BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035757
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZZ8|BCH1_ARATH Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis
thaliana GN=BETA-OHASE 1 PE=1 SV=1
Length = 310
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 63/67 (94%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
+AYMFVHDGLVH+RFPVGPIA VPYLRKVAAAHQLHH++KFNG+PYGLFLGP+ELEEV G
Sbjct: 224 IAYMFVHDGLVHKRFPVGPIADVPYLRKVAAAHQLHHTDKFNGVPYGLFLGPKELEEVGG 283
Query: 61 TEGLDKE 67
E LDKE
Sbjct: 284 NEELDKE 290
>sp|B3SGL0|BCH_GENLU Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea GN=BHY
PE=2 SV=1
Length = 320
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 60/67 (89%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
MAYMFVHDGLVH+RFPVGPIA VPY R+VAAAH LHHS+KFNG+PYGLFLGP+ELEEV G
Sbjct: 244 MAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHTLHHSDKFNGVPYGLFLGPKELEEVGG 303
Query: 61 TEGLDKE 67
+ L+ E
Sbjct: 304 LQVLEME 310
>sp|O49815|BCH1_CAPAN Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum
GN=CA1 PE=1 SV=1
Length = 315
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 61/68 (89%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
MAYMFVHDGLVH+RFPVGPIA VPY ++VAAAHQLHHS+KF+G+PYGLFLGP+ELEEV
Sbjct: 238 MAYMFVHDGLVHKRFPVGPIAKVPYFQRVAAAHQLHHSDKFDGVPYGLFLGPKELEEVGV 297
Query: 61 TEGLDKET 68
E L+KE
Sbjct: 298 IEELEKEV 305
>sp|Q9LTG0|BCH2_ARATH Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis
thaliana GN=BETA-OHASE 2 PE=2 SV=1
Length = 303
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
MAYMFVHDGLVH+RFPVGPIA+VPYLRKVAAAHQLHH++KF G+PYGLFLGP+E+EEV G
Sbjct: 222 MAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGVPYGLFLGPKEVEEVGG 281
Query: 61 TEGLDKE 67
E L+KE
Sbjct: 282 KEELEKE 288
>sp|O49814|BCH2_CAPAN Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum
annuum GN=CA2 PE=2 SV=1
Length = 316
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 52/53 (98%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQ 53
MAYMFVHDGLVH+RFPVGP+A+VPYLRKVAAAH LHHSEKFNG+PYGLFLGP+
Sbjct: 239 MAYMFVHDGLVHKRFPVGPVANVPYLRKVAAAHSLHHSEKFNGVPYGLFLGPK 291
>sp|Q9SPK6|BCH_HAEPL Beta-carotene 3-hydroxylase, chloroplastic (Fragment)
OS=Haematococcus pluvialis GN=CRTZ PE=2 SV=1
Length = 322
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEKFNGLPYGLFLGPQELEEVEG 60
MAYMFVHDGLVHRRFP GPIA +PY++++ AHQLHHS K+ G P+G+FLGPQEL+ + G
Sbjct: 246 MAYMFVHDGLVHRRFPTGPIAGLPYMKRLTVAHQLHHSGKYGGAPWGMFLGPQELQHIPG 305
Query: 61 T 61
Sbjct: 306 A 306
>sp|Q01332|CRTZ_ESCVU Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=3 SV=1
Length = 176
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEK 40
+ Y VHDGLVH+R+P I YL+++ AH+LHH+ +
Sbjct: 86 LLYFLVHDGLVHQRWPFHWIPRRGYLKRLYVAHRLHHAVR 125
>sp|P21688|CRTZ_PANAN Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=3 SV=1
Length = 175
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHSEK 40
+ Y VHDGLVH+R+P I YL+++ AH++HH+ +
Sbjct: 88 LLYFMVHDGLVHQRWPFRYIPRKGYLKRLYMAHRMHHAVR 127
>sp|Q44262|CRTZ_PARS1 Beta-carotene hydroxylase OS=Paracoccus sp. (strain PC1) GN=crtZ
PE=3 SV=1
Length = 162
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHS 38
+ Y +HDGLVH+R+P I Y R++ AH+LHH+
Sbjct: 86 LIYFILHDGLVHQRWPFRYIPRRGYFRRLYQAHRLHHA 123
>sp|P54973|CRTZ_PARSN Beta-carotene hydroxylase OS=Paracoccus sp. (strain N81106 / MBIC
01143) GN=crtZ PE=3 SV=1
Length = 162
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 1 MAYMFVHDGLVHRRFPVGPIAHVPYLRKVAAAHQLHHS 38
+ Y +HDGLVH+R+P I Y R++ AH+LHH+
Sbjct: 86 LIYFVLHDGLVHQRWPFRYIPRKGYARRLYQAHRLHHA 123
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.142 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,865,471
Number of Sequences: 539616
Number of extensions: 1038600
Number of successful extensions: 1802
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1792
Number of HSP's gapped (non-prelim): 11
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)