC 70
++ L +DQ GS+++Q + + + F V +LM+ +G +V KF++
Sbjct: 485 VYDLCRDQFGSRFIQMKIETASPEEVAAAFTEVCVNKDPALQLMNDVFGNYVVQKFLDFG 544
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
++ Q ++ I Q + L S+ +G ++K I+V+ PPL +++ LK
Sbjct: 545 DDDQKEVMAALI--QGHVKTL-SLQVYGCRVIQKAIEVL--RPPLKDSIVAELKGHVIEC 599
Query: 131 MMTKPGSSVILQCLE---PSYNHKN------DFIYQAALEHC----------------LY 165
+ + G+ VI +C+E PS + D AA +
Sbjct: 600 ISDQNGNHVIQKCIECITPSEPIADLLEELADGPEGAAAAQRSRAPLPPGKPALSAGFVP 659
Query: 166 LACHEQGCINLNNFIDNMK-GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLI 224
LA H GC + ++ + +++ ++ NA L+R GNYV+QH L+ P
Sbjct: 660 LARHPYGCRVVQRILEKCTLEDYKHRLVATVTENALDLARDTYGNYVIQHSLAFGSPEEK 719
Query: 225 DAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELL---------NSDQILQ 273
I L+ H V+LS K S VV+KCL++ ++ ++ +L +DQ+LQ
Sbjct: 720 VEIIQRLQAHIVELSTHKFASNVVEKCLEFGTRDQRRRLVSTMLGEGSGLDSAGADQLLQ 779
Query: 274 -VANDKYGNYVIQTAL 288
+ D+YGNYV+Q L
Sbjct: 780 TMTKDQYGNYVVQKTL 795
>gi|358414519|ref|XP_869549.5| PREDICTED: pumilio homolog 2 isoform 7 [Bos taurus]
gi|359070241|ref|XP_003586699.1| PREDICTED: pumilio homolog 2 isoform 3 [Bos taurus]
Length = 984
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 710
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 711 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 764
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 765 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 819
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 820 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 879
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 880 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 933
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H++ LR YG ++
Sbjct: 934 QRKIIMHKIRPHISTLRKYTYGKHI 958
>gi|291387142|ref|XP_002710095.1| PREDICTED: pumilio homolog 2-like isoform 2 [Oryctolagus cuniculus]
Length = 1065
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 845
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 846 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 900
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 901 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 960
Query: 248 VQKCLKYQNAVHY--IIEEL-LNSD----QILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ SD + + D+Y NYV+Q + D
Sbjct: 961 VEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1014
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1015 QRKIIMHKIRPHITTLRKYTYGKHI 1039
>gi|354479904|ref|XP_003502149.1| PREDICTED: pumilio homolog 2 isoform 2 [Cricetulus griseus]
Length = 986
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSLD 712
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 713 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 766
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 767 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 821
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 822 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 881
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 882 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 935
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 936 QRKIIMHKIRPHITTLRKYTYGKHI 960
>gi|402590419|gb|EJW84349.1| hypothetical protein WUBG_04743 [Wuchereria bancrofti]
Length = 399
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 35/329 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ AQDQ GS+++Q+ L + +F V+ LM+ +G +V KF E
Sbjct: 56 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTSE 115
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q IL + + LA + +G ++K ++ + P ++ ++ +
Sbjct: 116 QKN--ILTNAVKGNVMSLA-LQMYGCRVIQKALESIE--PEQQMEILKEMEGQVLKCVKD 170
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALE-----HCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ + +E + FI A + L+ H GC + +++ ++
Sbjct: 171 QNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDEQK 230
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ +L + + SL + GNYV+QHV+ SLED D I ++G + + K S
Sbjct: 231 RPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLEDR---DRIVNQVKGDVLRFAQHKFAS 287
Query: 246 FVVQKCLK-----YQNAVHYIIEELLNSDQI----LQVANDKYGNYVIQTAL--AETMRQ 294
V++KCL ++NA+ I E N + I L + D++ NYV+Q L A++
Sbjct: 288 NVIEKCLTCGEPHHKNAL--ITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVADS--- 342
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ ++++ ++ H+ ALR YG ++
Sbjct: 343 ---ALRKKMMLAIKPHIPALRKYNYGKHI 368
>gi|410955764|ref|XP_003984520.1| PREDICTED: pumilio homolog 2 isoform 1 [Felis catus]
Length = 984
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 710
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 711 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 764
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 765 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 819
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 820 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 879
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 880 VEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMI------DMAEPA 933
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 934 QRKIIMHKIRPHITTLRKYTYGKHI 958
>gi|395333575|gb|EJF65952.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 410
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 27/329 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+ + DQ GS+++Q+ L S S ++ +F +V + +LM +G +V K E
Sbjct: 52 IVEFSGDQHGSRFIQQKLESASSEEMEIVFDEIVPQYAVQLMQDVFGNYVVQKMFEYGTA 111
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLY--HVMSALKRLFKFL 130
+Q A ++ T + Q+ L S+ +G V+K I+ V +++ + ++ R K
Sbjct: 112 AQKARLV--STMEGQVLGL-SLQMYGCRVVQKAIEYVGPDQQVMFVQELSPSVLRCVK-- 166
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRK 189
G+ VI + +E + F+ A +Y L+ H GC L + + + +
Sbjct: 167 --DANGNHVIQKIIEHVVPERLAFV--NAFRGSVYELSTHPYGCRVLQRCFEYLPDEQTR 222
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+L + ++L + GNYVVQ VL P I L G +++ K S V +
Sbjct: 223 PLLDELHKYVSNLMIDQFGNYVVQFVLEHGTPQDRAMIIAKLTGQMNNMAKHKFASNVCE 282
Query: 250 KCL--KYQNAVHYIIEELLNSDQ------ILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
K L ++ +I+E++ Q ++ + D +GNYV+Q AL + + +
Sbjct: 283 KALVTADPDSRRQLIDEIMTPKQQDGPSPLMSLMKDSFGNYVLQRALTVAEGEQK----E 338
Query: 302 RLVTKLQQHLAALRVMKYGSNVYKWTTAS 330
+L++K++ HL +R +Y S K +AS
Sbjct: 339 QLISKVRPHLVNMR--RYSSAYSKHLSAS 365
>gi|449268799|gb|EMC79640.1| Pumilio like protein 2 [Columba livia]
Length = 1062
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 729 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 788
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ P ++ L +
Sbjct: 789 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 843
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 844 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 903
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 904 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 963
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 964 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1017
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1018 HKIRPHITTLRKYTYGKHI 1036
>gi|17224452|gb|AAL36981.1|AF272350_1 translational repressor pumilio [Homo sapiens]
Length = 876
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 543 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 602
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 603 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 656
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 657 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 711
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 712 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 771
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 772 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 825
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 826 QRKIIMHKIRPHITTLRKYTYGKHI 850
>gi|350582682|ref|XP_003481331.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 981
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 648 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 707
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 708 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 761
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 762 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 816
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 817 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 876
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 877 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 930
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 931 QRKIIMHKIRPHITTLRKYTYGKHI 955
>gi|320586016|gb|EFW98695.1| pumilio family mRNA-binding protein [Grosmannia clavigera kw1407]
Length = 953
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 20/310 (6%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q L + +S + +F +S T LM +G +V KF E + SQL
Sbjct: 549 DQHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVVQKFFE--HGSQLQKKY 606
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK-P-GS 137
L + ++ L S + V+K ++ + + V+ A + + + K P G+
Sbjct: 607 LAEQMRGKIVDL-STQTYACRVVQKALQHIL----VDQQVILAKELEIDVIRVVKDPNGN 661
Query: 138 SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 197
VI + +E +FI A L+ H GC + +++ ++ IL +
Sbjct: 662 HVIQKVVELVPREHINFIIDAFRGRVRELSAHNYGCRVIQRMLEHGLEEDKEMILSELHD 721
Query: 198 NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNA 257
NA L + GNYV QHV+ P + + + V +S K S VV+KC+++ A
Sbjct: 722 NAMDLINDQYGNYVAQHVIQFGKPRDREKVISRVLNQLVTMSNNKFASNVVEKCIEFGTA 781
Query: 258 V--HYIIEEL--LNSDQ---ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
I EEL L D + Q+ D+YGNYVIQ L +Q + HQ L
Sbjct: 782 ADRQRIREELSRLGPDGQPILQQMIKDQYGNYVIQKLL----KQLKGEEHQLFAEVLSVQ 837
Query: 311 LAALRVMKYG 320
L+ LR G
Sbjct: 838 LSVLRRSSTG 847
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 161 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ----HVL 216
+H + + + G + + ++ ++ + IS N L + GNYVVQ H
Sbjct: 541 DHIVEFSGDQHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVVQKFFEHGS 600
Query: 217 SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEE--LLNSD---QI 271
L+ +L + +RG VDLS VVQK L+ H ++++ +L + +
Sbjct: 601 QLQKKYLAE----QMRGKIVDLSTQTYACRVVQKALQ-----HILVDQQVILAKELEIDV 651
Query: 272 LQVANDKYGNYVIQ 285
++V D GN+VIQ
Sbjct: 652 IRVVKDPNGNHVIQ 665
>gi|295666323|ref|XP_002793712.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278006|gb|EEH33572.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 947
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 145/323 (44%), Gaps = 23/323 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L S +S D++F + + +LM+ +G +V K E
Sbjct: 534 NH-IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQLNSLQLMTDVFGNYVVQKLFEHG 592
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 593 NQSQKRILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 644
Query: 131 M---MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E FI A LA H GC + +++
Sbjct: 645 LKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCNEGD 704
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
R+ IL + +A L + GNYV+QH+L + I + + S K S V
Sbjct: 705 RQAILAELHSCSAGLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNV 764
Query: 248 VQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+K +++ ++ I++ L + +L + D+YGNYVIQ L + +R
Sbjct: 765 VEKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSER---- 820
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ LV++++ L L+ YG +
Sbjct: 821 ENLVSQIEPQLIHLKKFSYGKQI 843
>gi|73979803|ref|XP_858023.1| PREDICTED: pumilio homolog 2 isoform 5 [Canis lupus familiaris]
Length = 984
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 710
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 711 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 764
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 765 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 819
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 820 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 879
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 880 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 933
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 934 QRKIIMHKIRPHITTLRKYTYGKHI 958
>gi|227430386|ref|NP_001153077.1| pumilio homolog 1 isoform 4 [Mus musculus]
gi|74145600|dbj|BAE36209.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 757 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 816
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 817 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 872
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 873 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 932
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 933 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 992
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 993 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1046
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1047 MHKIRPHIATLRKYTYGKHI 1066
>gi|354472361|ref|XP_003498408.1| PREDICTED: pumilio homolog 1 isoform 2 [Cricetulus griseus]
Length = 1091
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 756 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 815
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 816 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 871
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 872 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 931
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 932 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 991
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 992 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1045
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1046 MHKIRPHIATLRKYTYGKHI 1065
>gi|403288167|ref|XP_003935284.1| PREDICTED: pumilio homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 987
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 654 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 713
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 714 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 767
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 768 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 822
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 823 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 882
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 883 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 936
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 937 QRKIIMHKIRPHITTLRKYTYGKHI 961
>gi|297265504|ref|XP_001095426.2| PREDICTED: pumilio homolog 2-like isoform 1 [Macaca mulatta]
Length = 986
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 712
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 713 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDMQSEMVKELDGHVLKCVK--- 766
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 767 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 821
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 822 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 881
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 882 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 935
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 936 QRKIIMHKIRPHITTLRKYTYGKHI 960
>gi|242781200|ref|XP_002479753.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218719900|gb|EED19319.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 943
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 23/323 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L S +S D++F + +LM+ +G +V K E
Sbjct: 519 NH-IVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 577
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L + +K L + +
Sbjct: 578 NQSQKRILANQMKTH---ILALSTQMYGCRVVQKALEHI-----LTDQQAAMVKELDQHV 629
Query: 131 M---MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
M + G+ VI + +E FI A + LA H GC + +++ +
Sbjct: 630 MKCVRDQNGNHVIQKAIERVPTQHIRFIIDAFKGNVNKLATHPYGCRVIQRMLEHCETPD 689
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
R+ IL + V L + GNYV+QHV+ + + ++ + + S K S V
Sbjct: 690 RESILAELHVCTELLIPDQFGNYVIQHVIENGEEKDRSVMIKSVIKNVHNFSKHKFASNV 749
Query: 248 VQKCLKY-QNAVHYIIEELLNS------DQILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+K +++ + + I LL + +L + D+YGNYVIQ L + +R
Sbjct: 750 VEKSIEFGEESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVLGQVKGSER---- 805
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ ++ +++ L+ L+ YG +
Sbjct: 806 EMIIDEIKPLLSQLKKFSYGKQI 828
>gi|86129498|ref|NP_001034381.1| pumilio homolog 2 [Gallus gallus]
gi|82569974|gb|ABB83589.1| pumilio 2 [Gallus gallus]
Length = 1061
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 787
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ P ++ L +
Sbjct: 788 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 842
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 843 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 902
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 903 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 962
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 963 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1016
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1017 HKIRPHITTLRKYTYGKHI 1035
>gi|409046090|gb|EKM55570.1| hypothetical protein PHACADRAFT_95334 [Phanerochaete carnosa
HHB-10118-sp]
Length = 372
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+ + DQ GS+++Q+ + + D +F ++ +L+ +G +V KF E NE
Sbjct: 45 VVEFSMDQHGSRFIQQKIETADEEEKQIIFDEIMPHHALKLIQDVFGNYVVQKFFEHGNE 104
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP-----LLYHVMSALKRLF 127
Q +L L T + + L S+ +G V+K I+ H+P + + + R
Sbjct: 105 LQTSL--LAKTMEGHILPL-SLQMYGCRVVQKAIE---HMPAEQQSAFVDELAGDVLRCV 158
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALE-HCLYLACHEQGCINLNNFIDNMKGS 186
K G+ VI + +E + FI AA + H LA H GC L +N+
Sbjct: 159 K----DANGNHVIQRLIESVPPERLTFI--AAFQGHVCDLATHPYGCRVLQRCFENLPEH 212
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ + +L + +A L + + GNYV+Q VL P +I L G + +S K S
Sbjct: 213 QTRVLLSEVQEHALQLMQDQFGNYVIQFVLEHGQPQDRASIVSKLHGQMLHMSRHKFASN 272
Query: 247 VVQKCL--KYQNAVHYIIEELL-----NSDQILQVANDKYGNYVIQTAL 288
VV+K L ++ +IEE++ + + + D++ NYV+Q AL
Sbjct: 273 VVEKALVMAEPSSRRALIEEVMAPRPDGPNPFVSMMKDQFANYVLQRAL 321
>gi|224048793|ref|XP_002187244.1| PREDICTED: pumilio homolog 2 [Taeniopygia guttata]
Length = 1061
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 787
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ P ++ L +
Sbjct: 788 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 842
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 843 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 902
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 903 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 962
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 963 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1016
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1017 HKIRPHITTLRKYTYGKHI 1035
>gi|417405515|gb|JAA49467.1| Putative rna-binding protein of the puf family [Desmodus rotundus]
Length = 985
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 652 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 711
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 712 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 765
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 766 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 820
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+L + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 821 TLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 880
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYVIQ + D
Sbjct: 881 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMI------DMAEPA 934
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 935 QRKIIMHKIRPHITTLRKYTYGKHI 959
>gi|351699059|gb|EHB01978.1| Pumilio-like protein 1 [Heterocephalus glaber]
Length = 1091
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 756 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 815
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 816 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 871
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 872 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCLPDQTLPIL 931
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 932 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 991
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 992 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1045
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1046 MHKIRPHIATLRKYTYGKHI 1065
>gi|119621227|gb|EAX00822.1| pumilio homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|219517887|gb|AAI43551.1| PUM2 protein [Homo sapiens]
Length = 985
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 652 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 711
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 712 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 765
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 766 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 820
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 821 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 880
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 881 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 934
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 935 QRKIIMHKIRPHITTLRKYTYGKHI 959
>gi|344280367|ref|XP_003411955.1| PREDICTED: pumilio homolog 2 [Loxodonta africana]
Length = 1067
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 734 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 793
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 794 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 847
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 848 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 902
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 903 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 962
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 963 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1016
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1017 QRKIIMHKIRPHITTLRKYTYGKHI 1041
>gi|212722650|ref|NP_001132499.1| uncharacterized protein LOC100193958 [Zea mays]
gi|194694542|gb|ACF81355.1| unknown [Zea mays]
Length = 472
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 154 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 213
FI++A ++C LA + G L N +D + ++ I +S + L++ SGN++VQ
Sbjct: 296 FIFEAVAQNCTRLAYQQNGLRLLQNCLDRVSQKQKDYIFTQLSYESLFLAQDSSGNWIVQ 355
Query: 214 HVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQI 271
VL DP I+ I LR HYV L+ K S VV+ CL+ ++ I+ E ++
Sbjct: 356 DVLRRGDPSHIEIIASCLRNHYVTLAKNKYSSNVVEWCLRVFHEEERSVIVYEFISYSHF 415
Query: 272 LQVANDKYGNYVIQTAL 288
+ D++ N+ + TAL
Sbjct: 416 RDLVTDEFANFALSTAL 432
>gi|357492315|ref|XP_003616446.1| Pumilio-like protein [Medicago truncatula]
gi|355517781|gb|AES99404.1| Pumilio-like protein [Medicago truncatula]
Length = 1066
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 154/348 (44%), Gaps = 45/348 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +F + LM+ +G +V KF E
Sbjct: 698 VVEFSADQYGSRFIQQKLETASMEEKTMVFNEIMPKALTLMTDVFGNYVVQKFFEHGTAE 757
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKK------------LIKVVAHLPPLL----Y 117
Q+ + ++T L S+ +G ++K ++ P LL +
Sbjct: 758 QIRELADQLTGH---VLTLSLQMYGCRVIQKQSHYAKGARKYEVVGRPDGFPRLLIFFSF 814
Query: 118 HVMSALKRLF---KFLMMTK------------PGSSVILQCLEPSYNHKNDFIYQAALEH 162
+++ A++ + K M+T+ G+ VI +C+E + FI +
Sbjct: 815 YIVQAIEVVNLDQKTKMVTELDGHIMRCVRDQNGNHVIQKCIECVPEDEIKFIVSTFYDQ 874
Query: 163 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAAS-LSRHRSGNYVVQHVLSLEDP 221
+ L+ H GC + ++ + +QI+ + S L++ + GNYVVQHVL P
Sbjct: 875 VVTLSTHPYGCRVIQRVLEYCHDPKTQQIMMDEILQCVSMLAQDQYGNYVVQHVLEHGKP 934
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNS---DQILQV-A 275
AI G V +S K S V++KCL + ++ E++ S ++ LQV
Sbjct: 935 HERTAIIKEFTGQIVQMSQQKFASNVIEKCLSFGTPTERQVLVNEMIGSTDDNEPLQVMM 994
Query: 276 NDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D++ NYV+Q L ET +L + ++ +++ HL AL+ YG ++
Sbjct: 995 KDQFANYVVQKVL-ETCDDQQLEL---ILNRIKVHLNALKKYTYGKHI 1038
>gi|341874392|gb|EGT30327.1| CBN-PUF-9 protein [Caenorhabditis brenneri]
Length = 688
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 150/328 (45%), Gaps = 25/328 (7%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+++ A+DQ GS+++Q+ L SR +F V ELM+ +G +V KF E N
Sbjct: 334 NNVIEFAKDQHGSRFIQQKLERASSRDKAAIFTPVLEHAEELMTDVFGNYVIQKFFEYGN 393
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q ++ T + + LA + +G ++K ++ V + ++ ++ +
Sbjct: 394 NDQRNQLVA--TIRGNVMKLA-LQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCV 448
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQA----ALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI + +E + FI A ++ L+ H GC + ++ +
Sbjct: 449 KDQNGNHVIQKVIERVEPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNDEQ 508
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCG 244
++ +L ++++ L + GNYV+QHV+ S +D I + + + + K
Sbjct: 509 KQPVLDALNLHLKQLVLDQYGNYVIQHVIEHGSAKDKEQI--VKDVINDDLLKFAQHKFA 566
Query: 245 SFVVQKCLKY--QNAVHYIIEELLN-----SDQILQVANDKYGNYVIQTALAETMRQDRL 297
S V++KCL + Q + II+++ S +L + D + NYV+Q L Q R
Sbjct: 567 SNVIEKCLSFGSQEDRNLIIDKVCGDPNDASPPLLLMMKDPFANYVVQKMLDVADPQHR- 625
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNVYK 325
+++ ++ H+A LR +G ++ +
Sbjct: 626 ---KKITLTIKPHIATLRKYNFGKHILR 650
>gi|167382459|ref|XP_001736113.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165901552|gb|EDR27630.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 435
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 131/286 (45%), Gaps = 27/286 (9%)
Query: 23 GSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 82
G LQ+ L + +F + EL++ G+++ K +E +E
Sbjct: 135 GCSLLQKLLDGASKESVFLIFKEIEDSLEELITHPNGQYILPKIVEFGSEE--------- 185
Query: 83 TFQDQLFLLASVD-------KFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
+D +F + S + +FG +V+K + + + S + R +++ P
Sbjct: 186 -IKDNVFGVVSENLVKYCCHQFGGYTVQK---IAPFMRERHIQIWSPILRNNIAILIIDP 241
Query: 136 GSSVILQCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 194
++ ++Q L +N KN DF Y+ + + ++ + GC L + +DN + I
Sbjct: 242 HANYVIQTLLKIFNEKNSDFFYRGLKDCVVDISKTKIGCSVLTHAMDNSTNQQINSIKPQ 301
Query: 195 ISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK- 253
+ N L + + GN+++QH++ DP +I I ++ + V S K S VV+KCLK
Sbjct: 302 LLSNCCDLIQDQYGNFIIQHLME-NDPTIISDIIHKIKDNIVFYSKQKFSSNVVEKCLKC 360
Query: 254 -YQNAVHYIIEELLNSDQILQVANDKYGNYVIQT---ALAETMRQD 295
+N +++ L + ++ + D+YGN+VIQ L E R++
Sbjct: 361 STENVRQPLLDVLSQPESLVALVEDQYGNFVIQAFLDVLPENRREE 406
>gi|426334843|ref|XP_004028946.1| PREDICTED: pumilio homolog 2 isoform 2 [Gorilla gorilla gorilla]
Length = 986
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 653 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 712
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 713 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 766
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 767 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 821
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 822 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 881
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 882 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 935
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 936 QRKIIMHKIRPHITTLRKYTYGKHI 960
>gi|358414517|ref|XP_003582857.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070234|ref|XP_003586698.1| PREDICTED: pumilio homolog 2 isoform 2 [Bos taurus]
Length = 1063
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 843
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 844 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 898
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 899 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 958
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 959 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1012
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H++ LR YG ++
Sbjct: 1013 QRKIIMHKIRPHISTLRKYTYGKHI 1037
>gi|402890199|ref|XP_003908378.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2 [Papio anubis]
Length = 984
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 651 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 710
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 711 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 764
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 765 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 819
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 820 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 879
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 880 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 933
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 934 QRKIIMHKIRPHITTLRKYTYGKHI 958
>gi|326916555|ref|XP_003204572.1| PREDICTED: pumilio homolog 2-like [Meleagris gallopavo]
Length = 1061
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 787
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ ++ P ++ L +
Sbjct: 788 QKLALATRIRGH---VLPLALQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 842
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 843 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 902
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 903 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVT 962
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 963 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1016
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1017 HKIRPHITTLRKYTYGKHI 1035
>gi|291399425|ref|XP_002716109.1| PREDICTED: pumilio 1-like isoform 2 [Oryctolagus cuniculus]
Length = 1092
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 143/324 (44%), Gaps = 28/324 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 757 IMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 816
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + P V++ + R ++
Sbjct: 817 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFI----PADQQVINEMVRELDGHVL 868
Query: 133 T----KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 869 KCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQT 928
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV
Sbjct: 929 LPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVV 988
Query: 249 QKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQ 301
+KC+ + + +I+E+ + A D+Y NYV+Q + D Q
Sbjct: 989 EKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQ 1042
Query: 302 RLVT--KLQQHLAALRVMKYGSNV 323
R + K++ H+A LR YG ++
Sbjct: 1043 RKIVMHKIRPHIATLRKYTYGKHI 1066
>gi|354479902|ref|XP_003502148.1| PREDICTED: pumilio homolog 2 isoform 1 [Cricetulus griseus]
Length = 1065
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 845
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 846 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 900
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 901 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 960
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 961 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1014
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1015 QRKIIMHKIRPHITTLRKYTYGKHI 1039
>gi|350582680|ref|XP_003125422.3| PREDICTED: pumilio homolog 2 isoform 1 [Sus scrofa]
Length = 1060
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 727 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 786
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 787 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 840
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 841 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 895
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 896 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 955
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 956 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1009
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1010 QRKIIMHKIRPHITTLRKYTYGKHI 1034
>gi|296224411|ref|XP_002758049.1| PREDICTED: pumilio homolog 2 isoform 2 [Callithrix jacchus]
Length = 1064
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 844
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 845 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 899
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 900 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 959
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 960 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1013
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1014 QRKIIMHKIRPHITTLRKYTYGKHI 1038
>gi|308510969|ref|XP_003117667.1| CRE-PUF-9 protein [Caenorhabditis remanei]
gi|308238313|gb|EFO82265.1| CRE-PUF-9 protein [Caenorhabditis remanei]
Length = 714
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 148/326 (45%), Gaps = 21/326 (6%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+++ A+DQ GS+++Q+ L R +F V ELM+ +G +V KF E N
Sbjct: 360 NNVIEFAKDQHGSRFIQQKLERASIRDKAVIFTPVLEHAEELMTDVFGNYVIQKFFEFGN 419
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q L++ T + + LA + +G ++K ++ V + ++ ++ +
Sbjct: 420 NEQRNLLVG--TIRGNVMKLA-LQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCV 474
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQA----ALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI + +E + FI A ++ L+ H GC + ++ +
Sbjct: 475 KDQNGNHVIQKVIERVEPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNDEQ 534
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAIC-FALRGHYVDLSLTKCGSF 246
++ +L ++++ L + GNYV+QHV+ P + I + + + K S
Sbjct: 535 KQPVLDALNLHLKQLVLDQYGNYVIQHVIEHGSPKDKEQIVQDVINDDLLKYAQHKFASN 594
Query: 247 VVQKCLKYQNAV--HYIIEELLN-----SDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
V++KCL + + II+++ S +LQ+ D + NYV+Q L Q R
Sbjct: 595 VIEKCLTFGGDAERNIIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHR--- 651
Query: 300 HQRLVTKLQQHLAALRVMKYGSNVYK 325
+++ ++ H+A LR +G ++ +
Sbjct: 652 -KKITLTIKPHIATLRKYNFGKHILR 676
>gi|307102758|gb|EFN51026.1| hypothetical protein CHLNCDRAFT_28462 [Chlorella variabilis]
Length = 393
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 145/330 (43%), Gaps = 28/330 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
L+ +DQ GS+ +Q+ L + L LF V LM +G +V +F+E
Sbjct: 17 LYPFCRDQHGSRLVQQQLETAAPEELTALFGEVRHKLLPLMVDVFGNYVVQRFLERGGAE 76
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
A + I + L S+ +G V+K ++V+ +S + L + +
Sbjct: 77 VQAAVAEAIRGK---ALPLSLQMYGCRVVQKALEVLPQ-----QQRVSICRELTEHTLRC 128
Query: 132 -MTKPGSSVI---LQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK-GS 186
+ G+ V+ ++C++PS ++ + + + L+ H GC + ++
Sbjct: 129 VRDQNGNHVVQKCIECVQPSGPARD--MIEIIVNKGQALSTHTFGCRLVQRVLEFCSIAE 186
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
R++++ + + LS + GNYVVQH+++ ++I + + L+ K S
Sbjct: 187 LREKVISDVLDSTLQLSHDQYGNYVVQHLVAKGPGPARESIVAKVAPQVMTLAQHKYASN 246
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+ CLK+ H I+++++ A D+YGNYV+Q AL R +
Sbjct: 247 VVEACLKHSGQAHRDAIVDQMIRESGARPAALTALMRDQYGNYVVQRALEVATPPQRAA- 305
Query: 300 HQRLVTKLQQHLAALRVMKYGSNVYKWTTA 329
L+ ++ HL AL+ YG ++ A
Sbjct: 306 ---LLAAIKPHLDALKKYTYGKHIVTKAEA 332
>gi|73979795|ref|XP_849088.1| PREDICTED: pumilio homolog 2 isoform 1 [Canis lupus familiaris]
Length = 1063
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 843
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 844 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 898
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 899 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 958
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 959 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1012
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1013 QRKIIMHKIRPHITTLRKYTYGKHI 1037
>gi|425773915|gb|EKV12240.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
PHI26]
gi|425782417|gb|EKV20327.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
Pd1]
Length = 904
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 150/327 (45%), Gaps = 31/327 (9%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S +++F + +LM+ +G +V K E
Sbjct: 491 NH-VVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 549
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALK 124
N++Q ++ ++ L S +G V+K ++ + A + L HV+ ++
Sbjct: 550 NQTQKKILANQMRGH---VLALSTQMYGCRVVQKALEHILTDQQAAMVKELENHVLKCVR 606
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ VI + +E + FI A LA H GC + +++ +
Sbjct: 607 --------DQNGNHVIQKAIERVPSQHVQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCE 658
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
R+ IL + ++L + GNYV+QHV+ D + + G + S K
Sbjct: 659 EVDRQSILAELHACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFA 718
Query: 245 SFVVQKCLKYQNAVH---YIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDR 296
S VV+K +++ A H +II L +++ +L + D+YGNYVIQ L + +R
Sbjct: 719 SNVVEKSIEF-GAEHERIHIISTLTSANDRGESPLLGLMRDQYGNYVIQKVLGQLKHVER 777
Query: 297 LSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ +++ L L+ YG +
Sbjct: 778 ----EALIDQIKPLLGQLKKFSYGKQI 800
>gi|410955766|ref|XP_003984521.1| PREDICTED: pumilio homolog 2 isoform 2 [Felis catus]
Length = 1063
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 843
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 844 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 898
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 899 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 958
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 959 VEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMI------DMAEPA 1012
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1013 QRKIIMHKIRPHITTLRKYTYGKHI 1037
>gi|426223186|ref|XP_004005758.1| PREDICTED: pumilio homolog 2 isoform 1 [Ovis aries]
Length = 1063
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 843
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 844 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 898
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 899 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 958
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 959 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1012
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1013 QRKIIMHKIRPHITTLRKYTYGKHI 1037
>gi|348571014|ref|XP_003471291.1| PREDICTED: pumilio homolog 1-like isoform 2 [Cavia porcellus]
Length = 1092
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 757 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 816
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 817 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 872
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 873 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 932
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 933 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 992
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 993 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1046
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1047 MHKIRPHIATLRKYTYGKHI 1066
>gi|301758394|ref|XP_002915042.1| PREDICTED: pumilio homolog 2-like [Ailuropoda melanoleuca]
Length = 1064
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 844
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 845 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 899
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 900 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 959
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 960 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1013
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1014 QRKIIMHKIRPHITTLRKYTYGKHI 1038
>gi|11991652|gb|AAG42319.1|AF321909_1 pumilio 1 [Mus musculus]
Length = 1189
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 913
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 914 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 969
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 970 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1029
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1030 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1089
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1090 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1143
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1144 MHKIRPHIATLRKYTYGKHI 1163
>gi|383417009|gb|AFH31718.1| pumilio homolog 2 [Macaca mulatta]
Length = 1059
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 726 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 785
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 786 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 839
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 840 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 894
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 895 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 954
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 955 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1008
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1009 QRKIIMHKIRPHITTLRKYTYGKHI 1033
>gi|344252117|gb|EGW08221.1| Pumilio-like 2 [Cricetulus griseus]
Length = 1064
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 791 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 844
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 845 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 899
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 900 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 959
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 960 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1013
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1014 QRKIIMHKIRPHITTLRKYTYGKHI 1038
>gi|403288165|ref|XP_003935283.1| PREDICTED: pumilio homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1066
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 733 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 792
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 793 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 846
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 847 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 901
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 902 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 961
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 962 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1015
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1016 QRKIIMHKIRPHITTLRKYTYGKHI 1040
>gi|332253817|ref|XP_003276028.1| PREDICTED: pumilio homolog 2 isoform 1 [Nomascus leucogenys]
Length = 1065
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 792 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 845
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 846 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 900
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 901 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 960
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 961 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1014
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1015 QRKIIMHKIRPHITTLRKYTYGKHI 1039
>gi|383417007|gb|AFH31717.1| pumilio homolog 2 [Macaca mulatta]
Length = 1060
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 727 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 786
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 787 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 840
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 841 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 895
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 896 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 955
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 956 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1009
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1010 QRKIIMHKIRPHITTLRKYTYGKHI 1034
>gi|149727740|ref|XP_001503365.1| PREDICTED: pumilio homolog 2 [Equus caballus]
Length = 1063
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 730 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 789
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 790 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 843
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 844 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 898
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 899 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 958
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 959 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1012
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1013 QRKIIMHKIRPHITTLRKYTYGKHI 1037
>gi|74206258|dbj|BAE24888.1| unnamed protein product [Mus musculus]
Length = 1189
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 913
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 914 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 969
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 970 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1029
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1030 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1089
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1090 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1143
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1144 MHKIRPHIATLRKYTYGKHI 1163
>gi|227430380|ref|NP_109647.2| pumilio homolog 1 isoform 1 [Mus musculus]
gi|41688656|sp|Q80U78.2|PUM1_MOUSE RecName: Full=Pumilio homolog 1
gi|148698187|gb|EDL30134.1| pumilio 1 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1189
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 913
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 914 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 969
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 970 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1029
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1030 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1089
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1090 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1143
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1144 MHKIRPHIATLRKYTYGKHI 1163
>gi|167392498|ref|XP_001740184.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165895862|gb|EDR23451.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 437
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 20/292 (6%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
N+ L L +DQ+GS+ +Q+ +D++F ++ + ELM +G +V K +E
Sbjct: 118 NYSLPELCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLLEHG 177
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
+ + L+ K+ Q + L S+ +G ++K+++V++ + + + +K
Sbjct: 178 TKKHVHLLFEKL--QGNVVKL-SLHMYGCRVIQKILEVLSSEEVRI--ISAEIKSNVSTF 232
Query: 131 MMTKPGSSVILQCL----EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ + G+ VI + + E N D IY A+E+ + H GC + I+ +
Sbjct: 233 IEDQNGNHVIQKFIDFASEIDLNFMIDEIYTKAVEY----SKHPYGCRVIQRLIEKNSQN 288
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
K++ + LS ++ GNYV+QH++ I ++G + S+ K S
Sbjct: 289 CVKRVTDKLVEYVWELSINQYGNYVIQHLIQYGTNEQRIKIVNNIKGKLYEYSMKKYSSN 348
Query: 247 VVQKCLKYQNAVHYII--EELLNSD----QILQVANDKYGNYVIQTALAETM 292
VV+KC++ + II EL NS+ QI ++ D Y NYVIQ L E M
Sbjct: 349 VVEKCIRCCESREQIILVNELCNSNVTNKQINEMICDPYANYVIQ-RLIEMM 399
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM+ G+ VI + LE +++ + + L+ H GC + ++ + +
Sbjct: 160 LMIDLFGNYVIQKLLEHGTKKHVHLLFEKLQGNVVKLSLHMYGCRVIQKILEVLSSEEVR 219
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
I I N ++ ++GN+V+Q + ++ + + V+ S G V+Q
Sbjct: 220 IISAEIKSNVSTFIEDQNGNHVIQKFIDFASEIDLNFMIDEIYTKAVEYSKHPYGCRVIQ 279
Query: 250 KCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+ ++ QN V + ++L+ + + +++ ++YGNYVIQ + + R+ ++V +
Sbjct: 280 RLIEKNSQNCVKRVTDKLV--EYVWELSINQYGNYVIQHLIQYGTNEQRI----KIVNNI 333
Query: 308 QQHLAALRVMKYGSNV 323
+ L + KY SNV
Sbjct: 334 KGKLYEYSMKKYSSNV 349
>gi|380811084|gb|AFE77417.1| pumilio homolog 2 [Macaca mulatta]
gi|383417013|gb|AFH31720.1| pumilio homolog 2 [Macaca mulatta]
gi|384946088|gb|AFI36649.1| pumilio homolog 2 [Macaca mulatta]
Length = 1065
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 845
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 846 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 900
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 901 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 960
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 961 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1014
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1015 QRKIIMHKIRPHITTLRKYTYGKHI 1039
>gi|114576339|ref|XP_001140678.1| PREDICTED: pumilio homolog 2 isoform 10 [Pan troglodytes]
gi|397513515|ref|XP_003827058.1| PREDICTED: pumilio homolog 2 isoform 1 [Pan paniscus]
gi|426334841|ref|XP_004028945.1| PREDICTED: pumilio homolog 2 isoform 1 [Gorilla gorilla gorilla]
gi|410258976|gb|JAA17454.1| pumilio homolog 2 [Pan troglodytes]
gi|410298912|gb|JAA28056.1| pumilio homolog 2 [Pan troglodytes]
gi|410335699|gb|JAA36796.1| pumilio homolog 2 [Pan troglodytes]
Length = 1065
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 845
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 846 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 900
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 901 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 960
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 961 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1014
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1015 QRKIIMHKIRPHITTLRKYTYGKHI 1039
>gi|227430384|ref|NP_001153076.1| pumilio homolog 1 isoform 3 [Mus musculus]
gi|29165749|gb|AAH48174.1| Pumilio 1 (Drosophila) [Mus musculus]
gi|74208613|dbj|BAE37564.1| unnamed protein product [Mus musculus]
Length = 1188
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 912
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 913 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 968
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 969 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1028
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1029 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1088
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1089 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1142
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1143 MHKIRPHIATLRKYTYGKHI 1162
>gi|395526796|ref|XP_003765542.1| PREDICTED: pumilio homolog 1 isoform 3 [Sarcophilus harrisii]
Length = 946
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 145/329 (44%), Gaps = 40/329 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 613 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 672
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---------LLYHVMSAL 123
+LAL + + LA + +G ++K ++ + PP L HV+ +
Sbjct: 673 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCV 725
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K + G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 726 K--------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC 777
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K
Sbjct: 778 LPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 837
Query: 244 GSFVVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQ 294
S VV+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q
Sbjct: 838 ASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-Q 896
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ +H K++ H+A LR YG ++
Sbjct: 897 RKIVMH-----KIRPHIATLRKYTYGKHI 920
>gi|13491168|ref|NP_056132.1| pumilio homolog 2 [Homo sapiens]
gi|11139704|gb|AAG31806.1|AF315591_1 Pumilio 2 [Homo sapiens]
gi|20521854|dbj|BAA19665.3| KIAA0235 protein [Homo sapiens]
gi|62822478|gb|AAY15026.1| unknown [Homo sapiens]
gi|85566710|gb|AAI12047.1| Pumilio homolog 2 (Drosophila) [Homo sapiens]
gi|85567007|gb|AAI12049.1| Pumilio homolog 2 [Homo sapiens]
gi|119621226|gb|EAX00821.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|119621228|gb|EAX00823.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|168267226|dbj|BAG09669.1| pumilio homolog 2 [synthetic construct]
gi|193787566|dbj|BAG52772.1| unnamed protein product [Homo sapiens]
Length = 1064
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 791 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 844
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 845 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 899
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 900 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 959
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 960 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1013
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1014 QRKIIMHKIRPHITTLRKYTYGKHI 1038
>gi|157822487|ref|NP_001102154.1| pumilio homolog 1 [Rattus norvegicus]
gi|149024100|gb|EDL80597.1| pumilio 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 1189
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 913
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 914 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 969
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 970 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1029
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1030 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1089
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1090 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1143
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1144 MHKIRPHIATLRKYTYGKHI 1163
>gi|320166165|gb|EFW43064.1| pumilio [Capsaspora owczarzaki ATCC 30864]
Length = 1003
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+ +Q+ L + R + +F + LM+ +G +V K E +
Sbjct: 539 VVEFASDQHGSRCIQQRLETATEREKNLVFDEILPHALHLMTDVFGNYVIQKLFEHGTAA 598
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
+ ++ + L S+ +G ++K ++ + P ++ L+ +
Sbjct: 599 HRLELARRL---EGHILRLSLQMYGCRVIQKAVESIPE--PQQVALVRELEGSVIMCVKD 653
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E F+ + L+ H GC + +++ ++ +L
Sbjct: 654 QNGNHVVQKCIEQVPAMHLQFVVDSFRGLVPSLSTHPYGCRVIQRILEHCTPTQVMSMLQ 713
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICF-ALRGHYVDLSLTKCGSFVVQKCL 252
+ N + L + + GNYV+QHVL P AI A+RG V LS K S VV+KC+
Sbjct: 714 EVLGNCSRLIQDQYGNYVIQHVLE-HGPQEAKAIVLDAMRGRIVPLSQHKFASNVVEKCI 772
Query: 253 KYQ---NAVHYIIEELLNSDQ------ILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
+ V I E L+ SD +L + D + NYV+Q L R +L
Sbjct: 773 VHSADLERVALINEILVQSDPGSPTSALLAMMRDPFANYVVQKMLDVACEDQR----NQL 828
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+ +++ ++ +LR YG ++
Sbjct: 829 IARIRPNILSLRKYTYGKHI 848
>gi|269860161|ref|XP_002649803.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
gi|220066744|gb|EED44216.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
Length = 509
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 141/318 (44%), Gaps = 25/318 (7%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
F + QDQEGS+++Q L S + + + F + F +L +G +V K I +
Sbjct: 197 FKVCQDQEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKE 256
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK 134
++ + F ++LL S +G ++KLI + + ++S L+ L+ +
Sbjct: 257 YDILCKR--FSGSIYLL-STHIYGCRVIQKLIDFITDIT----FIISELQDHILELIASP 309
Query: 135 PGSSVILQCLEPS---YNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +C++ S + I + C+ L+ GC L + + ++
Sbjct: 310 NGNHVIQKCIDRSIIENKIFINNIINEFEKDCISLSQQRYGCRVLQRLFEISAPEKVDRL 369
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFA-LRGHYVDLSLTKCGSFVVQK 250
L +I N L R GNYV+QH+ ++ + I F + + V+LS K S V++K
Sbjct: 370 LGIIVDNIQELINDRYGNYVIQHL--IQSNYKQKEIIFKYIISNAVELSRYKFSSNVIEK 427
Query: 251 CLKYQNAVHYIIEELL---------NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
C+ NA +E+ L N + + D Y NYV+Q +T+ D +
Sbjct: 428 CV--VNASKRELEQFLESFAQLAENNKPALFYMCTDMYANYVVQ-KFFDTVDDDLKMKMK 484
Query: 302 RLVTKLQQHLAALRVMKY 319
++ K + + A+ K+
Sbjct: 485 AIIGKYLKDIKAIPFTKH 502
>gi|350582684|ref|XP_003481332.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 1004
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 671 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 730
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 731 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 784
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 785 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 839
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 840 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 899
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 900 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 953
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 954 QRKIIMHKIRPHITTLRKYTYGKHI 978
>gi|334329173|ref|XP_003341194.1| PREDICTED: pumilio homolog 1 isoform 3 [Monodelphis domestica]
Length = 946
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 145/329 (44%), Gaps = 40/329 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 613 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 672
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---------LLYHVMSAL 123
+LAL + + LA + +G ++K ++ + PP L HV+ +
Sbjct: 673 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCV 725
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K + G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 726 K--------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC 777
Query: 184 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKC 243
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K
Sbjct: 778 LPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 837
Query: 244 GSFVVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQ 294
S VV+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q
Sbjct: 838 ASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-Q 896
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ +H K++ H+A LR YG ++
Sbjct: 897 RKIVMH-----KIRPHIATLRKYTYGKHI 920
>gi|74208592|dbj|BAE37556.1| unnamed protein product [Mus musculus]
Length = 980
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 647 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 706
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 707 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 760
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 761 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 815
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 816 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 875
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 876 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 929
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 930 QRKIIMHKIRPHITTLRKYTYGKHI 954
>gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus]
Length = 969
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 636 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 695
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 696 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 749
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 750 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 804
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 805 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 864
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 865 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 918
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 919 QRKIIMHKIRPHITTLRKYTYGKHI 943
>gi|227430388|ref|NP_001153078.1| pumilio homolog 1 isoform 5 [Mus musculus]
Length = 944
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 611 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 670
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 671 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 724
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 725 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 778
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 779 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 838
Query: 247 VVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 839 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 892
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 893 GQRKIVMHKIRPHIATLRKYTYGKHI 918
>gi|237649087|ref|NP_001153694.1| pumilio homolog 2 isoform 3 [Mus musculus]
gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus]
Length = 985
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 652 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 711
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 712 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 765
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 766 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 820
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 821 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 880
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 881 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 934
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 935 QRKIIMHKIRPHITTLRKYTYGKHI 959
>gi|297668109|ref|XP_002812297.1| PREDICTED: pumilio homolog 2 isoform 2 [Pongo abelii]
Length = 1065
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 732 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 791
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ ++ + L HV+ +K
Sbjct: 792 QKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 845
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 846 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 900
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 901 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 960
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 961 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1014
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1015 QRKIIMHKIRPHITTLRKYTYGKHI 1039
>gi|70984262|ref|XP_747647.1| mRNA binding protein Pumilio 2 [Aspergillus fumigatus Af293]
gi|66845274|gb|EAL85609.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
Af293]
gi|159122433|gb|EDP47554.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
A1163]
Length = 908
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 23/323 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S +++F + +LM+ +G +V K E
Sbjct: 494 NH-IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 552
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 553 NQSQKKILANQMKGH---VLALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 604
Query: 131 M---MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E + FI A LA H GC + +++ +
Sbjct: 605 LKCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVD 664
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
R+ IL + A L + GNYV+QHV+ + + + + S K S V
Sbjct: 665 RESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNV 724
Query: 248 VQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+K +++ ++ II L ++++ +L + D+YGNYVIQ L + ++R
Sbjct: 725 VEKSIEFGEESQRQQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKGEER---- 780
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ L+ +++ L+ L+ YG +
Sbjct: 781 EGLIDQIRPLLSQLKKFSYGKQI 803
>gi|148698188|gb|EDL30135.1| pumilio 1 (Drosophila), isoform CRA_b [Mus musculus]
Length = 1212
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 877 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 936
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 937 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 992
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 993 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1052
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1053 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1112
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1113 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1166
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1167 MHKIRPHIATLRKYTYGKHI 1186
>gi|401886820|gb|EJT50837.1| RNA binding protein Pumilio [Trichosporon asahii var. asahii CBS
2479]
Length = 677
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 34/297 (11%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
A DQ GS+++Q L + K+F + F LM+ +G +V K E + +Q A
Sbjct: 297 FASDQHGSRFIQNKLETASPEERQKVFEEILPNAFSLMTDVFGNYVIQKLFEHGDAAQKA 356
Query: 77 LIILKITFQDQLFLLASVDKFG---------SSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
+I K+ Q LFL S +G + + K+VA L H++ +K
Sbjct: 357 ALIKKMEGQ-ALFL--SNHMYGCRVMQTALEHARTEDRAKLVAE---LDGHIIECVKSSN 410
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
++ + L L+P + FI H L+ H GC L + + +
Sbjct: 411 ANHVIQR------LITLDPPRGFMDAFI-----GHVRELSTHPFGCRVLQKSFEVLPPEK 459
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLED--PFLIDAICFALRGHYVDLSLTKCGS 245
+ +L + + L ++ GNYVVQ V++ + D ++ DL K S
Sbjct: 460 IRPLLDEMHTCSHELMINQFGNYVVQSVITEGEGRKHDRDLAVAEIKTRIFDLCRHKFAS 519
Query: 246 FVVQKCLKYQNAV--HYIIEELLNSD----QILQVANDKYGNYVIQTALAETMRQDR 296
VV+K LK+ N +I E++ D +I + D+YGN+ +QTALAE + R
Sbjct: 520 NVVEKALKHANPADKRELISEMIGDDSGENRIQTLLRDQYGNFPVQTALAEAEKDQR 576
>gi|354472363|ref|XP_003498409.1| PREDICTED: pumilio homolog 1 isoform 3 [Cricetulus griseus]
Length = 943
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 610 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 669
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 670 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 723
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 724 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 777
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 778 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 837
Query: 247 VVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 838 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 891
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 892 GQRKIVMHKIRPHIATLRKYTYGKHI 917
>gi|268562677|ref|XP_002646736.1| Hypothetical protein CBG13130 [Caenorhabditis briggsae]
Length = 514
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 145/324 (44%), Gaps = 27/324 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
L A+DQ GS+++Q+ L D D +F V EL+ +G +V KF E E
Sbjct: 183 LLKFAKDQVGSRFIQQKLEFCDINEKDAIFDEVVDNAAELVDDIFGNYVVQKFFEYGEEK 242
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
++ + D++ A + ++K ++ V PL ++S ++ + M
Sbjct: 243 HWTRLVDAVV--DRVPEYA-FQMYACRVLQKALEKVNE--PLQIKILSQIRHVIHRCMKD 297
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALE---HCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + +E FI +E + ++ GC + +++ S+ +
Sbjct: 298 QNGNHVIQKAIEKVSPQYIQFIVNTLMENPDNIFDMSVDPYGCRVVQRCLEHCIASQTRP 357
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
I+ I ++ ++ GNYVVQHV+ + D L I + + D + K S V
Sbjct: 358 IIERIHERFDDIANNQYGNYVVQHVILHGTEADRLL---IVTRVSENLFDFASHKYSSNV 414
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQ------ILQVANDKYGNYVIQTALAETMRQDRLSV 299
++KCL+ + ++H+ II S ++Q+ D+Y NYV+Q + + R
Sbjct: 415 IEKCLE-RGSIHHKNIIVRAACSQPDGTMPIVVQMMKDQYANYVVQKMFEQVTPEQR--- 470
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+ L+ ++ H+ LR +G ++
Sbjct: 471 -RELILTVRSHIPILRQFAHGKHI 493
>gi|367028016|ref|XP_003663292.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
gi|347010561|gb|AEO58047.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
Length = 891
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 20/310 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ+ S+++Q+ L + +S D++F + +LM +G +V K E +
Sbjct: 498 IVEFSGDQQASRFIQQKLETANSDERDQVFAEIEKNAIQLMKDVFGNYVMQKLFEYGD-- 555
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLM 131
Q+ +L + ++ L S+ + V+K ++ +V L+ + S L ++ K
Sbjct: 556 QVQKKVLASAMKGKVVDL-SMQPYACRVVQKALEHVLVEQQTELVKELESDLLKVAK--- 611
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
+ G+ VI Q + DFI LA H+ GC + +++ + + +
Sbjct: 612 -DQHGNHVIQQAIVLVPREHIDFIMTGFKGRVYELASHQFGCRVIQRILEHGTEADKAAL 670
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + +A SL GNYV+QHVL P + + + LS K S VV+KC
Sbjct: 671 MVELHNSAQSLVTDMYGNYVIQHVLEKGRPEDRAKMIGVVTPQLLMLSRHKNASNVVEKC 730
Query: 252 L-----KYQNAVH-YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + Q A+ ++ E NS + Q+ D++GNYVIQ + QDR+ LV
Sbjct: 731 IMLGTPEEQRAIRDKLMGEEPNS-PLFQLMKDQFGNYVIQKLVKALQGQDRMV----LVN 785
Query: 306 KLQQHLAALR 315
KL HL +LR
Sbjct: 786 KLASHLQSLR 795
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + +Q + ++ R Q+ I NA L + GNYV+Q + D
Sbjct: 497 HIVEFSGDQQASRFIQQKLETANSDERDQVFAEIEKNAIQLMKDVFGNYVMQKLFEYGDQ 556
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEEL------LNSDQILQVA 275
+ A++G VDLS+ VVQK L+ H ++E+ L SD +L+VA
Sbjct: 557 VQKKVLASAMKGKVVDLSMQPYACRVVQKALE-----HVLVEQQTELVKELESD-LLKVA 610
Query: 276 NDKYGNYVIQTALAETMRQ 294
D++GN+VIQ A+ R+
Sbjct: 611 KDQHGNHVIQQAIVLVPRE 629
>gi|148229513|ref|NP_001081119.1| pumilio homolog 1 [Xenopus laevis]
gi|51513460|gb|AAH80379.1| Pum1-A protein [Xenopus laevis]
Length = 1190
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 24/322 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 855 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 914
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + +I L ++ +G ++K ++ + PP + ++ L ++
Sbjct: 915 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLKC 968
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 969 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLP 1028
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 1029 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 1088
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQ 301
C+ + + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1089 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH- 1146
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1147 ----KIRPHIATLRKYTYGKHI 1164
>gi|392566810|gb|EIW59985.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 378
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 145/326 (44%), Gaps = 22/326 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+ + DQ GS+++Q+ L S S ++ +F +V + +LM +G +V K E
Sbjct: 26 IVEFSGDQHGSRFIQQKLESATSEEMEIIFDEIVPQYAIQLMQDVFGNYVVQKMFEYGTS 85
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+Q A ++ T + Q+ L S+ +G V+K I+ + LP + L +
Sbjct: 86 AQKARLV--ATMEGQILGL-SLQMYGCRVVQKAIEHI--LPEQQVLFVQELGPNVLRCVK 140
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + +E + F+ A +Y L+ H GC L + M + + +
Sbjct: 141 DANGNHVIQKLIEHVAPDRLAFV--TAFRGSVYDLSTHPYGCRVLQRCFEYMPEDQTRPL 198
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
L + +L + GNYVVQ VL P I L G +++ K S V +K
Sbjct: 199 LDELHKYVPNLMIDQFGNYVVQFVLEHGRPQDRAMIISKLTGQMYNMAKHKFASNVCEKA 258
Query: 252 L--KYQNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
L + +I+E++ Q I+ + D +GNYV+Q AL + + L+
Sbjct: 259 LVCADPESRRQLIDEIMTPKQDGLSPIMGLMKDSFGNYVLQRALTVADADQK----ELLI 314
Query: 305 TKLQQHLAALRVMKYGSNVYKWTTAS 330
+K++ HL +R +Y S K +AS
Sbjct: 315 SKVRPHLVNMR--RYSSAYSKHLSAS 338
>gi|327261367|ref|XP_003215502.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Anolis
carolinensis]
Length = 1180
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 140/319 (43%), Gaps = 20/319 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ ++DQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 847 IVEFSRDQHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSID 906
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I + + LA + +G ++K ++ ++ P ++ L +
Sbjct: 907 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESIS--PDQQNEMVKELDGHVLKCVKD 961
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 962 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 1021
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG + LS K S VV+KC+
Sbjct: 1022 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVTEIRGKVLTLSQHKFASNVVEKCVT 1081
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQR--LV 304
+ + +I+E+ + A D+Y NYV+Q + D QR ++
Sbjct: 1082 HASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIM 1135
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+ LR YG ++
Sbjct: 1136 HKIRPHITTLRKYTYGKHI 1154
>gi|28804566|dbj|BAC57980.1| Pumilio [Xenopus laevis]
Length = 1185
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 24/322 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 850 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 909
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + +I L ++ +G ++K ++ + PP + ++ L ++
Sbjct: 910 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLKC 963
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 964 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLP 1023
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 1024 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 1083
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQ 301
C+ + + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1084 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH- 1141
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1142 ----KIRPHIATLRKYTYGKHI 1159
>gi|190348753|gb|EDK41273.2| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 151/316 (47%), Gaps = 29/316 (9%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q+ L + + + +F + ++ELM+ +G +V K+ E N +Q
Sbjct: 426 FTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKYFEYGNNTQ-K 484
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---T 133
++LK ++ L S+ +G V++ ++ V L +S + L +++
Sbjct: 485 QVLLKFMI-GHIYEL-SLQMYGCRVVQRALEAVD-----LKGQISIIDELRDHILVCAKD 537
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI + +E + FI + + +L+ H GC + ++ R++++L
Sbjct: 538 QNGNHVIQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLLEYADPKRQQEMLD 597
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
++ L + + GNYV+QH+L +AI + G V+ S K S V++KC+K
Sbjct: 598 ELNRFIFYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNVIEKCIK 657
Query: 254 YQNAVH--YIIEELL--NSDQILQVANDK----------YGNYVIQTALAETMRQDRLSV 299
+ I++E++ N D ++ +D+ Y NYVIQ L E D
Sbjct: 658 FGTVKQKRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQK-LVEGF--DAKGE 714
Query: 300 HQR-LVTKLQQHLAAL 314
+R LV KL+Q+L +
Sbjct: 715 EKRMLVMKLRQYLKQI 730
>gi|28972067|dbj|BAC65487.1| mKIAA0099 protein [Mus musculus]
Length = 1218
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 883 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 942
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 943 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 998
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 999 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1058
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1059 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1118
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1119 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1172
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1173 MHKIRPHIATLRKYTYGKHI 1192
>gi|335892195|pdb|2YJY|A Chain A, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
gi|335892196|pdb|2YJY|B Chain B, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
Length = 350
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 139/325 (42%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 27 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 86
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 87 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 140
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 141 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 195
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + G+YV++HVL P I +RG+ + LS K S V
Sbjct: 196 TLPILEELHQHTEQLVQDQYGSYVIRHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 255
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + + + D+Y NYV+Q + D
Sbjct: 256 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 309
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 310 QRKIVMHKIRPHIATLRKYTYGKHI 334
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 12/260 (4%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRF 61
Q +A + SLA G + +Q+ L S +++ + G + + Q G
Sbjct: 87 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNH 146
Query: 62 VFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMS 121
V K IE L II F+ Q+F L S +G ++++++ LP ++
Sbjct: 147 VVQKCIECVQPQSLQFII--DAFKGQVFAL-STHPYGCRVIQRILEHC--LPDQTLPILE 201
Query: 122 ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
L + + L+ + GS VI LE I + L L+ H+ + +
Sbjct: 202 ELHQHTEQLVQDQYGSYVIRHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 261
Query: 182 NMKGSRRKQIL-HLISVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
+ + R ++ + ++N ++ + + NYVVQ ++ + +P + +R H
Sbjct: 262 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPH 321
Query: 235 YVDLSLTKCGSFVVQKCLKY 254
L G ++ K KY
Sbjct: 322 IATLRKYTYGKHILAKLEKY 341
>gi|237649083|ref|NP_001153692.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|237649085|ref|NP_001153693.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|74200874|dbj|BAE24797.1| unnamed protein product [Mus musculus]
Length = 1064
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 731 IVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLD 790
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 791 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 844
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 845 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 899
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 900 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 959
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 960 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1013
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1014 QRKIIMHKIRPHITTLRKYTYGKHI 1038
>gi|346327596|gb|EGX97192.1| Armadillo-type fold domain containing protein [Cordyceps militaris
CM01]
Length = 816
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 130/288 (45%), Gaps = 20/288 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q L S +S D++F + +LM +G +V KF E N+
Sbjct: 438 IVEFSGDQHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVIQKFFEHGNQV 497
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF---- 129
Q ++ K+ + + SV + V+K ++ V L +AL +
Sbjct: 498 QKKILAEKMRGK---VVDLSVQVYACRVVQKALEHV------LVEQQAALTKELDPEILR 548
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
++ + G+ VI + +E DFI A LA H GC + +++ +
Sbjct: 549 VIRDQNGNHVIQKIIELVPRQYIDFIMDAVRGQVTGLASHTYGCRVIQRMLEHGTDIDKL 608
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+I+ + +A L + GNYV QHV+ P D + + + LS K S VV+
Sbjct: 609 EIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVVE 668
Query: 250 KCLKY-----QNAVHYIIEEL-LNSDQILQ-VANDKYGNYVIQTALAE 290
KC+++ ++A+ + + + LQ + D+YGNYVIQ L +
Sbjct: 669 KCIEHGTQQQRSAIRVQLTTVGPDGTSPLQLMMRDQYGNYVIQKLLGQ 716
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 155 IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQH 214
+ Q ALEH L +Q L +D +IL +I R ++GN+V+Q
Sbjct: 522 VVQKALEHVL---VEQQAA--LTKELD-------PEILRVI--------RDQNGNHVIQK 561
Query: 215 VLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLNSDQIL 272
++ L ID I A+RG L+ G V+Q+ L++ + I+ EL S QIL
Sbjct: 562 IIELVPRQYIDFIMDAVRGQVTGLASHTYGCRVIQRMLEHGTDIDKLEIMTELHASAQIL 621
Query: 273 QVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D+YGNYV Q + +DR +L+ + L L K+ SNV
Sbjct: 622 --ITDQYGNYVAQHVIQNGKPEDR----DKLIQLVMSQLLTLSKHKFASNV 666
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + + +++ + ++ I NA L + GNYV+Q +
Sbjct: 437 HIVEFSGDQHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVIQKFFEHGNQ 496
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY----QNAVHYIIEELLNSDQILQVAND 277
+ +RG VDLS+ VVQK L++ Q A + +EL +IL+V D
Sbjct: 497 VQKKILAEKMRGKVVDLSVQVYACRVVQKALEHVLVEQQAA--LTKEL--DPEILRVIRD 552
Query: 278 KYGNYVIQTALAETMRQ 294
+ GN+VIQ + RQ
Sbjct: 553 QNGNHVIQKIIELVPRQ 569
>gi|183234600|ref|XP_651888.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801007|gb|EAL46500.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
Length = 394
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 142/319 (44%), Gaps = 16/319 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
N D L+QDQ GS+ +Q + + + D +F + L + +V K E
Sbjct: 75 NEDYLRLSQDQTGSRTVQHKIETSTTE-RDIIFDSIEKEAVTLSKDVFANYVIQKLFEFG 133
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +I ++T F+ S+ +G V+K I+ V + + + + ++
Sbjct: 134 VFWQKSQLIKRLTGS---FVELSLHMYGCRVVQKAIEFVDDIDKRI--IFNEIEDNIIAC 188
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ VI +C+E D I A L + H GC + ++ + +
Sbjct: 189 IQDQNGNHVIQKCVEKGDLKIIDSIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYP 248
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L I N LS+ + GNYV+Q+++ + P + I AL+G+ LS+ K S V++K
Sbjct: 249 LLEEILPNTLELSKDQYGNYVIQYIVE-KCPSERNKIRKALQGNIALLSMQKYSSNVIEK 307
Query: 251 CLKYQN--AVHYIIEELL----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
C N I++E+ + +L + D+Y NYV+Q + +DR + +V
Sbjct: 308 CFMCANLKGRQEILKEIYGVKKDGAPLLMMMRDQYANYVVQKIIENVSDEDREFMVNNVV 367
Query: 305 TKLQQHLAALRVMKYGSNV 323
+ +LR + Y ++
Sbjct: 368 LP---QINSLRKVPYAKHI 383
>gi|157818169|ref|NP_001100185.1| pumilio homolog 2 [Rattus norvegicus]
gi|149050904|gb|EDM03077.1| pumilio 2 (Drosophila) [Rattus norvegicus]
Length = 1061
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 728 IVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAAYQLMTDVFGNYVIQKFFEFGSLD 787
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 788 QKLALANRI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--- 841
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 842 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 896
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG + LS K S V
Sbjct: 897 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 956
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 957 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1010
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1011 QRKIIMHKIRPHITTLRKYTYGKHI 1035
>gi|71395516|ref|XP_802323.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70861784|gb|EAN80877.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 449
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 14 LFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
++ +A+DQ G ++LQ L S+GD + + V ELM QY F+ K +
Sbjct: 200 VYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMIDQYANFLIQKLFDMM- 258
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q + ++ +A + G+ SV+K+++ +A + + AL + L+
Sbjct: 259 -PQDVRYKVACVAAPKIISIA-LTPHGTFSVQKMVETIASREEMDI-LREALSKDVVRLV 315
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + L+ + +FIY A C+ +A ++QGC L ++ S+R +
Sbjct: 316 KDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATL 375
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
++ I ++ GNYV+Q+VL D D I A H V L + K S V++K
Sbjct: 376 VNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKV 435
Query: 252 LK 253
L+
Sbjct: 436 LR 437
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 159 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLS 217
A + +A G ++ ++ + IL +S + L + GN+V+Q VL
Sbjct: 270 AAPKIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVVRLVKDAHGNHVIQKVLQ 329
Query: 218 LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVH--YIIEELLNSDQILQVA 275
+ I A+ + ++ K G V+Q+CL+Y + ++ ++L LQ+A
Sbjct: 330 RFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRC--CLQIA 387
Query: 276 NDKYGNYVIQTALA--ETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D +GNYV+Q L ++ D +++ HL L + K+ SNV
Sbjct: 388 EDPFGNYVLQYVLESNDSKTTDTIAI------AFLPHLVQLCMNKFSSNV 431
>gi|348571016|ref|XP_003471292.1| PREDICTED: pumilio homolog 1-like isoform 3 [Cavia porcellus]
Length = 944
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 611 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 670
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 671 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 724
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 725 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 778
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 779 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 838
Query: 247 VVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 839 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 892
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 893 GQRKIVMHKIRPHIATLRKYTYGKHI 918
>gi|405118729|gb|AFR93503.1| pumilio 2 [Cryptococcus neoformans var. grubii H99]
Length = 601
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 37/293 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q+ L KLF + ++LM+ +G +V K E ++
Sbjct: 226 IVEFAGDQHGSRFIQQKLEIATPEDRQKLFDEIYPNAYQLMTDVFGNYVTQKMFEHGDQL 285
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLI---------KVVAHLPPLLYHVMSALK 124
Q A + K+ D L S+ +G V+K + K+VA L P H++ +K
Sbjct: 286 QKAALAKKM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEP---HILECVK 339
Query: 125 RLFKFLMMTKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN 182
+ + V+ + + P + + FI H LA H GC L +N
Sbjct: 340 --------SSNANHVVQRMINIGPPQSIPDSFI-----GHVEELAKHPYGCRVLQKTFEN 386
Query: 183 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
+ ++ +L + SL+ + GNYV+Q V+++ + + L+G + K
Sbjct: 387 LDDKMKRSLLDEMHKCVISLTEDQFGNYVIQSVITVGKSEDRNKVVDQLKGRITTFARHK 446
Query: 243 CGSFVVQKCLKYQNAV--HYIIEELL-----NSDQILQVANDKYGNYVIQTAL 288
S VV+K L + + +I+EL+ ++Q+ + D Y N+ +QT +
Sbjct: 447 FASNVVEKALIHADPADRRALIDELIGMQPDGTNQVGMLLRDAYANFPLQTGM 499
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 163 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF 222
L L+ GC + +D++ +R +I+ + + + + N+VVQ ++++ P
Sbjct: 298 VLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANHVVQRMINIGPP- 356
Query: 223 LIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQ--ILQVANDKYG 280
+I + GH +L+ G V+QK ++N + LL+ ++ + D++G
Sbjct: 357 --QSIPDSFIGHVEELAKHPYGCRVLQKT--FENLDDKMKRSLLDEMHKCVISLTEDQFG 412
Query: 281 NYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
NYVIQ+ + +DR ++V +L+ + K+ SNV
Sbjct: 413 NYVIQSVITVGKSEDR----NKVVDQLKGRITTFARHKFASNV 451
>gi|350585829|ref|XP_003482059.1| PREDICTED: pumilio homolog 1 isoform 1 [Sus scrofa]
Length = 640
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 145/326 (44%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 307 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 366
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 367 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 420
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 421 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 474
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 475 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 534
Query: 247 VVQKCLKYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRL 297
VV+KC+ + + +I+E+ + + + D+Y NYV+Q + AE Q ++
Sbjct: 535 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKI 593
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 594 VMH-----KIRPHIATLRKYTYGKHI 614
>gi|407039070|gb|EKE39443.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 394
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 142/319 (44%), Gaps = 16/319 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
N D L+QDQ GS+ +Q + + + D +F + L + +V K E
Sbjct: 75 NEDYLRLSQDQTGSRTVQHKIETSTTE-RDIIFDSIEKEAVTLSKDVFANYVIQKLFEFG 133
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +I ++T F+ S+ +G V+K I+ V + + + + ++
Sbjct: 134 VFWQKSQLIKRLTGS---FVELSLHMYGCRVVQKAIEFVDDIDKRI--IFNEIEDNIIAC 188
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ VI +C+E D I A L + H GC + ++ + +
Sbjct: 189 IQDQNGNHVIQKCVEKGDLKIIDSIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYP 248
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L I N LS+ + GNYV+Q+++ + P + I AL+G+ LS+ K S V++K
Sbjct: 249 LLEEILPNTLELSKDQYGNYVIQYIVE-KCPSERNKIRKALQGNIALLSMQKYSSNVIEK 307
Query: 251 CLKYQN--AVHYIIEELL----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
C N I++E+ + +L + D+Y NYV+Q + +DR + +V
Sbjct: 308 CFMCANLKGRQEILKEIYGVKKDGAPLLMMMRDQYANYVVQKIIENVSDEDREFMVNNVV 367
Query: 305 TKLQQHLAALRVMKYGSNV 323
+ +LR + Y ++
Sbjct: 368 LP---QINSLRKVPYAKHI 383
>gi|395526794|ref|XP_003765541.1| PREDICTED: pumilio homolog 1 isoform 2 [Sarcophilus harrisii]
Length = 1094
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 24/322 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 759 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 818
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + +I L ++ +G ++K ++ + PP + ++ L ++
Sbjct: 819 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLKC 872
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 873 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 932
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 933 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 992
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQ 301
C+ + + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 993 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH- 1050
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1051 ----KIRPHIATLRKYTYGKHI 1068
>gi|223995911|ref|XP_002287629.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976745|gb|EED95072.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 306
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 31/291 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L D+ + V EL + +G +V K E N+ A
Sbjct: 12 DQNGSRFIQQRLEVADAAEKRAVMSEVIPNMSELQNDVFGNYVVQKLFEFGNDEMKA--D 69
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFK----FLMMTKP 135
LK + + L S+ +G ++K L L Y V+ L + FK + +
Sbjct: 70 LKGALTNNMISL-SLQMYGCRVIQK------ALESLDYEVLCELLKEFKQSVLMCIQDQN 122
Query: 136 GSSVILQCLEP-SYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ +C+E S K +FI L + L CH GC L +++ ++ L
Sbjct: 123 GNHVMQKCIEVMSIKAKEAEFIVDDVLANVETLCCHPYGCRVLQRMLEHCVEFQKTATLD 182
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAIC-FALRGHYVDLSLTKCGSFVVQKCL 252
I + +L + GNYV+QHVL D++ + + LS K S VV+K L
Sbjct: 183 EIQLVHKTLLDDQYGNYVIQHVLQYGRDSDRDSLLKIIVENDLLKLSRQKFASNVVEKLL 242
Query: 253 KYQNA--VHYIIEELL-------------NSDQILQVANDKYGNYVIQTAL 288
KY NA + I+ E+L S +L + D Y NYV+QTA+
Sbjct: 243 KYGNARQRNAIVREMLQVVNESGTSQEGVGSTVLLLMVRDAYANYVVQTAI 293
>gi|451845819|gb|EMD59130.1| hypothetical protein COCSADRAFT_175690 [Cochliobolus sativus
ND90Pr]
Length = 893
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 134/297 (45%), Gaps = 28/297 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q+ L + +S + + +F + +LM +G +V KF E +++
Sbjct: 514 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQT 573
Query: 74 QLALIILKIT-----FQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFK 128
Q +++ K+ +Q++ + + + K + H L S +K L K
Sbjct: 574 QKKILVGKMKGHVLELANQMY-----------ACRVVQKALEHA--LTEQQASMVKELEK 620
Query: 129 FLMMT---KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
++ T + G+ VI + ++ H I +A + L+ + GC + ++ ++
Sbjct: 621 DVLKTVKDQNGNHVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVEE 680
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+R+ IL + L + GNYV QHV+ P I ++ ++ S K S
Sbjct: 681 PQRRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHKFAS 740
Query: 246 FVVQKCLKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQD 295
VV++CL N ++ +L+ ++ ++ + D YGNYVIQ L R D
Sbjct: 741 NVVERCLICSNDAQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQKLLDTLTRDD 797
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + A + G + ++ ++ + + NA L + GNYV+Q D
Sbjct: 513 HVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQ 572
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY----QNAVHYIIEELLNSDQILQVAND 277
+ ++GH ++L+ VVQK L++ Q A +++EL +L+ D
Sbjct: 573 TQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQA--SMVKEL--EKDVLKTVKD 628
Query: 278 KYGNYVIQTALAETMRQDRLSVH--QRLVTKLQQHLAALRVMKYGSNV 323
+ GN+VIQ + DR+ +H Q++V + ++ L V YG V
Sbjct: 629 QNGNHVIQKVI------DRVPMHHIQKIVEAFRGNVGVLSVNSYGCRV 670
>gi|393220554|gb|EJD06040.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 486
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 145/313 (46%), Gaps = 24/313 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+ + DQ GS+++Q+ L + S +F +V G +L+ +G +V K E +
Sbjct: 139 IVEFSGDQHGSRFIQQKLETATSDEKQIVFDEIVPGAALQLIQDVFGNYVIQKLFE--HG 196
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+Q+ IL + + L S+ +G V+K I+ V LP + L+ +
Sbjct: 197 TQVQKTILANAMEGHILAL-SLQMYGCRVVQKAIEFV--LPEQQASFVKELEGHVLRCVK 253
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
G+ VI + LE + F+ QA + L+ H GC L ++MK + + +L
Sbjct: 254 DANGNHVIQKLLERVSPERLGFV-QAFKGNVYELSTHPYGCRVLQRVFEHMKEEQTRPLL 312
Query: 193 HLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+ +L + + GNYVVQ VL ++D L I LRG + ++ K S V +
Sbjct: 313 DELHKYTINLMQDQFGNYVVQFVLEHGPVQDRLL---IISKLRGQMLQMAKHKFASNVCE 369
Query: 250 KCLKYQNAVHY--IIEELLNS-----DQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
K L ++ + ++EE++ I+ + D+Y NYV+Q AL + D+ V
Sbjct: 370 KALVMADSENRRLLVEEMITPKADGVSPIVTMMKDQYANYVLQRALT-VVEGDQKEV--- 425
Query: 303 LVTKLQQHLAALR 315
++K++ LA +R
Sbjct: 426 FISKVRPQLATMR 438
>gi|407038528|gb|EKE39174.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
nuttalli P19]
Length = 222
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALE--HCLYLACHEQGCINLNNFIDNMKGSR 187
L+ G+ VI +CL+ N FI+ A + + + +A H+ GC + ID
Sbjct: 13 LIFDSNGNHVIQECLKTFGKSDNGFIFDAIVSDGNLVKVATHKHGCCVVQRCID---YGN 69
Query: 188 RKQILHLIS---VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
R+Q++ LI N+ L + GNYVVQ++L+++ +I + L +DLS+ K
Sbjct: 70 RQQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVIIDVTKMLLDDLIDLSMQKFS 129
Query: 245 SFVVQKCLKYQ--NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
S V++K ++ A I + L + ++ D Y NYVIQT L Q + H +
Sbjct: 130 SNVIEKLVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLD----QSSVEYHSK 185
Query: 303 LVTKLQQHLAALRVMKY 319
L + HL+A+R Y
Sbjct: 186 LSNWIIPHLSAIRNTPY 202
>gi|299883578|emb|CBD70070.1| pumilio-related protein [Pelophylax lessonae]
Length = 1204
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 145/323 (44%), Gaps = 26/323 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 869 IIEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 928
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + PP + ++ L ++
Sbjct: 929 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQVINDMVRELDGHVLK 981
Query: 133 ---TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 982 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTL 1041
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+
Sbjct: 1042 PILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVE 1101
Query: 250 KCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVH 300
KC+ + + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1102 KCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH 1160
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1161 -----KIRPHIATLRKYTYGKHI 1178
>gi|119467660|ref|XP_001257636.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
gi|119405788|gb|EAW15739.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
Length = 908
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 23/323 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S +++F + +LM+ +G +V K E
Sbjct: 494 NH-IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 552
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 553 NQSQKKILANQMKGH---VLALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 604
Query: 131 M---MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E + FI A LA H GC + +++ +
Sbjct: 605 LKCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVD 664
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
R+ IL + A L + GNYV+QHV+ + + + + S K S V
Sbjct: 665 RESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNV 724
Query: 248 VQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+K +++ ++ II L ++++ +L + D+YGNYVIQ L + ++R
Sbjct: 725 VEKSIEFGEESQRRQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKGEER---- 780
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ L+ +++ L+ L+ YG +
Sbjct: 781 EALIDQIRPLLSQLKKFSYGKQI 803
>gi|297282793|ref|XP_001096525.2| PREDICTED: pumilio homolog 1 isoform 3 [Macaca mulatta]
gi|332808250|ref|XP_001157224.2| PREDICTED: pumilio homolog 1 isoform 4 [Pan troglodytes]
gi|397515863|ref|XP_003828161.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan paniscus]
gi|402853681|ref|XP_003891519.1| PREDICTED: pumilio homolog 1 isoform 2 [Papio anubis]
Length = 1044
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 709 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 768
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 769 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 825
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 826 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 885
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 886 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 945
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 946 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 999
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1000 HKIRPHIATLRKYTYGKHI 1018
>gi|193788405|dbj|BAG53299.1| unnamed protein product [Homo sapiens]
Length = 925
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 590 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 649
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 650 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 705
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 706 DQNGNHVVQKCVECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 765
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 766 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 825
Query: 253 KYQNAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + + + D+Y NYV+Q + D QR +
Sbjct: 826 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 879
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 880 MHKIRPHIATLRKYTYGKHI 899
>gi|323304919|gb|EGA58676.1| Puf4p [Saccharomyces cerevisiae FostersB]
Length = 705
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 18/249 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ SL +DQ G ++LQ+ L S+ D +F +T ELM+ +G ++ K +E
Sbjct: 452 IHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTE 511
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV-----AHLPPLLYHVMSALKRLFK 128
Q +++ KI+ F+ S++ G+ +++KLI+ + A + V+ +L+
Sbjct: 512 Q-RIVLTKIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI------VVDSLRPYTV 562
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
L G+ VI +CL+ FI+ A + C+ +A H GC L +D+ +
Sbjct: 563 QLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQC 622
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
+ + L+ GNYVVQ++++ E I L+ ++LS+ K G
Sbjct: 623 DNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFG 682
Query: 245 SFVVQKCLK 253
S V++K L+
Sbjct: 683 SNVIEKNLE 691
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ +I + LE + + + + H + ++ + G L I+ +K
Sbjct: 491 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 550
Query: 190 QIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCG 244
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 551 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 606
Query: 245 SFVVQKCLKYQNAVHYIIEELLN-SDQILQVAN----DKYGNYVIQTALAETMRQDRLSV 299
V+Q+CL H E+ N D++L + + D +GNYV+Q + + +++
Sbjct: 607 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 661
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
++V L+ L + K+GSNV
Sbjct: 662 THKIVHLLKPRAIELSIHKFGSNV 685
>gi|449710328|gb|EMD49428.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 422
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 13/292 (4%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
N D L+QDQ GS+ +Q + + + D +F + L + +V K E
Sbjct: 103 NEDYLRLSQDQTGSRTVQHKIETSTTE-RDIIFDSIEKEAVTLSKDVFANYVIQKLFEFG 161
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +I ++T F+ S+ +G V+K I+ V + + + + ++
Sbjct: 162 VFWQKSQLIKRLTGS---FVELSLHMYGCRVVQKAIEFVDDIDKRI--IFNEIEDNIIAC 216
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ VI +C+E D I A L + H GC + ++ + +
Sbjct: 217 IQDQNGNHVIQKCVEKGDLKIIDSIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYP 276
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L I N LS+ + GNYV+Q+++ + P + I AL+G+ LS+ K S V++K
Sbjct: 277 LLEEILPNTLELSKDQYGNYVIQYIVE-KCPSERNKIRKALQGNIALLSMQKYSSNVIEK 335
Query: 251 CLKYQN--AVHYIIEELL----NSDQILQVANDKYGNYVIQTALAETMRQDR 296
C N I++E+ + +L + D+Y NYV+Q + +DR
Sbjct: 336 CFMCANLKGRQEILKEIYGVKKDGAPLLMMMRDQYANYVVQKIIENVSDEDR 387
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 166 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLID 225
L+ H GC + I+ + ++ I + I N + + ++GN+V+Q + D +ID
Sbjct: 180 LSLHMYGCRVVQKAIEFVDDIDKRIIFNEIEDNIIACIQDQNGNHVIQKCVEKGDLKIID 239
Query: 226 AICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYV 283
+I FA +G + S G V+Q+ L+ + ++EE+L + L+++ D+YGNYV
Sbjct: 240 SIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYPLLEEILPN--TLELSKDQYGNYV 297
Query: 284 IQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
IQ + + S ++ LQ ++A L + KY SNV
Sbjct: 298 IQYIVEKCP-----SERNKIRKALQGNIALLSMQKYSSNV 332
>gi|406698770|gb|EKD01997.1| RNA binding protein Pumilio [Trichosporon asahii var. asahii CBS
8904]
Length = 711
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 34/297 (11%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
A DQ GS+++Q L + K+F + F LM+ +G +V K E + +Q A
Sbjct: 331 FASDQHGSRFIQNKLETASPEERQKVFEEILPNAFSLMTDVFGNYVIQKLFEHGDAAQKA 390
Query: 77 LIILKITFQDQLFLLASVDKFG---------SSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
+I K+ Q LFL S +G + + K+VA L H++ +K
Sbjct: 391 ALIKKMEGQ-ALFL--SNHMYGCRVMQTALEHARTEDRAKLVAE---LDGHIIECVKSSN 444
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
++ + L L+P + FI H L+ H GC L + + +
Sbjct: 445 ANHVIQR------LITLDPPRGFMDAFI-----GHVRELSTHPFGCRVLQKSFEVLPPEK 493
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLED--PFLIDAICFALRGHYVDLSLTKCGS 245
+ +L + + L ++ GNYVVQ V++ + D ++ DL K S
Sbjct: 494 IRPLLDEMHTCSHELMINQFGNYVVQSVITEGEGRKHDRDLAVAEIKTRIFDLCRHKFAS 553
Query: 246 FVVQKCLKYQNAV--HYIIEELLNSD----QILQVANDKYGNYVIQTALAETMRQDR 296
VV+K LK+ N +I E++ D +I + D+YGN+ +QTALAE + R
Sbjct: 554 NVVEKALKHANPADKRELISEMIGDDSGENRIQTLLRDQYGNFPVQTALAEAEKDQR 610
>gi|357445493|ref|XP_003593024.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482072|gb|AES63275.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 396
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 23/295 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE- 72
+ S+A + QYL + G+ + V + +LM ++G + K E+
Sbjct: 116 VVSMAITERDCQYLHAIIDEGNPTNAAMILSKVKDYLHDLMMHRFGSTLIKKIFEAKKGM 175
Query: 73 --SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q+ I+ I D+ ++ +G+ ++ ++ H P + + V A+KR L
Sbjct: 176 AMEQMDSIVYLILANDRKMWDVCINYYGTRVMQTILHNTRH-PFMKFVVAYAVKRNTTAL 234
Query: 131 MMTKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
M GS VI+QC++ PS K I +C +A + GC+ + + + +G+
Sbjct: 235 MKNTNGSHVIVQCVKLFPSILKK--MILDEVARNCCNIATDKIGCLAVKRCLKHGEGTAI 292
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
++ I NA L YV++ L ++I+ + + LS+ K S V+
Sbjct: 293 DLLVTQIISNAMVL-------YVIKMKFPLAKEWMIE----EFQNKFDRLSMNKYASNVM 341
Query: 249 QKCLKYQN--AVHYIIEELLNSDQILQVANDKYGNYV--IQTALAETMRQDRLSV 299
+ L++ N AV I+EE++ S L+V D +GNYV ++ L+ ++ RL++
Sbjct: 342 EYLLRFSNKSAVKVIVEEIMRSRNFLKVLQDPFGNYVGHMRRKLSNLIKFHRLAL 396
>gi|146412760|ref|XP_001482351.1| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 149/313 (47%), Gaps = 23/313 (7%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q+ L + + + +F + ++ELM+ +G +V K+ E N +Q
Sbjct: 426 FTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKYFEYGNNTQ-K 484
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++LK ++ L S+ +G V++ ++ V +L ++ L+ + G
Sbjct: 485 QVLLKFMI-GHIYEL-SLQMYGCRVVQRALEAVDLKGQIL--IIDELRDHILVCAKDQNG 540
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E + FI + + +L+ H GC + ++ R++++L ++
Sbjct: 541 NHVIQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLLEYADPKRQQEMLDELN 600
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
L + + GNYV+QH+L +AI + G V+ S K S V++KC+K+
Sbjct: 601 RFIFYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNVIEKCIKFGT 660
Query: 257 AVH--YIIEELL--NSDQILQVANDK----------YGNYVIQTALAETMRQDRLSVHQR 302
I++E++ N D ++ +D+ Y NYVIQ L E D +R
Sbjct: 661 VKQKRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQK-LVEGF--DAKGEEKR 717
Query: 303 -LVTKLQQHLAAL 314
LV KL+Q+L +
Sbjct: 718 MLVMKLRQYLKQI 730
>gi|334329171|ref|XP_003341193.1| PREDICTED: pumilio homolog 1 isoform 2 [Monodelphis domestica]
Length = 1094
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 24/322 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 759 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 818
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + +I L ++ +G ++K ++ + PP + ++ L ++
Sbjct: 819 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLKC 872
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 873 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 932
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 933 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 992
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQ 301
C+ + + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 993 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH- 1050
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1051 ----KIRPHIATLRKYTYGKHI 1068
>gi|406607837|emb|CCH40775.1| putative translational repressor [Wickerhamomyces ciferrii]
Length = 729
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 153/335 (45%), Gaps = 35/335 (10%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D+ L+ DQ G ++LQ+ L D I D +F + +L+ +G ++ K I+ +
Sbjct: 270 DILKLSVDQYGCRFLQKKLDL-DVSIKDVIFNKIFNNLIDLIINPFGNYLIQKLIDYLSN 328
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRL------ 126
Q L+I KI LFL+ S++++G+ S++K+I V++ Y + +K L
Sbjct: 329 YQKDLLIEKI--HTYLFLI-SINQYGTRSLQKIIDKVSNT----YQIDLIIKGLQINDVT 381
Query: 127 -------FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAAL--EHCLYLACHEQGCINLN 177
L+ G+ VI +C+ K FI + + + ++ H+ GC L
Sbjct: 382 NGIDDNNIVKLIKDLNGNHVIQKCIFKFPPEKFQFIIDSICINNNIVRISTHKHGCCVLQ 441
Query: 178 NFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSL-------EDPFLIDAICFA 230
++N ++ I ++ + L + GNY++Q + L FLID
Sbjct: 442 KLLNNANFNQILNIAKMLLIYLDDLINDQFGNYIIQFLFELNFLKTSKNISFLIDEFFNK 501
Query: 231 LRGHYVDLSLTKCGSFVVQ---KCLKYQNAVHYIIEELLNSDQILQ-VANDKYGNYVIQT 286
+ + + LS K S VV+ K LK++ Y+ E + D + + DK+GNYVIQT
Sbjct: 502 IYNNLIQLSCLKFSSNVVEKFIKILKFKQNYLYLTEIIKLVDYNFELLIKDKFGNYVIQT 561
Query: 287 ALAETMRQDRLSVH-QRLVTKLQQHLAALRVMKYG 320
+ + LS +L+ ++ +L A++ Y
Sbjct: 562 LIDQFYDVSELSSEMNKLIVNIKSYLPAIKSAPYA 596
>gi|400597485|gb|EJP65218.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 809
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 22/292 (7%)
Query: 13 DLFS----LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE 68
D++S + DQ GS+++Q+ L + +S +++F + +LM +G +V KF E
Sbjct: 426 DIYSYVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIEPNAIQLMKDVFGNYVVQKFFE 485
Query: 69 SCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFK 128
N+ Q ++ K+ + + SV + V+K ++ V L+ K L
Sbjct: 486 HGNQVQKKILAEKMRGK---VVDLSVQVYACRVVQKALEHV-----LVEQQAELTKELSP 537
Query: 129 FLMMT---KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
++ + G+ VI + +E DFI A LA H GC + ++
Sbjct: 538 DIIRVIRDQNGNHVIQKIIELVPRQYIDFIMDALRGQVTGLASHTYGCRVIQRMLEYGTE 597
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ + +I+ + +A L + GNYV QHV+ P D + + + LS K S
Sbjct: 598 TDKLEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFAS 657
Query: 246 FVVQKCLKYQNAVHY--IIEELL-----NSDQILQVANDKYGNYVIQTALAE 290
VV+KC+++ I E+L S + + D+YGNYVIQ L +
Sbjct: 658 NVVEKCIEHGTPAQRSAIREQLTTVVSDGSSPLQLMMRDQYGNYVIQKLLGQ 709
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 204 RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY--I 261
R ++GN+V+Q ++ L ID I ALRG L+ G V+Q+ L+Y I
Sbjct: 544 RDQNGNHVIQKIIELVPRQYIDFIMDALRGQVTGLASHTYGCRVIQRMLEYGTETDKLEI 603
Query: 262 IEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 321
+ EL S QIL D+YGNYV Q + +DR +L+ + L L K+ S
Sbjct: 604 MTELHASAQIL--ITDQYGNYVAQHVIQNGKPEDR----DKLIQLVMSQLLTLSKHKFAS 657
Query: 322 NV 323
NV
Sbjct: 658 NV 659
>gi|74180929|dbj|BAE27746.1| unnamed protein product [Mus musculus]
Length = 944
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 141/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 611 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 670
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 671 QKLAL---AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 724
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + + +
Sbjct: 725 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILGHCLPD 778
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 779 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 838
Query: 247 VVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 839 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 892
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 893 GQRKIVMHKIRPHIATLRKYTYGKHI 918
>gi|403293272|ref|XP_003937644.1| PREDICTED: pumilio homolog 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1044
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 709 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 768
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 769 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 825
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 826 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 885
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 886 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 945
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 946 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 999
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1000 HKIRPHIATLRKYTYGKHI 1018
>gi|354472365|ref|XP_003498410.1| PREDICTED: pumilio homolog 1 isoform 4 [Cricetulus griseus]
Length = 1107
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 774 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 833
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 834 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 887
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 888 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 941
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 942 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1001
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1002 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 1055
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1056 GQRKIVMHKIRPHIATLRKYTYGKHI 1081
>gi|296207290|ref|XP_002750600.1| PREDICTED: pumilio homolog 1 isoform 4 [Callithrix jacchus]
Length = 1044
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 709 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 768
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 769 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 825
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 826 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 885
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 886 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 945
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 946 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 999
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1000 HKIRPHIATLRKYTYGKHI 1018
>gi|301122711|ref|XP_002909082.1| pumilio-like mating protein M90 [Phytophthora infestans T30-4]
gi|262099844|gb|EEY57896.1| pumilio-like mating protein M90 [Phytophthora infestans T30-4]
Length = 926
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 153/338 (45%), Gaps = 40/338 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
LF A+DQ GS+++Q+ L D R+ F + + LM+ +G +V KF+E +
Sbjct: 588 LFLFAKDQTGSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVIQKFLEYGSLE 647
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
Q L++ +T + LA + +G +++ ++V + ++ +++L +M
Sbjct: 648 QQQLLVELMT--SNMISLA-LQVYGCRVIQRALEVTQ-----VEEQLALIRQLKGHVMKC 699
Query: 132 -MTKPGSSVILQCLEP-SYNHKND----------------FIYQAALEHCLYLACHEQGC 173
+ G+ V+ +C+E S+ + FI + + L+ H GC
Sbjct: 700 VTDQNGNHVLQKCIEAASWKRAAECKGLRPQRFVTGEDIQFIIDSFVGQAASLSTHSYGC 759
Query: 174 INLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRG 233
+ +++ ++ + +L I L + + GNYVVQHV+S +P + + A+
Sbjct: 760 RVIQRVLEHCAPNQIRPLLDEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRNIVMQAVLP 819
Query: 234 HYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQ------ILQVANDKYGNYVIQ 285
S K S VV+ CL++ + + I++ +L D+ +L + YGNYV+Q
Sbjct: 820 EIARWSQHKYASNVVESCLEHATKEEISQIVDFILQCDESGASCALLPMMKHMYGNYVVQ 879
Query: 286 TALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L DR R++ ++ + L+ +G +V
Sbjct: 880 KLLERADDHDR----HRIICIIRHNEDYLKRFTFGKHV 913
>gi|15219041|ref|NP_173581.1| protein pumilio 20 [Arabidopsis thaliana]
gi|332192006|gb|AEE30127.1| protein pumilio 20 [Arabidopsis thaliana]
Length = 308
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 32/232 (13%)
Query: 65 KFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALK 124
+ I ++ +L + +T FL+ + + GS ++KL+ + L +A+
Sbjct: 70 QMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAAIL 126
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
R F ++ K S V+ + + K +Y EH L+ A H
Sbjct: 127 RRFLHIITDKYASYVVRRGMTVFDKKKKKAMY----EHILHYASH--------------- 167
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+R K +A LS GN+V+Q VL L D + I +LRGH+VDLS K G
Sbjct: 168 IARDK--------HALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYG 219
Query: 245 SFVVQKCLKYQNAVHYIIEELL--NSDQILQVANDKYGNYVIQTALAETMRQ 294
S+VV L+ + ++ ++EEL+ D ++++A ++YGN+++ AL T ++
Sbjct: 220 SYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKE 271
>gi|194390836|dbj|BAG62177.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 709 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 768
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 769 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 825
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 826 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 885
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 886 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 945
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 946 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 999
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1000 HKIRPHIATLRKYTYGKHI 1018
>gi|327286699|ref|XP_003228067.1| PREDICTED: pumilio homolog 1-like isoform 2 [Anolis carolinensis]
Length = 1091
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 24/322 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 756 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 815
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + +I L ++ +G ++K ++ + PP + ++ L ++
Sbjct: 816 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLKC 869
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 870 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 929
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 930 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 989
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQ 301
C+ + + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 990 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH- 1047
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1048 ----KIRPHIATLRKYTYGKHI 1065
>gi|167393984|ref|XP_001740790.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165894881|gb|EDR22713.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 435
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 133/288 (46%), Gaps = 31/288 (10%)
Query: 23 GSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 82
G LQ+ L + +F + EL++ G+++ K +E +E
Sbjct: 135 GCSLLQKLLDGASKESVLLIFKEIEDSLEELITHPNGQYILPKIVEFGSEE--------- 185
Query: 83 TFQDQLFLLASVD-------KFGSSSVKKLIKVVA--HLPPLLYHVMSALKRLFKFLMMT 133
+D +F + S + +FG +V+K+ + H+ + S + R +++
Sbjct: 186 -IKDNVFGVVSENLVKYCCHQFGGYTVQKIAPFMRERHI-----QIWSPILRNNIAILII 239
Query: 134 KPGSSVILQCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
P ++ ++Q L +N KN DF Y+ + + ++ + GC L + +DN + I
Sbjct: 240 DPHANYVIQTLLKIFNEKNSDFFYRGLKDCVVDISKTKIGCSVLTHAMDNSTIQQINSIK 299
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ N L + + GN+++QH++ DP +I I ++ + V S K S VV+KCL
Sbjct: 300 PQLLSNCCDLIQDQYGNFIIQHLME-NDPTIISDIIHKIKDNIVFYSKQKFSSNVVEKCL 358
Query: 253 K--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQT---ALAETMRQD 295
K +N +++ L + ++ + D+YGN+VIQ L E R++
Sbjct: 359 KCSTENVRQPLLDVLSQPESLVALVEDQYGNFVIQAFLDVLPENRREE 406
>gi|61098182|ref|NP_001012858.1| pumilio homolog 1 [Gallus gallus]
gi|60098393|emb|CAH65027.1| hypothetical protein RCJMB04_1f11 [Gallus gallus]
Length = 1093
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 24/322 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 758 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 817
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + +I L ++ +G ++K ++ + PP + ++ L ++
Sbjct: 818 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLKC 871
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 872 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 931
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 932 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 991
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQ 301
C+ + + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 992 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH- 1049
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1050 ----KIRPHIATLRKYTYGKHI 1067
>gi|269864285|ref|XP_002651521.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
gi|220064375|gb|EED42535.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
Length = 331
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 24/284 (8%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
F + QDQEGS+++Q L S + + + F + F +L +G +V K I +
Sbjct: 48 FKVCQDQEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKE 107
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK 134
++ + F ++LL S +G ++KLI + + ++S L+ L+ +
Sbjct: 108 YDILCKR--FSGSIYLL-STHIYGCRVIQKLIDFITDIT----FIISELQDHILELIASP 160
Query: 135 PGSSVILQCLEPS---YNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI +C++ S + I + C+ L+ GC L + + ++
Sbjct: 161 NGNHVIQKCIDRSIIENKIFINNIINEFEKDCISLSQQRYGCRVLQRLFEISAPEKVDRL 220
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFA-LRGHYVDLSLTKCGSFVVQK 250
L +I N L R GNYV+QH+ ++ + I F + + V+LS K S V++K
Sbjct: 221 LGIIVDNIQELINDRYGNYVIQHL--IQSNYKQKEIIFKYIISNAVELSRYKFSSNVIEK 278
Query: 251 CLKYQNAVHYIIEELL---------NSDQILQVANDKYGNYVIQ 285
C+ NA +E+ L N + + D Y NYV+Q
Sbjct: 279 CVV--NASKRELEQFLESFAQLAENNKPALFYMCTDMYANYVVQ 320
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Query: 165 YLACHEQ-GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFL 223
+ C +Q G + N +D+ G + I LS + GNYV+Q ++ L
Sbjct: 48 FKVCQDQEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKE 107
Query: 224 IDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYV 283
D +C G LS G V+QK + + + +II EL D IL++ GN+V
Sbjct: 108 YDILCKRFSGSIYLLSTHIYGCRVIQKLIDFITDITFIISEL--QDHILELIASPNGNHV 165
Query: 284 IQTALAET 291
IQ + +
Sbjct: 166 IQKCIDRS 173
>gi|23505401|gb|AAN37689.1| pumilio-like mating protein M90 [Phytophthora infestans]
Length = 875
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 153/338 (45%), Gaps = 40/338 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
LF A+DQ GS+++Q+ L D R+ F + + LM+ +G +V KF+E +
Sbjct: 537 LFLFAKDQTGSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVIQKFLEYGSLE 596
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
Q L++ +T + LA + +G +++ ++V + ++ +++L +M
Sbjct: 597 QQQLLVELMT--SNMISLA-LQVYGCRVIQRALEVTQ-----VEEQLALIRQLKGHVMKC 648
Query: 132 -MTKPGSSVILQCLEP-SYNHKND----------------FIYQAALEHCLYLACHEQGC 173
+ G+ V+ +C+E S+ + FI + + L+ H GC
Sbjct: 649 VTDQNGNHVLQKCIEAASWKRAAECKGLRPQRFVTGEDIQFIIDSFVGQAASLSTHSYGC 708
Query: 174 INLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRG 233
+ +++ ++ + +L I L + + GNYVVQHV+S +P + + A+
Sbjct: 709 RVIQRVLEHCAPNQIRPLLDEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRNIVMQAVLP 768
Query: 234 HYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQ------ILQVANDKYGNYVIQ 285
S K S VV+ CL++ + + I++ +L D+ +L + YGNYV+Q
Sbjct: 769 EIARWSQHKYASNVVESCLEHATKEEISQIVDFILQCDESGASCALLPMMKHMYGNYVVQ 828
Query: 286 TALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L DR R++ ++ + L+ +G +V
Sbjct: 829 KLLERADDHDR----HRIICIIRHNEDYLKRFTFGKHV 862
>gi|426221805|ref|XP_004005097.1| PREDICTED: pumilio homolog 1 isoform 2 [Ovis aries]
Length = 1038
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 703 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 762
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 763 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 819
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 820 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 879
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 880 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 939
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 940 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH---- 994
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 995 -KIRPHIATLRKYTYGKHI 1012
>gi|387017906|gb|AFJ51071.1| Pumilio homolog 1-like [Crotalus adamanteus]
Length = 1185
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 24/322 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 850 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 909
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + +I L ++ +G ++K ++ + PP + ++ L ++
Sbjct: 910 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLKC 963
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 964 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 1023
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 1024 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 1083
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQ 301
C+ + + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1084 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH- 1141
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1142 ----KIRPHIATLRKYTYGKHI 1159
>gi|402225601|gb|EJU05662.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 356
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 145/315 (46%), Gaps = 20/315 (6%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
+ DQ GS+++Q L + +F +++G L++ +G +V K IE E++
Sbjct: 44 EFSADQHGSRFIQIKLDTATPEEKQMVFDEILAGNIMPLVTDVFGNYVIQKLIEFGGETE 103
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTK 134
I + FL+ S +G V+K I+ + P +++ L +
Sbjct: 104 RNAIFEAMQGH---FLILSWHMYGCRVVQKAIEYIT--PEQQSQLIAELAPDIMKCVKDA 158
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ V+ + +E + F+ A + +Y L+ H GC L ++++ + + +L
Sbjct: 159 NGNHVVQKLIERVSPDRLTFV--EAFKGSVYDLSTHTYGCRVLQRCLEHLTEEQTRPLLD 216
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + A+L + + GNYVVQ VL P + LRG + ++ K S V +K L
Sbjct: 217 ELHEHTANLMQDQFGNYVVQFVLEHGQPEDRARVIAKLRGQMLMMACHKFASNVCEKALM 276
Query: 254 YQNAV--HYIIEELLNS-----DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
++ +I+EL+ + + D++ NYV+Q AL+ + D+L Q L ++
Sbjct: 277 TADSESRRLLIDELMTPKPNGVSPVQLMMKDQFANYVLQRALS-VVEGDQL---QALASR 332
Query: 307 LQQHLAALRVMKYGS 321
++ HL ++R GS
Sbjct: 333 IRPHLGSMRKFTAGS 347
>gi|74184013|dbj|BAE37045.1| unnamed protein product [Mus musculus]
Length = 1108
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 775 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 834
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 835 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 888
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 889 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 942
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 943 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1002
Query: 247 VVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1003 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 1056
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1057 GQRKIVMHKIRPHIATLRKYTYGKHI 1082
>gi|145547968|ref|XP_001459665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427491|emb|CAK92268.1| unnamed protein product [Paramecium tetraurelia]
Length = 640
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 149/319 (46%), Gaps = 16/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + A+ Q GS+ +Q++ ++ LD+L + +LM Y ++FG +SC
Sbjct: 327 IVNFAKTQHGSRLIQKHFTTCTQIELDQLLQEIGSNIGDLMIDPYANYMFGSLSQSCAPH 386
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q L IL+ T ++L +A DK G+ +++ L+ +++ V +++K L +
Sbjct: 387 Q-RLYILQ-TISNRLVDIA-CDKKGTHAIQSLVSLISSKQE-EEMVENSIKNHIINLTLD 442
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
G+ +I + + + + I+ +E + + H+ G L + I K + K
Sbjct: 443 SQGTHLIKKIIARFSEDRLNLIFSKLMEKFIQVVNHQFGLCVLKDLITKFKNNPEKCTFI 502
Query: 194 LISVNAA--SLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
LI + + + GNY VQH + + I + V LS+ K S VV+KC
Sbjct: 503 LIKMRDQLDDIVQDPFGNYGVQHAIDVYGDLKCTPIIDKILQKLVQLSIHKYSSNVVEKC 562
Query: 252 LKYQNAV--HYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
+ +A I++L L++ +K+G +V+Q AL E ++L ++L LQ+
Sbjct: 563 ILETSAKTQKRFIKQLSQDVICLELMKNKFGTFVLQKALQEA---EKLGEGEQLQQALQR 619
Query: 310 HLAALRVMKYGSNVY-KWT 327
+L ++ Y ++ KWT
Sbjct: 620 NLPSI----YAQSIRQKWT 634
>gi|123913364|sp|Q2VB19.1|PUM1_CHICK RecName: Full=Pumilio homolog 1
gi|82569972|gb|ABB83588.1| pumilio 1 [Gallus gallus]
Length = 1189
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 24/322 (7%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 913
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q + +I L ++ +G ++K ++ + PP + ++ L ++
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQVINEMVRELDGHVLKC 967
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 968 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 1027
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 1028 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 1087
Query: 251 CLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQ 301
C+ + + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1088 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH- 1145
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1146 ----KIRPHIATLRKYTYGKHI 1163
>gi|28394605|gb|AAO38522.1| pumilio RBD [Schistocerca americana]
Length = 322
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 8/257 (3%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + +QDQ G +++Q+ L +F + + LM+ +G +V KF E
Sbjct: 57 NH-IVEFSQDQHGPRFIQQKLERATVAEKQMVFSEILAAAYNLMTDVFGNYVIQKFFEFG 115
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + K+ L ++ +G +++ ++ ++ P ++ L
Sbjct: 116 TPEQKTTLAQKVRGH---VLPLALQMYGCRVIQRALESIS--PEQQEEIVRELDGHVLKC 170
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ +C+E H FI A L+ H GC + +++ +
Sbjct: 171 VKDQNGNHVVQKCIECVDPHALQFIINAFSGQVFALSTHPYGCRVIQRILEHCTPEQTAP 230
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + + GNYV+QHVL P I ++RG + LS K S VV+K
Sbjct: 231 ILEELHRHTEQLIQDQYGNYVIQHVLEHGKPEDKSQIILSVRGKVLVLSQHKFASNVVEK 290
Query: 251 CLKYQNAVH--YIIEEL 265
C+ + +IEE+
Sbjct: 291 CVTHATRAERAVLIEEV 307
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ VI + E + + Q H L LA GC + ++++ +++
Sbjct: 98 LMTDVFGNYVIQKFFEFGTPEQKTTLAQKVRGHVLPLALQMYGCRVIQRALESISPEQQE 157
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+I+ + + + ++GN+VVQ + DP + I A G LS G V+Q
Sbjct: 158 EIVRELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFSGQVFALSTHPYGCRVIQ 217
Query: 250 KCLKY--QNAVHYIIEEL-LNSDQILQVANDKYGNYVIQTALAETMRQDR----LSVHQR 302
+ L++ I+EEL +++Q++Q D+YGNYVIQ L +D+ LSV +
Sbjct: 218 RILEHCTPEQTAPILEELHRHTEQLIQ---DQYGNYVIQHVLEHGKPEDKSQIILSVRGK 274
Query: 303 LVTKLQQHLAALRVMKYGSNVYK 325
++ L QH K+ SNV +
Sbjct: 275 VLV-LSQH-------KFASNVVE 289
>gi|407040339|gb|EKE40075.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 435
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 29/242 (11%)
Query: 82 ITFQDQLFLLASVDKFGSSSVK---------KLIKVVAH---------LPPLL----YHV 119
IT + ++L + +FGS +K L+K H + P + +
Sbjct: 166 ITHPNGQYVLPKIVEFGSEEIKDNVFGVVAENLVKYCCHQFGGYTVQKIAPFMRERHIQI 225
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNN 178
S + R +++ P ++ ++Q L +N KN + + L+ C+ ++ + GC L +
Sbjct: 226 WSPILRNNIAILVIDPHANYVIQTLLKIFNEKNSYFFYGGLKDCVVRISKTKIGCSVLTH 285
Query: 179 FIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDL 238
IDN + I + N L + + GN+V+QH++ DP +I I ++ V
Sbjct: 286 AIDNSTTQQINLIKPQLLSNCCDLIQDQYGNFVIQHLME-NDPTIISDIIQKIKDDVVFY 344
Query: 239 SLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQT---ALAETMR 293
S K S VV+KCLK +N +++ L D + + D+YGN+VIQ AL E +
Sbjct: 345 SKQKFSSNVVEKCLKCSTENERQPLLDILSQPDSLDALVEDQYGNFVIQAFLDALPEKTK 404
Query: 294 QD 295
++
Sbjct: 405 EE 406
>gi|452846127|gb|EME48060.1| hypothetical protein DOTSEDRAFT_69859 [Dothistroma septosporum
NZE10]
Length = 945
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 139/299 (46%), Gaps = 41/299 (13%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q L + +S D++F + LM+ +G +V KF E + S ++
Sbjct: 543 DQHGSRFIQTKLETANSDEKDRVFREIEPNAIPLMTDVFGNYVIQKFFEHGDMSHKKILA 602
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLI---------KVVAHLPPLLYHVMSALKRLFKFL 130
K+ QDQ++ L S +G V+K + ++VA L HV+ +K
Sbjct: 603 KKM--QDQVYSL-SKQMYGCRVVQKALDHVLVEQQQQLVAE---LKGHVLDCVK------ 650
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + +E + FI +A + L+ H GC + ++ ++
Sbjct: 651 --DQNGNHVIQKAIERCHPSTIAFIIEAFVGQVPSLSIHAYGCRVIQRCLEKCDLPQKSM 708
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLED----PFLIDAICFALRGHYVDLSLTKCGSF 246
I+ + + ++ + GNYVVQHV++ ++ ++D + L G+ S K S
Sbjct: 709 IMAELLQSIHTMISDQFGNYVVQHVVAHDEGECRSHVLDIVMNNLEGY----SKHKFASN 764
Query: 247 VVQKCLKYQNA--VHYIIEELLNSDQ--------ILQVANDKYGNYVIQTALAETMRQD 295
VV+KCL+ + H ++ L+N+ Q I+ + D +GNYVIQ L QD
Sbjct: 765 VVEKCLEKSDERWRHEVVVRLVNNSQRRIEGESPIVLMIKDNFGNYVIQKLLDTLNAQD 823
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 172 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFAL 231
GC + +D++ +++Q++ + + + ++GN+V+Q + P I I A
Sbjct: 618 GCRVVQKALDHVLVEQQQQLVAELKGHVLDCVKDQNGNHVIQKAIERCHPSTIAFIIEAF 677
Query: 232 RGHYVDLSLTKCGSFVVQKCLK----YQNAVHYIIEELLNSDQILQVANDKYGNYVIQTA 287
G LS+ G V+Q+CL+ Q ++ I+ ELL S I + +D++GNYV+Q
Sbjct: 678 VGQVPSLSIHAYGCRVIQRCLEKCDLPQKSM--IMAELLQS--IHTMISDQFGNYVVQHV 733
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+A D ++ + +L K+ SNV
Sbjct: 734 VA----HDEGECRSHVLDIVMNNLEGYSKHKFASNV 765
>gi|167388005|ref|XP_001738397.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165898416|gb|EDR25278.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 389
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 13/292 (4%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
N D L+QDQ GS+ +Q + + + D +F + L + +V K E
Sbjct: 70 NEDYLRLSQDQTGSRTVQHKIETSITE-RDIIFDSIEKEAVTLSKDVFANYVIQKLFEFG 128
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + +I ++T F+ S+ +G V+K I+ V + + + ++
Sbjct: 129 VVWQKSQLIKRLTGS---FVELSLHMYGCRVVQKAIEFVDDIDKRT--IFNEIEDNIIAC 183
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ VI +C+E D I A L + H GC + ++ + +
Sbjct: 184 IQDQNGNHVIQKCVEKGDLKIIDSIIFAFKGRVLAFSQHPYGCRVIQRILEKIPTEKSYP 243
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L I N LS+ + GNYV+Q+++ + P + I AL+G+ LS+ K S V++K
Sbjct: 244 LLEEILPNTLDLSKDQYGNYVIQYIVE-KCPSERNKIRKALQGNIALLSMQKYSSNVIEK 302
Query: 251 CLKYQN--AVHYIIEELL----NSDQILQVANDKYGNYVIQTALAETMRQDR 296
C N I++E+ + +L + D+Y NYV+Q + +DR
Sbjct: 303 CFMCANLKGRQEILKEIYGIKKDGAPLLMMMRDQYANYVVQKIIENVSDEDR 354
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Query: 166 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLID 225
L+ H GC + I+ + ++ I + I N + + ++GN+V+Q + D +ID
Sbjct: 147 LSLHMYGCRVVQKAIEFVDDIDKRTIFNEIEDNIIACIQDQNGNHVIQKCVEKGDLKIID 206
Query: 226 AICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYV 283
+I FA +G + S G V+Q+ L+ + ++EE+L + L ++ D+YGNYV
Sbjct: 207 SIIFAFKGRVLAFSQHPYGCRVIQRILEKIPTEKSYPLLEEILPN--TLDLSKDQYGNYV 264
Query: 284 IQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
IQ + + S ++ LQ ++A L + KY SNV
Sbjct: 265 IQYIVEKCP-----SERNKIRKALQGNIALLSMQKYSSNV 299
>gi|344305475|gb|EGW35707.1| hypothetical protein SPAPADRAFT_58907 [Spathaspora passalidarum
NRRL Y-27907]
Length = 546
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 149/315 (47%), Gaps = 26/315 (8%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q+ L+S +F + +++LM+ +G +V K+ E + Q
Sbjct: 214 FTKDQYGSRFIQQKLNSSSDEEKATVFNEIKDISYDLMTDVFGNYVIQKYFEYGLKDQKE 273
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ K+ + ++ L S+ +G V++ ++ ++ LP L ++ LK + G
Sbjct: 274 FLLTKM--KGHIYEL-SLQMYGCRVVQRALESLS-LPGQL-AIIDELKDYILICAKDQNG 328
Query: 137 SSVILQCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ VI + +E P K FI + + L+ H GC + ++ +K IL
Sbjct: 329 NHVIQKSIEMIKPF--DKIRFILTSLSDQIYQLSIHPYGCRVIQRLLEFSNLDDQKDILE 386
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
++ L + + GNYV+QH+L + + I + G V S K S V++KC+K
Sbjct: 387 QLNRYIFYLIQDQYGNYVIQHILEHGNENERNEILKVVTGSVVTFSKHKFASNVIEKCIK 446
Query: 254 YQNAVH--YIIEELL--NSDQILQVAN----------DKYGNYVIQTALAETMRQDRLSV 299
+ + I++E++ N D +++ + D+Y NYVIQ L E +
Sbjct: 447 FGSTAQKRKILDEVMIGNEDFSMELVSDDSSLALMMKDQYANYVIQ-KLVEGF-DSKSPE 504
Query: 300 HQRLVTKLQQHLAAL 314
+RLV KL+Q+L +
Sbjct: 505 KKRLVLKLRQYLKQI 519
>gi|119628035|gb|EAX07630.1| pumilio homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1193
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 858 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 917
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 918 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 974
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 975 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1034
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1035 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1094
Query: 254 YQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1095 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 1148
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1149 HKIRPHIATLRKYTYGKHI 1167
>gi|448103094|ref|XP_004199945.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359381367|emb|CCE81826.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 152/316 (48%), Gaps = 35/316 (11%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q+ L + +F + FELM+ +G +V K+ E N+ Q
Sbjct: 475 FTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKYFEHGNDVQKE 534
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---T 133
+++ + ++ L S+ +G V++ ++ + ++ +S ++ L +++
Sbjct: 535 VLL--DCMKGHIYTL-SMQMYGCRVVQRALEAIK-----VHQQISIIEELKDHILVCAKD 586
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI + +E + F+ +A +L+ H GC + ++ +++IL
Sbjct: 587 QNGNHVIQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLLEYSSPDDQRKILD 646
Query: 194 LISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ L + + GNYV+QH+L S ED + I + G V+ S K S V++K
Sbjct: 647 ELNRFIFYLIQDQYGNYVMQHILERGSCED---REEILKVVLGSVVNFSKHKFASNVIEK 703
Query: 251 CLKYQN--AVHYIIEELL--NSDQILQVAN----------DKYGNYVIQTALAETMRQDR 296
C+KY + I++E++ N D ++V D+Y NYVIQ L E D
Sbjct: 704 CIKYGDFEQRKRILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQK-LVEGF--DA 760
Query: 297 LSVHQR-LVTKLQQHL 311
S ++ LV KL+Q+L
Sbjct: 761 QSEEKKILVVKLRQYL 776
>gi|109000868|ref|XP_001096289.1| PREDICTED: pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|114555200|ref|XP_001157067.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan troglodytes]
gi|397515865|ref|XP_003828162.1| PREDICTED: pumilio homolog 1 isoform 3 [Pan paniscus]
gi|355557757|gb|EHH14537.1| hypothetical protein EGK_00481 [Macaca mulatta]
Length = 1224
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1065
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1066 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1125
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1126 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 1179
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1180 HKIRPHIATLRKYTYGKHI 1198
>gi|119628037|gb|EAX07632.1| pumilio homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1224
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1065
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1066 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1125
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1126 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 1179
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1180 HKIRPHIATLRKYTYGKHI 1198
>gi|414869529|tpg|DAA48086.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 238
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E F+ A L+ H GC + +++ G+ + Q I+
Sbjct: 24 QNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCII 83
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I L++ + GNYV QHVL I L G V +S K S V++KC
Sbjct: 84 DEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCF 143
Query: 253 KYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
++ + + I+E+ ++ +L + D+Y NYV+Q L ET +D+ + L+++
Sbjct: 144 QHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQKIL-ETCNEDQREL---LLSR 199
Query: 307 LQQHLAALRVMKYGSNV 323
++ H+ ALR YG ++
Sbjct: 200 VKDHMQALRKYTYGKHI 216
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 183 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
M+ ++ ++H + + R ++GN+V+Q + I + A +G LS+
Sbjct: 1 MELDQKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHP 60
Query: 243 CGSFVVQKCLKY---QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
G V+Q+ L++ + II+E+L IL A D+YGNYV Q L +R
Sbjct: 61 YGCRVIQRILEHCGGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKA 112
Query: 300 HQR--LVTKLQQHLAALRVMKYGSNV 323
H+R ++TKL + + KY SNV
Sbjct: 113 HERSQIITKLAGQVVTMSQNKYASNV 138
>gi|355745080|gb|EHH49705.1| hypothetical protein EGM_00414 [Macaca fascicularis]
Length = 1224
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1065
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1066 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1125
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1126 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 1179
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1180 HKIRPHIATLRKYTYGKHI 1198
>gi|119628036|gb|EAX07631.1| pumilio homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1189
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 854 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 913
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 914 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 970
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 971 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1030
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1031 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1090
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1091 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 1144
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1145 HKIRPHIATLRKYTYGKHI 1163
>gi|74180360|dbj|BAE32346.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 759 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 818
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 819 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 872
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 873 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 926
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 927 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 986
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 987 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 1040
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1041 GQRKIVMHKIRPHIATLRKYTYGKHI 1066
>gi|66932909|ref|NP_001018494.1| pumilio homolog 1 isoform 1 [Homo sapiens]
gi|380784595|gb|AFE64173.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|383410799|gb|AFH28613.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|384943764|gb|AFI35487.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|410225218|gb|JAA09828.1| pumilio homolog 1 [Pan troglodytes]
gi|410266290|gb|JAA21111.1| pumilio homolog 1 [Pan troglodytes]
gi|410304038|gb|JAA30619.1| pumilio homolog 1 [Pan troglodytes]
gi|410350697|gb|JAA41952.1| pumilio homolog 1 [Pan troglodytes]
Length = 1188
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 969
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 970 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1029
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1030 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1089
Query: 254 YQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1090 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 1143
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1144 HKIRPHIATLRKYTYGKHI 1162
>gi|452821137|gb|EME28171.1| RNA-binding protein [Galdieria sulphuraria]
Length = 996
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 29/324 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q+ L + + L + L+ +G +V K +E +E+
Sbjct: 679 IAEFASDQHGSRFIQQKLEGANLEEIRSLVAELGPDIDRLVIDVFGNYVVQKLLEHGDEN 738
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
L+ K+ L S+ +G V+K ++V+ + L HV+ ++
Sbjct: 739 IRQLLTKKLEGH---MLSLSLHMYGCRVVQKALEVLKGNERTQLVQELDGHVLQCIR--- 792
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI +C+E FI + + LA H GC + +++
Sbjct: 793 -----DQNGNHVIQKCIELVEPENIVFIVDSVKGQAVALAEHAYGCRVVQRVLEHCPKEH 847
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+ +IL I A L R + GNYV+QH++ D I + V + K S V
Sbjct: 848 KAEILAEIMGCARDLIRDQYGNYVIQHIVEKGDADNKAVIMKVVLNEVVAFAQHKFASNV 907
Query: 248 VQKCLKYQNAVHYI--IEELL---NSDQILQVAN---DKYGNYVIQTALAETMRQDRLSV 299
V++CL+Y + V + IE L+ +S + ++N D++GNYV+Q L + +D L
Sbjct: 908 VERCLQYGSPVQRMDFIEVLVRGKDSAEDCPLSNLVKDQFGNYVVQRIL-DVANEDHL-- 964
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+R+V+ L++ + L+ YG ++
Sbjct: 965 -KRVVSILKEQIPYLKKYSYGKHI 987
>gi|109000894|ref|XP_001096958.1| PREDICTED: pumilio homolog 1 isoform 6 [Macaca mulatta]
Length = 1162
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 827 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 886
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 887 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 943
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 944 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1003
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1004 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1063
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1064 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 1117
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1118 HKIRPHIATLRKYTYGKHI 1136
>gi|62896769|dbj|BAD96325.1| pumilio homolog 1 variant [Homo sapiens]
Length = 1188
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 969
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 970 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1029
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1030 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1089
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1090 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 1143
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1144 HKIRPHIATLRKYTYGKHI 1162
>gi|194688530|gb|ACF78349.1| unknown [Zea mays]
gi|414869528|tpg|DAA48085.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 233
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E F+ A L+ H GC + +++ G+ + Q I+
Sbjct: 24 QNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCII 83
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I L++ + GNYV QHVL I L G V +S K S V++KC
Sbjct: 84 DEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCF 143
Query: 253 KYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
++ + + I+E+ ++ +L + D+Y NYV+Q L ET +D+ + L+++
Sbjct: 144 QHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQKIL-ETCNEDQREL---LLSR 199
Query: 307 LQQHLAALRVMKYGSNV 323
++ H+ ALR YG ++
Sbjct: 200 VKDHMQALRKYTYGKHI 216
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 183 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
M+ ++ ++H + + R ++GN+V+Q + I + A +G LS+
Sbjct: 1 MELDQKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHP 60
Query: 243 CGSFVVQKCLKY---QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
G V+Q+ L++ + II+E+L IL A D+YGNYV Q L +R
Sbjct: 61 YGCRVIQRILEHCGGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKA 112
Query: 300 HQR--LVTKLQQHLAALRVMKYGSNV 323
H+R ++TKL + + KY SNV
Sbjct: 113 HERSQIITKLAGQVVTMSQNKYASNV 138
>gi|410966648|ref|XP_003989842.1| PREDICTED: pumilio homolog 1 isoform 2 [Felis catus]
Length = 1224
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 143/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 949 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 1004
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 1005 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1064
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1065 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1124
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQRL 303
+ + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1125 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH--- 1180
Query: 304 VTKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1181 --KIRPHIATLRKYTYGKHI 1198
>gi|403293274|ref|XP_003937645.1| PREDICTED: pumilio homolog 1 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1224
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 949 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 1004
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 1005 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1064
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1065 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1124
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1125 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1178
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1179 MHKIRPHIATLRKYTYGKHI 1198
>gi|392577052|gb|EIW70182.1| hypothetical protein TREMEDRAFT_29689 [Tremella mesenterica DSM
1558]
Length = 337
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 27/282 (9%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + ++ + ++LM+ +G +V K E C++++ A +
Sbjct: 56 DQHGSRFIQQKLENATEAERRQILEELEPNVYQLMTDVFGNYVIQKLFEVCDQTEKAGLA 115
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIK---------VVAHLPPLLYHVMSALKRLFKFL 130
K+ L S+ +G V+K ++ +V L P H + +K
Sbjct: 116 KKMEGH---VLQLSMQMYGCRVVQKALEYVLTEQRDVLVEELRP---HTLECVKSSNANH 169
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
++ + L L+P DF+ +A + H L L H GC L +N+ R +
Sbjct: 170 VIHLRLTIERLITLDPP-----DFVTKAFVGHVLELGTHPYGCRVLQKTFENLPVERTRA 224
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
++ + ++ + + GNYVVQ ++ P + L ++S K S VV+K
Sbjct: 225 LIDEMHLHTVKFTMDQFGNYVVQSIIDKGIPEDRHKVIDKLLPQIQEMSRHKFASNVVEK 284
Query: 251 CLKY--QNAVHYIIEELL-----NSDQILQVANDKYGNYVIQ 285
L + +N II+E++ ++QI + D +GN+ +Q
Sbjct: 285 ALNHADENDRTAIIDEIIGPKPDGTNQIPSLLRDAFGNFAVQ 326
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 180 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
++N + R+QIL + N L GNYV+Q + + D + + GH + LS
Sbjct: 67 LENATEAERRQILEELEPNVYQLMTDVFGNYVIQKLFEVCDQTEKAGLAKKMEGHVLQLS 126
Query: 240 LTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALA 289
+ G VVQK L+Y ++EEL L+ N+VI L
Sbjct: 127 MQMYGCRVVQKALEYVLTEQRDVLVEEL--RPHTLECVKSSNANHVIHLRLT 176
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H L L+ GC + ++ + +R ++ + + + + N+V+ L++E
Sbjct: 121 HVLQLSMQMYGCRVVQKALEYVLTEQRDVLVEELRPHTLECVKSSNANHVIHLRLTIERL 180
Query: 222 FLIDAICF---ALRGHYVDLSLTKCGSFVVQKC---LKYQNAVHYIIEELLNSDQILQVA 275
+D F A GH ++L G V+QK L + I E L++ ++
Sbjct: 181 ITLDPPDFVTKAFVGHVLELGTHPYGCRVLQKTFENLPVERTRALIDEMHLHT---VKFT 237
Query: 276 NDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
D++GNYV+Q+ + + + +DR V +L+ ++Q+ + K+ SNV
Sbjct: 238 MDQFGNYVVQSIIDKGIPEDRHKVIDKLLPQIQE----MSRHKFASNV 281
>gi|227430382|ref|NP_001153075.1| pumilio homolog 1 isoform 2 [Mus musculus]
gi|29748037|gb|AAH50747.1| Pum1 protein [Mus musculus]
Length = 1186
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 912
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 913 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 966
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 967 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1020
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 1021 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1080
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1081 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 1134
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1135 GQRKIVMHKIRPHIATLRKYTYGKHI 1160
>gi|354472359|ref|XP_003498407.1| PREDICTED: pumilio homolog 1 isoform 1 [Cricetulus griseus]
Length = 1185
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 852 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 911
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 912 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 965
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 966 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1019
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 1020 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1079
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1080 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 1133
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1134 GQRKIVMHKIRPHIATLRKYTYGKHI 1159
>gi|395526792|ref|XP_003765540.1| PREDICTED: pumilio homolog 1 isoform 1 [Sarcophilus harrisii]
Length = 1188
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 38/328 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 855 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 914
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---------LLYHVMSALK 124
Q + +I L ++ +G ++K ++ + PP L HV+ +K
Sbjct: 915 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK 968
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 969 --------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCL 1020
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K
Sbjct: 1021 PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFA 1080
Query: 245 SFVVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQD 295
S VV+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q
Sbjct: 1081 SNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QR 1139
Query: 296 RLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ +H K++ H+A LR YG ++
Sbjct: 1140 KIVMH-----KIRPHIATLRKYTYGKHI 1162
>gi|73950042|ref|XP_852168.1| PREDICTED: pumilio homolog 1 isoform 2 [Canis lupus familiaris]
Length = 1224
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 889 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 948
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 1005
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 1006 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1065
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1066 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1125
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1126 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH---- 1180
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1181 -KIRPHIATLRKYTYGKHI 1198
>gi|348571012|ref|XP_003471290.1| PREDICTED: pumilio homolog 1-like isoform 1 [Cavia porcellus]
Length = 1186
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 912
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 913 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 966
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 967 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1020
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 1021 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1080
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1081 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 1134
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1135 GQRKIVMHKIRPHIATLRKYTYGKHI 1160
>gi|291399423|ref|XP_002716108.1| PREDICTED: pumilio 1-like isoform 1 [Oryctolagus cuniculus]
Length = 1186
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 912
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 913 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPADQQNEMVRELDGHVLKCVK-- 966
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 967 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1020
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 1021 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1080
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1081 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 1134
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1135 GQRKIVMHKIRPHIATLRKYTYGKHI 1160
>gi|25150422|ref|NP_508980.2| Protein PUF-9 [Caenorhabditis elegans]
gi|351061611|emb|CCD69461.1| Protein PUF-9 [Caenorhabditis elegans]
Length = 703
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 145/324 (44%), Gaps = 21/324 (6%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+++ A+DQ GS+++Q+ L R +F V ELM+ +G +V KF E N
Sbjct: 345 NNVIEFAKDQHGSRFIQQKLERASLRDKAAIFTPVLENAEELMTDVFGNYVIQKFFEFGN 404
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
Q ++ T + + LA + +G ++K ++ V + ++ ++ +
Sbjct: 405 NEQRNQLVG--TIRGNVMKLA-LQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCV 459
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQA----ALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI + +E + FI A ++ L+ H GC + ++ +
Sbjct: 460 KDQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNEEQ 519
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAIC-FALRGHYVDLSLTKCGSF 246
++ +L + ++ L + GNYV+QHV+ P + I + + + K S
Sbjct: 520 KQPVLDALQIHLKQLVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISDDLLKFAQHKFASN 579
Query: 247 VVQKCLKYQNAV--HYIIEELLN-----SDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
V++KCL + + II+++ S +LQ+ D + NYV+Q L Q R
Sbjct: 580 VIEKCLTFGGHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHR--- 636
Query: 300 HQRLVTKLQQHLAALRVMKYGSNV 323
+++ ++ H+A LR +G ++
Sbjct: 637 -KKITLTIKPHIATLRKYNFGKHI 659
>gi|281353340|gb|EFB28924.1| hypothetical protein PANDA_013254 [Ailuropoda melanoleuca]
Length = 1193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 858 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 917
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 918 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 974
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 975 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1034
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1035 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1094
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1095 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH---- 1149
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1150 -KIRPHIATLRKYTYGKHI 1167
>gi|190345122|gb|EDK36946.2| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 38/300 (12%)
Query: 14 LFSLAQDQEGSQYLQENL-----SSGDSRI--LDKLFWVVSGFTFELMSGQYGRFVFGKF 66
+ SLA+DQ G ++LQ+ + S+ R D +F VS +EL+ +G ++ K
Sbjct: 109 ILSLAKDQYGCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFGNYLVQKL 168
Query: 67 IESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRL 126
I C+E + LI+ +++ LF + S+++ G+ +++K+I V++ L +++ L
Sbjct: 169 IAYCSEQNITLILESLSY--NLFQI-SINQHGTRALQKIIDAVSNKYQLTL-IVNGLSPY 224
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
L+ G+ VI + L FIY + ++ L +A H+ GC L ++++
Sbjct: 225 IIELIKDLNGNHVIQKILNKYPADDCQFIYDSIIKDLLVVATHKHGCCVLQKCLNHVTTE 284
Query: 187 RRKQILHLISVNA--ASLSRHRSGNYVVQHVLSLEDPFLIDAICFA--LRGHYVDLSLTK 242
+ Q I L + GNYV+Q+++S+ I+ F +R +L K
Sbjct: 285 QLSQFSARILTFEIFIKLINDQFGNYVLQYLISINS-LPINRAVFNNFVRFGVSNLCKLK 343
Query: 243 CGSFVVQK----------------CLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQT 286
S VV+K CLKY +I +L ++ ND YGNYV+QT
Sbjct: 344 FSSNVVEKFLKNCFNNEPISDAFSCLKYDLCYQILISDL------NKMINDPYGNYVVQT 397
>gi|440896924|gb|ELR48715.1| Pumilio-like protein 1, partial [Bos grunniens mutus]
Length = 1192
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 857 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 916
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 917 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 973
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 974 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1033
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1034 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1093
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1094 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH---- 1148
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1149 -KIRPHIATLRKYTYGKHI 1166
>gi|327286697|ref|XP_003228066.1| PREDICTED: pumilio homolog 1-like isoform 1 [Anolis carolinensis]
Length = 1184
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 38/328 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 851 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 910
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---------LLYHVMSALK 124
Q + +I L ++ +G ++K ++ + PP L HV+ +K
Sbjct: 911 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK 964
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 965 --------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCL 1016
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K
Sbjct: 1017 PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFA 1076
Query: 245 SFVVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQD 295
S VV+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q
Sbjct: 1077 SNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QR 1135
Query: 296 RLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ +H K++ H+A LR YG ++
Sbjct: 1136 KIVMH-----KIRPHIATLRKYTYGKHI 1158
>gi|126330276|ref|XP_001367437.1| PREDICTED: pumilio homolog 1 isoform 1 [Monodelphis domestica]
Length = 1188
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 38/328 (11%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 855 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 914
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---------LLYHVMSALK 124
Q + +I L ++ +G ++K ++ + PP L HV+ +K
Sbjct: 915 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK 968
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 969 --------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCL 1020
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCG 244
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K
Sbjct: 1021 PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFA 1080
Query: 245 SFVVQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQD 295
S VV+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q
Sbjct: 1081 SNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QR 1139
Query: 296 RLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ +H K++ H+A LR YG ++
Sbjct: 1140 KIVMH-----KIRPHIATLRKYTYGKHI 1162
>gi|384502000|gb|EIE92491.1| hypothetical protein RO3G_17013 [Rhizopus delemar RA 99-880]
Length = 259
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 58 YGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLY 117
+G + K ++ C + Q I+ IT A+++ G+ +V++LI+ ++ P +
Sbjct: 8 FGNYFCQKLLDKCTDEQRTRIV-HIT--SPHLAQAALNIHGTRAVQRLIETIS-TPEQID 63
Query: 118 HVMSALKRLFKFLMMTKPGSSVILQCLEP-SYNHKNDFIYQAALEHCLYLACHEQGCINL 176
V+ AL L+ G+ VI +CL S KN FIY A +C+ +A H+ GC L
Sbjct: 64 SVIHALNPSVTALIKNLNGNHVIQKCLHYLSKEEKNQFIYDAICTNCVEVASHKHGCCVL 123
Query: 177 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYV 236
D ++ Q++ IS +A L + GNYVVQ+VL L + I GH
Sbjct: 124 QRCFDYATFKQKDQLVKEISKHALVLVQGPFGNYVVQYVLDLGLVTYSENINQKFLGHIC 183
Query: 237 DLSLTKCGSFVVQK 250
LS K S V++K
Sbjct: 184 SLSSQKFSSNVIEK 197
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 179 FIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVL-SLEDPFLIDAICFALRGHYVD 237
+D +R +I+H+ S + A + + G VQ ++ ++ P ID++ AL
Sbjct: 16 LLDKCTDEQRTRIVHITSPHLAQAALNIHGTRAVQRLIETISTPEQIDSVIHALNPSVTA 75
Query: 238 LSLTKCGSFVVQKCLKYQNAVHYIIEELLNS---DQI----LQVANDKYGNYVIQTALA- 289
L G+ V+QKCL HY+ +E N D I ++VA+ K+G V+Q
Sbjct: 76 LIKNLNGNHVIQKCL------HYLSKEEKNQFIYDAICTNCVEVASHKHGCCVLQRCFDY 129
Query: 290 ETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYKW 326
T +Q +LV ++ +H L +G+ V ++
Sbjct: 130 ATFKQK-----DQLVKEISKHALVLVQGPFGNYVVQY 161
>gi|294655796|ref|XP_457992.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
gi|199430612|emb|CAG86050.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
Length = 820
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 148/316 (46%), Gaps = 29/316 (9%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q+ L + +F + +++LM+ +G +V K+ E S +
Sbjct: 485 FTKDQHGSRFIQQKLPESSDEEKEVIFNEIRDISYDLMTDVFGNYVIQKYFEHG--SPIQ 542
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---T 133
IL ++ L S+ FG V++ ++ + L + ++ L ++++
Sbjct: 543 KKILLDCMIGHIYEL-SLQTFGCRVVQRALEAID-----LDGQIQIIEELKDYILVCAKD 596
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI + +E + +F+ ++ +L+ H GC + +++ RK+IL
Sbjct: 597 QNGNHVIQKSIETIPFDRIEFVLESLDNQIYHLSTHPYGCRVIQRLLEHSDAEDRKKILG 656
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
++ L + + GNYV+QH L +P + I + G V+ S K S V++KC+K
Sbjct: 657 ELNRFIFYLIQDQYGNYVMQHTLERGNPEDREEILKIVLGSVVNFSKHKFASNVIEKCIK 716
Query: 254 Y------QNAVH--------YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
+ + +H Y +E + + + + D+Y NYVIQ L E D S
Sbjct: 717 FGTLDQRRRILHEVMIGNEDYNVETVSDDSALALMMKDQYANYVIQ-KLVEGF--DAKSD 773
Query: 300 HQR-LVTKLQQHLAAL 314
++ LV KL+Q+L +
Sbjct: 774 EKKILVVKLRQYLKQI 789
>gi|350538385|ref|NP_001233239.1| Pumilio2 [Xenopus laevis]
gi|313661062|dbj|BAJ41096.1| Pumilio2 [Xenopus laevis]
Length = 1173
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 143/325 (44%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 840 IVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMD 899
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 900 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISTDQQSEMVRELDGHVLKCVK--- 953
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI +A L+ H GC + +++ +
Sbjct: 954 -----DQNGNHVVQKCIECVTPQSLHFIIEAFKGQVYVLSTHPYGCRVIQRILEHCTPEQ 1008
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL I +RG + LS K S V
Sbjct: 1009 TLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVCEVRGQVLVLSQHKFASNV 1068
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + ++I+E+ + A D+Y NYV+Q + D
Sbjct: 1069 VEKCVTHSSRTERAFLIDEICCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPA 1122
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1123 QRKIIMHKIRPHITTLRKYTYGKHI 1147
>gi|448099238|ref|XP_004199094.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359380516|emb|CCE82757.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 29/316 (9%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q+ L + +F + FELM+ +G +V K+ E N+ Q
Sbjct: 475 FTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKYFEHGNDVQKE 534
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+++ + ++ L S+ +G V++ ++ + +L ++ LK + G
Sbjct: 535 VLL--DCMKGHIYTL-SMQMYGCRVVQRALEAIKVHQQIL--IIEELKDHILVCAKDQNG 589
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E + F+ +A +L+ H GC + ++ +++IL+ ++
Sbjct: 590 NHVIQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLLEFSSPDDQRKILNELN 649
Query: 197 VNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
L + + GNYV+QH+L S ED + I + G V+ S K S V++KC+K
Sbjct: 650 RFIFYLIQDQYGNYVMQHILERGSYED---REEILKVVLGSVVNFSKHKFASNVIEKCIK 706
Query: 254 YQN--AVHYIIEELL--NSDQILQVAN----------DKYGNYVIQTALAETMRQDRLSV 299
Y + I++E++ N D ++V D+Y NYVIQ L E D S
Sbjct: 707 YGDFEQRKRILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQK-LVEGF--DAQSE 763
Query: 300 HQR-LVTKLQQHLAAL 314
++ LV KL+Q+L +
Sbjct: 764 EKKILVVKLRQYLKQI 779
>gi|121703716|ref|XP_001270122.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
gi|119398266|gb|EAW08696.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
Length = 908
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 146/323 (45%), Gaps = 23/323 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S +++F + +LM+ +G +V K E
Sbjct: 492 NH-IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 550
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 551 NQSQKKILANQMKGH---VLALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 602
Query: 131 M---MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E + FI A LA H GC + +++ +
Sbjct: 603 LKCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCEEED 662
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
R+ IL + L + GNYV+QHV+ + + + + S K S V
Sbjct: 663 RESILAELHACTTHLIPDQFGNYVIQHVIENGEEKDRSRMITIVLSQLLVYSKHKFASNV 722
Query: 248 VQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVH 300
V+K +++ ++ II L + + +L + D+YGNYVIQ L + ++R
Sbjct: 723 VEKSIEFGEESQRRQIISTLTSPNDRGESPLLGLMRDQYGNYVIQKVLGQLKGEER---- 778
Query: 301 QRLVTKLQQHLAALRVMKYGSNV 323
+ L+ +++ L+ L+ YG +
Sbjct: 779 EGLIEQIRPLLSQLKKFSYGKQI 801
>gi|389748876|gb|EIM90053.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 400
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 150/323 (46%), Gaps = 28/323 (8%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 78
DQ GS+++Q+ L S S +F +V L+ +G +V K E + +Q+
Sbjct: 50 DQHGSRFIQQKLESASSEEKQFVFDEIVPSNALALIQDVFGNYVIQKLFE--HGTQVQKT 107
Query: 79 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSS 138
+L + + + L S+ +G V+K ++ + LP + L+ + G+
Sbjct: 108 VLATSMETHILSL-SLQMYGCRVVQKAVEYI--LPEQQSIFVKELEPHVLRCVKDANGNH 164
Query: 139 VILQCLEPSYNHKNDFI--YQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
VI + +E + F+ +Q H L+ H GC L +++ + + +L +
Sbjct: 165 VIQKLIERVAPERLGFVPSFQG---HVWELSTHPYGCRVLQRCFEHLAEDQTRPLLEELH 221
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN 256
+ +L + + GNYV+Q+VL P + I LRG + +S K S V +K L +
Sbjct: 222 KHTRNLMQDQFGNYVIQYVLEHGKPQDRNLIINQLRGQMMAMSRHKFASNVCEKALVTAD 281
Query: 257 AV--HYIIEELL-----NSDQILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLVTKL 307
+ +I+E++ + I+ + D+Y NYV+Q A+ AE ++D L++K+
Sbjct: 282 SASRRQLIDEIMVPRHDGASPIITMMKDQYANYVLQRAMVVAEGDQRD------ELLSKV 335
Query: 308 QQHLAALRVMKYGSNVYKWTTAS 330
+ L ++R +Y + K T+S
Sbjct: 336 RPQLNSMR--RYSTAYSKHLTSS 356
>gi|451995215|gb|EMD87684.1| hypothetical protein COCHEDRAFT_1034063 [Cochliobolus
heterostrophus C5]
Length = 889
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 28/297 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q+ L + +S + + +F + +LM +G +V KF E +++
Sbjct: 510 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQT 569
Query: 74 QLALIILKIT-----FQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFK 128
Q +++ K+ +Q++ + + + K + H L S +K L K
Sbjct: 570 QKKILVGKMKGHVLELANQMY-----------ACRVVQKALEHA--LTEQQASMVKELEK 616
Query: 129 FLMMT---KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
++ T + G+ VI + ++ H I +A + L+ + GC + ++ ++
Sbjct: 617 DVLKTVKDQNGNHVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVEE 676
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+R+ IL + L + GNYV QHV+ P I ++ ++ S K S
Sbjct: 677 PQRRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHKFAS 736
Query: 246 FVVQKCL------KYQNAVHYIIEELLNSD-QILQVANDKYGNYVIQTALAETMRQD 295
VV++CL + + V ++ + + ++ + D YGNYVIQ L R D
Sbjct: 737 NVVERCLICSDDAQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQKLLDTLTRDD 793
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + A + G + ++ ++ + + NA L + GNYV+Q D
Sbjct: 509 HVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQ 568
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY----QNAVHYIIEELLNSDQILQVAND 277
+ ++GH ++L+ VVQK L++ Q A +++EL +L+ D
Sbjct: 569 TQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQA--SMVKEL--EKDVLKTVKD 624
Query: 278 KYGNYVIQTALAETMRQDRLSVH--QRLVTKLQQHLAALRVMKYGSNV 323
+ GN+VIQ + DR+ +H Q++V + ++ L V YG V
Sbjct: 625 QNGNHVIQKVI------DRVPMHHIQKIVEAFRGNVGVLSVNSYGCRV 666
>gi|170596494|ref|XP_001902784.1| RE63138p [Brugia malayi]
gi|158589322|gb|EDP28367.1| RE63138p, putative [Brugia malayi]
Length = 572
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 35/329 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ AQDQ GS+++Q+ L + +F V+ LM+ +G +V KF E
Sbjct: 259 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTNE 318
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q IL + + LA + +G ++K ++ + P ++ ++ +
Sbjct: 319 QKN--ILTNAVKGNVMSLA-LQMYGCRVIQKALESIE--PEQQMEILKEMEGQVLKCVKD 373
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEH-----CLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ + +E + FI A + L+ H GC + +++ ++
Sbjct: 374 QNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDDQK 433
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ +L + + SL + GNYV+QHV+ SLED D I ++G + + K S
Sbjct: 434 RPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLED---RDRIVNQVKGDVLRFAQHKFAS 490
Query: 246 FVVQKCLK-----YQNAVHYIIEELLNSDQI----LQVANDKYGNYVIQTAL--AETMRQ 294
V++KCL ++NA+ I E N + I L + D++ NYV+Q L A++
Sbjct: 491 NVIEKCLTCGEPHHKNAL--ITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVADS--- 545
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ ++++ ++ H+ ALR YG ++
Sbjct: 546 ---ALRKKMMLAIKPHIPALRKYNYGKHI 571
>gi|148698189|gb|EDL30136.1| pumilio 1 (Drosophila), isoform CRA_c [Mus musculus]
Length = 1215
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNE 72
+ +QDQ GS+++Q L + +F + ++LM +G +V KF E +E
Sbjct: 882 IMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHE 941
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 942 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 995
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 996 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1049
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 1050 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1109
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSV 299
VV+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1110 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEP 1163
Query: 300 HQRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1164 GQRKIVMHKIRPHIATLRKYTYGKHI 1189
>gi|67475695|ref|XP_653533.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470496|gb|EAL48147.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704716|gb|EMD44904.1| pumilio family RNA-binding protein, putative [Entamoeba histolytica
KU27]
Length = 484
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 149/320 (46%), Gaps = 25/320 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
+H + L +DQ+GS+ +Q+ L + +++LF + +FELM+ +G +V K IE
Sbjct: 165 SHTVADLCKDQQGSRRIQQFLDTAQPNEIEELFEFIIKDSFELMTDLFGNYVIQKLIE-- 222
Query: 71 NESQLALIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
I K F + + + S+ +G ++K + ++ L + +K
Sbjct: 223 ----YGTIEHKHQFMEIIKGHVVELSLHTYGCRVIQKACEFISG--EELGIIAEEIKGHI 276
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + G+ VI + +E + + I + + + H GC + I+ +
Sbjct: 277 VEFVEDQNGNHVIQKFIEFMPSTYSSLIANEISGYIISFSKHAYGCRVVQKLIERKEPLI 336
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+ I + N L+ ++ GNYV+QH+L + + + ++G + + S+ K S V
Sbjct: 337 QNVITSELKNNIWDLAVNQYGNYVIQHLLENGNQQQHNLVISEMKGKFCEYSMKKYSSNV 396
Query: 248 VQKCL------KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLS--V 299
V+KC+ + N + I + N + +L++ D Y NYVIQT L E M D+ S +
Sbjct: 397 VEKCVHCCTSAQRDNFIDEICSKKDN-EMLLKLMKDPYANYVIQT-LVEVMDDDQRSKFI 454
Query: 300 HQRLVTKLQQHLAALRVMKY 319
Q ++ ++++LR + Y
Sbjct: 455 EQNILP----NVSSLRRVSY 470
>gi|156064143|ref|XP_001597993.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980]
gi|154690941|gb|EDN90679.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 964
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +S ++LF + +LM+ +G +V K E N Q+ +
Sbjct: 570 DQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGN--QVQKRV 627
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
L ++ + L S+ +G V+K ++ V L +K L ++ + G
Sbjct: 628 LAEQMKNHVMEL-SMQMYGCRVVQKALEHV-----LADQQAELVKELEADVLKCVKDQNG 681
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ + +E FI +A LA H GC + ++ + ++++L +
Sbjct: 682 NHVVQKAIERVPTEHIQFIIEAFRGQVHILATHPYGCRVIQRILEYCQPRDQERVLEELH 741
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-- 254
A++L + GNYV QHV+ P I + + LS K S VV+K +++
Sbjct: 742 QCASNLITDQYGNYVTQHVIQHGKPEDRAKIIKIVTAQLLTLSKHKFASNVVEKSIQFGT 801
Query: 255 QNAVHYIIEEL--LNSDQI--LQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
H I+ L L+SD LQ + D+YGNYVIQ L + +R + V L+
Sbjct: 802 DEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKGAERAA----FVEDLKP 857
Query: 310 HLAALRVMKYGSNV 323
L AL+ YG +
Sbjct: 858 QLLALKKYNYGKQI 871
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 155 IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQH 214
IYQ H + + + G + ++ ++Q+ I NA L GNYV+Q
Sbjct: 560 IYQ----HVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQK 615
Query: 215 VLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQIL 272
+ + + ++ H ++LS+ G VVQK L++ + +++EL +L
Sbjct: 616 LFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKEL--EADVL 673
Query: 273 QVANDKYGNYVIQTAL 288
+ D+ GN+V+Q A+
Sbjct: 674 KCVKDQNGNHVVQKAI 689
>gi|218202388|gb|EEC84815.1| hypothetical protein OsI_31896 [Oryza sativa Indica Group]
Length = 988
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 26/318 (8%)
Query: 18 AQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 77
+ DQ GS+++Q+ L + D LF V ELM+ +G +V KF E + Q
Sbjct: 660 SSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKRE 719
Query: 78 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TK 134
I K+ +F L S+ +G ++K ++V+ L + + L ++ +
Sbjct: 720 IANKLA--GHVFSL-SLQMYGCRVIQKALEVID-----LEQKIVLVGELDGHVLRCVHDQ 771
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 194
G+ VI +C+E F+ + L+ H GC + ++ + S + L +
Sbjct: 772 NGNHVIQKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRILE--RCSNNSECLCI 829
Query: 195 ISV---NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
I +A L++ + GNYVVQHVL + I L G V +S K S V+++C
Sbjct: 830 IDEILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIERC 889
Query: 252 LKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
++ + V I+++ ++ +L + D+Y NYV+Q L Q + + L++
Sbjct: 890 FEHGGSAERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTCNEQHK----EILLS 945
Query: 306 KLQQHLAALRVMKYGSNV 323
+++ HL L+ Y ++
Sbjct: 946 RVKIHLPLLKKYTYAKHI 963
>gi|350636136|gb|EHA24496.1| translation repression protein [Aspergillus niger ATCC 1015]
Length = 894
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +S +++F + + +LM+ +G +V K E N++
Sbjct: 479 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQT 538
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
Q ++ ++ L S +G V+K ++ + L S +K L ++
Sbjct: 539 QKKILANQMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLRC 590
Query: 132 -MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + +E + FI A LA H GC + +++ + R+
Sbjct: 591 VRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDRES 650
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + GNYV+QHV+ + + + + S K S VV+K
Sbjct: 651 ILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEK 710
Query: 251 CLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
++Y ++ +I L + ++ ++ + D+YGNYVIQ L + D L
Sbjct: 711 SIEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILGQL--DDTSEEKYSL 768
Query: 304 VTKLQQHLAALRVMKYGSNV 323
++Q L L+ YG +
Sbjct: 769 AVRIQPMLDQLKKFSYGKQI 788
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ ++Q+ I N+ L GNYVVQ + +
Sbjct: 478 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQ 537
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKY 279
+ ++GH + LS G VVQK L++ + +++EL N +L+ D+
Sbjct: 538 TQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLRCVRDQN 595
Query: 280 GNYVIQTALAETMRQ-------------DRLSVHQ---RLVTKLQQH 310
GN+VIQ A+ Q +RL+ H R++ ++ +H
Sbjct: 596 GNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEH 642
>gi|317035324|ref|XP_001396658.2| mRNA binding protein Pumilio 2 [Aspergillus niger CBS 513.88]
Length = 912
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +S +++F + + +LM+ +G +V K E N++
Sbjct: 497 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQT 556
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
Q ++ ++ L S +G V+K ++ + L S +K L ++
Sbjct: 557 QKKILANQMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLRC 608
Query: 132 -MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + +E + FI A LA H GC + +++ + R+
Sbjct: 609 VRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDRES 668
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + GNYV+QHV+ + + + + S K S VV+K
Sbjct: 669 ILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEK 728
Query: 251 CLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
++Y ++ +I L + ++ ++ + D+YGNYVIQ L + D L
Sbjct: 729 SIEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILGQL--DDTSEEKYSL 786
Query: 304 VTKLQQHLAALRVMKYGSNV 323
++Q L L+ YG +
Sbjct: 787 AVRIQPMLDQLKKFSYGKQI 806
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ ++Q+ I N+ L GNYVVQ + +
Sbjct: 496 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQ 555
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKY 279
+ ++GH + LS G VVQK L++ + +++EL N +L+ D+
Sbjct: 556 TQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLRCVRDQN 613
Query: 280 GNYVIQTALAETMRQ-------------DRLSVHQ---RLVTKLQQH 310
GN+VIQ A+ Q +RL+ H R++ ++ +H
Sbjct: 614 GNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEH 660
>gi|115479929|ref|NP_001063558.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|113631791|dbj|BAF25472.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|215678529|dbj|BAG92184.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641849|gb|EEE69981.1| hypothetical protein OsJ_29881 [Oryza sativa Japonica Group]
Length = 988
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 26/318 (8%)
Query: 18 AQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 77
+ DQ GS+++Q+ L + D LF V ELM+ +G +V KF E + Q
Sbjct: 660 SSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKRE 719
Query: 78 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TK 134
I K+ +F L S+ +G ++K ++V+ L + + L ++ +
Sbjct: 720 IANKLA--GHVFSL-SLQMYGCRVIQKALEVID-----LEQKIVLVGELDGHVLRCVHDQ 771
Query: 135 PGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 194
G+ VI +C+E F+ + L+ H GC + ++ + S + L +
Sbjct: 772 NGNHVIQKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRILE--RCSNNSECLCI 829
Query: 195 ISV---NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
I +A L++ + GNYVVQHVL + I L G V +S K S V+++C
Sbjct: 830 IDEILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIERC 889
Query: 252 LKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
++ + V I+++ ++ +L + D+Y NYV+Q L Q + + L++
Sbjct: 890 FEHGGSAERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTCNEQHK----EILLS 945
Query: 306 KLQQHLAALRVMKYGSNV 323
+++ HL L+ Y ++
Sbjct: 946 RVKIHLPLLKKYTYAKHI 963
>gi|134082176|emb|CAK42288.1| unnamed protein product [Aspergillus niger]
Length = 950
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +S +++F + + +LM+ +G +V K E N++
Sbjct: 535 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQT 594
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
Q ++ ++ L S +G V+K ++ + L S +K L ++
Sbjct: 595 QKKILANQMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLRC 646
Query: 132 -MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + +E + FI A LA H GC + +++ + R+
Sbjct: 647 VRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDRES 706
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + GNYV+QHV+ + + + + S K S VV+K
Sbjct: 707 ILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEK 766
Query: 251 CLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
++Y ++ +I L + ++ ++ + D+YGNYVIQ L + D L
Sbjct: 767 SIEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILGQL--DDTSEEKYSL 824
Query: 304 VTKLQQHLAALRVMKYGSNV 323
++Q L L+ YG +
Sbjct: 825 AVRIQPMLDQLKKFSYGKQI 844
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ ++Q+ I N+ L GNYVVQ + +
Sbjct: 534 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQ 593
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKY 279
+ ++GH + LS G VVQK L++ + +++EL N +L+ D+
Sbjct: 594 TQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLRCVRDQN 651
Query: 280 GNYVIQTALAETMRQ-------------DRLSVHQ---RLVTKLQQH 310
GN+VIQ A+ Q +RL+ H R++ ++ +H
Sbjct: 652 GNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEH 698
>gi|312075892|ref|XP_003140618.1| hypothetical protein LOAG_05033 [Loa loa]
Length = 607
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 35/329 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ AQDQ GS+++Q+ L + +F V+ LM+ +G +V KF E
Sbjct: 264 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTTE 323
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q IL + + LA + +G ++K ++ + P ++ ++ +
Sbjct: 324 QKN--ILTNAVKGNVMSLA-LQMYGCRVIQKALESIE--PKQQMEILKEMEGQVLKCVKD 378
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALE-----HCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ + +E + FI A + L+ H GC + +++ ++
Sbjct: 379 QNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDEQK 438
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ +L + + SL + GNYV+QHV+ SLED D I ++G + + K S
Sbjct: 439 RPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLED---RDRIVNQVKGDVLHFAQHKFAS 495
Query: 246 FVVQKCLK-----YQNAVHYIIEELLNSDQI----LQVANDKYGNYVIQTAL--AETMRQ 294
V++KCL ++NA+ I E N + I L + D++ NYV+Q L A++
Sbjct: 496 NVIEKCLTCGEPHHKNAL--ITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVADS--- 550
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ ++++ ++ H+ ALR YG ++
Sbjct: 551 ---ALRKKMMLAIKPHIPALRKYNYGKHI 576
>gi|324503008|gb|ADY41314.1| Maternal protein pumilio [Ascaris suum]
Length = 736
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 151/331 (45%), Gaps = 33/331 (9%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + AQDQ GS+++Q+ L + +F V+ LM+ +G +V KF E
Sbjct: 390 NH-VVEFAQDQHGSRFIQQKLERASVKEKQAVFEEVAAHAQSLMTDVFGNYVIQKFFEYG 448
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
Q + I + + LA + +G ++K ++ + P ++ ++
Sbjct: 449 TPEQKNQLTSAI--KGNVMNLA-LQMYGCRVIQKALESIE--PNQQMEILKEMEGQVLKC 503
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEH-----CLYLACHEQGCINLNNFIDNMKG 185
+ + G+ V+ + +E + FI A ++ L+ H GC + +++
Sbjct: 504 VKDQNGNHVVQKVIERVDPSRLQFIIDAFVQPGDNLTVCNLSTHPYGCRVIQRVLEHCTE 563
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTK 242
+++ +L + ++ +L + GNYV+QHV+ S+ED D I ++G + + K
Sbjct: 564 EQKRPVLDQLHMHIKTLVVDQYGNYVIQHVIEHGSMED---RDRIVNQIKGDVLRFAQHK 620
Query: 243 CGSFVVQKCLK-----YQNAVHYIIEELLNSD-----QILQVANDKYGNYVIQTALAETM 292
S V++KCL ++NA+ I E N + +L + D++ NYV+Q L
Sbjct: 621 FASNVIEKCLTCGAPHHKNAL--ITEVCGNPNDTTATPLLMMMKDQFANYVVQKMLDVAD 678
Query: 293 RQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
R ++++ ++ H+ ALR YG ++
Sbjct: 679 SAHR----KKMMLAIKPHIPALRKYNYGKHI 705
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 149 NHKNDFIYQAAL-EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRS 207
N++N + + L H + A + G + ++ ++ + ++ +A SL
Sbjct: 377 NNRNPHLQLSDLGNHVVEFAQDQHGSRFIQQKLERASVKEKQAVFEEVAAHAQSLMTDVF 436
Query: 208 GNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEEL 265
GNYV+Q P + + A++G+ ++L+L G V+QK L+ N I++E+
Sbjct: 437 GNYVIQKFFEYGTPEQKNQLTSAIKGNVMNLALQMYGCRVIQKALESIEPNQQMEILKEM 496
Query: 266 LNSDQILQVANDKYGNYVIQTALAETMRQDRL 297
Q+L+ D+ GN+V+Q + E + RL
Sbjct: 497 --EGQVLKCVKDQNGNHVVQKVI-ERVDPSRL 525
>gi|340056635|emb|CCC50971.1| RNA-binding regulatory protein (fragment) [Trypanosoma vivax Y486]
Length = 540
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 45/322 (13%)
Query: 9 CTNHDLFSLAQDQEGSQYLQENL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKF 66
C ++ A+DQ G ++LQ L S G+S + + + ELM+ QY F+ K
Sbjct: 194 CLRGAVYETAKDQHGCRHLQRLLGDSDGNSEVARVIMNEIVPHVAELMTDQYANFLVQKL 253
Query: 67 IESCNESQLALIILKITFQDQLFLLAS-------VDKFGSSSVKKLIKVVAHLPPLLYHV 119
+ I+ + ++ +A+ + G+ SV+K+I+ ++ + +
Sbjct: 254 FD----------IMPPDVRYKVAYVAAPKIADIALTPHGTFSVQKMIETISTREEMEI-I 302
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNN 178
AL R L+ G+ I + L+ ++H++ +FIY A C+ +A ++QGC L
Sbjct: 303 REALSRDVVRLVKDANGNHAIQKVLQ-RFDHEDKEFIYAAVGADCVPIAKNKQGCCVLQR 361
Query: 179 FIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDL 238
++ ++R ++ I ++ GNYV+Q+VL + ID I A H L
Sbjct: 362 CLEYASPTQRSTLVKHILDCCLQIAEDPYGNYVLQYVLQSGNNTTIDTIAIAFLPH---L 418
Query: 239 SLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLS 298
L + +E + + ++ D +GNYV+QTAL + +
Sbjct: 419 PLVR----------------EMYVETMCTPEVAARLIQDDFGNYVLQTALTRST----PA 458
Query: 299 VHQRLVTKLQQHLAALRVMKYG 320
+ LV L+ + +R Y
Sbjct: 459 QAEALVAVLRPLMPTIRSTPYA 480
>gi|355714560|gb|AES05044.1| pumilio-like protein 1 [Mustela putorius furo]
Length = 1208
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 874 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 933
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 934 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 990
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + +L
Sbjct: 991 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPVLE 1050
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1051 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1110
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLSVHQRLV 304
+ + +I+E+ + A D+Y NYV+Q + AE Q ++ +H
Sbjct: 1111 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH---- 1165
Query: 305 TKLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1166 -KIRPHIATLRKYTYGKHI 1183
>gi|414885203|tpg|DAA61217.1| TPA: hypothetical protein ZEAMMB73_669990 [Zea mays]
Length = 484
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 154 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 213
FI +A ++C LA G L N ++ + ++ I +S + L+++ GN++VQ
Sbjct: 308 FILKAVAQNCTRLAYQPDGLSLLQNCLERVSRKQKDDIFTQLSYQSLFLAQNSRGNWIVQ 367
Query: 214 HVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQI 271
VL DP ++ I LR HYV L+ K S VV+ CL+ ++ II E +N
Sbjct: 368 DVLRKGDPSHVEIIASCLRNHYVTLAKNKYSSNVVEWCLRVFHEGERSVIICEFINYPHF 427
Query: 272 LQVANDKYGNYVIQTAL 288
+ D++ N+ + TAL
Sbjct: 428 RDLVTDEFANFALSTAL 444
>gi|146423478|ref|XP_001487667.1| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 38/300 (12%)
Query: 14 LFSLAQDQEGSQYLQENL-----SSGDSRI--LDKLFWVVSGFTFELMSGQYGRFVFGKF 66
+ SLA+DQ G ++LQ+ + S+ R D +F VS +EL+ +G ++ K
Sbjct: 109 ILSLAKDQYGCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFGNYLVQKL 168
Query: 67 IESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRL 126
I C+E + LI+ + + LF + S+++ G+ +++K+I V++ L +++ L
Sbjct: 169 IAYCSEQNITLILESLLY--NLFQI-SINQHGTRALQKIIDAVSNKYQLTL-IVNGLSPY 224
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
L+ G+ VI + L FIY + ++ L +A H+ GC L ++++
Sbjct: 225 IIELIKDLNGNHVIQKILNKYPADDCQFIYDSIIKDLLVVATHKHGCCVLQKCLNHVTTE 284
Query: 187 RRKQILHLISVNA--ASLSRHRSGNYVVQHVLSLEDPFLIDAICFA--LRGHYVDLSLTK 242
+ Q I L + GNYV+Q+++S+ I+ F +R +L K
Sbjct: 285 QLSQFSARILTFEIFIKLINDQFGNYVLQYLISINS-LPINRAVFNNFVRFGVSNLCKLK 343
Query: 243 CGSFVVQK----------------CLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQT 286
S VV+K CLKY +I +L ++ ND YGNYV+QT
Sbjct: 344 FSSNVVEKFLKNCFNNEPISDAFSCLKYDLCYQILISDL------NKMINDPYGNYVVQT 397
>gi|393907055|gb|EJD74503.1| puf domain-containing protein 9 [Loa loa]
Length = 731
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 35/329 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ AQDQ GS+++Q+ L + +F V+ LM+ +G +V KF E
Sbjct: 388 VVEFAQDQHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTTE 447
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q IL + + LA + +G ++K ++ + P ++ ++ +
Sbjct: 448 QKN--ILTNAVKGNVMSLA-LQMYGCRVIQKALESIE--PKQQMEILKEMEGQVLKCVKD 502
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALE-----HCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ + +E + FI A + L+ H GC + +++ ++
Sbjct: 503 QNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDEQK 562
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ +L + + SL + GNYV+QHV+ SLED D I ++G + + K S
Sbjct: 563 RPVLDQLHKHVKSLIVDQYGNYVIQHVIEHGSLED---RDRIVNQVKGDVLHFAQHKFAS 619
Query: 246 FVVQKCLK-----YQNAVHYIIEELLNSDQI----LQVANDKYGNYVIQTAL--AETMRQ 294
V++KCL ++NA+ I E N + I L + D++ NYV+Q L A++
Sbjct: 620 NVIEKCLTCGEPHHKNAL--ITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVADS--- 674
Query: 295 DRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++ ++++ ++ H+ ALR YG ++
Sbjct: 675 ---ALRKKMMLAIKPHIPALRKYNYGKHI 700
>gi|194377510|dbj|BAG57703.1| unnamed protein product [Homo sapiens]
Length = 1127
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 794 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 853
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 854 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 907
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 908 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 962
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 963 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1022
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1023 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 1076
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1077 QRKIVMHKIRPHIATLRKYTYGKHI 1101
>gi|297282790|ref|XP_002802328.1| PREDICTED: pumilio homolog 1 [Macaca mulatta]
gi|332808253|ref|XP_003307983.1| PREDICTED: pumilio homolog 1 [Pan troglodytes]
gi|397515867|ref|XP_003828163.1| PREDICTED: pumilio homolog 1 isoform 4 [Pan paniscus]
gi|402853683|ref|XP_003891520.1| PREDICTED: pumilio homolog 1 isoform 3 [Papio anubis]
Length = 1127
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 794 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 853
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 854 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 907
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 908 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 962
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 963 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1022
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1023 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 1076
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1077 QRKIVMHKIRPHIATLRKYTYGKHI 1101
>gi|440298987|gb|ELP91602.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
invadens IP1]
Length = 486
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 144/324 (44%), Gaps = 29/324 (8%)
Query: 1 LQTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGR 60
L+ +F H + L +DQ+GS+ +Q+ L + ++++F +S +ELM +G
Sbjct: 157 LKQPSFFSTKTHTVTDLCKDQQGSRRIQQFLDTASKAEVEEIFNFISNDIYELMLDLFGN 216
Query: 61 FVFGKFIESCNESQLALIILKITFQDQL---FLLASVDKFGSSSVKKLIKVVAHLPPLLY 117
+V K E ++ F D + ++ S +G ++K ++ + +
Sbjct: 217 YVIQKLFE------FGTKEIRDVFMDVVKSRVVMLSTHTYGCRVIQKAVEFID--AKQMG 268
Query: 118 HVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLN 177
+ +K + + G+ VI + +E + + I + H + H GC +
Sbjct: 269 ILADEIKGHIVAFVEDQNGNHVIQRFIEFMPSIYSSMISEEITGHVVSFGKHAYGCRVVQ 328
Query: 178 NFIDNMKGSRRKQILHL-----ISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
++ RR+ ++H + N L+ ++ GNYV+QH+L + + ++
Sbjct: 329 KLVE-----RREDVIHRTLNKELENNIWDLAMNQYGNYVIQHLLEKGTRVQQNMVINEMK 383
Query: 233 GHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELL---NSDQILQVANDKYGNYVIQTA 287
G + + S K S VV+KC+ + E+ +++ +L++ D Y NYVIQT
Sbjct: 384 GKFCEFSTKKYSSNVVEKCMHCCTPTQRDGFVNEICGKKDNEMLLKLMKDPYANYVIQT- 442
Query: 288 LAETMRQDRLS--VHQRLVTKLQQ 309
L E M +++ + +R+ + Q
Sbjct: 443 LVEVMDEEQRKCFIEKRVFPNINQ 466
>gi|358369705|dbj|GAA86319.1| mRNA binding protein Pumilio 2 [Aspergillus kawachii IFO 4308]
Length = 932
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +S +++F + + +LM+ +G +V K E N++
Sbjct: 517 IVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQT 576
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
Q ++ ++ L S +G V+K ++ + L S +K L ++
Sbjct: 577 QKKILANQMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELESHVLRC 628
Query: 132 -MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ VI + +E + FI A LA H GC + +++ + R+
Sbjct: 629 VRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVDRLATHPYGCRVIQRMLEHCEEVDRES 688
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
IL + + L + GNYV+QHV+ + + + + S K S VV+K
Sbjct: 689 ILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEK 748
Query: 251 CLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
++Y ++ +I L + ++ ++ + D+YGNYVIQ L + D L
Sbjct: 749 SIEYGEESQRRQMISTLTSVNERGDSPLISLMRDQYGNYVIQKILGQL--DDTSEEKYSL 806
Query: 304 VTKLQQHLAALRVMKYGSNV 323
++Q L L+ YG +
Sbjct: 807 AVRIQPMLDQLKKFSYGKQI 826
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ ++Q+ I N+ L GNYVVQ + +
Sbjct: 516 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQ 575
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKY 279
+ ++GH + LS G VVQK L++ + +++EL +L+ D+
Sbjct: 576 TQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKEL--ESHVLRCVRDQN 633
Query: 280 GNYVIQTALAETMRQ-------------DRLSVHQ---RLVTKLQQH 310
GN+VIQ A+ Q DRL+ H R++ ++ +H
Sbjct: 634 GNHVIQKAIERVPSQYVQFIINAFKGQVDRLATHPYGCRVIQRMLEH 680
>gi|403293276|ref|XP_003937646.1| PREDICTED: pumilio homolog 1 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 1127
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 794 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 853
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 854 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 907
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 908 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 962
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 963 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1022
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1023 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 1076
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1077 QRKIVMHKIRPHIATLRKYTYGKHI 1101
>gi|390465605|ref|XP_002750597.2| PREDICTED: pumilio homolog 1 isoform 1 [Callithrix jacchus]
Length = 1129
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 796 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 855
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 856 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 909
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 910 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 964
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 965 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1024
Query: 248 VQKCLKYQNAVH--YIIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1025 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 1078
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1079 QRKIVMHKIRPHIATLRKYTYGKHI 1103
>gi|347836748|emb|CCD51320.1| similar to pumilio domain-containing protein [Botryotinia
fuckeliana]
Length = 964
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +S ++LF + +LM+ +G +V K E N Q+ +
Sbjct: 570 DQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGN--QVQKRV 627
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
L ++ + L S+ +G V+K ++ V L +K L ++ + G
Sbjct: 628 LAEQMKNHVMEL-SMQMYGCRVVQKALEHV-----LADQQAELVKELEADVLKCVKDQNG 681
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ + +E FI +A LA H GC + ++ + ++++L +
Sbjct: 682 NHVVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRILEYCQPRDQERVLEELH 741
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-- 254
A++L + GNYV QHV+ P I + + LS K S VV+K +++
Sbjct: 742 QCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSKHKFASNVVEKSIQFGT 801
Query: 255 QNAVHYIIEEL--LNSD--QILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
H I+ L L+SD LQ + D+YGNYVIQ L + +R + V L+
Sbjct: 802 DEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKGAERNA----FVEDLKP 857
Query: 310 HLAALRVMKYGSNV 323
L AL+ YG +
Sbjct: 858 QLLALKKYNYGKQI 871
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 155 IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQH 214
IYQ H + + + G + ++ ++Q+ I NA L GNYV+Q
Sbjct: 560 IYQ----HVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQK 615
Query: 215 VLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQIL 272
+ + + ++ H ++LS+ G VVQK L++ + +++EL +L
Sbjct: 616 LFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKEL--EADVL 673
Query: 273 QVANDKYGNYVIQTAL 288
+ D+ GN+V+Q A+
Sbjct: 674 KCVKDQNGNHVVQKAI 689
>gi|154298974|ref|XP_001549908.1| hypothetical protein BC1G_11734 [Botryotinia fuckeliana B05.10]
Length = 964
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 22/314 (7%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +S ++LF + +LM+ +G +V K E N Q+ +
Sbjct: 570 DQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGN--QVQKRV 627
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---TKPG 136
L ++ + L S+ +G V+K ++ V L +K L ++ + G
Sbjct: 628 LAEQMKNHVMEL-SMQMYGCRVVQKALEHV-----LADQQAELVKELEADVLKCVKDQNG 681
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ + +E FI +A LA H GC + ++ + ++++L +
Sbjct: 682 NHVVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRILEYCQPRDQERVLEELH 741
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-- 254
A++L + GNYV QHV+ P I + + LS K S VV+K +++
Sbjct: 742 QCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSKHKFASNVVEKSIQFGT 801
Query: 255 QNAVHYIIEEL--LNSD--QILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
H I+ L L+SD LQ + D+YGNYVIQ L + +R + V L+
Sbjct: 802 DEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKGAERNA----FVEDLKP 857
Query: 310 HLAALRVMKYGSNV 323
L AL+ YG +
Sbjct: 858 QLLALKKYNYGKQI 871
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 155 IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQH 214
IYQ H + + + G + ++ ++Q+ I NA L GNYV+Q
Sbjct: 560 IYQ----HVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQK 615
Query: 215 VLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQIL 272
+ + + ++ H ++LS+ G VVQK L++ + +++EL +L
Sbjct: 616 LFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKEL--EADVL 673
Query: 273 QVANDKYGNYVIQTAL 288
+ D+ GN+V+Q A+
Sbjct: 674 KCVKDQNGNHVVQKAI 689
>gi|197102622|ref|NP_001127595.1| pumilio homolog 1 [Pongo abelii]
gi|75041171|sp|Q5R5X3.1|PUM1_PONAB RecName: Full=Pumilio homolog 1
gi|55732279|emb|CAH92843.1| hypothetical protein [Pongo abelii]
Length = 1186
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 966
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 967 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 1135
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1136 QRKIVMHKIRPHIATLRKYTYGKHI 1160
>gi|118378471|ref|XP_001022411.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila]
gi|89304178|gb|EAS02166.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila SB210]
Length = 977
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 28/316 (8%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN- 71
DL +DQ S+ +Q+ + +K+F + LM Q+G +V K E
Sbjct: 549 DLIESCKDQNSSRTIQKQFENSTIEEKNKIFERIQPEALNLMKDQFGNYVIQKLFEKGTI 608
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
E + L + +QL S+ +G ++K ++ + P + ++ L +
Sbjct: 609 EHKEKLYYIIKGNVEQL----SLHTYGCRVIQKALEELKERPQMQEGLIQELNNKIMTCI 664
Query: 132 MTKPGSSVILQCLEPSYNHK-----NDFIYQAALE---------HCLY-----LACHEQG 172
+ G+ VI +C E + K N+ I LE + Y LA H G
Sbjct: 665 QDQNGNHVIQKCFETLSSSKLTTIINEVIQNVNLELQNKYLFNKNKFYQKIEELAFHPYG 724
Query: 173 CINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
C + ++ K+I + N L + GNY++Q+++ D I ++
Sbjct: 725 CRVIQRILEFCSNPETKKIYEKLMTNLIRLCECQYGNYIIQYIIEKGQKLEKDEILQVVK 784
Query: 233 GHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELL--NSDQILQVANDKYGNYVIQTAL 288
H+VDLSL K S V +K + Y + +++ LL N+ L++ + +GNYV+Q
Sbjct: 785 VHFVDLSLNKFASNVTEKSIVYSDEEFKAGVLDVLLRPNNQNHLELTKNAFGNYVVQRLY 844
Query: 289 AETMRQDRLSVHQRLV 304
+ + +L V Q L+
Sbjct: 845 EKAQHETKLRVCQYLL 860
>gi|301777185|ref|XP_002924016.1| PREDICTED: pumilio homolog 1-like [Ailuropoda melanoleuca]
Length = 1114
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 781 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 840
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 841 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 894
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 895 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 949
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 950 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1009
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLS 298
V+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q ++
Sbjct: 1010 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIV 1068
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1069 MH-----KIRPHIATLRKYTYGKHI 1088
>gi|73950060|ref|XP_865319.1| PREDICTED: pumilio homolog 1 isoform 14 [Canis lupus familiaris]
Length = 1186
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 966
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 967 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLS 298
V+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q ++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIV 1140
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1141 MH-----KIRPHIATLRKYTYGKHI 1160
>gi|13491166|ref|NP_055491.1| pumilio homolog 1 isoform 2 [Homo sapiens]
gi|332808248|ref|XP_001157169.2| PREDICTED: pumilio homolog 1 isoform 3 [Pan troglodytes]
gi|397515861|ref|XP_003828160.1| PREDICTED: pumilio homolog 1 isoform 1 [Pan paniscus]
gi|402853679|ref|XP_003891518.1| PREDICTED: pumilio homolog 1 isoform 1 [Papio anubis]
gi|41688619|sp|Q14671.3|PUM1_HUMAN RecName: Full=Pumilio homolog 1; Short=HsPUM; Short=Pumilio-1
gi|11139706|gb|AAG31807.1|AF315592_1 Pumilio 1 [Homo sapiens]
gi|15426559|gb|AAH13398.1| Pumilio homolog 1 (Drosophila) [Homo sapiens]
gi|119628038|gb|EAX07633.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|119628039|gb|EAX07634.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158256990|dbj|BAF84468.1| unnamed protein product [Homo sapiens]
gi|325463587|gb|ADZ15564.1| pumilio homolog 1 (Drosophila) [synthetic construct]
gi|380784597|gb|AFE64174.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|383410801|gb|AFH28614.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|384943766|gb|AFI35488.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|410225216|gb|JAA09827.1| pumilio homolog 1 [Pan troglodytes]
gi|410266288|gb|JAA21110.1| pumilio homolog 1 [Pan troglodytes]
gi|410304036|gb|JAA30618.1| pumilio homolog 1 [Pan troglodytes]
gi|410350699|gb|JAA41953.1| pumilio homolog 1 [Pan troglodytes]
Length = 1186
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 966
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 967 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 1135
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1136 QRKIVMHKIRPHIATLRKYTYGKHI 1160
>gi|410966646|ref|XP_003989841.1| PREDICTED: pumilio homolog 1 isoform 1 [Felis catus]
Length = 1186
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 966
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 967 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLS 298
V+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q ++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIV 1140
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1141 MH-----KIRPHIATLRKYTYGKHI 1160
>gi|403293270|ref|XP_003937643.1| PREDICTED: pumilio homolog 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1186
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 966
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 967 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 1135
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1136 QRKIVMHKIRPHIATLRKYTYGKHI 1160
>gi|361128047|gb|EHK99999.1| putative Pumilio like protein [Glarea lozoyensis 74030]
Length = 447
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 143/320 (44%), Gaps = 17/320 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q+ L + +S ++LF + +LM+ +G +V K E
Sbjct: 50 NH-VVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHG 108
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N Q+ +L ++ + L S+ +G V+K ++ V L ++ L+
Sbjct: 109 N--QIQKRVLAEQMKNHVMEL-SMQMYGCRVVQKALEHV--LADQQAELVEELRSDVLKC 163
Query: 131 MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ + G+ V+ + +E F+ A LA H GC + ++ K +
Sbjct: 164 VKDQNGNHVVQKAIERVPTEHIQFVIDAFRGQVHVLATHPYGCRVIQRILEYCKPHDQAV 223
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L + A+ L + GNYV QHV+ P I + + LS K S VV+K
Sbjct: 224 VLEELHQCASMLITDQYGNYVTQHVIQHGKPEDRAKIIKIITAQLLTLSKHKFASNVVEK 283
Query: 251 CLKYQNAVHY--IIEEL--LNSD--QILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRL 303
+++ + I+ +L ++SD LQ + D+YGNYVIQ L + ++R
Sbjct: 284 SIQFGTSEQRKAIVAQLTAMHSDGSSPLQLMMKDQYGNYVIQKLLGQLKGEER----DNF 339
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V ++ L L+ +G +
Sbjct: 340 VEDMKPQLIQLKKYNFGKQI 359
>gi|426221803|ref|XP_004005096.1| PREDICTED: pumilio homolog 1 isoform 1 [Ovis aries]
Length = 1180
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 34/326 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++LM +G +V KF E + E
Sbjct: 847 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 906
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRL 126
+LAL + + LA + +G ++K ++ + + L HV+ +K
Sbjct: 907 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK-- 960
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ G+ V+ +C+E FI A L+ H GC + +++
Sbjct: 961 ------DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1014
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 1015 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1074
Query: 247 VVQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRL 297
VV+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q ++
Sbjct: 1075 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKI 1133
Query: 298 SVHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1134 VMH-----KIRPHIATLRKYTYGKHI 1154
>gi|338721822|ref|XP_001916930.2| PREDICTED: pumilio homolog 1 [Equus caballus]
Length = 1163
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 830 IMEFSQDQHGSRFIQLKLERATPTERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 889
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 890 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPADQQNEMVRELDGHVLKCVK--- 943
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 944 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 998
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 999 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1058
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLS 298
V+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q ++
Sbjct: 1059 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIV 1117
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1118 MH-----KIRPHIATLRKYTYGKHI 1137
>gi|344287508|ref|XP_003415495.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Loxodonta
africana]
Length = 1185
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 852 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 911
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 912 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPADQQNEMVRELDGHVLKCVK--- 965
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 966 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1020
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 1021 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1080
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLS 298
V+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q ++
Sbjct: 1081 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIV 1139
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1140 MH-----KIRPHIATLRKYTYGKHI 1159
>gi|240280462|gb|EER43966.1| mRNA binding protein Pumilio 2 [Ajellomyces capsulatus H143]
Length = 900
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 23/292 (7%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L S +S D++F + +LM+ +G +V K E
Sbjct: 543 NH-IVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHG 601
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N+SQ ++ ++ L S +G V+K ++ + L S +K L +
Sbjct: 602 NQSQKKILANQMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHV 653
Query: 131 M---MTKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI + +E PS + + FI A LA H GC + +++
Sbjct: 654 LKCVKDQNGNHVIQKAVERVPSVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCTE 711
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
R+ +L + +SL + GNYV+QHV+ + I + + S K S
Sbjct: 712 PDRRAVLEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFAS 771
Query: 246 FVVQKCLKY--QNAVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAE 290
VV+K +++ + I+ +L + +L + D+YGNYVIQ L +
Sbjct: 772 NVVEKSIEFGADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQ 823
>gi|300797595|ref|NP_001180052.1| pumilio homolog 1 [Bos taurus]
gi|296490233|tpg|DAA32346.1| TPA: pumilio homolog 1 [Bos taurus]
Length = 1186
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++LM +G +V KF E +
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLE 912
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 913 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 966
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 967 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTAL--AETMRQDRLS 298
V+KC+ + + +I+E+ + A D+Y NYV+Q + AE Q ++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIV 1140
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNV 323
+H K++ H+A LR YG ++
Sbjct: 1141 MH-----KIRPHIATLRKYTYGKHI 1160
>gi|123509694|ref|XP_001329922.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121912972|gb|EAY17787.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 408
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 14/288 (4%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+D+ LQ+ ++ D +F + EL+ FV K E+ E Q +
Sbjct: 93 MAKDRSDCIQLQDQIARATPTERDTIFNALYPHMGELVCDGAANFVIQKLCENITEEQQS 152
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+ L +D F++ + G ++K I+ + P + + AL F L ++ G
Sbjct: 153 RM-LSFFLEDVQFIVDHPN--GCRVLQKFIEQTS--PKNIDPIFLALLPRFVELCSSQNG 207
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ + + + N + I + H L GC + D ++ +
Sbjct: 208 NHIAQRFIIKIPNRVPEIIDKIK-GHVYELVVDNWGCRVIQQLFDRQPIQDLIPLVDEVL 266
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--- 253
A +L+ ++ GNYVVQ++L+ P I A+ A GH+ + S+ K S V++KC++
Sbjct: 267 CRAETLATNQFGNYVVQNILNSGTPEHIQALIRAFTGHFYEFSMHKFASNVIEKCIRKAN 326
Query: 254 --YQNAVHYII---EELLNSDQILQVANDKYGNYVIQTALAETMRQDR 296
QN + I EE N +I ++ +D++GNYVIQ + + R
Sbjct: 327 QQQQNMIFTEIIGPEENYNKPRIKEMVSDQFGNYVIQRIIEFGTKSQR 374
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLE 219
LE ++ H GC L FI+ I + L ++GN++ Q + ++
Sbjct: 159 LEDVQFIVDHPNGCRVLQKFIEQTSPKNIDPIFLALLPRFVELCSSQNGNHIAQRFI-IK 217
Query: 220 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYI--IEELLNSDQILQVAND 277
P + I ++GH +L + G V+Q+ Q I ++E+L + L A +
Sbjct: 218 IPNRVPEIIDKIKGHVYELVVDNWGCRVIQQLFDRQPIQDLIPLVDEVLCRAETL--ATN 275
Query: 278 KYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++GNYV+Q L + Q L+ H + K+ SNV
Sbjct: 276 QFGNYVVQNILNSGTPEH----IQALIRAFTGHFYEFSMHKFASNV 317
>gi|384484809|gb|EIE76989.1| hypothetical protein RO3G_01693 [Rhizopus delemar RA 99-880]
Length = 747
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 23/263 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q+ L + +S +F V +LM+ +G +V KF E N+
Sbjct: 492 IVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGNQM 551
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALK-RLFKFL-- 130
Q ++ ++ L S+ +G V+K L HV++ + +L K L
Sbjct: 552 QKTILAKQMEGH---VLSLSLQMYGCRVVQKA----------LEHVLTEQQAKLVKELDG 598
Query: 131 -----MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ VI + +E FI A LA H GC + ++
Sbjct: 599 CVLKCIKDQNGNHVIQKAIERVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMFEHCTE 658
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ +L + + L + + GNYV+QH+L P + +RGH + LS K S
Sbjct: 659 DQTGPLLDELHRCTSQLVQDQYGNYVIQHILERGRPADKSLVIEKIRGHVLQLSKHKFAS 718
Query: 246 FVVQKCLKY--QNAVHYIIEELL 266
VV+KC+ + + +IEE+L
Sbjct: 719 NVVEKCVDFGSKRDRQLLIEEVL 741
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 204 RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYI 261
+ ++GN+V+Q + I I A G +L+ G V+Q+ ++ ++ +
Sbjct: 605 KDQNGNHVIQKAIERVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMFEHCTEDQTGPL 664
Query: 262 IEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 321
++EL Q+ D+YGNYVIQ L D+ V + K++ H+ L K+ S
Sbjct: 665 LDELHRC--TSQLVQDQYGNYVIQHILERGRPADKSLV----IEKIRGHVLQLSKHKFAS 718
Query: 322 NV 323
NV
Sbjct: 719 NV 720
>gi|301609979|ref|XP_002934529.1| PREDICTED: pumilio homolog 2-like [Xenopus (Silurana) tropicalis]
Length = 1175
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q+ L +F + ++LM+ +G +V KF E +
Sbjct: 842 IVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMD 901
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA------HLPPLLYHVMSALKRLF 127
Q + +I + + LA + +G ++K ++ ++ + L HV+ +K
Sbjct: 902 QKLALATRI--RGHVLPLA-LQMYGCRVIQKALESISIDQQSEMVRELDGHVLKCVK--- 955
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 956 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQ 1010
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL I +RG + LS K S V
Sbjct: 1011 TLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNV 1070
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1071 VEKCVTHSSRTERALLIDEICCQNDGPHCALYTMMKDQYANYVVQKMI------DMAEPA 1124
Query: 301 QR--LVTKLQQHLAALRVMKYGSNV 323
QR ++ K++ H+ LR YG ++
Sbjct: 1125 QRKIIMHKIRPHITTLRKYTYGKHI 1149
>gi|390598145|gb|EIN07544.1| hypothetical protein PUNSTDRAFT_53691 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 570
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 138/315 (43%), Gaps = 39/315 (12%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFW--VVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 77
DQ GS+++Q+ L + + +F V G +L +G +V K +E C+ +Q
Sbjct: 247 DQHGSRFIQQKLEGASAEEREAVFAEIVPGGHALQLTQDVFGNYVVQKLLEHCSPAQR-- 304
Query: 78 IILKITFQDQLFLLASVDKFGSSSVKKLI---------KVVAHLPPLLYHVMSALKRLFK 128
+ + D + L S+ +G V+K + K V L P HV+ +K
Sbjct: 305 VAIAECLSDHVLAL-SLQMYGCRVVQKALEYLPESHQAKFVRELEP---HVIRCVKDANG 360
Query: 129 FLMMTKPGSSVILQCLEPSY-NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
++ K I++ + PS N F H LA H GC L ++ + +
Sbjct: 361 NHVIQK-----IIERVNPSLLTFVNGF-----QSHVFELASHPYGCRVLQRCLEYLSPEQ 410
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
+ +L + L + + GNYV+Q VL P + LRG + ++ K S V
Sbjct: 411 TRGLLAELHECTIQLMQDQFGNYVIQFVLEHGAPQDRAEVVQKLRGQMLPMARHKFASNV 470
Query: 248 VQKCL--KYQNAVHYIIEELL-----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVH 300
+K L ++ +I+E+L S I+ + D+Y NYV+Q A++ T D+
Sbjct: 471 CEKALVTAEPDSRRALIDEILAQGADGSSPIVTMMKDQYANYVLQRAVS-TAEPDQ---Q 526
Query: 301 QRLVTKLQQHLAALR 315
+ L+++++ L +R
Sbjct: 527 ETLISRIRPQLLTMR 541
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 9/190 (4%)
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ V+ + LE + I + +H L L+ GC + ++ + S + + + +
Sbjct: 288 GNYVVQKLLEHCSPAQRVAIAECLSDHVLALSLQMYGCRVVQKALEYLPESHQAKFVREL 347
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY- 254
+ + +GN+V+Q ++ +P L+ + + H +L+ G V+Q+CL+Y
Sbjct: 348 EPHVIRCVKDANGNHVIQKIIERVNPSLLTFVN-GFQSHVFELASHPYGCRVLQRCLEYL 406
Query: 255 -QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAA 313
++ EL + +Q+ D++GNYVIQ L QDR V V KL+ +
Sbjct: 407 SPEQTRGLLAEL--HECTIQLMQDQFGNYVIQFVLEHGAPQDRAEV----VQKLRGQMLP 460
Query: 314 LRVMKYGSNV 323
+ K+ SNV
Sbjct: 461 MARHKFASNV 470
>gi|397646257|gb|EJK77194.1| hypothetical protein THAOC_00992 [Thalassiosira oceanica]
Length = 743
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 151 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 210
+ FI+ A +A H GC + +D+ + R ++ I + L + GNY
Sbjct: 396 RTQFIFDAVAASVEDVARHRHGCCVIQRCLDSRHSAARSHLVDRIVEKSLELMQDAYGNY 455
Query: 211 VVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLN--- 267
VVQ+VL + + AIC ++ G L++ K S V++KCL + + EE LN
Sbjct: 456 VVQYVLDVCGDDEVHAICESVVGKVCVLAVQKFSSNVMEKCL--ERCTDRVREEYLNELN 513
Query: 268 -SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ---RLVTKLQQHLA 312
SD++ ++ D +GNYV+Q AL+ +S H RLV ++ HL+
Sbjct: 514 DSDRLRELMMDPFGNYVVQRALS-------VSTHAQAIRLVETMKPHLS 555
>gi|308198245|ref|XP_001387179.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
gi|149389106|gb|EAZ63156.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
Length = 528
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 153/308 (49%), Gaps = 32/308 (10%)
Query: 13 DLFSLAQDQEGSQYLQ----ENLSSGDSRILDK---LFWVVSGFTFELMSGQYGRFVFGK 65
D+ L++DQ G ++LQ ENL L+ +F + + +EL+ +G ++ K
Sbjct: 135 DILRLSKDQYGCRFLQKKIDENLIPNYQTRLNNFEVIFAQIHPYLYELIIDPFGNYLIQK 194
Query: 66 FIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKR 125
I CNES L L IL+I Q LF + S+++ G+ +++K+I + + L ++ +K
Sbjct: 195 LIVYCNESNLNL-ILQI-LQYNLFQI-SINQHGTRALQKIIDNLNNQYQLNL-LIKGMKP 250
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L+ G+ VI + L FIY + +E +A H+ GC L ++++
Sbjct: 251 YIIELIKDLNGNHVIQKILNKYPPSDCQFIYDSIIEGLYVVASHKHGCCVLQKCLNHVTM 310
Query: 186 SRRKQILHLI--SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFA--LRGHYVDLSLT 241
++ ++ I N L + GNYV+Q+++S+ + F I+ F L+ +L
Sbjct: 311 TQLQEFSACILDFANFQLLINDQFGNYVLQYLISI-NSFEINYKIFQNFLQFGINNLCNL 369
Query: 242 KCGSFVVQKCLK--YQN-------AVHY------IIEELLNSDQILQVANDKYGNYVIQT 286
K S VV+K LK Y N AV++ +I +L +D + ++ ND YGNYVIQT
Sbjct: 370 KFSSNVVEKFLKNCYNNEAYNGVTAVNFSNLKMELIYNILIND-LNKLINDPYGNYVIQT 428
Query: 287 ALAETMRQ 294
+ + Q
Sbjct: 429 LIDILINQ 436
>gi|168278511|dbj|BAG11135.1| pumilio homolog 1 [synthetic construct]
Length = 1162
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 136/319 (42%), Gaps = 18/319 (5%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++Q L +F + ++L +G +V KF E +
Sbjct: 827 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKFFEFGSLE 886
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMT 133
Q + +I L ++ +G ++K ++ + ++ ++ L +
Sbjct: 887 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKD 943
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 944 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1003
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1004 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1063
Query: 254 YQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT- 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1064 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIVM 1117
Query: 306 -KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1118 HKIRPHIATLRKYTYGKHI 1136
>gi|213402511|ref|XP_002172028.1| meiotic coiled-coil protein [Schizosaccharomyces japonicus yFS275]
gi|212000075|gb|EEB05735.1| meiotic coiled-coil protein [Schizosaccharomyces japonicus yFS275]
Length = 670
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 29/320 (9%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ+ S +LQ+ L I + + + LM ++G F ++ C E +
Sbjct: 345 DQQASVFLQQKLKVAAPAIKHSIIDTILEQAYPLMLNRFGNF----LVQRCFEHGWPQHV 400
Query: 80 LKI--TFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFLM 131
I T LA+ D FG V+K + V A L L H+ S + + +
Sbjct: 401 RAIGETILGHALQLAT-DPFGCHVVQKALDNVTEDIKLAILDELFVHIGSTITHHYACHV 459
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
K +C ND + E +A E G + + N +N +++
Sbjct: 460 WQKLFEVRWSECGSNLMTRVNDALRGKWAE----IALGENGSLVVQNMFENCVEEDKREC 515
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + N +++R + GN+V+QH+L P +D + L D S+ + S V++K
Sbjct: 516 IEEVISNLDTIARGQWGNWVIQHMLENGHPKDLDRVTTLLLAKAADYSVDQYASKVIEKA 575
Query: 252 LK--YQNAVHYIIEELLNS------DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
+K N + + ++ + ++ +A+D+YGNY++Q L Q++ + +
Sbjct: 576 IKIGSNNFIPRYLTQVTTTRVNRTRQPLVDIASDQYGNYLVQQILQVAQPQEK----EVV 631
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V +++H+ +LR KYG V
Sbjct: 632 VRHIKKHMVSLRGSKYGQKV 651
>gi|406607197|emb|CCH41458.1| hypothetical protein BN7_999 [Wickerhamomyces ciferrii]
Length = 893
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 138/293 (47%), Gaps = 27/293 (9%)
Query: 13 DLFSLA----QDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE 68
D+F A +DQ GS+++Q+ L + +F + + ELM+ +G +V K+ E
Sbjct: 554 DIFGSAVEFSKDQHGSRFIQQQLEISSDEENEVIFNEIREASLELMTDVFGNYVIQKYFE 613
Query: 69 SCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL--LYHVMSALKRL 126
+++Q +++ ++ Q Q S+ +G V+K I+ V PL +++ LK
Sbjct: 614 HGSDTQRQVLLEQMKNQVQHL---SMQMYGCRVVQKAIEYV----PLNDQISIITELKDS 666
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
+ + G+ VI + +E K +FI + +L+ H GC + ++ K
Sbjct: 667 IVSCIKDQNGNHVIQKSIEKIPIEKIEFILDSLKTQIYHLSTHTYGCRVIQRLLEFSKPK 726
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
++ IL+ ++ L + + GNYV+QH++ P I + G VD S K S
Sbjct: 727 DQEYILNELNKFTYFLIQDQFGNYVIQHIIEHGKPSERKLIVDTVLGSVVDFSKHKFASN 786
Query: 247 VVQKCLKYQNAVHY--IIEELL-----NSDQILQ-------VANDKYGNYVIQ 285
VV+KC+ + + I++E+L + D+ + + D++ NYV+Q
Sbjct: 787 VVEKCVIFGDDEQRSLILDEVLKNNEKDDDKPVDDRSPLGLMMKDQFANYVVQ 839
>gi|449681928|ref|XP_002162083.2| PREDICTED: uncharacterized protein LOC100200828, partial [Hydra
magnipapillata]
Length = 940
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 115/249 (46%), Gaps = 11/249 (4%)
Query: 12 HDL----FSLAQDQEGSQYLQENLSSGDSRILDK--LFWVVSGFTFELMSGQYGRFVFGK 65
HDL +QDQ GS+++Q+ L + +L+K +F + + LM+ +G +V K
Sbjct: 678 HDLQRHIVEFSQDQHGSRFIQQKLER--ASVLEKTMVFNEILSAAYSLMTDVFGNYVIQK 735
Query: 66 FIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKR 125
F E + Q L+ +I L ++ +G ++K ++ + P+ ++ L
Sbjct: 736 FFEFGSPEQKLLLAQRIKGH---VLPLALQMYGCRVIQKALETIPSEIPIHGELVKELDG 792
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ + G+ V+ +C+E + + FI A L+ H GC + +++
Sbjct: 793 HVLKCVKDQNGNHVVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCTQ 852
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ IL + + L + + GNYV+QHVL P I +RG+ + LS K S
Sbjct: 853 EQTAPILAELHEHTERLIQDQYGNYVIQHVLEHGSPEDKSTIVNIVRGNVLLLSQHKFAS 912
Query: 246 FVVQKCLKY 254
V++KC+ +
Sbjct: 913 NVIEKCVTH 921
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 204 RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYI 261
+ ++GN+VVQ + D + I A +G LS G V+Q+ L++ Q I
Sbjct: 799 KDQNGNHVVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCTQEQTAPI 858
Query: 262 IEEL-LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 320
+ EL ++++++Q D+YGNYVIQ L +D+ ++ V ++ ++ L K+
Sbjct: 859 LAELHEHTERLIQ---DQYGNYVIQHVLEHGSPEDKSTI----VNIVRGNVLLLSQHKFA 911
Query: 321 SNV 323
SNV
Sbjct: 912 SNV 914
>gi|427794829|gb|JAA62866.1| Putative translational repressor pumilio/puf3, partial
[Rhipicephalus pulchellus]
Length = 332
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 37/321 (11%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
NH + +QDQ GS+++Q+ L +F + G + LM+ +G +V KF E
Sbjct: 12 ANH-IVEFSQDQHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKFFEF 70
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKF 129
+ Q + LK+ L ++ +G ++K ++ ++ P V+ L
Sbjct: 71 GSAEQKQALALKVKGH---VLPLALQMYGCRVIQKALESIS--PDQQKEVVKELDGHVLK 125
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
+ + G+ V+ +C+E FI A L+ H GC + +++ G +
Sbjct: 126 CVKDQNGNHVVQKCIECVDPSALQFIINAFQGQVFCLSTHPYGCRVIQRILEHCTGEQTG 185
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+L + H+ +VQ D A+RG + LS K S VV+
Sbjct: 186 PVLEEL---------HQHTEQLVQ-----------DQYGXAVRGRVLPLSQHKFASNVVE 225
Query: 250 KCLKY--QNAVHYIIEELL-----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQR 302
KC+ + ++ +IEE+ + + D+Y NYV+Q + R +
Sbjct: 226 KCVTHASRSERALLIEEVCAYVDGPHSALYTMMKDQYANYVVQKMIEVAEPPQR----KL 281
Query: 303 LVTKLQQHLAALRVMKYGSNV 323
L+ K++ H+ +LR YG ++
Sbjct: 282 LLHKIRPHVPSLRKYTYGKHI 302
>gi|154343920|ref|XP_001567904.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065238|emb|CAM40666.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 818
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 16/239 (6%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
A+DQEGS+++Q + S LD LF + EL++ +G +V K ++ N QL
Sbjct: 409 FAKDQEGSRFIQSAVDSASPESLDILFHEIFEAPLELVTDIFGNYVLQKLLDKGNTPQLT 468
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL-LYHVMSALKRLFKFLMMTKP 135
++ + ++ +G ++K I+V +PP L +++ LK + +
Sbjct: 469 FAAERMCGH---VVELTMQTYGCRVIQKCIEV---MPPAGLDIILAELKDNVAKCIQDQN 522
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR---KQIL 192
G+ VI +C+E + FI A + LA H GC + + + ++L
Sbjct: 523 GNHVIQKCVE-VIPQQCGFIISAFSGRVMELATHAYGCRVIQCIMQHCPEQEDTIFNELL 581
Query: 193 HLISVNAASLSRHRSGNYVVQHVL-SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+ V L++ + GNYV+QHVL +++D I+++ AL+ + LS K S V++K
Sbjct: 582 KAVDV----LAKDQYGNYVIQHVLQNVKDENKIESVYAALKPKFFYLSKQKFASNVMEK 636
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ V+ + L+ + F + H + L GC + I+ M + IL +
Sbjct: 451 GNYVLQKLLDKGNTPQLTFAAERMCGHVVELTMQTYGCRVIQKCIEVMPPAGLDIILAEL 510
Query: 196 SVNAASLSRHRSGNYVVQ---HVLSLEDPFLIDAIC---FALRGHYVDLSLTKCGSFVVQ 249
N A + ++GN+V+Q V+ + F+I A L H + +C ++Q
Sbjct: 511 KDNVAKCIQDQNGNHVIQKCVEVIPQQCGFIISAFSGRVMELATHAYGCRVIQC---IMQ 567
Query: 250 KCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
C + ++ I ELL + +L A D+YGNYVIQ L ++++ + + L+
Sbjct: 568 HCPEQEDT---IFNELLKAVDVL--AKDQYGNYVIQHVLQNVKDENKI---ESVYAALKP 619
Query: 310 HLAALRVMKYGSNV 323
L K+ SNV
Sbjct: 620 KFFYLSKQKFASNV 633
>gi|58257646|dbj|BAA07895.3| KIAA0099 protein [Homo sapiens]
Length = 1175
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 139/320 (43%), Gaps = 20/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-E 72
+ +QDQ GS+++Q L +F + ++L +G +V KF E + E
Sbjct: 840 IMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKFFEFGSLE 899
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+LAL + + LA + +G ++K ++ + ++ ++ L +
Sbjct: 900 QKLALAE---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVK 955
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ V+ +C+E FI A L+ H GC + +++ + IL
Sbjct: 956 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1015
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+
Sbjct: 1016 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV 1075
Query: 253 KYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVHQRLVT 305
+ + +I+E+ + A D+Y NYV+Q + D QR +
Sbjct: 1076 THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPGQRKIV 1129
Query: 306 --KLQQHLAALRVMKYGSNV 323
K++ H+A LR YG ++
Sbjct: 1130 MHKIRPHIATLRKYTYGKHI 1149
>gi|393245475|gb|EJD52985.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 503
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 148/326 (45%), Gaps = 22/326 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+ + DQ GS+++Q+ L S S +F +V +L+ +G +V K E
Sbjct: 42 IVEFSGDQHGSRFIQQKLESATSEEKQIVFDEIVPESALQLIQDVFGNYVIQKLFEYG-- 99
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+Q+ L T ++ + L S+ +G V+K I+ + LP + L+ ++M
Sbjct: 100 TQVQKTALANTMENHILQL-SLQMYGCRVVQKAIEYI--LPEQQASFVKELEAHVLKIVM 156
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + +E + F++ + +Y L+ H GC L + + + + +
Sbjct: 157 DANGNHVIQKLIERVSPERLGFVH--SFRGSVYELSTHPFGCRVLQRCFEYLTDDQTRPL 214
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
L + ++L + + GNYVVQ VL P I LRG + ++ K S V +K
Sbjct: 215 LDELHKYTSNLMQDQFGNYVVQFVLEHGKPEDRLLIISRLRGQMLHMAKHKFASNVCEKA 274
Query: 252 L--KYQNAVHYIIEELLNS-----DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
L + +I+E++ ++ + D++ NYV+Q AL+ + + ++LV
Sbjct: 275 LITADEENQRLLIDEIMTPRADGFSPVVTMMKDQFANYVLQRALSVATGEQK----KQLV 330
Query: 305 TKLQQHLAALRVMKYGSNVYKWTTAS 330
++ HL ++ +Y SN K AS
Sbjct: 331 ALVRSHLTNMK--RYSSNYTKHLVAS 354
>gi|407397270|gb|EKF27682.1| pumilio protein, putative [Trypanosoma cruzi marinkellei]
Length = 827
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 8/235 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
AQDQEGS+++Q + S +D LF + L++ +G +V K +E N QLA
Sbjct: 418 FAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLA 477
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ Q+ + L ++ +G ++K I+V+ P L +++ LK + + G
Sbjct: 478 HAATRL--QNNVVSL-TLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 532
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ +C+E + + FI A + LA H GC + + + + + I I
Sbjct: 533 NHVVQKCVEVT-PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCP-DQEEVIFSEIL 590
Query: 197 VNAASLSRHRSGNYVVQHVLS-LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L++ + GNYV+QHVL ++D + + AL+ + + S K S V++K
Sbjct: 591 KCVDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKNDFYEFSKQKFASNVMEK 645
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 51/284 (17%)
Query: 44 WVVS---GFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSS 100
W +S G+ E Q G + +ES ++ + +I F+ L L+ D FG+
Sbjct: 406 WRISHILGYAVEFAQDQEGSRFIQRAVESATHDEVDALFHEI-FESPLVLV--TDIFGNY 462
Query: 101 SVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAAL 160
++KL++V L H + L+ L + G VI +C+E D I
Sbjct: 463 VLQKLLEVGNAR--QLAHAATRLQNNVVSLTLQTYGCRVIQKCIEVMPPEGLDII----- 515
Query: 161 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLED 220
+ +KG N A + ++GN+VVQ + +
Sbjct: 516 -------------------LAELKG------------NVAKCIQDQNGNHVVQKCVEV-T 543
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-QNAVHYIIEELLNSDQILQVANDKY 279
P I A G ++L+ G V+Q +++ + I E+L L A D+Y
Sbjct: 544 PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPDQEEVIFSEILKCVDTL--AKDQY 601
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GNYVIQ L +++++ R+ L+ K+ SNV
Sbjct: 602 GNYVIQHVLQHMKDENKVT---RVFNALKNDFYEFSKQKFASNV 642
>gi|150951083|ref|XP_001387330.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
gi|149388306|gb|EAZ63307.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
Length = 835
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 148/316 (46%), Gaps = 29/316 (9%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q+ L + +F + +++LM+ +G +V K+ E + +Q
Sbjct: 501 FTKDQHGSRFIQQKLPDASDEEKEVIFNEIRDISYDLMTDVFGNYVIQKYFEHGSTTQKK 560
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM---T 133
+++ + ++ L S+ +G V++ ++ + L + ++ L ++++
Sbjct: 561 VLLDYMI--GHIYEL-SLQMYGCRVVQRALEAID-----LDGQIKIIEELRDYILICAKD 612
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI + +E + FI + +L+ H GC + ++ ++ IL
Sbjct: 613 QNGNHVIQKSIERIPFDRIRFILDSLDNQIYHLSTHPYGCRVIQRLLEYSNVEDQQVILQ 672
Query: 194 LISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK 253
++ L + + GNYV+QH+L +P +AI + G V+ S K S V++KC+K
Sbjct: 673 ELNRFIFYLIQDQYGNYVMQHILERGEPDDREAILKVVLGSVVNFSKHKFASNVIEKCIK 732
Query: 254 YQ--NAVHYIIEELLNSDQILQVA------------NDKYGNYVIQTALAETMRQDRLSV 299
Y + I+ E++ ++ V D+Y NYVIQ L E D S
Sbjct: 733 YGTLSQRKRILREVMLGNEDFNVELVSDESPLALMMKDQYANYVIQK-LVEGF--DANSE 789
Query: 300 HQR-LVTKLQQHLAAL 314
+R LV KL+Q+L +
Sbjct: 790 EKRILVVKLRQYLKQI 805
>gi|392595849|gb|EIW85172.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 378
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 22/320 (6%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 78
DQ GS+++Q+ L S S ++F +V T L +G +V K E + +Q+
Sbjct: 65 DQHGSRFIQQKLESASSDEKQRIFDEIVPSHTLALSQDVFGNYVIQKLFE--HGTQIQKS 122
Query: 79 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSS 138
L T + + L S+ +G ++K I+ + LP + L+ + G+
Sbjct: 123 ALANTLEGHVLPL-SLQMYGCRVIQKAIEFI--LPEQQGKFVRELEPHLARCVKDANGNH 179
Query: 139 VILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISV 197
VI + +E K F++ + +Y L+ H GC L ++++ + ++ +
Sbjct: 180 VIQKLIERVAADKLGFVH--SFRGNVYDLSTHPYGCRVLQRCLEHLPDDMTRSLMDELHK 237
Query: 198 NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQN- 256
+L + + GNYVVQ VL P + LRG ++++ K S V +K L N
Sbjct: 238 YVINLMQDQFGNYVVQFVLEKCQPHDRSLVITKLRGQLLNMARHKFASNVCEKALVTANY 297
Query: 257 -AVHYIIEELLNS-----DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+I+E++ I+ + D+Y NYV+Q AL + + + L K++
Sbjct: 298 DERRTLIDEIITPKADGVSPIVSMMKDQYANYVLQRALTVAEGEQK----EILANKIRPQ 353
Query: 311 LAALRVMKYGSNVYKWTTAS 330
L A+R +Y S K +S
Sbjct: 354 LTAMR--RYSSAYSKHLISS 371
>gi|195653665|gb|ACG46300.1| hypothetical protein [Zea mays]
Length = 238
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E F+ A L+ H GC + +++ G+ + Q I+
Sbjct: 24 QNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCII 83
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I L++ + GNYV QHVL I L G V +S K S V++KC
Sbjct: 84 DEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCF 143
Query: 253 KYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
++ + + I+E+ ++ +L + D+Y NYV+ L ET +D+ + L++
Sbjct: 144 QHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVHKIL-ETCNEDQREL---LLSH 199
Query: 307 LQQHLAALRVMKYGSNV 323
++ H+ ALR YG ++
Sbjct: 200 VKDHMQALRKYTYGKHI 216
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 183 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
M+ ++ ++H + + R ++GN+V+Q + I + A +G LS+
Sbjct: 1 MELDQKIDLVHELDGHIMQCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHP 60
Query: 243 CGSFVVQKCLKY---QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
G V+Q+ L++ + II+E+L IL A D+YGNYV Q L +R
Sbjct: 61 YGCRVIQRILEHCGGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKA 112
Query: 300 HQR--LVTKLQQHLAALRVMKYGSNV 323
H+R ++TKL + + KY SNV
Sbjct: 113 HERSQIITKLAGQVVTMSQNKYASNV 138
>gi|389629662|ref|XP_003712484.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
gi|351644816|gb|EHA52677.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
Length = 888
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 141/313 (45%), Gaps = 20/313 (6%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q L + +S D++F + +LM +G +V KF E N+ Q +
Sbjct: 503 DQHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVIQKFFEHGNQVQKKALA 562
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLMMTKPGS 137
++ + + S + + V+K ++ +V L+ + + R+ K G+
Sbjct: 563 SQMKGK---MVSLSTEMYACRVVQKALEHVLVEQQAELVKELEVEIVRIIKDAN----GN 615
Query: 138 SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 197
V+ + +E F+ + + L+ H GC + +++ + + I+H +
Sbjct: 616 HVVQKIIELVPRQYISFVMDSIRGQVIQLSQHNYGCRVIQRMMEHGSDADKATIMHELHQ 675
Query: 198 NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL----- 252
+A L+ GNYV+QH+++ P + + G V LS K S VV++C+
Sbjct: 676 HAPMLTTDPYGNYVIQHIITHGKPEDRQKVISIVLGQIVLLSKHKLASNVVERCIVSGTA 735
Query: 253 KYQNAVHYIIEEL-LNSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
+ + A+ II ++ LQ + D+Y NYV+Q L + +R Q V +++
Sbjct: 736 EDRTAIRKIITTPGIDGTSPLQLMMKDQYANYVVQKLLEKLNGAER----QAFVEEMKPQ 791
Query: 311 LAALRVMKYGSNV 323
+L+ + G +
Sbjct: 792 FNSLKKVSNGRQI 804
>gi|346971293|gb|EGY14745.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 825
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 20/313 (6%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +S D++F + +LM +G +V KF E N+ Q ++
Sbjct: 435 DQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKFFEHGNQVQKKVLA 494
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLMMTKPGS 137
++ + + S+ + V+K ++ +V L+ + + ++ K + G+
Sbjct: 495 AQMKGK---VVDLSMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVK----DQNGN 547
Query: 138 SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 197
V+ + +E DF+ + LA H GC + ++ ++ IL +
Sbjct: 548 HVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILTELHN 607
Query: 198 NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNA 257
+A L + GNYV QHV+ P + + V LS K S VV+KC+++ +
Sbjct: 608 SAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVEKCIEHGSP 667
Query: 258 VHY--IIEELL----NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
I E+L + LQ + D+YGNYVIQ L + DR + + +++
Sbjct: 668 EERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLLNQLDGADR----EAFIEEMKPQ 723
Query: 311 LAALRVMKYGSNV 323
AL+ G +
Sbjct: 724 FIALKKTSTGRQI 736
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 114 PLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGC 173
PL HV + R K K SV+L+ S + + H + + + G
Sbjct: 383 PLTGHVPA---RPAKDQDSGKGVRSVLLEEFRSSSKSNKRYDLKDIYGHVVEFSGDQHGS 439
Query: 174 INLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRG 233
+ ++ + QI I NA L + GNYV+Q + + ++G
Sbjct: 440 RFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKFFEHGNQVQKKVLAAQMKG 499
Query: 234 HYVDLSLTKCGSFVVQKCLKYQNAVHYIIE---ELLNSDQ--ILQVANDKYGNYVIQTAL 288
VDLS+ VVQK L+ H ++E EL++ Q I++V D+ GN+V+Q +
Sbjct: 500 KVVDLSMQMYACRVVQKALE-----HVLVEQQAELVDELQPDIVKVVKDQNGNHVVQKVI 554
Query: 289 AETMRQ 294
RQ
Sbjct: 555 ELVPRQ 560
>gi|344232856|gb|EGV64729.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 782
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 149/314 (47%), Gaps = 31/314 (9%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q+ L + +F + ++ELM+ +G +V K+ E + +Q
Sbjct: 448 FTKDQHGSRFIQQKLPHSSEEEKEVIFNEIRVISYELMTDVFGNYVIQKYFEHGSMTQKK 507
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+++ + ++ L S+ +G V++ ++ + + +++ LK + G
Sbjct: 508 ILLESML--GHIYEL-SLQMYGCRVVQRALEALELDGQI--KIITELKNHILICAKDQNG 562
Query: 137 SSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 194
+ VI + +E P N + FI +A +L+ H GC + +++ + + +IL
Sbjct: 563 NHVIQKSIERIPFENVR--FILEALESQVYHLSTHPYGCRVIQRLLEHSDVADQDKILAE 620
Query: 195 ISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY 254
++ L + + GNYV+QH+L + +AI + G V+ S K S V++KC+K+
Sbjct: 621 LNRFIFYLIQDQYGNYVMQHILERGNMVDREAILKVVLGSVVNFSKHKFASNVIEKCIKF 680
Query: 255 ------QNAVHYI--------IEELLNSDQILQVANDKYGNYVIQ---TALAETMRQDRL 297
+ +H + IE++ + + + D+Y NYVIQ + ++ RL
Sbjct: 681 GTFEQRKKILHEVLLGNEDLSIEDVEDDSPLALMMKDQYANYVIQKLVEGFSSKSQEKRL 740
Query: 298 SVHQRLVTKLQQHL 311
LV KL+Q+L
Sbjct: 741 -----LVLKLRQYL 749
>gi|35186936|gb|AAQ84130.1| pumilio protein 1 [Trypanosoma cruzi]
Length = 827
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 8/235 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
AQDQEGS+++Q + S +D LF + L++ +G +V K +E N QLA
Sbjct: 418 FAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLA 477
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ Q+ + L ++ +G ++K I+V+ P L +++ LK + + G
Sbjct: 478 HAATRL--QNNVVSL-TLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 532
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ +C+E + + FI A + LA H GC + + + + + I I
Sbjct: 533 NHVVQKCVEVT-PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCP-DQEEVIFSEIL 590
Query: 197 VNAASLSRHRSGNYVVQHVLS-LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L++ + GNYV+QHVL ++D + + AL+ + + S K S V++K
Sbjct: 591 KCVDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEK 645
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 51/284 (17%)
Query: 44 WVVS---GFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSS 100
W +S G+ E Q G + +ES ++ + +I F+ L L+ D FG+
Sbjct: 406 WRISHILGYAVEFAQDQEGSRFIQRAVESATHDEVDALFHEI-FESPLVLV--TDIFGNY 462
Query: 101 SVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAAL 160
++KL++V L H + L+ L + G VI +C+E D I
Sbjct: 463 VLQKLLEVGNAR--QLAHAATRLQNNVVSLTLQTYGCRVIQKCIEVMPPEGLDII----- 515
Query: 161 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLED 220
+ +KG N A + ++GN+VVQ + +
Sbjct: 516 -------------------LAELKG------------NVAKCIQDQNGNHVVQKCVEV-T 543
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-QNAVHYIIEELLNSDQILQVANDKY 279
P I A G ++L+ G V+Q +++ + I E+L L A D+Y
Sbjct: 544 PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPDQEEVIFSEILKCVDTL--AKDQY 601
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GNYVIQ L +++++ R+ L+ K+ SNV
Sbjct: 602 GNYVIQHVLQHMKDENKVT---RVFNALKDDFYEFSKQKFASNV 642
>gi|71411474|ref|XP_807985.1| pumilio/PUF RNA binding protein 6 [Trypanosoma cruzi strain CL
Brener]
gi|70872096|gb|EAN86134.1| pumilio/PUF RNA binding protein 6, putative [Trypanosoma cruzi]
Length = 827
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 8/235 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
AQDQEGS+++Q + S +D LF + L++ +G +V K +E N QLA
Sbjct: 418 FAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLA 477
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ Q+ + L ++ +G ++K I+V+ P L +++ LK + + G
Sbjct: 478 HAATRL--QNNVVSL-TLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 532
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ +C+E + + FI A + LA H GC + + + + + I I
Sbjct: 533 NHVVQKCVEVT-PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCP-DQEEVIFSEIL 590
Query: 197 VNAASLSRHRSGNYVVQHVLS-LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L++ + GNYV+QHVL ++D + + AL+ + + S K S V++K
Sbjct: 591 KCVDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEK 645
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 51/284 (17%)
Query: 44 WVVS---GFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSS 100
W +S G+ E Q G + +ES ++ + +I F+ L L+ D FG+
Sbjct: 406 WRISHILGYAVEFAQDQEGSRFIQRAVESATHDEVDALFHEI-FESPLVLV--TDIFGNY 462
Query: 101 SVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAAL 160
++KL++V L H + L+ L + G VI +C+E D I
Sbjct: 463 VLQKLLEVGNAR--QLAHAATRLQNNVVSLTLQTYGCRVIQKCIEVMPPEGLDII----- 515
Query: 161 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLED 220
+ +KG N A + ++GN+VVQ + +
Sbjct: 516 -------------------LAELKG------------NVAKCIQDQNGNHVVQKCVEV-T 543
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-QNAVHYIIEELLNSDQILQVANDKY 279
P I A G ++L+ G V+Q +++ + I E+L L A D+Y
Sbjct: 544 PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPDQEEVIFSEILKCVDTL--AKDQY 601
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GNYVIQ L +++++ R+ L+ K+ SNV
Sbjct: 602 GNYVIQHVLQHMKDENKVT---RVFNALKDDFYEFSKQKFASNV 642
>gi|407834788|gb|EKF99041.1| pumilio protein, putative [Trypanosoma cruzi]
Length = 827
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 8/235 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
AQDQEGS+++Q + S +D LF + L++ +G +V K +E N QLA
Sbjct: 418 FAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLA 477
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ Q+ + L ++ +G ++K I+V+ P L +++ LK + + G
Sbjct: 478 HAATRL--QNNVVSL-TLQTYGCRVIQKCIEVMP--PEGLDIILAELKGNVAKCIQDQNG 532
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ V+ +C+E + + FI A + LA H GC + + + + + I I
Sbjct: 533 NHVVQKCVEVT-PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCP-DQEEVIFSEIL 590
Query: 197 VNAASLSRHRSGNYVVQHVLS-LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+L++ + GNYV+QHVL ++D + + AL+ + + S K S V++K
Sbjct: 591 KCVDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEK 645
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 51/284 (17%)
Query: 44 WVVS---GFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSS 100
W +S G+ E Q G + +ES ++ + +I F+ L L+ D FG+
Sbjct: 406 WRISHILGYAVEFAQDQEGSRFIQRAVESATHDEVDALFHEI-FESPLVLV--TDIFGNY 462
Query: 101 SVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAAL 160
++KL++V L H + L+ L + G VI +C+E D I
Sbjct: 463 VLQKLLEVGNAR--QLAHAATRLQNNVVSLTLQTYGCRVIQKCIEVMPPEGLDII----- 515
Query: 161 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLED 220
+ +KG N A + ++GN+VVQ + +
Sbjct: 516 -------------------LAELKG------------NVAKCIQDQNGNHVVQKCVEV-T 543
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY-QNAVHYIIEELLNSDQILQVANDKY 279
P I A G ++L+ G V+Q +++ + I E+L L A D+Y
Sbjct: 544 PQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPDQEEVIFSEILKCVDTL--AKDQY 601
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GNYVIQ L +++++ R+ L+ K+ SNV
Sbjct: 602 GNYVIQHVLQHMKDENKVT---RVFNALKDDFYEFSKQKFASNV 642
>gi|123454731|ref|XP_001315116.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121897783|gb|EAY02893.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 410
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 23/282 (8%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+A+D++ LQE + D +F V+ +L+ F+ K E NE Q
Sbjct: 94 MAKDRQDCIMLQEQIDHATPAERDTIFNVLYPHMGDLVCDGAANFLIQKLCEYLNEEQQT 153
Query: 77 LIILKITFQDQLFLLASVDKF-----GSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
++ F + V + G ++K I+ P + + AL F L
Sbjct: 154 RMLA--------FFMEDVQRIVDHPNGCRVLQKFIESTTS-PSNIDPIFLALLPRFVELC 204
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
++ G+ + + + D I + H L GC + D + +
Sbjct: 205 SSQNGNHIAQRFIIKIPQRVPDIINKIKT-HVYDLVVDNWGCRVIQQLFDRLPIQELIPL 263
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + A +L+ ++ GNYVVQ++L+ P I A+ A GH+ + S+ K S V++KC
Sbjct: 264 VDEVLCRAETLATNQFGNYVVQNILNSGTPEHIQALIDAFTGHFYEFSMHKFASNVIEKC 323
Query: 252 LKYQNA--VHYIIEELL------NSDQILQVANDKYGNYVIQ 285
++ N + I E++ N +I ++ +D++GNYVIQ
Sbjct: 324 IRKANPQQQNMIFTEIIGPEGNYNRPRIKEMVSDQFGNYVIQ 365
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
Query: 160 LEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLISVNAASLSRHRSGNYVVQHVLSL 218
+E + H GC L FI++ S I + L ++GN++ Q + +
Sbjct: 160 MEDVQRIVDHPNGCRVLQKFIESTTSPSNIDPIFLALLPRFVELCSSQNGNHIAQRFI-I 218
Query: 219 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC---LKYQNAVHYIIEELLNSDQILQVA 275
+ P + I ++ H DL + G V+Q+ L Q + + E L ++ + A
Sbjct: 219 KIPQRVPDIINKIKTHVYDLVVDNWGCRVIQQLFDRLPIQELIPLVDEVLCRAETL---A 275
Query: 276 NDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+++GNYV+Q L + Q L+ H + K+ SNV
Sbjct: 276 TNQFGNYVVQNILNSGTPEHI----QALIDAFTGHFYEFSMHKFASNV 319
>gi|409082310|gb|EKM82668.1| hypothetical protein AGABI1DRAFT_53014, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 394
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 145/327 (44%), Gaps = 53/327 (16%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWV----VSGFTFELMSGQYGRFVFGKFIES 69
+ + DQ GS+++Q L LDK+ V V + +LM +G +V K ++
Sbjct: 96 IVEFSTDQYGSRFIQTKLEGAG---LDKIRVVYDEIVPLYAMKLMQDVFGNYVIQKLMDF 152
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKV---------VAHLPPLLYHVM 120
+ Q A L ++++ L S++ +G V+K+I++ V + P HV+
Sbjct: 153 GTQDQRAG--LARLVENEIVDL-SLNVYGCRVVQKVIELCTAEQQTQLVRKIEP---HVL 206
Query: 121 SALKR------LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
+ +K + KF+M P L+ AA + LA H GC
Sbjct: 207 TVVKDTNGNHVIQKFVMTVSPERLSFLRTFR-----------DAARQ----LAIHPYGCR 251
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
L ++ + + ++ + A SL + + GNYVVQ++L P I ++G
Sbjct: 252 VLQRCLEYLPNDYCRGMIDELHGIADSLMQDQFGNYVVQYILQHGQPHDCVIIAAQMKGS 311
Query: 235 YVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLN----SDQILQVANDKYGNYVIQTAL 288
+ +S K S VV+K L N +++E+L D + + D YGNYVIQTAL
Sbjct: 312 VLKMSRHKFASNVVEKVLVNANPETRFKLVDEILTIEHGVDPVHALMMDAYGNYVIQTAL 371
Query: 289 AETMRQDRLSVHQRLVTKLQQHLAALR 315
+ + R + L +++ HL +++
Sbjct: 372 NQVDSEQR----ELLYARVRSHLISIK 394
>gi|429848383|gb|ELA23874.1| mRNA binding protein pumilio [Colletotrichum gloeosporioides Nara
gc5]
Length = 853
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 32/295 (10%)
Query: 13 DLFS----LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE 68
D++S + DQ GS+++Q+ L + +S D++F + +LM +G +V KF E
Sbjct: 465 DIYSHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFE 524
Query: 69 SCNE-------SQLALIILKITFQDQLFLLASVDK-FGSSSVKKLIKVVAHLPPLLYHVM 120
N+ SQ+ ++ ++ Q++ V K V++ ++V L P + V+
Sbjct: 525 HGNQVQKKVLASQMKGKVVDLSM--QMYACRVVQKALEHVLVEQQAELVKELEPEIVKVV 582
Query: 121 SALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
G+ V+ + +E H +FI + LA H C + +
Sbjct: 583 KDQN-----------GNHVVQKIIELVPRHYINFIMDSFRGQVSTLASHMYACRVIQRML 631
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSL 240
+ ++ IL + + SL + GNYVVQH++ P I + V LS
Sbjct: 632 EYGTEQDKETILGELHNSTQSLITDQYGNYVVQHIIEHGKPEDRSRIIQLVISQLVTLSK 691
Query: 241 TKCGSFVVQKCLKYQNAVHY------IIEELLNSDQILQ-VANDKYGNYVIQTAL 288
K S VV+KC+++ A I + + LQ + D+YGNYVIQ L
Sbjct: 692 HKFASNVVEKCIQFGTAEERKGIREQITSQASDGTSSLQLMMKDQYGNYVIQKLL 746
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 204 RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYI 261
+ ++GN+VVQ ++ L I+ I + RG L+ V+Q+ L+Y + I
Sbjct: 583 KDQNGNHVVQKIIELVPRHYINFIMDSFRGQVSTLASHMYACRVIQRMLEYGTEQDKETI 642
Query: 262 IEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 321
+ EL NS Q L D+YGNYV+Q + +DR + Q ++++ L L K+ S
Sbjct: 643 LGELHNSTQSL--ITDQYGNYVVQHIIEHGKPEDRSRIIQLVISQ----LVTLSKHKFAS 696
Query: 322 NV 323
NV
Sbjct: 697 NV 698
>gi|426200142|gb|EKV50066.1| hypothetical protein AGABI2DRAFT_199387 [Agaricus bisporus var.
bisporus H97]
Length = 423
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 145/327 (44%), Gaps = 53/327 (16%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWV----VSGFTFELMSGQYGRFVFGKFIES 69
+ + DQ GS+++Q L LDK+ V V + +LM +G +V K ++
Sbjct: 96 IVEFSTDQYGSRFIQTKLEGAG---LDKIRVVYDEIVPLYAMKLMQDVFGNYVIQKLMDF 152
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKV---------VAHLPPLLYHVM 120
+ Q A L ++++ L S++ +G V+K+I++ V + P HV+
Sbjct: 153 GTQDQRAG--LARLVENEIVDL-SLNVYGCRVVQKVIELCTAEQQTQLVRKIEP---HVL 206
Query: 121 SALKR------LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
+ +K + KF+M P L+ AA + LA H GC
Sbjct: 207 TVVKDTNGNHVIQKFVMTVSPERLSFLRTFR-----------DAARQ----LAIHPYGCR 251
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
L ++ + + ++ + A SL + + GNYVVQ++L P I ++G
Sbjct: 252 VLQRCLEYLPNDYCRGMIDELHGIADSLMQDQFGNYVVQYILQHGQPHDCVIIAAQMKGS 311
Query: 235 YVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLN----SDQILQVANDKYGNYVIQTAL 288
+ +S K S VV+K L N +++E+L D + + D YGNYVIQTAL
Sbjct: 312 VLKMSRHKFASNVVEKVLVNANPETRFKLVDEILTIEHGVDPVHALMMDAYGNYVIQTAL 371
Query: 289 AETMRQDRLSVHQRLVTKLQQHLAALR 315
+ + R + L +++ HL +++
Sbjct: 372 NQVDSEQR----ELLYARVRSHLISIK 394
>gi|378756380|gb|EHY66404.1| hypothetical protein NERG_00044 [Nematocida sp. 1 ERTm2]
Length = 461
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 142/313 (45%), Gaps = 24/313 (7%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
++++DQEGS+++Q+ L + + F + + +L++ +G +V KF+E Q
Sbjct: 150 AISKDQEGSRFIQKKLDGASAEEIAMTFEEICPWIGDLIADLFGNYVVQKFLEIGTHEQR 209
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
I + + + ++ +G ++K ++ + ++ +K L+ +
Sbjct: 210 EKI---FSAMEGTIIPLALHMYGCRVIQKALEC----KDINRKIVERIKGHVIDLVCDQN 262
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ V+ +C+E +DF+ + E + L+ H GC + +N ++ + I
Sbjct: 263 GNHVVQKCVECV---DSDFVIKEFEEDAVSLSRHRYGCRVIQRIFEN--STKCASAIDKI 317
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL--K 253
NA L + GNYV+QH+L I L + + S K S V++KC+
Sbjct: 318 ISNAKLLVEDQYGNYVIQHILEKGTHAHKRKIITDLSDNIAEYSTHKFASNVMEKCVICG 377
Query: 254 YQNAVHYIIEELLNS------DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKL 307
+++++L ++ D ++ + DK+GNYVIQ L D+ + L+ L
Sbjct: 378 TMEDRKHMLKQLKSAVGPSGEDMLIHITMDKFGNYVIQRLLDVLTGADK----EVLMAHL 433
Query: 308 QQHLAALRVMKYG 320
+ +++ L+ Y
Sbjct: 434 KANISDLKKSSYA 446
>gi|378730303|gb|EHY56762.1| hypothetical protein HMPREF1120_04829 [Exophiala dermatitidis
NIH/UT8656]
Length = 907
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 143/322 (44%), Gaps = 18/322 (5%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ S+++Q L + +S +++F + +LM+ +G +V K E
Sbjct: 546 NH-VVEFSGDQHASRFIQLKLETANSDEKEQIFKEIQPNVLQLMTDVFGNYVIQKLFEHG 604
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFK 128
N++Q + ++ L S+ +G V+K + L+ + +++ K
Sbjct: 605 NQAQKKALANQMKGH---VLQLSMQMYGCRVVQKAFDHVLTDQQASLVKELDGPNQQILK 661
Query: 129 FLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
+ G+ V+ + +E FI A L ++ H+ GC + +++ + +
Sbjct: 662 VVKDNN-GNHVVQKAIERIPGEHIQFIVDAHRGQMLKMSTHQYGCRVVQRMLEHCRPEAK 720
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
+ IL + + L GNYVVQH++ +P + + H + S K S +V
Sbjct: 721 RAILDELLEHTLPLISDSFGNYVVQHIIQNGEPHDRRRVVDVVLQHVLAFSKHKFASNIV 780
Query: 249 QKCLKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
+K +++ +A I+ L D+ + + D+YGNYV+Q + + ++ LS
Sbjct: 781 EKSIEHADADQRSQILHTLTAPDEQGNTPVFGLMKDQYGNYVLQK-VHDQLQGAELSA-- 837
Query: 302 RLVTKLQQHLAALRVMKYGSNV 323
L ++++ ALR YG V
Sbjct: 838 -LREDMKRNFPALRRTSYGKQV 858
>gi|440300551|gb|ELP92998.1| pumilio, putative [Entamoeba invadens IP1]
Length = 427
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 135/299 (45%), Gaps = 14/299 (4%)
Query: 12 HDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
H+ +L +DQ+GS+ +Q+ + + L ++F ++ +L +G +V K +E
Sbjct: 111 HNFQTLCKDQQGSRKIQQFIEAATDDELSQIFIIIQPAILDLTIDLFGNYVVQKLLEYGP 170
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
+ + +I+ + S++ +G ++K++ V+ L V +K +
Sbjct: 171 PKLIVDVFKQISGS---IVRLSLNTYGCRVIQKMLDVLPS--SCLQDVADEMKSNVVLFI 225
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
+ G+ VI + ++ FI + E + + H GC + I+ K +
Sbjct: 226 EDQNGNHVIQKFIDAIPEIGLGFIIKEIKEKVVDFSKHAYGCRVVQRLIE--KAAFLPIA 283
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
LI N LS ++ GNYV+QH++ + AI ++G + ++ K S VV+KC
Sbjct: 284 GKLIE-NVWDLSVNQYGNYVIQHLVQHGNNSQRVAIVKNIKGKLYEYAMKKYSSNVVEKC 342
Query: 252 LK--YQNAVHYIIEELL----NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
L+ + + ++EL + D++ ++ D Y NYV+Q + R S ++ +
Sbjct: 343 LRCCEEKEQNVFVDELFRMEGDGDKVKEMVCDAYANYVVQRIVEMMTDNQRESFFKKFI 401
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 146 PSYNHKNDFIYQAALEHCLYLACHEQ-GCINLNNFIDNMKGSRRKQILHLISVNAASLSR 204
PS+ KN H C +Q G + FI+ QI +I L+
Sbjct: 99 PSFQKKN----VKGKPHNFQTLCKDQQGSRKIQQFIEAATDDELSQIFIIIQPAILDLTI 154
Query: 205 HRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYII 262
GNYVVQ +L P LI + + G V LSL G V+QK L + + +
Sbjct: 155 DLFGNYVVQKLLEYGPPKLIVDVFKQISGSIVRLSLNTYGCRVIQKMLDVLPSSCLQDVA 214
Query: 263 EELLNSDQILQVANDKYGNYVIQ 285
+E+ ++ ++ D+ GN+VIQ
Sbjct: 215 DEMKSN--VVLFIEDQNGNHVIQ 235
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 48/271 (17%)
Query: 53 LMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHL 112
L Q G +FIE+ + +L+ I + I L ++D FG+ V+KL++ +
Sbjct: 116 LCKDQQGSRKIQQFIEAATDDELSQIFIIIQ---PAILDLTIDLFGNYVVQKLLE---YG 169
Query: 113 PPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQG 172
PP L ++ K++ GS V L+ + G
Sbjct: 170 PPKL--IVDVFKQI--------SGSIV-------------------------RLSLNTYG 194
Query: 173 CINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
C + +D + S + + + N ++GN+V+Q + + I ++
Sbjct: 195 CRVIQKMLDVLPSSCLQDVADEMKSNVVLFIEDQNGNHVIQKFIDAIPEIGLGFIIKEIK 254
Query: 233 GHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETM 292
VD S G VVQ+ ++ + A I +L+ + + ++ ++YGNYVIQ +
Sbjct: 255 EKVVDFSKHAYGCRVVQRLIE-KAAFLPIAGKLI--ENVWDLSVNQYGNYVIQHLVQHGN 311
Query: 293 RQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
R+++ + + KL ++ A++ KY SNV
Sbjct: 312 NSQRVAIVKNIKGKLYEY--AMK--KYSSNV 338
>gi|123432416|ref|XP_001308417.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121890096|gb|EAX95487.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 399
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 24/281 (8%)
Query: 18 AQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 77
A+D S+ LQ+ ++ + LD +F + EL+ Q FV K E+ E Q
Sbjct: 85 ARDPMKSRSLQKKMTECSKQELDIIFNSLYPSLNELVFDQSANFVIQKLCETATEEQQQK 144
Query: 78 IILKITFQDQLFLLASVDKFGSSSV-----KKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ F L+ ++ S+ ++ I+ + + +ALK L +
Sbjct: 145 FLK--------FFLSDLNNIVDHSIACRVLQRFIETTQK--ENIEKLFNALKPNLMSLCL 194
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
++ G+ ++ Q S K + I A L + LA GC + D K + + I+
Sbjct: 195 SQNGNHIV-QRFVMSLPSKLNVIIDAILPSVVPLAIDNCGCRIVQRLFDQYKIEQLESIV 253
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ NA L+ ++ GNYVVQ++L+ I + A +G + SL K S V++KC+
Sbjct: 254 AEVMRNAVELATNQYGNYVVQYILASNKHEHISNLLKAFKGRFYQFSLHKFASNVIEKCI 313
Query: 253 K--YQNAVHYIIEELL------NSDQILQVANDKYGNYVIQ 285
+ + I E++ N+ +I + D++GNYVIQ
Sbjct: 314 RGASEEERMEIFPEIIGSAPDFNATRISTMVEDQFGNYVIQ 354
>gi|145509346|ref|XP_001440614.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407837|emb|CAK73217.1| unnamed protein product [Paramecium tetraurelia]
Length = 648
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 148/319 (46%), Gaps = 16/319 (5%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ + + Q GS+ +Q+ ++ LD+L + +LM Y ++FG +SC
Sbjct: 334 NVVNFVKTQHGSRLIQKYFTTCTQIELDQLLQEIGPHLPDLMIDPYANYMFGSLSQSCAP 393
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q L IL+ T ++L +A DK G+ +++ L+ +++ V +++K L +
Sbjct: 394 HQ-RLYILQ-TIGNRLVDIA-CDKKGTHAIQSLVSLIS-CKQEEEMVENSIKNNIIPLTL 449
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-- 190
G+ +I + + + ++I+ ++ + + H+ G L + I K + K
Sbjct: 450 DSQGTHLIKKIIARFSEDRLNYIFHKLMDRFIQVVNHQFGLCVLKDLITKFKNNLEKSAI 509
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
I++ + + + + GNY VQHV+ + + I + + LS+ K S VV+K
Sbjct: 510 IINRMKDHLDEIIQDPFGNYGVQHVIDVYGDLRCNCIIDKILLKLIQLSIHKYSSNVVEK 569
Query: 251 CL--KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
C+ I++L L++ +K+G +V+Q AL E D+LS L L
Sbjct: 570 CILETSPKTQKRFIKQLSQDIICLELMKNKFGTFVLQKALQEA---DKLSETDSLQQALY 626
Query: 309 QHLAALRVMKYGSNVY-KW 326
++L ++ Y N+ KW
Sbjct: 627 RNLPSI----YAQNIRQKW 641
>gi|440301750|gb|ELP94136.1| meiotic coiled-coil protein, putative [Entamoeba invadens IP1]
Length = 443
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 148/323 (45%), Gaps = 26/323 (8%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
N+ + L ++Q+GS+ +Q L + + ++F + G F+LM +G +V KFIE
Sbjct: 127 NNYTVADLCKEQQGSRRIQAFLQTAKEYEVTEIFDSLKGDLFDLMLDLFGNYVVQKFIEV 186
Query: 70 CNESQLA----LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKR 125
E L+ KI ++ S +G ++K+++ + + ++
Sbjct: 187 GVEKHRQYVRDLVKCKI-------IMLSKHMYGCRVIQKIVEYSSS--EQQEELFQKIEG 237
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
+ L++ + G+ V+ + +E Y+ + + ++ H GC + I+
Sbjct: 238 EVRDLIVDQNGNHVVQKFVE-KYDGCGGRVIDIIKDDIELISSHGFGCRVIQRLIEKSDT 296
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ I + + N LS ++ GNYV+QH+L + D I ++ + + SL K S
Sbjct: 297 TINTIIYNKVRGNIQVLSMNQFGNYVIQHLLEFGSQPIRDEIISEVQDIFCESSLMKFSS 356
Query: 246 FVVQKCLKYQNAV--HYIIEELL--NSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQ 301
V++KC+++ ++ +I ++ N+D ++ + + + NYV+Q L + DR +
Sbjct: 357 NVMEKCVQFGSSEKQRVLIGKVFSCNADSVVSMMKNPFANYVLQRMLTVMNKDDRTKFNA 416
Query: 302 RLVTKLQQHLAALRVMKYGSNVY 324
+ Q+++ LR NVY
Sbjct: 417 NFI---QKNVVMLR-----KNVY 431
>gi|302410901|ref|XP_003003284.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261358308|gb|EEY20736.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
Length = 852
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 139/313 (44%), Gaps = 20/313 (6%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++Q+ L + +S D++F + +LM +G +V KF E N Q+ +
Sbjct: 462 DQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKFFEHGN--QVQKKV 519
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIK--VVAHLPPLLYHVMSALKRLFKFLMMTKPGS 137
L + ++ L S+ + V+K ++ +V L+ + + ++ K + G+
Sbjct: 520 LAAQMKGKVVDL-SMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVK----DQNGN 574
Query: 138 SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 197
V+ + +E DF+ + LA H GC + ++ ++ IL +
Sbjct: 575 HVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILTELHN 634
Query: 198 NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNA 257
+A L + GNYV QHV+ P + + V LS K S VV+KC+++ +
Sbjct: 635 SAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVEKCIEHGSP 694
Query: 258 VHY--IIEELL----NSDQILQ-VANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQH 310
I E+L + LQ + D+YGNYVIQ L + DR + + +++
Sbjct: 695 EERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLLNQLDGGDR----EAFIEEMKPQ 750
Query: 311 LAALRVMKYGSNV 323
AL+ G +
Sbjct: 751 FIALKKTSTGRQI 763
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 10/162 (6%)
Query: 138 SVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 197
SV+L+ S + + H + + + G + ++ + QI I
Sbjct: 431 SVLLEEFRSSSKSNKRYDLKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEP 490
Query: 198 NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNA 257
NA L + GNYV+Q + + ++G VDLS+ VVQK L+
Sbjct: 491 NAVQLMKDVFGNYVIQKFFEHGNQVQKKVLAAQMKGKVVDLSMQMYACRVVQKALE---- 546
Query: 258 VHYIIE---ELLNSDQ--ILQVANDKYGNYVIQTALAETMRQ 294
H ++E EL++ Q I++V D+ GN+V+Q + RQ
Sbjct: 547 -HVLVEQQAELVDELQPDIVKVVKDQNGNHVVQKVIELVPRQ 587
>gi|332254530|ref|XP_003276382.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1 [Nomascus
leucogenys]
Length = 1222
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 136/325 (41%), Gaps = 32/325 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ +QDQ GS+++ + +F + + LM +G +V KF E +
Sbjct: 889 IMEFSQDQHGSRFISXKMERATPAERQLVFNEILQAAYPLMVDVFGHYVIQKFFEFGSLE 948
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPPLLYHVMSALKRLF 127
Q + +I L ++ +G ++K ++ + + L HV+ +K
Sbjct: 949 QKLALAERIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--- 1002
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ V+ +C+E FI A L+ H GC + +++ +
Sbjct: 1003 -----DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1057
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
IL + + L + + GNYV+QHVL P I +RG+ + LS K S V
Sbjct: 1058 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1117
Query: 248 VQKCLKYQNAVHY--IIEELLNSDQILQVA-----NDKYGNYVIQTALAETMRQDRLSVH 300
V+KC+ + + +I+E+ + A D+Y NYV+Q + D
Sbjct: 1118 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMI------DVAEPG 1171
Query: 301 QRLVT--KLQQHLAALRVMKYGSNV 323
QR + K++ H+A LR YG ++
Sbjct: 1172 QRKIVMHKIRPHIATLRKYTYGKHI 1196
>gi|299753403|ref|XP_001833252.2| pumilio [Coprinopsis cinerea okayama7#130]
gi|298410285|gb|EAU88525.2| pumilio [Coprinopsis cinerea okayama7#130]
Length = 461
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 138/300 (46%), Gaps = 32/300 (10%)
Query: 18 AQDQEGSQYLQENLSSGDSRILDKLFW--VVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
++DQ S+++Q+ + D+ LD L W V S + G +V K ++ +E+Q
Sbjct: 124 SRDQRASRFIQQVIEDADTDALD-LIWSEVASDDLLTISFNACGNYVVQKLLDRGSEAQR 182
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMS--ALKRLFKFLMMT 133
+ L Q + + S D +G ++K++ VV + HV L+ L +
Sbjct: 183 --VKLATALQGHVVQV-SQDAYGCWVIQKVLDVVPN------HVRGQIVLEAEPHILTLV 233
Query: 134 KP--GSSV---ILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 188
K G+ V ILQ + Y D + A+E +A GC L + ++
Sbjct: 234 KDPNGNHVVQKILQVVPARYLTFVDAFHGRAVE----IARDNYGCRVLQRCLQHLPFEAV 289
Query: 189 KQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
+ +L + + + GNYV+QH+L + I +RG + L+ K S V+
Sbjct: 290 QPLLQELKPFILEMICDQFGNYVIQHILQDGKTSEKEEIFHQIRGRVLRLARHKYASNVL 349
Query: 249 QKCLKYQNAV--HYIIEELLNSDQ-----ILQVANDKYGNYVIQTA--LAETMRQDRLSV 299
+K L + + H IIEE+L + + + Q+ ND+YGNYV+Q A LAE ++ LS+
Sbjct: 350 EKALTHAPPLIRHAIIEEMLTTVKGFPKGVWQLMNDQYGNYVLQKALTLAEEPQRTVLSM 409
>gi|67476332|ref|XP_653769.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470752|gb|EAL48383.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702739|gb|EMD43320.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 435
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 29/242 (11%)
Query: 82 ITFQDQLFLLASVDKFGSSSVK---------KLIKVVAH---------LPPLL----YHV 119
IT + ++L + +FGS +K L+K H + P + +
Sbjct: 166 ITHPNGQYVLPKIVEFGSEEIKDNVFGVVADNLVKYCCHQFGGYTVQKIAPFMRERHIQI 225
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNN 178
S + R +++ P ++ ++Q L +N KN + L+ C+ ++ + GC L +
Sbjct: 226 WSPILRNNISILVIDPHANYVIQTLLKIFNEKNSNFFYGGLKDCVVRISKTKIGCSVLTH 285
Query: 179 FIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDL 238
IDN + I + N L + + GN+V+QH++ DP +I I ++ V
Sbjct: 286 AIDNSTIQQINLIKPQLLSNCCDLIQDQYGNFVIQHLME-NDPTIISDIIQKIKDDVVFY 344
Query: 239 SLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVANDKYGNYVIQT---ALAETMR 293
S K S VV+KCLK +N +++ L + + + D+YGN+VIQ AL E +
Sbjct: 345 SKQKFSSNVVEKCLKCSTENERQPLLDILSQPESLDALVEDQYGNFVIQAFLDALPEKTK 404
Query: 294 QD 295
++
Sbjct: 405 EE 406
>gi|300123698|emb|CBK24970.2| unnamed protein product [Blastocystis hominis]
Length = 389
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 56/296 (18%)
Query: 51 FELMSGQYGRFVFGKFIESCNES-QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV 109
+E+ + G F F I+ ES +L II+K L SV G+ + + +I
Sbjct: 122 YEISVKKTGNFAFQNIIDYMKESAKLGQIIVKA-------LQHSVVNSGTGATEDVI--- 171
Query: 110 AHLPPLLY----HVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY 165
LP + + HV+ + + F + T IY LE C
Sbjct: 172 --LPLIEHERGTHVIQRIIKTFDISLWTP--------------------IYSILLEKCYD 209
Query: 166 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF--- 222
+A G + L + R++ + +I +A LS GNYVVQH+L L D +
Sbjct: 210 VARDRNGSMVLRLCYGQVDIDRKEDLARVIIQHAKDLSADPVGNYVVQHILMLPDAYSEE 269
Query: 223 -------LIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAV----HYIIEELLNSDQI 271
+I I L GHY++LS K S VV+K + N+V + I ELL +
Sbjct: 270 KLARYYSIIRGILSKLAGHYLELSKQKYSSNVVEKSIT--NSVMLGDNTIFRELLTVSAV 327
Query: 272 LQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVY-KW 326
Q+ ++ YG +V+Q L Q + +R + +++ L R M G N++ KW
Sbjct: 328 QQLLDNHYGMFVLQKLLQSIPPQWSKEI-ERQMKDIEKQLKGGR-MGNGPNLFEKW 381
>gi|344234446|gb|EGV66316.1| hypothetical protein CANTEDRAFT_118702 [Candida tenuis ATCC 10573]
Length = 453
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 148/309 (47%), Gaps = 44/309 (14%)
Query: 13 DLFSLAQDQEGSQYLQ----ENLSSGDS---RILDKLFWVVSGFTFELMSGQYGRFVFGK 65
D+ L++DQ G ++LQ ENL S S + +F + +EL+ +G ++ K
Sbjct: 93 DILRLSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFGNYLIQK 152
Query: 66 FIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKR 125
I+ + L L++ Q LF + S+++ G+ +++K+I+ + P L + S LK
Sbjct: 153 LIKYASNENLNLML--DILQSNLFQI-SINQHGTRALQKIIESLNS-PYQLDLLTSGLKP 208
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
L+ G+ VI + L + FIY + L + +A H+ GC L ++++
Sbjct: 209 FIIELIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHGCCVLQKCLNHVTY 268
Query: 186 SRRKQILHLI--SVNAASLSRHRSGNYVVQHVLSLED-----PFLIDAICFALRGHYVDL 238
+ Q ++ I N L + GNYV+Q+++S+ D F + + F + HY +L
Sbjct: 269 KQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFYSNLVRFDMI-HYCNL 327
Query: 239 SLTKCGSFVVQKCLK------YQN-------------AVHYIIEELLNSDQILQVANDKY 279
K S V++K +K ++N VH+I++ S + ++ ND +
Sbjct: 328 ---KFSSNVIEKFIKNCANNEFKNNEVNIDFVNLKFEMVHHILKT---SASLNKLINDPF 381
Query: 280 GNYVIQTAL 288
GNYVIQT +
Sbjct: 382 GNYVIQTLI 390
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 202 LSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVH 259
L + +GN+V+Q +L+ P I ++ + ++ K G V+QKCL + ++
Sbjct: 213 LIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHGCCVLQKCLNHVTYKQLN 272
Query: 260 YIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKY 319
+ E+LN + ++ ND++GNYV+Q ++ Q + LV H L K+
Sbjct: 273 QFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFYSNLVRFDMIHYCNL---KF 329
Query: 320 GSNV 323
SNV
Sbjct: 330 SSNV 333
>gi|340507558|gb|EGR33501.1| pumilio-family RNA binding repeat protein [Ichthyophthirius
multifiliis]
Length = 361
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 16/243 (6%)
Query: 54 MSGQYGRFVFGKFIE--SCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH 111
M Q+G +V KF E S + ++LK D S+ +G V+K I+ +
Sbjct: 1 MKDQFGNYVIQKFFEKGSIQHKNMLFLVLKGKMGD-----LSLHTYGCRVVQKAIEELKD 55
Query: 112 LPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQ 171
P L ++ L + + G+ VI +C E + K FI +++ LA H
Sbjct: 56 FPELQEELLQELNNKIMICIQDQHGNHVIQKCFESINSQKLCFIITEVIQNIDTLAFHPY 115
Query: 172 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFAL 231
GC + ++ + + +I + +N +L + + GNY++Q+++ + + D I +
Sbjct: 116 GCRVIQKILEFCQPNETSKIYENLLINLINLCKCQYGNYIIQYIIEKKPGYNRDNILNVV 175
Query: 232 RGHYVDLSLTKCGSFVVQKCLKYQNAVHY--IIEELLN-------SDQILQVANDKYGNY 282
+ ++V LSL K S V +K L N + ++E L N +++ + +GNY
Sbjct: 176 KQNFVQLSLNKFASNVTEKSLFNSNDDYKMGVLEVLFNQLSNNYLDTGFIKLTKNAFGNY 235
Query: 283 VIQ 285
VIQ
Sbjct: 236 VIQ 238
>gi|171686492|ref|XP_001908187.1| hypothetical protein [Podospora anserina S mat+]
gi|170943207|emb|CAP68860.1| unnamed protein product [Podospora anserina S mat+]
Length = 752
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 22/320 (6%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ + DQ GS+++Q L + +S +++F + LM +G +V KF E N++
Sbjct: 361 IVEFSGDQHGSRFIQNKLETANSDDKNQVFHEIEPNAIVLMKDLFGNYVIQKFFEHGNQA 420
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM- 132
Q +L + ++ L S+ + V+K + V L+ +K L ++
Sbjct: 421 QKQ--VLAAAMKGKVVEL-SMQMYACRVVQKALSHV-----LVEQQAELVKELEPEILTI 472
Query: 133 --TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 190
+ G+ V+ + ++ FI+ L+ H GC + +++ + ++
Sbjct: 473 VKDQNGNHVVQKIIQTVPRQHIGFIFDCFRGRVSELSSHAYGCRVIQRALEHGNEADKQS 532
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
I+ + A L + GNYV QHV++ P + + S K S VV+K
Sbjct: 533 IMKELHSCAQMLIMDQYGNYVTQHVITDGSPDDRSKMVALVMSQLPIFSKHKFASNVVEK 592
Query: 251 CLKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
C+K+ A I + ++ ++ + D++GNYV+QT L+E QDR L
Sbjct: 593 CIKHGTADQQRDIRDRFMSRGDDGNSFLVSLTKDQFGNYVLQTLLSELQGQDR----DVL 648
Query: 304 VTKLQQHLAALRVMKYGSNV 323
V +++ LA+++ M G +
Sbjct: 649 VNEVRPLLASIKKMCTGKQI 668
>gi|189195550|ref|XP_001934113.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979992|gb|EDU46618.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 891
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 28/297 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q+ L + +S + + +F + +LM +G +V KF E ++
Sbjct: 516 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQV 575
Query: 74 QLALIILKIT-----FQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFK 128
Q +++ K+ +Q++ + + + K + H L + +K L K
Sbjct: 576 QKKILVGKMKGHVLELANQMY-----------ACRVVQKALEHA--LTEQQAAMVKELEK 622
Query: 129 FLMMT---KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
++ T + G+ VI + ++ I +A + L+ + GC + ++ ++
Sbjct: 623 DVLKTVKDQNGNHVIQKVIDRVPMQHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVQE 682
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+R+ IL + L + GNYV QHV+ P I ++ ++ S K S
Sbjct: 683 PQRRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVSLIKAQFLMFSKHKFAS 742
Query: 246 FVVQKCL-------KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQD 295
VV++CL + Q + + ++ + D YGNYVIQ L R D
Sbjct: 743 NVVERCLICGDDAQRRQLVAVVLSKNERGETNVMNLLRDGYGNYVIQKLLDTLGRND 799
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 161 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLED 220
+H + A + G + ++ ++ + + NA L + GNYV+Q D
Sbjct: 514 DHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGD 573
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY----QNAVHYIIEELLNSDQILQVAN 276
+ ++GH ++L+ VVQK L++ Q A +++EL +L+
Sbjct: 574 QVQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQAA--MVKEL--EKDVLKTVK 629
Query: 277 DKYGNYVIQTALAETMRQDRLSVH--QRLVTKLQQHLAALRVMKYGSNV 323
D+ GN+VIQ + DR+ + Q++V + ++ L V YG V
Sbjct: 630 DQNGNHVIQKVI------DRVPMQHIQKIVEAFRGNVGVLSVNSYGCRV 672
>gi|443699258|gb|ELT98839.1| hypothetical protein CAPTEDRAFT_180493 [Capitella teleta]
Length = 632
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 18/260 (6%)
Query: 1 LQTIAFEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGR 60
+ + + NH + +QDQ GS+++Q+ L +F + + LM+ +G
Sbjct: 223 IPNLQLKDLANH-VVEFSQDQHGSRFIQQKLERALPAEKSMVFNEILSAAYSLMTDVFGN 281
Query: 61 FVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH------LPP 114
+V KF E Q + ++ + + LA + +G ++K ++ + +
Sbjct: 282 YVIQKFFEFGTSEQKQTLAQRV--RGHVLPLA-LQMYGCRVIQKALESIPSEMQVEIVKE 338
Query: 115 LLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 174
L HV+ +K + G+ V+ +C+E + F+ A L+ H GC
Sbjct: 339 LDGHVLKCVK--------DQNGNHVVQKCIECVEPKQLQFLIDAFKGQVFTLSTHPYGCR 390
Query: 175 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH 234
+ +++ + +L + V+ L + + GNYV+QHVL P I LRG
Sbjct: 391 VIQRILEHCVSEQTNPVLDELHVHTERLVQDQYGNYVIQHVLEHGRPEDKSKIVSELRGR 450
Query: 235 YVDLSLTKCGSFVVQKCLKY 254
+ LS K S VV+KC+ Y
Sbjct: 451 VLVLSQHKFASNVVEKCVTY 470
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 18/195 (9%)
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI + E + + + Q H L LA GC + ++++ + +I+ +
Sbjct: 280 GNYVIQKFFEFGTSEQKQTLAQRVRGHVLPLALQMYGCRVIQKALESIPSEMQVEIVKEL 339
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
+ + ++GN+VVQ + +P FLIDA +G LS G V+Q+
Sbjct: 340 DGHVLKCVKDQNGNHVVQKCIECVEPKQLQFLIDA----FKGQVFTLSTHPYGCRVIQRI 395
Query: 252 LKY--QNAVHYIIEEL-LNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQ 308
L++ + +++EL +++++++Q D+YGNYVIQ L +D+ ++V++L+
Sbjct: 396 LEHCVSEQTNPVLDELHVHTERLVQ---DQYGNYVIQHVLEHGRPEDK----SKIVSELR 448
Query: 309 QHLAALRVMKYGSNV 323
+ L K+ SNV
Sbjct: 449 GRVLVLSQHKFASNV 463
>gi|9759249|dbj|BAB09773.1| unnamed protein product [Arabidopsis thaliana]
Length = 250
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 33/206 (16%)
Query: 89 FLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSY 148
F++ + +K GS +++KL+ + + + A+ RLF +M K S V +Q +
Sbjct: 33 FMVITTNKNGSKTLQKLMGMSDDMDVFFFE---AIMRLFIHVMTDKYASYVTIQGMRVFQ 89
Query: 149 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 208
K + +Y L + +LA + + LS G
Sbjct: 90 QDKRELMYDQILRYACFLAGDQYALL---------------------------LSNDAYG 122
Query: 209 NYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNA-VHYIIEELL- 266
N+VVQHVL L D I L G+ V+LS K GS++V++ L+ + + ++ +LL
Sbjct: 123 NFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLA 182
Query: 267 -NSDQILQVANDKYGNYVIQTALAET 291
++ ++++A +YGN+V+ AL T
Sbjct: 183 CKTEMLIRLARSEYGNFVVCKALELT 208
>gi|330933813|ref|XP_003304306.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
gi|311319138|gb|EFQ87583.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
Length = 890
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 28/297 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q+ L + +S + + +F + +LM +G +V KF E ++
Sbjct: 515 VVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQV 574
Query: 74 QLALIILK-----ITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFK 128
Q +++ K + +Q++ + + + K + H L + +K L K
Sbjct: 575 QKKILVGKMKGHVLELANQMY-----------ACRVVQKALEHA--LTEQQAAMVKELEK 621
Query: 129 FLMMT---KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 185
++ T + G+ VI + ++ I +A + L+ + GC + ++ ++
Sbjct: 622 DVLKTVKDQNGNHVIQKVIDRVPMQHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVQE 681
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+R+ IL + + L + GNYV QHV+ P I ++ ++ S K S
Sbjct: 682 PQRRFILTELHAEGSKLITDQYGNYVTQHVIEHGLPEDRAKIVSLIKAQFLMFSKHKFAS 741
Query: 246 FVVQKCL------KYQNAVHYIIEELLNSD-QILQVANDKYGNYVIQTALAETMRQD 295
VV++CL + + V ++ + + ++ + D YGNYVIQ L R D
Sbjct: 742 NVVERCLICGDDAQRRELVAVVLSKNERGETNVMNLLRDGYGNYVIQKLLDTLSRND 798
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 161 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLED 220
+H + A + G + ++ ++ + + NA L + GNYV+Q D
Sbjct: 513 DHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGD 572
Query: 221 PFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY----QNAVHYIIEELLNSDQILQVAN 276
+ ++GH ++L+ VVQK L++ Q A +++EL +L+
Sbjct: 573 QVQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQAA--MVKEL--EKDVLKTVK 628
Query: 277 DKYGNYVIQTALAETMRQDRLSVH--QRLVTKLQQHLAALRVMKYGSNV 323
D+ GN+VIQ + DR+ + Q++V + ++ L V YG V
Sbjct: 629 DQNGNHVIQKVI------DRVPMQHIQKIVEAFRGNVGVLSVNSYGCRV 671
>gi|443896502|dbj|GAC73846.1| translational repressor Pumilio/PUF3 [Pseudozyma antarctica T-34]
Length = 944
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 138/330 (41%), Gaps = 56/330 (16%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ GS+++QE L S + LF V +LM+ +G +V K +E ++ Q A++
Sbjct: 603 DQHGSRFIQEKLDSASAEEKKTLFDEVLPHARQLMTDVFGNYVIQKMLEHGDDEQRAVLA 662
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSV 139
++ L S+ +G V+K +A ++L K L
Sbjct: 663 REMEGN---VLSLSLGTYGCRVVQKAFDYIA---------PEQREKLAKEL------DGH 704
Query: 140 ILQCL-EPSYNH------------KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
I+QC+ + + NH + FI +A + H LA H C L ++ +
Sbjct: 705 IMQCVRDQNANHVVQKVIERVDAGEVAFIPEAFVGHVAGLASHCYSCRVLQRAFEHCTEA 764
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ + +L + A +L +H+ GNYV+Q VL P + +RG+ + LS K S
Sbjct: 765 QARPLLDELHHEAYALMQHQYGNYVIQWVLQRGQPNDRAQVIAKIRGNVLTLSRHKFASN 824
Query: 247 VVQKCLKYQNAV--HYIIEELLNSDQILQVA-------------------NDKYGNYVIQ 285
V+++ ++ +A +++E+L Q+ D++ NYV+Q
Sbjct: 825 VIEEVIRTSSAADLDALVDEILTPKQVPSAGADAEAAQQTTKIAPAVLMMKDQFANYVLQ 884
Query: 286 TALAETMRQDRLSVHQRLVTKLQQHLAALR 315
L + R RLV +Q L + R
Sbjct: 885 RFLEKADGAQRA----RLVEAVQPSLLSAR 910
>gi|241950345|ref|XP_002417895.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative;
RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223641233|emb|CAX45613.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative [Candida
dubliniensis CD36]
Length = 982
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 43/324 (13%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG-----DSRI--LDKLFWVVSGFTFELMSGQYGRFVFGK 65
++ LA+DQ G ++LQ+ + R+ + +F + + +EL+ +G ++ K
Sbjct: 288 EILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEVIFNQIYSYVYELIVDPFGNYLIQK 347
Query: 66 FIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV--AHLPPLLYHVMSAL 123
I CNES L L++ Q LF + S+++ G+ +++K+I + +H LL + L
Sbjct: 348 LIVYCNESNLDLLME--ILQYNLFQI-SINQHGTRALQKIIDSLNNSHQLGLL---IKGL 401
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K L+ G+ VI + L FIY + ++ +A H+ GC L ++++
Sbjct: 402 KPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNHV 461
Query: 184 K----GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
G + IL N L + GNYV+Q+++S+ +D I F + ++V+
Sbjct: 462 TLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLISINS---LD-INFQIFQNFVNFG 515
Query: 240 LT-----KCGSFVVQKCLK-----------YQNAVHYIIEELLNSDQILQVANDKYGNYV 283
++ K S VV+K LK + N +I +L SD + + ND YGNYV
Sbjct: 516 ISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSD-LNVLINDPYGNYV 574
Query: 284 IQTALAETMRQDRLSVHQRLVTKL 307
IQT + + M +++ + KL
Sbjct: 575 IQT-MIDIMVNPQVNYQNNNIDKL 597
>gi|260942643|ref|XP_002615620.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
gi|238850910|gb|EEQ40374.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
Length = 780
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 146/323 (45%), Gaps = 30/323 (9%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q+ L S + + +F + +++LM+ +G +V KF E ++SQ
Sbjct: 446 FTKDQHGSRFIQQKLPSATAEEKEMVFSEIQDISYDLMTDVFGNYVIQKFFEFGSDSQRQ 505
Query: 77 LII--LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPL--LYHVMSALKRLFKFLMM 132
+++ +K + S+ +G V++ ++ + PL ++ LK
Sbjct: 506 ILLGYMKGNIHE-----LSLQMYGCRVVQRALEAI----PLEDQIEIVEELKDHVLSCAK 556
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ VI + +E FI + H +L+ H GC + ++ ++ IL
Sbjct: 557 DQNGNHVIQKSIEKIPFENVRFILDSLDSHIYHLSTHPYGCRVIQRLLEYSDIEDQQHIL 616
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
++ L + + GNYV+QH+L P + I V+ S K S V++KC+
Sbjct: 617 AELNRFLFYLIQDQYGNYVIQHILERGTPSEKEEIFEVAFSSIVNFSKHKFASNVIEKCI 676
Query: 253 KYQN--AVHYIIEELLNSDQILQ---VAN---------DKYGNYVIQTALAETMRQDRLS 298
K+ I E++ ++ L+ VA+ D+Y NYVIQ L E +
Sbjct: 677 KHGTLEQRKRIWREVMLGNEDLEKETVADDSPLALMMKDQYANYVIQ-KLVECFHA-KSK 734
Query: 299 VHQRLVTKLQQHLAALRVMK-YG 320
+ LV KL+Q+L L + YG
Sbjct: 735 EKKDLVVKLRQYLKQLSMKNSYG 757
>gi|440302948|gb|ELP95254.1| hypothetical protein EIN_430600 [Entamoeba invadens IP1]
Length = 452
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 21/321 (6%)
Query: 7 EHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKF 66
E+ +++ + DQ G + LQ+ L D +D+++ + L++ Q+G ++ K
Sbjct: 127 ENIDDNEFLKMCCDQFGCRCLQKKLEDDDDDAIDEIYERMLPIMNNLIADQFGNYLCQKL 186
Query: 67 IESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRL 126
IE ++ Q L ILK + + S + G+ SV+K+I + ++S +
Sbjct: 187 IEVVDDEQ-RLDILKCVSNN--IGIISKNIHGTRSVQKMINCATTKAEIDELILSLSPHI 243
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLAC-HEQGCINLNNFID-NMK 184
L+ G+ VI +CL+ +N FI+ L C H+ GC + ID +
Sbjct: 244 VD-LVFDGNGNHVIQECLKTFSKEQNKFIFDGILGDSFVEICEHKHGCCVVQRCIDFGNR 302
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVD----LSL 240
G K + +IS N + GNYVVQ++L ++ +D +C + +D LS
Sbjct: 303 GQLNKLVDKVIS-NTLEIITDPYGNYVVQYILKVD----VDHVCMDVTKIILDDLIVLST 357
Query: 241 TKCGSFVVQKCLKYQN--AVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLS 298
K S V+++ + + ++ L + ++ + NYVIQT L + R+
Sbjct: 358 QKFSSNVIEQLVMSDEVGVKELMFDKFLQYKDVERLLQGSFSNYVIQTCLENSSRE---- 413
Query: 299 VHQRLVTKLQQHLAALRVMKY 319
H +L + H+ +++ + Y
Sbjct: 414 YHVKLSNWILPHIDSIKNISY 434
>gi|414869527|tpg|DAA48084.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 236
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 192
+ G+ VI +C+E F+ A L+ H GC + +++ G+ + Q I+
Sbjct: 24 QNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCII 83
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
I L++ + GNYV QHVL I L G V +S K S V++KC
Sbjct: 84 DEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCF 143
Query: 253 KYQNA------VHYIIEELLNSDQI---LQVANDKYGNYVIQTALAETMRQDRLSVHQRL 303
++ + + I+E+ ++ + L + D+Y NYV+Q L ET +D+ + L
Sbjct: 144 QHGDIAERDLLIRRIVEQTEGNNNLLVCLAMMKDQYANYVVQKIL-ETCNEDQREL---L 199
Query: 304 VTKLQQHLAALRVMKYGSNV 323
+++++ H+ ALR YG ++
Sbjct: 200 LSRVKDHMQALRKYTYGKHI 219
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 183 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTK 242
M+ ++ ++H + + R ++GN+V+Q + I + A +G LS+
Sbjct: 1 MELDQKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHP 60
Query: 243 CGSFVVQKCLKY---QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSV 299
G V+Q+ L++ + II+E+L IL A D+YGNYV Q L +R
Sbjct: 61 YGCRVIQRILEHCGGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKA 112
Query: 300 HQR--LVTKLQQHLAALRVMKYGSNV 323
H+R ++TKL + + KY SNV
Sbjct: 113 HERSQIITKLAGQVVTMSQNKYASNV 138
>gi|353242398|emb|CCA74046.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Piriformospora indica DSM 11827]
Length = 684
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 132/295 (44%), Gaps = 24/295 (8%)
Query: 6 FEHCTNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMS-GQYGRFVF 63
F HC + DQ GS+++Q+ L + S +F V+ F +++ +G +V
Sbjct: 325 FGHCVE-----FSTDQHGSRFIQQKLDTASSDERQAVFDEVIPAGNFSVLAFDVFGNYVI 379
Query: 64 GKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSAL 123
K E S L +L + + L S+D +G V+K + P V+S L
Sbjct: 380 QKLFEYG--SPLHRRLLCSAMEGHVLQL-SLDMYGCRVVQKALDCGT--PQQQAAVVSEL 434
Query: 124 KRLFKFLMMTKPGSSVILQCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 181
+ G+ VI + +E PS + + + A + LA H GC L I+
Sbjct: 435 NGHVLQCVKDANGNHVIQKIMELVPS---QRNVLLDAFSGNVRNLASHPYGCRVLQRSIE 491
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLT 241
+ +L + N++ L + + GNYVVQ++L P D + +LRG+ + ++
Sbjct: 492 HAAPEETASLLEELHQNSSLLMQDQFGNYVVQYILEHGAPAHRDRMIDSLRGNVLSMARH 551
Query: 242 KCGSFVVQKCLKYQNAVHY--IIEELL-----NSDQILQVANDKYGNYVIQTALA 289
K S V +K L N V +IEE+L + + + D+Y NYV+Q A++
Sbjct: 552 KFASNVCEKALLVSNDVQRRALIEEMLAPMSNGTSPVSIMMKDQYANYVLQKAIS 606
>gi|336380323|gb|EGO21476.1| hypothetical protein SERLADRAFT_473873 [Serpula lacrymans var.
lacrymans S7.9]
Length = 360
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 142/317 (44%), Gaps = 34/317 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 78
DQ GS+++Q+ L + S +F +V T +L+ +G +V K E + +Q+
Sbjct: 34 DQHGSRFIQQKLETATSEEKQLMFDEIVPNNTLQLIQDVFGNYVIQKLFE--HGTQVQKT 91
Query: 79 ILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFLMM 132
+L T + + L S+ +G V+K ++ V A + L HV+ +K
Sbjct: 92 VLANTMEGHVLPL-SLQMYGCRVVQKAVEYVLPEQQGAFVKELEPHVLKCVK-------- 142
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + +E + FI + +Y L+ H GC L +++ + + +
Sbjct: 143 DANGNHVIQKLIERVSPERLAFI--NSFRGNVYDLSTHPYGCRVLQRCFEHLPEDQTRPL 200
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
L + +L + + GNYVVQ VL + LRG + ++ K S V +K
Sbjct: 201 LDELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQMARHKFASNVCEKA 260
Query: 252 LKYQNA--VHYIIEELLNS-----DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
L +A +IEE++ I+ + D++ NYV+Q AL + R +RL+
Sbjct: 261 LMTADADSRRILIEEIMTPKADGVSPIVTMMKDQFANYVLQRALGVVEGEQR----ERLM 316
Query: 305 TKLQQHLAALRVMKYGS 321
++ L ++R +Y S
Sbjct: 317 NLVRPQLVSMR--RYSS 331
>gi|336367609|gb|EGN95953.1| hypothetical protein SERLA73DRAFT_111921 [Serpula lacrymans var.
lacrymans S7.3]
Length = 372
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 142/317 (44%), Gaps = 34/317 (10%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 78
DQ GS+++Q+ L + S +F +V T +L+ +G +V K E + +Q+
Sbjct: 46 DQHGSRFIQQKLETATSEEKQLMFDEIVPNNTLQLIQDVFGNYVIQKLFE--HGTQVQKT 103
Query: 79 ILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLFKFLMM 132
+L T + + L S+ +G V+K ++ V A + L HV+ +K
Sbjct: 104 VLANTMEGHVLPL-SLQMYGCRVVQKAVEYVLPEQQGAFVKELEPHVLKCVK-------- 154
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQI 191
G+ VI + +E + FI + +Y L+ H GC L +++ + + +
Sbjct: 155 DANGNHVIQKLIERVSPERLAFI--NSFRGNVYDLSTHPYGCRVLQRCFEHLPEDQTRPL 212
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC 251
L + +L + + GNYVVQ VL + LRG + ++ K S V +K
Sbjct: 213 LDELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQMARHKFASNVCEKA 272
Query: 252 LKYQNA--VHYIIEELLNS-----DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
L +A +IEE++ I+ + D++ NYV+Q AL + R +RL+
Sbjct: 273 LMTADADSRRILIEEIMTPKADGVSPIVTMMKDQFANYVLQRALGVVEGEQR----ERLM 328
Query: 305 TKLQQHLAALRVMKYGS 321
++ L ++R +Y S
Sbjct: 329 NLVRPQLVSMR--RYSS 343
>gi|145538858|ref|XP_001455129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422917|emb|CAK87732.1| unnamed protein product [Paramecium tetraurelia]
Length = 439
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 152/321 (47%), Gaps = 19/321 (5%)
Query: 19 QDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 78
QDQ S +Q++ G+ +K+F + L ++G +V K IE+CN++ LI
Sbjct: 132 QDQYASLSIQQSFIQGNEYQREKIFKGLVDDLLLLSKHKFGNYVIQKIIENCNQNTRTLI 191
Query: 79 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSS 138
++ + L S DKFG V+KL++ + + + ++S +K L+ + G+
Sbjct: 192 FEQL---NSHVLEMSQDKFGCRVVQKLLEFILNQQKV--QLISQIKPYALKLIFDQCGNH 246
Query: 139 VILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISV 197
VI + ++ + +FI + + H GC ++ + +++ + LI +
Sbjct: 247 VIQKIIDLVTDA--EFIIDLVTNNVDKVVSHPYGCRIAQKCLEIFPNDKLQELYISLIPL 304
Query: 198 NAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK--YQ 255
LS + GNY+VQH+++ P + I ++ +++S K GS V ++ +K
Sbjct: 305 -CERLSFCQYGNYIVQHMMNSGPPKGFEVIGKFIKSRIIEVSQDKYGSNVAERYIKLAQD 363
Query: 256 NAVHYIIEELLN---SDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLA 312
+ + I + LLN +L + N+ +GNYV+Q + + + + +L +K ++H
Sbjct: 364 DDIASICKILLNQTVPPMLLILINNSFGNYVMQNFYLKCNDKQKEQIQIQL-SKYEEH-- 420
Query: 313 ALRVMKYGSNVYKWTTASHPC 333
+ ++G + ++ H C
Sbjct: 421 --QFTQFGRHFLQYLARIHAC 439
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 124 KRLFKFLMMTKPGSSVILQC--------LEPSYNHKNDF----IYQAALEHCLYLACHEQ 171
KR K + T+ SS+ QC ++ S+ N++ I++ ++ L L+ H+
Sbjct: 112 KRTKKLQLQTEIDSSISQQCQDQYASLSIQQSFIQGNEYQREKIFKGLVDDLLLLSKHKF 171
Query: 172 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLID----AI 227
G + I+N + R I ++ + +S+ + G VVQ +L F+++ +
Sbjct: 172 GNYVIQKIIENCNQNTRTLIFEQLNSHVLEMSQDKFGCRVVQKLLE----FILNQQKVQL 227
Query: 228 CFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTA 287
++ + + L +CG+ V+QK + +II+ + N+ + +V + YG + Q
Sbjct: 228 ISQIKPYALKLIFDQCGNHVIQKIIDLVTDAEFIIDLVTNN--VDKVVSHPYGCRIAQKC 285
Query: 288 LAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNVYKWTTASHP 332
L E D+L Q L L L +YG+ + + S P
Sbjct: 286 L-EIFPNDKL---QELYISLIPLCERLSFCQYGNYIVQHMMNSGP 326
>gi|449438629|ref|XP_004137090.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 192
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 161 EHCLYLA------CHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQH 214
++CL LA C Q CI +N +N++ + I LI + LS+H GNYV+Q
Sbjct: 10 QNCLELARGQASCCILQECIEYSN--NNLRQLQEVLISPLIQ-DVYDLSKHPYGNYVIQF 66
Query: 215 VLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK----YQNAVHYIIEELLNSDQ 270
++ L+ + I L +V+LS+ K GS VV+KCL N + + I E D+
Sbjct: 67 MIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGISNDIIFEILEGNGRDR 126
Query: 271 ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
++Q+ ++YGN+V+QT ++ + + + L ++ H L+ YG NV
Sbjct: 127 LIQICTNQYGNFVVQTVMSIA----KGKIRKLLEKAIKSHWLVLQQHLYGRNV 175
>gi|168012831|ref|XP_001759105.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689804|gb|EDQ76174.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+F + DQ GS+++Q+ L + + +F V LM+ +G +V KF E +
Sbjct: 1 MFECSADQHGSRFIQQKLETASPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQ 60
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRLF 127
Q + ++ + L S+ +G ++K ++VV + L HVM ++
Sbjct: 61 QRRELASQLV---EHVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR--- 114
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGS 186
+ G+ VI +C+E K FI A + L+ H GC + +++
Sbjct: 115 -----DQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQ 169
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLS 217
++K I+ I + +L++ + GNYVVQHVL
Sbjct: 170 KQKGIMEEILRSTCTLAQDQYGNYVVQHVLE 200
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 7/220 (3%)
Query: 93 SVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNHKN 152
S D+ GS +++ ++ + P V + LM G+ VI + E +
Sbjct: 5 SADQHGSRFIQQKLETAS--PEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQQR 62
Query: 153 DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVV 212
+ +EH L L+ GC + ++ + ++ Q++ + + R ++GN+V+
Sbjct: 63 RELASQLVEHVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGNHVI 122
Query: 213 QHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY---QNAVHYIIEELLNSD 269
Q + P I I A V LS G V+Q+ L++ + I+EE+L S
Sbjct: 123 QKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRST 182
Query: 270 QILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQ 309
L A D+YGNYV+Q L +R + +L ++ Q
Sbjct: 183 CTL--AQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQ 220
>gi|221504265|gb|EEE29940.1| pumilio, putative [Toxoplasma gondii VEG]
Length = 1913
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 22/283 (7%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
A+D + +LQE L + + + + +L Q+G +V KF E+ ++ +
Sbjct: 998 LEFAKDPFAAVFLQEQLETCPLADRVPILFQLLPHALDLAVDQHGNYVLQKFFETGSDKE 1057
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLP-PLLYHVMSALKRLFKFLMMT 133
+ ++T D +F L S++ +G +++ V LP P ++ LK +
Sbjct: 1058 KEWLAAQLT--DHVFRL-SLEVYGCRVIQR---AVESLPVPAQLRLVRELKDHVITCVED 1111
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +C E + FI A ++ H GC + ++ S+ ++
Sbjct: 1112 QHGNHVIQKCAERLPSPSVQFIIDAFKGQEARMSVHSYGCRVIQRLLEACPMSQVAALID 1171
Query: 194 LISVNAASLSRHRSGNYVVQHVLSL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ L R + GNYVVQHVL + +ID +C + + LS K VV+
Sbjct: 1172 VVMAELCMLIRDQFGNYVVQHVLEFGRDADKMKIIDFMCEDI----IALSTEKYACNVVE 1227
Query: 250 KCLKYQ---NAVHYIIEELLNSDQILQ----VANDKYGNYVIQ 285
+ L A II L + + Q V D+YGNYV+Q
Sbjct: 1228 RALTLNAMGRARRRIITAALGPEMMGQPLKMVMLDRYGNYVVQ 1270
>gi|145488749|ref|XP_001430378.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397475|emb|CAK62980.1| unnamed protein product [Paramecium tetraurelia]
Length = 452
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 147/320 (45%), Gaps = 17/320 (5%)
Query: 19 QDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 78
QDQ S +Q++ G+ DK+F + L ++G +V K IE+ N++ LI
Sbjct: 145 QDQYASLNIQQSFIQGNDFQKDKIFKALVDDLPLLSKHKFGNYVIQKIIENSNQNIRTLI 204
Query: 79 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSS 138
++ + DKFG +++L++ + + + ++ ++K L+ + G+
Sbjct: 205 FEQLH---PFIIEMCYDKFGCRVIQRLLEFIQNHQKI--QLIQSIKSQVLNLIFDQCGNH 259
Query: 139 VILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 198
VI + ++ + + +FI + ++ H GC ++ + +Q+ +
Sbjct: 260 VIQKIIDLASDA--EFIIDIVTNNVDHIVSHSYGCRIAQKCLEIFPNQKLQQLYVSLIPL 317
Query: 199 AASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--CLKYQN 256
LS + GNY+VQH+++ P ++ I ++ V++S K S V QK + +
Sbjct: 318 CERLSFCQYGNYIVQHMINQGPPKGLEVIGKYIKARIVEVSQDKYASIVAQKYITVASDD 377
Query: 257 AVHYIIEELLNS---DQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAA 313
+ I + L+N +L + N+++GNYV+Q + + + S+ Q + K + H
Sbjct: 378 DIASICKVLINDCYPPMLLILINNQFGNYVMQNFYQKCNDKQKQSI-QIQINKFEDH--- 433
Query: 314 LRVMKYGSNVYKWTTASHPC 333
+ ++G + ++ H C
Sbjct: 434 -QFTQFGRHFLQFLARCHAC 452
>gi|449300445|gb|EMC96457.1| hypothetical protein BAUCODRAFT_108119 [Baudoinia compniacensis
UAMH 10762]
Length = 340
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 29/297 (9%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
+ A DQ GS+++Q L DS +++F + LM+ +G +V KF E +
Sbjct: 49 IAEFACDQHGSRFIQTKLELADSDEKERVFAEIEPNAIPLMTDVFGNYVIQKFFEHGDLR 108
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKK-----LIKVVAHL-PPLLYHVMSALKRLF 127
++ K+ Q L S+ +G V+K LI V A L L HV+ +K
Sbjct: 109 HKTILAGKMQGQ---VLTLSMQMYGCRVVQKALDHVLIDVQAVLVRELENHVLKCVK--- 162
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ G+ VI + +E FI A + L+ H GC + ++
Sbjct: 163 -----DQNGNHVIQKAIERCPTQNIGFILNAFRGQVVSLSIHPYGCRVIQRCLERCDMQS 217
Query: 188 RKQILHLISVNAA--SLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
+ IL I + + GNYVVQHV+S ++ + + S K S
Sbjct: 218 KAMILDEIFAGEGIKGMITDQYGNYVVQHVVSRDNGCAKQQVLQIVFVGLETYSKHKFAS 277
Query: 246 FVVQKCLKYQNA--VHYIIEELLNSDQ--------ILQVANDKYGNYVIQTALAETM 292
VV+KCL+ + H ++ ++ + +Q + + D YGNYV++ T+
Sbjct: 278 NVVEKCLEQADDRWRHAVLHKMADMNQHRVEGDGYVASLVKDNYGNYVVRRCTRATL 334
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H AC + G + ++ ++++ I NA L GNYV+Q D
Sbjct: 48 HIAEFACDQHGSRFIQTKLELADSDEKERVFAEIEPNAIPLMTDVFGNYVIQKFFEHGDL 107
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ--NAVHYIIEELLNSDQILQVANDKY 279
+ ++G + LS+ G VVQK L + + ++ EL N +L+ D+
Sbjct: 108 RHKTILAGKMQGQVLTLSMQMYGCRVVQKALDHVLIDVQAVLVRELEN--HVLKCVKDQN 165
Query: 280 GNYVIQTALAETMRQD 295
GN+VIQ A+ Q+
Sbjct: 166 GNHVIQKAIERCPTQN 181
>gi|429961553|gb|ELA41098.1| hypothetical protein VICG_01891 [Vittaforma corneae ATCC 50505]
Length = 467
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 21/279 (7%)
Query: 16 SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 75
++ +DQEGS+Y+Q + + ++ + F + +FEL +G +V K I NESQ+
Sbjct: 162 TVCKDQEGSRYIQGLMDTWNADQISLFFDRIVDSSFELSMNLFGNYVIQKIIPLLNESQI 221
Query: 76 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKP 135
+IL+ F ++ L S+ +G V+KLI + + ++ + S + L + +
Sbjct: 222 FSLILQ--FFGHIYEL-SLHVYGCRVVQKLIDNLRDVKSVVAELESHIPELIE----SPN 274
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ VI +C++ + + F+ + ++ + LA GC L + I I
Sbjct: 275 GNHVIQRCIDKDIDKR--FLLKEFEKNGVGLAQQRYGCRVLQRLFEVCSEEETWSIYLQI 332
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
N L + GNYV+QH + + F ++ + DLS K S V+KC+
Sbjct: 333 IKNIDILINDKYGNYVIQHFIESSNKHKDQIFSFIIKNSF-DLSKDKFSSNAVEKCV--N 389
Query: 256 NAVHYIIEELL--------NSDQIL-QVANDKYGNYVIQ 285
N +E L NS L + D Y NYV+Q
Sbjct: 390 NCSKEQLESLFKEFSKVHENSRPCLYYMCIDMYANYVVQ 428
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 163 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF 222
C+ + ++G + +D + I ++ LS + GNYV+Q ++ L +
Sbjct: 160 CITVCKDQEGSRYIQGLMDTWNADQISLFFDRIVDSSFELSMNLFGNYVIQKIIPLLNES 219
Query: 223 LIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNSDQILQVANDKYGNY 282
I ++ GH +LSL G VVQK + V ++ EL I ++ GN+
Sbjct: 220 QIFSLILQFFGHIYELSLHVYGCRVVQKLIDNLRDVKSVVAEL--ESHIPELIESPNGNH 277
Query: 283 VIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
VIQ + + + + + L+ + +++ L +YG V
Sbjct: 278 VIQRCIDKDIDK------RFLLKEFEKNGVGLAQQRYGCRV 312
>gi|294656065|ref|XP_458303.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
gi|199430829|emb|CAG86381.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
Length = 658
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 150/304 (49%), Gaps = 40/304 (13%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG---DSRILDKLFWV----VSGFTFELMSGQYGRFVFGK 65
++ LA+DQ G ++LQ+ + S+I + F V V F +EL+ +G ++ K
Sbjct: 137 EILKLAKDQYGCRFLQKKIDENVIPSSQIRTENFKVIFKEVYPFIYELIIDPFGNYLVQK 196
Query: 66 FIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKR 125
I+ C+++ L+L IL+I Q LF + S+++ G+ +++K+I + + L ++S L
Sbjct: 197 LIDYCDDANLSL-ILEI-LQYNLFQI-SINQHGTRALQKIINSLNNDYQLSL-LISGLNP 252
Query: 126 LFKFLMMTKPGSSVILQCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLN---NFID 181
L+ G+ VI + L Y+ +N FIY + + +A H+ GC L N ++
Sbjct: 253 FIIELIKDLNGNHVIQKILN-KYSPENCQFIYDSIINDLYVVATHKHGCCVLQKCLNHVN 311
Query: 182 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGH------- 234
+M+ + Q + + L+ + GNYV+Q+++S I++I L+ +
Sbjct: 312 SMQLVQFSQKILMFDT-FRKLTNDQFGNYVLQYLIS------INSISINLKMYENFMKFG 364
Query: 235 YVDLSLTKCGSFVVQKCLK--YQNAVHYIIEELLNSDQILQVA--------NDKYGNYVI 284
+L K S VV+K LK Y N + L + LQV ND +GNYVI
Sbjct: 365 VNNLCNLKFSSNVVEKFLKNCYVNEPNSPAFSNLKLELCLQVMQGDLNKMINDPFGNYVI 424
Query: 285 QTAL 288
QT +
Sbjct: 425 QTLI 428
>gi|294953151|ref|XP_002787620.1| pumilio, putative [Perkinsus marinus ATCC 50983]
gi|239902644|gb|EER19416.1| pumilio, putative [Perkinsus marinus ATCC 50983]
Length = 645
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 15/317 (4%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D LA DQ GS++LQ L + +F V +L + +G +V K + E
Sbjct: 297 DAVELAMDQYGSRFLQNALETATPSERHDVFLAVLSSAQQLTTDPFGNYVIQKLFDHLPE 356
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
+ +I+ + D L L S +G V+K+++ V +L +++ LK +
Sbjct: 357 EHI-VILSEQLLGDILRL--SFHMYGCRVVQKVLENVNAEQQVL--IVNELKGHVVDCVE 411
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ VI +C+E FI + ++ H GC + I+ + + ++
Sbjct: 412 DQNGNHVIQKCIETLPTQTLGFIVDEFRGNVTRMSLHCYGCRVVQRLIERLPEEMSEPLM 471
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ N LS+ + GNYVVQHV+ +A+ A+ + K S VV+K L
Sbjct: 472 QEVVENLWMLSQDQYGNYVVQHVVEHGPNNFKNAVVKAVAANIEQYGCHKFASNVVEKAL 531
Query: 253 ---KYQNA---VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTK 306
QN + +I + + DK+ NYV+Q L + +R + LV
Sbjct: 532 LSGSRQNQDEIIGAVIGSAGPDAPLHSMTVDKFANYVVQRCLELSQGTNR----EHLVNM 587
Query: 307 LQQHLAALRVMKYGSNV 323
LQ L LR + YG ++
Sbjct: 588 LQLDLPNLRKVTYGKHI 604
>gi|403364711|gb|EJY82128.1| Pumilio-family RNA binding protein [Oxytricha trifallax]
Length = 994
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 9/272 (3%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+++ Q GS+ LQ L ++D + V LMS YG + K + S + SQ
Sbjct: 683 MSKQQYGSKQLQRYLEKAPPELVDFIISEVVSELHNLMSDLYGNYFCQKLMTSAS-SQQR 741
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
L+IL + L+ + S DK G+ S++ +I ++ ++P + + + +
Sbjct: 742 LVIL-TELRPNLYKI-SCDKKGTHSMQCMIDMI-NMPEEQHEIQEGVVNHILDMAYDINA 798
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK-QILHLI 195
+ V+ + + K DFIYQ +++ + L+ + G + I + + +I HL+
Sbjct: 799 NHVLQKIMVCFKEEKLDFIYQPIMKYFIELSMDQNGLCVIKKLIGKITNEDKILEIQHLL 858
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLK-- 253
+ +A L ++ GNY VQ + + D + I L H + LS+ K S V++K L+
Sbjct: 859 AEHAVKLVQNPYGNYAVQQAIEVWDVRYCEPIFEKLEDHLMQLSVQKFSSNVIEKILEKA 918
Query: 254 -YQNAVHYIIEELLNSDQILQVANDKYGNYVI 284
Y+ Y + +L N + + + + YG YVI
Sbjct: 919 SYETVDRY-MRKLCNVEVMKSLIKNIYGYYVI 949
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 44/254 (17%)
Query: 90 LLASVDKFGSSSVKKLIKVVAHLPP-----LLYHVMSALKRLFKFLMMTKPGSSVILQCL 144
++ S ++GS K+L + + PP ++ V+S L L L + Q L
Sbjct: 681 VVMSKQQYGS---KQLQRYLEKAPPELVDFIISEVVSELHNLMSDLY-----GNYFCQKL 732
Query: 145 EPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISVN-AASL 202
S + + + L LY ++C ++G ++ ID + + + VN +
Sbjct: 733 MTSASSQQRLVILTELRPNLYKISCDKKGTHSMQCMIDMINMPEEQHEIQEGVVNHILDM 792
Query: 203 SRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYII 262
+ + N+V+Q ++ +D I + ++++LS+ + G V++K +I
Sbjct: 793 AYDINANHVLQKIMVCFKEEKLDFIYQPIMKYFIELSMDQNGLCVIKK----------LI 842
Query: 263 EELLNSDQILQV-----------ANDKYGNYVIQTALAETMRQDRLSVH--QRLVTKLQQ 309
++ N D+IL++ + YGNY +Q A+ + V + + KL+
Sbjct: 843 GKITNEDKILEIQHLLAEHAVKLVQNPYGNYAVQQAI------EVWDVRYCEPIFEKLED 896
Query: 310 HLAALRVMKYGSNV 323
HL L V K+ SNV
Sbjct: 897 HLMQLSVQKFSSNV 910
>gi|295657032|ref|XP_002789091.1| pumilio-family RNA binding repeat protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284989|gb|EEH40555.1| pumilio-family RNA binding repeat protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 744
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 139/339 (41%), Gaps = 53/339 (15%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
D DQ+ S +LQ+ L G S ++ + + LM ++G F+ + E
Sbjct: 369 DKIVCGNDQQASIFLQQKLKVGTSEQKFEIIEAIVNQAYPLMVNRFGNFLVQRCFEHGTP 428
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAH-------------LPPLLYHV 119
Q+ + I + L L S+D FG ++K V +P + H
Sbjct: 429 EQI-IAIANAVRGNTLSL--SMDPFGCHVIQKAFDCVPEEHKAVMVHELLRRIPETVIHR 485
Query: 120 MS--ALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINL 176
+ ++LF+ +P ++ + E AL + +A E G + +
Sbjct: 486 YACHVWQKLFELRWSNEP-PQIMAKVNE-------------ALRGMWHEVALGETGSLVV 531
Query: 177 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYV 236
N +N ++Q + + N LS + GN+ +QH+ P +
Sbjct: 532 QNIFENCVEDEKRQAIEEVLSNVDLLSHGQFGNWCIQHICEHGAPHDKSRAIEHILLWAT 591
Query: 237 DLSLTKCGSFVVQKCLKYQNAVHYIIEELLN------SDQ----ILQVANDKYGNYVIQT 286
D S+ + S VV+KCLK + ++ LN D+ ++ +A D+YGNY+IQ
Sbjct: 592 DYSMDQFASKVVEKCLKIGGS--EFLDRYLNRVCTGRPDRPRMPLIDIAGDQYGNYLIQW 649
Query: 287 ALAETMRQDRLSVHQR--LVTKLQQHLAALRVMKYGSNV 323
L + HQR + T +++H+ +LR K+GS V
Sbjct: 650 ILMNA------ASHQRDIVATHIRKHMVSLRGSKFGSRV 682
>gi|328767389|gb|EGF77439.1| hypothetical protein BATDEDRAFT_91666 [Batrachochytrium
dendrobatidis JAM81]
Length = 869
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 46/329 (13%)
Query: 14 LFSLAQDQEGSQYLQENLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN 71
+ + DQ GS+++Q+ L + D + L +F + +LM+ +G +V K E +
Sbjct: 548 IVEFSGDQHGSRFIQQKLETCTNDEKQL--VFDEIMPNALQLMTDVFGNYVIQKIFEYGS 605
Query: 72 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL- 130
+Q ++ + L S+ +G V+K + H+P + RL L
Sbjct: 606 AAQKQILA---ELMEGSVLELSLQMYGCRVVQKAFE---HVP------IEQQARLIHELD 653
Query: 131 ------MMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+ + G+ VI + +E FI A LA H GC + ++
Sbjct: 654 GNVLKCVKDQNGNHVIQKAIERVSAEHIKFIIDAFHGQVYALATHPYGCRVIQRIFEHCS 713
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSL 240
+ +L + A SL + + GNYV+QH+L P F+I+ + +G + +S
Sbjct: 714 EEETQPLLGELHRYAISLIQDQYGNYVIQHILERGRPSDKLFVINKV----KGQILTMSK 769
Query: 241 TKCGSFVVQKCLKYQNAVHY--IIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMR 293
K S VV+KC+ + + II+E+ + + + D++ NYV+Q L
Sbjct: 770 HKFASNVVEKCVAFGSPADRQDIIDEVATTKSDGTTALFTMMKDQFANYVVQKML----- 824
Query: 294 QDRLSVHQR--LVTKLQQHLAALRVMKYG 320
D S Q+ LVTK++ L +L+ YG
Sbjct: 825 -DVASEPQKVMLVTKIKPQLPSLKKFTYG 852
>gi|406861814|gb|EKD14867.1| pumilio domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 948
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 25/299 (8%)
Query: 11 NHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESC 70
NH + + DQ GS+++Q L + +S ++LF + +LM+ +G +V K E
Sbjct: 548 NH-VVEFSGDQHGSRFIQNRLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHG 606
Query: 71 NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFL 130
N Q+ +L ++ + L S+ +G V+K ++ V L + L + +
Sbjct: 607 N--QVQKRVLAEQMKNHVLEL-SLQMYGCRVVQKALEHV------LADQQAELAQELRAD 657
Query: 131 MMT----KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 186
++ + G+ V+ + +E FI +A LA H GC + ++ K
Sbjct: 658 VLKCVKDQNGNHVVQKAIERVPTEHVRFIIEAFRGQVHTLAVHPYGCRVIQRILEYCKPH 717
Query: 187 RRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
+ IL + A L + GNYV QHV+ P + + ++LS K S
Sbjct: 718 EQVGILEELHQCTAMLITDQYGNYVTQHVIEHGQPEDQAKVIRIVTSQLLELSKHKFASN 777
Query: 247 VVQKCLKYQ---------NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDR 296
VV+KC+++ N V+++ ++ Q++ D YGNYVIQ + + +R
Sbjct: 778 VVEKCIEFGTHEQRRAIVNTVNHVHSNGISPLQLM--IKDPYGNYVIQRIIGQLNGAER 834
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H L L+ GC + ++++ ++ ++ + + + ++GN+VVQ +
Sbjct: 621 HVLELSLQMYGCRVVQKALEHVLADQQAELAQELRADVLKCVKDQNGNHVVQKAIERVPT 680
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKY 279
+ I A RG L++ G V+Q+ L+Y + I+EEL +L D+Y
Sbjct: 681 EHVRFIIEAFRGQVHTLAVHPYGCRVIQRILEYCKPHEQVGILEELHQCTAML--ITDQY 738
Query: 280 GNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
GNYV Q + +D+ V R+VT L L K+ SNV
Sbjct: 739 GNYVTQHVIEHGQPEDQAKV-IRIVTS---QLLELSKHKFASNV 778
>gi|380488307|emb|CCF37468.1| hypothetical protein CH063_08789 [Colletotrichum higginsianum]
Length = 821
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 34/287 (11%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE------- 72
DQ GS+++Q+ L + +S D++F + +LM +G +V KF E N+
Sbjct: 443 DQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQVQKKVLA 502
Query: 73 SQLALIILKITFQDQLFLLASVDK-FGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
SQ+ ++ ++ Q++ V K V++ ++V L P + V+
Sbjct: 503 SQMKGKVVDLSM--QMYACRVVQKALEHVLVEQQAELVKELEPEILKVVKDQN------- 553
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ V+ + +E DF+ + LA H C + ++ ++ I
Sbjct: 554 ----GNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTEQDKETI 609
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLS---LEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
L + + L + GNYVVQH++ ED I + A V LS K S VV
Sbjct: 610 LAELHSSTQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIA---QLVTLSKHKFASNVV 666
Query: 249 QKCLKYQNAVHY------IIEELLNSDQILQ-VANDKYGNYVIQTAL 288
+KC++Y A II + LQ + D+YGNYVIQ L
Sbjct: 667 EKCIQYGTAEERKGIREQIISHAADGTSSLQLMMKDQYGNYVIQKLL 713
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ + Q+ I NA L + GNYV+Q +
Sbjct: 436 HVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQ 495
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIE---ELLN--SDQILQVAN 276
+ ++G VDLS+ VVQK L+ H ++E EL+ +IL+V
Sbjct: 496 VQKKVLASQMKGKVVDLSMQMYACRVVQKALE-----HVLVEQQAELVKELEPEILKVVK 550
Query: 277 DKYGNYVIQTALAETMRQ--D-RLSVHQRLVTKLQQHLAALRV----MKYGSNVYKWT 327
D+ GN+V+Q + RQ D + + V++L H+ A RV ++YG+ K T
Sbjct: 551 DQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTEQDKET 608
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 204 RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYI 261
+ ++GN+VVQ ++ L ID + + RG L+ V+Q+ L+Y + I
Sbjct: 550 KDQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTEQDKETI 609
Query: 262 IEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 321
+ EL +S Q+L D+YGNYV+Q + +DR + Q ++ + L L K+ S
Sbjct: 610 LAELHSSTQVL--ITDQYGNYVVQHIIEHGKSEDRSRIIQLVIAQ----LVTLSKHKFAS 663
Query: 322 NV 323
NV
Sbjct: 664 NV 665
>gi|310789326|gb|EFQ24859.1| hypothetical protein GLRG_00003 [Glomerella graminicola M1.001]
Length = 821
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 34/287 (11%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE------- 72
DQ GS+++Q+ L + +S D++F + +LM +G +V KF E N+
Sbjct: 443 DQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQVQKKVLA 502
Query: 73 SQLALIILKITFQDQLFLLASVDK-FGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM 131
SQ+ ++ ++ Q++ V K V++ ++V L P + V+
Sbjct: 503 SQMKGKVVDLSM--QMYACRVVQKALEHVLVEQQAELVKELEPEILKVVKDQN------- 553
Query: 132 MTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 191
G+ V+ + +E DF+ + LA H C + ++ ++ I
Sbjct: 554 ----GNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTDQDKETI 609
Query: 192 LHLISVNAASLSRHRSGNYVVQHVLS---LEDPFLIDAICFALRGHYVDLSLTKCGSFVV 248
L + + L + GNYVVQH++ ED I + A V +S K S VV
Sbjct: 610 LAELHNSTQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIA---QLVTMSKHKFASNVV 666
Query: 249 QKCLKYQNAVHY------IIEELLNSDQILQ-VANDKYGNYVIQTAL 288
+KC++Y +A II + + LQ + D+YGNYVIQ L
Sbjct: 667 EKCIQYGSAEERKGIREQIISQSADGTSSLQLMMKDQYGNYVIQKLL 713
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ + Q+ I NA L + GNYV+Q +
Sbjct: 436 HVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQ 495
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIE---ELLN--SDQILQVAN 276
+ ++G VDLS+ VVQK L+ H ++E EL+ +IL+V
Sbjct: 496 VQKKVLASQMKGKVVDLSMQMYACRVVQKALE-----HVLVEQQAELVKELEPEILKVVK 550
Query: 277 DKYGNYVIQTALAETMRQ--D-RLSVHQRLVTKLQQHLAALRV----MKYGSNVYKWT 327
D+ GN+V+Q + RQ D + + V++L H+ A RV ++YG++ K T
Sbjct: 551 DQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTDQDKET 608
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 204 RHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYI 261
+ ++GN+VVQ ++ L ID + + RG L+ V+Q+ L+Y I
Sbjct: 550 KDQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTDQDKETI 609
Query: 262 IEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 321
+ EL NS Q+L D+YGNYV+Q + +DR + Q ++ + L + K+ S
Sbjct: 610 LAELHNSTQVL--ITDQYGNYVVQHIIEHGKSEDRSRIIQLVIAQ----LVTMSKHKFAS 663
Query: 322 NV 323
NV
Sbjct: 664 NV 665
>gi|302692892|ref|XP_003036125.1| hypothetical protein SCHCODRAFT_51963 [Schizophyllum commune H4-8]
gi|300109821|gb|EFJ01223.1| hypothetical protein SCHCODRAFT_51963 [Schizophyllum commune H4-8]
Length = 361
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 150/336 (44%), Gaps = 34/336 (10%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNE 72
+ + DQ GS+++Q+ L + + +F +V +L+ +G +V K E +
Sbjct: 40 IVEFSGDQHGSRFIQQKLETASTEEKQIVFDEIVPDNALQLIQDVFGNYVIQKLFE--HG 97
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV------AHLPPLLYHVMSALKRL 126
+Q+ +L T + + L S+ +G V+K I+ + A + L HV+ +K
Sbjct: 98 TQVQKTVLASTMEGHILPL-SLQMYGCRVVQKAIECILPEQQGAFVRELEAHVLKCVK-- 154
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKG 185
G+ VI + +E + F+ + +Y L+ H GC L ++++
Sbjct: 155 ------DANGNHVIQKLIERVPADRLQFV--STFRGNVYDLSTHPYGCRVLQRSLEHLPH 206
Query: 186 SRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGS 245
++ + +L++ + GNYVVQ V+ P + +RG + L+ K S
Sbjct: 207 DMTYPLMDELHKYVLNLAQDQFGNYVVQFVIEHGSPTDKALVLNQMRGQILALARHKFAS 266
Query: 246 FVVQKCLKYQNA---VHYIIEELLNS----DQILQVANDKYGNYVIQTALAETMRQDRLS 298
V +K L + ++ H I E ++ + ++ + D++ NYV+Q ALA + +
Sbjct: 267 NVCEKALVFADSETRAHLIDEIMMPTADGVSPLVIMMKDQFANYVLQRALATAEGEQK-- 324
Query: 299 VHQRLVTKLQQHLAALRVMKYGSNVYKWTTASHPCL 334
+ L+ K++ H+A +R +Y S K A L
Sbjct: 325 --EMLIAKVKPHIANMR--RYSSAYSKHLVAGEYAL 356
>gi|167378573|ref|XP_001734853.1| pumilio [Entamoeba dispar SAW760]
gi|165903440|gb|EDR28975.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 184
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 164 LYLAC--HEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
+ L C H GC + I+++ ++L +I ++ L+ + GNYVVQ+VL P
Sbjct: 12 IVLECCKHPYGCRVVQRVIESVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYP 71
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKY 279
I ++G+ V LS+ K S V++KC K+ N I+EE+ ++ ILQ+ D++
Sbjct: 72 NDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFATPNERQQILEEIYQNNGILQMMQDQF 131
Query: 280 GNYVIQTAL 288
NYV+Q +
Sbjct: 132 ANYVVQKII 140
>gi|448514914|ref|XP_003867201.1| Puf3 protein [Candida orthopsilosis Co 90-125]
gi|380351540|emb|CCG21763.1| Puf3 protein [Candida orthopsilosis]
Length = 769
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 137/300 (45%), Gaps = 15/300 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+DQ GS+++Q L + +F + +F+LM+ +G +V K+ E + Q
Sbjct: 456 FTKDQHGSRFIQTKLPQASDEEKEVIFKEICDISFDLMTDVFGNYVMQKYFEYGSIEQKQ 515
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
+++ K+ ++ L S+ +G V++ ++ + P ++ L+ +
Sbjct: 516 ILLQKML--GHIYEL-SLQTYGCRVVQRALESLEE--PDQLKIILELQDKVLVCATDQNS 570
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 196
+ VI + +E K FI H +L + GC + I + +++I I
Sbjct: 571 NHVIQKSIELIPFDKVRFISDVLQTHFYHLCTDQYGCRVVQRLIHFGNDNDKQEIYTEIK 630
Query: 197 VNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKC--LKY 254
+ + L H+ GNYVVQ LE+ I + + + K S V +K L
Sbjct: 631 DHVSFLITHKFGNYVVQAC--LENSLRESEIFTTVVSKFTHFATNKYASNVCEKLVDLAT 688
Query: 255 QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALA--ETMRQDRLSVHQRLVTKLQQHLA 312
Q+ + I+E ++ +++ ++ D+YGNYV+Q ++ + D+ ++LV KLQQ L+
Sbjct: 689 QSQIQQILEVVMQGNELERIMGDEYGNYVVQKIVSVLDGNSPDK----KKLVVKLQQLLS 744
>gi|312374345|gb|EFR21918.1| hypothetical protein AND_16037 [Anopheles darlingi]
Length = 1034
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 130 LMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 189
LM G+ VI + E + + Q H L LA GC + ++++ +++
Sbjct: 665 LMTDVFGNYVIQKFFEFGSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPPEQQQ 724
Query: 190 QILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
+I+ + + + ++GN+VVQ + DP + I A R LS G V+Q
Sbjct: 725 EIVRELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQ 784
Query: 250 KCLKY---QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALA---ETMRQDRLSVH--- 300
+ L++ + + E N++Q++Q D+YGNYVIQ L M +D+ + +
Sbjct: 785 RILEHCTPEQTAPILAELHANTEQLIQ---DQYGNYVIQHVLGTGLHVMMKDQYANYVVQ 841
Query: 301 ---------QR--LVTKLQQHLAALRVMKYGSNV 323
QR L+ K++ H+ +L+ YG ++
Sbjct: 842 KMIDVSEPTQRKVLLHKIRPHMNSLKKYTYGKHI 875
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 10 TNHDLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 69
TNH + +QDQ GS+++Q+ L +F + G + LM+ +G +V KF E
Sbjct: 623 TNH-IVEFSQDQHGSRFIQQKLERATGPEKQLVFNEILGAAYNLMTDVFGNYVIQKFFEF 681
Query: 70 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPP---------LLYHVM 120
+ Q + ++ L ++ +G ++K ++ + PP L HV+
Sbjct: 682 GSPEQKQALAQQVKGH---VLPLALQMYGCRVIQKALESI---PPEQQQEIVRELDGHVL 735
Query: 121 SALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI 180
+K + G+ V+ +C+E FI A L+ H GC + +
Sbjct: 736 KCVK--------DQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRIL 787
Query: 181 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVL 216
++ + IL + N L + + GNYV+QHVL
Sbjct: 788 EHCTPEQTAPILAELHANTEQLIQDQYGNYVIQHVL 823
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDP 221
H + + + G + ++ G ++ + + I A +L GNYV+Q P
Sbjct: 625 HIVEFSQDQHGSRFIQQKLERATGPEKQLVFNEILGAAYNLMTDVFGNYVIQKFFEFGSP 684
Query: 222 FLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKY 279
A+ ++GH + L+L G V+QK L+ I+ EL +L+ D+
Sbjct: 685 EQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPPEQQQEIVREL--DGHVLKCVKDQN 742
Query: 280 GNYVIQTAL 288
GN+V+Q +
Sbjct: 743 GNHVVQKCI 751
>gi|398021567|ref|XP_003863946.1| pumilio protein, putative [Leishmania donovani]
gi|322502180|emb|CBZ37263.1| pumilio protein, putative [Leishmania donovani]
Length = 837
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 14/238 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
A+DQEGS+++Q + + LD LF + EL++ +G +V K ++ N QL
Sbjct: 414 FAKDQEGSRFIQSAVDTASPESLDVLFHEIFESPLELVTDIFGNYVLQKLLDKGNTPQLT 473
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ + ++ +G ++K I+V+ L +++ LK + + G
Sbjct: 474 FAAERMCGH---VVELTMQTYGCRVIQKCIEVMPSA--GLDIILAELKDNVAKCIQDQNG 528
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR---KQILH 193
+ VI +C+E + FI A + LA H GC + + + ++L
Sbjct: 529 NHVIQKCVE-VIPQRCGFIISAFSGRVMELATHAYGCRVIQCIMQHCPEQEDTIFNELLK 587
Query: 194 LISVNAASLSRHRSGNYVVQHVL-SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+ V L++ + GNYV+QHVL +++D I+++ AL+ + LS K S V++K
Sbjct: 588 AVDV----LAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFYLSKQKFASNVMEK 641
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 7/189 (3%)
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ V+ + L+ + F + H + L GC + I+ M + IL +
Sbjct: 456 GNYVLQKLLDKGNTPQLTFAAERMCGHVVELTMQTYGCRVIQKCIEVMPSAGLDIILAEL 515
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY- 254
N A + ++GN+V+Q + + P I A G ++L+ G V+Q +++
Sbjct: 516 KDNVAKCIQDQNGNHVIQKCVEV-IPQRCGFIISAFSGRVMELATHAYGCRVIQCIMQHC 574
Query: 255 QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
I ELL + +L A D+YGNYVIQ L + ++ + + L+ L
Sbjct: 575 PEQEDTIFNELLKAVDVL--AKDQYGNYVIQHVLQNVKDESKI---ESVYAALKPKFFYL 629
Query: 315 RVMKYGSNV 323
K+ SNV
Sbjct: 630 SKQKFASNV 638
>gi|146097730|ref|XP_001468199.1| putative pumilio protein 6 [Leishmania infantum JPCM5]
gi|134072566|emb|CAM71280.1| putative pumilio protein 6 [Leishmania infantum JPCM5]
Length = 837
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 14/238 (5%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
A+DQEGS+++Q + + LD LF + EL++ +G +V K ++ N QL
Sbjct: 414 FAKDQEGSRFIQSAVDTASPESLDVLFHEIFESPLELVTDIFGNYVLQKLLDKGNTPQLT 473
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPG 136
++ + ++ +G ++K I+V+ L +++ LK + + G
Sbjct: 474 FAAERMCGH---VVELTMQTYGCRVIQKCIEVMPSA--GLDIILAELKDNVAKCIQDQNG 528
Query: 137 SSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR---KQILH 193
+ VI +C+E + FI A + LA H GC + + + ++L
Sbjct: 529 NHVIQKCVE-VIPQRCGFIISAFSGRVMELATHAYGCRVIQCIMQHCPEQEDTIFNELLK 587
Query: 194 LISVNAASLSRHRSGNYVVQHVL-SLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
+ V L++ + GNYV+QHVL +++D I+++ AL+ + LS K S V++K
Sbjct: 588 AVDV----LAKDQYGNYVIQHVLQNVKDESKIESVYAALKPKFFYLSKQKFASNVMEK 641
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 7/189 (3%)
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ V+ + L+ + F + H + L GC + I+ M + IL +
Sbjct: 456 GNYVLQKLLDKGNTPQLTFAAERMCGHVVELTMQTYGCRVIQKCIEVMPSAGLDIILAEL 515
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKY- 254
N A + ++GN+V+Q + + P I A G ++L+ G V+Q +++
Sbjct: 516 KDNVAKCIQDQNGNHVIQKCVEV-IPQRCGFIISAFSGRVMELATHAYGCRVIQCIMQHC 574
Query: 255 QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
I ELL + +L A D+YGNYVIQ L + ++ + + L+ L
Sbjct: 575 PEQEDTIFNELLKAVDVL--AKDQYGNYVIQHVLQNVKDESKI---ESVYAALKPKFFYL 629
Query: 315 RVMKYGSNV 323
K+ SNV
Sbjct: 630 SKQKFASNV 638
>gi|425774740|gb|EKV13041.1| hypothetical protein PDIG_40650 [Penicillium digitatum PHI26]
gi|425780733|gb|EKV18734.1| hypothetical protein PDIP_26200 [Penicillium digitatum Pd1]
Length = 824
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 138/330 (41%), Gaps = 49/330 (14%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 79
DQ+ S +LQ+ L G + + ++ + LM ++G F+ + E Q+ I
Sbjct: 477 DQQASIFLQQKLKVGTTEQKFDIIESIAHQAYPLMVNRFGNFLIQRCFEHGTPEQVVAIA 536
Query: 80 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAH-------------LPPLLYHVMS--ALK 124
I L S+D FG V+K V+ +P + H + +
Sbjct: 537 NAIRGNT---LNLSMDAFGCHVVQKAFDCVSEEHKAIMVHELLRRIPETVVHRYACHVWQ 593
Query: 125 RLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 184
+LF+ +P V+ + E +D +A E G + + N +N
Sbjct: 594 KLFELRWSGEP-PQVMAKVNEALRGMWHD------------VALGETGSLVVQNIFENCV 640
Query: 185 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPF-LIDAICFALRGHYVDLSLTKC 243
++ + + L+R + GN+ +QH+ P A+ LR VD S+ +
Sbjct: 641 EEEKRPAIEEVLAKIDVLARGQFGNWCIQHICEHGAPHDKSRAVEHVLR-WAVDYSMDQF 699
Query: 244 GSFVVQKCLKYQNAV---HYIIEELLN-SDQ----ILQVANDKYGNYVIQTALAETMRQD 295
S +V+KCLK HY+ SD+ ++ +A D+YGNY+IQ L
Sbjct: 700 ASKIVEKCLKIGGTEFMDHYLSRVCTGRSDRPRMPLIDIAGDQYGNYLIQWILMNA---- 755
Query: 296 RLSVHQR--LVTKLQQHLAALRVMKYGSNV 323
+ HQR + + +++H+ +LR K+GS V
Sbjct: 756 --APHQRELVASHIRKHMVSLRGSKFGSRV 783
>gi|115504333|ref|XP_001218959.1| pumillio RNA binding protein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|83642441|emb|CAJ16404.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 667
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 12/164 (7%)
Query: 162 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHV---LSL 218
H YLA +QGCI+ + ++ +++KQ++ + A ++ GNYVVQ + + L
Sbjct: 367 HSRYLAATQQGCISFMHILEFCNEAQKKQLISPLVPYFAHVALDPFGNYVVQRIIQSIGL 426
Query: 219 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYI----IEELLNSDQILQ- 273
+ I + CFA G +++S K GS VV++ +K V + +EEL++ LQ
Sbjct: 427 DASEYITS-CFA--GELLNMSCNKFGSNVVEETIKVCGGVPAVRRLLMEELISKPGALQR 483
Query: 274 VANDKYGNYVIQTALAETMRQDRLS-VHQRLVTKLQQHLAALRV 316
+ D +GN+V+QT + Q+ L V++RL LQ A R+
Sbjct: 484 LVQDSFGNFVVQTFIGSITDQNELKYVNERLRPVLQNSPYAARI 527
>gi|145497190|ref|XP_001434584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401711|emb|CAK67187.1| unnamed protein product [Paramecium tetraurelia]
Length = 581
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 151/323 (46%), Gaps = 24/323 (7%)
Query: 13 DLFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNE 72
++ + + Q GS+ +Q++ ++ LD++ + +LM Y ++FG +SC
Sbjct: 267 NVVNFVKTQHGSRLIQKHFTTCTQMELDQMLQEIGSHLPDLMIDPYANYMFGSLSQSCAP 326
Query: 73 SQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
Q L IL+ T ++L +A DK G+ +++ L+ +++ V +++K L +
Sbjct: 327 HQ-RLYILQ-TIGNRLVDIA-CDKKGTHAIQSLVSLIS-CKQEEQMVENSIKNNIISLTL 382
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-- 190
G+ +I + + + + I+ ++ + + H+ G L + I K + K
Sbjct: 383 DSQGTHLIKKIIARFSEDRLNNIFNKLMDRFIQVVNHQFGLCVLKDLITKFKNNLDKSTV 442
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVL----SLEDPFLIDAICFALRGHYVDLSLTKCGSF 246
I++ I + + + GNY VQHV+ L+ +ID I L + LS+ K S
Sbjct: 443 IINKIRDHLDEIIQDPFGNYGVQHVIDVYGDLKCASIIDKILLKL----IQLSIHKYSSN 498
Query: 247 VVQKCL--KYQNAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
VV+KC+ I++L L++ +K+G +V+Q AL E D+L+ L
Sbjct: 499 VVEKCILETSPKTQKRFIKQLSQDIICLELMKNKFGTFVLQKALQEA---DKLAEADLLQ 555
Query: 305 TKLQQHLAALRVMKYGSNVY-KW 326
L ++L ++ Y N+ KW
Sbjct: 556 QALCRNLPSI----YAQNIRQKW 574
>gi|237840953|ref|XP_002369774.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|211967438|gb|EEB02634.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|221483718|gb|EEE22030.1| pumilio, putative [Toxoplasma gondii GT1]
Length = 1913
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 22/283 (7%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
A+D + +LQE L + + + + +L Q+G +V KF E+ + +
Sbjct: 998 LEFAKDPFAAVFLQEQLETCPLADRVPILFQLLPHALDLAVDQHGNYVLQKFFETGCDKE 1057
Query: 75 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLP-PLLYHVMSALKRLFKFLMMT 133
+ ++T D +F L S++ +G +++ V LP P ++ LK +
Sbjct: 1058 KEWLAAQLT--DHVFRL-SLEVYGCRVIQR---AVESLPVPAQLRLVRELKDHVITCVED 1111
Query: 134 KPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 193
+ G+ VI +C E + FI A ++ H GC + ++ S+ ++
Sbjct: 1112 QHGNHVIQKCAERLPSPSVQFIIDAFKGQEARMSVHSYGCRVIQRLLEACPMSQVAALID 1171
Query: 194 LISVNAASLSRHRSGNYVVQHVLSL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 249
++ L R + GNYVVQHVL + +ID +C + + LS K VV+
Sbjct: 1172 VVMAELCMLIRDQFGNYVVQHVLEFGRDADKMKIIDFMCEDI----IALSTEKYACNVVE 1227
Query: 250 KCLKYQ---NAVHYIIEELLNSDQILQ----VANDKYGNYVIQ 285
+ L A II L + + Q V D+YGNYV+Q
Sbjct: 1228 RALTLNAMGRARRRIITAALGPEMMGQPLKMVMLDRYGNYVVQ 1270
>gi|325190256|emb|CCA24733.1| pumiliolike mating protein M90 putative [Albugo laibachii Nc14]
Length = 595
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 153/337 (45%), Gaps = 42/337 (12%)
Query: 14 LFSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 73
L +A+DQ GS+++Q L S + +F LM+ +G +V K E
Sbjct: 263 LLDVARDQTGSRFIQLRLEFASSDERNAVFEEALPQALVLMTDVFGNYVIQKLFELGTTH 322
Query: 74 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLM-- 131
Q +I + + + LA + +G ++K ++VV +Y ++ L+ L M
Sbjct: 323 QQQQLI--ASMKSSMVELA-LQVYGCRVIQKALEVVN-----VYEKVTILRELIGHTMRC 374
Query: 132 -MTKPGSSVILQCLEP-SYNHKND------------FIYQAALEHCLYLACHEQGCINLN 177
+ + G+ VI +C+E SY + + FI A + L+ H GC +
Sbjct: 375 IIDQNGNHVIQKCIEVCSYKNPANTESKQLRGTDVQFIIDAFMGKAAKLSTHAYGCRVIQ 434
Query: 178 NFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVL---SLEDPFLIDAICFALRGH 234
+++ + + ++ + L +++ GNYVVQHV+ + +I++I +
Sbjct: 435 RILEHCELEQTLPLVDELIWKCRELVKNQFGNYVVQHVIMHGADNHRAMIESILLEELPY 494
Query: 235 YVDLSLTKCGSFVVQKCLKYQNA--VHYIIEELLNSDQ------ILQVANDKYGNYVIQT 286
+ S+ K S VV+ L++ +A + I+ +L D+ +L + YGNYV+Q
Sbjct: 495 W---SMHKYASNVVETYLEHTDADKICLAIDSILAPDESGVPRTLLTMMKHMYGNYVVQK 551
Query: 287 ALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
L + DR S H R++ ++++ A L YG +V
Sbjct: 552 LLD---KADRTS-HARILGIIKENSAFLEKFTYGRHV 584
>gi|158516905|gb|ABW70169.1| putative pumilio-family RNA-binding domain-containing protein
[Bambusa oldhamii]
Length = 156
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 191 ILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 250
I+ I +A L++ + GNYV+QHVL I L G V +S K S V++K
Sbjct: 5 IIDEILQSACILAQDQYGNYVMQHVLERGKGHERAEIINKLAGQVVTMSQNKFASNVIEK 64
Query: 251 CLKYQNA------VHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLV 304
C ++ + + I+E+ +D +L + D+Y NYV+Q L Q R + L+
Sbjct: 65 CFQHGDIAERDLLIREIVEQTEGNDNLLAMMKDQYANYVVQKILETCNEQQR----ELLL 120
Query: 305 TKLQQHLAALRVMKYGSNV 323
++++ HL ALR YG ++
Sbjct: 121 SRVKGHLQALRKYTYGKHI 139
>gi|123471212|ref|XP_001318807.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121901575|gb|EAY06584.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 407
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 128/281 (45%), Gaps = 21/281 (7%)
Query: 17 LAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLA 76
+++D S+ LQ+ + + +F +S + EL+ Q FV K E Q
Sbjct: 91 MSKDPNKSRNLQKRMQECPQSERNMIFNALSPYLNELVYDQSANFVIQKLCEGATPEQQK 150
Query: 77 LIILKITFQDQLFLLASVDKFGSSSVK-KLIKVVAHLPPLLYHVMSALKRLFKFLM---M 132
+++ F L ++ S+ ++++ + +V + K L LM
Sbjct: 151 IMLD--------FFLTDINNIVDHSIACRVLQRFIECSTEMKNVDTLFKALLPNLMSLCF 202
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
++ G+ ++ + + + N I ++ L + + LA GC + + K ++ I+
Sbjct: 203 SQNGNHIVQRFVVALPDRLNTII-ESILPNVIPLAIDNCGCRIVQRLFEQYKINQLSLIV 261
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ + ++ L+ ++ GNYVVQ++LS + A+ + +G + S+ K S V++KC+
Sbjct: 262 NEVMKHSVDLATNQYGNYVVQYILSSGQTEYVSALLKSFKGKFYSFSIHKFASNVIEKCI 321
Query: 253 K--YQNAVHYIIEELL------NSDQILQVANDKYGNYVIQ 285
+ I +E++ N +IL + D++GNYVIQ
Sbjct: 322 RGASDQEREDIFDEIIGTSGNFNHPRILSMVEDQFGNYVIQ 362
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 198 NAASLSRHRSGNYVVQH-VLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL-KYQ 255
N SL ++GN++VQ V++L D ++ I ++ + + L++ CG +VQ+ +Y+
Sbjct: 196 NLMSLCFSQNGNHIVQRFVVALPD--RLNTIIESILPNVIPLAIDNCGCRIVQRLFEQYK 253
Query: 256 -NAVHYIIEELLNSDQILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHLAAL 314
N + I+ E++ + +A ++YGNYV+Q L+ + + + +S L+ + +
Sbjct: 254 INQLSLIVNEVMKHS--VDLATNQYGNYVVQYILS-SGQTEYVSA---LLKSFKGKFYSF 307
Query: 315 RVMKYGSNV 323
+ K+ SNV
Sbjct: 308 SIHKFASNV 316
>gi|388583020|gb|EIM23323.1| ARM repeat-containing protein [Wallemia sebi CBS 633.66]
Length = 373
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 131/294 (44%), Gaps = 17/294 (5%)
Query: 12 HDLF----SLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFI 67
H++F A DQ GS+++Q+ L + L ++F + T EL S +G +V K
Sbjct: 38 HNIFGYVTEFATDQLGSRFIQQKLDNAPPESLMRVFEEIFPNTVELSSDVFGNYVIQKLF 97
Query: 68 ESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLF 127
E + Q ++ KI +D + L S +G V+K I+ V L ++ ++ +
Sbjct: 98 EHGTQDQRLRLVNKI--KDCVPTL-SFQMYGCRVVQKAIECVEEAEQL--ELVKRVETIT 152
Query: 128 KFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 187
+ + + + VI + +E K + + LA H GC L +++ +R
Sbjct: 153 ERAVQDQNANHVIQRIIERVDPDKLGNFPEVFANNAKELATHPYGCRVLQRSFEHIGQAR 212
Query: 188 RKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFV 247
++++ + + +L GNYVVQ++L I + + +L+ K S V
Sbjct: 213 SRELIEQLHESVDNLVVDMFGNYVVQYLLEFGTDEDRSRIVVKINQRFFELARHKFASNV 272
Query: 248 VQKCLKYQNA------VHYIIE--ELLNSDQILQVANDKYGNYVIQTALAETMR 293
+K L N ++ +I+ + + D I + D++GNYV+Q A+ R
Sbjct: 273 CEKALIKANEKDKEMLIYRLIDRSDEASVDGIPSLMKDQFGNYVLQRAINAVSR 326
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 172 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFAL 231
GC + I+ ++ + + +++ + + ++ N+V+Q ++ DP +
Sbjct: 125 GCRVVQKAIECVEEAEQLELVKRVETITERAVQDQNANHVIQRIIERVDPDKLGNFPEVF 184
Query: 232 RGHYVDLSLTKCGSFVVQKCLKY--QNAVHYIIEELLNSDQILQVANDKYGNYVIQTALA 289
+ +L+ G V+Q+ ++ Q +IE+L S L V D +GNYV+Q L
Sbjct: 185 ANNAKELATHPYGCRVLQRSFEHIGQARSRELIEQLHESVDNLVV--DMFGNYVVQYLLE 242
Query: 290 ETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+DR R+V K+ Q L K+ SNV
Sbjct: 243 FGTDEDR----SRIVVKINQRFFELARHKFASNV 272
>gi|68467297|ref|XP_722310.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
gi|68467526|ref|XP_722196.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444151|gb|EAL03428.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444276|gb|EAL03552.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
Length = 938
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 153/324 (47%), Gaps = 43/324 (13%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG-----DSRI--LDKLFWVVSGFTFELMSGQYGRFVFGK 65
++ LA+DQ G ++LQ+ + R+ + +F + +EL+ +G ++ K
Sbjct: 285 EILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFGNYLIQK 344
Query: 66 FIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV--AHLPPLLYHVMSAL 123
I CNES L L++ Q LF + S+++ G+ +++K+I + +H LL + L
Sbjct: 345 LIVYCNESNLDLLME--ILQYNLFQI-SINQHGTRALQKIIDSLNNSHQLGLL---IKGL 398
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K L+ G+ VI + L FIY + ++ +A H+ GC L ++++
Sbjct: 399 KPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNHV 458
Query: 184 K----GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
G + IL N L + GNYV+Q+++S+ +D I F + ++V+
Sbjct: 459 TLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLISINS---LD-INFQIFQNFVNFG 512
Query: 240 LT-----KCGSFVVQKCLK-----------YQNAVHYIIEELLNSDQILQVANDKYGNYV 283
++ K S VV+K LK + N +I +L SD + + ND YGNYV
Sbjct: 513 ISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSD-LNVLINDPYGNYV 571
Query: 284 IQTALAETMRQDRLSVHQRLVTKL 307
IQT + + M +++ + KL
Sbjct: 572 IQT-MIDIMVNPQVNYQNNNIDKL 594
>gi|255728835|ref|XP_002549343.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133659|gb|EER33215.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 970
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 145/308 (47%), Gaps = 48/308 (15%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG-----DSRI--LDKLFWVVSGFTFELMSGQYGRFVFGK 65
++ LA+DQ G ++LQ+ + R+ D +F + +EL+ +G ++ K
Sbjct: 301 EILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFDIIFNQTYQYMYELIIDPFGNYLIQK 360
Query: 66 FIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV--AHLPPLLYHVMSAL 123
I CNES L L++ Q LF + S+++ G+ +++K+I + +H LL + L
Sbjct: 361 LIAYCNESNLDLLME--ILQYNLFQI-SINQHGTRALQKIIDNLNNSHQLGLL---IKGL 414
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K L+ G+ VI + L FIY + ++ +A H+ GC L ++++
Sbjct: 415 KPYIIELIKDLNGNHVIQKILNKYQPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNHV 474
Query: 184 K----GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
G + IL N L + GNYV+Q+++S+ +D I F + +++
Sbjct: 475 TLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLISINS---LD-INFKIFQNFITFG 528
Query: 240 LT-----KCGSFVVQKCLK--YQN------------AVHYIIEELLNSDQILQVANDKYG 280
++ K S VV+K LK Y N + YII L+N +L ND YG
Sbjct: 529 ISNLCNLKFSSNVVEKFLKNCYTNETVNSSFANLKFELIYII--LINDLNVL--INDPYG 584
Query: 281 NYVIQTAL 288
NYVIQT +
Sbjct: 585 NYVIQTMI 592
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 127 FKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKG 185
+ + ++ P + ++Q L N N + L++ L+ ++ ++ G L IDN+
Sbjct: 344 YMYELIIDPFGNYLIQKLIAYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDNLNN 403
Query: 186 SRRKQIL-HLISVNAASLSRHRSGNYVVQHVLSLEDP----FLIDAICFALRGHYVDLSL 240
S + +L + L + +GN+V+Q +L+ P F+ D+I L Y+ ++
Sbjct: 404 SHQLGLLIKGLKPYIIELIKDLNGNHVIQKILNKYQPPDCQFIYDSIIDDL---YI-VAT 459
Query: 241 TKCGSFVVQKCLKYQNAVHYIIEEL-------LNSDQILQVANDKYGNYVIQTALAETMR 293
K G V+QKCL H +++L L + + ND++GNYV+Q ++
Sbjct: 460 HKHGCCVLQKCLN-----HVTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSL 514
Query: 294 QDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+ Q +T ++ L +K+ SNV
Sbjct: 515 DINFKIFQNFITF---GISNLCNLKFSSNV 541
>gi|349605218|gb|AEQ00529.1| Pumilio-like protein 1-like protein, partial [Equus caballus]
Length = 281
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Query: 136 GSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 195
G+ V+ +C+E FI A L+ H GC + +++ + IL +
Sbjct: 65 GNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEEL 124
Query: 196 SVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCLKYQ 255
+ L + + GNYV+QHVL P I +RG+ + LS K S VV+KC+ +
Sbjct: 125 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHA 184
Query: 256 NAVH--YIIEELLNSDQ-----ILQVANDKYGNYVIQTAL--AETMRQDRLSVHQRLVTK 306
+ +I+E+ + + + D+Y NYV+Q + AE Q ++ +H K
Sbjct: 185 SRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPA-QRKIVMH-----K 238
Query: 307 LQQHLAALRVMKYGSNV 323
++ H+A LR YG ++
Sbjct: 239 IRPHIATLRKYTYGKHI 255
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 14/262 (5%)
Query: 2 QTIAFEHCTNHDLFSLAQDQEGSQYLQENLS--SGDSRILDKLFWVVSGFTFELMSGQYG 59
Q +A + SLA G + +Q+ L D ++++++ + G + + Q G
Sbjct: 6 QKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQVINEMVRELDGHVLKCVKDQNG 65
Query: 60 RFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHV 119
V K IE L II F+ Q+F L S +G ++++++ LP +
Sbjct: 66 NHVVQKCIECVQPQSLQFII--DAFKGQVFAL-STHPYGCRVIQRILEHC--LPDQTLPI 120
Query: 120 MSALKRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNF 179
+ L + + L+ + G+ VI LE I + L L+ H+ +
Sbjct: 121 LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 180
Query: 180 IDNMKGSRRKQIL-HLISVNAA------SLSRHRSGNYVVQHVLSLEDPFLIDAICFALR 232
+ + + R ++ + ++N ++ + + NYVVQ ++ + +P + +R
Sbjct: 181 VTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIR 240
Query: 233 GHYVDLSLTKCGSFVVQKCLKY 254
H L G ++ K KY
Sbjct: 241 PHIATLRKYTYGKHILAKLEKY 262
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 226 AICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHYIIEELLNS--DQILQVANDKYGNYV 283
A+ +RGH + L+L G V+QK L++ A +I E++ +L+ D+ GN+V
Sbjct: 9 ALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQVINEMVRELDGHVLKCVKDQNGNHV 68
Query: 284 IQTALAETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNV 323
+Q + E ++ L Q ++ + + AL YG V
Sbjct: 69 VQKCI-ECVQPQSL---QFIIDAFKGQVFALSTHPYGCRV 104
>gi|320584088|gb|EFW98300.1| hypothetical protein HPODL_0192 [Ogataea parapolymorpha DL-1]
Length = 959
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 145/321 (45%), Gaps = 26/321 (8%)
Query: 15 FSLAQDQEGSQYLQENLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 74
+ A+DQ GS+++Q+ L+ + R + +F + +LM+ +G +V K+ E N+ Q
Sbjct: 434 YEFAKDQHGSRFIQQQLALSNDRDKEVIFNEIRNHAMDLMTDVFGNYVIQKYFEHGNDVQ 493
Query: 75 LALII--LKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMM 132
++ ++ +F D S+ +G V+K ++ + L ++ L+ L+
Sbjct: 494 RKVMFESMRGSFYD-----LSLQMYGCRVVQKGLEALQLEEQL--QILDELRENILLLVK 546
Query: 133 TKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 192
+ G+ VI + +E K FI + +L+ H GC + ++ + ++ IL
Sbjct: 547 DQNGNHVIQKSIECIPIAKIPFILDSIKHQIYHLSTHPYGCRVIQRLLEFSDQTDQQFIL 606
Query: 193 HLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL 252
+ L + + GNYV+QHV+ D I + + V+LS K S V+KC+
Sbjct: 607 DELKDYVYYLIQDQFGNYVIQHVVEHGSVKYTDEILQVVLENLVELSKHKFASNAVEKCI 666
Query: 253 KYQNAVHY--IIEELLNSDQILQ-----------VANDKYGNYVIQTALAETMRQDRLSV 299
+Q + I +E++ + + D + NYV+Q L E + ++ +
Sbjct: 667 IHQTEENRGKIYKEIMRDNMDPHGKLDENSCLCLMMKDPFANYVVQK-LVELIDDEKKGL 725
Query: 300 HQRLVTKLQQHLAALRVMKYG 320
LV K++ +L + YG
Sbjct: 726 ---LVKKIRDYLKLISKNNYG 743
>gi|449547439|gb|EMD38407.1| hypothetical protein CERSUDRAFT_82658 [Ceriporiopsis subvermispora
B]
Length = 414
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 20/318 (6%)
Query: 20 DQEGSQYLQENLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 78
DQ GS+++Q+ L + +S +F +V +L+ +G +V K E + +Q+
Sbjct: 79 DQHGSRFIQQKLETANSEEKQIVFDEIVPHNALQLIQDVFGNYVVQKLFE--HGTQVQKT 136
Query: 79 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAHLPPLLYHVMSALKRLFKFLMMTKPGSS 138
+L + + L S+ +G V+K ++ V LP + L + G+
Sbjct: 137 MLANAMEGHVLPL-SLQMYGCRVVQKAVEYV--LPEQQSAFVKELDVNVLRCVKDANGNH 193
Query: 139 VILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 198
V+ + +E + F+ QA + L+ H GC L +++ + + +L +
Sbjct: 194 VVQKLIERVAPERLTFV-QAFRGNVYELSTHPYGCRVLQRCFEHLPEEQTRPLLDELHKY 252
Query: 199 AASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKCL--KYQN 256
+L + + GNYVVQ VL P I LRG ++++ K S V +K L
Sbjct: 253 IINLMQDQFGNYVVQFVLEHGTPHDRAVIISKLRGQMLNMARHKFASNVCEKALITAESE 312
Query: 257 AVHYIIEELLNSDQ-----ILQVANDKYGNYVIQTALAETMRQDRLSVHQRLVTKLQQHL 311
+ +IEE++ IL + D++ NYV+Q AL+ + + + L++K++ L
Sbjct: 313 SRRLLIEEIMTPKHDGVSPILAMMKDQFANYVLQRALSVVEGEQK----EVLISKVRPQL 368
Query: 312 AALRVMKYGSNVYKWTTA 329
+R +Y S K A
Sbjct: 369 MNMR--RYSSAYSKHLMA 384
>gi|238878269|gb|EEQ41907.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 965
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 153/324 (47%), Gaps = 43/324 (13%)
Query: 13 DLFSLAQDQEGSQYLQENLSSG-----DSRI--LDKLFWVVSGFTFELMSGQYGRFVFGK 65
++ LA+DQ G ++LQ+ + R+ + +F + +EL+ +G ++ K
Sbjct: 286 EILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFGNYLIQK 345
Query: 66 FIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV--AHLPPLLYHVMSAL 123
I CNES L L++ Q LF + S+++ G+ +++K+I + +H LL + L
Sbjct: 346 LIVYCNESNLDLLME--ILQYNLFQI-SINQHGTRALQKIIDSLNNSHQLGLL---IKGL 399
Query: 124 KRLFKFLMMTKPGSSVILQCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 183
K L+ G+ VI + L FIY + ++ +A H+ GC L ++++
Sbjct: 400 KPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNHV 459
Query: 184 K----GSRRKQILHLISVNAASLSRHRSGNYVVQHVLSLEDPFLIDAICFALRGHYVDLS 239
G + IL N L + GNYV+Q+++S+ +D I F + ++V+
Sbjct: 460 TLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLISINS---LD-INFQIFQNFVNFG 513
Query: 240 LT-----KCGSFVVQKCLK-----------YQNAVHYIIEELLNSDQILQVANDKYGNYV 283
++ K S VV+K LK + N +I +L SD + + ND YGNYV
Sbjct: 514 ISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSD-LNVLINDPYGNYV 572
Query: 284 IQTALAETMRQDRLSVHQRLVTKL 307
IQT + + M +++ + KL
Sbjct: 573 IQT-MIDIMVNPQVNYQNNNIDKL 595
>gi|72391604|ref|XP_846096.1| pumilio/PUF RNA binding protein 5 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62175648|gb|AAX69780.1| pumilio/PUF RNA binding protein 5, putative [Trypanosoma brucei]
gi|70802632|gb|AAZ12537.1| pumilio/PUF RNA binding protein 5, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 430
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 93 SVDKFGSSSVKKLIKVVAH--LPPLLYHVMSALKRLFKFLMMTKPGSSVILQCLEPSYNH 150
++D G V+ L++ + + L+ H +L R L ++ P + +LQ + H
Sbjct: 186 ALDSNGCHVVRALVEFIPTGLMATLVPHFTPSLVR---DLAVSSPYTRRVLQSV--FERH 240
Query: 151 KNDF---IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRS 207
K+D I +A + LA +QGCI + I+N +++ I+ + +L+ +
Sbjct: 241 KSDALTPIVEAIAQDSQLLAQRQQGCITIIRTIENTLPHQQRFIISRLLPALPALTMNCY 300
Query: 208 GNYVVQHVLSLEDPFLID-AICFALRGHYVDLSLTKCGSFVVQKCLKYQNAVHY---IIE 263
GNYVVQ VL DP + +C A GH+V LS K S VV+K ++ I E
Sbjct: 301 GNYVVQCVLHHMDPEAVTVVVCHAFAGHWVALSCNKFASNVVEKVVRVLEGPARRALIAE 360
Query: 264 ELLNSDQILQVANDKYGNYVIQ 285
+ + + ++ ND +GN+V+Q
Sbjct: 361 TVCDPVNLRRLMNDCFGNFVLQ 382
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,711,589,685
Number of Sequences: 23463169
Number of extensions: 174896299
Number of successful extensions: 532207
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 562
Number of HSP's that attempted gapping in prelim test: 519752
Number of HSP's gapped (non-prelim): 4114
length of query: 335
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 192
effective length of database: 9,003,962,200
effective search space: 1728760742400
effective search space used: 1728760742400
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)