BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035755
(72 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50026|DNAJ_SYNE7 Chaperone protein DnaJ OS=Synechococcus elongatus (strain PCC
7942) GN=dnaJ PE=3 SV=2
Length = 287
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
LLG P ++ + + +KAA+++ +CHPDL P R+ AE +FK ISEAY L
Sbjct: 10 LLGIPQSA--DQAAIKAAFRKLARQCHPDLNPGDRQ--AEERFKQISEAYEIL 58
>sp|B9KAB9|DNAJ_THENN Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P N+ +++ AYKR V E HPD P RK +AE +FK I EAY L
Sbjct: 11 ILGVPRNA--TQEEIRKAYKRLVKEWHPDRHPENRK-EAEQRFKEIQEAYEVL 60
>sp|P39101|CAJ1_YEAST Protein CAJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=CAJ1 PE=1 SV=1
Length = 391
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P + P +++K AY+RK E HPD P DA++KF+ + EAY L
Sbjct: 10 ILGIKPEATP--TEIKKAYRRKAMETHPDKHP--DDPDAQAKFQAVGEAYQVL 58
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein DnaJ OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1
Length = 369
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P ++ ++K AYKR V E HPD P RK +AE +FK I EAY L
Sbjct: 11 ILGVPRDA--TQEEIKRAYKRLVKEWHPDRHPENRK-EAEQRFKEIQEAYEVL 60
>sp|B1LCI2|DNAJ_THESQ Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ
PE=3 SV=1
Length = 369
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P ++ ++K AYKR V E HPD P RK +AE +FK I EAY L
Sbjct: 11 ILGVPRDA--TQEEIKRAYKRLVKEWHPDRHPENRK-EAEQRFKEIQEAYEVL 60
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589
/ MSB8 / DSM 3109 / JCM 10099) GN=dnaJ PE=3 SV=1
Length = 369
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P ++ ++K AYKR V E HPD P RK +AE +FK I EAY L
Sbjct: 11 ILGVPRDA--TQEEIKRAYKRLVKEWHPDRHPENRK-EAEQRFKEIQEAYEVL 60
>sp|Q2GLU9|DNAJ_ANAPZ Chaperone protein DnaJ OS=Anaplasma phagocytophilum (strain HZ)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 22 QVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
++K +Y++KV+E HPD P G K +AE KFK ISEAY L
Sbjct: 20 EIKKSYRKKVFEYHPDRNP-GNK-EAEEKFKKISEAYDVL 57
>sp|Q6AEC0|DNAJ_LEIXX Chaperone protein DnaJ OS=Leifsonia xyli subsp. xyli (strain
CTCB07) GN=dnaJ PE=3 SV=1
Length = 369
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG N+ P+ ++K AY+R E HPD+ P T+A+ +FKL++ AY L
Sbjct: 7 VLGVERNATPD--EIKKAYRRLARELHPDVNP---STEAQERFKLVTHAYDVL 54
>sp|Q5P9E0|DNAJ_ANAMM Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 1 MQGDEARVLLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTY 60
M G++ +L N+ +A ++K +Y++ V++ HPD P +K AE KFK ISEAY
Sbjct: 1 MSGNDYYEILEVSRNA--SAEEIKKSYRKMVFKYHPDKNPGDKK--AEEKFKKISEAYEV 56
Query: 61 L 61
L
Sbjct: 57 L 57
>sp|B9KH92|DNAJ_ANAMF Chaperone protein DnaJ OS=Anaplasma marginale (strain Florida)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 1 MQGDEARVLLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTY 60
M G++ +L N+ +A ++K +Y++ V++ HPD P +K AE KFK ISEAY
Sbjct: 1 MSGNDYYEILEVSRNA--SAEEIKKSYRKMVFKYHPDKNPGDKK--AEEKFKKISEAYEV 56
Query: 61 L 61
L
Sbjct: 57 L 57
>sp|Q9Y7T9|YCJD_SCHPO Uncharacterized J domain-containing protein C63.13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC63.13 PE=3 SV=1
Length = 208
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 8 VLLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYLLSGN 65
+L P + +A ++K AYK+ E HPD + A +F+L++EAY Y+LS N
Sbjct: 7 AILNITP--KASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAY-YVLSDN 61
>sp|Q56237|DNAJ2_THET8 Chaperone protein DnaJ 2 OS=Thermus thermophilus (strain HB8 /
ATCC 27634 / DSM 579) GN=dnaJ2 PE=3 SV=2
Length = 280
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P N+ ++K AYKR + HPD V + +AE KFK I+EAY L
Sbjct: 10 ILGVPRNA--TQEEIKRAYKRLARQYHPD---VNKSPEAEEKFKEINEAYAVL 57
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5)
GN=dnaJ2 PE=3 SV=1
Length = 376
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P N+ + ++K AY+R V + HPD + +K + E KFK I+EAY L
Sbjct: 12 ILGVPRNA--SQEEIKKAYRRLVRKYHPD---ICKKPECEEKFKEINEAYQVL 59
>sp|Q5HCG4|DNAJ_EHRRW Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain
Welgevonden) GN=dnaJ PE=3 SV=1
Length = 382
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYLL 62
LLG N+ P ++K AY++ + HPD P G K AE KFK +SEAY L+
Sbjct: 9 LLGLSKNATP--EEIKKAYRKMALKYHPDKNP-GDKA-AEEKFKELSEAYDVLI 58
>sp|Q5FGQ8|DNAJ_EHRRG Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Gardel)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYLL 62
LLG N+ P ++K AY++ + HPD P G K AE KFK +SEAY L+
Sbjct: 9 LLGLSKNATP--EEIKKAYRKMALKYHPDKNP-GDKA-AEEKFKELSEAYDVLI 58
>sp|A4XKA5|DNAJ_CALS8 Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1
Length = 387
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P N+ ++K AY+R + HPD P G K +AE KFK I+EAY L
Sbjct: 10 ILGVPRNA--TQEEIKRAYRRLAKQYHPDANP-GNK-EAEEKFKEINEAYEVL 58
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P N+ ++K AY+R + HPD P G K +AE KFK I+EAY L
Sbjct: 10 ILGVPRNA--TEEEIKRAYRRLAKQYHPDANP-GNK-EAEEKFKEINEAYEVL 58
>sp|Q2VYT0|DNAJ_MAGSA Chaperone protein DnaJ OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=dnaJ PE=3 SV=1
Length = 383
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
LLG + P+ +K AY+++ + HPD P DAE KFK I+EAY L
Sbjct: 9 LLGVEKGASPD--DIKKAYRKQAMQFHPDRNP--GNADAEQKFKEINEAYDVL 57
>sp|Q70WY6|DNAJ_FUSNP Chaperone protein DnaJ OS=Fusobacterium nucleatum subsp.
polymorphum GN=dnaJ PE=3 SV=1
Length = 394
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVG---RKTDAESKFKLISEAYTYL 61
+LG N+ N +K AY++ + HPD F K DAE KFK I+EAY L
Sbjct: 9 VLGVDKNASEN--DIKKAYRKAAMKYHPDKFANATDAEKKDAEEKFKEINEAYQVL 62
>sp|Q8D2Q6|DNAJ_WIGBR Chaperone protein DnaJ OS=Wigglesworthia glossinidia brevipalpis
GN=dnaJ PE=3 SV=1
Length = 374
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYLL 62
+LG N+ + ++K AYKR + HPD P +AESKFK I EAY LL
Sbjct: 9 ILGISKNA--SDREIKTAYKRLAVKFHPDRNP--GNLEAESKFKEIKEAYEVLL 58
>sp|Q97BG9|DNAJ_THEVO Chaperone protein DnaJ OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 19 NASQ--VKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
NAS+ +K A++ + HPDL P K +AE KFK ISEAY L
Sbjct: 14 NASEEDIKKAFRELAKKWHPDLHP-DNKAEAEEKFKEISEAYEVL 57
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2
SV=1
Length = 397
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P++ P ++K AY++ + HPD P D KFKLIS+AY L
Sbjct: 10 ILGVKPSASP--EEIKKAYRKLALKYHPDKNP-----DEGEKFKLISQAYEVL 55
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1
SV=1
Length = 397
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P++ P ++K AY++ + HPD P D KFKLIS+AY L
Sbjct: 10 ILGVKPSASP--EEIKKAYRKLALKYHPDKNP-----DEGEKFKLISQAYEVL 55
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 19 NASQ--VKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
NASQ +K AY+R + HPDL P G K +AE KFK I+EAY L
Sbjct: 15 NASQEEIKKAYRRLAKKYHPDLNP-GDK-EAEQKFKEINEAYEIL 57
>sp|B1YKT0|DNAJ_EXIS2 Chaperone protein DnaJ OS=Exiguobacterium sibiricum (strain DSM
17290 / JCM 13490 / 255-15) GN=dnaJ PE=3 SV=1
Length = 368
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 19 NASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYLLSGN 65
+A+++K AY++ HPD V ++ DA+ KFK +SEAY L N
Sbjct: 17 SAAEIKRAYRKLARTYHPD---VNKEADADQKFKELSEAYEVLSDDN 60
>sp|Q3YT99|DNAJ_EHRCJ Chaperone protein DnaJ OS=Ehrlichia canis (strain Jake) GN=dnaJ
PE=3 SV=1
Length = 382
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYLL 62
LLG N+ + ++K AY++ + HPD P G K +AE KFK +SEAY L+
Sbjct: 9 LLGVSKNA--TSEEIKKAYRKMALKYHPDTNP-GNK-EAEEKFKELSEAYDVLI 58
>sp|A5UYW4|DNAJ_ROSS1 Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ
PE=3 SV=1
Length = 370
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 19 NASQ--VKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
NASQ +K A++R + HPD V + DAE+KFK I+EAY L
Sbjct: 16 NASQDEIKKAFRRLARQYHPD---VNKAPDAEAKFKEINEAYEVL 57
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P N+ + ++K AY+R V + HPDL + A KFK I+EAY L
Sbjct: 10 ILGVPRNATQD--EIKQAYRRLVRQYHPDL---NKDPSAHEKFKEINEAYEVL 57
>sp|A1AW21|DNAJ_RUTMC Chaperone protein DnaJ OS=Ruthia magnifica subsp. Calyptogena
magnifica GN=dnaJ PE=3 SV=1
Length = 364
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG N+ +A Q+K AYKR + HPD K AE KFK I +AY L
Sbjct: 9 ILGVAKNA--DAKQIKKAYKRLAMKHHPDRVK-NDKASAEKKFKEIQKAYAIL 58
>sp|A7NS65|DNAJ_ROSCS Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=dnaJ PE=3 SV=1
Length = 370
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 19 NASQ--VKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
NASQ +K A++R + HPD V + DAE+KFK I+EAY L
Sbjct: 16 NASQDEIKKAFRRLARQYHPD---VNKAPDAEAKFKEINEAYEVL 57
>sp|Q5XGU5|DNJ6B_XENLA DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-b
PE=2 SV=1
Length = 245
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG NS P+ +K AY+R + HPD P K +AE +FK ++EAY L
Sbjct: 7 VLGVQRNSSPD--DIKKAYRRLALKWHPDKNP-DNKEEAERRFKEVAEAYEVL 56
>sp|Q2GI75|DNAJ_EHRCR Chaperone protein DnaJ OS=Ehrlichia chaffeensis (strain Arkansas)
GN=dnaJ PE=3 SV=1
Length = 380
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYLL 62
LLG ++ P ++K AY++ + HPD P G K +AE KFK +SEAY L+
Sbjct: 9 LLGVSKSATP--EEIKKAYRKMALKYHPDKNP-GNK-EAEEKFKELSEAYDVLI 58
>sp|Q6ME07|DNAJ_PARUW Chaperone protein DnaJ OS=Protochlamydia amoebophila (strain
UWE25) GN=dnaJ PE=3 SV=1
Length = 386
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 22 QVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
++K AY++K + HPD P DAE +FK ISEAY L
Sbjct: 18 EIKKAYRKKAVQYHPDKNP--GDADAEKRFKEISEAYEVL 55
>sp|Q9LCQ4|DNAJ_BRECH Chaperone protein DnaJ OS=Brevibacillus choshinensis GN=dnaJ PE=3
SV=1
Length = 375
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 19 NASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+A ++K AY++ + HPD V + DAE KFK + EAY L
Sbjct: 16 DADEIKKAYRKLARQYHPD---VNKAADAEEKFKEVKEAYDVL 55
>sp|Q493S6|DNAJ_BLOPB Chaperone protein DnaJ OS=Blochmannia pennsylvanicus (strain
BPEN) GN=dnaJ PE=3 SV=1
Length = 375
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG N+ + ++K +YKR + HPD P T AE+KFK I EAY L
Sbjct: 9 ILGISKNA--DEREIKKSYKRLAMKFHPDRNP--GNTTAETKFKEIKEAYEVL 57
>sp|B0KK26|CBPA_PSEPG Curved DNA-binding protein OS=Pseudomonas putida (strain GB-1)
GN=cbpA PE=3 SV=1
Length = 318
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P + A +KAAY++ + HPD V ++ DAE KFK +EAY L
Sbjct: 9 ILGVEPTADDKA--IKAAYRKLARKYHPD---VSKERDAEDKFKEANEAYEVL 56
>sp|Q8NHS0|DNJB8_HUMAN DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1
SV=1
Length = 232
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG ++ P +K AY++ HPD P K +AE KFKL+SEAY L
Sbjct: 7 VLGVQASASPE--DIKKAYRKLALRWHPDKNP-DNKEEAEKKFKLVSEAYEVL 56
>sp|Q9HJ83|DNAJ_THEAC Chaperone protein DnaJ OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 22 QVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
++K A++ + HPDL P K +AE KFK ISEAY L
Sbjct: 19 EIKKAFRELAKKWHPDLHP-ENKQEAEEKFKEISEAYEVL 57
>sp|P25686|DNJB2_HUMAN DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=1
SV=3
Length = 324
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 19 NASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+A +K AY+RK + HPD P ++ AE KFK ++EAY L
Sbjct: 15 SADDIKKAYRRKALQWHPDKNPDNKEF-AEKKFKEVAEAYEVL 56
>sp|Q8RH03|DNAJ_FUSNN Chaperone protein DnaJ OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=dnaJ PE=3 SV=1
Length = 392
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVG---RKTDAESKFKLISEAYTYL 61
+LG ++ N +K AY++ + HPD F K DAE KFK I+EAY L
Sbjct: 9 VLGIDKSASEN--DIKKAYRKAAMKYHPDKFANASDAEKKDAEEKFKEINEAYQIL 62
>sp|O94657|XDJ1_SCHPO DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=xdj1 PE=4 SV=1
Length = 413
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 19 NASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+A ++K +YKR HPD P+ K +A +F+ + EAY L
Sbjct: 18 SAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDIL 60
>sp|B1J5W7|CBPA_PSEPW Curved DNA-binding protein OS=Pseudomonas putida (strain W619)
GN=cbpA PE=3 SV=1
Length = 317
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P + A +KAAY++ + HPD V ++ DAE KFK +EAY L
Sbjct: 9 ILGVEPTADEKA--IKAAYRKLARKYHPD---VSKERDAEEKFKEANEAYEVL 56
>sp|Q88DH7|CBPA_PSEPK Curved DNA-binding protein OS=Pseudomonas putida (strain KT2440)
GN=cbpA PE=3 SV=1
Length = 319
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P + A +KAAY++ + HPD V ++ DAE KFK +EAY L
Sbjct: 9 ILGVEPTADEKA--IKAAYRKLARKYHPD---VSKERDAEEKFKEANEAYEVL 56
>sp|A5W9N6|CBPA_PSEP1 Curved DNA-binding protein OS=Pseudomonas putida (strain F1 /
ATCC 700007) GN=cbpA PE=3 SV=1
Length = 319
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG P + A +KAAY++ + HPD V ++ DAE KFK +EAY L
Sbjct: 9 ILGVEPTADEKA--IKAAYRKLARKYHPD---VSKERDAEEKFKEANEAYEVL 56
>sp|Q8EUM4|DNAJ_MYCPE Chaperone protein DnaJ OS=Mycoplasma penetrans (strain HF-2)
GN=dnaJ PE=3 SV=1
Length = 388
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 22 QVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
Q+K+A+++K + HPD ++ DAE KFK +++AY L
Sbjct: 21 QIKSAFRKKAMQYHPDR---NKEPDAEEKFKEVNQAYEVL 57
>sp|Q6D0B8|DNAJ_ERWCT Chaperone protein DnaJ OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=dnaJ PE=3 SV=1
Length = 379
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 22 QVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYLL 62
++K AYKR + HPD P ++AE+KFK I EAY L+
Sbjct: 20 EIKKAYKRLAMKYHPDRNP--GDSEAEAKFKEIKEAYEILI 58
>sp|C0ZB49|DNAJ_BREBN Chaperone protein DnaJ OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=dnaJ PE=3 SV=1
Length = 375
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 19 NASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+A ++K AY++ + HPD V ++ DAE KFK + +AY L
Sbjct: 16 DADEIKKAYRKLARQYHPD---VNKEADAEEKFKEVKDAYDIL 55
>sp|C6DF09|DNAJ_PECCP Chaperone protein DnaJ OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=dnaJ PE=3 SV=1
Length = 378
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 22 QVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYLL 62
++K AYKR + HPD P ++AE+KFK I EAY L+
Sbjct: 20 EIKKAYKRLAMKYHPDRNP--GDSEAEAKFKEIKEAYEILI 58
>sp|Q2S030|DNAJ_SALRD Chaperone protein DnaJ OS=Salinibacter ruber (strain DSM 13855 /
M31) GN=dnaJ PE=3 SV=1
Length = 388
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 22 QVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
++K AY++K E HPD P +AE KFK SEAY L
Sbjct: 19 EIKKAYRKKAMEYHPDRNP--DDPEAEQKFKEASEAYEVL 56
>sp|C4K3I5|DNAJ_HAMD5 Chaperone protein DnaJ OS=Hamiltonella defensa subsp.
Acyrthosiphon pisum (strain 5AT) GN=dnaJ PE=3 SV=1
Length = 371
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 9 LLGFPPNSRPNASQVKAAYKRKVWECHPDLFPVGRKTDAESKFKLISEAYTYL 61
+LG N+ N +K AYKR + HPD + DAE+KFK + EAY L
Sbjct: 9 ILGIAKNA--NEQDIKDAYKRLAKKYHPDR---NKDKDAETKFKEMKEAYEVL 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,797,242
Number of Sequences: 539616
Number of extensions: 814912
Number of successful extensions: 2632
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 659
Number of HSP's that attempted gapping in prelim test: 2213
Number of HSP's gapped (non-prelim): 677
length of query: 72
length of database: 191,569,459
effective HSP length: 44
effective length of query: 28
effective length of database: 167,826,355
effective search space: 4699137940
effective search space used: 4699137940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)