Query 035761
Match_columns 560
No_of_seqs 634 out of 4984
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 10:04:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035761.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035761hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 3E-54 1E-58 424.7 15.0 240 315-558 24-282 (350)
2 4fih_A Serine/threonine-protei 100.0 1.6E-53 5.5E-58 418.9 19.0 236 315-559 74-330 (346)
3 3fpq_A Serine/threonine-protei 100.0 7.4E-53 2.5E-57 406.3 20.5 236 318-560 29-290 (290)
4 4aw0_A HPDK1, 3-phosphoinositi 100.0 1E-52 3.4E-57 407.0 17.7 237 315-557 32-295 (311)
5 4fie_A Serine/threonine-protei 100.0 2.2E-52 7.5E-57 420.9 20.3 236 315-559 151-407 (423)
6 3omv_A RAF proto-oncogene seri 100.0 2.2E-52 7.6E-57 405.8 18.0 232 314-553 35-294 (307)
7 3ubd_A Ribosomal protein S6 ki 100.0 4.7E-53 1.6E-57 409.5 10.8 238 315-558 24-287 (304)
8 4gt4_A Tyrosine-protein kinase 100.0 2.9E-52 1E-56 406.9 16.2 235 315-553 26-300 (308)
9 3hyh_A Carbon catabolite-derep 100.0 6.2E-52 2.1E-56 396.2 17.7 236 315-558 13-268 (275)
10 4aoj_A High affinity nerve gro 100.0 7.5E-52 2.6E-56 407.9 18.6 234 315-553 41-313 (329)
11 4asz_A BDNF/NT-3 growth factor 100.0 2.8E-52 9.4E-57 405.4 14.1 233 315-552 13-282 (299)
12 4g3f_A NF-kappa-beta-inducing 100.0 6.3E-51 2.1E-55 399.3 16.1 225 315-552 58-309 (336)
13 4g31_A Eukaryotic translation 100.0 6.2E-50 2.1E-54 389.6 17.6 237 315-558 5-285 (299)
14 4ase_A Vascular endothelial gr 100.0 2.7E-50 9.1E-55 400.0 14.7 242 308-553 57-341 (353)
15 3hmm_A TGF-beta receptor type- 100.0 2.8E-49 9.5E-54 387.0 17.3 198 315-520 3-219 (303)
16 4b99_A Mitogen-activated prote 100.0 3.1E-48 1.1E-52 391.9 18.9 236 315-557 54-349 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.7E-47 5.8E-52 382.6 18.5 233 313-558 19-358 (361)
18 3v5w_A G-protein coupled recep 100.0 3.2E-46 1.1E-50 392.5 19.1 235 315-557 189-454 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 1.2E-45 3.9E-50 391.5 19.7 236 315-558 157-416 (573)
20 3fe3_A MAP/microtubule affinit 100.0 3.8E-44 1.3E-48 355.8 19.1 238 314-558 14-270 (328)
21 3fxz_A Serine/threonine-protei 100.0 1.3E-43 4.4E-48 347.8 22.0 237 314-559 19-276 (297)
22 2c30_A Serine/threonine-protei 100.0 5.8E-43 2E-47 347.0 23.0 248 302-558 22-300 (321)
23 3niz_A Rhodanese family protei 100.0 2E-43 6.9E-48 348.8 19.3 239 314-558 20-306 (311)
24 1o6l_A RAC-beta serine/threoni 100.0 5.1E-43 1.7E-47 348.7 22.0 237 315-557 5-265 (337)
25 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.1E-43 1.1E-47 352.5 17.6 238 314-557 22-285 (353)
26 3soa_A Calcium/calmodulin-depe 100.0 9.2E-43 3.1E-47 359.1 20.8 240 313-558 9-273 (444)
27 1ob3_A PFPK5, cell division co 100.0 3.7E-43 1.3E-47 343.3 16.9 238 315-558 2-286 (288)
28 2yab_A Death-associated protei 100.0 1.6E-42 5.5E-47 348.2 21.3 238 314-558 11-278 (361)
29 3zgw_A Maternal embryonic leuc 100.0 3.6E-43 1.2E-47 350.7 16.3 237 314-557 9-265 (347)
30 4dc2_A Protein kinase C IOTA t 100.0 8.6E-43 3E-47 353.2 18.5 238 314-557 51-323 (396)
31 3p86_A Serine/threonine-protei 100.0 8.3E-43 2.8E-47 343.8 17.1 236 313-552 35-291 (309)
32 3a8x_A Protein kinase C IOTA t 100.0 2.4E-42 8.3E-47 345.3 20.4 238 315-558 9-281 (345)
33 1xjd_A Protein kinase C, theta 100.0 1.2E-42 4.1E-47 346.9 17.8 239 313-557 15-274 (345)
34 1tki_A Titin; serine kinase, m 100.0 2.4E-42 8.3E-47 342.3 19.8 236 314-558 4-263 (321)
35 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.5E-42 5E-47 345.0 17.8 236 315-558 9-264 (336)
36 1fot_A TPK1 delta, CAMP-depend 100.0 3.8E-42 1.3E-46 339.9 20.7 235 315-558 6-264 (318)
37 2bdw_A Hypothetical protein K1 100.0 2.3E-42 8E-47 348.0 19.5 239 313-558 27-290 (362)
38 3o0g_A Cell division protein k 100.0 2.1E-42 7E-47 338.7 18.4 238 315-558 2-288 (292)
39 3c0i_A Peripheral plasma membr 100.0 2.7E-42 9.1E-47 346.5 19.1 242 314-558 23-292 (351)
40 4agu_A Cyclin-dependent kinase 100.0 3.6E-42 1.2E-46 340.1 19.5 238 315-558 3-290 (311)
41 4aw2_A Serine/threonine-protei 100.0 1.3E-42 4.4E-47 356.6 16.8 245 308-557 67-343 (437)
42 3tki_A Serine/threonine-protei 100.0 1.7E-42 5.7E-47 343.9 16.8 237 315-558 7-267 (323)
43 3v8s_A RHO-associated protein 100.0 8.4E-43 2.9E-47 355.3 14.8 242 310-558 64-335 (410)
44 3uim_A Brassinosteroid insensi 100.0 1.1E-42 3.7E-47 346.3 14.8 252 302-554 17-306 (326)
45 2i0e_A Protein kinase C-beta I 100.0 4.5E-42 1.5E-46 343.8 19.3 238 314-557 19-281 (353)
46 2y0a_A Death-associated protei 100.0 6.9E-42 2.3E-46 340.0 20.2 238 314-558 10-277 (326)
47 3p1a_A MYT1 kinase, membrane-a 100.0 5.8E-42 2E-46 338.4 19.2 237 315-559 57-311 (311)
48 3kn6_A Ribosomal protein S6 ki 100.0 3.8E-42 1.3E-46 341.6 17.6 228 320-558 16-276 (325)
49 1rdq_E PKA C-alpha, CAMP-depen 100.0 9.3E-42 3.2E-46 341.6 20.4 234 315-557 41-298 (350)
50 3qd2_B Eukaryotic translation 100.0 3.4E-42 1.2E-46 343.6 17.1 241 314-558 5-331 (332)
51 2zv2_A Calcium/calmodulin-depe 100.0 4E-42 1.4E-46 337.6 17.3 236 315-557 13-297 (298)
52 3a62_A Ribosomal protein S6 ki 100.0 3.5E-42 1.2E-46 342.3 16.9 238 315-558 17-282 (327)
53 4fr4_A YANK1, serine/threonine 100.0 1.2E-41 3.9E-46 343.9 20.4 236 315-557 15-276 (384)
54 3gni_B Strad alpha; kinase fol 100.0 1.1E-41 3.7E-46 347.5 20.4 241 314-558 24-339 (389)
55 2pmi_A Negative RE, cyclin-dep 100.0 5.3E-42 1.8E-46 339.6 17.2 240 314-558 4-299 (317)
56 1kob_A Twitchin; kinase, intra 100.0 1.9E-41 6.5E-46 343.5 21.0 237 314-558 50-310 (387)
57 3cok_A Serine/threonine-protei 100.0 1.4E-41 4.7E-46 330.3 18.7 239 315-558 11-268 (278)
58 3s95_A LIMK-1, LIM domain kina 100.0 4.1E-41 1.4E-45 332.4 22.3 231 315-552 10-275 (310)
59 2vd5_A DMPK protein; serine/th 100.0 5.3E-42 1.8E-46 349.6 16.3 244 308-557 54-332 (412)
60 4ejn_A RAC-alpha serine/threon 100.0 4.3E-42 1.5E-46 356.5 15.9 238 315-558 148-410 (446)
61 2y94_A 5'-AMP-activated protei 100.0 1.7E-41 5.7E-46 351.9 19.8 236 315-557 16-271 (476)
62 3kk8_A Calcium/calmodulin depe 100.0 2.4E-41 8.2E-46 329.7 19.8 238 314-558 5-267 (284)
63 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.2E-42 1.8E-46 341.5 14.8 238 314-558 33-324 (329)
64 4aaa_A Cyclin-dependent kinase 100.0 9.6E-42 3.3E-46 340.1 16.4 238 315-558 25-312 (331)
65 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-41 5.1E-46 340.7 17.5 234 314-558 52-311 (349)
66 2acx_A G protein-coupled recep 100.0 2.1E-41 7.2E-46 355.6 19.4 240 314-558 183-450 (576)
67 3dls_A PAS domain-containing s 100.0 7.4E-42 2.5E-46 340.9 14.6 239 313-558 22-280 (335)
68 3oz6_A Mitogen-activated prote 100.0 2.1E-41 7.1E-46 345.2 17.9 237 313-557 7-333 (388)
69 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.6E-41 1.2E-45 353.2 20.1 241 315-558 185-454 (543)
70 2qkw_B Protein kinase; three-h 100.0 1.1E-41 3.9E-46 338.1 15.6 243 306-553 30-309 (321)
71 3dbq_A Dual specificity protei 100.0 1.4E-41 4.9E-46 340.4 16.3 236 315-558 9-279 (343)
72 4euu_A Serine/threonine-protei 100.0 3.9E-41 1.3E-45 333.9 19.1 235 315-554 9-304 (319)
73 3uc3_A Serine/threonine-protei 100.0 1.6E-41 5.5E-46 341.9 16.4 234 314-557 19-279 (361)
74 3mtl_A Cell division protein k 100.0 6.4E-42 2.2E-46 340.2 13.2 237 315-558 2-287 (324)
75 2a2a_A Death-associated protei 100.0 5.8E-41 2E-45 332.9 20.0 238 314-558 11-278 (321)
76 2qr7_A Ribosomal protein S6 ki 100.0 1.5E-41 5E-46 339.3 15.6 234 313-558 20-283 (342)
77 2psq_A Fibroblast growth facto 100.0 3E-41 1E-45 341.1 17.9 236 314-553 80-358 (370)
78 3llt_A Serine/threonine kinase 100.0 1.6E-41 5.4E-46 342.7 15.9 241 306-557 26-360 (360)
79 3fdn_A Serine/threonine-protei 100.0 3.9E-41 1.3E-45 327.4 17.6 237 314-558 8-263 (279)
80 3ttj_A Mitogen-activated prote 100.0 3.6E-41 1.2E-45 350.0 18.3 234 314-557 61-360 (464)
81 2rku_A Serine/threonine-protei 100.0 8.9E-41 3E-45 327.4 19.9 238 315-558 15-271 (294)
82 2x4f_A Myosin light chain kina 100.0 4E-41 1.4E-45 340.2 17.8 233 318-558 92-348 (373)
83 4eqm_A Protein kinase; transfe 100.0 5.4E-41 1.8E-45 328.7 18.1 233 315-553 11-268 (294)
84 2owb_A Serine/threonine-protei 100.0 7.1E-41 2.4E-45 334.2 19.2 239 314-558 40-297 (335)
85 3g33_A Cell division protein k 100.0 5.8E-41 2E-45 331.0 18.2 239 314-558 8-302 (308)
86 3is5_A Calcium-dependent prote 100.0 5.2E-41 1.8E-45 327.4 17.5 239 315-559 22-285 (285)
87 2zmd_A Dual specificity protei 100.0 3.7E-41 1.3E-45 342.7 17.0 236 315-558 56-326 (390)
88 2r3i_A Cell division protein k 100.0 5.1E-41 1.8E-45 329.9 17.4 240 315-559 3-290 (299)
89 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-40 3.6E-45 323.9 19.2 235 314-558 8-267 (277)
90 3hko_A Calcium/calmodulin-depe 100.0 4.8E-41 1.7E-45 337.1 17.3 246 310-558 21-336 (345)
91 1nxk_A MAP kinase-activated pr 100.0 7.3E-41 2.5E-45 341.6 18.6 232 315-558 61-327 (400)
92 1t4h_A Serine/threonine-protei 100.0 1.8E-40 6E-45 324.6 20.5 237 315-560 26-290 (290)
93 1u5q_A Serine/threonine protei 100.0 5.1E-41 1.7E-45 336.3 17.1 234 315-558 54-311 (348)
94 2r5t_A Serine/threonine-protei 100.0 3.2E-41 1.1E-45 340.0 15.6 237 315-557 38-298 (373)
95 2yex_A Serine/threonine-protei 100.0 1.3E-40 4.5E-45 323.0 19.4 239 314-559 6-268 (276)
96 2nru_A Interleukin-1 receptor- 100.0 2.4E-40 8.4E-45 326.4 21.6 246 303-553 13-300 (307)
97 2eue_A Carbon catabolite derep 100.0 5.3E-41 1.8E-45 325.7 15.8 236 315-558 13-268 (275)
98 3kul_A Ephrin type-A receptor 100.0 8.5E-41 2.9E-45 332.0 17.6 233 315-553 49-307 (325)
99 3lm5_A Serine/threonine-protei 100.0 7.6E-41 2.6E-45 332.8 17.2 250 304-558 17-293 (327)
100 3rp9_A Mitogen-activated prote 100.0 6.5E-41 2.2E-45 349.1 17.4 237 315-558 53-402 (458)
101 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.1E-41 3.1E-45 322.8 17.1 232 314-553 7-258 (268)
102 1x8b_A WEE1HU, WEE1-like prote 100.0 1E-40 3.5E-45 325.9 17.7 239 314-559 10-286 (289)
103 2y7j_A Phosphorylase B kinase 100.0 3E-40 1E-44 333.3 21.5 244 307-557 86-364 (365)
104 3i6u_A CDS1, serine/threonine- 100.0 1.6E-40 5.6E-45 341.3 19.7 239 312-558 132-405 (419)
105 3ork_A Serine/threonine protei 100.0 1.8E-41 6.3E-46 335.0 12.1 237 315-557 12-278 (311)
106 3mwu_A Calmodulin-domain prote 100.0 1.2E-40 4E-45 349.6 18.9 237 314-558 21-282 (486)
107 3lb7_A RAF proto-oncogene seri 100.0 1.9E-40 6.5E-45 326.8 18.9 233 315-555 36-296 (307)
108 3mi9_A Cell division protein k 100.0 1E-40 3.5E-45 335.5 17.0 238 315-558 17-317 (351)
109 1ua2_A CAK, cell division prot 100.0 1E-40 3.5E-45 334.6 17.0 240 313-558 8-297 (346)
110 2vgo_A Serine/threonine-protei 100.0 2E-40 7E-45 323.1 18.4 236 315-558 14-268 (284)
111 3cbl_A C-FES, proto-oncogene t 100.0 3.7E-41 1.3E-45 341.6 13.4 234 314-553 113-368 (377)
112 1cm8_A Phosphorylated MAP kina 100.0 1.4E-40 4.7E-45 335.9 17.4 234 314-558 24-313 (367)
113 4hcu_A Tyrosine-protein kinase 100.0 6.9E-41 2.4E-45 323.8 14.6 231 315-553 10-260 (269)
114 3bhy_A Death-associated protei 100.0 2.5E-40 8.6E-45 322.3 18.4 237 315-558 5-271 (283)
115 2ac3_A MAP kinase-interacting 100.0 1.8E-40 6.2E-45 328.7 17.6 236 315-558 12-301 (316)
116 3soc_A Activin receptor type-2 100.0 1.1E-40 3.6E-45 331.1 15.9 232 314-553 23-312 (322)
117 2w5a_A Serine/threonine-protei 100.0 5.1E-41 1.8E-45 326.5 13.3 243 314-559 5-274 (279)
118 3a7i_A MST3 kinase, serine/thr 100.0 2.7E-40 9.1E-45 325.5 18.4 236 315-558 22-276 (303)
119 3pfq_A PKC-B, PKC-beta, protei 100.0 2.3E-40 7.9E-45 358.5 19.6 239 313-557 339-602 (674)
120 3lij_A Calcium/calmodulin depe 100.0 2E-40 7E-45 348.3 18.6 236 314-557 36-296 (494)
121 2qol_A Ephrin receptor; recept 100.0 9.9E-41 3.4E-45 337.5 15.6 233 315-553 45-303 (373)
122 2clq_A Mitogen-activated prote 100.0 4E-40 1.4E-44 322.9 19.2 239 316-559 23-285 (295)
123 3qup_A Tyrosine-protein kinase 100.0 1.5E-40 5E-45 330.5 16.3 243 313-558 21-304 (323)
124 3n9x_A Phosphotransferase; mal 100.0 3.3E-40 1.1E-44 340.5 19.5 238 314-558 25-367 (432)
125 3com_A Serine/threonine-protei 100.0 2.9E-40 9.9E-45 327.0 18.3 238 313-559 27-285 (314)
126 2h6d_A 5'-AMP-activated protei 100.0 2.9E-40 1E-44 320.6 17.7 237 315-558 11-267 (276)
127 3eqc_A Dual specificity mitoge 100.0 1.1E-40 3.6E-45 336.6 15.1 235 315-558 33-330 (360)
128 3byv_A Rhoptry kinase; malaria 100.0 2.6E-41 8.8E-46 343.0 10.1 236 314-557 72-364 (377)
129 2xrw_A Mitogen-activated prote 100.0 2E-40 6.8E-45 335.6 16.5 233 315-557 25-323 (371)
130 3nyv_A Calmodulin-domain prote 100.0 1.2E-40 4.2E-45 349.5 15.4 237 314-558 25-287 (484)
131 3vhe_A Vascular endothelial gr 100.0 9E-41 3.1E-45 337.1 13.5 243 307-553 14-349 (359)
132 2izr_A Casein kinase I isoform 100.0 3E-40 1E-44 329.1 17.1 228 315-552 9-274 (330)
133 3q4u_A Activin receptor type-1 100.0 4E-40 1.4E-44 323.9 17.7 227 314-553 7-296 (301)
134 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.6E-40 1.6E-44 332.5 18.6 232 314-553 64-332 (365)
135 3pg1_A Mitogen-activated prote 100.0 2.5E-40 8.6E-45 334.2 16.6 245 307-558 14-322 (362)
136 3q5i_A Protein kinase; CDPK, m 100.0 6.9E-40 2.4E-44 345.2 20.5 237 314-558 35-307 (504)
137 3nsz_A CK II alpha, casein kin 100.0 7.4E-40 2.5E-44 326.4 19.3 229 315-558 36-325 (330)
138 2jam_A Calcium/calmodulin-depe 100.0 5.2E-40 1.8E-44 323.6 17.5 235 314-558 8-267 (304)
139 3gen_A Tyrosine-protein kinase 100.0 2.3E-40 7.9E-45 322.6 14.9 232 314-553 23-274 (283)
140 1rjb_A FL cytokine receptor; k 100.0 1.9E-40 6.5E-45 332.6 14.5 237 313-553 43-328 (344)
141 3q60_A ROP5B; pseudokinase, tr 100.0 1.6E-40 5.5E-45 336.5 13.8 235 315-558 62-358 (371)
142 3kvw_A DYRK2, dual specificity 100.0 9.3E-40 3.2E-44 336.5 19.4 233 315-558 97-414 (429)
143 3tt0_A Basic fibroblast growth 100.0 6.5E-40 2.2E-44 333.2 17.8 236 314-553 68-346 (382)
144 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-40 4.9E-45 334.4 12.8 238 315-558 54-327 (355)
145 3l9p_A Anaplastic lymphoma kin 100.0 1.9E-40 6.6E-45 334.9 13.6 237 315-555 71-341 (367)
146 2j7t_A Serine/threonine-protei 100.0 2.5E-40 8.5E-45 325.5 13.9 239 314-559 18-282 (302)
147 3dtc_A Mitogen-activated prote 100.0 6.1E-40 2.1E-44 317.5 16.2 232 315-553 7-267 (271)
148 3poz_A Epidermal growth factor 100.0 5.1E-40 1.8E-44 326.9 15.8 232 315-553 15-272 (327)
149 1luf_A Muscle-specific tyrosin 100.0 4.8E-40 1.6E-44 329.6 15.6 237 313-553 45-329 (343)
150 1k9a_A Carboxyl-terminal SRC k 100.0 9.6E-40 3.3E-44 338.8 18.4 228 314-553 192-439 (450)
151 3ugc_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 323.2 14.3 232 315-553 10-285 (295)
152 2fst_X Mitogen-activated prote 100.0 3.6E-40 1.2E-44 332.5 14.6 233 314-557 28-316 (367)
153 2pml_X PFPK7, Ser/Thr protein 100.0 5.2E-40 1.8E-44 330.1 15.6 237 315-558 31-328 (348)
154 1phk_A Phosphorylase kinase; g 100.0 2.2E-39 7.6E-44 318.1 19.5 238 314-558 16-289 (298)
155 3qyz_A Mitogen-activated prote 100.0 1.6E-39 5.6E-44 328.2 19.0 236 314-558 26-319 (364)
156 2ivs_A Proto-oncogene tyrosine 100.0 7E-40 2.4E-44 324.2 15.9 236 314-553 22-305 (314)
157 4exu_A Mitogen-activated prote 100.0 9.8E-40 3.3E-44 330.5 17.3 232 314-557 41-328 (371)
158 2x7f_A TRAF2 and NCK-interacti 100.0 2.8E-40 9.7E-45 328.8 13.1 241 311-558 20-292 (326)
159 1qcf_A Haematopoetic cell kina 100.0 3.4E-40 1.2E-44 342.7 14.1 233 313-553 186-438 (454)
160 3kmu_A ILK, integrin-linked ki 100.0 8.6E-40 2.9E-44 316.3 15.9 229 315-553 10-264 (271)
161 1csn_A Casein kinase-1; phosph 100.0 2.7E-39 9.4E-44 317.4 19.4 229 315-553 10-277 (298)
162 2ycf_A Serine/threonine-protei 100.0 1E-39 3.6E-44 324.1 16.5 237 314-558 9-280 (322)
163 4e7w_A Glycogen synthase kinas 100.0 5.7E-40 2E-44 334.6 14.9 233 315-557 40-326 (394)
164 3op5_A Serine/threonine-protei 100.0 7.5E-40 2.6E-44 330.7 15.2 234 314-553 34-323 (364)
165 2i1m_A Macrophage colony-stimu 100.0 3.2E-40 1.1E-44 329.5 12.2 238 312-553 43-320 (333)
166 4f0f_A Serine/threonine-protei 100.0 2.8E-39 9.7E-44 315.6 18.6 229 315-553 19-283 (287)
167 2eva_A TAK1 kinase - TAB1 chim 100.0 1.2E-39 4.1E-44 321.2 15.9 229 315-553 8-257 (307)
168 1blx_A Cyclin-dependent kinase 100.0 1.3E-39 4.5E-44 324.0 16.2 240 313-558 9-302 (326)
169 3kex_A Receptor tyrosine-prote 100.0 1.1E-39 3.7E-44 324.3 15.5 232 315-553 13-270 (325)
170 4eut_A Serine/threonine-protei 100.0 1.2E-39 4E-44 332.8 15.9 234 315-553 9-303 (396)
171 2vwi_A Serine/threonine-protei 100.0 5E-40 1.7E-44 323.5 12.7 241 314-558 14-293 (303)
172 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-39 4.7E-44 318.1 15.6 232 314-553 23-282 (289)
173 1opk_A P150, C-ABL, proto-onco 100.0 6.6E-40 2.2E-44 343.8 14.3 233 314-553 219-472 (495)
174 3rgf_A Cyclin-dependent kinase 100.0 5.9E-40 2E-44 336.3 13.6 236 315-558 20-339 (405)
175 2b9h_A MAP kinase FUS3, mitoge 100.0 1.9E-39 6.5E-44 326.6 16.9 236 314-558 10-311 (353)
176 1t46_A HOMO sapiens V-KIT hard 100.0 1.5E-39 5E-44 321.7 15.8 236 314-553 22-301 (313)
177 1mp8_A Focal adhesion kinase 1 100.0 1.4E-39 4.7E-44 316.7 15.3 233 314-553 14-270 (281)
178 2wei_A Calmodulin-domain prote 100.0 2.7E-39 9.3E-44 315.7 17.2 238 313-558 20-282 (287)
179 2pvf_A Fibroblast growth facto 100.0 2.5E-39 8.4E-44 323.1 17.3 236 314-553 34-312 (334)
180 3eb0_A Putative uncharacterize 100.0 2E-39 7E-44 329.8 16.9 235 312-557 4-326 (383)
181 3fme_A Dual specificity mitoge 100.0 1.3E-39 4.5E-44 318.4 14.9 241 314-558 6-272 (290)
182 3cek_A Dual specificity protei 100.0 1.6E-39 5.5E-44 321.4 15.6 239 313-559 26-299 (313)
183 2wqm_A Serine/threonine-protei 100.0 5.8E-39 2E-43 317.0 18.9 236 315-553 32-291 (310)
184 1p4o_A Insulin-like growth fac 100.0 5.5E-40 1.9E-44 326.2 11.4 241 309-553 19-293 (322)
185 3brb_A Proto-oncogene tyrosine 100.0 3.2E-39 1.1E-43 319.4 16.8 238 313-553 32-302 (313)
186 4e5w_A Tyrosine-protein kinase 100.0 1.9E-39 6.5E-44 319.2 15.2 233 315-553 21-296 (302)
187 3t9t_A Tyrosine-protein kinase 100.0 1.3E-39 4.5E-44 314.4 13.7 231 315-553 8-258 (267)
188 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.1E-39 3.7E-44 338.6 14.0 232 314-553 183-434 (452)
189 2wtk_C Serine/threonine-protei 100.0 7.4E-39 2.5E-43 315.5 19.4 240 314-558 4-269 (305)
190 3coi_A Mitogen-activated prote 100.0 3.1E-39 1E-43 325.0 16.8 231 315-557 24-310 (353)
191 2h34_A Serine/threonine-protei 100.0 6.8E-39 2.3E-43 316.2 19.0 233 314-552 33-289 (309)
192 1xbb_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43 315.0 16.8 233 314-553 15-273 (291)
193 3c1x_A Hepatocyte growth facto 100.0 1.6E-39 5.5E-44 328.3 14.1 232 316-553 90-349 (373)
194 3kfa_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44 318.7 12.4 234 313-553 11-265 (288)
195 1z57_A Dual specificity protei 100.0 5.6E-39 1.9E-43 321.2 17.8 233 315-558 14-334 (339)
196 3e3p_A Protein kinase, putativ 100.0 2.3E-39 8E-44 326.9 15.1 243 308-558 16-320 (360)
197 3lxp_A Non-receptor tyrosine-p 100.0 7E-39 2.4E-43 317.5 18.1 229 317-553 33-304 (318)
198 4fvq_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 315.0 16.0 228 315-553 8-269 (289)
199 1j1b_A Glycogen synthase kinas 100.0 2.3E-39 8E-44 332.8 15.1 232 315-557 54-341 (420)
200 1u59_A Tyrosine-protein kinase 100.0 6.5E-39 2.2E-43 313.0 17.3 232 315-553 9-266 (287)
201 3mdy_A Bone morphogenetic prot 100.0 2.1E-38 7.2E-43 316.8 21.3 234 310-553 32-325 (337)
202 3an0_A Dual specificity mitoge 100.0 2.7E-39 9.4E-44 323.7 14.8 240 314-558 50-316 (340)
203 3lxl_A Tyrosine-protein kinase 100.0 4E-39 1.4E-43 320.6 15.8 232 315-553 23-297 (327)
204 2i6l_A Mitogen-activated prote 100.0 4.8E-39 1.6E-43 319.0 15.8 234 315-558 11-311 (320)
205 1qpc_A LCK kinase; alpha beta 100.0 3.7E-39 1.3E-43 313.4 14.7 232 314-553 12-263 (279)
206 1zy4_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 312.8 19.1 234 314-558 5-289 (303)
207 2v62_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 323.6 14.4 232 315-553 37-322 (345)
208 1mqb_A Ephrin type-A receptor 100.0 8.9E-39 3E-43 318.7 17.2 233 315-553 44-303 (333)
209 4hgt_A Casein kinase I isoform 100.0 1.5E-38 5E-43 311.9 18.4 231 313-553 7-274 (296)
210 3lzb_A Epidermal growth factor 100.0 6.1E-39 2.1E-43 318.9 15.8 232 315-553 15-272 (327)
211 2xir_A Vascular endothelial gr 100.0 4.4E-39 1.5E-43 318.7 14.6 242 308-553 20-304 (316)
212 4fl3_A Tyrosine-protein kinase 100.0 6.4E-39 2.2E-43 344.9 16.8 226 321-553 375-625 (635)
213 1wak_A Serine/threonine-protei 100.0 9.9E-39 3.4E-43 326.7 17.3 234 314-557 36-396 (397)
214 2a19_B Interferon-induced, dou 100.0 1.1E-38 3.8E-43 310.8 16.3 232 313-555 9-270 (284)
215 3cc6_A Protein tyrosine kinase 100.0 9E-39 3.1E-43 311.0 15.6 233 314-553 11-267 (281)
216 3uzp_A CKI-delta, CKID, casein 100.0 2.8E-38 9.6E-43 309.9 19.1 230 314-553 8-274 (296)
217 3f66_A Hepatocyte growth facto 100.0 1.4E-38 4.7E-43 312.5 16.8 233 315-553 25-285 (298)
218 2ozo_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43 342.3 17.0 231 316-553 336-592 (613)
219 2jii_A Serine/threonine-protei 100.0 5.8E-39 2E-43 322.7 14.0 227 315-553 42-330 (352)
220 1fvr_A Tyrosine-protein kinase 100.0 1.2E-38 4.3E-43 317.0 16.2 234 315-553 25-294 (327)
221 3fhr_A MAP kinase-activated pr 100.0 1.1E-38 3.8E-43 318.3 15.5 233 314-558 27-293 (336)
222 3g2f_A Bone morphogenetic prot 100.0 8.2E-39 2.8E-43 319.7 14.4 229 315-553 13-312 (336)
223 2vx3_A Dual specificity tyrosi 100.0 2.6E-38 8.8E-43 321.5 18.1 200 314-522 53-261 (382)
224 3aln_A Dual specificity mitoge 100.0 1.6E-38 5.6E-43 316.2 16.0 238 315-557 22-290 (327)
225 2iwi_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 317.5 12.3 241 311-559 27-290 (312)
226 2yfx_A Tyrosine-protein kinase 100.0 9.8E-39 3.3E-43 317.8 13.9 238 314-555 29-300 (327)
227 2buj_A Serine/threonine-protei 100.0 2.4E-38 8.4E-43 313.6 16.7 235 314-553 28-300 (317)
228 2h8h_A Proto-oncogene tyrosine 100.0 3.9E-39 1.3E-43 340.9 11.7 233 313-553 265-517 (535)
229 3gxj_A TGF-beta receptor type- 100.0 4.4E-40 1.5E-44 323.9 4.1 226 315-553 3-291 (303)
230 3pls_A Macrophage-stimulating 100.0 2.9E-38 9.8E-43 310.2 16.9 232 316-553 22-281 (298)
231 2dyl_A Dual specificity mitoge 100.0 2.4E-38 8.4E-43 313.7 16.4 236 315-557 25-288 (318)
232 1b6c_B TGF-B superfamily recep 100.0 6E-38 2E-42 314.2 19.3 235 306-553 33-330 (342)
233 3a99_A Proto-oncogene serine/t 100.0 5.1E-39 1.7E-43 318.7 11.3 238 313-558 41-299 (320)
234 3ll6_A Cyclin G-associated kin 100.0 3.2E-38 1.1E-42 315.5 16.8 234 315-554 28-303 (337)
235 1byg_A CSK, protein (C-termina 100.0 1.5E-38 5E-43 309.0 13.2 228 314-553 20-267 (278)
236 2eu9_A Dual specificity protei 100.0 5.4E-38 1.8E-42 316.2 17.6 234 314-558 18-339 (355)
237 2w1i_A JAK2; chromosomal rearr 100.0 2.8E-38 9.5E-43 314.4 14.7 232 315-553 41-316 (326)
238 2rio_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 327.2 14.1 233 316-557 16-300 (434)
239 1q8y_A SR protein kinase; tran 100.0 3E-38 1E-42 320.4 14.9 234 315-558 19-339 (373)
240 1u46_A ACK-1, activated CDC42 100.0 3.3E-38 1.1E-42 308.6 13.6 233 315-553 18-278 (291)
241 3p23_A Serine/threonine-protei 100.0 2.9E-38 9.9E-43 325.1 13.5 233 315-558 24-289 (432)
242 3sv0_A Casein kinase I-like; t 100.0 2.3E-37 8E-42 321.4 19.0 228 315-552 7-271 (483)
243 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.9E-38 1E-42 313.3 11.5 233 313-553 31-296 (319)
244 3qa8_A MGC80376 protein; kinas 100.0 2.9E-38 9.8E-43 335.0 10.6 238 315-557 14-302 (676)
245 2j0j_A Focal adhesion kinase 1 100.0 2.9E-37 9.9E-42 333.3 16.2 235 312-553 387-645 (656)
246 3m2w_A MAP kinase-activated pr 100.0 3.1E-36 1.1E-40 295.8 18.2 212 315-559 17-263 (299)
247 2vuw_A Serine/threonine-protei 100.0 8E-38 2.7E-42 312.4 3.9 225 314-557 19-336 (336)
248 2pzi_A Probable serine/threoni 100.0 1.8E-36 6E-41 330.4 14.3 227 315-556 80-324 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 2.2E-36 7.4E-41 310.0 11.1 235 315-557 78-368 (413)
250 3uqc_A Probable conserved tran 100.0 2.5E-35 8.4E-40 286.8 17.5 175 315-524 31-207 (286)
251 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-33 4.1E-38 278.8 13.9 229 5-235 50-285 (313)
252 1ogq_A PGIP-2, polygalacturona 100.0 9E-33 3.1E-37 272.5 13.9 230 1-232 72-305 (313)
253 3rgz_A Protein brassinosteroid 100.0 2.1E-32 7.3E-37 302.5 17.2 234 3-236 416-722 (768)
254 1ozn_A Reticulon 4 receptor; N 100.0 4.3E-31 1.5E-35 257.2 18.2 231 5-235 32-265 (285)
255 3rgz_A Protein brassinosteroid 100.0 2.6E-31 9E-36 293.8 18.8 231 1-231 438-740 (768)
256 3v47_A TOLL-like receptor 5B a 100.0 6.5E-31 2.2E-35 273.7 19.7 235 1-235 50-388 (455)
257 3zyi_A Leucine-rich repeat-con 100.0 1.5E-30 5.2E-35 270.4 21.6 227 5-233 75-305 (452)
258 3zyj_A Leucine-rich repeat-con 100.0 2.7E-30 9.2E-35 267.5 21.1 227 5-233 64-294 (440)
259 3v47_A TOLL-like receptor 5B a 100.0 6.8E-30 2.3E-34 266.0 21.6 137 6-142 31-171 (455)
260 2z66_A Variable lymphocyte rec 100.0 2.6E-30 9E-35 254.4 17.5 228 5-233 28-263 (306)
261 3oja_A Leucine-rich immune mol 100.0 1.1E-32 3.7E-37 288.2 -0.1 217 3-232 32-251 (487)
262 4fcg_A Uncharacterized protein 100.0 3.9E-30 1.3E-34 255.2 17.1 224 4-232 80-315 (328)
263 4azs_A Methyltransferase WBDD; 100.0 1.2E-31 4.1E-36 284.1 5.7 186 323-518 242-437 (569)
264 1ozn_A Reticulon 4 receptor; N 100.0 2.5E-29 8.5E-34 244.7 21.4 224 7-233 13-240 (285)
265 2id5_A Lingo-1, leucine rich r 100.0 1.2E-29 4.2E-34 265.6 19.9 235 2-236 53-314 (477)
266 2z66_A Variable lymphocyte rec 100.0 4.5E-30 1.5E-34 252.7 15.0 239 1-240 48-296 (306)
267 2id5_A Lingo-1, leucine rich r 100.0 1E-29 3.5E-34 266.3 18.2 233 1-233 76-335 (477)
268 3o6n_A APL1; leucine-rich repe 100.0 7.3E-30 2.5E-34 260.2 15.8 228 3-233 67-333 (390)
269 1xku_A Decorin; proteoglycan, 100.0 1.1E-28 3.8E-33 245.4 22.5 224 5-235 52-280 (330)
270 2z80_A TOLL-like receptor 2, v 100.0 6E-30 2E-34 257.1 12.5 229 5-233 52-316 (353)
271 3oja_B Anopheles plasmodium-re 100.0 1.3E-29 4.6E-34 272.3 15.7 228 3-233 73-339 (597)
272 3zyj_A Leucine-rich repeat-con 100.0 1.1E-28 3.9E-33 255.3 19.8 213 1-215 84-297 (440)
273 3zyi_A Leucine-rich repeat-con 100.0 1.5E-28 5E-33 255.4 20.3 213 1-215 95-308 (452)
274 1xku_A Decorin; proteoglycan, 100.0 2.6E-28 9E-33 242.7 20.7 225 1-232 72-307 (330)
275 2ft3_A Biglycan; proteoglycan, 100.0 2.9E-28 1E-32 242.6 20.9 224 5-236 54-282 (332)
276 2o6q_A Variable lymphocyte rec 100.0 7.4E-28 2.5E-32 232.2 23.0 206 6-214 17-222 (270)
277 2z62_A TOLL-like receptor 4, v 100.0 1.5E-28 5.2E-33 238.0 17.8 222 8-233 10-239 (276)
278 3t6q_A CD180 antigen; protein- 100.0 2.3E-28 7.8E-33 263.9 20.7 236 1-236 297-541 (606)
279 4fcg_A Uncharacterized protein 100.0 1E-28 3.5E-33 244.9 16.0 205 2-210 101-314 (328)
280 3o6n_A APL1; leucine-rich repe 100.0 2.9E-28 1E-32 248.3 19.1 229 4-234 44-311 (390)
281 3j0a_A TOLL-like receptor 5; m 100.0 3.9E-28 1.3E-32 271.2 21.7 228 5-234 266-563 (844)
282 3t6q_A CD180 antigen; protein- 100.0 7E-28 2.4E-32 260.1 22.0 241 1-242 274-524 (606)
283 2z62_A TOLL-like receptor 4, v 100.0 1.8E-27 6.3E-32 230.4 22.0 209 5-214 28-241 (276)
284 1p9a_G Platelet glycoprotein I 100.0 1.4E-27 4.8E-32 232.3 21.2 205 2-213 7-211 (290)
285 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-27 4.5E-32 261.4 21.8 231 5-235 381-626 (680)
286 2ft3_A Biglycan; proteoglycan, 100.0 1.6E-27 5.5E-32 237.2 20.4 223 1-231 74-307 (332)
287 3oja_B Anopheles plasmodium-re 100.0 8.4E-28 2.9E-32 258.3 19.4 229 4-234 50-317 (597)
288 4eco_A Uncharacterized protein 100.0 5.8E-29 2E-33 268.9 8.7 207 21-231 198-446 (636)
289 4eco_A Uncharacterized protein 100.0 2.2E-28 7.6E-33 264.3 13.3 229 1-233 202-472 (636)
290 2z80_A TOLL-like receptor 2, v 100.0 1.6E-28 5.6E-33 246.6 11.4 214 1-214 72-318 (353)
291 4g8a_A TOLL-like receptor 4; l 100.0 2.7E-27 9.1E-32 256.9 21.3 132 6-137 53-185 (635)
292 3rfs_A Internalin B, repeat mo 99.9 3.2E-27 1.1E-31 228.0 17.5 207 4-221 40-246 (272)
293 3vq2_A TLR4, TOLL-like recepto 99.9 2.5E-27 8.7E-32 255.7 18.5 209 24-233 345-560 (606)
294 3rfs_A Internalin B, repeat mo 99.9 4.6E-28 1.6E-32 233.9 11.0 227 6-242 20-246 (272)
295 2z7x_B TOLL-like receptor 1, v 99.9 4E-27 1.4E-31 249.3 19.2 88 146-233 321-414 (520)
296 1ziw_A TOLL-like receptor 3; i 99.9 1.7E-26 5.8E-31 252.7 23.4 231 2-232 326-574 (680)
297 1wwl_A Monocyte differentiatio 99.9 7.1E-28 2.4E-32 237.4 11.3 221 7-232 65-310 (312)
298 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 8.1E-27 2.8E-31 249.2 20.2 104 6-112 53-157 (562)
299 3o53_A Protein LRIM1, AGAP0063 99.9 6E-28 2.1E-32 238.5 10.0 217 3-232 32-251 (317)
300 3en9_A Glycoprotease, O-sialog 99.9 3.7E-28 1.3E-32 256.0 7.9 186 318-520 339-539 (540)
301 4ecn_A Leucine-rich repeat pro 99.9 7E-28 2.4E-32 265.2 10.3 227 5-236 323-662 (876)
302 1wwl_A Monocyte differentiatio 99.9 2E-28 6.7E-33 241.5 5.2 223 5-233 43-289 (312)
303 2o6q_A Variable lymphocyte rec 99.9 4.8E-26 1.6E-30 219.5 21.6 202 29-233 16-220 (270)
304 2z7x_B TOLL-like receptor 1, v 99.9 5.2E-27 1.8E-31 248.5 16.2 225 5-235 21-391 (520)
305 3vq2_A TLR4, TOLL-like recepto 99.9 6.8E-27 2.3E-31 252.3 17.4 213 1-215 346-563 (606)
306 3j0a_A TOLL-like receptor 5; m 99.9 1.1E-26 3.9E-31 259.4 19.3 232 1-232 44-376 (844)
307 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 1.2E-26 4.3E-31 247.7 18.0 107 1-113 72-181 (562)
308 4ecn_A Leucine-rich repeat pro 99.9 6.6E-27 2.2E-31 257.5 15.0 228 1-233 444-712 (876)
309 1p9a_G Platelet glycoprotein I 99.9 4.7E-26 1.6E-30 221.5 19.2 203 25-233 6-210 (290)
310 2z81_A CD282 antigen, TOLL-lik 99.9 3.3E-26 1.1E-30 244.0 17.3 231 2-233 47-425 (549)
311 2xwt_C Thyrotropin receptor; s 99.9 3.9E-26 1.3E-30 216.0 15.4 205 17-228 23-236 (239)
312 2xwt_C Thyrotropin receptor; s 99.9 3.4E-26 1.2E-30 216.4 13.8 198 5-208 31-237 (239)
313 2z63_A TOLL-like receptor 4, v 99.9 2.8E-26 9.5E-31 245.7 14.8 229 3-235 280-535 (570)
314 4fmz_A Internalin; leucine ric 99.9 8.6E-26 2.9E-30 226.3 17.3 220 1-235 106-328 (347)
315 3m19_A Variable lymphocyte rec 99.9 2.6E-25 9E-30 211.9 18.6 177 7-186 16-192 (251)
316 2z81_A CD282 antigen, TOLL-lik 99.9 3.2E-26 1.1E-30 244.1 13.3 183 5-187 26-210 (549)
317 2z63_A TOLL-like receptor 4, v 99.9 1.1E-25 3.7E-30 241.1 17.2 165 5-169 28-197 (570)
318 3m19_A Variable lymphocyte rec 99.9 5.3E-25 1.8E-29 209.8 19.8 182 29-213 14-195 (251)
319 3oja_A Leucine-rich immune mol 99.9 2.4E-26 8.1E-31 240.2 10.8 205 1-219 54-260 (487)
320 3o53_A Protein LRIM1, AGAP0063 99.9 2.2E-26 7.5E-31 227.3 9.9 212 1-226 54-270 (317)
321 1o6v_A Internalin A; bacterial 99.9 4.1E-25 1.4E-29 230.4 18.0 217 1-233 173-390 (466)
322 3bz5_A Internalin-J, INLJ; leu 99.9 9.1E-25 3.1E-29 226.2 20.4 211 2-234 39-249 (457)
323 4fmz_A Internalin; leucine ric 99.9 5.4E-25 1.8E-29 220.4 17.9 226 1-241 84-310 (347)
324 4glp_A Monocyte differentiatio 99.9 6.4E-26 2.2E-30 223.3 10.5 223 6-232 65-308 (310)
325 1h6u_A Internalin H; cell adhe 99.9 3.1E-25 1E-29 217.9 15.3 196 3-214 39-234 (308)
326 1o6v_A Internalin A; bacterial 99.9 1.3E-24 4.6E-29 226.4 19.0 218 2-233 65-302 (466)
327 3bz5_A Internalin-J, INLJ; leu 99.9 3.4E-24 1.1E-28 221.9 21.3 207 1-230 60-266 (457)
328 4glp_A Monocyte differentiatio 99.9 1.5E-25 5E-30 220.7 10.3 201 5-211 91-308 (310)
329 1h6u_A Internalin H; cell adhe 99.9 3.5E-24 1.2E-28 210.4 13.5 208 10-233 24-232 (308)
330 1zar_A RIO2 kinase; serine kin 99.9 3E-24 1E-28 207.4 12.4 155 308-493 83-253 (282)
331 2o6s_A Variable lymphocyte rec 99.9 2.4E-23 8.3E-28 192.3 17.9 180 8-197 10-189 (208)
332 2ca6_A RAN GTPase-activating p 99.9 2E-26 6.7E-31 234.4 -3.9 231 3-233 30-318 (386)
333 2ast_B S-phase kinase-associat 99.9 2.9E-25 9.8E-30 221.4 4.2 233 5-239 70-314 (336)
334 2o6s_A Variable lymphocyte rec 99.9 9.8E-23 3.4E-27 188.2 15.8 182 31-222 9-190 (208)
335 4g8a_A TOLL-like receptor 4; l 99.9 1.1E-22 3.6E-27 220.7 18.7 227 4-233 348-582 (635)
336 4ay9_X Follicle-stimulating ho 99.9 1.4E-22 4.8E-27 202.9 17.8 218 8-229 12-234 (350)
337 4ay9_X Follicle-stimulating ho 99.9 8.6E-23 2.9E-27 204.4 15.5 219 5-227 30-255 (350)
338 3goz_A Leucine-rich repeat-con 99.9 3.6E-25 1.2E-29 222.9 -2.0 230 4-233 21-299 (362)
339 3cvr_A Invasion plasmid antige 99.9 1.7E-22 5.9E-27 212.7 17.0 187 6-220 60-253 (571)
340 2xot_A Amphoterin-induced prot 99.9 2E-22 7E-27 202.5 16.6 176 8-186 21-202 (361)
341 1jl5_A Outer protein YOPM; leu 99.9 2.2E-21 7.4E-26 200.6 22.6 140 5-162 131-270 (454)
342 2ca6_A RAN GTPase-activating p 99.9 1.2E-24 4E-29 221.2 -2.4 214 1-214 56-320 (386)
343 1jl5_A Outer protein YOPM; leu 99.9 1.9E-21 6.6E-26 201.0 21.3 181 5-211 111-291 (454)
344 3g06_A SSPH2 (leucine-rich rep 99.9 1.3E-21 4.4E-26 208.6 20.3 204 6-240 62-282 (622)
345 1h6t_A Internalin B; cell adhe 99.9 6.2E-23 2.1E-27 199.7 9.1 191 9-215 28-218 (291)
346 2v9t_B SLIT homolog 2 protein 99.9 3.6E-22 1.2E-26 185.9 13.8 152 8-162 14-165 (220)
347 1h6t_A Internalin B; cell adhe 99.9 3.1E-22 1.1E-26 194.7 13.8 173 3-189 44-216 (291)
348 2v9t_B SLIT homolog 2 protein 99.9 1.5E-21 5.1E-26 181.6 17.7 154 31-187 13-166 (220)
349 2xot_A Amphoterin-induced prot 99.9 2.2E-22 7.6E-27 202.2 12.9 181 31-214 20-206 (361)
350 3goz_A Leucine-rich repeat-con 99.9 4.1E-24 1.4E-28 215.1 -0.7 225 9-233 2-268 (362)
351 3g06_A SSPH2 (leucine-rich rep 99.9 3.7E-21 1.3E-25 205.1 21.4 201 6-235 41-258 (622)
352 2v70_A SLIT-2, SLIT homolog 2 99.9 2.1E-21 7.3E-26 180.6 16.6 153 8-163 14-167 (220)
353 1m9s_A Internalin B; cell inva 99.9 2.3E-22 8E-27 214.1 11.5 196 7-218 23-218 (605)
354 2v70_A SLIT-2, SLIT homolog 2 99.9 6.2E-22 2.1E-26 184.2 11.6 155 31-188 13-168 (220)
355 2ast_B S-phase kinase-associat 99.9 2.7E-23 9.1E-28 207.1 1.8 219 6-228 48-282 (336)
356 1m9s_A Internalin B; cell inva 99.9 1.6E-21 5.4E-26 207.7 15.2 184 3-200 41-224 (605)
357 3e6j_A Variable lymphocyte rec 99.9 1.1E-20 3.7E-25 177.0 17.5 151 8-162 22-172 (229)
358 3e6j_A Variable lymphocyte rec 99.8 1.4E-20 4.8E-25 176.2 16.8 152 31-186 21-172 (229)
359 1z7x_W Ribonuclease inhibitor; 99.8 1.2E-23 4.2E-28 219.1 -6.2 228 6-233 86-356 (461)
360 1z7x_W Ribonuclease inhibitor; 99.8 1.6E-23 5.5E-28 218.1 -6.6 232 1-232 109-384 (461)
361 1xeu_A Internalin C; cellular 99.8 2.1E-21 7.3E-26 185.8 8.4 165 7-186 21-185 (263)
362 3cvr_A Invasion plasmid antige 99.8 4.3E-20 1.5E-24 194.5 17.0 186 24-237 49-249 (571)
363 1xeu_A Internalin C; cellular 99.8 5.7E-21 2E-25 182.8 7.8 175 27-216 17-191 (263)
364 4ezg_A Putative uncharacterize 99.8 2.2E-20 7.5E-25 170.7 11.1 156 24-187 39-195 (197)
365 4ezg_A Putative uncharacterize 99.8 2.8E-20 9.6E-25 170.0 11.6 156 48-211 39-195 (197)
366 1dce_A Protein (RAB geranylger 99.8 1.2E-22 4E-27 215.2 -6.0 107 103-214 443-550 (567)
367 1zth_A RIO1 serine protein kin 99.8 4E-20 1.4E-24 176.4 10.0 139 317-470 49-220 (258)
368 1w8a_A SLIT protein; signaling 99.8 9.7E-20 3.3E-24 165.6 10.8 130 32-164 11-141 (192)
369 1dce_A Protein (RAB geranylger 99.8 1E-21 3.4E-26 208.0 -4.9 197 2-204 346-567 (567)
370 1w8a_A SLIT protein; signaling 99.8 7.4E-19 2.5E-23 159.7 12.3 173 56-233 11-185 (192)
371 4b8c_D Glucose-repressible alc 99.8 8.2E-20 2.8E-24 199.4 6.9 191 5-207 173-369 (727)
372 3sb4_A Hypothetical leucine ri 99.8 7E-19 2.4E-23 174.4 11.7 210 4-222 48-322 (329)
373 4b8c_D Glucose-repressible alc 99.8 6E-20 2E-24 200.5 2.9 167 7-183 193-369 (727)
374 2ell_A Acidic leucine-rich nuc 99.8 2.1E-18 7.2E-23 153.2 9.9 132 29-162 24-160 (168)
375 2ell_A Acidic leucine-rich nuc 99.7 5E-18 1.7E-22 150.8 11.6 132 53-186 24-160 (168)
376 2wfh_A SLIT homolog 2 protein 99.7 1.2E-17 4.2E-22 151.6 14.2 128 32-163 13-140 (193)
377 3sb4_A Hypothetical leucine ri 99.7 1.5E-18 5.1E-23 172.0 8.1 228 5-242 25-321 (329)
378 2wfh_A SLIT homolog 2 protein 99.7 1.7E-17 5.7E-22 150.7 13.3 130 80-213 13-142 (193)
379 2je0_A Acidic leucine-rich nuc 99.7 3.8E-18 1.3E-22 148.3 6.8 127 29-157 17-148 (149)
380 2o6r_A Variable lymphocyte rec 99.7 6.9E-17 2.4E-21 144.7 15.1 132 31-165 9-140 (177)
381 2je0_A Acidic leucine-rich nuc 99.7 1E-17 3.5E-22 145.5 8.2 127 53-181 17-148 (149)
382 2o6r_A Variable lymphocyte rec 99.7 8.8E-17 3E-21 144.0 14.4 129 56-187 10-138 (177)
383 4gyi_A RIO2 kinase; protein ki 99.7 7.6E-17 2.6E-21 159.4 11.6 142 315-470 95-266 (397)
384 3ogk_B Coronatine-insensitive 99.7 1.8E-18 6E-23 186.0 -3.1 229 3-233 268-528 (592)
385 1a9n_A U2A', U2A'; complex (nu 99.7 5.9E-17 2E-21 145.0 7.0 105 78-186 43-153 (176)
386 1a9n_A U2A', U2A'; complex (nu 99.7 1.1E-16 3.7E-21 143.2 8.6 133 25-162 15-153 (176)
387 4fdw_A Leucine rich hypothetic 99.7 1.7E-15 6E-20 153.2 17.9 222 6-237 136-364 (401)
388 4fdw_A Leucine rich hypothetic 99.7 2.1E-15 7.2E-20 152.6 17.4 205 5-218 157-366 (401)
389 1ds9_A Outer arm dynein; leuci 99.6 1.3E-18 4.3E-23 159.1 -8.4 152 28-186 17-185 (198)
390 1ds9_A Outer arm dynein; leuci 99.6 2.2E-18 7.6E-23 157.5 -8.3 137 49-190 14-157 (198)
391 3ogk_B Coronatine-insensitive 99.6 2.5E-17 8.4E-22 177.0 -2.1 221 4-226 163-411 (592)
392 3g39_A Variable lymphocyte rec 99.6 6.8E-15 2.3E-19 130.5 12.1 106 31-139 11-116 (170)
393 2r9u_A Variable lymphocyte rec 99.6 1.2E-14 4E-19 129.5 12.2 104 32-138 15-118 (174)
394 3g39_A Variable lymphocyte rec 99.6 8.7E-15 3E-19 129.8 11.3 104 80-186 12-115 (170)
395 2r9u_A Variable lymphocyte rec 99.5 2.4E-14 8.3E-19 127.4 11.9 106 55-163 14-119 (174)
396 2p1m_B Transport inhibitor res 99.5 1.5E-16 5E-21 171.0 -6.8 204 25-230 285-518 (594)
397 2p1m_B Transport inhibitor res 99.5 1.2E-16 4E-21 171.8 -7.8 220 3-224 287-534 (594)
398 3un9_A NLR family member X1; l 99.5 2.1E-16 7.3E-21 158.4 -8.3 184 28-211 71-284 (372)
399 3un9_A NLR family member X1; l 99.5 2.3E-16 8E-21 158.1 -8.2 166 52-217 71-259 (372)
400 2ifg_A High affinity nerve gro 99.4 6E-13 2.1E-17 132.6 10.7 103 81-186 12-116 (347)
401 2ifg_A High affinity nerve gro 99.4 7.7E-13 2.6E-17 131.9 11.2 102 34-138 13-116 (347)
402 3tm0_A Aminoglycoside 3'-phosp 99.3 1E-11 3.5E-16 118.4 12.7 146 312-468 11-213 (263)
403 4gt6_A Cell surface protein; l 99.2 1.5E-10 5.1E-15 117.3 16.3 106 119-228 259-367 (394)
404 1nd4_A Aminoglycoside 3'-phosp 99.2 3.4E-11 1.2E-15 114.6 9.7 137 316-468 21-214 (264)
405 2ra8_A Uncharacterized protein 99.2 4.1E-12 1.4E-16 126.2 0.6 152 74-229 169-341 (362)
406 4fs7_A Uncharacterized protein 99.1 1.9E-09 6.5E-14 109.1 17.7 196 1-207 158-353 (394)
407 4gt6_A Cell surface protein; l 99.1 3.1E-09 1.1E-13 107.6 18.0 220 2-227 60-343 (394)
408 2ra8_A Uncharacterized protein 99.1 2.7E-11 9.1E-16 120.3 2.2 181 22-208 132-341 (362)
409 3dxp_A Putative acyl-COA dehyd 99.1 3.9E-10 1.3E-14 112.7 10.4 142 320-468 43-248 (359)
410 4fs7_A Uncharacterized protein 99.1 1.5E-09 5.2E-14 109.9 14.6 152 1-159 67-218 (394)
411 3sg8_A APH(2'')-ID; antibiotic 99.0 1.3E-10 4.4E-15 113.4 4.8 186 320-520 25-288 (304)
412 4h09_A Hypothetical leucine ri 98.9 4.3E-08 1.5E-12 98.5 17.8 127 97-227 213-342 (379)
413 3r70_A Aminoglycoside phosphot 98.8 2E-08 6.8E-13 98.5 11.2 185 316-517 38-296 (320)
414 1io0_A Tropomodulin; LRR prote 98.7 9.1E-10 3.1E-14 98.6 -1.1 116 23-138 30-164 (185)
415 4h09_A Hypothetical leucine ri 98.7 2E-07 6.9E-12 93.6 15.5 190 2-197 155-356 (379)
416 1io0_A Tropomodulin; LRR prote 98.7 1.6E-09 5.4E-14 97.0 -0.9 121 43-163 26-165 (185)
417 3rw6_A Nuclear RNA export fact 98.6 5.1E-09 1.7E-13 98.5 -1.0 80 98-179 167-257 (267)
418 4gkh_A Aminoglycoside 3'-phosp 98.6 4.8E-07 1.6E-11 86.2 12.8 135 322-468 31-223 (272)
419 3rw6_A Nuclear RNA export fact 98.5 4.8E-09 1.6E-13 98.7 -1.8 105 49-155 137-257 (267)
420 3tdw_A Gentamicin resistance p 98.4 1.6E-06 5.4E-11 84.2 13.3 137 320-469 24-225 (306)
421 3d1u_A Putative fructosamine-3 98.4 1.9E-06 6.4E-11 82.7 11.3 142 319-468 19-216 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.3 4.2E-06 1.4E-10 83.1 12.3 144 318-469 44-244 (362)
423 3e4g_A ATP synthase subunit S, 98.2 3.7E-07 1.2E-11 79.6 1.4 34 150-183 115-149 (176)
424 3e4g_A ATP synthase subunit S, 98.2 4.7E-07 1.6E-11 78.9 2.1 86 125-210 61-153 (176)
425 3ats_A Putative uncharacterize 98.1 5.1E-06 1.7E-10 82.6 8.7 81 321-401 26-121 (357)
426 2q83_A YTAA protein; 2635576, 98.0 3.5E-05 1.2E-09 75.9 12.3 141 321-468 38-252 (346)
427 3jr1_A Putative fructosamine-3 97.9 9.1E-05 3.1E-09 71.5 11.6 138 320-464 41-232 (312)
428 1pgv_A TMD-1, tropomodulin TMD 97.8 2.1E-06 7.2E-11 76.2 -0.4 113 26-138 38-170 (197)
429 2olc_A MTR kinase, methylthior 97.8 4.2E-05 1.4E-09 77.1 9.1 77 320-398 35-120 (397)
430 1pgv_A TMD-1, tropomodulin TMD 97.7 3.9E-06 1.3E-10 74.5 -0.4 118 45-162 33-170 (197)
431 3f7w_A Putative fructosamine-3 97.6 0.00027 9.4E-09 67.6 10.7 79 316-400 16-97 (288)
432 2pyw_A Uncharacterized protein 97.4 0.00057 1.9E-08 69.3 10.4 78 437-516 231-313 (420)
433 3rfe_A Platelet glycoprotein I 97.4 0.00026 8.9E-09 58.6 6.3 55 9-65 12-67 (130)
434 3csv_A Aminoglycoside phosphot 97.4 0.00071 2.4E-08 66.2 10.2 141 322-469 25-218 (333)
435 2ppq_A HSK, HK, homoserine kin 97.4 0.0016 5.5E-08 63.2 12.7 159 305-468 7-217 (322)
436 3dxq_A Choline/ethanolamine ki 97.3 0.00087 3E-08 64.5 9.7 71 320-400 23-95 (301)
437 1zyl_A Hypothetical protein YI 97.2 0.0041 1.4E-07 60.5 14.1 142 321-468 32-223 (328)
438 3rfe_A Platelet glycoprotein I 97.2 0.00057 1.9E-08 56.5 6.2 35 127-161 33-67 (130)
439 1nw1_A Choline kinase (49.2 KD 97.1 0.00093 3.2E-08 67.7 7.9 71 321-399 79-158 (429)
440 3feg_A Choline/ethanolamine ki 97.0 0.0014 4.8E-08 65.0 8.1 141 321-468 56-254 (379)
441 3i1a_A Spectinomycin phosphotr 96.8 0.0036 1.2E-07 61.3 9.1 32 438-469 206-237 (339)
442 2qg7_A Ethanolamine kinase PV0 96.7 0.0069 2.3E-07 61.7 10.2 74 320-400 113-188 (458)
443 3c5i_A Choline kinase; choline 96.5 0.0069 2.4E-07 60.0 9.3 72 321-399 39-120 (369)
444 2yle_A Protein spire homolog 1 96.4 0.011 3.7E-07 52.7 8.4 139 398-554 33-196 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.8 0.023 8E-07 56.4 8.3 144 321-468 58-280 (401)
446 3mes_A Choline kinase; malaria 94.4 0.14 5E-06 51.2 9.5 140 321-468 76-291 (424)
447 4ann_A ESSB; membrane protein, 93.6 0.16 5.6E-06 45.1 7.1 126 370-529 42-167 (215)
448 3g15_A CK, chetk-alpha, cholin 92.3 0.31 1E-05 48.6 8.0 30 439-468 245-280 (401)
449 2ks1_B Epidermal growth factor 90.3 0.32 1.1E-05 30.8 3.6 15 247-261 11-25 (44)
450 3cxl_A N-chimerin; SH2, RHO-GA 90.3 0.037 1.3E-06 56.4 -1.1 62 320-384 147-215 (463)
451 4ano_A ESSB; membrane protein, 89.9 1.1 3.8E-05 39.9 8.2 117 371-523 48-166 (219)
452 2ks1_B Epidermal growth factor 88.3 0.31 1.1E-05 30.8 2.5 32 247-278 8-39 (44)
453 2l2t_A Receptor tyrosine-prote 88.3 0.36 1.2E-05 30.5 2.7 6 249-254 12-17 (44)
454 2jwa_A Receptor tyrosine-prote 87.6 0.28 9.6E-06 30.9 1.9 6 272-277 34-39 (44)
455 2l2t_A Receptor tyrosine-prote 86.9 0.59 2E-05 29.5 3.1 21 249-269 9-29 (44)
456 2lz0_A Uncharacterized protein 78.6 5.8 0.0002 30.3 6.6 49 14-63 5-53 (100)
457 2lz0_A Uncharacterized protein 75.9 7.5 0.00026 29.7 6.5 43 90-133 9-51 (100)
458 2k9y_A Ephrin type-A receptor 71.8 3.5 0.00012 25.6 3.0 12 253-264 16-27 (41)
459 3ls8_A Phosphatidylinositol 3- 57.0 1.6E+02 0.0053 30.6 13.6 84 376-467 402-501 (614)
460 2x6h_A GH13170P, VPS34, phosph 53.8 1.3E+02 0.0043 31.8 12.6 45 416-467 529-575 (696)
461 1zza_A Stannin, AG8_1; helix, 53.1 14 0.00048 25.6 3.4 20 259-278 23-42 (90)
462 2klu_A T-cell surface glycopro 38.3 27 0.00091 23.9 2.9 15 253-267 13-27 (70)
463 3hhm_A Phosphatidylinositol-4, 36.8 2.6E+02 0.009 31.2 12.1 48 413-467 911-961 (1091)
464 1cja_A Protein (actin-fragmin 20.4 2.7E+02 0.0093 26.3 7.5 77 387-468 156-237 (342)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3e-54 Score=424.71 Aligned_cols=240 Identities=25% Similarity=0.351 Sum_probs=204.1
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|++.+.||+|+||.||+|+.+ +|+.||||++..........+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999864 68999999997655444556789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
||++|+|.+++...+. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 104 y~~gg~L~~~i~~~~~-~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp CCTTCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred CCCCCcHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 9999999999976432 3378999999999999999999999 99999999999999999999999999998765332
Q ss_pred CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc------------------ccccccccccc
Q 035761 474 SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------------SSSSLDKNIKL 535 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------------~~~~~~~~~~~ 535 (560)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||...+. .+.++.++++.
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~ 259 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQ 259 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHH
Confidence 333446799999999999999999999999999999999999999975432 12235566778
Q ss_pred ccccCCCCCCChhHHHhhceeee
Q 035761 536 IDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 536 ~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
|...||..||+++++++|+|+..
T Consensus 260 ~L~~dP~~R~s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 260 LFKRNPRDRPSVNSILEKGFIAK 282 (350)
T ss_dssp HTCSSGGGSCCHHHHHTSHHHHT
T ss_pred HccCChhHCcCHHHHhcCHHhhc
Confidence 88999999999999999999853
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-53 Score=418.86 Aligned_cols=236 Identities=26% Similarity=0.391 Sum_probs=208.8
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
+.|+..+.||+|+||.||+|+.+ +|+.||||++..... ...+.+.+|+++|+.++|||||++++++.+++..|+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 56888999999999999999875 689999999975432 233467899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
||++|+|.+++... .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 152 y~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 152 FLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp CCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 99999999999753 289999999999999999999999 99999999999999999999999999999876655
Q ss_pred CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------ccccccccc
Q 035761 474 SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSSSLDKNI 533 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~~~~~~~ 533 (560)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||...+. .+..+.+.+
T Consensus 225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli 304 (346)
T 4fih_A 225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 304 (346)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHH
T ss_pred CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHH
Confidence 556667899999999999999999999999999999999999999965431 122345566
Q ss_pred ccccccCCCCCCChhHHHhhceeeec
Q 035761 534 KLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
+.|...||..||+++++++|+|+..+
T Consensus 305 ~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 305 DRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp HHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHcCCChhHCcCHHHHhcCHhhcCC
Confidence 77889999999999999999999754
No 3
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.4e-53 Score=406.27 Aligned_cols=236 Identities=25% Similarity=0.363 Sum_probs=198.1
Q ss_pred cccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe----CCEEEEEE
Q 035761 318 DIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH----EKCMFLIY 392 (560)
Q Consensus 318 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 392 (560)
++.+.||+|+||.||+|.+. ++..||+|++..........+.|.+|++++++++|||||++++++.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999865 58899999997655444556789999999999999999999999875 34689999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC-CCcEEEeeeccccccCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS-EFEAFVADFGIARLLNY 471 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~ 471 (560)
|||++|+|.++++... .+++.++..++.||+.||+|||++ .++||||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~- 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR- 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC-
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC-
Confidence 9999999999998644 389999999999999999999998 123999999999999984 7999999999998643
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------------cccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------SSSLDK 531 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------~~~~~~ 531 (560)
.......+||+.|||||++.+ .|+.++|||||||++|||+||+.||...... ..++.+
T Consensus 184 -~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 261 (290)
T 3fpq_A 184 -ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE 261 (290)
T ss_dssp -TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHH
T ss_pred -CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHH
Confidence 234455689999999998875 5999999999999999999999999643321 112445
Q ss_pred ccccccccCCCCCCChhHHHhhceeeecC
Q 035761 532 NIKLIDLLDPRLPPPGDQMIRQGIILIST 560 (560)
Q Consensus 532 ~~~~~~~~dp~~~p~~~~~~~~~~~~~~~ 560 (560)
.+..|...||..||+++++++|+|+.--|
T Consensus 262 li~~~L~~dP~~R~s~~e~l~Hp~~~~~T 290 (290)
T 3fpq_A 262 IIEGCIRQNKDERYSIKDLLNHAFFQEET 290 (290)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTSGGGC---
T ss_pred HHHHHccCChhHCcCHHHHhcCccccCCC
Confidence 66778889999999999999999997654
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1e-52 Score=407.03 Aligned_cols=237 Identities=24% Similarity=0.347 Sum_probs=205.9
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|+.+ +|+.||||++.+.. ......+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999864 68999999997654 23345677899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++...+. +++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~~---l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 99999999999986443 99999999999999999999999 9999999999999999999999999999987543
Q ss_pred CC--CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccc
Q 035761 473 SS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNI 533 (560)
Q Consensus 473 ~~--~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~ 533 (560)
.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...+. .+.++...+
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli 265 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLV 265 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHH
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHH
Confidence 32 33456899999999999999999999999999999999999999975432 122345567
Q ss_pred ccccccCCCCCCChhHH------Hhhceee
Q 035761 534 KLIDLLDPRLPPPGDQM------IRQGIIL 557 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~------~~~~~~~ 557 (560)
+.|...||..||+++++ .+|+|+.
T Consensus 266 ~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~ 295 (311)
T 4aw0_A 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295 (311)
T ss_dssp HHHSCSSGGGSTTSGGGTCHHHHHTSGGGT
T ss_pred HHHccCCHhHCcChHHHcCCHHHHCCCCcC
Confidence 78889999999999985 6667764
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.2e-52 Score=420.89 Aligned_cols=236 Identities=26% Similarity=0.393 Sum_probs=209.6
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
+.|+..+.||+|+||.||+|+.+ +|+.||||++..... ...+.+.+|+.+|+.++|||||++++++.+++..|+|||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 56999999999999999999875 689999999975432 233468899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
||++|+|.++++..+ +++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 229 y~~gG~L~~~i~~~~----l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 229 FLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp CCTTEEHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCCCcHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 999999999997532 89999999999999999999999 99999999999999999999999999999886655
Q ss_pred CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------ccccccccc
Q 035761 474 SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSSSLDKNI 533 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~~~~~~~ 533 (560)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+..+..++
T Consensus 302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli 381 (423)
T 4fie_A 302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 381 (423)
T ss_dssp CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHH
T ss_pred ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHH
Confidence 566677899999999999999999999999999999999999999964431 122345667
Q ss_pred ccccccCCCCCCChhHHHhhceeeec
Q 035761 534 KLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
+.|...||..||+++++++|+|+..+
T Consensus 382 ~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 382 DRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp HHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 78889999999999999999999764
No 6
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-52 Score=405.83 Aligned_cols=232 Identities=25% Similarity=0.417 Sum_probs=191.5
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
.+++.+.+.||+|+||.||+|++++ .||||+++......+..+.|.+|++++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3568889999999999999999753 69999997655555667789999999999999999999998865 56899999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
||++|+|.++++.... .++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 112 y~~gGsL~~~l~~~~~--~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 112 WCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CCSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred cCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 9999999999976433 399999999999999999999999 99999999999999999999999999998764322
Q ss_pred C--CceeeccccCccCcccccc---CccCcchhHHHHHHHHHHHHhCCCCCCccccc-----------------------
Q 035761 474 S--NRTLLAGTYGSIAPELAYT---MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS----------------------- 525 (560)
Q Consensus 474 ~--~~~~~~g~~~~~aPE~~~~---~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~----------------------- 525 (560)
. .....+||+.|||||++.+ ..|+.++|||||||++|||+||+.||......
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 266 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTS
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccc
Confidence 2 2344679999999999864 35899999999999999999999999754321
Q ss_pred ccccccccccccccCCCCCCChhHHHhh
Q 035761 526 SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 526 ~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...+.+++..|...||..||++++++++
T Consensus 267 ~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 267 PKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp CHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred hHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 1123445566778899999999988654
No 7
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.7e-53 Score=409.50 Aligned_cols=238 Identities=24% Similarity=0.328 Sum_probs=199.1
Q ss_pred cCCcccceeeccCCeeEEEEEeC----CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (560)
++|++.+.||+|+||.||+|+.. +++.||||++++..........+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56999999999999999999752 47899999997654322333467889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+++|+|.+++...+. +++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+...
T Consensus 104 vmEy~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EECCCTTCEEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEcCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 9999999999999986543 99999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccc
Q 035761 471 YDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNI 533 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~ 533 (560)
.........+||+.|||||++.+..|+.++||||+||++|||+||+.||...+. .+.++...+
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 257 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLL 257 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 444445557899999999999999999999999999999999999999975432 223455677
Q ss_pred ccccccCCCCCCCh-----hHHHhhceeee
Q 035761 534 KLIDLLDPRLPPPG-----DQMIRQGIILI 558 (560)
Q Consensus 534 ~~~~~~dp~~~p~~-----~~~~~~~~~~~ 558 (560)
+.|...||..||++ +++++|+|+..
T Consensus 258 ~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~ 287 (304)
T 3ubd_A 258 RMLFKRNPANRLGAGPDGVEEIKRHSFFST 287 (304)
T ss_dssp HHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred HHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence 78888999999984 79999999853
No 8
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.9e-52 Score=406.94 Aligned_cols=235 Identities=23% Similarity=0.296 Sum_probs=195.8
Q ss_pred cCCcccceeeccCCeeEEEEEeC------CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
+++++.+.||+|+||.||+|.+. +++.||||+++.... ....+.|.+|+.++++++|||||+++|+|.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC-C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC-hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 34667889999999999999863 467899999975432 23456899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC
Q 035761 389 FLIYEYMEMGSLFCILRTDEE-------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE 455 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 455 (560)
++|||||++|+|.+++..... ...++|.++++|+.|||+||+|||+. +||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCC
Confidence 999999999999999965321 23599999999999999999999999 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCC--CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc-------
Q 035761 456 FEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------- 525 (560)
Q Consensus 456 ~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------- 525 (560)
+.+||+|||+|+....... ......||++|||||++.+..|+.++|||||||++|||+| |+.||......
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~ 261 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 261 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 9999999999987643322 2334579999999999999999999999999999999999 89999754421
Q ss_pred -----------ccccccccccccccCCCCCCChhHHHhh
Q 035761 526 -----------SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 526 -----------~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...+.+++..|...||..||++++++++
T Consensus 262 ~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 262 NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 1123455566677788888888888765
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.2e-52 Score=396.23 Aligned_cols=236 Identities=23% Similarity=0.364 Sum_probs=190.9
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|... +|+.||||++++.. ......+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999864 68999999997544 22334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+ +|+|.+++...+. +++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~~---l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHSCS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 6799999976543 99999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
......+||+.|||||++.+..+ +.++||||+||++|||++|+.||...+. .+..+.+.++
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 244 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIK 244 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 23344679999999999998876 5799999999999999999999975431 1223456667
Q ss_pred cccccCCCCCCChhHHHhhceeee
Q 035761 535 LIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.|...||..||+++++++|+|++.
T Consensus 245 ~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 245 RMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp HHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred HHccCChhHCcCHHHHHcCccccc
Confidence 888999999999999999999863
No 10
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7.5e-52 Score=407.91 Aligned_cols=234 Identities=25% Similarity=0.407 Sum_probs=191.5
Q ss_pred cCCcccceeeccCCeeEEEEEeC------CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
++|.+.+.||+|+||.||+|+++ +++.||||+++... ....+.|.+|+++|++++|||||+++|+|.+++..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45777889999999999999864 47889999997543 34456899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCc------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC
Q 035761 389 FLIYEYMEMGSLFCILRTDEE------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF 456 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 456 (560)
++|||||++|+|.++++.... ...++|.+++.|+.|||+||+|||+. +||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 999999999999999976432 23599999999999999999999998 999999999999999999
Q ss_pred cEEEeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc---------
Q 035761 457 EAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS--------- 524 (560)
Q Consensus 457 ~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~--------- 524 (560)
.+||+|||+|+........ .....||+.|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~ 275 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 275 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 9999999999876433222 234579999999999999999999999999999999999 9999975442
Q ss_pred ---------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 ---------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 ---------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+++..|...||..||++++++++
T Consensus 276 g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 276 GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 11234455666777888888888888764
No 11
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.8e-52 Score=405.35 Aligned_cols=233 Identities=26% Similarity=0.407 Sum_probs=194.4
Q ss_pred cCCcccceeeccCCeeEEEEEeC------CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
++|.+.+.||+|+||.||+|++. +++.||||+++... ....+.|.+|+++|++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 46788899999999999999864 47789999997643 33456899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCC----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcE
Q 035761 389 FLIYEYMEMGSLFCILRTDE----------EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEA 458 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 458 (560)
++|||||++|+|.++++..+ ....++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997643 234599999999999999999999999 99999999999999999999
Q ss_pred EEeeeccccccCCCCCCc--eeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc-----------
Q 035761 459 FVADFGIARLLNYDSSNR--TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS----------- 524 (560)
Q Consensus 459 kl~Dfg~~~~~~~~~~~~--~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~----------- 524 (560)
||+|||+|+......... ....||++|||||++.+..|+.++|||||||++|||+| |+.||.....
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~ 247 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR 247 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTC
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999998764332222 22468999999999999999999999999999999999 9999975542
Q ss_pred -------cccccccccccccccCCCCCCChhHHHh
Q 035761 525 -------SSSSLDKNIKLIDLLDPRLPPPGDQMIR 552 (560)
Q Consensus 525 -------~~~~~~~~~~~~~~~dp~~~p~~~~~~~ 552 (560)
....+.+++..|...||+.||+++++.+
T Consensus 248 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~ 282 (299)
T 4asz_A 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT 282 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 1123445556666778888888777743
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.3e-51 Score=399.34 Aligned_cols=225 Identities=25% Similarity=0.286 Sum_probs=190.3
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
+.|+..+.||+|+||.||+|+.+ +|+.||||+++.... ..+|+.+++.++|||||++++++.+++..++|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 45778889999999999999864 689999999975331 2469999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC-cEEEeeeccccccCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF-EAFVADFGIARLLNYD 472 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~ 472 (560)
||++|+|.++++..+. +++.++..++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+...
T Consensus 131 y~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 131 LLEGGSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred ccCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 9999999999986443 99999999999999999999999 999999999999999987 5999999999987543
Q ss_pred CCC-----ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------------cc
Q 035761 473 SSN-----RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------SS 527 (560)
Q Consensus 473 ~~~-----~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------~~ 527 (560)
... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ..
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~ 284 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAP 284 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCH
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCH
Confidence 222 12357999999999999999999999999999999999999999754321 11
Q ss_pred ccccccccccccCCCCCCChhHHHh
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIR 552 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~ 552 (560)
.+.+.++.|...||..||++.++++
T Consensus 285 ~~~~li~~~L~~dP~~R~sa~el~~ 309 (336)
T 4g3f_A 285 LTAQAIQEGLRKEPVHRASAMELRR 309 (336)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHH
Confidence 2344556677789999999998854
No 13
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.2e-50 Score=389.56 Aligned_cols=237 Identities=21% Similarity=0.326 Sum_probs=190.4
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC-------
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK------- 386 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 386 (560)
++|++.+.||+|+||.||+|+.+ +|+.||||+++.... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 45899999999999999999864 689999999875443 234467899999999999999999999987644
Q ss_pred -----EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEe
Q 035761 387 -----CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVA 461 (560)
Q Consensus 387 -----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 461 (560)
..++||||+++|+|.+++.........++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 3689999999999999998765544567788899999999999999999 99999999999999999999999
Q ss_pred eeccccccCCCCCC------------ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc----
Q 035761 462 DFGIARLLNYDSSN------------RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS---- 525 (560)
Q Consensus 462 Dfg~~~~~~~~~~~------------~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~---- 525 (560)
|||+|+.+...... ....+||+.|||||++.+..|+.++||||+||++|||++ ||......
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~ 237 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTL 237 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHH
Confidence 99999877543221 123579999999999999999999999999999999996 77533210
Q ss_pred ---------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ---------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ---------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.......++.|...||..||++.++++|+|+..
T Consensus 238 ~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 285 (299)
T 4g31_A 238 TDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED 285 (299)
T ss_dssp HHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred HHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence 011234567788899999999999999999864
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.7e-50 Score=399.99 Aligned_cols=242 Identities=24% Similarity=0.337 Sum_probs=200.6
Q ss_pred HHHHHHhcCCcccceeeccCCeeEEEEEeCC------CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCC-CCcceeee
Q 035761 308 QDMIEATEDFDIKYCIGTGGYGSVYRARLPS------GKVVALKKLHRLETELASLESFQNEARLLSQIRH-RNIVKLYG 380 (560)
Q Consensus 308 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~ 380 (560)
.+++...++|++.+.||+|+||.||+|.+.. ++.||||+++..... ...+.|.+|+++|++++| ||||+++|
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~-~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh-HHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 4455566889999999999999999998643 368999999765432 345679999999999965 99999999
Q ss_pred EEEeC-CEEEEEEeccCCCCHHHHhhcCCc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCC
Q 035761 381 FCLHE-KCMFLIYEYMEMGSLFCILRTDEE-------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDIS 446 (560)
Q Consensus 381 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 446 (560)
+|.++ +..++|||||++|+|.++++.... ...++|.+++.++.|||+||+|||++ +|||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccC
Confidence 99775 568999999999999999976432 23489999999999999999999999 99999999
Q ss_pred CCCeEeCCCCcEEEeeeccccccCCCCCCc--eeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 035761 447 SNNILLNSEFEAFVADFGIARLLNYDSSNR--TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLS 523 (560)
Q Consensus 447 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~ 523 (560)
|+|||+++++.+||+|||+|+.+....... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||....
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999999775443322 23568999999999999999999999999999999998 999997544
Q ss_pred cc-------------------ccccccccccccccCCCCCCChhHHHhh
Q 035761 524 SS-------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 524 ~~-------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.. ..++.+.+..|...||..||++.+++++
T Consensus 293 ~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 293 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 21 1123445566677788888888888876
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-49 Score=387.00 Aligned_cols=198 Identities=26% Similarity=0.369 Sum_probs=163.3
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC----EEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK----CMFL 390 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~l 390 (560)
++|.+.+.||+|+||.||+|++ +|+.||||+++..... ...+.+|+..+.+++|||||+++|+|.+++ ..+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~---~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH---HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh---hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 4577889999999999999998 5899999999754321 112334566667889999999999998754 5799
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEeCCCCCCeEeCCCCcEEEeeecc
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHH-----CTPPILHRDISSNNILLNSEFEAFVADFGI 465 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 465 (560)
|||||++|+|.++++... ++|.++.+++.|+|+||+|||++ ..++||||||||+|||++.++++||+|||+
T Consensus 79 V~Ey~~~gsL~~~l~~~~----l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EecCCCCCcHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 999999999999998643 89999999999999999999975 245899999999999999999999999999
Q ss_pred ccccCCCCCC----ceeeccccCccCccccccC------ccCcchhHHHHHHHHHHHHhCCCCCC
Q 035761 466 ARLLNYDSSN----RTLLAGTYGSIAPELAYTM------VVTEKYDVYSFGVVALEVLMGKHPGE 520 (560)
Q Consensus 466 ~~~~~~~~~~----~~~~~g~~~~~aPE~~~~~------~~~~~~Dv~s~G~il~el~~g~~P~~ 520 (560)
|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||+.||.
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~ 219 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence 9876543221 2235799999999998764 47789999999999999999987764
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-48 Score=391.93 Aligned_cols=236 Identities=23% Similarity=0.349 Sum_probs=199.8
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe------CCE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH------EKC 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 387 (560)
++|++.+.||+|+||.||+|+.+ +|+.||||+++.........+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999864 69999999997655444555678899999999999999999998764 357
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.|+|||||+ |+|.+++...+. +++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~---l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSC---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEeCCC-CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceee
Confidence 899999996 689999976543 99999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC----CCCceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCcccc------------------
Q 035761 468 LLNYD----SSNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLSS------------------ 524 (560)
Q Consensus 468 ~~~~~----~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------------ 524 (560)
.+... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||...+.
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence 76432 1223446899999999998875 568899999999999999999999964431
Q ss_pred ------------------------------cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 525 ------------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 525 ------------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
.+.+....++.|...||..||+++++++|+|+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~ 349 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLA 349 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGT
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhC
Confidence 011223456778899999999999999999986
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.7e-47 Score=382.57 Aligned_cols=233 Identities=24% Similarity=0.284 Sum_probs=194.9
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC----CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKC 387 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 387 (560)
..++|++.+.||+|+||.||+|+.+ .++.||||++..... ...+.+|+++++.+ +||||+++++++.+++.
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH----PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC----HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC----HHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 3568999999999999999999753 467899999865432 34577899999988 69999999999999999
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC-CcEEEeeeccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE-FEAFVADFGIA 466 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~ 466 (560)
.++||||+++|+|.+++.. +++.++..++.||+.||+|||++ |||||||||+|||++.+ +.+||+|||+|
T Consensus 95 ~~lvmE~~~g~~L~~~~~~------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILNS------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEEECCCCCCHHHHHTT------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEEeCCCcccHHHHHcC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 9999999999999999852 89999999999999999999999 99999999999999877 79999999999
Q ss_pred cccCCCCC----------------------------CceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCC
Q 035761 467 RLLNYDSS----------------------------NRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKH 517 (560)
Q Consensus 467 ~~~~~~~~----------------------------~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~ 517 (560)
+....... .....+||+.|||||++.+. .|+.++||||+||++|||++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 86532211 11234799999999998875 58899999999999999999999
Q ss_pred CCCccccc------------------------------------------------------------------------
Q 035761 518 PGELLSSS------------------------------------------------------------------------ 525 (560)
Q Consensus 518 P~~~~~~~------------------------------------------------------------------------ 525 (560)
||....+.
T Consensus 246 Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~i 325 (361)
T 4f9c_A 246 PFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEV 325 (361)
T ss_dssp SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTC
T ss_pred CCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccC
Confidence 99533211
Q ss_pred ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+.+..+.++.|...||+.|++++++++|+|+.+
T Consensus 326 s~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 326 PDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred CHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 111234556778899999999999999999864
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.2e-46 Score=392.45 Aligned_cols=235 Identities=21% Similarity=0.249 Sum_probs=197.5
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhh-hhhHHH---HHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETE-LASLES---FQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~---~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
++|++.+.||+|+||.||+|+.+ +|+.||||++.+.... ...... ...++.+++.++|||||++++++.+++..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999865 6899999999764421 122222 334467777889999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||++||+|.+++...+. +++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+
T Consensus 269 lVmEy~~GGdL~~~l~~~~~---l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999986543 99999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------cccc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSSS 528 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~~ 528 (560)
... .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||..... .+..
T Consensus 343 ~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~ 420 (689)
T 3v5w_A 343 SKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE 420 (689)
T ss_dssp SSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred CCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHH
Confidence 532 2334689999999999964 5799999999999999999999999964332 1223
Q ss_pred cccccccccccCCCCCCC-----hhHHHhhceee
Q 035761 529 LDKNIKLIDLLDPRLPPP-----GDQMIRQGIIL 557 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~-----~~~~~~~~~~~ 557 (560)
...+++.|...||..|+. ++++..|+|+.
T Consensus 421 a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~ 454 (689)
T 3v5w_A 421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454 (689)
T ss_dssp HHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGT
T ss_pred HHHHHHHHccCCHhHCCCCCCCCHHHHhcCcccc
Confidence 455666778889999987 68999999975
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-45 Score=391.46 Aligned_cols=236 Identities=25% Similarity=0.340 Sum_probs=204.5
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|++.+.||+|+||.||+|..+ +|+.||+|++..... ...+.+.+|+++|+.++|||||++++++.+++..++|||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~--~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE--SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch--hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 57999999999999999999864 689999999875432 234578899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC--CcEEEeeeccccccCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE--FEAFVADFGIARLLNY 471 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~~~~~~~ 471 (560)
||++|+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 235 ~~~gg~L~~~i~~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 235 FMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCCBHHHHHTCTTS--CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred ecCCCcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 9999999999965432 389999999999999999999999 99999999999999854 8899999999998753
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSSLD 530 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~~~ 530 (560)
. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||...+. .+....
T Consensus 310 ~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 388 (573)
T 3uto_A 310 K-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388 (573)
T ss_dssp T-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHH
T ss_pred C-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 3 334456899999999999999999999999999999999999999964432 112234
Q ss_pred cccccccccCCCCCCChhHHHhhceeee
Q 035761 531 KNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 531 ~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+++.|...||..||+++++++|+|+..
T Consensus 389 dli~~~L~~dp~~R~t~~e~l~Hpw~~~ 416 (573)
T 3uto_A 389 DFIRKLLLADPNTRMTIHQALEHPWLTP 416 (573)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred HHHHHHccCChhHCcCHHHHhcCcCcCC
Confidence 4556778889999999999999999863
No 20
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.8e-44 Score=355.82 Aligned_cols=238 Identities=26% Similarity=0.407 Sum_probs=207.8
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+++++.++||||+++++++..++..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35799999999999999999987 57999999999765544455667889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++...+. +++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp CCCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred ECCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 99999999999976443 89999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCceeeccccCccCccccccCccC-cchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVT-EKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~-~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
......+||+.|+|||++.+..++ .++||||+||++|||++|+.||...+. ....+...++
T Consensus 168 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 246 (328)
T 3fe3_A 168 -GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 246 (328)
T ss_dssp -CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred -CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 233445799999999999988875 789999999999999999999975432 1233456677
Q ss_pred cccccCCCCCCChhHHHhhceeee
Q 035761 535 LIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.|...||..||+++++++|+|+..
T Consensus 247 ~~L~~dP~~R~t~~eil~h~~~~~ 270 (328)
T 3fe3_A 247 RFLVLNPIKRGTLEQIMKDRWINA 270 (328)
T ss_dssp HHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred HHCCCChhHCcCHHHHhcCHhhcC
Confidence 888999999999999999999853
No 21
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.3e-43 Score=347.79 Aligned_cols=237 Identities=24% Similarity=0.372 Sum_probs=208.9
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 36799999999999999999985 5689999999875432 23457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++.... +++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 97 e~~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 97 EYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp ECCTTCBHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ECCCCCCHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999999997642 89999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------cccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSSSLDKN 532 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~~~~~~ 532 (560)
........||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ....+.+.
T Consensus 170 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 249 (297)
T 3fxz_A 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249 (297)
T ss_dssp TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHH
T ss_pred ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHH
Confidence 5555566799999999999999999999999999999999999999965432 12224566
Q ss_pred cccccccCCCCCCChhHHHhhceeeec
Q 035761 533 IKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 533 ~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
++.|...||..||+++++++|+|+..+
T Consensus 250 i~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 250 LNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp HHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHccCChhHCcCHHHHhhChhhccc
Confidence 778889999999999999999998754
No 22
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.8e-43 Score=346.99 Aligned_cols=248 Identities=26% Similarity=0.392 Sum_probs=213.0
Q ss_pred CCCcCHHHHHHHhcC----------CcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc
Q 035761 302 DGRITFQDMIEATED----------FDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQI 370 (560)
Q Consensus 302 ~~~~~~~~~~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l 370 (560)
.+.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDY 99 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhC
Confidence 356788888877754 666778999999999999876 69999999987543 23456788999999999
Q ss_pred CCCCcceeeeEEEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCe
Q 035761 371 RHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNI 450 (560)
Q Consensus 371 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Ni 450 (560)
+||||+++++++...+..++||||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 9999999999999999999999999999999998753 389999999999999999999999 999999999999
Q ss_pred EeCCCCcEEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc------
Q 035761 451 LLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS------ 524 (560)
Q Consensus 451 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------ 524 (560)
+++.++.+||+|||++..............||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~ 252 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR 252 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 99999999999999998776544444556799999999999999999999999999999999999999964331
Q ss_pred --------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 --------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 --------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.+..|...||..||+++++++|+|+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 300 (321)
T 2c30_A 253 LRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300 (321)
T ss_dssp HHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred HhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence 1122456667788899999999999999999864
No 23
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2e-43 Score=348.78 Aligned_cols=239 Identities=25% Similarity=0.356 Sum_probs=201.2
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
.++|++.+.||+|+||.||+|+..+|+.||+|++..........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 36799999999999999999999889999999997654444445678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++ ++.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 100 FMEK-DLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp CCSE-EHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred CCCC-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 9985 88888875432 389999999999999999999999 99999999999999999999999999998875444
Q ss_pred CCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccccc--------------------------
Q 035761 474 SNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS-------------------------- 526 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~-------------------------- 526 (560)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 44455678999999999876 568999999999999999999999996443211
Q ss_pred ---------------------cccccccccccccCCCCCCChhHHHhhceeee
Q 035761 527 ---------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 527 ---------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.++.+.++.|...||..||+++++++|+|+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 306 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence 11234667788899999999999999999864
No 24
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.1e-43 Score=348.65 Aligned_cols=237 Identities=23% Similarity=0.308 Sum_probs=206.8
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|+.+ +|+.||+|++++... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57899999999999999999875 689999999976432 2344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++...+ .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp ECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9999999999997643 389999999999999999999999 9999999999999999999999999999875444
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIKL 535 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~~ 535 (560)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||...+. ....+...++.
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 238 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 4445556799999999999999999999999999999999999999965432 12234566677
Q ss_pred ccccCCCCCC-----ChhHHHhhceee
Q 035761 536 IDLLDPRLPP-----PGDQMIRQGIIL 557 (560)
Q Consensus 536 ~~~~dp~~~p-----~~~~~~~~~~~~ 557 (560)
|...||..|| +++++++|+|+.
T Consensus 239 lL~~dP~~R~g~~~~~~~ei~~h~~f~ 265 (337)
T 1o6l_A 239 LLKKDPKQRLGGGPSDAKEVMEHRFFL 265 (337)
T ss_dssp HTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred HhhcCHHHhcCCCCCCHHHHHcCCCcC
Confidence 8889999998 899999999975
No 25
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=352.51 Aligned_cols=238 Identities=24% Similarity=0.373 Sum_probs=201.9
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchh-hhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLE-TELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 390 (560)
.++|++.+.||+|+||.||+|+.+ +++.||||+++... ......+.+.+|..+++.+ +||||+++++++.+++..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999875 58999999997643 2334556788999999988 79999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 102 v~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRR---FDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 9999999999999976443 89999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccc
Q 035761 471 YDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNI 533 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~ 533 (560)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||...+. ....+...+
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li 255 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGIL 255 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 444445556799999999999999999999999999999999999999975442 122345666
Q ss_pred ccccccCCCCCCCh------hHHHhhceee
Q 035761 534 KLIDLLDPRLPPPG------DQMIRQGIIL 557 (560)
Q Consensus 534 ~~~~~~dp~~~p~~------~~~~~~~~~~ 557 (560)
+.|...||..||++ +++++|+|+.
T Consensus 256 ~~lL~~dP~~R~~~~~~~~~~~il~hp~f~ 285 (353)
T 3txo_A 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFFK 285 (353)
T ss_dssp HHHTCSSGGGSTTSGGGTCTHHHHTSGGGT
T ss_pred HHHhhhCHHHccCCcccCCHHHHhhCCccc
Confidence 77888899999998 8999999975
No 26
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.2e-43 Score=359.07 Aligned_cols=240 Identities=21% Similarity=0.282 Sum_probs=207.7
Q ss_pred HhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
..++|++.+.||+|+||.||+|.. .+|+.+|+|++..........+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 356799999999999999999976 4689999999876554444566789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC---CCCcEEEeeeccccc
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN---SEFEAFVADFGIARL 468 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~ 468 (560)
|||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||++..
T Consensus 89 ~E~~~gg~L~~~i~~~~~---~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp ECCCBCCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 999999999999976543 89999999999999999999999 999999999999998 467899999999988
Q ss_pred cCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------ccc
Q 035761 469 LNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSS 527 (560)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~ 527 (560)
............||+.|+|||++.+..++.++||||+||++|||++|+.||...+. ...
T Consensus 163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 242 (444)
T 3soa_A 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 242 (444)
T ss_dssp CCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCH
T ss_pred ecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCH
Confidence 76554444556799999999999999999999999999999999999999954331 223
Q ss_pred ccccccccccccCCCCCCChhHHHhhceeee
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+.+.++.|...||..||++.++++|+|+..
T Consensus 243 ~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 243 EAKDLINKMLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred HHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence 4556778888999999999999999999853
No 27
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.7e-43 Score=343.25 Aligned_cols=238 Identities=26% Similarity=0.354 Sum_probs=198.8
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEec
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEY 394 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (560)
++|++.+.||+|+||.||+|+..+|+.||+|++..........+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46889999999999999999988899999999976544334446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 035761 395 MEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS 474 (560)
Q Consensus 395 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 474 (560)
+++ +|.+++..... .+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (288)
T ss_dssp CSE-EHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred cCC-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence 986 99998876432 389999999999999999999999 999999999999999999999999999987654333
Q ss_pred CceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCccccc----------------------------
Q 035761 475 NRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLSSS---------------------------- 525 (560)
Q Consensus 475 ~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~---------------------------- 525 (560)
......||+.|+|||++.+. .++.++||||+||++|||++|+.||......
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence 34445789999999998764 5899999999999999999999999653311
Q ss_pred ------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||+++++++|+|+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 011124566788889999999999999999864
No 28
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.6e-42 Score=348.20 Aligned_cols=238 Identities=24% Similarity=0.315 Sum_probs=205.9
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhh----hhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETEL----ASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
.+.|++.+.||+|+||.||+|..+ +|+.||+|.++...... ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457899999999999999999875 58999999997644221 1346788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC----cEEEeeec
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF----EAFVADFG 464 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 464 (560)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 99999999999999997643 389999999999999999999999 999999999999998877 79999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------- 524 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------- 524 (560)
++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 165 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 243 (361)
T 2yab_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243 (361)
T ss_dssp SCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHT
T ss_pred CceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhcc
Confidence 99876543 233445799999999999999999999999999999999999999964331
Q ss_pred -cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+...++.|...||..||+++++++|+|+..
T Consensus 244 ~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 278 (361)
T 2yab_A 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (361)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred CCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence 1223456778888999999999999999999863
No 29
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-43 Score=350.71 Aligned_cols=237 Identities=22% Similarity=0.353 Sum_probs=196.3
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 46799999999999999999986 57899999998764422 22346789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 88 E~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 88 EYCPGGELFDYIISQDR---LSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp ECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred eCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 99999999999976443 89999999999999999999999 9999999999999999999999999999865432
Q ss_pred C-CCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccc
Q 035761 473 S-SNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNI 533 (560)
Q Consensus 473 ~-~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~ 533 (560)
. ......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... .+..+...+
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 241 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLL 241 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHH
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 2 22344579999999999988775 8899999999999999999999975432 122344567
Q ss_pred ccccccCCCCCCChhHHHhhceee
Q 035761 534 KLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
+.|...||..||+++++++|+|+.
T Consensus 242 ~~~L~~dP~~Rps~~eil~hp~~~ 265 (347)
T 3zgw_A 242 QQMLQVDPKKRISMKNLLNHPWIM 265 (347)
T ss_dssp HHHTCSSGGGSCCHHHHHTCHHHH
T ss_pred HHHcccCHhHCcCHHHHhcCcchh
Confidence 788899999999999999999975
No 30
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=8.6e-43 Score=353.25 Aligned_cols=238 Identities=24% Similarity=0.346 Sum_probs=202.6
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 390 (560)
.++|++.+.||+|+||.||+|+.+ +++.||+|++++... .....+.+.+|..++.++ +||||+++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357999999999999999999875 578899999976542 222334578899999887 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+++|+|.+++...+. +++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 9999999999999976443 99999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------------
Q 035761 471 YDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------------- 524 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------------- 524 (560)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 444455567899999999999999999999999999999999999999963321
Q ss_pred cccccccccccccccCCCCCCCh------hHHHhhceee
Q 035761 525 SSSSLDKNIKLIDLLDPRLPPPG------DQMIRQGIIL 557 (560)
Q Consensus 525 ~~~~~~~~~~~~~~~dp~~~p~~------~~~~~~~~~~ 557 (560)
.+..+...++.|...||..||.+ +++++|+|+.
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~ 323 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTT
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCcccc
Confidence 11223456677788899999985 7999999975
No 31
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.3e-43 Score=343.82 Aligned_cols=236 Identities=29% Similarity=0.435 Sum_probs=195.0
Q ss_pred HhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
..++|++.+.||+|+||.||+|+. .|+.||||++..........+.+.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356789999999999999999987 5889999998765544455678899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPP--ILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||+++|+|.+++........+++.++..++.||+.||+|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999998765444589999999999999999999998 8 9999999999999999999999999998654
Q ss_pred CCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-------------------ccccccc
Q 035761 471 YDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------SSSSLDK 531 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------~~~~~~~ 531 (560)
..........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 270 (309)
T 3p86_A 191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA 270 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHH
T ss_pred ccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHH
Confidence 433334456799999999999999999999999999999999999999975432 1223456
Q ss_pred ccccccccCCCCCCChhHHHh
Q 035761 532 NIKLIDLLDPRLPPPGDQMIR 552 (560)
Q Consensus 532 ~~~~~~~~dp~~~p~~~~~~~ 552 (560)
.++.|...||..||+++++++
T Consensus 271 li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 271 IIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp HHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHH
Confidence 667788889999999999887
No 32
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.4e-42 Score=345.33 Aligned_cols=238 Identities=24% Similarity=0.341 Sum_probs=204.3
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 391 (560)
++|++.+.||+|+||.||+|+.+ +++.||+|++..... .....+.+.+|..+++++ +||||+++++++.+++..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56899999999999999999875 588999999976542 234456788999999988 899999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999997643 389999999999999999999999 999999999999999999999999999987544
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------------c
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------------S 525 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------------~ 525 (560)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||...+. .
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~ 242 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL 242 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTS
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCC
Confidence 44445556899999999999999999999999999999999999999964221 1
Q ss_pred ccccccccccccccCCCCCCCh------hHHHhhceeee
Q 035761 526 SSSLDKNIKLIDLLDPRLPPPG------DQMIRQGIILI 558 (560)
Q Consensus 526 ~~~~~~~~~~~~~~dp~~~p~~------~~~~~~~~~~~ 558 (560)
...+...++.|...||..||++ ++++.|+|+.+
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 1223455677788899999996 79999999753
No 33
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.2e-42 Score=346.94 Aligned_cols=239 Identities=22% Similarity=0.353 Sum_probs=206.0
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 389 (560)
..++|++.+.||+|+||.||+|+.+ +|+.||+|+++.... .....+.+..|..++..+ +||||+++++++.+++..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4578999999999999999999875 588999999976432 223456678899999877 9999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 95 lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999976433 89999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKN 532 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~ 532 (560)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||...+. .+..+...
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 248 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDL 248 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHH
Confidence 4444445556799999999999999999999999999999999999999975432 12334566
Q ss_pred cccccccCCCCCCChh-HHHhhceee
Q 035761 533 IKLIDLLDPRLPPPGD-QMIRQGIIL 557 (560)
Q Consensus 533 ~~~~~~~dp~~~p~~~-~~~~~~~~~ 557 (560)
++.|...||..||++. ++.+|+|+.
T Consensus 249 i~~lL~~dp~~R~~~~~~i~~hp~f~ 274 (345)
T 1xjd_A 249 LVKLFVREPEKRLGVRGDIRQHPLFR 274 (345)
T ss_dssp HHHHSCSSGGGSBTTBSCGGGSGGGT
T ss_pred HHHHhcCCHhHcCCChHHHHcCcccc
Confidence 6778888999999998 999999875
No 34
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-42 Score=342.26 Aligned_cols=236 Identities=24% Similarity=0.276 Sum_probs=205.0
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|... +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 367899999999999999999875 57899999987543 22356889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC--CCcEEEeeeccccccC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS--EFEAFVADFGIARLLN 470 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~ 470 (560)
||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 81 EFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 9999999999997543 2389999999999999999999999 9999999999999987 7899999999998875
Q ss_pred CCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------ccccc
Q 035761 471 YDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSSL 529 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~~ 529 (560)
.. .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ....+
T Consensus 156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 234 (321)
T 1tki_A 156 PG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234 (321)
T ss_dssp TT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHH
T ss_pred CC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHH
Confidence 32 334456799999999999998899999999999999999999999965432 12334
Q ss_pred ccccccccccCCCCCCChhHHHhhceeee
Q 035761 530 DKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 530 ~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+.++.|...||..||++.++++|+|+..
T Consensus 235 ~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 263 (321)
T 1tki_A 235 MDFVDRLLVKERKSRMTASEALQHPWLKQ 263 (321)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred HHHHHHHcCCChhHCcCHHHHhcChhhcc
Confidence 56678888999999999999999999864
No 35
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-42 Score=344.97 Aligned_cols=236 Identities=24% Similarity=0.350 Sum_probs=202.1
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|.+.+.||+|+||.||+|.. .+++.||||++..... .......+.+|+.+++.++||||+++++++..++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5789999999999999999986 5789999999875432 2233457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+ +|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKR---MTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp CCC-CEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred ECC-CCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 999 6899998875433 89999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
......+||+.|+|||++.+..+ ++++||||+||++|||++|+.||..... ....+.+.++
T Consensus 162 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 240 (336)
T 3h4j_B 162 -NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIR 240 (336)
T ss_dssp -BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHH
T ss_pred -cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 23344579999999999988876 6799999999999999999999975432 1123445667
Q ss_pred cccccCCCCCCChhHHHhhceeee
Q 035761 535 LIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.|...||..||+++++++|+|+..
T Consensus 241 ~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 241 RMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp TTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred HHcCCChhHCcCHHHHHhChhhcc
Confidence 788899999999999999999753
No 36
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-42 Score=339.86 Aligned_cols=235 Identities=27% Similarity=0.388 Sum_probs=204.7
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|+.+ +|+.||+|+++.... .....+.+.+|..+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56899999999999999999875 689999999976432 2344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQR---FPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp CCCCSCBHHHHHHHTSS---CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred eCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 99999999999986543 89999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIKL 535 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~~ 535 (560)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||...+. ....+...++.
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~ 236 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSR 236 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 22345799999999999999999999999999999999999999964432 12234556677
Q ss_pred ccccCCCCCC-----ChhHHHhhceeee
Q 035761 536 IDLLDPRLPP-----PGDQMIRQGIILI 558 (560)
Q Consensus 536 ~~~~dp~~~p-----~~~~~~~~~~~~~ 558 (560)
|...||..|| ++++++.|+|+..
T Consensus 237 lL~~dp~~R~~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 237 LITRDLSQRLGNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp HTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred HhccCHHHcCCCcCCCHHHHhcCccccC
Confidence 8888999999 8999999999853
No 37
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.3e-42 Score=347.98 Aligned_cols=239 Identities=23% Similarity=0.350 Sum_probs=206.1
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
..++|++.+.||+|+||.||+|..+ +|+.||+|++..........+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3467999999999999999999865 589999999976544444556789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC---cEEEeeeccccc
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF---EAFVADFGIARL 468 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~ 468 (560)
|||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||++..
T Consensus 107 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp ECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999999987643 389999999999999999999999 999999999999998654 599999999987
Q ss_pred cCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------ccc
Q 035761 469 LNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSS 527 (560)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~ 527 (560)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...+. ...
T Consensus 181 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 259 (362)
T 2bdw_A 181 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP 259 (362)
T ss_dssp CTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCH
T ss_pred ecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCH
Confidence 6532 233445799999999999999999999999999999999999999964331 122
Q ss_pred ccccccccccccCCCCCCChhHHHhhceeee
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+.+.+..|...||..||++.++++|+|+..
T Consensus 260 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 290 (362)
T 2bdw_A 260 EAKSLIDSMLTVNPKKRITADQALKVPWICN 290 (362)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence 3456677888899999999999999999853
No 38
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.1e-42 Score=338.67 Aligned_cols=238 Identities=21% Similarity=0.288 Sum_probs=201.0
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46889999999999999999875 58999999997655444455678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++ ++.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp CCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred cCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence 9986 5655555432 2389999999999999999999999 99999999999999999999999999998876544
Q ss_pred CCceeeccccCccCccccccCc-cCcchhHHHHHHHHHHHHhCCCCCCccccc---------------------------
Q 035761 474 SNRTLLAGTYGSIAPELAYTMV-VTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------------- 525 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~-~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------------- 525 (560)
.......||+.|+|||++.+.. ++.++||||+||++|||++|..||....+.
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 4455567899999999988766 799999999999999999988885322210
Q ss_pred --------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 --------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 --------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||+++++++|+|+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 288 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence 112235667788899999999999999999864
No 39
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.7e-42 Score=346.53 Aligned_cols=242 Identities=21% Similarity=0.272 Sum_probs=205.4
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhh---hhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETE---LASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
.++|++.+.||+|+||.||+|..+ +++.||||++...... ....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356899999999999999999864 6899999998654321 123567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCC-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc---EEEeeecc
Q 035761 390 LIYEYMEMGSLFCILRTDE-EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE---AFVADFGI 465 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~ 465 (560)
+||||+++|+|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988876432 223489999999999999999999999 9999999999999987655 99999999
Q ss_pred ccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------c
Q 035761 466 ARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------S 525 (560)
Q Consensus 466 ~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~ 525 (560)
++.............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 259 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTTS
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccccC
Confidence 98876544434456799999999999999999999999999999999999999964321 1
Q ss_pred ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||++.++++|+|+..
T Consensus 260 s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~ 292 (351)
T 3c0i_A 260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292 (351)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence 233456677888999999999999999999853
No 40
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.6e-42 Score=340.15 Aligned_cols=238 Identities=26% Similarity=0.308 Sum_probs=199.3
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999875 58999999987655444556678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++++|.+++..... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~~l~~~~~~~~~---~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp CCSEEHHHHHHHTSSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred eCCCchHHHHHhhhcC---CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 9999999998875443 89999999999999999999999 99999999999999999999999999998876544
Q ss_pred CCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCccccc---------------------------
Q 035761 474 SNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------------- 525 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------------- 525 (560)
.......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 44455678999999999876 66899999999999999999999999654321
Q ss_pred ---------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ---------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ---------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||+++++++|+|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 290 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHh
Confidence 111334677788999999999999999999875
No 41
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.3e-42 Score=356.64 Aligned_cols=245 Identities=25% Similarity=0.300 Sum_probs=202.5
Q ss_pred HHHHHHhcCCcccceeeccCCeeEEEEEeCC-CcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC
Q 035761 308 QDMIEATEDFDIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHE 385 (560)
Q Consensus 308 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 385 (560)
.++....++|++.+.||+|+||.||+|+.+. ++.||+|++++... .....+.+.+|..++..++||||+++++++.++
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 3444456789999999999999999998764 78999999976432 122233488999999999999999999999999
Q ss_pred CEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecc
Q 035761 386 KCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGI 465 (560)
Q Consensus 386 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 465 (560)
+..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999998632 2389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC-ceeeccccCccCccccc-----cCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------
Q 035761 466 ARLLNYDSSN-RTLLAGTYGSIAPELAY-----TMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------- 524 (560)
Q Consensus 466 ~~~~~~~~~~-~~~~~g~~~~~aPE~~~-----~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------- 524 (560)
++........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||...+.
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~ 301 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ 301 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccccc
Confidence 9876543332 23357999999999987 56789999999999999999999999964431
Q ss_pred -------cccccccccccccccCCCC--CCChhHHHhhceee
Q 035761 525 -------SSSSLDKNIKLIDLLDPRL--PPPGDQMIRQGIIL 557 (560)
Q Consensus 525 -------~~~~~~~~~~~~~~~dp~~--~p~~~~~~~~~~~~ 557 (560)
.+......++.+...+|+. ||+++++++|+|+.
T Consensus 302 ~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~ 343 (437)
T 4aw2_A 302 FPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFS 343 (437)
T ss_dssp CCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGT
T ss_pred CCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccC
Confidence 1122333444555556776 99999999999985
No 42
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.7e-42 Score=343.87 Aligned_cols=237 Identities=27% Similarity=0.374 Sum_probs=200.5
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|++.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 57999999999999999999875 789999999865432 1233568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 86 ~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 86 YCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp CCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred cCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 9999999999976433 89999999999999999999999 99999999999999999999999999998764322
Q ss_pred --CCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCccccc--------------------ccccc
Q 035761 474 --SNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------SSSLD 530 (560)
Q Consensus 474 --~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------~~~~~ 530 (560)
.......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||...... ...+.
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHH
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHH
Confidence 22234578999999999988775 67899999999999999999999754431 12234
Q ss_pred cccccccccCCCCCCChhHHHhhceeee
Q 035761 531 KNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 531 ~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+.++.|...||..||+++++++|+|+..
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h~~~~~ 267 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKDRWYNK 267 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred HHHHHHccCChhhCcCHHHHhhChhhcc
Confidence 5567788899999999999999999864
No 43
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.4e-43 Score=355.32 Aligned_cols=242 Identities=22% Similarity=0.274 Sum_probs=202.4
Q ss_pred HHHHhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCE
Q 035761 310 MIEATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKC 387 (560)
Q Consensus 310 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 387 (560)
+....++|++.+.||+|+||.||+|+.+ +++.||+|++++... .....+.+.+|..+++.++||||+++++++.+++.
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3344578999999999999999999875 588999999976432 22233457899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||+++|+|.++++.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 144 ~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 99999999999999999753 289999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CceeeccccCccCccccccCc----cCcchhHHHHHHHHHHHHhCCCCCCcccc------------------
Q 035761 468 LLNYDSS-NRTLLAGTYGSIAPELAYTMV----VTEKYDVYSFGVVALEVLMGKHPGELLSS------------------ 524 (560)
Q Consensus 468 ~~~~~~~-~~~~~~g~~~~~aPE~~~~~~----~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------------ 524 (560)
....... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 296 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCC
Confidence 7653322 123457999999999988765 78899999999999999999999964431
Q ss_pred ---cccccccccccccccCCCC--CCChhHHHhhceeee
Q 035761 525 ---SSSSLDKNIKLIDLLDPRL--PPPGDQMIRQGIILI 558 (560)
Q Consensus 525 ---~~~~~~~~~~~~~~~dp~~--~p~~~~~~~~~~~~~ 558 (560)
.+..+...++.|...+|.. ||+++++++|+|+.+
T Consensus 297 ~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~ 335 (410)
T 3v8s_A 297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335 (410)
T ss_dssp TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence 1122344555666667777 999999999999864
No 44
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-42 Score=346.32 Aligned_cols=252 Identities=38% Similarity=0.663 Sum_probs=212.4
Q ss_pred CCCcCHHHHHHHhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeE
Q 035761 302 DGRITFQDMIEATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGF 381 (560)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 381 (560)
...+++.++....++|+..+.||+|+||.||+|+.++++.||||++...... .....+.+|+++++.++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3467889999999999999999999999999999888999999999764432 222368899999999999999999999
Q ss_pred EEeCCEEEEEEeccCCCCHHHHhhcCCc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEE
Q 035761 382 CLHEKCMFLIYEYMEMGSLFCILRTDEE-AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFV 460 (560)
Q Consensus 382 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 460 (560)
+..++..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+...++|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 9999999999999999999999986532 334899999999999999999999987779999999999999999999999
Q ss_pred eeeccccccCCCCCC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------
Q 035761 461 ADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS-------------- 525 (560)
Q Consensus 461 ~Dfg~~~~~~~~~~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~-------------- 525 (560)
+|||+++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||+.....
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999999876543332 23345899999999999999999999999999999999999999521100
Q ss_pred ----------------------ccccccccccccccCCCCCCChhHHHhhc
Q 035761 526 ----------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQG 554 (560)
Q Consensus 526 ----------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~ 554 (560)
...+.+.+..|...||..||++++++++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 306 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306 (326)
T ss_dssp TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence 01234555677888999999999999873
No 45
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.5e-42 Score=343.84 Aligned_cols=238 Identities=22% Similarity=0.287 Sum_probs=205.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeCC-CcEEEEEEccchhh-hhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRLET-ELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 390 (560)
.++|++.+.||+|+||.||+|+.+. ++.||+|+++.... .....+.+.+|..++..+ +||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 4679999999999999999998764 78999999976542 234456788999999988 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+++|+|.+++...+. +++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 99 v~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999976433 89999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccc
Q 035761 471 YDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNI 533 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~ 533 (560)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ....+...+
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 252 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAIC 252 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 444445556799999999999999999999999999999999999999975432 122345666
Q ss_pred ccccccCCCCCCC-----hhHHHhhceee
Q 035761 534 KLIDLLDPRLPPP-----GDQMIRQGIIL 557 (560)
Q Consensus 534 ~~~~~~dp~~~p~-----~~~~~~~~~~~ 557 (560)
+.|...||..||. +++++.|+|+.
T Consensus 253 ~~lL~~dP~~R~~~~~~~~~~i~~h~~f~ 281 (353)
T 2i0e_A 253 KGLMTKHPGKRLGCGPEGERDIKEHAFFR 281 (353)
T ss_dssp HHHTCSCTTSCTTCSTTHHHHHHTSGGGT
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcCcccc
Confidence 7788889999995 58999999874
No 46
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.9e-42 Score=340.03 Aligned_cols=238 Identities=24% Similarity=0.333 Sum_probs=204.8
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhh----hhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETEL----ASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
.+.|++.+.||+|+||.||+|... +|+.||+|.+....... ...+.+.+|+.+++.++||||+++++++..++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356889999999999999999875 58999999987543211 1356788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC----cEEEeeec
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF----EAFVADFG 464 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 464 (560)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999997643 389999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------- 524 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------- 524 (560)
+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHT
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccc
Confidence 998765332 23345699999999999999999999999999999999999999964331
Q ss_pred -cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||++.++++|+|+..
T Consensus 243 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 277 (326)
T 2y0a_A 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277 (326)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence 1223445667888999999999999999999864
No 47
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-42 Score=338.43 Aligned_cols=237 Identities=21% Similarity=0.231 Sum_probs=195.5
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|+..+.||+|+||.||+|... +|+.||||++............+..|+..+..+ +||||+++++++.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999876 689999999865443333334455566555555 9999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+ +++|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp ECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred ecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 999 679988887643 2499999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------cccccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS----------------SSSSLDKNIKLI 536 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~----------------~~~~~~~~~~~~ 536 (560)
.......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ....+.+.++.|
T Consensus 211 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 288 (311)
T 3p1a_A 211 -GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMM 288 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHH
T ss_pred -CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHH
Confidence 22334568999999998876 689999999999999999999766542221 233456777888
Q ss_pred cccCCCCCCChhHHHhhceeeec
Q 035761 537 DLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 537 ~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
...||..||+++++++++|+..|
T Consensus 289 L~~dP~~Rpt~~ell~hp~~~~p 311 (311)
T 3p1a_A 289 LEPDPKLRATAEALLALPVLRQP 311 (311)
T ss_dssp SCSSTTTSCCHHHHHTSGGGSCC
T ss_pred cCCChhhCcCHHHHHhCccccCC
Confidence 99999999999999999999765
No 48
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.8e-42 Score=341.65 Aligned_cols=228 Identities=25% Similarity=0.294 Sum_probs=178.9
Q ss_pred cceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CCCcceeeeEEEeCCEEEEEEeccCC
Q 035761 320 KYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIR-HRNIVKLYGFCLHEKCMFLIYEYMEM 397 (560)
Q Consensus 320 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (560)
.+.||+|+||.||+|..+ +++.||||++.... ...+.+|+.+++.++ ||||+++++++.++...++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM-----EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG-----HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh-----hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 377999999999999875 58999999986532 346778999999996 99999999999999999999999999
Q ss_pred CCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC---cEEEeeeccccccCCCCC
Q 035761 398 GSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF---EAFVADFGIARLLNYDSS 474 (560)
Q Consensus 398 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~~~~~~~ 474 (560)
|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 91 ~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 91 GELFERIKKKKH---FSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp CBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred CcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 999999987543 89999999999999999999999 999999999999997765 799999999987655444
Q ss_pred CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------------------cc
Q 035761 475 NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS----------------------------SS 526 (560)
Q Consensus 475 ~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~----------------------------~~ 526 (560)
......||+.|+|||++.+..++.++||||+|+++|||++|+.||...+. ..
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 244 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSC
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCC
Confidence 44556789999999999999999999999999999999999999975332 12
Q ss_pred cccccccccccccCCCCCCChhHHHhhceeee
Q 035761 527 SSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 527 ~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
..+.+.++.|...||..||+++++++|+|+..
T Consensus 245 ~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~ 276 (325)
T 3kn6_A 245 QEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD 276 (325)
T ss_dssp HHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred HHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence 33455677888899999999999999999975
No 49
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=9.3e-42 Score=341.58 Aligned_cols=234 Identities=24% Similarity=0.318 Sum_probs=205.0
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|+.+ +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57899999999999999999875 689999999976542 2345567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp ECCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred cCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 99999999999986433 89999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIKL 535 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~~ 535 (560)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+...++.
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~ 271 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHH
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 2345799999999999999999999999999999999999999964431 12334566677
Q ss_pred ccccCCCCCCC-----hhHHHhhceee
Q 035761 536 IDLLDPRLPPP-----GDQMIRQGIIL 557 (560)
Q Consensus 536 ~~~~dp~~~p~-----~~~~~~~~~~~ 557 (560)
|...||..||+ ++++++|+|+.
T Consensus 272 lL~~dp~~R~~~~~~~~~ei~~h~~f~ 298 (350)
T 1rdq_E 272 LLQVDLTKRFGNLKNGVNDIKNHKWFA 298 (350)
T ss_dssp HSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred HhhcCHHhccCCccCCHHHHHhCcCcC
Confidence 88899999998 99999999975
No 50
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.4e-42 Score=343.56 Aligned_cols=241 Identities=20% Similarity=0.313 Sum_probs=202.3
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC------
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK------ 386 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 386 (560)
.++|++.+.||+|+||.||+|+.+ +|+.||||++..... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST-TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 457899999999999999999876 789999999875432 234567899999999999999999999986543
Q ss_pred ---------------------------------------------------EEEEEEeccCCCCHHHHhhcCCcccCCCH
Q 035761 387 ---------------------------------------------------CMFLIYEYMEMGSLFCILRTDEEAVGLDW 415 (560)
Q Consensus 387 ---------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~ 415 (560)
..++||||+++|+|.+++.........++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37999999999999999988766556788
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCCC------------Cceeecccc
Q 035761 416 TKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS------------NRTLLAGTY 483 (560)
Q Consensus 416 ~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~g~~ 483 (560)
..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 88999999999999999999 999999999999999999999999999987754321 122346899
Q ss_pred CccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------cccccccccccccccCCCCCCCh
Q 035761 484 GSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS----------------SSSSLDKNIKLIDLLDPRLPPPG 547 (560)
Q Consensus 484 ~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~----------------~~~~~~~~~~~~~~~dp~~~p~~ 547 (560)
.|+|||++.+..++.++||||+|+++|||++|..|+..... ....+...++.|...||..||++
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 320 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEA 320 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCH
Confidence 99999999999999999999999999999999888642211 11234556788899999999999
Q ss_pred hHHHhhceeee
Q 035761 548 DQMIRQGIILI 558 (560)
Q Consensus 548 ~~~~~~~~~~~ 558 (560)
+++++|+|+.+
T Consensus 321 ~~~l~~~~f~~ 331 (332)
T 3qd2_B 321 TDIIENAIFEN 331 (332)
T ss_dssp HHHHHSTTCCC
T ss_pred HHHhhchhhhc
Confidence 99999999864
No 51
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-42 Score=337.65 Aligned_cols=236 Identities=22% Similarity=0.294 Sum_probs=196.2
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhh------------------------hhhHHHHHHHHHHHhc
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETE------------------------LASLESFQNEARLLSQ 369 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------------------~~~~~~~~~e~~~l~~ 369 (560)
++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+++++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57899999999999999999864 6889999998654311 1123468899999999
Q ss_pred cCCCCcceeeeEEEe--CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCC
Q 035761 370 IRHRNIVKLYGFCLH--EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISS 447 (560)
Q Consensus 370 l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~ 447 (560)
++||||+++++++.+ .+..++||||+++|+|.+++... .+++.++..++.||+.||+|||+. +|+||||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 999999999999987 56899999999999998876432 389999999999999999999999 999999999
Q ss_pred CCeEeCCCCcEEEeeeccccccCCCCCCceeeccccCccCccccccCc---cCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 035761 448 NNILLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMV---VTEKYDVYSFGVVALEVLMGKHPGELLSS 524 (560)
Q Consensus 448 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~---~~~~~Dv~s~G~il~el~~g~~P~~~~~~ 524 (560)
+||+++.++.+||+|||+++.............||+.|+|||++.+.. ++.++||||||+++|||++|+.||.....
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999999987754444344567999999999988765 47789999999999999999999964321
Q ss_pred -------------------cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 525 -------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 525 -------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
....+.+.++.|...||..||+++++++|+|+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 246 MCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 123355677888899999999999999999974
No 52
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.5e-42 Score=342.32 Aligned_cols=238 Identities=23% Similarity=0.329 Sum_probs=194.2
Q ss_pred cCCcccceeeccCCeeEEEEEe----CCCcEEEEEEccchhh--hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL----PSGKVVALKKLHRLET--ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
++|++.+.||+|+||.||+|+. .+++.||+|+++.... .......+.+|+.+++.++||||+++++++..++..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5799999999999999999986 4789999999976431 223345678899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
++||||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEeCCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999976433 89999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccc
Q 035761 469 LNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDK 531 (560)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~ 531 (560)
............||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 250 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARD 250 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHHH
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 54333334445799999999999999999999999999999999999999975432 1223456
Q ss_pred ccccccccCCCCCC-----ChhHHHhhceeee
Q 035761 532 NIKLIDLLDPRLPP-----PGDQMIRQGIILI 558 (560)
Q Consensus 532 ~~~~~~~~dp~~~p-----~~~~~~~~~~~~~ 558 (560)
.++.|...||..|| +++++++|+|+..
T Consensus 251 li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp HHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred HHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence 66778888999998 7889999999854
No 53
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=343.85 Aligned_cols=236 Identities=25% Similarity=0.354 Sum_probs=203.0
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56899999999999999999865 58899999997644 23345567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++..... +++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVH---FKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 99999999999986443 89999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCCceeeccccCccCcccccc---CccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------ccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYT---MVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSSSL 529 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~---~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~~~ 529 (560)
......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ....+
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~ 247 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEM 247 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHH
Confidence 33445679999999999874 4588899999999999999999999974332 12234
Q ss_pred ccccccccccCCCCCCC-hhHHHhhceee
Q 035761 530 DKNIKLIDLLDPRLPPP-GDQMIRQGIIL 557 (560)
Q Consensus 530 ~~~~~~~~~~dp~~~p~-~~~~~~~~~~~ 557 (560)
...++.|...||..||+ ++++..|+|+.
T Consensus 248 ~~li~~lL~~dP~~R~s~~~~l~~hp~f~ 276 (384)
T 4fr4_A 248 VSLLKKLLEPNPDQRFSQLSDVQNFPYMN 276 (384)
T ss_dssp HHHHHHHSCSSGGGSCCSHHHHHTSGGGT
T ss_pred HHHHHHHhcCCHhHhcccHHHHHcChhhh
Confidence 45667788889999998 88999988875
No 54
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-41 Score=347.46 Aligned_cols=241 Identities=18% Similarity=0.283 Sum_probs=205.6
Q ss_pred hcCCcccceeecc--CCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEE
Q 035761 314 TEDFDIKYCIGTG--GYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 314 ~~~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (560)
.++|++.+.||+| +||.||+|+.. +++.||||++..........+.+.+|+.+++.++||||+++++++..++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999876 68999999998765444556778899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+++|+|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+....
T Consensus 104 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 9999999999999976532 2389999999999999999999999 99999999999999999999999999986543
Q ss_pred CCC-------CCceeeccccCccCcccccc--CccCcchhHHHHHHHHHHHHhCCCCCCcccccc---------------
Q 035761 471 YDS-------SNRTLLAGTYGSIAPELAYT--MVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS--------------- 526 (560)
Q Consensus 471 ~~~-------~~~~~~~g~~~~~aPE~~~~--~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~--------------- 526 (560)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 259 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence 211 11122468899999999987 678999999999999999999999997543211
Q ss_pred ------------------------------------------------cccccccccccccCCCCCCChhHHHhhceeee
Q 035761 527 ------------------------------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 527 ------------------------------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
..+.+.++.|...||..||+++++++|+|+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~ 339 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence 11334667788999999999999999999863
No 55
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.3e-42 Score=339.64 Aligned_cols=240 Identities=23% Similarity=0.333 Sum_probs=188.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|..+ +|+.||+|+++.... ....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 457889999999999999999865 589999999875432 223356789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCC---cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 393 EYMEMGSLFCILRTDE---EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
||++ |+|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 59999886532 123489999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCccccc-----------------------
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS----------------------- 525 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~----------------------- 525 (560)
...........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence 544444445578999999999876 46899999999999999999999999643310
Q ss_pred ----------------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ----------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ----------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||+++++++|+|+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 299 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence 112334556788889999999999999999863
No 56
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-41 Score=343.46 Aligned_cols=237 Identities=23% Similarity=0.308 Sum_probs=204.5
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|... +|+.||+|.+..... .....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch--hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 357999999999999999999865 688999999875432 23357889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC--CCcEEEeeeccccccC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS--EFEAFVADFGIARLLN 470 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~ 470 (560)
||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 128 E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 128 EFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp ECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 9999999999997543 2389999999999999999999999 9999999999999974 4779999999998865
Q ss_pred CCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------ccccc
Q 035761 471 YDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSSL 529 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~~ 529 (560)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+
T Consensus 203 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 281 (387)
T 1kob_A 203 PD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281 (387)
T ss_dssp TT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred CC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHH
Confidence 33 233445799999999999999999999999999999999999999975431 12234
Q ss_pred ccccccccccCCCCCCChhHHHhhceeee
Q 035761 530 DKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 530 ~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+.++.|...||..||+++++++|+|+..
T Consensus 282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (387)
T 1kob_A 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKG 310 (387)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred HHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence 56677888999999999999999999864
No 57
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=330.34 Aligned_cols=239 Identities=25% Similarity=0.411 Sum_probs=184.4
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|.. .+|+.||||.+..... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688999999999999999986 4789999999975432 2233567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++++|.+++.... ..+++.++..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp ECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred ecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 9999999999998643 2389999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc-----------------cccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS-----------------SSSLDKNIKL 535 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~-----------------~~~~~~~~~~ 535 (560)
........|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... ...+.+.++.
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 245 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQ 245 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHH
Confidence 33334457899999999999989999999999999999999999999754321 1223456677
Q ss_pred ccccCCCCCCChhHHHhhceeee
Q 035761 536 IDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 536 ~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
|...||..||+++++++|+|+..
T Consensus 246 ~l~~dp~~Rps~~~~l~h~~~~~ 268 (278)
T 3cok_A 246 LLRRNPADRLSLSSVLDHPFMSR 268 (278)
T ss_dssp HSCSSGGGSCCHHHHTTSTTTC-
T ss_pred HcccCHhhCCCHHHHhcCccccC
Confidence 88899999999999999999865
No 58
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.1e-41 Score=332.40 Aligned_cols=231 Identities=27% Similarity=0.445 Sum_probs=195.2
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD--EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 56888999999999999999875 58999999886533 3445678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++|+|.+++..... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CCTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred ecCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 9999999999986432 389999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCc--------------eeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------
Q 035761 474 SNR--------------TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS-------------- 525 (560)
Q Consensus 474 ~~~--------------~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~-------------- 525 (560)
... ....||+.|+|||++.+..++.++||||||+++|||++|..||......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc
Confidence 111 1346899999999999999999999999999999999999998653321
Q ss_pred ------ccccccccccccccCCCCCCChhHHHh
Q 035761 526 ------SSSLDKNIKLIDLLDPRLPPPGDQMIR 552 (560)
Q Consensus 526 ------~~~~~~~~~~~~~~dp~~~p~~~~~~~ 552 (560)
...+.+.+..|...||..||+++++++
T Consensus 243 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 243 YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 123445666777778888888887765
No 59
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-42 Score=349.64 Aligned_cols=244 Identities=23% Similarity=0.313 Sum_probs=201.1
Q ss_pred HHHHHHhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC
Q 035761 308 QDMIEATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHE 385 (560)
Q Consensus 308 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 385 (560)
++.....++|++.+.||+|+||.||+|+.+ +|+.||||++++... .....+.+.+|..++..++||||+++++++.++
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 333444678999999999999999999875 689999999975432 223344688999999999999999999999999
Q ss_pred CEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecc
Q 035761 386 KCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGI 465 (560)
Q Consensus 386 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 465 (560)
+..++||||+++|+|.+++...+ ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||+
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 99999999999999999997643 2389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC-ceeeccccCccCccccc-------cCccCcchhHHHHHHHHHHHHhCCCCCCccccc------------
Q 035761 466 ARLLNYDSSN-RTLLAGTYGSIAPELAY-------TMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS------------ 525 (560)
Q Consensus 466 ~~~~~~~~~~-~~~~~g~~~~~aPE~~~-------~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~------------ 525 (560)
++........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||...+..
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~ 288 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH 288 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence 9876543322 22357999999999987 456899999999999999999999999654321
Q ss_pred ----------ccccccccccccccCCCCC---CChhHHHhhceee
Q 035761 526 ----------SSSLDKNIKLIDLLDPRLP---PPGDQMIRQGIIL 557 (560)
Q Consensus 526 ----------~~~~~~~~~~~~~~dp~~~---p~~~~~~~~~~~~ 557 (560)
...+...++.|.. +|..| |+++++++|+|+.
T Consensus 289 ~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~ 332 (412)
T 2vd5_A 289 LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFF 332 (412)
T ss_dssp CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGT
T ss_pred cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcC
Confidence 1122344455555 77766 6899999999874
No 60
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.3e-42 Score=356.49 Aligned_cols=238 Identities=20% Similarity=0.280 Sum_probs=196.1
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|... +|+.||||++..... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 57899999999999999999864 689999999975432 2334456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHH-HCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
||+++|+|.+++.... .+++.++..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++....
T Consensus 228 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 228 EYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp CCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred eeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 9999999999997644 38999999999999999999998 7 999999999999999999999999999987544
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ....+...+.
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 381 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 381 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence 44444556799999999999999999999999999999999999999965432 1223456678
Q ss_pred cccccCCCCCC-----ChhHHHhhceeee
Q 035761 535 LIDLLDPRLPP-----PGDQMIRQGIILI 558 (560)
Q Consensus 535 ~~~~~dp~~~p-----~~~~~~~~~~~~~ 558 (560)
.|...||..|| +++++++|+|+..
T Consensus 382 ~~L~~dP~~R~~~~~~t~~ell~hp~f~~ 410 (446)
T 4ejn_A 382 GLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410 (446)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred HHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence 88899999999 9999999999864
No 61
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-41 Score=351.87 Aligned_cols=236 Identities=24% Similarity=0.379 Sum_probs=205.1
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56889999999999999999875 689999999976442 2234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 E~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 96 EYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp ECCSSEEHHHHTTSSSS---CCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred eCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 99999999999976443 89999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ....+...++
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~ 248 (476)
T 2y94_A 170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLK 248 (476)
T ss_dssp -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHHH
T ss_pred -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHHH
Confidence 33344579999999999988765 6799999999999999999999975432 1223456677
Q ss_pred cccccCCCCCCChhHHHhhceee
Q 035761 535 LIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
.|...||..||+++++++|+|+.
T Consensus 249 ~~L~~dP~~Rpt~~eil~hp~~~ 271 (476)
T 2y94_A 249 HMLQVDPMKRATIKDIREHEWFK 271 (476)
T ss_dssp HHTCSSTTTSCCHHHHHTCHHHH
T ss_pred HHcCCCchhCcCHHHHHhCHHhh
Confidence 88899999999999999999975
No 62
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.4e-41 Score=329.73 Aligned_cols=238 Identities=23% Similarity=0.356 Sum_probs=205.9
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999865 5899999999765544455567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc---EEEeeecccccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE---AFVADFGIARLL 469 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~~~ 469 (560)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++...
T Consensus 85 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 9999999998887643 389999999999999999999999 9999999999999987655 999999999876
Q ss_pred CCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cccc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSS 528 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~ 528 (560)
... .......|++.|+|||++.+..++.++||||+|+++|||++|+.||..... ....
T Consensus 159 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T 3kk8_A 159 NDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237 (284)
T ss_dssp CSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred ccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHH
Confidence 532 223345689999999999999999999999999999999999999954431 1233
Q ss_pred cccccccccccCCCCCCChhHHHhhceeee
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+.+.++.|...||..||+++++++|+|+.+
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (284)
T 3kk8_A 238 AKSLIDSMLTVNPKKRITADQALKVPWICN 267 (284)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTTSHHHHS
T ss_pred HHHHHHHHcccChhhCCCHHHHhcCccccC
Confidence 556677788999999999999999999865
No 63
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.2e-42 Score=341.54 Aligned_cols=238 Identities=21% Similarity=0.266 Sum_probs=192.5
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|.. .+++.||||+++.........+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 46799999999999999999975 46889999999765544444567789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe-----CCCCcEEEeeecccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL-----NSEFEAFVADFGIAR 467 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill-----~~~~~~kl~Dfg~~~ 467 (560)
||+++ +|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 113 e~~~~-~L~~~~~~~~~---~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 113 EYAEN-DLKKYMDKNPD---VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp ECCSE-EHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred ecCCC-CHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99985 99999986543 89999999999999999999999 99999999999999 455569999999998
Q ss_pred ccCCCCCCceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------------
Q 035761 468 LLNYDSSNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------- 524 (560)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------- 524 (560)
.............||+.|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus 186 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (329)
T 3gbz_A 186 AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGV 265 (329)
T ss_dssp HHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred ccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhh
Confidence 775444444556789999999998875 489999999999999999999999964432
Q ss_pred -------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 324 (329)
T 3gbz_A 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH 324 (329)
T ss_dssp GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCC
Confidence 1122335667788999999999999999999875
No 64
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.6e-42 Score=340.10 Aligned_cols=238 Identities=26% Similarity=0.352 Sum_probs=199.7
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57899999999999999999875 48999999987655444455678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|++++++.++...... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 105 FVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp CCSEEHHHHHHHSTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred cCCcchHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999999888765433 89999999999999999999999 99999999999999999999999999998765544
Q ss_pred CCceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------------------
Q 035761 474 SNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------------- 524 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------------- 524 (560)
.......|++.|+|||++.+. .++.++||||+|+++|||++|+.||.....
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 444556789999999998875 688999999999999999999999975432
Q ss_pred --------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 --------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 --------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||++.++++|+|+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 312 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence 1223456677888999999999999999999864
No 65
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=340.66 Aligned_cols=234 Identities=24% Similarity=0.343 Sum_probs=187.8
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 467899999999999999999876 57899999997543 2346788999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC---CCcEEEeeecccccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS---EFEAFVADFGIARLL 469 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~~~~ 469 (560)
||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 128 e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 128 ELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCCSCBHHHHHTTCSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred EeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 99999999999976443 89999999999999999999999 9999999999999975 889999999999876
Q ss_pred CCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc----------------------cc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS----------------------SS 527 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~----------------------~~ 527 (560)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 202 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 280 (349)
T 2w4o_A 202 EHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSL 280 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCH
T ss_pred Ccc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCH
Confidence 432 2233456899999999999999999999999999999999999999644321 12
Q ss_pred ccccccccccccCCCCCCChhHHHhhceeee
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+.+.++.|...||..||++.++++|+|+..
T Consensus 281 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 311 (349)
T 2w4o_A 281 NAKDLVRKLIVLDPKKRLTTFQALQHPWVTG 311 (349)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 3445667788899999999999999999864
No 66
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.1e-41 Score=355.64 Aligned_cols=240 Identities=22% Similarity=0.270 Sum_probs=206.3
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356889999999999999999875 689999999976442 233456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999997643 23489999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSSLD 530 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~~~ 530 (560)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+..+.
T Consensus 339 ~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~ 417 (576)
T 2acx_A 339 G-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417 (576)
T ss_dssp T-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred C-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHH
Confidence 2 233445799999999999999999999999999999999999999976432 112334
Q ss_pred cccccccccCCCCCC-----ChhHHHhhceeee
Q 035761 531 KNIKLIDLLDPRLPP-----PGDQMIRQGIILI 558 (560)
Q Consensus 531 ~~~~~~~~~dp~~~p-----~~~~~~~~~~~~~ 558 (560)
..++.|...||..|| +++++++|+|+..
T Consensus 418 dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp HHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred HHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence 566777888999999 7899999999864
No 67
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-42 Score=340.88 Aligned_cols=239 Identities=22% Similarity=0.312 Sum_probs=204.7
Q ss_pred HhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhh------hhHHHHHHHHHHHhccCCCCcceeeeEEEeC
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETEL------ASLESFQNEARLLSQIRHRNIVKLYGFCLHE 385 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 385 (560)
..++|++.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|+++++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356799999999999999999985 468899999987643111 1233567899999999999999999999999
Q ss_pred CEEEEEEeccCCC-CHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeec
Q 035761 386 KCMFLIYEYMEMG-SLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFG 464 (560)
Q Consensus 386 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 464 (560)
+..++||||+.+| +|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~---l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 99999986543 89999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCcccc-----------cccccccc
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSS-----------SSSSLDKN 532 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------~~~~~~~~ 532 (560)
+++...... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... ....+...
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~~l 254 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSL 254 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHHHH
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHHHHHH
Confidence 998765432 3344579999999999988876 7899999999999999999999975443 12345566
Q ss_pred cccccccCCCCCCChhHHHhhceeee
Q 035761 533 IKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 533 ~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
++.|...||..||+++++++|+|+..
T Consensus 255 i~~~L~~dP~~Rps~~ell~hp~~~~ 280 (335)
T 3dls_A 255 VSGLLQPVPERRTTLEKLVTDPWVTQ 280 (335)
T ss_dssp HHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred HHHHccCChhhCcCHHHHhcCccccC
Confidence 77888999999999999999999864
No 68
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-41 Score=345.17 Aligned_cols=237 Identities=25% Similarity=0.383 Sum_probs=190.6
Q ss_pred HhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CCCcceeeeEEEeCC--EE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIR-HRNIVKLYGFCLHEK--CM 388 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~ 388 (560)
..++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.+. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 457899999999999999999976 46899999998755444445567789999999997 999999999997654 68
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
++||||++ |+|.+++... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 99999998 5899998753 389999999999999999999999 999999999999999999999999999986
Q ss_pred cCCC---------------------CCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccc--
Q 035761 469 LNYD---------------------SSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSS-- 524 (560)
Q Consensus 469 ~~~~---------------------~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-- 524 (560)
+... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5321 111233579999999999876 6789999999999999999999999964431
Q ss_pred --------------------------------------------------------------cccccccccccccccCCC
Q 035761 525 --------------------------------------------------------------SSSSLDKNIKLIDLLDPR 542 (560)
Q Consensus 525 --------------------------------------------------------------~~~~~~~~~~~~~~~dp~ 542 (560)
....+.+.++.|...||.
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 122345667788899999
Q ss_pred CCCChhHHHhhceee
Q 035761 543 LPPPGDQMIRQGIIL 557 (560)
Q Consensus 543 ~~p~~~~~~~~~~~~ 557 (560)
.||+++++++|+|+.
T Consensus 319 ~R~t~~e~l~Hp~~~ 333 (388)
T 3oz6_A 319 KRISANDALKHPFVS 333 (388)
T ss_dssp GSCCHHHHTTSTTTT
T ss_pred cCCCHHHHhCCHHHH
Confidence 999999999999974
No 69
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.6e-41 Score=353.23 Aligned_cols=241 Identities=22% Similarity=0.290 Sum_probs=206.4
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|+..+.||+|+||.||+|+.+ +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 57888899999999999999875 689999999976542 2234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 393 EYMEMGSLFCILRTDEE-AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
||+++|+|.+++..... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999876432 23499999999999999999999999 999999999999999999999999999988754
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSSLD 530 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~~~ 530 (560)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+.
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~ 421 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHHHH
Confidence 44444455899999999999999999999999999999999999999975421 112344
Q ss_pred cccccccccCCCCCCC-----hhHHHhhceeee
Q 035761 531 KNIKLIDLLDPRLPPP-----GDQMIRQGIILI 558 (560)
Q Consensus 531 ~~~~~~~~~dp~~~p~-----~~~~~~~~~~~~ 558 (560)
..++.|...||..||+ +++++.|+|+..
T Consensus 422 ~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~ 454 (543)
T 3c4z_A 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454 (543)
T ss_dssp HHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred HHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence 5667778889999996 478999998753
No 70
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.1e-41 Score=338.08 Aligned_cols=243 Identities=36% Similarity=0.534 Sum_probs=203.4
Q ss_pred CHHHHHHHhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC
Q 035761 306 TFQDMIEATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE 385 (560)
Q Consensus 306 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 385 (560)
++.++...+++|+..+.||+|+||.||+|.+++++.||||++.... ....+.+.+|+++++.++||||+++++++..+
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 3344445678899999999999999999998889999999987543 23456789999999999999999999999999
Q ss_pred CEEEEEEeccCCCCHHHHhhcCCc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeec
Q 035761 386 KCMFLIYEYMEMGSLFCILRTDEE-AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFG 464 (560)
Q Consensus 386 ~~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 464 (560)
+..++||||+++|+|.+++..... ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999999976432 23589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC--CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccccc---------------
Q 035761 465 IARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSSS--------------- 527 (560)
Q Consensus 465 ~~~~~~~~~~--~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~~--------------- 527 (560)
+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 9987543221 22334689999999999999999999999999999999999999964322110
Q ss_pred -------------------ccccccccccccCCCCCCChhHHHhh
Q 035761 528 -------------------SLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 528 -------------------~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+.+.+..|...||..||++++++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 309 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 01223346778899999999999876
No 71
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=340.43 Aligned_cols=236 Identities=23% Similarity=0.380 Sum_probs=197.8
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCC--CCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRH--RNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|+.+++.++| |||+++++++..+...++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 5688999999999999999998889999999997655444556788999999999976 99999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
| +.+|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 89 e-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp C-CCSEEHHHHHHHSCC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred e-CCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 9 567899999987543 89999999999999999999999 999999999999997 678999999999876533
Q ss_pred CCC--ceeeccccCccCcccccc-----------CccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------
Q 035761 473 SSN--RTLLAGTYGSIAPELAYT-----------MVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------- 524 (560)
Q Consensus 473 ~~~--~~~~~g~~~~~aPE~~~~-----------~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------- 524 (560)
... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 240 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI 240 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc
Confidence 221 234579999999999865 6788899999999999999999999975321
Q ss_pred -----cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -----SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -----~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||++.++++|+|+..
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 1123556677888999999999999999999863
No 72
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=333.89 Aligned_cols=235 Identities=24% Similarity=0.330 Sum_probs=198.8
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC--EEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK--CMFLI 391 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 391 (560)
++|.+.+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 56889999999999999999875 489999999975442 234567889999999999999999999998765 78999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe----CCCCcEEEeeecccc
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL----NSEFEAFVADFGIAR 467 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~~ 467 (560)
|||+++|+|.+++........+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999998765555599999999999999999999999 99999999999999 788889999999998
Q ss_pred ccCCCCCCceeeccccCccCccccc--------cCccCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------
Q 035761 468 LLNYDSSNRTLLAGTYGSIAPELAY--------TMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS------------- 526 (560)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~aPE~~~--------~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~------------- 526 (560)
...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.......
T Consensus 165 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 165 ELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp ECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred ecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 775433 233456899999999886 5778899999999999999999999996322110
Q ss_pred ---------------------------------cccccccccccccCCCCCCChhHHHhhc
Q 035761 527 ---------------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQG 554 (560)
Q Consensus 527 ---------------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~~ 554 (560)
..+...++.|...||..||+++++++|.
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 1233455778888999999999999874
No 73
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.6e-41 Score=341.93 Aligned_cols=234 Identities=26% Similarity=0.302 Sum_probs=191.4
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 357999999999999999999875 689999999975432 2246789999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc--EEEeeeccccccC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE--AFVADFGIARLLN 470 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~~~ 470 (560)
||+++|+|.+++..... +++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++...
T Consensus 96 e~~~~~~L~~~l~~~~~---~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 96 EYASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp ECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 99999999999976433 89999999999999999999999 9999999999999987765 9999999997543
Q ss_pred CCCCCceeeccccCccCccccccCccCcc-hhHHHHHHHHHHHHhCCCCCCccccc-----------------------c
Q 035761 471 YDSSNRTLLAGTYGSIAPELAYTMVVTEK-YDVYSFGVVALEVLMGKHPGELLSSS-----------------------S 526 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~~-~Dv~s~G~il~el~~g~~P~~~~~~~-----------------------~ 526 (560)
.. .......||+.|+|||++.+..++.+ +||||+||++|||++|+.||...... .
T Consensus 170 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 248 (361)
T 3uc3_A 170 LH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRIS 248 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCC
T ss_pred cc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCC
Confidence 22 22334569999999999988887766 89999999999999999999754321 2
Q ss_pred cccccccccccccCCCCCCChhHHHhhceee
Q 035761 527 SSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 527 ~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
..+...++.|...||..||++.++++|+|+.
T Consensus 249 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 279 (361)
T 3uc3_A 249 PECCHLISRIFVADPATRISIPEIKTHSWFL 279 (361)
T ss_dssp HHHHHHHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHhCcchh
Confidence 2344566778899999999999999999984
No 74
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.4e-42 Score=340.17 Aligned_cols=237 Identities=22% Similarity=0.305 Sum_probs=192.7
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|.+.+.||+|+||.||+|... +++.||||++...... .....+.+|+++++.++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 46889999999999999999875 6899999998754321 111235579999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|++ |+|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CCS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred ccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 998 599998876533 389999999999999999999999 99999999999999999999999999998765444
Q ss_pred CCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCccccc---------------------------
Q 035761 474 SNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------------- 525 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------------- 525 (560)
.......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||......
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence 44455678999999999876 56899999999999999999999999654311
Q ss_pred --------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 --------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 --------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||+++++++|+|+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 287 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence 112346677888999999999999999999864
No 75
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.8e-41 Score=332.92 Aligned_cols=238 Identities=24% Similarity=0.319 Sum_probs=205.5
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhh----hhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETEL----ASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
.++|++.+.||+|+||.||+|... +|+.||||.+....... ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356899999999999999999875 58999999987644221 1356789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC----cEEEeeec
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF----EAFVADFG 464 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 464 (560)
++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999997643 389999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------- 524 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------- 524 (560)
++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 243 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHT
T ss_pred cceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhc
Confidence 998765432 23345689999999999999999999999999999999999999964331
Q ss_pred -cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 244 ~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~ 278 (321)
T 2a2a_A 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (321)
T ss_dssp TCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence 1223456678888999999999999999999864
No 76
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.5e-41 Score=339.26 Aligned_cols=234 Identities=22% Similarity=0.306 Sum_probs=200.0
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 390 (560)
..++|++.+.||+|+||.||+|..+ +++.||||++..... ...+|++++.++ +||||+++++++.+++..++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 3567999999999999999999875 588999999975432 234688888887 79999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC----CcEEEeeeccc
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE----FEAFVADFGIA 466 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~ 466 (560)
||||+++|+|.+++..... +++.++..++.||+.||+|||+. ||+||||||+||++.++ +.+||+|||++
T Consensus 94 v~E~~~gg~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp EECCCCSCBHHHHHHTCTT---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 9999999999999976543 89999999999999999999999 99999999999998543 35999999999
Q ss_pred cccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------------
Q 035761 467 RLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------- 524 (560)
Q Consensus 467 ~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------- 524 (560)
+............+||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 168 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 247 (342)
T 2qr7_A 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW 247 (342)
T ss_dssp EECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTT
T ss_pred ccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccc
Confidence 8775544444556789999999999988899999999999999999999999974211
Q ss_pred --cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 --SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 --~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+..+.+.++.|...||+.||++.++++|+|+.+
T Consensus 248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence 1233456678888999999999999999999853
No 77
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3e-41 Score=341.11 Aligned_cols=236 Identities=26% Similarity=0.382 Sum_probs=197.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeC--------CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLH 384 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 384 (560)
.++|++.+.||+|+||.||+|.+. ++..||||+++.... ....+.+.+|+++++.+ +||||+++++++..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB-HHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 367889999999999999999752 356799999976432 34456789999999999 89999999999999
Q ss_pred CCEEEEEEeccCCCCHHHHhhcCCc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeE
Q 035761 385 EKCMFLIYEYMEMGSLFCILRTDEE-------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNIL 451 (560)
Q Consensus 385 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 451 (560)
++..++||||+++|+|.+++..... ...+++.++..++.||++||+|||+. +|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 9999999999999999999986432 13489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc---
Q 035761 452 LNSEFEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS--- 525 (560)
Q Consensus 452 l~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~--- 525 (560)
++.++.+||+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~ 315 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 999999999999999876433221 223456789999999999999999999999999999999 99999754321
Q ss_pred ---------------ccccccccccccccCCCCCCChhHHHhh
Q 035761 526 ---------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 526 ---------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...+.+.++.|...||..||++.+++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 316 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp HHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1134455667778899999999888875
No 78
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.6e-41 Score=342.72 Aligned_cols=241 Identities=23% Similarity=0.301 Sum_probs=203.3
Q ss_pred CHHHHHHHhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-----CCCcceee
Q 035761 306 TFQDMIEATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIR-----HRNIVKLY 379 (560)
Q Consensus 306 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~ 379 (560)
++.+.....++|++.+.||+|+||.||+|+. .+++.||||+++... ...+.+..|+++++.++ ||||++++
T Consensus 26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK---KYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH---HHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch---hhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 3333344467899999999999999999987 468899999997433 23346678999999886 99999999
Q ss_pred eEEEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC-----
Q 035761 380 GFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS----- 454 (560)
Q Consensus 380 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~----- 454 (560)
+++...+..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCE
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccc
Confidence 9999999999999999 8999999986542 2389999999999999999999999 9999999999999975
Q ss_pred --------------------CCcEEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh
Q 035761 455 --------------------EFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM 514 (560)
Q Consensus 455 --------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~ 514 (560)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++|||++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 254 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS---CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCC---CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH
Confidence 78899999999987543 2234568999999999999999999999999999999999
Q ss_pred CCCCCCcccccc---------------------------------------------------------------ccccc
Q 035761 515 GKHPGELLSSSS---------------------------------------------------------------SSLDK 531 (560)
Q Consensus 515 g~~P~~~~~~~~---------------------------------------------------------------~~~~~ 531 (560)
|+.||....... ..+.+
T Consensus 255 g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (360)
T 3llt_A 255 GSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCD 334 (360)
T ss_dssp SSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHH
Confidence 999996433100 12236
Q ss_pred ccccccccCCCCCCChhHHHhhceee
Q 035761 532 NIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 532 ~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
.++.|...||..||+++++++|+|++
T Consensus 335 li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 335 FLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHHHhcCChhhCCCHHHHhcCcccC
Confidence 67788899999999999999999974
No 79
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.9e-41 Score=327.36 Aligned_cols=237 Identities=32% Similarity=0.480 Sum_probs=201.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
.++|++.+.||+|+||.||+|... +++.||||++..... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 357899999999999999999765 577999999875442 223356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++|+|.+++..... +++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 999999999999976433 89999999999999999999998 999999999999999999999999999866432
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
.......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ....+.+.++
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 239 (279)
T 3fdn_A 162 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 239 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred --ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHH
Confidence 223345689999999999999999999999999999999999999975432 1223456778
Q ss_pred cccccCCCCCCChhHHHhhceeee
Q 035761 535 LIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.|...||..||+++++++|+|+..
T Consensus 240 ~~l~~~p~~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 240 RLLKHNPSQRPMLREVLEHPWITA 263 (279)
T ss_dssp HHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred HHhccChhhCCCHHHHhhCccccC
Confidence 888999999999999999999864
No 80
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.6e-41 Score=349.96 Aligned_cols=234 Identities=24% Similarity=0.277 Sum_probs=194.2
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC------C
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE------K 386 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 386 (560)
.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 367999999999999999999754 688999999976544445566788999999999999999999999654 4
Q ss_pred EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccc
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIA 466 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 466 (560)
..++||||+++ ++.+.+.. .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a 211 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 211 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEee
Confidence 57999999986 46666643 289999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc---------------------
Q 035761 467 RLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------- 525 (560)
Q Consensus 467 ~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------- 525 (560)
+..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...+..
T Consensus 212 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 212 RTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp -----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred eecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 876532 2334567999999999999999999999999999999999999999754310
Q ss_pred --------------------------------------ccccccccccccccCCCCCCChhHHHhhceee
Q 035761 526 --------------------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 526 --------------------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
...+.+.++.|...||..||+++++++|+|+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~ 360 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence 11234566778899999999999999999985
No 81
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8.9e-41 Score=327.41 Aligned_cols=238 Identities=22% Similarity=0.367 Sum_probs=207.0
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|.+.+.||+|+||.||+|... +++.||+|.+.... ......+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 57889999999999999999875 57899999987543 22344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++++|.+++.... .+++.++..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp ECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 9999999999987543 389999999999999999999999 9999999999999999999999999999887544
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIKL 535 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~~ 535 (560)
........|++.|+|||++.+..++.++||||+|+++|||++|+.||..... ....+.+.++.
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 248 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 248 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHH
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHHH
Confidence 4445556789999999999999999999999999999999999999975431 12234566778
Q ss_pred ccccCCCCCCChhHHHhhceeee
Q 035761 536 IDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 536 ~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
|...||..||+++++++|.|+..
T Consensus 249 ~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 249 MLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp HTCSSGGGSCCGGGGGGSHHHHT
T ss_pred HcccChhhCcCHHHHhhChheec
Confidence 88899999999999999998753
No 82
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=340.22 Aligned_cols=233 Identities=22% Similarity=0.302 Sum_probs=194.7
Q ss_pred cccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEeccC
Q 035761 318 DIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYME 396 (560)
Q Consensus 318 ~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 396 (560)
...+.||+|+||.||+|.. .+|+.||+|+++.... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 3356799999999999986 4689999999876432 334678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe--CCCCcEEEeeeccccccCCCCC
Q 035761 397 MGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL--NSEFEAFVADFGIARLLNYDSS 474 (560)
Q Consensus 397 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfg~~~~~~~~~~ 474 (560)
+|+|.+++.... ..+++.++..++.||++||+|||+. +|+||||||+|||+ +.++.+||+|||+++......
T Consensus 170 ~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~- 243 (373)
T 2x4f_A 170 GGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE- 243 (373)
T ss_dssp TCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-
T ss_pred CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-
Confidence 999999887543 2389999999999999999999999 99999999999999 667899999999998765332
Q ss_pred CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------ccccccccc
Q 035761 475 NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSSLDKNI 533 (560)
Q Consensus 475 ~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~~~~~~ 533 (560)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+.+.+
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 323 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFI 323 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHH
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHH
Confidence 23345699999999999999999999999999999999999999964432 122345667
Q ss_pred ccccccCCCCCCChhHHHhhceeee
Q 035761 534 KLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+.|...||..||+++++++|+|+..
T Consensus 324 ~~~L~~dp~~Rps~~e~l~hp~~~~ 348 (373)
T 2x4f_A 324 SKLLIKEKSWRISASEALKHPWLSD 348 (373)
T ss_dssp HTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred HHHcCCChhhCCCHHHHhcCcCcCC
Confidence 7888999999999999999999854
No 83
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.4e-41 Score=328.73 Aligned_cols=233 Identities=28% Similarity=0.367 Sum_probs=190.3
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57899999999999999999864 68999999985433 22344567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999997644 389999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc----------------------cccc
Q 035761 473 SSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS----------------------SSSL 529 (560)
Q Consensus 473 ~~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~----------------------~~~~ 529 (560)
... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ...+
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHH
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHH
Confidence 222 23356899999999999999999999999999999999999999754421 1223
Q ss_pred ccccccccccCCCCCCChhHHHhh
Q 035761 530 DKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 530 ~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+.+..|...||..||+..+.+.+
T Consensus 245 ~~li~~~l~~dp~~R~~~~~~l~~ 268 (294)
T 4eqm_A 245 SNVILRATEKDKANRYKTIQEMKD 268 (294)
T ss_dssp HHHHHHHSCSSGGGSCSSHHHHHH
T ss_pred HHHHHHHhcCCHhHccccHHHHHH
Confidence 445566667788888755444444
No 84
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.1e-41 Score=334.24 Aligned_cols=239 Identities=22% Similarity=0.365 Sum_probs=207.8
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
.++|.+.+.||+|+||.||++... +++.||+|++.... ......+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 367889999999999999999875 47899999987543 2234456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++++|.+++.... .+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 120 ~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 99999999999987543 389999999999999999999999 999999999999999999999999999988754
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
.........|++.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+.++
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 273 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHH
Confidence 44445556799999999999999999999999999999999999999975431 1223456677
Q ss_pred cccccCCCCCCChhHHHhhceeee
Q 035761 535 LIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.|...||..||+++++++|.|+..
T Consensus 274 ~~l~~dp~~Rps~~ell~~~~~~~ 297 (335)
T 2owb_A 274 KMLQTDPTARPTINELLNDEFFTS 297 (335)
T ss_dssp HHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred HHccCChhHCcCHHHHhcCccccC
Confidence 888999999999999999999864
No 85
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-41 Score=330.99 Aligned_cols=239 Identities=26% Similarity=0.335 Sum_probs=195.9
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhh---hhhhHHHHHHHHHHHhcc---CCCCcceeeeEEEeCC
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLET---ELASLESFQNEARLLSQI---RHRNIVKLYGFCLHEK 386 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~ 386 (560)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .......+.+|+++++.+ +||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56899999999999999999986 4689999999874331 111123556777777766 4999999999998765
Q ss_pred -----EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEe
Q 035761 387 -----CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVA 461 (560)
Q Consensus 387 -----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 461 (560)
..++||||+. |+|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5799999997 599999986543 3389999999999999999999999 99999999999999999999999
Q ss_pred eeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc----------------
Q 035761 462 DFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS---------------- 525 (560)
Q Consensus 462 Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~---------------- 525 (560)
|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 163 Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 163 DFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241 (308)
T ss_dssp SCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 99999876432 2334457899999999999999999999999999999999999999643321
Q ss_pred ----------------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ----------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ----------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||++.++++|+|+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~ 302 (308)
T 3g33_A 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302 (308)
T ss_dssp TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence 112234667788999999999999999999875
No 86
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.2e-41 Score=327.39 Aligned_cols=239 Identities=26% Similarity=0.363 Sum_probs=197.8
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|.+.+.||+|+||.||+|... ++..||+|++..... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 56899999999999999999864 588999999876442 2345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCC-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe---CCCCcEEEeeecccccc
Q 035761 394 YMEMGSLFCILRTDE-EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL---NSEFEAFVADFGIARLL 469 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~ 469 (560)
|+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 999999999886431 123489999999999999999999999 99999999999999 45678999999999876
Q ss_pred CCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------ccccc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSSSL 529 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~~~ 529 (560)
... .......|++.|+|||++. ..++.++||||+|+++|||++|+.||..... ....+
T Consensus 178 ~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (285)
T 3is5_A 178 KSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQA 255 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHH
T ss_pred CCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHH
Confidence 432 2234456899999999876 5688999999999999999999999975431 12234
Q ss_pred ccccccccccCCCCCCChhHHHhhceeeec
Q 035761 530 DKNIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 530 ~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
.+.++.|...||+.||+++++++|+|+..|
T Consensus 256 ~~li~~~L~~dP~~Rps~~e~l~hp~f~~a 285 (285)
T 3is5_A 256 VDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285 (285)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHHTSGGGGC-
T ss_pred HHHHHHHccCChhhCcCHHHHhcCHHhhcC
Confidence 466778889999999999999999999865
No 87
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.7e-41 Score=342.72 Aligned_cols=236 Identities=23% Similarity=0.371 Sum_probs=198.0
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC--CCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIR--HRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|+.+++.++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458999999999999999999888999999999765544455678999999999996 599999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+...
T Consensus 136 E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp E-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred e-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 9 56889999998654 389999999999999999999999 999999999999996 589999999999876533
Q ss_pred CC--CceeeccccCccCcccccc-----------CccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------
Q 035761 473 SS--NRTLLAGTYGSIAPELAYT-----------MVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------- 524 (560)
Q Consensus 473 ~~--~~~~~~g~~~~~aPE~~~~-----------~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------- 524 (560)
.. .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI 287 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC
Confidence 22 1234579999999999875 3688899999999999999999999975321
Q ss_pred -----cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -----SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -----~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||++.++++|+|+..
T Consensus 288 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~ 326 (390)
T 2zmd_A 288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326 (390)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence 1123456677788999999999999999999853
No 88
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.1e-41 Score=329.95 Aligned_cols=240 Identities=25% Similarity=0.333 Sum_probs=199.9
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|++.+.||+|+||.||+|..+ +|+.||||++..........+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999875 68999999987654333344678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|++ |+|.+++..... ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp CCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred ccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 998 599999876532 2389999999999999999999999 99999999999999999999999999998765433
Q ss_pred CCceeeccccCccCccccccCc-cCcchhHHHHHHHHHHHHhCCCCCCccccc---------------------------
Q 035761 474 SNRTLLAGTYGSIAPELAYTMV-VTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------------- 525 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~-~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------------- 525 (560)
.......+++.|+|||.+.+.. ++.++||||||+++|||++|+.||......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCccc
Confidence 3334456899999999988765 788999999999999999999999754321
Q ss_pred -------------------ccccccccccccccCCCCCCChhHHHhhceeeec
Q 035761 526 -------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 526 -------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
...+.+.++.|...||..||++.++++|+|+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~ 290 (299)
T 2r3i_A 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290 (299)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcC
Confidence 1123446677888999999999999999998753
No 89
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.1e-40 Score=323.94 Aligned_cols=235 Identities=21% Similarity=0.302 Sum_probs=202.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|... ++..||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 456899999999999999999875 467899999875432 33567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe---CCCCcEEEeeecccccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL---NSEFEAFVADFGIARLL 469 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~ 469 (560)
||+++++|.+++..... +++.++..++.|++.||+|||+. +++||||||+||++ +.++.++|+|||++...
T Consensus 86 e~~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 86 ELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp ECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred eccCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 99999999999876433 89999999999999999999999 99999999999999 78899999999999876
Q ss_pred CCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cccc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSS 528 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~ 528 (560)
... .......||+.|+|||++.+. ++.++||||+|+++|||++|+.||..... ....
T Consensus 160 ~~~-~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (277)
T 3f3z_A 160 KPG-KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQ 237 (277)
T ss_dssp CTT-SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHH
T ss_pred cCc-cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHH
Confidence 533 233445689999999988765 89999999999999999999999975432 1234
Q ss_pred cccccccccccCCCCCCChhHHHhhceeee
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+...++.|...||..||++.++++|+|+..
T Consensus 238 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 267 (277)
T 3f3z_A 238 AESLIRRLLTKSPKQRITSLQALEHEWFEK 267 (277)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 556778888999999999999999999864
No 90
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.8e-41 Score=337.15 Aligned_cols=246 Identities=26% Similarity=0.302 Sum_probs=201.6
Q ss_pred HHHHhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhh---hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC
Q 035761 310 MIEATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLET---ELASLESFQNEARLLSQIRHRNIVKLYGFCLHE 385 (560)
Q Consensus 310 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 385 (560)
+....++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+++++.++||||+++++++.++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345567899999999999999999986 4678999999875432 234456789999999999999999999999999
Q ss_pred CEEEEEEeccCCCCHHHHhhcCC-------------------------------------cccCCCHHHHHHHHHHHHHH
Q 035761 386 KCMFLIYEYMEMGSLFCILRTDE-------------------------------------EAVGLDWTKRVNIVKGMAHA 428 (560)
Q Consensus 386 ~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~ia~~ 428 (560)
+..++||||+++|+|.+++.... ....+++..+..++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999985210 01124677888999999999
Q ss_pred HHHHHhcCCCCeEEeCCCCCCeEeCCCC--cEEEeeeccccccCCCCC----CceeeccccCccCcccccc--CccCcch
Q 035761 429 LSYLHHHCTPPILHRDISSNNILLNSEF--EAFVADFGIARLLNYDSS----NRTLLAGTYGSIAPELAYT--MVVTEKY 500 (560)
Q Consensus 429 l~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~~~~~~~~~~----~~~~~~g~~~~~aPE~~~~--~~~~~~~ 500 (560)
|+|||+. +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999987643221 1234568999999999875 6788999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcccc---------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 501 DVYSFGVVALEVLMGKHPGELLSS---------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 501 Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
||||||+++|||++|+.||..... ....+.+.++.|...||..||++.++++|+|+..
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~ 336 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence 999999999999999999964332 1234566778888999999999999999999854
No 91
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.3e-41 Score=341.56 Aligned_cols=232 Identities=22% Similarity=0.306 Sum_probs=188.6
Q ss_pred cCCccc-ceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhc-cCCCCcceeeeEEEe----CCE
Q 035761 315 EDFDIK-YCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQ-IRHRNIVKLYGFCLH----EKC 387 (560)
Q Consensus 315 ~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~----~~~ 387 (560)
++|.+. +.||+|+||.||+|..+ +++.||||++... ..+.+|++++.+ .+||||+++++++.. .+.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 456665 68999999999999865 6889999998642 245678888744 589999999999876 567
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC---CCcEEEeeec
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS---EFEAFVADFG 464 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg 464 (560)
.++||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 899999999999999998643 23489999999999999999999999 9999999999999997 7899999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------- 524 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------- 524 (560)
+++..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~ 288 (400)
T 1nxk_A 210 FAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288 (400)
T ss_dssp TCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCT
T ss_pred cccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCC
Confidence 99876432 223445789999999999999999999999999999999999999964332
Q ss_pred -----cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -----SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -----~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 289 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 327 (400)
T 1nxk_A 289 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327 (400)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence 1223455677888899999999999999999864
No 92
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.8e-40 Score=324.63 Aligned_cols=237 Identities=23% Similarity=0.330 Sum_probs=199.4
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe----CCEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH----EKCMF 389 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 389 (560)
..|.+.+.||+|+||.||+|... ++..||+|.+..........+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34777889999999999999864 57899999987655444556788999999999999999999999876 35689
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeCCCCCCeEeC-CCCcEEEeeeccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPP--ILHRDISSNNILLN-SEFEAFVADFGIA 466 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfg~~ 466 (560)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. + ++||||||+||+++ .++.+||+|||++
T Consensus 106 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 9999999999999997643 389999999999999999999998 7 99999999999998 7899999999999
Q ss_pred cccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------cc
Q 035761 467 RLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SS 526 (560)
Q Consensus 467 ~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~ 526 (560)
..... .......|++.|+|||++.+ .++.++||||+|+++|||++|+.||..... ..
T Consensus 180 ~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (290)
T 1t4h_A 180 TLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI 256 (290)
T ss_dssp GGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCC
T ss_pred ccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCC
Confidence 76432 33445578999999998764 589999999999999999999999975332 11
Q ss_pred cccccccccccccCCCCCCChhHHHhhceeeecC
Q 035761 527 SSLDKNIKLIDLLDPRLPPPGDQMIRQGIILIST 560 (560)
Q Consensus 527 ~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~~ 560 (560)
..+.+.++.|...||..||+++++++|+|+...|
T Consensus 257 ~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~~ 290 (290)
T 1t4h_A 257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEET 290 (290)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC---
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhhCcccccCC
Confidence 2345667788899999999999999999998754
No 93
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.1e-41 Score=336.32 Aligned_cols=234 Identities=27% Similarity=0.391 Sum_probs=199.9
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
+.|+..+.||+|+||.||+|+. .+++.||||++.... ......+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588899999999999999986 578999999987543 22344567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||++ |++.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp ECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred ecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 9997 68888876432 2389999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCceeeccccCccCccccc---cCccCcchhHHHHHHHHHHHHhCCCCCCcccc-------------------cccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAY---TMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------SSSSLD 530 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~---~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------~~~~~~ 530 (560)
....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ....+.
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFR 283 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHH
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Confidence 2346899999999884 56789999999999999999999999864331 122345
Q ss_pred cccccccccCCCCCCChhHHHhhceeee
Q 035761 531 KNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 531 ~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+.+..|...||..||+++++++|+|+..
T Consensus 284 ~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 284 NFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred HHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 6677888999999999999999999864
No 94
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.2e-41 Score=340.05 Aligned_cols=237 Identities=23% Similarity=0.291 Sum_probs=193.3
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHH-HhccCCCCcceeeeEEEeCCEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARL-LSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
++|++.+.||+|+||.||+|+.+ +++.||+|++++... .......+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56899999999999999999875 578999999976542 22233456667776 5678999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 118 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999999997643 389999999999999999999999 999999999999999999999999999987544
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ....+...++
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~ 271 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLE 271 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHHH
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Confidence 44445556899999999999999999999999999999999999999965432 1223445567
Q ss_pred cccccCCCCCCCh----hHHHhhceee
Q 035761 535 LIDLLDPRLPPPG----DQMIRQGIIL 557 (560)
Q Consensus 535 ~~~~~dp~~~p~~----~~~~~~~~~~ 557 (560)
.|...||..||.+ .++..|.|+.
T Consensus 272 ~lL~~dp~~R~~~~~~~~~i~~h~~f~ 298 (373)
T 2r5t_A 272 GLLQKDRTKRLGAKDDFMEIKSHVFFS 298 (373)
T ss_dssp HHTCSSGGGSTTTTTTHHHHHTSGGGT
T ss_pred HHcccCHHhCCCCCCCHHHHhCCcccc
Confidence 7778899999886 5888888864
No 95
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.3e-40 Score=323.03 Aligned_cols=239 Identities=27% Similarity=0.382 Sum_probs=204.1
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 467899999999999999999875 689999999875432 234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++++|.+++.... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 85 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp ECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999997543 389999999999999999999999 9999999999999999999999999999865432
Q ss_pred C--CCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCccccc--------------------cccc
Q 035761 473 S--SNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------SSSL 529 (560)
Q Consensus 473 ~--~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------~~~~ 529 (560)
. .......|++.|+|||++.+..+ +.++||||||+++|||++|+.||...... ...+
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP 238 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHH
Confidence 2 12234568999999999987765 67899999999999999999999754321 1223
Q ss_pred ccccccccccCCCCCCChhHHHhhceeeec
Q 035761 530 DKNIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 530 ~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
.+.++.|...||..||+++++++|+|+..+
T Consensus 239 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (276)
T 2yex_A 239 LALLHKILVENPSARITIPDIKKDRWYNKP 268 (276)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence 456677888999999999999999998764
No 96
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.4e-40 Score=326.40 Aligned_cols=246 Identities=30% Similarity=0.489 Sum_probs=207.4
Q ss_pred CCcCHHHHHHHhcCCccc------ceeeccCCeeEEEEEeCCCcEEEEEEccchh--hhhhhHHHHHHHHHHHhccCCCC
Q 035761 303 GRITFQDMIEATEDFDIK------YCIGTGGYGSVYRARLPSGKVVALKKLHRLE--TELASLESFQNEARLLSQIRHRN 374 (560)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~n 374 (560)
..+++.++..++++|... +.||+|+||.||+|.. +++.||||++.... ......+.+.+|+.+++.++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 356889999999998877 8899999999999987 58899999987543 22334567899999999999999
Q ss_pred cceeeeEEEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC
Q 035761 375 IVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS 454 (560)
Q Consensus 375 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~ 454 (560)
|+++++++.+.+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +++||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997654445599999999999999999999999 9999999999999999
Q ss_pred CCcEEEeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccccc------
Q 035761 455 EFEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS------ 526 (560)
Q Consensus 455 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~------ 526 (560)
++.+||+|||+++........ .....|++.|+|||.+.+ .++.++||||||+++|||++|+.||.......
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876432222 223468999999998765 57899999999999999999999997543221
Q ss_pred --------------------------cccccccccccccCCCCCCChhHHHhh
Q 035761 527 --------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 527 --------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
..+.+.+..|...||..||++++++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 112345667788899999999998875
No 97
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.3e-41 Score=325.70 Aligned_cols=236 Identities=22% Similarity=0.355 Sum_probs=181.1
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5789999999999999999985 468999999987543 22334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+ ++++.+++..... +++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++......
T Consensus 93 e~~-~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHTSSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hhc-CCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999 6788888876433 89999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
.......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||..... ....+.+.++
T Consensus 166 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 244 (275)
T 2eue_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIK 244 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred -ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence 22334568999999999988765 6899999999999999999999975432 1223456778
Q ss_pred cccccCCCCCCChhHHHhhceeee
Q 035761 535 LIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.|...||..||+++++++|+|+..
T Consensus 245 ~~l~~dP~~Rps~~e~l~h~~f~~ 268 (275)
T 2eue_A 245 RMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp HHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred HHhhcCHhHCCCHHHHhhCCeecc
Confidence 888999999999999999999864
No 98
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=332.00 Aligned_cols=233 Identities=30% Similarity=0.399 Sum_probs=194.8
Q ss_pred cCCcccceeeccCCeeEEEEEeC----CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (560)
++|++.+.||+|+||.||+|.+. .+..||||+++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 56888999999999999999874 345699999975432 2345678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+++|+|.++++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 128 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999975432 389999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCc---eeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------cccc
Q 035761 471 YDSSNR---TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSS 528 (560)
Q Consensus 471 ~~~~~~---~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~ 528 (560)
...... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHA 282 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHH
Confidence 432222 22345778999999999999999999999999999999 9999964432 1223
Q ss_pred cccccccccccCCCCCCChhHHHhh
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.+.+..|...||..||++.++++.
T Consensus 283 l~~li~~~l~~dp~~Rps~~eil~~ 307 (325)
T 3kul_A 283 LHQLMLDCWHKDRAQRPRFSQIVSV 307 (325)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHH
Confidence 4566777888899999999988764
No 99
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=7.6e-41 Score=332.83 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=207.9
Q ss_pred CcCHHHHHHHhcCCccc-ceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeee
Q 035761 304 RITFQDMIEATEDFDIK-YCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYG 380 (560)
Q Consensus 304 ~~~~~~~~~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~ 380 (560)
.+.++......++|.+. +.||+|+||.||+|... +++.||+|++............+.+|+.+++.+ +||||+++++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 34455556667778877 88999999999999865 589999999986554444566888999999999 5699999999
Q ss_pred EEEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC---CCc
Q 035761 381 FCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS---EFE 457 (560)
Q Consensus 381 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~ 457 (560)
++...+..++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999999986532 23489999999999999999999999 9999999999999998 789
Q ss_pred EEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-------------
Q 035761 458 AFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------- 524 (560)
Q Consensus 458 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------- 524 (560)
+||+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||.....
T Consensus 173 ~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~ 251 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD 251 (327)
T ss_dssp EEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred EEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccc
Confidence 9999999998765332 23345699999999999999999999999999999999999999964432
Q ss_pred --------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 --------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 --------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 252 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~ 293 (327)
T 3lm5_A 252 YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293 (327)
T ss_dssp CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence 1122455667788899999999999999999864
No 100
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.5e-41 Score=349.11 Aligned_cols=237 Identities=26% Similarity=0.346 Sum_probs=185.8
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC-----CEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE-----KCM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 388 (560)
++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+++++.++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 67999999999999999999764 689999999876544445567789999999999999999999998543 568
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
++||||+. |+|.+++.... .+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++.
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEeccc-cchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchh
Confidence 99999985 69999987643 399999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC---------------------------CceeeccccCccCcccc-ccCccCcchhHHHHHHHHHHHHh------
Q 035761 469 LNYDSS---------------------------NRTLLAGTYGSIAPELA-YTMVVTEKYDVYSFGVVALEVLM------ 514 (560)
Q Consensus 469 ~~~~~~---------------------------~~~~~~g~~~~~aPE~~-~~~~~~~~~Dv~s~G~il~el~~------ 514 (560)
...... .....+||+.|+|||++ ....++.++|||||||++|||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~ 285 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence 643211 12335689999999976 56679999999999999999999
Q ss_pred -----CCCCCCcccc-----------------------------------------------------------------
Q 035761 515 -----GKHPGELLSS----------------------------------------------------------------- 524 (560)
Q Consensus 515 -----g~~P~~~~~~----------------------------------------------------------------- 524 (560)
|++||...+.
T Consensus 286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (458)
T 3rp9_A 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER 365 (458)
T ss_dssp SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence 6666643220
Q ss_pred ---cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 ---SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 ---~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+..+++.|...||..||+++++++|+|+..
T Consensus 366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~ 402 (458)
T 3rp9_A 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402 (458)
T ss_dssp STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred CCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhh
Confidence 0223345677888999999999999999999853
No 101
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9.1e-41 Score=322.75 Aligned_cols=232 Identities=25% Similarity=0.411 Sum_probs=199.5
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
.++|++.+.||+|+||.||+|+.+++..||||+++.... ..+.+.+|++++++++||||+++++++..+...++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 357889999999999999999998888999999976442 23568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp CCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred ccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 999999999997643 2389999999999999999999999 99999999999999999999999999998764332
Q ss_pred CC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------ccccccccc
Q 035761 474 SN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSSLDKNI 533 (560)
Q Consensus 474 ~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~~~~~~ 533 (560)
.. .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ....+.+.+
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 238 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIM 238 (268)
T ss_dssp EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHH
Confidence 21 122345678999999999999999999999999999999 9999974432 122355677
Q ss_pred ccccccCCCCCCChhHHHhh
Q 035761 534 KLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.|...||..||++++++++
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 239 YSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHTTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCChhhCcCHHHHHHH
Confidence 78888999999999999876
No 102
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1e-40 Score=325.86 Aligned_cols=239 Identities=17% Similarity=0.265 Sum_probs=199.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 391 (560)
.++|++.+.||+|+||.||+|... +++.||+|++............+.+|+..+..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467999999999999999999875 789999999876544334456788999999999 999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC---------------
Q 035761 392 YEYMEMGSLFCILRTDEE-AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE--------------- 455 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~--------------- 455 (560)
|||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999976422 13489999999999999999999999 99999999999999844
Q ss_pred ----CcEEEeeeccccccCCCCCCceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCccc-------
Q 035761 456 ----FEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLS------- 523 (560)
Q Consensus 456 ----~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~------- 523 (560)
..+||+|||.+....... ...|++.|+|||++.+. .++.++||||||+++|||++|.+|+....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~ 242 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQ 242 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHT
T ss_pred cCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHc
Confidence 479999999998765322 23589999999998876 56679999999999999999998764322
Q ss_pred --------ccccccccccccccccCCCCCCChhHHHhhceeeec
Q 035761 524 --------SSSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 524 --------~~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
.....+.+.++.|...||..||++.++++|+|+..+
T Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 243 GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 123345667788889999999999999999999865
No 103
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3e-40 Score=333.27 Aligned_cols=244 Identities=26% Similarity=0.373 Sum_probs=206.2
Q ss_pred HHHHHHHhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh------hhhhHHHHHHHHHHHhcc-CCCCccee
Q 035761 307 FQDMIEATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET------ELASLESFQNEARLLSQI-RHRNIVKL 378 (560)
Q Consensus 307 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l-~h~niv~l 378 (560)
+.......++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.+++.+ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556678999999999999999999875 699999999865331 122345688999999999 89999999
Q ss_pred eeEEEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcE
Q 035761 379 YGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEA 458 (560)
Q Consensus 379 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 458 (560)
++++...+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 999999999999999999999999997543 389999999999999999999999 99999999999999999999
Q ss_pred EEeeeccccccCCCCCCceeeccccCccCcccccc------CccCcchhHHHHHHHHHHHHhCCCCCCcccc--------
Q 035761 459 FVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYT------MVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------- 524 (560)
Q Consensus 459 kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~------~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------- 524 (560)
||+|||++..+... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 240 kl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~ 318 (365)
T 2y7j_A 240 RLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318 (365)
T ss_dssp EECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred EEEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 99999999876533 23344579999999998863 3578899999999999999999999964321
Q ss_pred -------------cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 525 -------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 525 -------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
....+...++.|...||..||+++++++|+|+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 319 EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred hCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 112255667788899999999999999999974
No 104
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.6e-40 Score=341.31 Aligned_cols=239 Identities=24% Similarity=0.340 Sum_probs=191.5
Q ss_pred HHhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh------hhhhHHHHHHHHHHHhccCCCCcceeeeEEEe
Q 035761 312 EATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET------ELASLESFQNEARLLSQIRHRNIVKLYGFCLH 384 (560)
Q Consensus 312 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 384 (560)
...++|.+.+.||+|+||.||+|... +++.||||++..... .......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34578999999999999999999764 579999999875431 1112235789999999999999999999975
Q ss_pred CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC---CcEEEe
Q 035761 385 EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE---FEAFVA 461 (560)
Q Consensus 385 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~ 461 (560)
.+..++||||+++|+|.+++..... +++.++..++.|++.||+|||+. +|+||||||+|||++.+ ..+||+
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSCC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred cCceEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 4568999999999999999876543 89999999999999999999999 99999999999999754 459999
Q ss_pred eeccccccCCCCCCceeeccccCccCcccccc---CccCcchhHHHHHHHHHHHHhCCCCCCccccc-------------
Q 035761 462 DFGIARLLNYDSSNRTLLAGTYGSIAPELAYT---MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS------------- 525 (560)
Q Consensus 462 Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~---~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~------------- 525 (560)
|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~ 363 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC
Confidence 99999876532 23344579999999999863 56788999999999999999999999754321
Q ss_pred ---------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ---------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ---------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||+++++++|+|+..
T Consensus 364 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence 223445667788889999999999999999875
No 105
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.8e-41 Score=334.98 Aligned_cols=237 Identities=26% Similarity=0.357 Sum_probs=194.8
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC----EE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK----CM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 388 (560)
++|++.+.||+|+||.||+|+. .+++.||||+++... ........+.+|+.++++++||||+++++++.... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5799999999999999999986 568999999997643 22344567899999999999999999999987654 34
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
++||||+++|+|.++++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 99999999999999997643 389999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------
Q 035761 469 LNYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------- 524 (560)
Q Consensus 469 ~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------- 524 (560)
....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 245 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTT
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCC
Confidence 6433221 2234689999999999999999999999999999999999999975442
Q ss_pred cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 525 SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 525 ~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
....+...+..|...||..||+..+++++.|+.
T Consensus 246 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 246 LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 122345667778889999999999999998764
No 106
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.2e-40 Score=349.62 Aligned_cols=237 Identities=24% Similarity=0.384 Sum_probs=202.5
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|... +++.||||++............+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 457999999999999999999875 6899999999765543445677899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC---CCCcEEEeeecccccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN---SEFEAFVADFGIARLL 469 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~~ 469 (560)
||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||+++..
T Consensus 101 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9999999999887643 389999999999999999999999 999999999999995 4567999999999876
Q ss_pred CCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cccc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSS 528 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~ 528 (560)
... .......||+.|+|||++.+ .++.++||||+||++|||++|+.||..... .+..
T Consensus 175 ~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 252 (486)
T 3mwu_A 175 QQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252 (486)
T ss_dssp CCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHH
T ss_pred CCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHH
Confidence 533 22344579999999999876 589999999999999999999999964432 1223
Q ss_pred cccccccccccCCCCCCChhHHHhhceeee
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+...++.|...||..||++.++++|+|+..
T Consensus 253 ~~~li~~~L~~dp~~R~t~~~~l~hp~~~~ 282 (486)
T 3mwu_A 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQK 282 (486)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHCHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHhcCHhhcc
Confidence 456677888999999999999999999863
No 107
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.9e-40 Score=326.76 Aligned_cols=233 Identities=25% Similarity=0.404 Sum_probs=192.6
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEec
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEY 394 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (560)
++|.+.+.||+|+||.||+|... ..+|+|.++.........+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 67899999999999999999864 36899988765544555678999999999999999999999875 4557899999
Q ss_pred cCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC--
Q 035761 395 MEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD-- 472 (560)
Q Consensus 395 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~-- 472 (560)
+++|+|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 113 CEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred CCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999975432 389999999999999999999999 9999999999999999999999999999865421
Q ss_pred CCCceeeccccCccCccccc---cCccCcchhHHHHHHHHHHHHhCCCCCCccccc-----------------------c
Q 035761 473 SSNRTLLAGTYGSIAPELAY---TMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS-----------------------S 526 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~---~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~-----------------------~ 526 (560)
........||+.|+|||++. +..++.++||||||+++|||++|+.||...... .
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCP 267 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSC
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCc
Confidence 12233456899999999986 566888999999999999999999999754321 1
Q ss_pred cccccccccccccCCCCCCChhHHHhhce
Q 035761 527 SSLDKNIKLIDLLDPRLPPPGDQMIRQGI 555 (560)
Q Consensus 527 ~~~~~~~~~~~~~dp~~~p~~~~~~~~~~ 555 (560)
..+.+.+..|...||..||++.+++++..
T Consensus 268 ~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 268 KAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp HHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 23455667788889999999999988743
No 108
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1e-40 Score=335.52 Aligned_cols=238 Identities=22% Similarity=0.327 Sum_probs=199.1
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC--------
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE-------- 385 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 385 (560)
++|++.+.||+|+||.||+|+. .+|+.||||++............+.+|+++++.++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5799999999999999999987 5689999999876554334445678999999999999999999999873
Q ss_pred CEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecc
Q 035761 386 KCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGI 465 (560)
Q Consensus 386 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 465 (560)
+..++||||+++ ++.+.+..... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 468999999985 77777765432 389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC----CCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCccccc---------------
Q 035761 466 ARLLNYDS----SNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------- 525 (560)
Q Consensus 466 ~~~~~~~~----~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------- 525 (560)
++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 98764221 22234568999999998876 45799999999999999999999999754311
Q ss_pred ----------------------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ----------------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ----------------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+..+.+.++.|...||..||+++++++|+|+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 317 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence 112345667788999999999999999999864
No 109
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-40 Score=334.61 Aligned_cols=240 Identities=25% Similarity=0.313 Sum_probs=196.3
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhh---hhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETEL---ASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
..++|++.+.||+|+||.||+|... +|+.||||++....... ...+.+.+|+++++.++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3567999999999999999999875 58999999987543211 1124678999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
++||||+++ +|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred EEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 999999986 8888887543 3488999999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCCCceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCccccc----------------------
Q 035761 469 LNYDSSNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLSSS---------------------- 525 (560)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~---------------------- 525 (560)
............||+.|+|||++.+. .++.++|||||||++|||++|..||......
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhc
Confidence 75544444556789999999998764 4788999999999999999999998643310
Q ss_pred -----------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 -----------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 -----------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||+++++++|+|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~ 297 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence 122344667788899999999999999999864
No 110
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2e-40 Score=323.14 Aligned_cols=236 Identities=27% Similarity=0.427 Sum_probs=204.1
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56889999999999999999875 578899999875432 2233467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~- 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS- 166 (284)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS-
T ss_pred EeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc-
Confidence 9999999999997643 389999999999999999999999 999999999999999999999999999976542
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIKL 535 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~~ 535 (560)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+.++.
T Consensus 167 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 245 (284)
T 2vgo_A 167 -LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISK 245 (284)
T ss_dssp -SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHH
T ss_pred -cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHHH
Confidence 223345689999999999999999999999999999999999999975432 12334566777
Q ss_pred ccccCCCCCCChhHHHhhceeee
Q 035761 536 IDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 536 ~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
|...||..||+++++++|+|+..
T Consensus 246 ~l~~~p~~Rps~~~ll~h~~~~~ 268 (284)
T 2vgo_A 246 LLRYHPPQRLPLKGVMEHPWVKA 268 (284)
T ss_dssp HSCSSGGGSCCHHHHHTCHHHHH
T ss_pred HhhcCHhhCCCHHHHhhCHHHHh
Confidence 88899999999999999999864
No 111
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.7e-41 Score=341.62 Aligned_cols=234 Identities=26% Similarity=0.387 Sum_probs=195.9
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|.+.+.||+|+||.||+|.+. +++.||||.++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC-HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 457888999999999999999886 689999999875432 233456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.++++... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 192 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred EcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 9999999999997543 2389999999999999999999999 9999999999999999999999999999865322
Q ss_pred CCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------cccccc
Q 035761 473 SSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSSLDK 531 (560)
Q Consensus 473 ~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~~~~ 531 (560)
... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ...+.+
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFR 346 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 111 111235778999999999999999999999999999998 99999754321 123445
Q ss_pred ccccccccCCCCCCChhHHHhh
Q 035761 532 NIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 532 ~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.++.|...||..||+++++++.
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~ 368 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQE 368 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHH
Confidence 6677778889999998888764
No 112
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=335.87 Aligned_cols=234 Identities=25% Similarity=0.308 Sum_probs=193.1
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC------
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK------ 386 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 386 (560)
.++|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35789999999999999999986 46899999999765444445567889999999999999999999997653
Q ss_pred EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccc
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIA 466 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 466 (560)
..++||||+ +++|.+++... .+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 459999999 78999999753 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------------
Q 035761 467 RLLNYDSSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS-------------------- 525 (560)
Q Consensus 467 ~~~~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~-------------------- 525 (560)
+.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..
T Consensus 176 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 176 RQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp EECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred ccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 87543 2334568999999999887 67899999999999999999999999754320
Q ss_pred ----------------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ----------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ----------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+...++.|...||..||+++++++|+|+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~ 313 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence 112334556778889999999999999999853
No 113
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.9e-41 Score=323.76 Aligned_cols=231 Identities=28% Similarity=0.398 Sum_probs=198.2
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEec
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEY 394 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (560)
++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 56888999999999999999998899999999975432 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC-
Q 035761 395 MEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS- 473 (560)
Q Consensus 395 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~- 473 (560)
+++|+|.+++..... .+++.++..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp CTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 999999999976433 389999999999999999999999 99999999999999999999999999998654321
Q ss_pred CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------cccccccccc
Q 035761 474 SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSSLDKNIK 534 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~~~~~~~ 534 (560)
.......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ....+.+.++
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 241 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN 241 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHH
Confidence 11222346778999999999999999999999999999999 9999975432 1223445667
Q ss_pred cccccCCCCCCChhHHHhh
Q 035761 535 LIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~ 553 (560)
.|...||..||++.+++++
T Consensus 242 ~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHccCCcccCcCHHHHHHH
Confidence 7888899999999999876
No 114
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.5e-40 Score=322.33 Aligned_cols=237 Identities=25% Similarity=0.343 Sum_probs=201.0
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhh----hhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETE----LASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
++|++.+.||+|+||.||+|... +++.||+|.++..... ....+.+.+|+.++++++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56889999999999999999876 6899999998754321 113567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC----cEEEeeecc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF----EAFVADFGI 465 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~ 465 (560)
+||||+++++|.+++.... .+++.++..++.||+.||+|||+. +++||||||+||+++.++ .+||+|||+
T Consensus 85 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 9999999999999997543 389999999999999999999999 999999999999998877 799999999
Q ss_pred ccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------
Q 035761 466 ARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------- 524 (560)
Q Consensus 466 ~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------- 524 (560)
+....... ......|++.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 237 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred ceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhccc
Confidence 98764322 22344689999999999999999999999999999999999999975432
Q ss_pred cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 ~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||++.++++|+|+..
T Consensus 238 ~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 271 (283)
T 3bhy_A 238 TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 271 (283)
T ss_dssp CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence 1223456677888899999999999999999753
No 115
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.8e-40 Score=328.74 Aligned_cols=236 Identities=21% Similarity=0.307 Sum_probs=194.1
Q ss_pred cCCccc-ceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEEE
Q 035761 315 EDFDIK-YCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 315 ~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 391 (560)
+.|++. +.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.++ +||||+++++++.+++..++|
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 457774 77999999999999854 68999999997543 23345788999999985 799999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc---EEEeeeccccc
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE---AFVADFGIARL 468 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~~ 468 (560)
|||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 90 FEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999997643 389999999999999999999999 9999999999999998776 99999999986
Q ss_pred cCCCCC-------CceeeccccCccCcccccc-----CccCcchhHHHHHHHHHHHHhCCCCCCcccc------------
Q 035761 469 LNYDSS-------NRTLLAGTYGSIAPELAYT-----MVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------ 524 (560)
Q Consensus 469 ~~~~~~-------~~~~~~g~~~~~aPE~~~~-----~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------ 524 (560)
...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 542211 1123458999999999875 5688999999999999999999999975421
Q ss_pred ------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 ------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 ------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 301 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-
T ss_pred hHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcC
Confidence 1123456667788899999999999999999874
No 116
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.1e-40 Score=331.07 Aligned_cols=232 Identities=25% Similarity=0.339 Sum_probs=190.8
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC----EEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK----CMF 389 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~ 389 (560)
.++|++.+.||+|+||.||+|++. ++.||||++..... ....+.+|+.++++++||||+++++++.... ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK---QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch---HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 367999999999999999999885 78999999975432 2234556889999999999999999998754 479
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcC-------CCCeEEeCCCCCCeEeCCCCcEEEee
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHC-------TPPILHRDISSNNILLNSEFEAFVAD 462 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------~~~ivH~dlk~~Nill~~~~~~kl~D 462 (560)
+||||+++|+|.++++... +++.++..++.|++.||+|||+.. .++|+||||||+||+++.++.+||+|
T Consensus 99 lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEEECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEEecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999997643 899999999999999999999751 33899999999999999999999999
Q ss_pred eccccccCCCCCC--ceeeccccCccCcccccc-----CccCcchhHHHHHHHHHHHHhCCCCCCcccccc---------
Q 035761 463 FGIARLLNYDSSN--RTLLAGTYGSIAPELAYT-----MVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS--------- 526 (560)
Q Consensus 463 fg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~-----~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~--------- 526 (560)
||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543322 223568999999999886 456678999999999999999999996432110
Q ss_pred -------------------------------cccccccccccccCCCCCCChhHHHhh
Q 035761 527 -------------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 527 -------------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
..+.+.++.|...||..||+++++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 312 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGER 312 (322)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 014455677888899999999988865
No 117
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.1e-41 Score=326.49 Aligned_cols=243 Identities=28% Similarity=0.444 Sum_probs=204.0
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe--CCEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH--EKCMFL 390 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 390 (560)
.++|++.+.||+|+||.||+|... +++.||+|.+..........+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357899999999999999999875 68999999997655444556789999999999999999999998854 568999
Q ss_pred EEeccCCCCHHHHhhcCCc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEEeCCCCCCeEeCCCCcEEEeeec
Q 035761 391 IYEYMEMGSLFCILRTDEE-AVGLDWTKRVNIVKGMAHALSYLHHHCTPP-----ILHRDISSNNILLNSEFEAFVADFG 464 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Dfg 464 (560)
||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. + ++||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999975322 23489999999999999999999998 7 9999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc------------------cc
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------------SS 526 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------------~~ 526 (560)
+++.............|++.|+|||++.+..++.++||||||+++|||++|+.||..... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 241 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSC
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccC
Confidence 998765433323345689999999999998999999999999999999999999975432 12
Q ss_pred cccccccccccccCCCCCCChhHHHhhceeeec
Q 035761 527 SSLDKNIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 527 ~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
..+.+.++.|...||..||++++++++.|..-+
T Consensus 242 ~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 242 DELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 345667788889999999999999999987643
No 118
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.7e-40 Score=325.49 Aligned_cols=236 Identities=31% Similarity=0.454 Sum_probs=206.0
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
+.|+..+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.+++.++||||+++++++..+...++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 5688899999999999999976 4689999999875432 2345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++++|.+++... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 101 YLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred eCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 99999999999753 389999999999999999999999 99999999999999999999999999998775544
Q ss_pred CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc------------------ccccccccccc
Q 035761 474 SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------------SSSSLDKNIKL 535 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------------~~~~~~~~~~~ 535 (560)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ....+...++.
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHH
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHH
Confidence 444556789999999999999999999999999999999999999975432 12234566678
Q ss_pred ccccCCCCCCChhHHHhhceeee
Q 035761 536 IDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 536 ~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
|...||..||++++++++.|+..
T Consensus 254 ~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp HCCSSGGGSCCHHHHTTCHHHHH
T ss_pred HcCCChhhCcCHHHHhhChhhhc
Confidence 88999999999999999999854
No 119
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.3e-40 Score=358.52 Aligned_cols=239 Identities=22% Similarity=0.285 Sum_probs=206.9
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchh-hhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLE-TELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 389 (560)
..++|++.+.||+|+||.||+|+.+ +++.||||+++... ......+.+..|..++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467999999999999999999865 57899999997643 2234456778899999988 7999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++|+|.+++...+. +++.++..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++..
T Consensus 419 lV~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999986543 99999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKN 532 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~ 532 (560)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ....+..+
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 572 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 572 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHH
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHH
Confidence 4444455567899999999999999999999999999999999999999975432 12334566
Q ss_pred cccccccCCCCCCCh-----hHHHhhceee
Q 035761 533 IKLIDLLDPRLPPPG-----DQMIRQGIIL 557 (560)
Q Consensus 533 ~~~~~~~dp~~~p~~-----~~~~~~~~~~ 557 (560)
++.+...||..|+.+ +++++|+|+.
T Consensus 573 i~~lL~~dP~~R~~~~~~~~~ei~~h~ff~ 602 (674)
T 3pfq_A 573 CKGLMTKHPGKRLGCGPEGERDIKEHAFFR 602 (674)
T ss_dssp HHHHSCSSSTTCTTCSTTHHHHHHSSGGGS
T ss_pred HHHHccCCHHHCCCCCCCcHHHHhcCcccc
Confidence 677888899999998 8999999975
No 120
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2e-40 Score=348.33 Aligned_cols=236 Identities=27% Similarity=0.373 Sum_probs=197.2
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|+.+ ++..||+|++............+.+|+.+++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 356899999999999999999875 6889999999865543344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC---CcEEEeeecccccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE---FEAFVADFGIARLL 469 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~~ 469 (560)
||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++.. +.+||+|||+++..
T Consensus 116 e~~~~g~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMK---FNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp ECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred ecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999998875433 89999999999999999999999 99999999999999764 55999999999876
Q ss_pred CCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cccc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSS 528 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~ 528 (560)
... .......||+.|+|||++. ..++.++||||+||++|||++|+.||..... .+..
T Consensus 190 ~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 267 (494)
T 3lij_A 190 ENQ-KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEG 267 (494)
T ss_dssp BTT-BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHH
T ss_pred CCC-ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHH
Confidence 533 2334457999999999876 4689999999999999999999999964432 1223
Q ss_pred cccccccccccCCCCCCChhHHHhhceee
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
+...++.|...||..||++.++++|+|+.
T Consensus 268 ~~~li~~~L~~dp~~R~s~~e~l~hp~~~ 296 (494)
T 3lij_A 268 AKDLIKQMLQFDSQRRISAQQALEHPWIK 296 (494)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred HHHHHHHHCCCChhhCccHHHHhcCcccc
Confidence 45667788899999999999999999985
No 121
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=9.9e-41 Score=337.52 Aligned_cols=233 Identities=29% Similarity=0.409 Sum_probs=186.2
Q ss_pred cCCcccceeeccCCeeEEEEEeC----CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (560)
++|++.+.||+|+||.||+|+.+ ++..||||+++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 57889999999999999999865 577899999975432 2345679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+++|+|.++++... ..+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 124 v~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 999999999999998643 2389999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------cccc
Q 035761 471 YDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSS 528 (560)
Q Consensus 471 ~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~ 528 (560)
..... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 278 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAA 278 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHH
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHH
Confidence 43221 112235678999999999999999999999999999998 9999964432 1123
Q ss_pred cccccccccccCCCCCCChhHHHhh
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.+.+..|...||..||+++++++.
T Consensus 279 l~~li~~cl~~dp~~RPs~~~i~~~ 303 (373)
T 2qol_A 279 LYQLMLDCWQKDRNNRPKFEQIVSI 303 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHhCcChhhCcCHHHHHHH
Confidence 4566677888899999999998764
No 122
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=322.89 Aligned_cols=239 Identities=24% Similarity=0.321 Sum_probs=199.0
Q ss_pred CCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEec
Q 035761 316 DFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEY 394 (560)
Q Consensus 316 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (560)
+|.....||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 355566899999999999986 468899999987543 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC-CCcEEEeeeccccccCCCC
Q 035761 395 MEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS-EFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 395 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~ 473 (560)
+++++|.+++........+++..+..++.|++.||+|||+. +++||||||+||+++. ++.+||+|||++.......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999998765445578999999999999999999999 9999999999999987 8999999999998765433
Q ss_pred CCceeeccccCccCccccccCc--cCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------ccccccc
Q 035761 474 SNRTLLAGTYGSIAPELAYTMV--VTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSSSLDK 531 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~--~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~~~~~ 531 (560)
.......|++.|+|||++.+.. ++.++||||||+++|||++|+.||..... ....+.+
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA 257 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHH
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHH
Confidence 3344457899999999987653 78899999999999999999999964332 1223445
Q ss_pred ccccccccCCCCCCChhHHHhhceeeec
Q 035761 532 NIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 532 ~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
.++.|...||..||+++++++|+|+...
T Consensus 258 li~~~l~~dp~~Rps~~~ll~~~~~~~~ 285 (295)
T 2clq_A 258 FILKCFEPDPDKRACANDLLVDEFLKVS 285 (295)
T ss_dssp HHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred HHHHHccCChhhCCCHHHHhcChhhhhc
Confidence 6677888999999999999999998754
No 123
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.5e-40 Score=330.47 Aligned_cols=243 Identities=23% Similarity=0.365 Sum_probs=183.4
Q ss_pred HhcCCcccceeeccCCeeEEEEEeCCCc----EEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLPSGK----VVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
..++|++.+.||+|+||.||+|...... .||||+++.........+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 3467999999999999999999875432 799999976543444567899999999999999999999999887655
Q ss_pred ------EEEEeccCCCCHHHHhhcCC---cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEE
Q 035761 389 ------FLIYEYMEMGSLFCILRTDE---EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAF 459 (560)
Q Consensus 389 ------~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 459 (560)
++||||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986532 122489999999999999999999999 999999999999999999999
Q ss_pred EeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------
Q 035761 460 VADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------ 524 (560)
Q Consensus 460 l~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------ 524 (560)
|+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~ 257 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR 257 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCC
Confidence 9999999876433222 123346788999999999999999999999999999999 9999975432
Q ss_pred ------cccccccccccccccCCCCCCC-------hhHHHhhceeee
Q 035761 525 ------SSSSLDKNIKLIDLLDPRLPPP-------GDQMIRQGIILI 558 (560)
Q Consensus 525 ------~~~~~~~~~~~~~~~dp~~~p~-------~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+ +++++.+.|+..
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 258 LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 1123456677888999999999 777777777754
No 124
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.3e-40 Score=340.55 Aligned_cols=238 Identities=26% Similarity=0.329 Sum_probs=195.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC-----CE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE-----KC 387 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 387 (560)
.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+++++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 367999999999999999999864 578999999976544445567889999999999999999999999776 56
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||++ |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 899999997 59999997643 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC----------------------CceeeccccCccCcccc-ccCccCcchhHHHHHHHHHHHHhCCCCCC----
Q 035761 468 LLNYDSS----------------------NRTLLAGTYGSIAPELA-YTMVVTEKYDVYSFGVVALEVLMGKHPGE---- 520 (560)
Q Consensus 468 ~~~~~~~----------------------~~~~~~g~~~~~aPE~~-~~~~~~~~~Dv~s~G~il~el~~g~~P~~---- 520 (560)
....... .....+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~ 257 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGG
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccc
Confidence 7643221 12446789999999985 56679999999999999999998544432
Q ss_pred -------ccc-----------------------------------------------------------------ccccc
Q 035761 521 -------LLS-----------------------------------------------------------------SSSSS 528 (560)
Q Consensus 521 -------~~~-----------------------------------------------------------------~~~~~ 528 (560)
..+ .....
T Consensus 258 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 337 (432)
T 3n9x_A 258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDD 337 (432)
T ss_dssp GCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHH
T ss_pred cccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHH
Confidence 211 01223
Q ss_pred cccccccccccCCCCCCChhHHHhhceeee
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+...++.|...||..||+++++++|+|+..
T Consensus 338 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~ 367 (432)
T 3n9x_A 338 GINLLESMLKFNPNKRITIDQALDHPYLKD 367 (432)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHTCGGGTT
T ss_pred HHHHHHHHhcCCcccCCCHHHHhcChhhhh
Confidence 345667888999999999999999999853
No 125
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=326.96 Aligned_cols=238 Identities=29% Similarity=0.435 Sum_probs=201.2
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
..++|++.+.||+|+||.||+|... +|+.||+|.+.... ..+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 3567999999999999999999875 58999999987543 235688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 103 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 103 MEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp EECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred eecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 99999999999987422 2389999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------ccccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSSSLDK 531 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~~~~~ 531 (560)
.........|++.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.+
T Consensus 178 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 257 (314)
T 3com_A 178 TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTD 257 (314)
T ss_dssp TBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHH
T ss_pred hccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHH
Confidence 43344455789999999999999999999999999999999999999975432 1223456
Q ss_pred ccccccccCCCCCCChhHHHhhceeeec
Q 035761 532 NIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 532 ~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
.++.|...||..||++.++++|+|+..+
T Consensus 258 li~~~l~~dp~~Rpt~~~ll~~~~~~~~ 285 (314)
T 3com_A 258 FVKQCLVKSPEQRATATQLLQHPFVRSA 285 (314)
T ss_dssp HHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred HHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence 6778889999999999999999998653
No 126
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.9e-40 Score=320.64 Aligned_cols=237 Identities=23% Similarity=0.365 Sum_probs=196.5
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|.+.+.||+|+||.||+|... +|+.||||.+..... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57889999999999999999875 689999999876432 2344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++++|.+++..... +++.++..++.||+.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp ECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred eccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999976433 89999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCcccc-----------------cccccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSSSLDKNIK 534 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~~~~~~~~ 534 (560)
.......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... ....+...++
T Consensus 165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 243 (276)
T 2h6d_A 165 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLM 243 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred -cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHH
Confidence 22334568999999999988765 5799999999999999999999975431 1233456677
Q ss_pred cccccCCCCCCChhHHHhhceeee
Q 035761 535 LIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.|...||..||+++++++|+|+..
T Consensus 244 ~~l~~~p~~Rps~~~~l~h~~~~~ 267 (276)
T 2h6d_A 244 HMLQVDPLKRATIKDIREHEWFKQ 267 (276)
T ss_dssp HHTCSSGGGSCCHHHHHHSHHHHT
T ss_pred HHccCChhhCCCHHHHHhChhhcc
Confidence 888899999999999999999853
No 127
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.1e-40 Score=336.64 Aligned_cols=235 Identities=24% Similarity=0.314 Sum_probs=202.0
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|++.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccC-HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 57899999999999999999875 689999999876432 2345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHH-HCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
|+++|+|.+++..... +++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999976433 8999999999999999999998 5 7999999999999999999999999999765322
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------------------
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------------- 524 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------------- 524 (560)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...+.
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 22334689999999999999999999999999999999999999964331
Q ss_pred ---------------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 ---------------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 ---------------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 330 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence 1223446677888999999999999999999864
No 128
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.6e-41 Score=343.01 Aligned_cols=236 Identities=14% Similarity=0.120 Sum_probs=190.8
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchh-hhhhhHHHHHHHHH---HHhccCCCCcceee-------eE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLE-TELASLESFQNEAR---LLSQIRHRNIVKLY-------GF 381 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~---~l~~l~h~niv~l~-------~~ 381 (560)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|++ .++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999986 468999999987542 22334567889994 55556899999999 66
Q ss_pred EEeCC-----------------EEEEEEeccCCCCHHHHhhcCCc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 035761 382 CLHEK-----------------CMFLIYEYMEMGSLFCILRTDEE----AVGLDWTKRVNIVKGMAHALSYLHHHCTPPI 440 (560)
Q Consensus 382 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 440 (560)
+..++ ..++||||+ +|+|.+++..... ...+++..+..|+.||+.||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 65543 278999999 6899999975422 11244688889999999999999999 99
Q ss_pred EEeCCCCCCeEeCCCCcEEEeeeccccccCCCCCCceeeccccCccCccccccC-----------ccCcchhHHHHHHHH
Q 035761 441 LHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTM-----------VVTEKYDVYSFGVVA 509 (560)
Q Consensus 441 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~-----------~~~~~~Dv~s~G~il 509 (560)
+||||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 999999999999999999999999998633 23344567 999999999988 899999999999999
Q ss_pred HHHHhCCCCCCcccc-------------cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 510 LEVLMGKHPGELLSS-------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 510 ~el~~g~~P~~~~~~-------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
|||++|+.||..... ....+.+.+..|...||..||++.++++|+|+.
T Consensus 304 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~ 364 (377)
T 3byv_A 304 YWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 364 (377)
T ss_dssp HHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred HHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence 999999999965432 123445667788899999999999999999975
No 129
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2e-40 Score=335.62 Aligned_cols=233 Identities=24% Similarity=0.280 Sum_probs=190.6
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC------E
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK------C 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 387 (560)
++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57899999999999999999764 6889999999765444445567889999999999999999999997664 7
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||+++ +|.+++.. .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 105 ~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred eEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 8999999975 78888853 289999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc----------------------
Q 035761 468 LLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS---------------------- 525 (560)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~---------------------- 525 (560)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..
T Consensus 176 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 176 TAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred ccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 76432 2233457899999999999999999999999999999999999999654320
Q ss_pred -------------------------------------ccccccccccccccCCCCCCChhHHHhhceee
Q 035761 526 -------------------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 526 -------------------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
...+.+.++.|...||..||+++++++|+|+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 323 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchh
Confidence 11234567788899999999999999999975
No 130
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.2e-40 Score=349.54 Aligned_cols=237 Identities=25% Similarity=0.384 Sum_probs=204.2
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
.++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457899999999999999999875 689999999865432 233456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe---CCCCcEEEeeeccccc
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL---NSEFEAFVADFGIARL 468 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~ 468 (560)
|||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 105 ~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp ECCCCSCBHHHHHHTCSC---CBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 999999999999976543 89999999999999999999999 99999999999999 5678999999999987
Q ss_pred cCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------ccc
Q 035761 469 LNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSS 527 (560)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~ 527 (560)
+... .......||+.|+|||++.+ .++.++||||+||++|||++|+.||..... .+.
T Consensus 179 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 256 (484)
T 3nyv_A 179 FEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE 256 (484)
T ss_dssp BCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCH
T ss_pred cccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCH
Confidence 6533 23344579999999999876 689999999999999999999999965432 122
Q ss_pred ccccccccccccCCCCCCChhHHHhhceeee
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+...++.|...||..||+++++++|+|+..
T Consensus 257 ~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~ 287 (484)
T 3nyv_A 257 SAKDLIRKMLTYVPSMRISARDALDHEWIQT 287 (484)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHTSHHHHH
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhhChhhcc
Confidence 3456678888999999999999999999864
No 131
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9e-41 Score=337.11 Aligned_cols=243 Identities=23% Similarity=0.348 Sum_probs=201.6
Q ss_pred HHHHHHHhcCCcccceeeccCCeeEEEEEe------CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceee
Q 035761 307 FQDMIEATEDFDIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLY 379 (560)
Q Consensus 307 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~ 379 (560)
..++....++|++.+.||+|+||.||+|++ .+++.||||+++.... ....+.+.+|+++++++ +||||++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC-HHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 445555668899999999999999999973 2467899999975432 23456789999999999 799999999
Q ss_pred eEEEeCCE-EEEEEeccCCCCHHHHhhcCCc-------------------------------------------------
Q 035761 380 GFCLHEKC-MFLIYEYMEMGSLFCILRTDEE------------------------------------------------- 409 (560)
Q Consensus 380 ~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------- 409 (560)
+++.+.+. .++||||+++|+|.++++....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 99987654 8999999999999999976532
Q ss_pred --------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCCCC
Q 035761 410 --------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN 475 (560)
Q Consensus 410 --------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 475 (560)
...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 11289999999999999999999999 9999999999999999999999999999876433322
Q ss_pred --ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc-------------------ccccccccc
Q 035761 476 --RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS-------------------SSSSLDKNI 533 (560)
Q Consensus 476 --~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~-------------------~~~~~~~~~ 533 (560)
.....||+.|+|||++.+..++.++||||||+++|||++ |+.||..... ....+.+.+
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 329 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 329 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHH
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 233568889999999999999999999999999999998 9999975432 112345666
Q ss_pred ccccccCCCCCCChhHHHhh
Q 035761 534 KLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~ 553 (560)
..|...||..||++.+++++
T Consensus 330 ~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 330 LDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHccCChhhCCCHHHHHHH
Confidence 77888899999999999876
No 132
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3e-40 Score=329.09 Aligned_cols=228 Identities=18% Similarity=0.238 Sum_probs=194.2
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++.+ +||||+++++++...+..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 5789999999999999999986 5789999999865432 23578899999999 9999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc-----EEEeeecccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE-----AFVADFGIAR 467 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~~ 467 (560)
||+ +++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 85 e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp ECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred EeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 999 999999998642 2499999999999999999999999 9999999999999999887 9999999998
Q ss_pred ccCCCCCC-------ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccccc--------------
Q 035761 468 LLNYDSSN-------RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS-------------- 526 (560)
Q Consensus 468 ~~~~~~~~-------~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~-------------- 526 (560)
.+...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA 238 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc
Confidence 76433221 234579999999999999999999999999999999999999998643211
Q ss_pred ----------cccccccccccccCCCCCCChhHHHh
Q 035761 527 ----------SSLDKNIKLIDLLDPRLPPPGDQMIR 552 (560)
Q Consensus 527 ----------~~~~~~~~~~~~~dp~~~p~~~~~~~ 552 (560)
..+.+.++.|...||..||+++++.+
T Consensus 239 ~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 239 TPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp SCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred CCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 13445566677889999999988876
No 133
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4e-40 Score=323.87 Aligned_cols=227 Identities=29% Similarity=0.430 Sum_probs=186.5
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhc--cCCCCcceeeeEEEeC----CE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQ--IRHRNIVKLYGFCLHE----KC 387 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~ 387 (560)
.++|++.+.||+|+||.||+|++ +++.||||++.... ...+.+|.+++.. ++||||+++++++... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD-----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc-----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 46799999999999999999988 68999999987532 2345667777766 7999999999997653 45
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEeCCCCCCeEeCCCCcEE
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLH--------HHCTPPILHRDISSNNILLNSEFEAF 459 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~k 459 (560)
.++||||+++|+|.++++.. .+++.++..++.|++.||+||| +. +|+||||||+||+++.++.+|
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred eEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence 89999999999999999643 3899999999999999999999 77 999999999999999999999
Q ss_pred EeeeccccccCCCCCC----ceeeccccCccCccccccC------ccCcchhHHHHHHHHHHHHhC----------CCCC
Q 035761 460 VADFGIARLLNYDSSN----RTLLAGTYGSIAPELAYTM------VVTEKYDVYSFGVVALEVLMG----------KHPG 519 (560)
Q Consensus 460 l~Dfg~~~~~~~~~~~----~~~~~g~~~~~aPE~~~~~------~~~~~~Dv~s~G~il~el~~g----------~~P~ 519 (560)
|+|||+++........ .....||+.|+|||++.+. .++.++||||||+++|||++| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 9999999876433222 1224689999999998877 556799999999999999999 8888
Q ss_pred Ccccccc-----------------------------cccccccccccccCCCCCCChhHHHhh
Q 035761 520 ELLSSSS-----------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 520 ~~~~~~~-----------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....... ..+.+.++.|...||..||+++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred cccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 5432111 124456677788899999999988764
No 134
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=332.47 Aligned_cols=232 Identities=16% Similarity=0.180 Sum_probs=188.8
Q ss_pred hcCCcccceeeccCCeeEEEEE------eCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC---CCCcceeeeEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRAR------LPSGKVVALKKLHRLETELASLESFQNEARLLSQIR---HRNIVKLYGFCLH 384 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 384 (560)
.++|.+.+.||+|+||.||+|. ..+++.||||++.... ...+.+|.++++.++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 4678899999999999999994 4568899999987543 336777888888876 9999999999999
Q ss_pred CCEEEEEEeccCCCCHHHHhhcCC--cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC--------
Q 035761 385 EKCMFLIYEYMEMGSLFCILRTDE--EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS-------- 454 (560)
Q Consensus 385 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-------- 454 (560)
++..++||||+++|+|.+++.... ....+++.++..|+.||++||+|||+. +||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 999999999999999999997421 223499999999999999999999998 9999999999999998
Q ss_pred ---CCcEEEeeeccccccCCC--CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccccc--
Q 035761 455 ---EFEAFVADFGIARLLNYD--SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSSS-- 527 (560)
Q Consensus 455 ---~~~~kl~Dfg~~~~~~~~--~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~~-- 527 (560)
++.+||+|||+|+.+... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~ 295 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKP 295 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEE
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceee
Confidence 899999999999765422 2223345799999999999999999999999999999999999999864433211
Q ss_pred -----------ccccccccccccCCCCCCChhHHHhh
Q 035761 528 -----------SLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 528 -----------~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+.+....+...+|..|++..+.+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 296 EGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ 332 (365)
T ss_dssp CSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred chhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence 22334445667788877665554443
No 135
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.5e-40 Score=334.17 Aligned_cols=245 Identities=22% Similarity=0.276 Sum_probs=198.1
Q ss_pred HHHHHHHhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhh---------hhhHHHHHHHHHHHhccCCCCcce
Q 035761 307 FQDMIEATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETE---------LASLESFQNEARLLSQIRHRNIVK 377 (560)
Q Consensus 307 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~ 377 (560)
..++....++|++.+.||+|+||.||+|...+|+.||||++...... ....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 45667778999999999999999999999888999999998653321 122467899999999999999999
Q ss_pred eeeEEEe-----CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe
Q 035761 378 LYGFCLH-----EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL 452 (560)
Q Consensus 378 l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 452 (560)
+++++.. ....++||||++ |+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILL 167 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEE
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEE
Confidence 9999854 236899999998 58888887543 2489999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccc-------
Q 035761 453 NSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSS------- 524 (560)
Q Consensus 453 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------- 524 (560)
+.++.+||+|||+++..... .......|++.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp CTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999999865432 22334568999999999877 6789999999999999999999999975431
Q ss_pred ------------------------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 ------------------------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 ------------------------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||++.++++|+|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 322 (362)
T 3pg1_A 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322 (362)
T ss_dssp HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence 0122456677888999999999999999999863
No 136
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=6.9e-40 Score=345.15 Aligned_cols=237 Identities=29% Similarity=0.385 Sum_probs=200.2
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhh-----------hhHHHHHHHHHHHhccCCCCcceeeeE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETEL-----------ASLESFQNEARLLSQIRHRNIVKLYGF 381 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~l~~~ 381 (560)
.++|.+.+.||+|+||.||+|..+ +++.||||++....... ...+.+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467999999999999999999875 57899999987543211 234678899999999999999999999
Q ss_pred EEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC---cE
Q 035761 382 CLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF---EA 458 (560)
Q Consensus 382 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~ 458 (560)
+.+++..++||||+++|+|.+++..... +++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 9999999999999999999999876433 89999999999999999999999 999999999999998775 69
Q ss_pred EEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------
Q 035761 459 FVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------- 524 (560)
Q Consensus 459 kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------- 524 (560)
||+|||+++..... .......||+.|+|||++. ..++.++||||+||++|||++|+.||.....
T Consensus 189 kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 266 (504)
T 3q5i_A 189 KIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF 266 (504)
T ss_dssp EECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred EEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99999999876533 2334457999999999987 4689999999999999999999999975432
Q ss_pred -------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+..+.+.++.|...||..||+++++++|+|+..
T Consensus 267 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 307 (504)
T 3q5i_A 267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307 (504)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence 2234566778888999999999999999999853
No 137
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.4e-40 Score=326.39 Aligned_cols=229 Identities=18% Similarity=0.274 Sum_probs=197.3
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CCCcceeeeEEEe--CCEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIR-HRNIVKLYGFCLH--EKCMFL 390 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~l 390 (560)
++|++.+.||+|+||.||+|.. .+++.||||+++... .+.+.+|+++++.++ ||||+++++++.. ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 6789999999999999999975 568999999987433 346889999999997 9999999999988 567899
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC-cEEEeeecccccc
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF-EAFVADFGIARLL 469 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~ 469 (560)
||||+++++|.+++.. +++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+++..
T Consensus 111 v~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 9999999999999853 88999999999999999999999 999999999999999776 8999999999876
Q ss_pred CCCCCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccc------------------------
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------------------ 524 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------------------ 524 (560)
.... ......|+..|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 182 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 182 HPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp CTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 5332 2334568999999999887 6689999999999999999999999943211
Q ss_pred -------------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -------------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -------------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~ 325 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 325 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence 1233456778888999999999999999999864
No 138
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.2e-40 Score=323.56 Aligned_cols=235 Identities=23% Similarity=0.338 Sum_probs=200.4
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|.+.+.||+|+||.||+|+.. +|+.||+|.+..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 457899999999999999999875 689999999975432 22356889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe---CCCCcEEEeeecccccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL---NSEFEAFVADFGIARLL 469 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~ 469 (560)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +++||||||+||++ +.++.+||+|||++...
T Consensus 86 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 86 QLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999999987543 389999999999999999999999 99999999999999 78899999999999764
Q ss_pred CCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cccc
Q 035761 470 NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSS 528 (560)
Q Consensus 470 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~ 528 (560)
.. .......|++.|+|||++.+..++.++||||+|+++|||++|+.||..... ....
T Consensus 160 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 237 (304)
T 2jam_A 160 QN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISES 237 (304)
T ss_dssp CC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHH
T ss_pred CC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHH
Confidence 32 223345689999999999999999999999999999999999999964321 1233
Q ss_pred cccccccccccCCCCCCChhHHHhhceeee
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
+.+.+..|...||..||+++++++|+|+..
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 238 AKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp HHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 456667788899999999999999999854
No 139
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.3e-40 Score=322.60 Aligned_cols=232 Identities=25% Similarity=0.396 Sum_probs=196.0
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
.++|++.+.||+|+||.||+|.+.++..||+|+++.... ..+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 467899999999999999999999888999999975432 23568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 100 YMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp CCTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred ccCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 9999999999976332 389999999999999999999999 99999999999999999999999999998654321
Q ss_pred -CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------ccccccccc
Q 035761 474 -SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSSLDKNI 533 (560)
Q Consensus 474 -~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~~~~~~ 533 (560)
.......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ....+.+.+
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 254 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 254 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHH
Confidence 11122346778999999999999999999999999999998 9999975432 122345666
Q ss_pred ccccccCCCCCCChhHHHhh
Q 035761 534 KLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.|...||..||++++++++
T Consensus 255 ~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 255 YSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHTTCSSGGGSCCHHHHHHH
T ss_pred HHHccCChhHCcCHHHHHHH
Confidence 77888899999999999876
No 140
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=332.65 Aligned_cols=237 Identities=25% Similarity=0.397 Sum_probs=197.0
Q ss_pred HhcCCcccceeeccCCeeEEEEEe------CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeC
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHE 385 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 385 (560)
..++|++.+.||+|+||.||+|.. .+++.||||.+..... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 457899999999999999999985 2456899999975432 23346788999999999 899999999999999
Q ss_pred CEEEEEEeccCCCCHHHHhhcCCcc--------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC
Q 035761 386 KCMFLIYEYMEMGSLFCILRTDEEA--------------------VGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDI 445 (560)
Q Consensus 386 ~~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl 445 (560)
+..++||||+++|+|.+++...... ..+++.++..++.||+.||+|||+. +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 9999999999999999999765321 2379999999999999999999999 9999999
Q ss_pred CCCCeEeCCCCcEEEeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 035761 446 SSNNILLNSEFEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELL 522 (560)
Q Consensus 446 k~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~ 522 (560)
||+||+++.++.+||+|||++......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999876543332 123457889999999999999999999999999999998 99999754
Q ss_pred ccc-------------------ccccccccccccccCCCCCCChhHHHhh
Q 035761 523 SSS-------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 523 ~~~-------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
... ...+...++.|...||..||++.+++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 328 (344)
T 1rjb_A 279 PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328 (344)
T ss_dssp CCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 421 1234456677888899999999998876
No 141
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.6e-40 Score=336.52 Aligned_cols=235 Identities=11% Similarity=0.048 Sum_probs=181.6
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhcc--CCCCcceee-------eEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQI--RHRNIVKLY-------GFCL 383 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~~ 383 (560)
.+|...+.||+|+||.||+|.+. +|+.||||++..... .....+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999865 689999999987543 334455677885544444 699977754 4444
Q ss_pred eC-----------------CEEEEEEeccCCCCHHHHhhcCCcccCCCHHHH------HHHHHHHHHHHHHHHhcCCCCe
Q 035761 384 HE-----------------KCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKR------VNIVKGMAHALSYLHHHCTPPI 440 (560)
Q Consensus 384 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~i 440 (560)
.+ ...++||||++ |+|.+++..... .+++..+ ..++.||+.||+|||+. +|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 33 33799999999 899999986432 2566666 78889999999999999 99
Q ss_pred EEeCCCCCCeEeCCCCcEEEeeeccccccCCCCCCceeeccccCccCcccccc--CccCcchhHHHHHHHHHHHHhCCCC
Q 035761 441 LHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYT--MVVTEKYDVYSFGVVALEVLMGKHP 518 (560)
Q Consensus 441 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~--~~~~~~~Dv~s~G~il~el~~g~~P 518 (560)
+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999987532 2224457799999999987 7799999999999999999999999
Q ss_pred CCcccc--------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 519 GELLSS--------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 519 ~~~~~~--------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
|..... ....+.+.++.|...||..||++.++++|+|+..
T Consensus 293 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 358 (371)
T 3q60_A 293 FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358 (371)
T ss_dssp TTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred CCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence 976521 1223445667788899999999999999999753
No 142
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=9.3e-40 Score=336.52 Aligned_cols=233 Identities=19% Similarity=0.239 Sum_probs=196.7
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc------CCCCcceeeeEEEeCCE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQI------RHRNIVKLYGFCLHEKC 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~ 387 (560)
.+|++.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+.+++.+ +|+||+++++++.....
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc---chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 56899999999999999999765 58899999997543 2234567788887776 57799999999999999
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc--EEEeeecc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE--AFVADFGI 465 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~ 465 (560)
.++||||+. ++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 999999996 699999876542 3389999999999999999999999 9999999999999999887 99999999
Q ss_pred ccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------------
Q 035761 466 ARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS-------------------- 525 (560)
Q Consensus 466 ~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~-------------------- 525 (560)
++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 249 a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~ 325 (429)
T 3kvw_A 249 SCYEHQ---RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDA 325 (429)
T ss_dssp CEETTC---CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred ceecCC---cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHh
Confidence 976432 223356899999999999999999999999999999999999999644310
Q ss_pred --------------------------------------------------------ccccccccccccccCCCCCCChhH
Q 035761 526 --------------------------------------------------------SSSLDKNIKLIDLLDPRLPPPGDQ 549 (560)
Q Consensus 526 --------------------------------------------------------~~~~~~~~~~~~~~dp~~~p~~~~ 549 (560)
...+.+.++.|...||..||++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e 405 (429)
T 3kvw_A 326 SKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQ 405 (429)
T ss_dssp BTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred hhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHH
Confidence 111335667788999999999999
Q ss_pred HHhhceeee
Q 035761 550 MIRQGIILI 558 (560)
Q Consensus 550 ~~~~~~~~~ 558 (560)
+++|+|+..
T Consensus 406 ~L~Hpw~~~ 414 (429)
T 3kvw_A 406 ALRHPWLRR 414 (429)
T ss_dssp HHTSTTTC-
T ss_pred HhCChhhcc
Confidence 999999874
No 143
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=333.20 Aligned_cols=236 Identities=25% Similarity=0.356 Sum_probs=199.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeC--------CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLH 384 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 384 (560)
.++|.+.+.||+|+||.||+|+.. .+..||||+++.... ....+.+.+|+++++.+ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC-HHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 367889999999999999999852 246799999976432 34456788999999999 99999999999999
Q ss_pred CCEEEEEEeccCCCCHHHHhhcCCc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeE
Q 035761 385 EKCMFLIYEYMEMGSLFCILRTDEE-------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNIL 451 (560)
Q Consensus 385 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 451 (560)
++..++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 9999999999999999999976432 23489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCC--CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc----
Q 035761 452 LNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS---- 524 (560)
Q Consensus 452 l~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~---- 524 (560)
++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~ 303 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999987653322 2223457889999999999999999999999999999999 9999975431
Q ss_pred --------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 --------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 --------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||++++++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 304 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 12234566777888899999999999876
No 144
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=334.44 Aligned_cols=238 Identities=27% Similarity=0.373 Sum_probs=198.3
Q ss_pred cCCcccceeeccCCeeEEEEEe----CCCcEEEEEEccchhh--hhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL----PSGKVVALKKLHRLET--ELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKC 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 387 (560)
++|++.+.||+|+||.||+|+. .+++.||||+++.... .....+.+.+|+++++.+ +||||+++++++..++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5799999999999999999987 3689999999875331 112234567899999999 69999999999999999
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999997643 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CceeeccccCccCcccccc--CccCcchhHHHHHHHHHHHHhCCCCCCccccc-------------------
Q 035761 468 LLNYDSS-NRTLLAGTYGSIAPELAYT--MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS------------------- 525 (560)
Q Consensus 468 ~~~~~~~-~~~~~~g~~~~~aPE~~~~--~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~------------------- 525 (560)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCT
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCc
Confidence 7543222 2233569999999999885 34788999999999999999999999643321
Q ss_pred --ccccccccccccccCCCCCC-----ChhHHHhhceeee
Q 035761 526 --SSSLDKNIKLIDLLDPRLPP-----PGDQMIRQGIILI 558 (560)
Q Consensus 526 --~~~~~~~~~~~~~~dp~~~p-----~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..|| +++++++|+|+..
T Consensus 288 ~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 288 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 11234566778888999999 9999999999864
No 145
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=334.95 Aligned_cols=237 Identities=25% Similarity=0.341 Sum_probs=198.0
Q ss_pred cCCcccceeeccCCeeEEEEEeC------CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
++|++.+.||+|+||.||+|.+. +++.||||+++.... ......+.+|+.++++++||||+++++++......
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 57889999999999999999853 467899999975432 23345688999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHhhcCC----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC---cEEEe
Q 035761 389 FLIYEYMEMGSLFCILRTDE----EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF---EAFVA 461 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 461 (560)
++||||+++|+|.+++.... ....+++.++..++.||++||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997643 123489999999999999999999999 999999999999999554 59999
Q ss_pred eeccccccCCCC--CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc--------------
Q 035761 462 DFGIARLLNYDS--SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS-------------- 524 (560)
Q Consensus 462 Dfg~~~~~~~~~--~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~-------------- 524 (560)
|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~ 306 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 306 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999998653222 22233467899999999999999999999999999999998 9999975432
Q ss_pred ----cccccccccccccccCCCCCCChhHHHhhce
Q 035761 525 ----SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGI 555 (560)
Q Consensus 525 ----~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~ 555 (560)
....+.++++.|...||..||++++++++.+
T Consensus 307 ~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 307 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1123456778888999999999999998743
No 146
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.5e-40 Score=325.54 Aligned_cols=239 Identities=26% Similarity=0.383 Sum_probs=197.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 467999999999999999999875 58899999987543 234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++++|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 96 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp ECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred EeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999987532 2389999999999999999999999 9999999999999999999999999987643222
Q ss_pred CCCceeeccccCccCcccc-----ccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------ccc
Q 035761 473 SSNRTLLAGTYGSIAPELA-----YTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSS 527 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~-----~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~ 527 (560)
........|++.|+|||++ .+..++.++||||||+++|||++|+.||..... ...
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (302)
T 2j7t_A 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSV 250 (302)
T ss_dssp HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCH
T ss_pred ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCH
Confidence 1222334689999999988 366788899999999999999999999975432 112
Q ss_pred ccccccccccccCCCCCCChhHHHhhceeeec
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
.+...++.|...||..||++.++++|+|+...
T Consensus 251 ~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 282 (302)
T 2j7t_A 251 EFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282 (302)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred HHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence 34566677888999999999999999998653
No 147
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.1e-40 Score=317.47 Aligned_cols=232 Identities=31% Similarity=0.488 Sum_probs=185.3
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhh--hhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETE--LASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|.+. ++.||||+++..... ....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999975 889999998754322 233567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC--------CCcEEEeeec
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS--------EFEAFVADFG 464 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Dfg 464 (560)
||+++++|.+++... .+++.++..++.|++.||+|||+....+|+||||||+||+++. ++.+||+|||
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp ECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999643 3899999999999999999999981112999999999999986 6789999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-------------------c
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------S 525 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------~ 525 (560)
++....... .....|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... .
T Consensus 162 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (271)
T 3dtc_A 162 LAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC 239 (271)
T ss_dssp C---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTC
T ss_pred ccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCccc
Confidence 998764322 2234689999999999999999999999999999999999999975432 1
Q ss_pred ccccccccccccccCCCCCCChhHHHhh
Q 035761 526 SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 526 ~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...+.+.++.|...||..||++++++++
T Consensus 240 ~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 240 PEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 2235566777888899999999998875
No 148
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.1e-40 Score=326.87 Aligned_cols=232 Identities=23% Similarity=0.405 Sum_probs=188.5
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCc----EEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGK----VVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
++|+..+.||+|+||.||+|.+. +++ +||+|.+.... .....+.+.+|+.++++++||||+++++++..+. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 56889999999999999999864 344 36888876433 2344567899999999999999999999998765 78
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+|+||+++|+|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 99999999999999986433 389999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------ccc
Q 035761 470 NYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSS 528 (560)
Q Consensus 470 ~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~ 528 (560)
...... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ...
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHH
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHH
Confidence 543322 223456789999999999999999999999999999999 99999754321 112
Q ss_pred cccccccccccCCCCCCChhHHHhh
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+...+..|...||..||++.+++++
T Consensus 248 ~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 248 VYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp HHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHH
Confidence 4455677888899999999999865
No 149
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-40 Score=329.63 Aligned_cols=237 Identities=28% Similarity=0.399 Sum_probs=198.1
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC------CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK 386 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 386 (560)
..++|++.+.||+|+||.||+|+.. +++.||||.++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 3578999999999999999999874 347899999975432 234567899999999999999999999999999
Q ss_pred EEEEEEeccCCCCHHHHhhcCCc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCC
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEE---------------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDI 445 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl 445 (560)
..++||||+++|+|.+++..... ...+++.++..++.||++||+|||+. +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 99999999999999999976421 14589999999999999999999999 9999999
Q ss_pred CCCCeEeCCCCcEEEeeeccccccCCCCC--CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 035761 446 SSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELL 522 (560)
Q Consensus 446 k~~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~ 522 (560)
||+||+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999987643221 2233467889999999999999999999999999999999 99999754
Q ss_pred cc------------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 523 SS------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 523 ~~------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.. ....+.+.++.|...||..||++.++++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 281 AHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 32 11234556677788899999998888764
No 150
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.6e-40 Score=338.76 Aligned_cols=228 Identities=27% Similarity=0.393 Sum_probs=190.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC-EEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK-CMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+.++++++||||+++++++...+ ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 467888999999999999999985 7899999997543 3457899999999999999999999988765 789999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.++++.... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 99999999999986432 2379999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------cccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSSLDKNI 533 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~~~~~~ 533 (560)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ...+.+.+
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li 419 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVM 419 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHH
Confidence 222357889999999999999999999999999999998 99999754321 12234455
Q ss_pred ccccccCCCCCCChhHHHhh
Q 035761 534 KLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.|...||..||++.+++..
T Consensus 420 ~~cl~~dp~~Rpt~~~l~~~ 439 (450)
T 1k9a_A 420 KNCWHLDAATRPTFLQLREQ 439 (450)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCChhHCcCHHHHHHH
Confidence 66677788888888877653
No 151
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.6e-40 Score=323.21 Aligned_cols=232 Identities=26% Similarity=0.381 Sum_probs=190.9
Q ss_pred cCCcccceeeccCCeeEEEEEe-----CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC--CE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE--KC 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 387 (560)
++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 5788999999999999999984 368899999987543 23456789999999999999999999998654 45
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred eEEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 8999999999999999986543 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------
Q 035761 468 LLNYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------- 524 (560)
Q Consensus 468 ~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------- 524 (560)
........ .....++..|+|||++.+..++.++||||||+++|||++|..||.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 76433221 2223467789999999999999999999999999999999998864321
Q ss_pred --------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 --------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 --------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||++.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~ 285 (295)
T 3ugc_A 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 285 (295)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 12235566677888899999999888764
No 152
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.6e-40 Score=332.45 Aligned_cols=233 Identities=24% Similarity=0.320 Sum_probs=181.1
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC------C
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE------K 386 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 386 (560)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36799999999999999999975 4689999999976544444556788999999999999999999999754 4
Q ss_pred EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccc
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIA 466 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 466 (560)
..++|+||+ +++|.+++... .+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CCEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred eEEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 579999999 67999888752 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------------
Q 035761 467 RLLNYDSSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS-------------------- 525 (560)
Q Consensus 467 ~~~~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~-------------------- 525 (560)
+.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..
T Consensus 180 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 180 RHTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred ccccc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 87542 2334578999999999887 67899999999999999999999999754321
Q ss_pred ----------------------------ccccccccccccccCCCCCCChhHHHhhceee
Q 035761 526 ----------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 526 ----------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
...+...++.|...||..||+++++++|+|+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~ 316 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhh
Confidence 11234456678889999999999999999975
No 153
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.2e-40 Score=330.07 Aligned_cols=237 Identities=22% Similarity=0.330 Sum_probs=202.1
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhh---------------HHHHHHHHHHHhccCCCCcceee
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELAS---------------LESFQNEARLLSQIRHRNIVKLY 379 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---------------~~~~~~e~~~l~~l~h~niv~l~ 379 (560)
++|++.+.||+|+||.||+|.. +++.||||++......... .+.+.+|+++++.++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5799999999999999999998 8999999998754422111 16789999999999999999999
Q ss_pred eEEEeCCEEEEEEeccCCCCHHHH------hhcCCcccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEeCCCCCCeEe
Q 035761 380 GFCLHEKCMFLIYEYMEMGSLFCI------LRTDEEAVGLDWTKRVNIVKGMAHALSYLHH-HCTPPILHRDISSNNILL 452 (560)
Q Consensus 380 ~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill 452 (560)
+++.+.+..++||||+++|+|.++ +.... ...+++.++..++.|++.||+|||+ . +++||||||+||++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 999999999999999999999998 55421 3449999999999999999999998 8 99999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCCceeeccccCccCccccccC-ccCc-chhHHHHHHHHHHHHhCCCCCCcccc------
Q 035761 453 NSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTM-VVTE-KYDVYSFGVVALEVLMGKHPGELLSS------ 524 (560)
Q Consensus 453 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~-~~~~-~~Dv~s~G~il~el~~g~~P~~~~~~------ 524 (560)
+.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||||+++|||++|+.||.....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 263 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN 263 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHH
T ss_pred cCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence 99999999999999876432 33345689999999999887 6666 99999999999999999999975432
Q ss_pred -------------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -------------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -------------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||++.++++|+|+..
T Consensus 264 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 328 (348)
T 2pml_X 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328 (348)
T ss_dssp HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence 1122345667788889999999999999999864
No 154
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.2e-39 Score=318.09 Aligned_cols=238 Identities=22% Similarity=0.320 Sum_probs=202.8
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchh-------hhhhhHHHHHHHHHHHhccC-CCCcceeeeEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLE-------TELASLESFQNEARLLSQIR-HRNIVKLYGFCLH 384 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 384 (560)
.++|++.+.||+|+||.||+|..+ +|+.||||++.... ......+.+.+|++++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467999999999999999999875 58899999986432 11233457889999999995 9999999999999
Q ss_pred CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeec
Q 035761 385 EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFG 464 (560)
Q Consensus 385 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 464 (560)
++..++||||+++++|.+++.... .+++.++..++.||+.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 999999999999999999997643 389999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCceeeccccCccCccccc------cCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAY------TMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------- 524 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~------~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------- 524 (560)
++...... .......|++.|+|||++. ...++.++||||||+++|||++|+.||.....
T Consensus 170 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 248 (298)
T 1phk_A 170 FSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 248 (298)
T ss_dssp TCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred chhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCccc
Confidence 99876533 2333456899999999875 45678899999999999999999999864331
Q ss_pred -------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (298)
T 1phk_A 249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289 (298)
T ss_dssp CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhh
Confidence 1223556677888999999999999999999865
No 155
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.6e-39 Score=328.22 Aligned_cols=236 Identities=24% Similarity=0.324 Sum_probs=198.8
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC-----CE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE-----KC 387 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 387 (560)
.++|++.+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccC-cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 357999999999999999999864 688999999875432 23446788999999999999999999999765 36
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||++ |+|.+++.... +++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~~----~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEcccC-cCHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 899999997 59999987532 89999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccc-------------------
Q 035761 468 LLNYDSSN---RTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------------- 524 (560)
Q Consensus 468 ~~~~~~~~---~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------------- 524 (560)
........ .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHH
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 76533221 234578999999998654 4589999999999999999999999965431
Q ss_pred -----------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -----------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -----------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||++.++++|+|+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 319 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence 1223456777888999999999999999999863
No 156
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=7e-40 Score=324.20 Aligned_cols=236 Identities=25% Similarity=0.391 Sum_probs=198.5
Q ss_pred hcCCcccceeeccCCeeEEEEEe------CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKC 387 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 387 (560)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+++++.++||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS-PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 46788999999999999999975 2457899999975432 3445678999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHhhcCCc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCC
Q 035761 388 MFLIYEYMEMGSLFCILRTDEE---------------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDIS 446 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 446 (560)
.++||||+++|+|.+++..... ...+++.++..++.||++||+|||+. +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999976432 13389999999999999999999999 99999999
Q ss_pred CCCeEeCCCCcEEEeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 035761 447 SNNILLNSEFEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLS 523 (560)
Q Consensus 447 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~ 523 (560)
|+||+++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876433222 223456788999999999999999999999999999999 999997543
Q ss_pred c------------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 524 S------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 524 ~------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
. ....+.+.++.|...||..||++.+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 258 PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2 12234566677788899999999988765
No 157
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=9.8e-40 Score=330.55 Aligned_cols=232 Identities=25% Similarity=0.321 Sum_probs=196.0
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE----
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM---- 388 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 388 (560)
.++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357889999999999999999864 689999999986554444567788999999999999999999999876654
Q ss_pred --EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccc
Q 035761 389 --FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIA 466 (560)
Q Consensus 389 --~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 466 (560)
++||||++ ++|.+++.. .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred eEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 99999998 588888743 289999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------
Q 035761 467 RLLNYDSSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------- 524 (560)
Q Consensus 467 ~~~~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------- 524 (560)
+.... ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...+.
T Consensus 192 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 192 RHADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred ccccc---CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 86542 2334568999999999887 7789999999999999999999999975431
Q ss_pred ---------------------------cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 525 ---------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 525 ---------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
....+.+.++.|...||..||+++++++|+|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~ 328 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccc
Confidence 123445677888999999999999999999985
No 158
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=328.84 Aligned_cols=241 Identities=26% Similarity=0.420 Sum_probs=196.4
Q ss_pred HHHhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEe----
Q 035761 311 IEATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLH---- 384 (560)
Q Consensus 311 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~---- 384 (560)
....++|++.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|+.+++++ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 33467899999999999999999987 4689999999875432 235688999999999 89999999999987
Q ss_pred --CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEee
Q 035761 385 --EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVAD 462 (560)
Q Consensus 385 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 462 (560)
.+..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 467899999999999999998653 23489999999999999999999999 999999999999999999999999
Q ss_pred eccccccCCCCCCceeeccccCccCccccc-----cCccCcchhHHHHHHHHHHHHhCCCCCCcccc-------------
Q 035761 463 FGIARLLNYDSSNRTLLAGTYGSIAPELAY-----TMVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------- 524 (560)
Q Consensus 463 fg~~~~~~~~~~~~~~~~g~~~~~aPE~~~-----~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------- 524 (560)
||++..............|++.|+|||++. +..++.++||||||+++|||++|+.||.....
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 252 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP 252 (326)
T ss_dssp CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC
T ss_pred CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc
Confidence 999987654333344457899999999987 56788999999999999999999999965431
Q ss_pred ------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 ------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 ------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+...++.|...||..||+++++++|+|+..
T Consensus 253 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~ 292 (326)
T 2x7f_A 253 RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292 (326)
T ss_dssp CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence 1233556777888899999999999999999864
No 159
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.4e-40 Score=342.69 Aligned_cols=233 Identities=25% Similarity=0.395 Sum_probs=196.4
Q ss_pred HhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
..++|++.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+.+++.++||||+++++++. .+..++||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 346788999999999999999999889999999997543 23568999999999999999999999986 56689999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.++++... ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 262 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp CCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred eecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 9999999999997542 22489999999999999999999999 9999999999999999999999999999876432
Q ss_pred CC-CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------cccccccc
Q 035761 473 SS-NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSSLDKN 532 (560)
Q Consensus 473 ~~-~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~~~~~ 532 (560)
.. ......+++.|+|||++....++.++|||||||++|||++ |+.||..... ....+.++
T Consensus 338 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l 417 (454)
T 1qcf_A 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNI 417 (454)
T ss_dssp HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHH
T ss_pred ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 11 1122346788999999999999999999999999999999 9999975432 11234556
Q ss_pred cccccccCCCCCCChhHHHhh
Q 035761 533 IKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 533 ~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+..|...||..||++++++..
T Consensus 418 i~~cl~~dp~~RPt~~~i~~~ 438 (454)
T 1qcf_A 418 MMRCWKNRPEERPTFEYIQSV 438 (454)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHccCChhHCcCHHHHHHH
Confidence 677788899999999888753
No 160
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.6e-40 Score=316.32 Aligned_cols=229 Identities=20% Similarity=0.283 Sum_probs=194.9
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC--CEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE--KCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|++. ++.||||+++.........+.+.+|+.++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56889999999999999999985 88999999987654445567899999999999999999999999887 6789999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPP--ILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||+++|+|.+++..... ..+++.++..++.|++.||+|||+. + ++||||||+||+++.++.++++|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 99999999999986432 3489999999999999999999998 7 9999999999999999999999999876533
Q ss_pred CCCCCceeeccccCccCccccccCccCc---chhHHHHHHHHHHHHhCCCCCCcccc-------------------cccc
Q 035761 471 YDSSNRTLLAGTYGSIAPELAYTMVVTE---KYDVYSFGVVALEVLMGKHPGELLSS-------------------SSSS 528 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~~~~~~~---~~Dv~s~G~il~el~~g~~P~~~~~~-------------------~~~~ 528 (560)
.. ...||+.|+|||++.+..++. ++||||||+++|||++|+.||..... ....
T Consensus 165 ~~-----~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (271)
T 3kmu_A 165 SP-----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPH 239 (271)
T ss_dssp CT-----TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHH
T ss_pred cc-----CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHH
Confidence 22 235789999999998766555 79999999999999999999975432 1223
Q ss_pred cccccccccccCCCCCCChhHHHhh
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.+.++.|...||..||+++++++.
T Consensus 240 ~~~li~~~l~~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 240 VSKLMKICMNEDPAKRPKFDMIVPI 264 (271)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 4556677788899999999888764
No 161
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.7e-39 Score=317.42 Aligned_cols=229 Identities=19% Similarity=0.238 Sum_probs=195.7
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+.+++.+ +|+|++++++++......++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 5789999999999999999985 5789999999865432 23577899999999 8999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc-----EEEeeecccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE-----AFVADFGIAR 467 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~~ 467 (560)
||+ +++|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 86 e~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp ECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred Eec-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 999 9999999986432 389999999999999999999999 9999999999999987776 9999999998
Q ss_pred ccCCCCC-------CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------
Q 035761 468 LLNYDSS-------NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------- 524 (560)
Q Consensus 468 ~~~~~~~-------~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------- 524 (560)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 239 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence 7654322 12345689999999999999999999999999999999999999986432
Q ss_pred ---------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 ---------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 ---------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.+..|...||..||+++++++.
T Consensus 240 ~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~ 277 (298)
T 1csn_A 240 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL 277 (298)
T ss_dssp SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 12245566677888899999999988764
No 162
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-39 Score=324.10 Aligned_cols=237 Identities=26% Similarity=0.356 Sum_probs=194.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh------hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET------ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK 386 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 386 (560)
.++|++.+.||+|+||.||+|... +++.||||.+..... .......+.+|+++++.++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999865 578999999875431 1122345789999999999999999999987665
Q ss_pred EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc---EEEeee
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE---AFVADF 463 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Df 463 (560)
.++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred -eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 899999999999999987643 389999999999999999999999 9999999999999987654 999999
Q ss_pred ccccccCCCCCCceeeccccCccCccccc---cCccCcchhHHHHHHHHHHHHhCCCCCCccccc---------------
Q 035761 464 GIARLLNYDSSNRTLLAGTYGSIAPELAY---TMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------- 525 (560)
Q Consensus 464 g~~~~~~~~~~~~~~~~g~~~~~aPE~~~---~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------- 525 (560)
|+++..... .......|++.|+|||++. ...++.++||||||+++|||++|+.||......
T Consensus 162 g~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 240 (322)
T 2ycf_A 162 GHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240 (322)
T ss_dssp TTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCC
T ss_pred ccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccC
Confidence 999876422 1223346899999999874 566888999999999999999999999644321
Q ss_pred -------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 -------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 -------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||+++++++|+|+..
T Consensus 241 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 122445667788899999999999999999864
No 163
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=5.7e-40 Score=334.60 Aligned_cols=233 Identities=21% Similarity=0.243 Sum_probs=190.8
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC------EE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK------CM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~ 388 (560)
.+|+..+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+ ..
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 46889999999999999999988777899998864332 1236999999999999999999996543 37
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC-CCCcEEEeeecccc
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN-SEFEAFVADFGIAR 467 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~ 467 (560)
++||||++++.+............+++..+..++.||++||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 89999998754443332222233489999999999999999999999 999999999999999 78999999999998
Q ss_pred ccCCCCCCceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------------
Q 035761 468 LLNYDSSNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------- 524 (560)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------- 524 (560)
...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...+.
T Consensus 191 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 191 ILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp ECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 764332 23345689999999998765 589999999999999999999999975431
Q ss_pred ------------------------cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 525 ------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 525 ------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
....+.+.++.|...||..||++.++++|+|+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~ 326 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGS
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhh
Confidence 112344666778889999999999999999985
No 164
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.5e-40 Score=330.70 Aligned_cols=234 Identities=19% Similarity=0.284 Sum_probs=189.5
Q ss_pred hcCCcccceeeccCCeeEEEEEeCC------CcEEEEEEccchhhhhh---------hHHHHHHHHHHHhccCCCCccee
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPS------GKVVALKKLHRLETELA---------SLESFQNEARLLSQIRHRNIVKL 378 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l 378 (560)
.++|++.+.||+|+||.||+|.+.. ++.||||++........ ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3579999999999999999998764 47899999865432110 11234456667788899999999
Q ss_pred eeEEEeC----CEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC-
Q 035761 379 YGFCLHE----KCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN- 453 (560)
Q Consensus 379 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~- 453 (560)
++++... ...++||||+ +++|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9999775 4589999999 999999998643 2399999999999999999999999 999999999999999
Q ss_pred -CCCcEEEeeeccccccCCCCCC-------ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-
Q 035761 454 -SEFEAFVADFGIARLLNYDSSN-------RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS- 524 (560)
Q Consensus 454 -~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~- 524 (560)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999876432211 1334599999999999999999999999999999999999999985321
Q ss_pred ---------------------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 ---------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 ---------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+...++.|...||..||+++++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~ 323 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDI 323 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 12234566677888899999999888753
No 165
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.2e-40 Score=329.49 Aligned_cols=238 Identities=25% Similarity=0.377 Sum_probs=198.4
Q ss_pred HHhcCCcccceeeccCCeeEEEEEeCC------CcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEe
Q 035761 312 EATEDFDIKYCIGTGGYGSVYRARLPS------GKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLH 384 (560)
Q Consensus 312 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 384 (560)
...++|++.+.||+|+||.||+|.... ...||+|.+..... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH-ADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC-hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 345789999999999999999998642 24799999976432 23456789999999999 89999999999999
Q ss_pred CCEEEEEEeccCCCCHHHHhhcCCc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC
Q 035761 385 EKCMFLIYEYMEMGSLFCILRTDEE-----------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN 453 (560)
Q Consensus 385 ~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~ 453 (560)
++..++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence 9999999999999999999875321 23479999999999999999999999 999999999999999
Q ss_pred CCCcEEEeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc-----
Q 035761 454 SEFEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS----- 525 (560)
Q Consensus 454 ~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~----- 525 (560)
.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 278 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH
Confidence 9999999999999876433322 122456789999999999999999999999999999998 99999754321
Q ss_pred --------------ccccccccccccccCCCCCCChhHHHhh
Q 035761 526 --------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 526 --------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...+...++.|...||..||++.++++.
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 320 (333)
T 2i1m_A 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF 320 (333)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 1234566677888899999999998764
No 166
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.8e-39 Score=315.56 Aligned_cols=229 Identities=31% Similarity=0.492 Sum_probs=190.1
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhh-----hHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELA-----SLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 388 (560)
++|++.+.||+|+||.||+|+. .+++.||+|++........ ..+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5788999999999999999987 4689999999865432211 1267899999999999999999999997665
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeCCCCCCeEeCCCCc-----EEEe
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPP--ILHRDISSNNILLNSEFE-----AFVA 461 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~ 461 (560)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhcccC--CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 699999999999998875432 489999999999999999999998 8 999999999999988776 9999
Q ss_pred eeccccccCCCCCCceeeccccCccCcccc--ccCccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------
Q 035761 462 DFGIARLLNYDSSNRTLLAGTYGSIAPELA--YTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS-------------- 525 (560)
Q Consensus 462 Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~--~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~-------------- 525 (560)
|||+++.... ......|++.|+|||++ ....++.++||||+|+++|||++|+.||......
T Consensus 172 Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 248 (287)
T 4f0f_A 172 DFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248 (287)
T ss_dssp CCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCC
T ss_pred CCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCC
Confidence 9999975432 33445789999999998 4556788999999999999999999999754321
Q ss_pred -------ccccccccccccccCCCCCCChhHHHhh
Q 035761 526 -------SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 526 -------~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...+.+.++.|...||..||+++++++.
T Consensus 249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 283 (287)
T 4f0f_A 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283 (287)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 1124556677778899999998888764
No 167
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=321.21 Aligned_cols=229 Identities=28% Similarity=0.443 Sum_probs=186.9
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEec
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEY 394 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (560)
++|++.+.||+|+||.||+|++. ++.||||++.... ..+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES----ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT----HHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh----HHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 56888999999999999999985 7899999986432 34578899999999999999999998874 36899999
Q ss_pred cCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc-EEEeeeccccccCCCC
Q 035761 395 MEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE-AFVADFGIARLLNYDS 473 (560)
Q Consensus 395 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~~~~~~~~~ 473 (560)
+++|+|.+++........+++.++..++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 999999999987655445889999999999999999999932129999999999999998886 799999999765422
Q ss_pred CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------------cccccccc
Q 035761 474 SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------SSSLDKNI 533 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------~~~~~~~~ 533 (560)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ...+.+.+
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 237 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHH
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHH
Confidence 22345899999999999999999999999999999999999999754321 12344566
Q ss_pred ccccccCCCCCCChhHHHhh
Q 035761 534 KLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~ 553 (560)
..|...||..||+++++++.
T Consensus 238 ~~~l~~dp~~Rps~~ell~~ 257 (307)
T 2eva_A 238 TRCWSKDPSQRPSMEEIVKI 257 (307)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCChhhCcCHHHHHHH
Confidence 77888899999999998874
No 168
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.3e-39 Score=324.00 Aligned_cols=240 Identities=25% Similarity=0.337 Sum_probs=197.4
Q ss_pred HhcCCcccceeeccCCeeEEEEEe--CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc---CCCCcceeeeEEE----
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARL--PSGKVVALKKLHRLETELASLESFQNEARLLSQI---RHRNIVKLYGFCL---- 383 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 383 (560)
..++|++.+.||+|+||.||+|.. .+|+.||+|++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 346899999999999999999987 4678999999875443222223456777777766 8999999999987
Q ss_pred -eCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEee
Q 035761 384 -HEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVAD 462 (560)
Q Consensus 384 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 462 (560)
.....++||||++ |+|.+++..... ..+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence 4567899999998 699999976432 2389999999999999999999999 999999999999999999999999
Q ss_pred eccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc-----------------
Q 035761 463 FGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS----------------- 525 (560)
Q Consensus 463 fg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~----------------- 525 (560)
||+++...... ......|++.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 164 fg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 164 FGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242 (326)
T ss_dssp CCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred CcccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence 99998764322 233456899999999999999999999999999999999999999743311
Q ss_pred ---------------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ---------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ---------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||++.++++|+|+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 302 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence 111234556788889999999999999999853
No 169
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.1e-39 Score=324.27 Aligned_cols=232 Identities=24% Similarity=0.358 Sum_probs=190.8
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcE----EEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKV----VALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
++|+..+.||+|+||.||+|.+. +++. ||+|.+..... ....+.+.+|+.+++.++||||+++++++. ++..+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 56888999999999999999864 3443 78887754332 222345778999999999999999999986 45688
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGG--GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEEeCCCCCHHHHHHHccc--cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 99999999999999976532 389999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCC--CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------cccc
Q 035761 470 NYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSS 528 (560)
Q Consensus 470 ~~~~~--~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~ 528 (560)
..... ......++..|+|||++.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTID 245 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTT
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHH
Confidence 54332 2234567889999999999999999999999999999999 9999975432 1223
Q ss_pred cccccccccccCCCCCCChhHHHhh
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+...++.|...||..||++.+++++
T Consensus 246 ~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 246 VYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp TTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 4556677888899999999999876
No 170
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=332.81 Aligned_cols=234 Identities=24% Similarity=0.332 Sum_probs=195.6
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC--EEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK--CMFLI 391 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 391 (560)
++|.+.+.||+|+||.||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 56889999999999999999875 489999999975432 234567889999999999999999999998765 78999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe----CCCCcEEEeeecccc
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL----NSEFEAFVADFGIAR 467 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~~ 467 (560)
|||+++|+|.+++........+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999998765555599999999999999999999999 99999999999999 778889999999998
Q ss_pred ccCCCCCCceeeccccCccCcccccc--------CccCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------
Q 035761 468 LLNYDSSNRTLLAGTYGSIAPELAYT--------MVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS------------- 526 (560)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~aPE~~~~--------~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~------------- 526 (560)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 165 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 165 ELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp ECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred EccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 765332 2233568999999999875 567889999999999999999999996432110
Q ss_pred ---------------------------------cccccccccccccCCCCCCChhHHHhh
Q 035761 527 ---------------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 527 ---------------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
..+...++.|...||..||++++++.+
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 112345567788899999999998654
No 171
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5e-40 Score=323.49 Aligned_cols=241 Identities=27% Similarity=0.412 Sum_probs=183.0
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 468999999999999999999864 688999999865432 233457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcC-----CcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 393 EYMEMGSLFCILRTD-----EEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 393 e~~~~g~L~~~l~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
||+++|+|.+++... .....+++.++..++.||+.||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998641 1123489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-----CceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCccccc----------------
Q 035761 468 LLNYDSS-----NRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSSS---------------- 525 (560)
Q Consensus 468 ~~~~~~~-----~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~---------------- 525 (560)
....... ......|++.|+|||++.+ ..++.++||||||+++|||++|+.||......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc
Confidence 7643221 1233568999999999876 56889999999999999999999999753321
Q ss_pred -----------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 -----------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 -----------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||++.++++|+|+..
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 293 (303)
T 2vwi_A 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293 (303)
T ss_dssp -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC--
T ss_pred ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhc
Confidence 112334567788899999999999999999875
No 172
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-39 Score=318.10 Aligned_cols=232 Identities=26% Similarity=0.427 Sum_probs=184.9
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
.++|++.+.||+|+||.||+|+.. ..||||+++.........+.+.+|+++++.++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467999999999999999999864 3699999976655555667899999999999999999999965 4556899999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 100 WCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred ecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999997543 2389999999999999999999999 99999999999999999999999999998654321
Q ss_pred --CCceeeccccCccCccccc---cCccCcchhHHHHHHHHHHHHhCCCCCCccccc-----------------------
Q 035761 474 --SNRTLLAGTYGSIAPELAY---TMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS----------------------- 525 (560)
Q Consensus 474 --~~~~~~~g~~~~~aPE~~~---~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~----------------------- 525 (560)
.......||+.|+|||++. +..++.++||||||+++|||++|+.||......
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 254 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTS
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccC
Confidence 2223456899999999986 566888999999999999999999999754321
Q ss_pred ccccccccccccccCCCCCCChhHHHhh
Q 035761 526 SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 526 ~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...+.+.++.|...||..||+++++++.
T Consensus 255 ~~~l~~li~~~l~~~p~~Rps~~ell~~ 282 (289)
T 3og7_A 255 PKRMKRLMAECLKKKRDERPSFPRILAE 282 (289)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 1224556677788899999999988764
No 173
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.6e-40 Score=343.78 Aligned_cols=233 Identities=26% Similarity=0.398 Sum_probs=197.3
Q ss_pred hcCCcccceeeccCCeeEEEEEeCC-CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|.++. +..||||.++... ...+.|.+|+.++++++||||+++++++...+..++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 4568889999999999999998865 8899999997543 23567999999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.++++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 296 E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp ECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 99999999999986432 3489999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------ccccccc
Q 035761 473 SSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSSLDKN 532 (560)
Q Consensus 473 ~~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~~~~~ 532 (560)
... .....+++.|+|||++....++.++|||||||++|||++ |+.||...... ...+.++
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 451 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYEL 451 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 211 122345678999999999999999999999999999999 99999754321 1234456
Q ss_pred cccccccCCCCCCChhHHHhh
Q 035761 533 IKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 533 ~~~~~~~dp~~~p~~~~~~~~ 553 (560)
++.|...||..||++.++++.
T Consensus 452 i~~cl~~dP~~RPs~~el~~~ 472 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQA 472 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCcChhHCcCHHHHHHH
Confidence 677788899999999888764
No 174
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=336.31 Aligned_cols=236 Identities=25% Similarity=0.369 Sum_probs=180.9
Q ss_pred cCCcc-cceeeccCCeeEEEEEeC---CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe--CCEE
Q 035761 315 EDFDI-KYCIGTGGYGSVYRARLP---SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH--EKCM 388 (560)
Q Consensus 315 ~~~~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 388 (560)
+.|++ .+.||+|+||.||+|+++ +++.||||++..... ...+.+|+++++.++||||+++++++.. ....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 34555 457999999999999865 578999999975432 2357789999999999999999999965 6789
Q ss_pred EEEEeccCCCCHHHHhhcCC------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe----CCCCcE
Q 035761 389 FLIYEYMEMGSLFCILRTDE------EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL----NSEFEA 458 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~ 458 (560)
++||||+++ +|.+++.... ....+++.++..++.||+.||+|||+. +|+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence 999999975 8887775322 122489999999999999999999999 99999999999999 677899
Q ss_pred EEeeeccccccCCCC---CCceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCccccc---------
Q 035761 459 FVADFGIARLLNYDS---SNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------- 525 (560)
Q Consensus 459 kl~Dfg~~~~~~~~~---~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------- 525 (560)
||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||......
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 999999998764322 122345789999999998874 5899999999999999999999999643220
Q ss_pred -------------------------------------------------------ccccccccccccccCCCCCCChhHH
Q 035761 526 -------------------------------------------------------SSSLDKNIKLIDLLDPRLPPPGDQM 550 (560)
Q Consensus 526 -------------------------------------------------------~~~~~~~~~~~~~~dp~~~p~~~~~ 550 (560)
...+.+.++.|...||..||+++++
T Consensus 252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 1223345677889999999999999
Q ss_pred Hhhceeee
Q 035761 551 IRQGIILI 558 (560)
Q Consensus 551 ~~~~~~~~ 558 (560)
++|+|+..
T Consensus 332 L~hp~f~~ 339 (405)
T 3rgf_A 332 MQDPYFLE 339 (405)
T ss_dssp HTSGGGTS
T ss_pred hcChhhcc
Confidence 99999864
No 175
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.9e-39 Score=326.59 Aligned_cols=236 Identities=22% Similarity=0.358 Sum_probs=196.2
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC-----CE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE-----KC 387 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 387 (560)
.++|++.+.||+|+||.||+|... +|+.||||++..... ......+.+|+++++.++||||+++++++..+ ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK-PLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc-chHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 367899999999999999999875 688999999864332 23445788999999999999999999998764 67
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||++ |+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 899999997 5999998753 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC----------ceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccc------------
Q 035761 468 LLNYDSSN----------RTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------ 524 (560)
Q Consensus 468 ~~~~~~~~----------~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------ 524 (560)
........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 240 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Confidence 76432211 122468999999998764 6788999999999999999999999975431
Q ss_pred -------------------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -------------------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -------------------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||+.||+++++++|+|+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 1112335667788899999999999999999864
No 176
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.5e-39 Score=321.75 Aligned_cols=236 Identities=27% Similarity=0.396 Sum_probs=199.6
Q ss_pred hcCCcccceeeccCCeeEEEEEe------CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCC
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEK 386 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 386 (560)
.++|++.+.||+|+||.||+|.+ .+++.||||+++.... ....+.+.+|+.+++++ +||||+++++++..++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 46789999999999999999975 3467899999975432 23456789999999999 9999999999999999
Q ss_pred EEEEEEeccCCCCHHHHhhcCCc---------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeE
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEE---------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNIL 451 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 451 (560)
..++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +++||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 99999999999999999986532 12489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc----
Q 035761 452 LNSEFEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS---- 524 (560)
Q Consensus 452 l~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~---- 524 (560)
++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 999999999999999877543332 122456789999999999999999999999999999999 9999975432
Q ss_pred ---------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 ---------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 ---------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||+++++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 11234566677888899999999998875
No 177
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.4e-39 Score=316.72 Aligned_cols=233 Identities=27% Similarity=0.375 Sum_probs=182.9
Q ss_pred hcCCcccceeeccCCeeEEEEEeCC----CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
.++|++.+.||+|+||.||+|.... +..||+|.+..... ....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 3678899999999999999998643 45799999875432 234567899999999999999999999984 45688
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 9999999999999997643 2389999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------cccc
Q 035761 470 NYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSSL 529 (560)
Q Consensus 470 ~~~~~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~~ 529 (560)
...... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ...+
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 246 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHH
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence 533221 223446788999999998999999999999999999997 99999754321 1223
Q ss_pred ccccccccccCCCCCCChhHHHhh
Q 035761 530 DKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 530 ~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+.++.|...||..||++.+++++
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHH
Confidence 455667777888888888888764
No 178
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.7e-39 Score=315.68 Aligned_cols=238 Identities=25% Similarity=0.379 Sum_probs=202.7
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
..++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4568999999999999999999875 689999999976554444567889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC---CcEEEeeeccccc
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE---FEAFVADFGIARL 468 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~ 468 (560)
|||+++++|.+++.... .+++.++..++.||+.||+|||+. +++||||||+||+++.+ +.+||+|||++..
T Consensus 100 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 99999999999887543 389999999999999999999999 99999999999999754 4699999999987
Q ss_pred cCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------ccc
Q 035761 469 LNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSS 527 (560)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~ 527 (560)
..... ......|++.|+|||.+.+. ++.++||||||+++|||++|+.||..... ...
T Consensus 174 ~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (287)
T 2wei_A 174 FQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD 251 (287)
T ss_dssp BCCCS-SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCH
T ss_pred ecCCC-ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCH
Confidence 64332 22334689999999988764 88999999999999999999999964331 122
Q ss_pred ccccccccccccCCCCCCChhHHHhhceeee
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+.+.++.|...||..||+++++++++|+..
T Consensus 252 ~~~~li~~~l~~dp~~Rps~~ell~hp~~~~ 282 (287)
T 2wei_A 252 DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282 (287)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHSHHHHH
T ss_pred HHHHHHHHHcccChhhCcCHHHHhcCHHHhc
Confidence 3456677788899999999999999999753
No 179
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.5e-39 Score=323.07 Aligned_cols=236 Identities=26% Similarity=0.385 Sum_probs=197.4
Q ss_pred hcCCcccceeeccCCeeEEEEEeC--------CCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLH 384 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 384 (560)
.++|++.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+++++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 467899999999999999999863 467899999975432 34456788999999999 89999999999999
Q ss_pred CCEEEEEEeccCCCCHHHHhhcCCc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeE
Q 035761 385 EKCMFLIYEYMEMGSLFCILRTDEE-------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNIL 451 (560)
Q Consensus 385 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 451 (560)
++..++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 9999999999999999999986532 12489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc----
Q 035761 452 LNSEFEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS---- 524 (560)
Q Consensus 452 l~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~---- 524 (560)
++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 269 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence 999999999999999876533221 222346788999999999999999999999999999999 9999975432
Q ss_pred --------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 --------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 --------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||++++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 11234556677888899999999998875
No 180
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-39 Score=329.76 Aligned_cols=235 Identities=24% Similarity=0.277 Sum_probs=191.7
Q ss_pred HHhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC-----
Q 035761 312 EATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE----- 385 (560)
Q Consensus 312 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 385 (560)
...++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 3457899999999999999999976 5789999999865432 234799999999999999999998543
Q ss_pred ---------------------------------CEEEEEEeccCCCCHHHHhhcC-CcccCCCHHHHHHHHHHHHHHHHH
Q 035761 386 ---------------------------------KCMFLIYEYMEMGSLFCILRTD-EEAVGLDWTKRVNIVKGMAHALSY 431 (560)
Q Consensus 386 ---------------------------------~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~ 431 (560)
...++||||+++ +|.+.+... .....+++..+..++.||++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 348899999984 877766531 112348999999999999999999
Q ss_pred HHhcCCCCeEEeCCCCCCeEeC-CCCcEEEeeeccccccCCCCCCceeeccccCccCccccccC-ccCcchhHHHHHHHH
Q 035761 432 LHHHCTPPILHRDISSNNILLN-SEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVA 509 (560)
Q Consensus 432 LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il 509 (560)
||+. ||+||||||+||+++ .++.+||+|||+++...... ......||+.|+|||++.+. .++.++||||+||++
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9999 999999999999997 68899999999998764332 23345689999999998765 489999999999999
Q ss_pred HHHHhCCCCCCccccc----------------------------------------------ccccccccccccccCCCC
Q 035761 510 LEVLMGKHPGELLSSS----------------------------------------------SSSLDKNIKLIDLLDPRL 543 (560)
Q Consensus 510 ~el~~g~~P~~~~~~~----------------------------------------------~~~~~~~~~~~~~~dp~~ 543 (560)
|||++|+.||...... ...+.+.++.|...||..
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999999754321 112446677888999999
Q ss_pred CCChhHHHhhceee
Q 035761 544 PPPGDQMIRQGIIL 557 (560)
Q Consensus 544 ~p~~~~~~~~~~~~ 557 (560)
||++.++++|+|+.
T Consensus 313 R~t~~e~l~hp~f~ 326 (383)
T 3eb0_A 313 RINPYEAMAHPFFD 326 (383)
T ss_dssp SCCHHHHHTSGGGH
T ss_pred CCCHHHHhcCHHHH
Confidence 99999999999975
No 181
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.3e-39 Score=318.41 Aligned_cols=241 Identities=21% Similarity=0.310 Sum_probs=187.8
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 36789999999999999999986 46899999999765444444455666666788899999999999999999999999
Q ss_pred eccCCCCHHHHhhcC-CcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 393 EYMEMGSLFCILRTD-EEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 393 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
||+++ +|.+++... .....+++.++..++.|++.||+|||+.. +++||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99974 887777541 11234999999999999999999999842 899999999999999999999999999987643
Q ss_pred CCCCceeeccccCccCcccc----ccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------ccc
Q 035761 472 DSSNRTLLAGTYGSIAPELA----YTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SSS 527 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~----~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~~ 527 (560)
. .......||+.|+|||++ .+..++.++||||+|+++|||++|+.||..... ...
T Consensus 163 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 163 D-VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA 241 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCH
T ss_pred c-ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCH
Confidence 2 223334689999999995 566788999999999999999999999974321 122
Q ss_pred ccccccccccccCCCCCCChhHHHhhceeee
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+.+.+..|...||..||+++++++|+|+..
T Consensus 242 ~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~ 272 (290)
T 3fme_A 242 EFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272 (290)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence 3455677888999999999999999999853
No 182
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.6e-39 Score=321.41 Aligned_cols=239 Identities=23% Similarity=0.368 Sum_probs=197.9
Q ss_pred HhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC--CCCcceeeeEEEeCCEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIR--HRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~l 390 (560)
..++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ ||||+++++++..++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 34679999999999999999999888999999999765444455678899999999997 5999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||| +.+++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++...
T Consensus 106 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 999 56889999998654 389999999999999999999999 9999999999999964 899999999998764
Q ss_pred CCCCC--ceeeccccCccCcccccc-----------CccCcchhHHHHHHHHHHHHhCCCCCCcccc-------------
Q 035761 471 YDSSN--RTLLAGTYGSIAPELAYT-----------MVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------- 524 (560)
Q Consensus 471 ~~~~~--~~~~~g~~~~~aPE~~~~-----------~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------- 524 (560)
..... .....|++.|+|||++.+ ..++.++||||||+++|||++|+.||.....
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 257 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 257 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccc
Confidence 33221 233468999999999875 4678899999999999999999999975421
Q ss_pred -------cccccccccccccccCCCCCCChhHHHhhceeeec
Q 035761 525 -------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 525 -------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
....+.+.++.|...||..||+++++++++|+...
T Consensus 258 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 299 (313)
T 3cek_A 258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299 (313)
T ss_dssp CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence 11235566778889999999999999999998653
No 183
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.8e-39 Score=316.98 Aligned_cols=236 Identities=22% Similarity=0.308 Sum_probs=186.6
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLE-TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 5689999999999999999986 478999999987532 22344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCC-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 393 EYMEMGSLFCILRTDE-EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 9999999999986421 123489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cccccc
Q 035761 472 DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SSSSLD 530 (560)
Q Consensus 472 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~~~~~ 530 (560)
.........|++.|+|||++.+..++.++||||||+++|||++|+.||..... ....+.
T Consensus 189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (310)
T 2wqm_A 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHH
T ss_pred CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHH
Confidence 43334445689999999999999999999999999999999999999964321 122345
Q ss_pred cccccccccCCCCCCChhHHHhh
Q 035761 531 KNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 531 ~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.++.|...||..||+++++++.
T Consensus 269 ~li~~~l~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 269 QLVNMCINPDPEKRPDVTYVYDV 291 (310)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCChhhCCCHHHHHHH
Confidence 66677888899999999998865
No 184
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.5e-40 Score=326.18 Aligned_cols=241 Identities=23% Similarity=0.352 Sum_probs=200.9
Q ss_pred HHHHHhcCCcccceeeccCCeeEEEEEeC------CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEE
Q 035761 309 DMIEATEDFDIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFC 382 (560)
Q Consensus 309 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 382 (560)
++....++|++.+.||+|+||.||+|.+. +++.||||.+..... ......+.+|+.+++.++||||+++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 34445678999999999999999999764 367899999975432 23445788999999999999999999999
Q ss_pred EeCCEEEEEEeccCCCCHHHHhhcCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC
Q 035761 383 LHEKCMFLIYEYMEMGSLFCILRTDEE-------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE 455 (560)
Q Consensus 383 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 455 (560)
.+.+..++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCC
Confidence 999999999999999999999875321 13479999999999999999999999 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc--------
Q 035761 456 FEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS-------- 524 (560)
Q Consensus 456 ~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~-------- 524 (560)
+.+||+|||+++........ .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||.....
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 254 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH
Confidence 99999999999876433221 122346889999999999999999999999999999999 8999975432
Q ss_pred ----------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 ----------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 ----------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||++.+++++
T Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 255 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 11234566777888899999999999876
No 185
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.2e-39 Score=319.35 Aligned_cols=238 Identities=24% Similarity=0.337 Sum_probs=187.1
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC----CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCE-
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKC- 387 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~- 387 (560)
..++|.+.+.||+|+||.||+|... .++.||+|.++.........+.+.+|+.++++++||||+++++++...+.
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567889999999999999999754 34589999997654444556778999999999999999999999987653
Q ss_pred ----EEEEEeccCCCCHHHHhhcC---CcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEE
Q 035761 388 ----MFLIYEYMEMGSLFCILRTD---EEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFV 460 (560)
Q Consensus 388 ----~~lv~e~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 460 (560)
.++||||+++|+|.+++... .....+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 49999999999999998532 1234589999999999999999999999 9999999999999999999999
Q ss_pred eeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------
Q 035761 461 ADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------ 525 (560)
Q Consensus 461 ~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------ 525 (560)
+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 268 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL 268 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC
Confidence 999999876433221 223456789999999999999999999999999999999 99998754321
Q ss_pred ------ccccccccccccccCCCCCCChhHHHhh
Q 035761 526 ------SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 526 ------~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...+.+.+..|...||..||++.+++++
T Consensus 269 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 269 KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1234556677788899999999988765
No 186
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.9e-39 Score=319.24 Aligned_cols=233 Identities=22% Similarity=0.331 Sum_probs=192.9
Q ss_pred cCCcccceeeccCCeeEEEEEe-----CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC--CE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE--KC 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 387 (560)
+.|+..+.||+|+||.||+|++ .+++.||||++..... ....+.+.+|+++++.++||||+++++++..+ ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 4588899999999999999984 4688999999975442 34456789999999999999999999999876 56
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 8999999999999999965432 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccc---------------------
Q 035761 468 LLNYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLS--------------------- 523 (560)
Q Consensus 468 ~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~--------------------- 523 (560)
........ .....||..|+|||++.+..++.++||||+|+++|||++|+.|+....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 77543321 223457888999999999999999999999999999999998863221
Q ss_pred ------------ccccccccccccccccCCCCCCChhHHHhh
Q 035761 524 ------------SSSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 524 ------------~~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.....+.+.++.|...||..||+++++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 296 (302)
T 4e5w_A 255 TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEG 296 (302)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 112335567778888899999999988764
No 187
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-39 Score=314.39 Aligned_cols=231 Identities=28% Similarity=0.388 Sum_probs=197.5
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEec
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEY 394 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 394 (560)
++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 56888999999999999999998889999999976442 235788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC-
Q 035761 395 MEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS- 473 (560)
Q Consensus 395 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~- 473 (560)
+++++|.+++..... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp CTTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 999999999976532 389999999999999999999999 99999999999999999999999999998753211
Q ss_pred CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------cccccccccc
Q 035761 474 SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSSLDKNIK 534 (560)
Q Consensus 474 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~~~~~~~ 534 (560)
.......++..|+|||++.+..++.++||||+|+++|||++ |+.||..... ....+.+.++
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~ 239 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN 239 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHH
Confidence 11122346778999999998899999999999999999999 9999975432 1223455667
Q ss_pred cccccCCCCCCChhHHHhh
Q 035761 535 LIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 535 ~~~~~dp~~~p~~~~~~~~ 553 (560)
.|...||..||++.+++++
T Consensus 240 ~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 240 HCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHccCChhhCcCHHHHHHH
Confidence 7888899999999998875
No 188
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.1e-39 Score=338.56 Aligned_cols=232 Identities=27% Similarity=0.403 Sum_probs=190.9
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
.++|++.+.||+|+||.||+|.++++..||||+++.... ..+.|.+|++++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 467888999999999999999998888999999975432 24578999999999999999999999876 66899999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 259 ~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 259 YMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 999999999997532 23489999999999999999999999 99999999999999999999999999998764322
Q ss_pred CC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------ccccccccc
Q 035761 474 SN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSSLDKNI 533 (560)
Q Consensus 474 ~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~~~~~~ 533 (560)
.. .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ....+.+.+
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li 414 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLM 414 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 21 223446789999999999999999999999999999999 9999975432 112245566
Q ss_pred ccccccCCCCCCChhHHHhh
Q 035761 534 KLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~ 553 (560)
..|...||..||+++++++.
T Consensus 415 ~~cl~~dP~~Rpt~~~l~~~ 434 (452)
T 1fmk_A 415 CQCWRKEPEERPTFEYLQAF 434 (452)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHH
Confidence 77788899999999888764
No 189
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=7.4e-39 Score=315.46 Aligned_cols=240 Identities=21% Similarity=0.261 Sum_probs=197.8
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhh--hhhHHHHHHHHHHHhccCCCCcceeeeEEE--eCCEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETE--LASLESFQNEARLLSQIRHRNIVKLYGFCL--HEKCM 388 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 388 (560)
.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+++++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 367999999999999999999874 6889999999765422 234567899999999999999999999985 34578
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
++||||++++ +.+++.... ...+++.++..++.||+.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999886 777776533 23489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--CceeeccccCccCccccccCc--cCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------ccc
Q 035761 469 LNYDSS--NRTLLAGTYGSIAPELAYTMV--VTEKYDVYSFGVVALEVLMGKHPGELLSS-----------------SSS 527 (560)
Q Consensus 469 ~~~~~~--~~~~~~g~~~~~aPE~~~~~~--~~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------------~~~ 527 (560)
...... ......|++.|+|||++.+.. ++.++||||||+++|||++|+.||..... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 238 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGP 238 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCH
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCH
Confidence 643222 223356899999999987644 47799999999999999999999975431 122
Q ss_pred ccccccccccccCCCCCCChhHHHhhceeee
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.+.+.++.|...||..||+++++++|+|+..
T Consensus 239 ~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 269 (305)
T 2wtk_C 239 PLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269 (305)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence 3566778888999999999999999999864
No 190
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=324.97 Aligned_cols=231 Identities=26% Similarity=0.321 Sum_probs=193.9
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCE------
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKC------ 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 387 (560)
++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56888999999999999999864 68999999997654444455678899999999999999999999987653
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||++ |+|.+++.. .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred EEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccccc
Confidence 499999997 588887753 289999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------------
Q 035761 468 LLNYDSSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------- 524 (560)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------- 524 (560)
..... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...+.
T Consensus 175 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (353)
T 3coi_A 175 HADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251 (353)
T ss_dssp C-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred CCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 75422 334568999999999877 6788999999999999999999999975431
Q ss_pred --------------------------cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 525 --------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 525 --------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
....+...++.|...||..||+++++++|+|+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~ 310 (353)
T 3coi_A 252 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310 (353)
T ss_dssp SCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred hhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence 122344566778889999999999999999985
No 191
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.8e-39 Score=316.20 Aligned_cols=233 Identities=24% Similarity=0.294 Sum_probs=183.8
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999865 688999999976542 233456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 99999999999997643 389999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc--------------------ccccc
Q 035761 472 DSS-NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------SSSLD 530 (560)
Q Consensus 472 ~~~-~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------~~~~~ 530 (560)
... ......|++.|+|||++.+..++.++||||||+++|||++|+.||...... ...+.
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 266 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFD 266 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHH
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHH
Confidence 321 223456899999999999999999999999999999999999999754321 12234
Q ss_pred cccccccccCCCCCC-ChhHHHh
Q 035761 531 KNIKLIDLLDPRLPP-PGDQMIR 552 (560)
Q Consensus 531 ~~~~~~~~~dp~~~p-~~~~~~~ 552 (560)
+.++.|...||..|| ++++++.
T Consensus 267 ~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 267 AVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHHhccCCHHHHHHhHHHHHH
Confidence 455666666777777 5555543
No 192
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.1e-39 Score=315.05 Aligned_cols=233 Identities=24% Similarity=0.356 Sum_probs=192.8
Q ss_pred hcCCcccc-eeeccCCeeEEEEEe---CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 314 TEDFDIKY-CIGTGGYGSVYRARL---PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 314 ~~~~~~~~-~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
.++|.+.+ .||+|+||.||+|.+ .+++.||||+++.........+.+.+|+.+++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 899999999999954 2468899999986554444567899999999999999999999999 566789
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++++|.+++..... +++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 94 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhCcC---CCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 99999999999999986543 89999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCc---eeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------ccc
Q 035761 470 NYDSSNR---TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSS 527 (560)
Q Consensus 470 ~~~~~~~---~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~ 527 (560)
....... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ...
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 247 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence 5433221 12345688999999998889999999999999999999 9999975432 123
Q ss_pred ccccccccccccCCCCCCChhHHHhh
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+.+.++.|...||..||++.++++.
T Consensus 248 ~l~~li~~~l~~dp~~Rps~~~l~~~ 273 (291)
T 1xbb_A 248 EMYDLMNLCWTYDVENRPGFAAVELR 273 (291)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 45667777888899999999988764
No 193
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=328.28 Aligned_cols=232 Identities=25% Similarity=0.403 Sum_probs=182.1
Q ss_pred CCcccceeeccCCeeEEEEEeC--CC--cEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe-CCEEEE
Q 035761 316 DFDIKYCIGTGGYGSVYRARLP--SG--KVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH-EKCMFL 390 (560)
Q Consensus 316 ~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~l 390 (560)
.|.+.+.||+|+||.||+|.+. ++ ..||||.++.... ....+.+.+|+.++++++||||+++++++.. ++..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC-SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 4667789999999999999863 22 3689999875432 3445689999999999999999999999765 457899
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+++|+|.++++.... .+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 169 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999976433 388999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCC----ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------cc
Q 035761 471 YDSSN----RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SS 527 (560)
Q Consensus 471 ~~~~~----~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~ 527 (560)
..... .....+++.|+|||++.+..++.++||||||+++|||++ |.+||...... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~ 323 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 323 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCH
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence 32211 223456789999999999999999999999999999999 77888654321 12
Q ss_pred ccccccccccccCCCCCCChhHHHhh
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+.+.+..|...||..||++++++++
T Consensus 324 ~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 324 PLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 24455677778899999999988765
No 194
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-39 Score=318.73 Aligned_cols=234 Identities=26% Similarity=0.400 Sum_probs=199.2
Q ss_pred HhcCCcccceeeccCCeeEEEEEeCC-CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
..++|++.+.||+|+||.||+|.... +..||+|.+.... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 45678999999999999999998764 7889999987543 2346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999999976432 3489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------cccccc
Q 035761 472 DSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSSLDK 531 (560)
Q Consensus 472 ~~~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~~~~ 531 (560)
.... .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ...+.+
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 243 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 243 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHH
Confidence 3322 222456788999999999999999999999999999999 99999754321 123456
Q ss_pred ccccccccCCCCCCChhHHHhh
Q 035761 532 NIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 532 ~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.++.|...||..||+++++++.
T Consensus 244 li~~~l~~dp~~Rps~~~~~~~ 265 (288)
T 3kfa_A 244 LMRACWQWNPSDRPSFAEIHQA 265 (288)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhCCChhhCcCHHHHHHH
Confidence 6677888899999999998764
No 195
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.6e-39 Score=321.17 Aligned_cols=233 Identities=19% Similarity=0.299 Sum_probs=198.0
Q ss_pred cCCcccceeeccCCeeEEEEEe--CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCC------CcceeeeEEEeCC
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL--PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHR------NIVKLYGFCLHEK 386 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~~~~~ 386 (560)
++|++.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+++++.++|+ +++++++++...+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD---RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC---chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 5799999999999999999986 368899999997543 2345678899999888665 4999999999999
Q ss_pred EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC------------
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS------------ 454 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~------------ 454 (560)
..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred cEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence 999999999 8899999976542 3489999999999999999999999 9999999999999987
Q ss_pred -------CCcEEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccccc-
Q 035761 455 -------EFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS- 526 (560)
Q Consensus 455 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~- 526 (560)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...+...
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDE---HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTS---CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred cccccccCCCceEeeCcccccCcc---ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 66899999999987542 2234568999999999999999999999999999999999999997543210
Q ss_pred ------------------------------------------------------------cccccccccccccCCCCCCC
Q 035761 527 ------------------------------------------------------------SSLDKNIKLIDLLDPRLPPP 546 (560)
Q Consensus 527 ------------------------------------------------------------~~~~~~~~~~~~~dp~~~p~ 546 (560)
..+.+.++.|...||..||+
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 322 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence 12336677888999999999
Q ss_pred hhHHHhhceeee
Q 035761 547 GDQMIRQGIILI 558 (560)
Q Consensus 547 ~~~~~~~~~~~~ 558 (560)
++++++|+|+..
T Consensus 323 ~~ell~hp~f~~ 334 (339)
T 1z57_A 323 LREALKHPFFDL 334 (339)
T ss_dssp HHHHTTSGGGGG
T ss_pred HHHHhcCHHHHH
Confidence 999999999864
No 196
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.3e-39 Score=326.88 Aligned_cols=243 Identities=19% Similarity=0.201 Sum_probs=186.4
Q ss_pred HHHHHHhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC
Q 035761 308 QDMIEATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK 386 (560)
Q Consensus 308 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 386 (560)
.......++|++.+.||+|+||.||+|... +|+.||||++..... ....+.+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 445566789999999999999999999874 689999998865332 1234567888888899999999999997643
Q ss_pred E-------EEEEEeccCCCCHHHHhhc-CCcccCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEEeCCCCCCeEeCC-C
Q 035761 387 C-------MFLIYEYMEMGSLFCILRT-DEEAVGLDWTKRVNIVKGMAHALSYLH--HHCTPPILHRDISSNNILLNS-E 455 (560)
Q Consensus 387 ~-------~~lv~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~dlk~~Nill~~-~ 455 (560)
. .++||||+++ ++.+.+.. ......+++..+..++.|++.|++||| +. +|+||||||+||+++. +
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 3 7899999987 44433321 122334899999999999999999999 77 9999999999999996 8
Q ss_pred CcEEEeeeccccccCCCCCCceeeccccCccCccccccCc-cCcchhHHHHHHHHHHHHhCCCCCCccccc---------
Q 035761 456 FEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMV-VTEKYDVYSFGVVALEVLMGKHPGELLSSS--------- 525 (560)
Q Consensus 456 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~-~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------- 525 (560)
+.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 169 ~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp TEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred CcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 999999999998765332 233456899999999986654 899999999999999999999999754321
Q ss_pred ----------------------------------------ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ----------------------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ----------------------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||++.++++|+|+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 320 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence 123456778888999999999999999999864
No 197
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=7e-39 Score=317.45 Aligned_cols=229 Identities=22% Similarity=0.322 Sum_probs=194.0
Q ss_pred CcccceeeccCCeeEEEEEeC-----CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC--CEEE
Q 035761 317 FDIKYCIGTGGYGSVYRARLP-----SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE--KCMF 389 (560)
Q Consensus 317 ~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 389 (560)
|++.+.||+|+||.||++.+. +++.||||+++.... ....+.+.+|++++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC-hHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 488999999999999998653 578999999976432 34456789999999999999999999999884 6789
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++|+|.+++.... +++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 112 lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 9999999999999997643 89999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc----------------------
Q 035761 470 NYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------- 524 (560)
Q Consensus 470 ~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------- 524 (560)
...... .....++..|+|||++.+..++.++||||+|+++|||++|+.||.....
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL 264 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence 543321 2234578889999999999999999999999999999999999864321
Q ss_pred -----------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 -----------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 -----------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||+++++++.
T Consensus 265 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 304 (318)
T 3lxp_A 265 ERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPI 304 (318)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 12235567778888899999999998864
No 198
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.8e-39 Score=315.01 Aligned_cols=228 Identities=25% Similarity=0.396 Sum_probs=192.6
Q ss_pred cCCcccceeeccCCeeEEEEEeCC-C-------cEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPS-G-------KVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK 386 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 386 (560)
++|.+.+.||+|+||.||+|.... + ..||+|.+.... ....+.+.+|+++++.++||||+++++++..++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 578899999999999999997643 3 479999986543 344567899999999999999999999999999
Q ss_pred EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc--------E
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE--------A 458 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~ 458 (560)
..++||||+++|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CCEEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccccee
Confidence 99999999999999999986533 389999999999999999999999 9999999999999998887 9
Q ss_pred EEeeeccccccCCCCCCceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhC-CCCCCcccc------------
Q 035761 459 FVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMG-KHPGELLSS------------ 524 (560)
Q Consensus 459 kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g-~~P~~~~~~------------ 524 (560)
||+|||++..... .....|++.|+|||++.+ ..++.++||||||+++|||++| ..||.....
T Consensus 161 kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (289)
T 4fvq_A 161 KLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ 236 (289)
T ss_dssp EECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC
T ss_pred eeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCC
Confidence 9999999876432 233458899999999987 7789999999999999999995 455543221
Q ss_pred ----cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 ----SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 ----~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||++++++++
T Consensus 237 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 237 LPAPKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 22345667788888899999999999876
No 199
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.3e-39 Score=332.79 Aligned_cols=232 Identities=24% Similarity=0.289 Sum_probs=188.2
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC------CE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE------KC 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 387 (560)
.+|+..+.||+|+||.||+|++. +|+.||||++..... ...+|+++++.++||||+++++++... ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 46888999999999999999875 589999999865331 234799999999999999999998642 23
Q ss_pred EEEEEeccCCCCHHHHhhcC-CcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC-CcEEEeeecc
Q 035761 388 MFLIYEYMEMGSLFCILRTD-EEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE-FEAFVADFGI 465 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~ 465 (560)
.++||||+++ ++.+.+... .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999986 565555421 1223489999999999999999999999 99999999999999965 5689999999
Q ss_pred ccccCCCCCCceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCccccc-------------------
Q 035761 466 ARLLNYDSSNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLSSS------------------- 525 (560)
Q Consensus 466 ~~~~~~~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~------------------- 525 (560)
++.+.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......
T Consensus 204 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 204 AKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred hhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 98764332 23345689999999998765 7899999999999999999999999754310
Q ss_pred ---------------------------ccccccccccccccCCCCCCChhHHHhhceee
Q 035761 526 ---------------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 526 ---------------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
...+.++++.|...||..||++.+++.|+|+.
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~ 341 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 341 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhc
Confidence 12234556778888999999999999999974
No 200
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-39 Score=312.98 Aligned_cols=232 Identities=24% Similarity=0.343 Sum_probs=193.0
Q ss_pred cCCcccc-eeeccCCeeEEEEEeC---CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEE
Q 035761 315 EDFDIKY-CIGTGGYGSVYRARLP---SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 315 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 390 (560)
++|.+.+ .||+|+||.||+|.+. ++..||||+++... .....+.+.+|+++++.++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4566665 8999999999999753 57889999997643 234456789999999999999999999999 4556899
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 999999999999997543 2389999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------cccc
Q 035761 471 YDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSS 528 (560)
Q Consensus 471 ~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~ 528 (560)
..... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE 241 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHH
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHH
Confidence 33221 122346789999999998899999999999999999998 9999975432 1123
Q ss_pred cccccccccccCCCCCCChhHHHhh
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.+.++.|...||..||++.+++++
T Consensus 242 l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 242 LYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHH
Confidence 4456677788899999999988876
No 201
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=316.81 Aligned_cols=234 Identities=26% Similarity=0.375 Sum_probs=188.5
Q ss_pred HHHHhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc--CCCCcceeeeEEEeC--
Q 035761 310 MIEATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQI--RHRNIVKLYGFCLHE-- 385 (560)
Q Consensus 310 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~-- 385 (560)
.....++|++.+.||+|+||.||+|+.. ++.||||++..... ..+.+|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~-----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE-----ASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH-----HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc-----chhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 3344578999999999999999999985 89999999864332 2445566666654 999999999999887
Q ss_pred --CEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEeCCCCCCeEeCCCCcE
Q 035761 386 --KCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHC-----TPPILHRDISSNNILLNSEFEA 458 (560)
Q Consensus 386 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~ 458 (560)
...++||||+++|+|.++++.. .+++.++..++.|++.||+|||+.. +++|+||||||+||+++.++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 7899999999999999999754 2899999999999999999999751 3489999999999999999999
Q ss_pred EEeeeccccccCCCCCCc----eeeccccCccCccccccCccCcc------hhHHHHHHHHHHHHhC----------CCC
Q 035761 459 FVADFGIARLLNYDSSNR----TLLAGTYGSIAPELAYTMVVTEK------YDVYSFGVVALEVLMG----------KHP 518 (560)
Q Consensus 459 kl~Dfg~~~~~~~~~~~~----~~~~g~~~~~aPE~~~~~~~~~~------~Dv~s~G~il~el~~g----------~~P 518 (560)
||+|||+++.+....... ....||+.|+|||++.+...+.+ +|||||||++|||++| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999999998764332221 23468999999999988776665 9999999999999999 677
Q ss_pred CCcccccc-----------------------------cccccccccccccCCCCCCChhHHHhh
Q 035761 519 GELLSSSS-----------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 519 ~~~~~~~~-----------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
|....... ..+.+.++.|...||..||++++++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 65432110 113456677888899999999999876
No 202
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.7e-39 Score=323.67 Aligned_cols=240 Identities=21% Similarity=0.322 Sum_probs=195.2
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHH-HhccCCCCcceeeeEEEeCCEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARL-LSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
.++|++.+.||+|+||.||+|.. .+|+.||||++........ ...+..|..+ ++.++||||+++++++..++..++|
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH-HHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH-HHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 45788899999999999999986 4689999999976543322 2344455554 7788999999999999999999999
Q ss_pred EeccCCCCHHHHhhcC-CcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 392 YEYMEMGSLFCILRTD-EEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
|||+++ +|.+++... .....+++..+..++.||+.||+|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999985 998887642 11234899999999999999999999732 89999999999999999999999999998764
Q ss_pred CCCCCceeeccccCccCccccc----cCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------cc
Q 035761 471 YDSSNRTLLAGTYGSIAPELAY----TMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--------------------SS 526 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~~----~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--------------------~~ 526 (560)
.. .......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ..
T Consensus 206 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (340)
T 3an0_A 206 DS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS 284 (340)
T ss_dssp CH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSC
T ss_pred cc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCC
Confidence 21 1122346899999999964 34688999999999999999999999975321 12
Q ss_pred cccccccccccccCCCCCCChhHHHhhceeee
Q 035761 527 SSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 527 ~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
..+.+.+..|...||..||++.++++|+|+..
T Consensus 285 ~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 316 (340)
T 3an0_A 285 AEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 316 (340)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHHHHHHHHccCCcccCcCHHHHhcCcCccc
Confidence 23556677888999999999999999999753
No 203
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4e-39 Score=320.58 Aligned_cols=232 Identities=27% Similarity=0.369 Sum_probs=196.3
Q ss_pred cCCcccceeeccCCeeEEEEEe-----CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEE--eCCE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCL--HEKC 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 387 (560)
++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++. ....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 5789999999999999999984 468899999987543 234467899999999999999999999987 4567
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccce
Confidence 8999999999999999976432 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------
Q 035761 468 LLNYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------- 524 (560)
Q Consensus 468 ~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------- 524 (560)
........ .....+++.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 76533321 2234578889999999999999999999999999999999999853321
Q ss_pred -------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 -------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 -------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||++++++++
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 256 LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 12335667778888999999999999765
No 204
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=319.01 Aligned_cols=234 Identities=23% Similarity=0.303 Sum_probs=189.9
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEE----------
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCL---------- 383 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~---------- 383 (560)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 57889999999999999999876 48999999987543 344567889999999999999999999874
Q ss_pred ----eCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC-CCCcE
Q 035761 384 ----HEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN-SEFEA 458 (560)
Q Consensus 384 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~ 458 (560)
+....++||||++ |+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++ +++.+
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3467899999998 6999999643 389999999999999999999999 999999999999997 56799
Q ss_pred EEeeeccccccCCCCC---CceeeccccCccCcccccc-CccCcchhHHHHHHHHHHHHhCCCCCCcccc----------
Q 035761 459 FVADFGIARLLNYDSS---NRTLLAGTYGSIAPELAYT-MVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------- 524 (560)
Q Consensus 459 kl~Dfg~~~~~~~~~~---~~~~~~g~~~~~aPE~~~~-~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------- 524 (560)
||+|||+++....... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 240 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999987643211 1233457889999998765 6788999999999999999999999975432
Q ss_pred -------------------------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -------------------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -------------------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence 1233456677888999999999999999999853
No 205
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.7e-39 Score=313.40 Aligned_cols=232 Identities=28% Similarity=0.433 Sum_probs=195.7
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
.++|++.+.||+|+||.||+|...+++.||||.+..... ..+.+.+|+++++.++||||+++++++.. +..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 467899999999999999999998888999999875432 34578899999999999999999999864 45889999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS 473 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 473 (560)
|+++++|.+++.... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++.......
T Consensus 88 ~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 88 YMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp CCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred cCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 999999999997532 22489999999999999999999999 99999999999999999999999999998765322
Q ss_pred CC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------ccccccccc
Q 035761 474 SN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSSLDKNI 533 (560)
Q Consensus 474 ~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~~~~~~ 533 (560)
.. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ....+.+.+
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 243 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLM 243 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHH
Confidence 11 122346778999999998899999999999999999999 9999965432 122345667
Q ss_pred ccccccCCCCCCChhHHHhh
Q 035761 534 KLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.|...||..||+++++++.
T Consensus 244 ~~~l~~~p~~Rps~~~l~~~ 263 (279)
T 1qpc_A 244 RLCWKERPEDRPTFDYLRSV 263 (279)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhccChhhCCCHHHHHHH
Confidence 77888899999999988763
No 206
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.5e-38 Score=312.76 Aligned_cols=234 Identities=26% Similarity=0.459 Sum_probs=190.5
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe--------
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH-------- 384 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 384 (560)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+++++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE---EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH---HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 467999999999999999999864 78999999996532 334678899999999999999999999865
Q ss_pred -----CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEE
Q 035761 385 -----EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAF 459 (560)
Q Consensus 385 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 459 (560)
.+..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 356899999999999999998643 2378899999999999999999999 999999999999999999999
Q ss_pred EeeeccccccCCCC--------------CCceeeccccCccCccccccC-ccCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 035761 460 VADFGIARLLNYDS--------------SNRTLLAGTYGSIAPELAYTM-VVTEKYDVYSFGVVALEVLMGKHPGELLSS 524 (560)
Q Consensus 460 l~Dfg~~~~~~~~~--------------~~~~~~~g~~~~~aPE~~~~~-~~~~~~Dv~s~G~il~el~~g~~P~~~~~~ 524 (560)
|+|||++....... .......|++.|+|||++.+. .++.++||||+|+++|||++ ||.....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~ 233 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME 233 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh
Confidence 99999998764221 112334689999999998764 68899999999999999998 4431110
Q ss_pred ----------------------cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 ----------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 ----------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (303)
T 1zy4_A 234 RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289 (303)
T ss_dssp HHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred HHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence 1112456778888999999999999999999864
No 207
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=323.64 Aligned_cols=232 Identities=20% Similarity=0.226 Sum_probs=188.0
Q ss_pred cCCcccceeeccCCeeEEEEEeC----CCcEEEEEEccchhhhh---------hhHHHHHHHHHHHhccCCCCcceeeeE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRLETEL---------ASLESFQNEARLLSQIRHRNIVKLYGF 381 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~---------~~~~~~~~e~~~l~~l~h~niv~l~~~ 381 (560)
++|++.+.||+|+||.||+|... ++..||||++....... .....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57899999999999999999875 57889999987543211 112346788899999999999999999
Q ss_pred EEe----CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC-
Q 035761 382 CLH----EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF- 456 (560)
Q Consensus 382 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~- 456 (560)
+.. ....++||||+ +++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence 988 67899999999 999999998654 499999999999999999999999 999999999999998887
Q ss_pred -cEEEeeeccccccCCCCC-------CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc----
Q 035761 457 -EAFVADFGIARLLNYDSS-------NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---- 524 (560)
Q Consensus 457 -~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---- 524 (560)
.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 999999999987643221 11335689999999999999999999999999999999999999954211
Q ss_pred ------------------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 ------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 ------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.+..|...||..||+++++++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 322 (345)
T 2v62_A 270 VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI 322 (345)
T ss_dssp HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence 11245566778888999999999998865
No 208
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-39 Score=318.68 Aligned_cols=233 Identities=30% Similarity=0.395 Sum_probs=189.2
Q ss_pred cCCcccceeeccCCeeEEEEEeCC-----CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPS-----GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
++|...+.||+|+||.||+|.... +..||||.++.... ......+.+|+.+++.++||||+++++++...+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 467778999999999999997643 23599999875432 234457889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 123 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 9999999999999997643 2389999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------ccc
Q 035761 470 NYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSS 527 (560)
Q Consensus 470 ~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~ 527 (560)
...... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS 277 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBH
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCH
Confidence 533221 122345778999999999999999999999999999999 9999964331 112
Q ss_pred ccccccccccccCCCCCCChhHHHhh
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+.+.++.|...||..||++.++++.
T Consensus 278 ~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 278 AIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 34566677888899999999998765
No 209
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.5e-38 Score=311.90 Aligned_cols=231 Identities=17% Similarity=0.268 Sum_probs=190.2
Q ss_pred HhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEE-EeCCEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFC-LHEKCMFL 390 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 390 (560)
..++|++.+.||+|+||.||+|.. .+++.||||++...... +.+.+|+++++.++|++++..++++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 457899999999999999999986 57889999987643322 2477899999999988877777766 55678899
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe---CCCCcEEEeeecccc
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL---NSEFEAFVADFGIAR 467 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~ 467 (560)
||||+ +++|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEcc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 99999 9999999975332 389999999999999999999999 99999999999999 788999999999998
Q ss_pred ccCCCCC-------CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc---------------
Q 035761 468 LLNYDSS-------NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------- 525 (560)
Q Consensus 468 ~~~~~~~-------~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------- 525 (560)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS 236 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc
Confidence 7654322 123456899999999999999999999999999999999999999754321
Q ss_pred ----------ccccccccccccccCCCCCCChhHHHhh
Q 035761 526 ----------SSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 526 ----------~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...+.+.++.|...||..||+++++++.
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 274 (296)
T 4hgt_A 237 TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred chhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 2345566677888899999999988764
No 210
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=318.93 Aligned_cols=232 Identities=22% Similarity=0.409 Sum_probs=187.2
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCc----EEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGK----VVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
++|++.+.||+|+||.||+|.+. +++ +||+|.+.... .....+.+.+|+.+++.++||||+++++++..+. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 57899999999999999999864 344 35777775433 2344567899999999999999999999998765 78
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+|+||+++|+|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 99999999999999986533 389999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------cccc
Q 035761 470 NYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSS 528 (560)
Q Consensus 470 ~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~ 528 (560)
...... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 247 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHH
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHH
Confidence 433222 223446788999999999999999999999999999999 9999975432 1123
Q ss_pred cccccccccccCCCCCCChhHHHhh
Q 035761 529 LDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 529 ~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+...++.|...||..||+++++++.
T Consensus 248 l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 248 VYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4556677888899999999998874
No 211
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.4e-39 Score=318.74 Aligned_cols=242 Identities=24% Similarity=0.345 Sum_probs=199.9
Q ss_pred HHHHHHhcCCcccceeeccCCeeEEEEEe------CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeee
Q 035761 308 QDMIEATEDFDIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYG 380 (560)
Q Consensus 308 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~ 380 (560)
..+....++|++.+.||+|+||.||+|.+ .+++.||||+++.... ....+.+.+|+.+++++ +||||+++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 34444567899999999999999999974 3468899999976432 23446788999999999 7999999999
Q ss_pred EEEeCC-EEEEEEeccCCCCHHHHhhcCCc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCC
Q 035761 381 FCLHEK-CMFLIYEYMEMGSLFCILRTDEE-------------AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDIS 446 (560)
Q Consensus 381 ~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 446 (560)
++...+ ..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+|||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dik 175 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 175 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCc
Confidence 998755 48999999999999999986543 12278999999999999999999999 99999999
Q ss_pred CCCeEeCCCCcEEEeeeccccccCCCCCCc--eeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 035761 447 SNNILLNSEFEAFVADFGIARLLNYDSSNR--TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLS 523 (560)
Q Consensus 447 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~ 523 (560)
|+||+++.++.+||+|||+++......... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999999999999998765433222 23457889999999999999999999999999999998 999996543
Q ss_pred c-------------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 524 S-------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 524 ~-------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
. ....+.+.+..|...||..||++.+++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp CSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2 11234556667778899999999998876
No 212
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.4e-39 Score=344.88 Aligned_cols=226 Identities=25% Similarity=0.366 Sum_probs=188.4
Q ss_pred ceeeccCCeeEEEEEeC---CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEeccCC
Q 035761 321 YCIGTGGYGSVYRARLP---SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEM 397 (560)
Q Consensus 321 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 397 (560)
+.||+|+||.||+|.+. .++.||||+++.........+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 46789999998765545556789999999999999999999999965 457899999999
Q ss_pred CCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCCCC--
Q 035761 398 GSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-- 475 (560)
Q Consensus 398 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-- 475 (560)
|+|.+++..... +++.++..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 454 g~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhhCCC---CCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999976443 89999999999999999999999 9999999999999999999999999999876543221
Q ss_pred -ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------cccccccccc
Q 035761 476 -RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSSLDKNIKL 535 (560)
Q Consensus 476 -~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~~~~~~~~ 535 (560)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...+.++++.
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~ 607 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNL 607 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 222346788999999999999999999999999999998 99999754421 1234556677
Q ss_pred ccccCCCCCCChhHHHhh
Q 035761 536 IDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 536 ~~~~dp~~~p~~~~~~~~ 553 (560)
|...||..||+++++++.
T Consensus 608 cl~~dP~~RPs~~~l~~~ 625 (635)
T 4fl3_A 608 CWTYDVENRPGFAAVELR 625 (635)
T ss_dssp HTCSSTTTSCCHHHHHHH
T ss_pred HcCCCHhHCcCHHHHHHH
Confidence 888899999999988764
No 213
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9.9e-39 Score=326.69 Aligned_cols=234 Identities=22% Similarity=0.258 Sum_probs=194.5
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC--------CCCcceeeeEEE-
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIR--------HRNIVKLYGFCL- 383 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~- 383 (560)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE---HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC---cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 36799999999999999999975 468899999997543 23456789999999885 788999999987
Q ss_pred ---eCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCC----
Q 035761 384 ---HEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEF---- 456 (560)
Q Consensus 384 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---- 456 (560)
.....++||||+ ++++.+++.... ...+++.++..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 455789999999 567766665432 234899999999999999999999853 799999999999999775
Q ss_pred ---------------------------------------------cEEEeeeccccccCCCCCCceeeccccCccCcccc
Q 035761 457 ---------------------------------------------EAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELA 491 (560)
Q Consensus 457 ---------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~ 491 (560)
.+||+|||+++..... .....||+.|+|||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhh
Confidence 7999999999876432 2334689999999999
Q ss_pred ccCccCcchhHHHHHHHHHHHHhCCCCCCcccccc---------------------------------------------
Q 035761 492 YTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS--------------------------------------------- 526 (560)
Q Consensus 492 ~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~--------------------------------------------- 526 (560)
.+..++.++|||||||++|||++|+.||.......
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 99999999999999999999999999997433211
Q ss_pred --------------------cccccccccccccCCCCCCChhHHHhhceee
Q 035761 527 --------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 527 --------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
..+.+.++.|...||..||+++++++|+|+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 1133667788999999999999999999985
No 214
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.1e-38 Score=310.81 Aligned_cols=232 Identities=24% Similarity=0.392 Sum_probs=196.8
Q ss_pred HhcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe-------
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH------- 384 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 384 (560)
...+|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|+++++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 3467999999999999999999875 78999999987543 245689999999999999999998864
Q ss_pred ---------CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC
Q 035761 385 ---------EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE 455 (560)
Q Consensus 385 ---------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 455 (560)
....++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 345899999999999999997543 23489999999999999999999999 99999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------
Q 035761 456 FEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS----------- 524 (560)
Q Consensus 456 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~----------- 524 (560)
+.+||+|||++....... ......|++.|+|||++.+..++.++||||||+++|||++|..||.....
T Consensus 159 ~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIIS 237 (284)
T ss_dssp TEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCC
T ss_pred CCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhccccc
Confidence 999999999998765432 23345689999999999999999999999999999999999998743211
Q ss_pred --cccccccccccccccCCCCCCChhHHHhhce
Q 035761 525 --SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGI 555 (560)
Q Consensus 525 --~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~ 555 (560)
....+...++.|...||..||++.+++++.+
T Consensus 238 ~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 238 DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1223456678888999999999999998754
No 215
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9e-39 Score=310.98 Aligned_cols=233 Identities=27% Similarity=0.324 Sum_probs=191.4
Q ss_pred hcCCcccceeeccCCeeEEEEEeCC----CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
.++|.+.+.||+|+||.||+|.+.. +..||+|.+..... ....+.+.+|+.+++.++||||+++++++.++ ..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC-HHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC-chHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 3678899999999999999997543 34699999876432 23456789999999999999999999998654 568
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 89 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 9999999999999997643 2389999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------cccc
Q 035761 470 NYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSSL 529 (560)
Q Consensus 470 ~~~~~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~~ 529 (560)
...... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ...+
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVL 243 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHH
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHH
Confidence 533221 233456789999999998999999999999999999998 99999643321 1234
Q ss_pred ccccccccccCCCCCCChhHHHhh
Q 035761 530 DKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 530 ~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+.++.|...||..||++.+++.+
T Consensus 244 ~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 244 YTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHccCCchhCcCHHHHHHH
Confidence 566677888899999999998865
No 216
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.8e-38 Score=309.91 Aligned_cols=230 Identities=17% Similarity=0.262 Sum_probs=192.4
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEE-EeCCEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFC-LHEKCMFLI 391 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv 391 (560)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+.+++.++|++++..++++ ...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 46799999999999999999986 5789999999865432 23578999999999998877777666 556788999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe---CCCCcEEEeeeccccc
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL---NSEFEAFVADFGIARL 468 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~ 468 (560)
|||+ +++|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 84 ~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 9999 8999999975432 389999999999999999999999 99999999999999 4888999999999987
Q ss_pred cCCCCCC-------ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc-----------------
Q 035761 469 LNYDSSN-------RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS----------------- 524 (560)
Q Consensus 469 ~~~~~~~-------~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~----------------- 524 (560)
....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC
Confidence 6543321 2345689999999999999999999999999999999999999975432
Q ss_pred --------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 --------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 --------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||+++++++.
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 12234566677888899999999888764
No 217
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.4e-38 Score=312.46 Aligned_cols=233 Identities=25% Similarity=0.390 Sum_probs=190.4
Q ss_pred cCCcccceeeccCCeeEEEEEeCC----CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe-CCEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH-EKCMF 389 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~ 389 (560)
..|++.+.||+|+||.||+|...+ ...||+|.+..... ....+.+.+|+.++++++||||+++++++.. ++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC-HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 467888999999999999998643 23589999875432 3445678999999999999999999999754 55789
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 104 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 9999999999999997643 3389999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC----CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------c
Q 035761 470 NYDSS----NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------S 526 (560)
Q Consensus 470 ~~~~~----~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~ 526 (560)
..... ......+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||...... .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 258 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCC
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCC
Confidence 43221 1233457789999999999999999999999999999999 66666543321 2
Q ss_pred cccccccccccccCCCCCCChhHHHhh
Q 035761 527 SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 527 ~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
..+.+.++.|...||..||+++++++.
T Consensus 259 ~~l~~li~~~l~~~p~~Rps~~ell~~ 285 (298)
T 3f66_A 259 DPLYEVMLKCWHPKAEMRPSFSELVSR 285 (298)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 234566677888899999999988865
No 218
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=342.34 Aligned_cols=231 Identities=23% Similarity=0.318 Sum_probs=187.3
Q ss_pred CCcccc-eeeccCCeeEEEEEeC---CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 316 DFDIKY-CIGTGGYGSVYRARLP---SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 316 ~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
++.+.+ .||+|+||.||+|.++ ++..||||+++.... ....+.+.+|++++++++||||+++++++.. +..++|
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 344444 7999999999999764 466799999976432 2345789999999999999999999999976 568999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 414 ~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 99999999999997543 3489999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCc---eeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------cccc
Q 035761 472 DSSNR---TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSSL 529 (560)
Q Consensus 472 ~~~~~---~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~~ 529 (560)
..... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ...+
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l 568 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPEL 568 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHH
Confidence 32211 22335689999999999999999999999999999998 99999754421 1234
Q ss_pred ccccccccccCCCCCCChhHHHhh
Q 035761 530 DKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 530 ~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+++..|...||..||+++++++.
T Consensus 569 ~~li~~cl~~dP~~RPs~~~l~~~ 592 (613)
T 2ozo_A 569 YALMSDCWIYKWEDRPDFLTVEQR 592 (613)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHH
Confidence 555667778889999998887653
No 219
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=322.73 Aligned_cols=227 Identities=22% Similarity=0.263 Sum_probs=191.8
Q ss_pred cCCcccceeeccCCeeEEEEEeCC---------CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcce--------
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPS---------GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVK-------- 377 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-------- 377 (560)
++|++.+.||+|+||.||+|.... ++.||||.+... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 578999999999999999998763 789999998743 25778999999999999988
Q ss_pred -------eeeEEEe-CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCC
Q 035761 378 -------LYGFCLH-EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNN 449 (560)
Q Consensus 378 -------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~N 449 (560)
+++++.. ++..++||||+ +++|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+|
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 6777776 67899999999 999999998652 23499999999999999999999999 99999999999
Q ss_pred eEeCCCC--cEEEeeeccccccCCCCC-------CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCC
Q 035761 450 ILLNSEF--EAFVADFGIARLLNYDSS-------NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGE 520 (560)
Q Consensus 450 ill~~~~--~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~ 520 (560)
|+++.++ .+||+|||+++.+..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 899999999987643221 1233468999999999999999999999999999999999999998
Q ss_pred cccc----------------------------cccccccccccccccCCCCCCChhHHHhh
Q 035761 521 LLSS----------------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 521 ~~~~----------------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.... ....+.+.++.|...||..||+++++++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 330 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN 330 (352)
T ss_dssp GGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred cCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence 6531 12345566777888999999999998764
No 220
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.2e-38 Score=317.05 Aligned_cols=234 Identities=26% Similarity=0.425 Sum_probs=192.2
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcE--EEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKV--VALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 390 (560)
++|++.+.||+|+||.||+|... ++.. ||+|.+..... ....+.+.+|+++++++ +||||+++++++.+++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc-hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 56899999999999999999864 4554 49998875332 23445788999999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCC-------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc
Q 035761 391 IYEYMEMGSLFCILRTDE-------------EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE 457 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 457 (560)
||||+++|+|.+++.... ....+++.++..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997643 123589999999999999999999999 9999999999999999999
Q ss_pred EEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------
Q 035761 458 AFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------ 524 (560)
Q Consensus 458 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------ 524 (560)
+||+|||+++..... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 181 ~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~ 259 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259 (327)
T ss_dssp EEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred EEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence 999999999754322 12223356789999999998889999999999999999998 9999965431
Q ss_pred ------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 ------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 ------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||++++++++
T Consensus 260 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 260 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12234566677888899999999998875
No 221
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.1e-38 Score=318.29 Aligned_cols=233 Identities=24% Similarity=0.317 Sum_probs=173.1
Q ss_pred hcCCccc-ceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe----CCE
Q 035761 314 TEDFDIK-YCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH----EKC 387 (560)
Q Consensus 314 ~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~ 387 (560)
.++|.+. +.||+|+||.||+|..+ +++.||||++..... ...+....++.++||||+++++++.. +..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK------ARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH------HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH------HHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 4578885 46999999999999876 689999999865321 12223334566799999999999976 455
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC---CCcEEEeeec
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS---EFEAFVADFG 464 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg 464 (560)
.++||||+++|+|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 8999999999999999986532 3489999999999999999999999 9999999999999986 4559999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------- 524 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------- 524 (560)
+++.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 177 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (336)
T 3fhr_A 177 FAKETTQ--NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254 (336)
T ss_dssp TCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCT
T ss_pred cceeccc--cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCc
Confidence 9987542 223345689999999999999999999999999999999999999954332
Q ss_pred -----cccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 525 -----SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 525 -----~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
....+.+.++.|...||..||+++++++|+|+..
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 293 (336)
T 3fhr_A 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293 (336)
T ss_dssp TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence 1223455667788899999999999999999864
No 222
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=319.67 Aligned_cols=229 Identities=25% Similarity=0.370 Sum_probs=182.1
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHH--HhccCCCCcceeeeEEEe-----CCE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARL--LSQIRHRNIVKLYGFCLH-----EKC 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~-----~~~ 387 (560)
++|++.+.||+|+||.||+|+. +++.||||++..... +.+..|.++ +..++||||+++++++.. ...
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR-----QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH-----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch-----hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 6789999999999999999987 689999999875332 234445555 445899999999986643 235
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEEeCCCCCCeEeCCCCcEEEe
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHC------TPPILHRDISSNNILLNSEFEAFVA 461 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~~kl~ 461 (560)
.++||||+++|+|.+++.... .++.++..++.||++||+|||+.. .++|+||||||+|||++.++.+||+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 789999999999999997643 589999999999999999999762 3489999999999999999999999
Q ss_pred eeccccccCCCCC--------CceeeccccCccCcccccc-------CccCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 035761 462 DFGIARLLNYDSS--------NRTLLAGTYGSIAPELAYT-------MVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS 526 (560)
Q Consensus 462 Dfg~~~~~~~~~~--------~~~~~~g~~~~~aPE~~~~-------~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~ 526 (560)
|||+++.+..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987643221 1123468999999999887 456779999999999999999977764322110
Q ss_pred -------------------------------------------cccccccccccccCCCCCCChhHHHhh
Q 035761 527 -------------------------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 527 -------------------------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
..+.+.+..|...||..||+++++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHH
Confidence 024566778888899999999999543
No 223
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.6e-38 Score=321.54 Aligned_cols=200 Identities=25% Similarity=0.330 Sum_probs=169.2
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CC-----CcceeeeEEEeCC
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIR-HR-----NIVKLYGFCLHEK 386 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~ 386 (560)
.++|++.+.||+|+||.||+|... +++.||||+++... .....+..|+.+++.++ |+ +++++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH---HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 468999999999999999999865 57899999997533 22446677888888774 55 4999999999999
Q ss_pred EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC--CCCcEEEeeec
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN--SEFEAFVADFG 464 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfg 464 (560)
..++||||++ |+|.+++..... ..+++..+..++.|++.||+|||.. ..+|+||||||+|||++ .++.+||+|||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred ceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 9999999996 599999986532 2389999999999999999999952 22999999999999995 47889999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcc
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELL 522 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~ 522 (560)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 207 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 207 SSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99876432 23356899999999999999999999999999999999999999743
No 224
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.6e-38 Score=316.21 Aligned_cols=238 Identities=26% Similarity=0.290 Sum_probs=175.1
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHH-HHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEAR-LLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|+..+.||+|+||.||+|... +|+.||||++........ ...+..|.. +++.++||||+++++++..++..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKE-QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHH-HHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchH-HHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 57888999999999999999875 689999999976543322 334445555 777889999999999999999999999
Q ss_pred eccCCCCHHHHhhcC--CcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 393 EYMEMGSLFCILRTD--EEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 393 e~~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||+++ +|.+++... .....+++..+..++.|++.||+|||+.. +++||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99985 887777531 11234899999999999999999999842 89999999999999999999999999998764
Q ss_pred CCCCCceeeccccCccCcccc----ccCccCcchhHHHHHHHHHHHHhCCCCCCccccc---------------------
Q 035761 471 YDSSNRTLLAGTYGSIAPELA----YTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS--------------------- 525 (560)
Q Consensus 471 ~~~~~~~~~~g~~~~~aPE~~----~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~--------------------- 525 (560)
... ......|++.|+|||++ .+..++.++||||||+++|||++|+.||......
T Consensus 178 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3aln_A 178 DSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEER 256 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSC
T ss_pred ccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccc
Confidence 322 22334689999999998 4667889999999999999999999999754321
Q ss_pred --ccccccccccccccCCCCCCChhHHHhhceee
Q 035761 526 --SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 526 --~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
...+.+.++.|...||..||+++++++++|+.
T Consensus 257 ~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~ 290 (327)
T 3aln_A 257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL 290 (327)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHH
Confidence 11234566777888999999999999999975
No 225
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=317.47 Aligned_cols=241 Identities=20% Similarity=0.257 Sum_probs=193.6
Q ss_pred HHHhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhh----hhHHHHHHHHHHHhcc----CCCCcceeeeE
Q 035761 311 IEATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETEL----ASLESFQNEARLLSQI----RHRNIVKLYGF 381 (560)
Q Consensus 311 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l----~h~niv~l~~~ 381 (560)
....++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999986 468899999997543211 1223456789999888 89999999999
Q ss_pred EEeCCEEEEEEec-cCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC-CCCcEE
Q 035761 382 CLHEKCMFLIYEY-MEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN-SEFEAF 459 (560)
Q Consensus 382 ~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~k 459 (560)
+...+..++|+|| +++++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEE
Confidence 9999999999999 78999999997643 389999999999999999999999 999999999999999 889999
Q ss_pred EeeeccccccCCCCCCceeeccccCccCccccccCccC-cchhHHHHHHHHHHHHhCCCCCCcccc-----------ccc
Q 035761 460 VADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVT-EKYDVYSFGVVALEVLMGKHPGELLSS-----------SSS 527 (560)
Q Consensus 460 l~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~-~~~Dv~s~G~il~el~~g~~P~~~~~~-----------~~~ 527 (560)
|+|||+++..... ......|+..|+|||++.+..+. .++||||+|+++|||++|+.||..... ...
T Consensus 181 l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 258 (312)
T 2iwi_A 181 LIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSP 258 (312)
T ss_dssp ECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSCH
T ss_pred EEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCCH
Confidence 9999999876532 23345689999999998877665 489999999999999999999964321 233
Q ss_pred ccccccccccccCCCCCCChhHHHhhceeeec
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
.+.+.++.|...||..||+++++++|+|+...
T Consensus 259 ~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~ 290 (312)
T 2iwi_A 259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQTP 290 (312)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence 45677788899999999999999999998753
No 226
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=9.8e-39 Score=317.81 Aligned_cols=238 Identities=26% Similarity=0.346 Sum_probs=194.8
Q ss_pred hcCCcccceeeccCCeeEEEEEe------CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKC 387 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 387 (560)
.++|++.+.||+|+||.||+|.+ .+++.||||.+..... ......+.+|+.++++++||||+++++++...+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc-hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 36799999999999999999984 3467899999964432 2344578899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHhhcCCc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC---CCcEEE
Q 035761 388 MFLIYEYMEMGSLFCILRTDEE----AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS---EFEAFV 460 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl 460 (560)
.++||||+++|+|.+++..... ...+++.++..++.||+.||+|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999986532 13489999999999999999999999 9999999999999984 456999
Q ss_pred eeeccccccCCCCCC--ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc-------------
Q 035761 461 ADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------- 524 (560)
Q Consensus 461 ~Dfg~~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------- 524 (560)
+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~ 264 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 264 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC
Confidence 999999865332221 223457889999999999999999999999999999998 9999975432
Q ss_pred -----cccccccccccccccCCCCCCChhHHHhhce
Q 035761 525 -----SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGI 555 (560)
Q Consensus 525 -----~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~ 555 (560)
....+.+.++.|...||..||++++++++.+
T Consensus 265 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 265 DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1123456677788899999999999998754
No 227
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=313.56 Aligned_cols=235 Identities=24% Similarity=0.348 Sum_probs=191.7
Q ss_pred hcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe----CCEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH----EKCM 388 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 388 (560)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 36799999999999999999986 578999999986533 2345678899999999999999999999973 3478
Q ss_pred EEEEeccCCCCHHHHhhcCC-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 389 FLIYEYMEMGSLFCILRTDE-EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
++||||+++|+|.+++.... ....+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 99999999999999987521 123489999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCC---------ceeeccccCccCccccccCc---cCcchhHHHHHHHHHHHHhCCCCCCcccc-----------
Q 035761 468 LLNYDSSN---------RTLLAGTYGSIAPELAYTMV---VTEKYDVYSFGVVALEVLMGKHPGELLSS----------- 524 (560)
Q Consensus 468 ~~~~~~~~---------~~~~~g~~~~~aPE~~~~~~---~~~~~Dv~s~G~il~el~~g~~P~~~~~~----------- 524 (560)
........ .....|++.|+|||++.+.. ++.++||||||+++|||++|+.||.....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 262 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc
Confidence 65321111 11234689999999987554 68899999999999999999999954211
Q ss_pred ---------cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 ---------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 ---------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.++.|...||..||++++++++
T Consensus 263 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 263 QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 12235567778888899999999999876
No 228
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.9e-39 Score=340.93 Aligned_cols=233 Identities=27% Similarity=0.401 Sum_probs=195.6
Q ss_pred HhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
..++|++.+.||+|+||.||+|.++++..||||+++.... ..+.|.+|+++|++++||||+++++++.+ +..++||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 3467888999999999999999998888999999975432 24578999999999999999999999876 6689999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.++++... ...+++.++..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 341 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred ehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 9999999999997532 23389999999999999999999999 9999999999999999999999999999876422
Q ss_pred CC-CceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------cccccccc
Q 035761 473 SS-NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSSSLDKN 532 (560)
Q Consensus 473 ~~-~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~~~~~~ 532 (560)
.. ......++..|+|||++....++.++|||||||++|||++ |+.||..... ....+.++
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l 496 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 496 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 11 1122346788999999999999999999999999999999 9999975432 11234566
Q ss_pred cccccccCCCCCCChhHHHhh
Q 035761 533 IKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 533 ~~~~~~~dp~~~p~~~~~~~~ 553 (560)
++.|...||..||++++++..
T Consensus 497 i~~cl~~dP~~RPt~~~l~~~ 517 (535)
T 2h8h_A 497 MCQCWRKEPEERPTFEYLQAF 517 (535)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHHHH
Confidence 677788899999999888764
No 229
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.4e-40 Score=323.86 Aligned_cols=226 Identities=25% Similarity=0.344 Sum_probs=173.5
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhc--cCCCCcceeeeEEEeCC----EE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQ--IRHRNIVKLYGFCLHEK----CM 388 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~ 388 (560)
++|.+.+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++.. ++||||+++++++.... ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT-----HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc-----hhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 57899999999999999999875 8999999987532 3456778888887 79999999999998876 78
Q ss_pred EEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEeCCCCCCeEeCCCCcEEE
Q 035761 389 FLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLH--------HHCTPPILHRDISSNNILLNSEFEAFV 460 (560)
Q Consensus 389 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~kl 460 (560)
++||||+++|+|.+++... .+++.++..++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 77 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 9999999999999999754 2788999999999999999999 77 9999999999999999999999
Q ss_pred eeeccccccCCCCCC----ceeeccccCccCccccccC------ccCcchhHHHHHHHHHHHHhC----------CCCCC
Q 035761 461 ADFGIARLLNYDSSN----RTLLAGTYGSIAPELAYTM------VVTEKYDVYSFGVVALEVLMG----------KHPGE 520 (560)
Q Consensus 461 ~Dfg~~~~~~~~~~~----~~~~~g~~~~~aPE~~~~~------~~~~~~Dv~s~G~il~el~~g----------~~P~~ 520 (560)
+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++| ..||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 999999776433222 1234689999999998876 455689999999999999999 77775
Q ss_pred cccccc-----------------------------cccccccccccccCCCCCCChhHHHhh
Q 035761 521 LLSSSS-----------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 521 ~~~~~~-----------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
...... ..+.+.++.|...||..||+++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 291 (303)
T 3gxj_A 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred ccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 432110 023445667777899999998888764
No 230
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-38 Score=310.16 Aligned_cols=232 Identities=25% Similarity=0.372 Sum_probs=189.7
Q ss_pred CCcccceeeccCCeeEEEEEeCC-C---cEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEE-EE
Q 035761 316 DFDIKYCIGTGGYGSVYRARLPS-G---KVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCM-FL 390 (560)
Q Consensus 316 ~~~~~~~ig~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~l 390 (560)
.|...+.||+|+||.||+|.+.+ + ..||+|.+..... ....+.+.+|+.+++.++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 35556889999999999997532 2 3799999875432 34456789999999999999999999999876655 89
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+.+|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 101 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp EECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 999999999999997643 3389999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC----CCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCC-CCcccc------------------ccc
Q 035761 471 YDS----SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHP-GELLSS------------------SSS 527 (560)
Q Consensus 471 ~~~----~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P-~~~~~~------------------~~~ 527 (560)
... .......+++.|+|||.+.+..++.++||||||+++|||++|..| |..... ...
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD 255 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCH
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchH
Confidence 321 122334578899999999999999999999999999999995555 432221 122
Q ss_pred ccccccccccccCCCCCCChhHHHhh
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+.+.++.|...||..||++++++..
T Consensus 256 ~l~~li~~~l~~~p~~Rps~~~ll~~ 281 (298)
T 3pls_A 256 SLYQVMQQCWEADPAVRPTFRVLVGE 281 (298)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHH
Confidence 34566777888899999999988764
No 231
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=313.68 Aligned_cols=236 Identities=23% Similarity=0.312 Sum_probs=180.3
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 393 (560)
++|+..+.||+|+||.||+|... +|+.||||++..........+.+.++..+++.++||||+++++++..++..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 56888999999999999999875 68999999997654433444455666677888899999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHH-HCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
|+ ++.+..+..... ..+++..+..++.|+++||+|||+ . +++||||||+||+++.++.+||+|||++......
T Consensus 105 ~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 105 LM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 99 445555554322 238999999999999999999998 6 8999999999999999999999999999776432
Q ss_pred CCCceeeccccCccCccccc-----cCccCcchhHHHHHHHHHHHHhCCCCCCcccc---------------------cc
Q 035761 473 SSNRTLLAGTYGSIAPELAY-----TMVVTEKYDVYSFGVVALEVLMGKHPGELLSS---------------------SS 526 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~-----~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~---------------------~~ 526 (560)
.......|++.|+|||++. ...++.++||||||+++|||++|+.||..... ..
T Consensus 179 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (318)
T 2dyl_A 179 -KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFS 257 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCC
T ss_pred -ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCC
Confidence 2233456899999999984 55688899999999999999999999975321 12
Q ss_pred cccccccccccccCCCCCCChhHHHhhceee
Q 035761 527 SSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 527 ~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
..+...++.|...||..||+++++++|+|+.
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~ 288 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhCHHHH
Confidence 2355667788889999999999999999875
No 232
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6e-38 Score=314.22 Aligned_cols=235 Identities=24% Similarity=0.323 Sum_probs=193.5
Q ss_pred CHHHHHHHhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhc--cCCCCcceeeeEEE
Q 035761 306 TFQDMIEATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQ--IRHRNIVKLYGFCL 383 (560)
Q Consensus 306 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~ 383 (560)
++.......++|++.+.||+|+||.||+|+. +++.||||++.... .+.+.+|.+++.. ++||||+++++++.
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh-----HHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 3444445567899999999999999999998 58999999986432 3467788888887 79999999999998
Q ss_pred eCC----EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEeCCCCCCeE
Q 035761 384 HEK----CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLH--------HHCTPPILHRDISSNNIL 451 (560)
Q Consensus 384 ~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nil 451 (560)
... ..++||||+++|+|.+++... .+++.++..++.|++.||+||| +. +|+||||||+||+
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNIL 179 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEE
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEE
Confidence 876 789999999999999999754 2899999999999999999999 77 9999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCC----ceeeccccCccCccccccC------ccCcchhHHHHHHHHHHHHhC------
Q 035761 452 LNSEFEAFVADFGIARLLNYDSSN----RTLLAGTYGSIAPELAYTM------VVTEKYDVYSFGVVALEVLMG------ 515 (560)
Q Consensus 452 l~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~g~~~~~aPE~~~~~------~~~~~~Dv~s~G~il~el~~g------ 515 (560)
++.++.+||+|||++......... .....||+.|+|||++.+. .++.++||||||+++|||++|
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 999999999999999876543321 2334689999999998876 344689999999999999999
Q ss_pred ----CCCCCcccccc-----------------------------cccccccccccccCCCCCCChhHHHhh
Q 035761 516 ----KHPGELLSSSS-----------------------------SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 516 ----~~P~~~~~~~~-----------------------------~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.||....... ..+.+.++.|...||..||++.+++++
T Consensus 260 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 260 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred ccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 78886532110 023345666777899999999998876
No 233
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.1e-39 Score=318.67 Aligned_cols=238 Identities=23% Similarity=0.277 Sum_probs=200.7
Q ss_pred HhcCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhh----hhHHHHHHHHHHHhccC--CCCcceeeeEEEeC
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETEL----ASLESFQNEARLLSQIR--HRNIVKLYGFCLHE 385 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~ 385 (560)
..++|++.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|+.++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 346799999999999999999975 468899999987643211 12235668999999996 59999999999999
Q ss_pred CEEEEEEeccCC-CCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC-CCCcEEEeee
Q 035761 386 KCMFLIYEYMEM-GSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN-SEFEAFVADF 463 (560)
Q Consensus 386 ~~~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Df 463 (560)
+..++||||+.+ ++|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++ +++.+||+||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 999999999986 89999997643 389999999999999999999999 999999999999999 7899999999
Q ss_pred ccccccCCCCCCceeeccccCccCccccccCcc-CcchhHHHHHHHHHHHHhCCCCCCcccc-----------ccccccc
Q 035761 464 GIARLLNYDSSNRTLLAGTYGSIAPELAYTMVV-TEKYDVYSFGVVALEVLMGKHPGELLSS-----------SSSSLDK 531 (560)
Q Consensus 464 g~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~-~~~~Dv~s~G~il~el~~g~~P~~~~~~-----------~~~~~~~ 531 (560)
|+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... ....+.+
T Consensus 195 g~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 272 (320)
T 3a99_A 195 GSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 272 (320)
T ss_dssp TTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHH
T ss_pred ccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHHH
Confidence 999876532 2334568999999999887766 6789999999999999999999974432 2234567
Q ss_pred ccccccccCCCCCCChhHHHhhceeee
Q 035761 532 NIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 532 ~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
.++.|...||..||+++++++++|+..
T Consensus 273 li~~~l~~dp~~Rps~~~ll~hp~~~~ 299 (320)
T 3a99_A 273 LIRWCLALRPSDRPTFEEIQNHPWMQD 299 (320)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred HHHHHccCChhhCcCHHHHhcCHhhcC
Confidence 778889999999999999999999865
No 234
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=315.45 Aligned_cols=234 Identities=22% Similarity=0.297 Sum_probs=179.1
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CCCcceeeeEEE--------e
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIR-HRNIVKLYGFCL--------H 384 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~ 384 (560)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++++. ||||+++++++. .
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 57899999999999999999864 68999999986543 234457889999999995 999999999994 3
Q ss_pred CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEeCCCCCCeEeCCCCcEEEee
Q 035761 385 EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPP--ILHRDISSNNILLNSEFEAFVAD 462 (560)
Q Consensus 385 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~D 462 (560)
....++||||+. |+|.+++........+++.++..++.||+.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 345899999996 69999887533334599999999999999999999998 7 99999999999999999999999
Q ss_pred eccccccCCCCCC------------ceeeccccCccCcccc---ccCccCcchhHHHHHHHHHHHHhCCCCCCcccc---
Q 035761 463 FGIARLLNYDSSN------------RTLLAGTYGSIAPELA---YTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS--- 524 (560)
Q Consensus 463 fg~~~~~~~~~~~------------~~~~~g~~~~~aPE~~---~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~--- 524 (560)
||+++........ .....||+.|+|||++ .+..++.++||||||+++|||++|+.||.....
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 261 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI 261 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh
Confidence 9999876532221 1134589999999998 566788999999999999999999999964332
Q ss_pred ------------cccccccccccccccCCCCCCChhHHHhhc
Q 035761 525 ------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQG 554 (560)
Q Consensus 525 ------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~ 554 (560)
....+..+++.|...||..||++++++++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 262 VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303 (337)
T ss_dssp ----CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 112355667888899999999999998863
No 235
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.5e-38 Score=308.99 Aligned_cols=228 Identities=26% Similarity=0.395 Sum_probs=185.4
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeC-CEEEEEE
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHE-KCMFLIY 392 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 392 (560)
.++|++.+.||+|+||.||+|... |+.||||.++... ..+.+.+|+++++.++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 367899999999999999999874 8899999987533 345788999999999999999999997655 4689999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp CCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred ecCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 99999999999975432 2378999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCccccc------------------cccccccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS------------------SSSLDKNI 533 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~------------------~~~~~~~~ 533 (560)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ...+.+.+
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 247 (278)
T 1byg_A 171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM 247 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHH
T ss_pred ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHH
Confidence 223357889999999999999999999999999999998 99999754321 12344566
Q ss_pred ccccccCCCCCCChhHHHhh
Q 035761 534 KLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 534 ~~~~~~dp~~~p~~~~~~~~ 553 (560)
+.|...||..||++.++++.
T Consensus 248 ~~~l~~~p~~Rps~~~l~~~ 267 (278)
T 1byg_A 248 KNCWHLDAAMRPSFLQLREQ 267 (278)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCChhhCCCHHHHHHH
Confidence 77778889999998888764
No 236
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.4e-38 Score=316.18 Aligned_cols=234 Identities=21% Similarity=0.272 Sum_probs=196.1
Q ss_pred hcCCcccceeeccCCeeEEEEEeC-CC-cEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCC------cceeeeEEEeC
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLP-SG-KVVALKKLHRLETELASLESFQNEARLLSQIRHRN------IVKLYGFCLHE 385 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~ 385 (560)
.++|++.+.||+|+||.||+|... ++ +.||+|+++... ...+.+.+|+.+++.++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG---KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc---cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 367999999999999999999864 34 689999997533 23456788999999887665 89999999999
Q ss_pred CEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe-------------
Q 035761 386 KCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL------------- 452 (560)
Q Consensus 386 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill------------- 452 (560)
+..++||||+ ++++.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+||++
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred CeEEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 9999999999 6677777765432 3489999999999999999999999 99999999999999
Q ss_pred ------CCCCcEEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 035761 453 ------NSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSS 526 (560)
Q Consensus 453 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~ 526 (560)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHE---HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTS---CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred cccccccCCCcEEEeecCccccccc---cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5678999999999987432 2234568999999999999999999999999999999999999997543210
Q ss_pred -------------------------------------------------------------cccccccccccccCCCCCC
Q 035761 527 -------------------------------------------------------------SSLDKNIKLIDLLDPRLPP 545 (560)
Q Consensus 527 -------------------------------------------------------------~~~~~~~~~~~~~dp~~~p 545 (560)
..+.+.++.|...||..||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 1233667788899999999
Q ss_pred ChhHHHhhceeee
Q 035761 546 PGDQMIRQGIILI 558 (560)
Q Consensus 546 ~~~~~~~~~~~~~ 558 (560)
+++++++|+|+..
T Consensus 327 t~~e~l~hp~f~~ 339 (355)
T 2eu9_A 327 TLAEALLHPFFAG 339 (355)
T ss_dssp CHHHHTTSGGGGG
T ss_pred CHHHHhcChhhcC
Confidence 9999999999864
No 237
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=314.35 Aligned_cols=232 Identities=26% Similarity=0.377 Sum_probs=191.9
Q ss_pred cCCcccceeeccCCeeEEEEEe-----CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCC--E
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEK--C 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~ 387 (560)
++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++.++||||+++++++...+ .
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 5688899999999999999984 368899999987543 234567899999999999999999999987654 6
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||+++|+|.+++..... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eEEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 7999999999999999986532 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccc---------------------
Q 035761 468 LLNYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLS--------------------- 523 (560)
Q Consensus 468 ~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~--------------------- 523 (560)
........ .....++..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 77543321 122346778999999999889999999999999999999999876321
Q ss_pred -------------ccccccccccccccccCCCCCCChhHHHhh
Q 035761 524 -------------SSSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 524 -------------~~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.....+.+.++.|...||..||++.++++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~ 316 (326)
T 2w1i_A 274 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 316 (326)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 011234456667777888888888888754
No 238
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.1e-38 Score=327.17 Aligned_cols=233 Identities=23% Similarity=0.314 Sum_probs=183.0
Q ss_pred CCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEEEEec
Q 035761 316 DFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFLIYEY 394 (560)
Q Consensus 316 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 394 (560)
.|...+.||+|+||.||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+++..++||||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 345567899999999987766789999999986432 23567899999876 899999999999999999999999
Q ss_pred cCCCCHHHHhhcCCccc----CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCC-------------Cc
Q 035761 395 MEMGSLFCILRTDEEAV----GLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSE-------------FE 457 (560)
Q Consensus 395 ~~~g~L~~~l~~~~~~~----~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------~~ 457 (560)
+. |+|.+++....... ..++.++..++.||+.||+|||+. +|+||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 96 69999998653211 113335678999999999999999 99999999999999654 48
Q ss_pred EEEeeeccccccCCCCCC----ceeeccccCccCcccccc-------CccCcchhHHHHHHHHHHHHh-CCCCCCccccc
Q 035761 458 AFVADFGIARLLNYDSSN----RTLLAGTYGSIAPELAYT-------MVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS 525 (560)
Q Consensus 458 ~kl~Dfg~~~~~~~~~~~----~~~~~g~~~~~aPE~~~~-------~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~ 525 (560)
+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999887543221 223579999999999876 668899999999999999999 99999643211
Q ss_pred ----------------------ccccccccccccccCCCCCCChhHHHhhceee
Q 035761 526 ----------------------SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 526 ----------------------~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
...+.+.++.|...||..||++.++++|+|+.
T Consensus 247 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~ 300 (434)
T 2rio_A 247 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300 (434)
T ss_dssp HHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred HHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence 02345666778889999999999999999985
No 239
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3e-38 Score=320.37 Aligned_cols=234 Identities=21% Similarity=0.299 Sum_probs=194.0
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-----------CCCcceeeeEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIR-----------HRNIVKLYGFC 382 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~ 382 (560)
++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++++++ ||||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc---cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 5799999999999999999986 468999999997533 23456778999988876 89999999999
Q ss_pred EeCC----EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeC-----
Q 035761 383 LHEK----CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLN----- 453 (560)
Q Consensus 383 ~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~----- 453 (560)
...+ ..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||+.. +|+||||||+||+++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 8654 789999999 8899999976432 23899999999999999999999842 899999999999994
Q ss_pred -CCCcEEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc-------
Q 035761 454 -SEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS------- 525 (560)
Q Consensus 454 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~------- 525 (560)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred cCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 4457999999999876432 23346899999999999999999999999999999999999999744310
Q ss_pred ----------------------------------------------------------ccccccccccccccCCCCCCCh
Q 035761 526 ----------------------------------------------------------SSSLDKNIKLIDLLDPRLPPPG 547 (560)
Q Consensus 526 ----------------------------------------------------------~~~~~~~~~~~~~~dp~~~p~~ 547 (560)
...+.+.++.|...||..||++
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 1123466788899999999999
Q ss_pred hHHHhhceeee
Q 035761 548 DQMIRQGIILI 558 (560)
Q Consensus 548 ~~~~~~~~~~~ 558 (560)
+++++|+|+..
T Consensus 329 ~ell~hp~f~~ 339 (373)
T 1q8y_A 329 GGLVNHPWLKD 339 (373)
T ss_dssp HHHHTCGGGTT
T ss_pred HHHhhChhhhc
Confidence 99999999875
No 240
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.3e-38 Score=308.61 Aligned_cols=233 Identities=24% Similarity=0.355 Sum_probs=184.7
Q ss_pred cCCcccceeeccCCeeEEEEEeC--CCc--EEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP--SGK--VVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMF 389 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 389 (560)
++|++.+.||+|+||.||+|.+. +++ .||||+++.... .....+.+.+|+++++.++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57899999999999999999853 333 689998875432 2344567899999999999999999999998765 78
Q ss_pred EEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 390 LIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 390 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccc
Confidence 9999999999999997643 2389999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCC---ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc-------------------cc
Q 035761 470 NYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS-------------------SS 526 (560)
Q Consensus 470 ~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~-------------------~~ 526 (560)
...... .....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 251 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcC
Confidence 543322 123456778999999999889999999999999999999 9999965432 11
Q ss_pred cccccccccccccCCCCCCChhHHHhh
Q 035761 527 SSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 527 ~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
..+.+.++.|...||..||++.++++.
T Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 252 QDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 234566677788899999999998764
No 241
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=325.08 Aligned_cols=233 Identities=22% Similarity=0.324 Sum_probs=185.2
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEEEEe
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 393 (560)
.+|+..+.||+|+||.||.....+++.||||++...... .+.+|+++++.+ +||||+++++++.+....++|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 468888999999999966555567999999998653321 345799999999 89999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC-----CCcEEEeeeccccc
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS-----EFEAFVADFGIARL 468 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfg~~~~ 468 (560)
|++ |+|.+++..... .+++.++..++.||++||+|||+. +|+||||||+||+++. ...+||+|||+++.
T Consensus 99 ~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 996 599999986543 245556778999999999999999 9999999999999953 34588999999987
Q ss_pred cCCCC---CCceeeccccCccCccccc---cCccCcchhHHHHHHHHHHHHh-CCCCCCccccc----------------
Q 035761 469 LNYDS---SNRTLLAGTYGSIAPELAY---TMVVTEKYDVYSFGVVALEVLM-GKHPGELLSSS---------------- 525 (560)
Q Consensus 469 ~~~~~---~~~~~~~g~~~~~aPE~~~---~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~~---------------- 525 (560)
..... .......||+.|+|||++. ...++.++||||+||++|||++ |+.||......
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 252 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHP 252 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCc
Confidence 65332 1233457999999999987 4567779999999999999999 99999643211
Q ss_pred ----ccccccccccccccCCCCCCChhHHHhhceeee
Q 035761 526 ----SSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILI 558 (560)
Q Consensus 526 ----~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~ 558 (560)
...+.+.++.|...||..||+++++++|+|+..
T Consensus 253 ~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~ 289 (432)
T 3p23_A 253 EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289 (432)
T ss_dssp TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence 011345677888899999999999999999853
No 242
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.3e-37 Score=321.36 Aligned_cols=228 Identities=19% Similarity=0.286 Sum_probs=191.0
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCC-CCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLLSQIRH-RNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|.. .+++.||||++...... ..+.+|+++++.++| +++..+..++...+..++||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 5789999999999999999986 56899999987654322 247789999999976 55666666667788899999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEe---CCCCcEEEeeecccccc
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILL---NSEFEAFVADFGIARLL 469 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~ 469 (560)
||+ +++|.+++..... .+++.++..|+.||+.||+|||+. +||||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 e~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp ECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ECC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 999 9999999975332 399999999999999999999999 99999999999999 58899999999999876
Q ss_pred CCCCCC-------ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc------------------
Q 035761 470 NYDSSN-------RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS------------------ 524 (560)
Q Consensus 470 ~~~~~~-------~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~------------------ 524 (560)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS 236 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSC
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccccc
Confidence 543221 1245799999999999999999999999999999999999999976432
Q ss_pred -------cccccccccccccccCCCCCCChhHHHh
Q 035761 525 -------SSSSLDKNIKLIDLLDPRLPPPGDQMIR 552 (560)
Q Consensus 525 -------~~~~~~~~~~~~~~~dp~~~p~~~~~~~ 552 (560)
....+.+++..|...||..||+++++++
T Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 1223566677788899999999988765
No 243
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=313.26 Aligned_cols=233 Identities=21% Similarity=0.390 Sum_probs=190.3
Q ss_pred HhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 313 ATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 313 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
..++|++.+.||+|+||.||+|..++ .||+|+++.........+.+.+|+.++++++||||+++++++..++..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 34678999999999999999998754 4999998765433333456778999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++++|.+++.... ..+++.++..++.||+.||+|||+. +++||||||+||+++ ++.+||+|||+++.....
T Consensus 109 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp BCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred ecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 9999999999997643 3489999999999999999999999 999999999999998 679999999998765321
Q ss_pred -----CCCceeeccccCccCcccccc---------CccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------
Q 035761 473 -----SSNRTLLAGTYGSIAPELAYT---------MVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------- 524 (560)
Q Consensus 473 -----~~~~~~~~g~~~~~aPE~~~~---------~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------- 524 (560)
........|++.|+|||++.+ ..++.++||||||+++|||++|+.||.....
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 262 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN 262 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC
Confidence 122233458999999999874 4478899999999999999999999975431
Q ss_pred -----cccccccccccccccCCCCCCChhHHHhh
Q 035761 525 -----SSSSLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 525 -----~~~~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
....+.+.+..|...||..||+++++++.
T Consensus 263 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 296 (319)
T 2y4i_B 263 LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM 296 (319)
T ss_dssp CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 12345566677788899999999988865
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.9e-38 Score=334.96 Aligned_cols=238 Identities=26% Similarity=0.338 Sum_probs=195.9
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe------CCE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH------EKC 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 387 (560)
++|++.+.||+|+||.||+|... +|+.||||++.... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 67999999999999999999864 68999999987543 23445678999999999999999999998765 567
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCc---EEEeeec
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFE---AFVADFG 464 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 464 (560)
.++||||+++|+|.+++........+++.++..++.|++.||+|||+. ||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998765545589999999999999999999999 9999999999999997765 8999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------- 524 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------- 524 (560)
++....... ......|++.|+|||++.+..++.++||||+|+++|||++|+.||.....
T Consensus 170 ~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 170 YAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 998765332 33445789999999999999999999999999999999999999953200
Q ss_pred ---------------------cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 525 ---------------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 525 ---------------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
....+.+.++.|...||..||++.+++.|+|+.
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~ 302 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ 302 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHH
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHH
Confidence 011234556677888999999999999998853
No 245
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.9e-37 Score=333.26 Aligned_cols=235 Identities=27% Similarity=0.370 Sum_probs=191.4
Q ss_pred HHhcCCcccceeeccCCeeEEEEEeCC----CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCE
Q 035761 312 EATEDFDIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKC 387 (560)
Q Consensus 312 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 387 (560)
...++|++.+.||+|+||.||+|.+.. +..||||.++.... ....+.+.+|+.++++++||||+++++++. ++.
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 345678889999999999999998742 46799999875432 234467899999999999999999999985 456
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 899999999999999998643 2389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC-ceeeccccCccCccccccCccCcchhHHHHHHHHHHHHh-CCCCCCcccc------------------ccc
Q 035761 468 LLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLM-GKHPGELLSS------------------SSS 527 (560)
Q Consensus 468 ~~~~~~~~-~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~-g~~P~~~~~~------------------~~~ 527 (560)
........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ...
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 619 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 619 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCH
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccH
Confidence 76433222 223456789999999999999999999999999999997 9999975432 112
Q ss_pred ccccccccccccCCCCCCChhHHHhh
Q 035761 528 SLDKNIKLIDLLDPRLPPPGDQMIRQ 553 (560)
Q Consensus 528 ~~~~~~~~~~~~dp~~~p~~~~~~~~ 553 (560)
.+...+..|...||..||+++++++.
T Consensus 620 ~l~~li~~~l~~dP~~RPs~~el~~~ 645 (656)
T 2j0j_A 620 TLYSLMTKCWAYDPSRRPRFTELKAQ 645 (656)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 34556667778888888888888764
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.1e-36 Score=295.77 Aligned_cols=212 Identities=23% Similarity=0.343 Sum_probs=177.5
Q ss_pred cCCccc-ceeeccCCeeEEEEEe-CCCcEEEEEEccchhhhhhhHHHHHHHHHHH-hccCCCCcceeeeEEEe----CCE
Q 035761 315 EDFDIK-YCIGTGGYGSVYRARL-PSGKVVALKKLHRLETELASLESFQNEARLL-SQIRHRNIVKLYGFCLH----EKC 387 (560)
Q Consensus 315 ~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~ 387 (560)
++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 456666 7799999999999986 46899999998642 2456788887 55699999999999987 667
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC---CCcEEEeeec
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS---EFEAFVADFG 464 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg 464 (560)
.++||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 8999999999999999987532 3489999999999999999999999 9999999999999998 7889999999
Q ss_pred cccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc--------------------
Q 035761 465 IARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS-------------------- 524 (560)
Q Consensus 465 ~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~-------------------- 524 (560)
++.... +..++.++||||+|+++|||++|+.||.....
T Consensus 166 ~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (299)
T 3m2w_A 166 FAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 223 (299)
T ss_dssp TCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCH
T ss_pred cccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCc
Confidence 986542 23467789999999999999999999964321
Q ss_pred -----cccccccccccccccCCCCCCChhHHHhhceeeec
Q 035761 525 -----SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIILIS 559 (560)
Q Consensus 525 -----~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~~~ 559 (560)
....+...++.|...||..||+++++++|+|+..+
T Consensus 224 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263 (299)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred hhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence 12234556777889999999999999999998654
No 247
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=8e-38 Score=312.40 Aligned_cols=225 Identities=16% Similarity=0.182 Sum_probs=177.2
Q ss_pred hcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhh------hhhhHHHHHHHHHHHhccC---------CCCccee
Q 035761 314 TEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLET------ELASLESFQNEARLLSQIR---------HRNIVKL 378 (560)
Q Consensus 314 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~---------h~niv~l 378 (560)
.++|++.+.||+|+||.||+|+. +|+.||||++..... .....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999988 689999999976431 1223467888999988886 6666665
Q ss_pred eeEE-----------------Ee-------------CCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHH
Q 035761 379 YGFC-----------------LH-------------EKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHA 428 (560)
Q Consensus 379 ~~~~-----------------~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 428 (560)
.+++ .+ ++..++||||+++|++.+.+.. ..+++.++..++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 5543 32 6789999999999987776643 238999999999999999
Q ss_pred HHHHH-hcCCCCeEEeCCCCCCeEeCCCC--------------------cEEEeeeccccccCCCCCCceeeccccCccC
Q 035761 429 LSYLH-HHCTPPILHRDISSNNILLNSEF--------------------EAFVADFGIARLLNYDSSNRTLLAGTYGSIA 487 (560)
Q Consensus 429 l~~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~a 487 (560)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 8999999999876432 3479999999
Q ss_pred ccccccCccCcchhHHHHHHH-HHHHHhCCCCCCcccc-------------------------cccccccccccccccCC
Q 035761 488 PELAYTMVVTEKYDVYSFGVV-ALEVLMGKHPGELLSS-------------------------SSSSLDKNIKLIDLLDP 541 (560)
Q Consensus 488 PE~~~~~~~~~~~Dv~s~G~i-l~el~~g~~P~~~~~~-------------------------~~~~~~~~~~~~~~~dp 541 (560)
||++.+.. +.++||||+|++ .+++++|..||....+ .+..+.+.++.|...|
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d- 323 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS- 323 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-
Confidence 99998776 889999998777 7888999999864210 1122344445555544
Q ss_pred CCCCChhHHH-hhceee
Q 035761 542 RLPPPGDQMI-RQGIIL 557 (560)
Q Consensus 542 ~~~p~~~~~~-~~~~~~ 557 (560)
++++++ +|+|+.
T Consensus 324 ----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 324 ----SATDLLCQHSLFK 336 (336)
T ss_dssp ----SHHHHHHHCGGGC
T ss_pred ----CHHHHHhcCCCcC
Confidence 788888 788763
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-36 Score=330.37 Aligned_cols=227 Identities=24% Similarity=0.313 Sum_probs=189.3
Q ss_pred cCCcccceeeccCCeeEEEEEeC--CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCE-----
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP--SGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKC----- 387 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 387 (560)
++|++.+.||+|+||.||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC-HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 67999999999999999999875 589999999875332 2445678899999999999999999999987655
Q ss_pred EEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 388 MFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 388 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
.++||||+++++|.+++.. .+++.++..++.||+.||+|||+. +|+||||||+||+++.+ .+||+|||+++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 7999999999999988754 389999999999999999999999 99999999999999986 89999999998
Q ss_pred ccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccc-----------ccccccccccc
Q 035761 468 LLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSS-----------SSSLDKNIKLI 536 (560)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~-----------~~~~~~~~~~~ 536 (560)
..... ....||+.|+|||++.+.. +.++|||||||++|||++|..||...... ...+..++..|
T Consensus 230 ~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 304 (681)
T 2pzi_A 230 RINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRA 304 (681)
T ss_dssp ETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTCHHHHHCHHHHHHHHHH
T ss_pred hcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccccccccccccCHHHHHHHhhh
Confidence 76432 3456999999999987654 88999999999999999999987643211 12345677788
Q ss_pred cccCCCCCCChhHHHhhcee
Q 035761 537 DLLDPRLPPPGDQMIRQGII 556 (560)
Q Consensus 537 ~~~dp~~~p~~~~~~~~~~~ 556 (560)
...||..||+..+.+.+.|.
T Consensus 305 l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 305 IDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp TCSSGGGSCSSHHHHHHHHH
T ss_pred ccCChhhCCCHHHHHHHHHH
Confidence 88999999998888877653
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-36 Score=310.00 Aligned_cols=235 Identities=14% Similarity=0.115 Sum_probs=179.9
Q ss_pred cCCcccceeeccCCeeEEEEEe-CCCcEEEEEEccchh-hhhhhHHHHHHHHHHHhccCC-CCcceee---------eE-
Q 035761 315 EDFDIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRLE-TELASLESFQNEARLLSQIRH-RNIVKLY---------GF- 381 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h-~niv~l~---------~~- 381 (560)
..|...+.||+|+||.||+|.+ .+|+.||||++.... ......+.+.+|+.+++.++| +|..... ..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4577788999999999999985 468999999987433 222345678999999999987 3221111 11
Q ss_pred -----------EEe-----CCEEEEEEeccCCCCHHHHhhc----CCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 035761 382 -----------CLH-----EKCMFLIYEYMEMGSLFCILRT----DEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPIL 441 (560)
Q Consensus 382 -----------~~~-----~~~~~lv~e~~~~g~L~~~l~~----~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iv 441 (560)
... ....+++|+++ +++|.++++. ......+++..+..++.||++||+|||+. +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 111 12356777765 6799988842 11123488999999999999999999999 999
Q ss_pred EeCCCCCCeEeCCCCcEEEeeeccccccCCCCCCceeeccccCccCcccc----------ccCccCcchhHHHHHHHHHH
Q 035761 442 HRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELA----------YTMVVTEKYDVYSFGVVALE 511 (560)
Q Consensus 442 H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~----------~~~~~~~~~Dv~s~G~il~e 511 (560)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999875432 333467 999999998 66668889999999999999
Q ss_pred HHhCCCCCCcccc-------------cccccccccccccccCCCCCCChhHHHhhceee
Q 035761 512 VLMGKHPGELLSS-------------SSSSLDKNIKLIDLLDPRLPPPGDQMIRQGIIL 557 (560)
Q Consensus 512 l~~g~~P~~~~~~-------------~~~~~~~~~~~~~~~dp~~~p~~~~~~~~~~~~ 557 (560)
|++|+.||..... ....+.+.++.|...||..||++.++++++|+.
T Consensus 310 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~ 368 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 368 (413)
T ss_dssp HHHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred HHHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence 9999999975432 122345566778888999999999999998864
No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.5e-35 Score=286.82 Aligned_cols=175 Identities=13% Similarity=0.098 Sum_probs=153.2
Q ss_pred cCCcccceeeccCCeeEEEEEeC-CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEEE
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET-ELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 392 (560)
++|++.+.||+|+||.||+|... +++.||||++..... .....+.+.+|+..++.++||||+++++++..++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56999999999999999999875 489999999976542 2344567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||+++++|.++++.. ....++.+++.|++.||+|||+. ||+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 999999999999642 45667889999999999999999 99999999999999999999998543
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSS 524 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~ 524 (560)
|++| ++.++|||||||++|||++|+.||.....
T Consensus 175 ------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~ 207 (286)
T 3uqc_A 175 ------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGV 207 (286)
T ss_dssp ------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred ------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 3443 67899999999999999999999986543
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-33 Score=278.76 Aligned_cols=229 Identities=31% Similarity=0.490 Sum_probs=130.2
Q ss_pred CCCCEEEccCCcCcc--cCCCCCCCcCCCCEEEccC-CcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCE
Q 035761 5 RNLVHLDLSDNHFMG--HIPPTLGRLSELKILNLSL-NSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQV 81 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 81 (560)
.+++.|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|.++++|++|+|++|++++..|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 345566666666655 5555566666666666663 5555555666666666666666666665555555666666666
Q ss_pred EEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCC-CCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcc
Q 035761 82 LDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLT-QLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNL 160 (560)
Q Consensus 82 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 160 (560)
|+|++|.+++..|..+..+++|++|+|++|++++.+|..+..++ +|+.|++++|++++..|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 66666666655555566666666666666666555555555555 566666666665555555555554 5555555555
Q ss_pred cccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc---ccCCCCcCCCCCCCCcCC
Q 035761 161 LSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV---RKVPHLDVSGNQFGGEIP 235 (560)
Q Consensus 161 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~---~~l~~l~l~~n~~~~~~p 235 (560)
+++..|..|..+++|+.|+|++|++++.+|. +..+++|+.|++++|.+++.+|..+ .+++.|++++|++.+.+|
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 5555555555555555555555555543333 4455555555555555555555433 334445555555554433
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=9e-33 Score=272.47 Aligned_cols=230 Identities=27% Similarity=0.468 Sum_probs=216.2
Q ss_pred CCCCCCCCEEEccC-CcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCC
Q 035761 1 MGRLRNLVHLDLSD-NHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVL 79 (560)
Q Consensus 1 ~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 79 (560)
|+++++|++|+|++ |.+++.+|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|
T Consensus 72 l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 151 (313)
T 1ogq_A 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred HhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCC
Confidence 45789999999995 99999999999999999999999999999999999999999999999999998999999999999
Q ss_pred CEEEeecCccCccCCCCcCCCC-CccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccC
Q 035761 80 QVLDLSRNEIGGSIPSTLGHLK-WLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGN 158 (560)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 158 (560)
++|+|++|.+++..|..+..++ +|+.|+|++|++++..|..+..++ |+.|++++|.+++..|..+..+++|+.|++++
T Consensus 152 ~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (313)
T 1ogq_A 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCS
T ss_pred CeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCC
Confidence 9999999999988999999998 999999999999999999999987 99999999999999999999999999999999
Q ss_pred cccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc--ccccCCCCcCCCCCCCC
Q 035761 159 NLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV--FVRKVPHLDVSGNQFGG 232 (560)
Q Consensus 159 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~--~~~~l~~l~l~~n~~~~ 232 (560)
|.+++..|. +..+++|++|++++|++++.+|..+..+++|+.|++++|++++.+|. .+++++.+++.+|+.-|
T Consensus 231 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc 305 (313)
T 1ogq_A 231 NSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp SEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEE
T ss_pred CceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCcc
Confidence 999966665 88999999999999999999999999999999999999999998887 46788899999999433
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.98 E-value=2.1e-32 Score=302.53 Aligned_cols=234 Identities=37% Similarity=0.598 Sum_probs=155.8
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEE
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+.++++|++|
T Consensus 416 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 495 (768)
T 3rgz_A 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWI 495 (768)
T ss_dssp GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred cCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEE
Confidence 45556666666666665666666666666666666666666666666666666666666666666666666666666666
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCcc------------------
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPE------------------ 144 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------------------ 144 (560)
+|++|++++.+|..+..+++|+.|+|++|++++.+|..+.++++|+.|++++|.+++.+|..
T Consensus 496 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~ 575 (768)
T 3rgz_A 496 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 575 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEE
T ss_pred EccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccc
Confidence 66666666666666666666666666666666666666666666666666666666544432
Q ss_pred ----------------------------------------------------CcCCCCCcEEEccCcccccccchhhccc
Q 035761 145 ----------------------------------------------------LMNCSKLRILKLGNNLLSGSIPSQIGKL 172 (560)
Q Consensus 145 ----------------------------------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l 172 (560)
+..+++|+.|+|++|++++.+|..++.+
T Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l 655 (768)
T 3rgz_A 576 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSM 655 (768)
T ss_dssp EEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGC
T ss_pred cccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhcc
Confidence 2234566677777777777777777777
Q ss_pred cccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc---ccCCCCcCCCCCCCCcCCc
Q 035761 173 QELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV---RKVPHLDVSGNQFGGEIPT 236 (560)
Q Consensus 173 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~---~~l~~l~l~~n~~~~~~p~ 236 (560)
++|+.|+|++|++++.+|..++.+++|+.|||++|++++.+|..+ ..++.|++++|++.|.+|.
T Consensus 656 ~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 656 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCS
T ss_pred ccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCC
Confidence 777777777777777777777777777777777777777777654 3455667777777766554
No 254
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=4.3e-31 Score=257.20 Aligned_cols=231 Identities=19% Similarity=0.151 Sum_probs=142.4
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccc-cccccccccCCCCCCCEEE
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNR-MNGSILLGIGSLKVLQVLD 83 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~ 83 (560)
++|++|+|++|.++++.+..|..+++|++|+|++|.++++.|..|.++++|++|+|++|+ ++...+..|.++++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 456666666666666555666666666666666666666656666666666666666665 5555566666666666666
Q ss_pred eecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccc
Q 035761 84 LSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSG 163 (560)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 163 (560)
+++|++++..+..|.++++|++|++++|.+++..+..|.++++|+.|+|++|++++..+..|..+++|+.|++++|.+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 66666665556666666666666666666665555556666666666666666665555556666666666666666666
Q ss_pred ccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc--ccccCCCCcCCCCCCCCcCC
Q 035761 164 SIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV--FVRKVPHLDVSGNQFGGEIP 235 (560)
Q Consensus 164 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~--~~~~l~~l~l~~n~~~~~~p 235 (560)
..|..|..+++|+.|++++|++++..+..+..+++|+.|++++|++.+..+. .+..++.+....+.+.|..|
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 5566666666666666666666655555566666666666666666654443 11223333444455444433
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=2.6e-31 Score=293.83 Aligned_cols=231 Identities=38% Similarity=0.562 Sum_probs=216.1
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|+++++|++|+|++|.+++.+|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+.++++|+
T Consensus 438 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 517 (768)
T 3rgz_A 438 LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred HhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCC
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCcc----------------------------------------
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSS---------------------------------------- 120 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------------------------------------- 120 (560)
+|+|++|++++.+|..+.++++|+.|+|++|.+++.+|..
T Consensus 518 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (768)
T 3rgz_A 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 597 (768)
T ss_dssp EEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECT
T ss_pred EEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999998766643
Q ss_pred ------------------------------CCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhc
Q 035761 121 ------------------------------LGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIG 170 (560)
Q Consensus 121 ------------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 170 (560)
+..+++|+.|+|++|++++.+|..++.+++|+.|+|++|++++.+|..|+
T Consensus 598 ~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~ 677 (768)
T 3rgz_A 598 GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 677 (768)
T ss_dssp TCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred cccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHh
Confidence 34467899999999999999999999999999999999999999999999
Q ss_pred cccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc--ccccCCCCcCCCCCCC
Q 035761 171 KLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV--FVRKVPHLDVSGNQFG 231 (560)
Q Consensus 171 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~--~~~~l~~l~l~~n~~~ 231 (560)
.+++|+.|+|++|++++.+|..+..+++|+.|++++|+++|.+|. .+..+....+.||+.-
T Consensus 678 ~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~L 740 (768)
T 3rgz_A 678 DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGL 740 (768)
T ss_dssp GCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEE
T ss_pred CCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchh
Confidence 999999999999999999999999999999999999999999997 4677788888888743
No 256
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=6.5e-31 Score=273.68 Aligned_cols=235 Identities=21% Similarity=0.265 Sum_probs=146.3
Q ss_pred CCCCCCCCEEEccCCcCcc-cCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccc--cCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMG-HIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLG--IGSLK 77 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~--~~~l~ 77 (560)
|+++++|++|+|++|.+.+ +.+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+.. |.+++
T Consensus 50 ~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~ 129 (455)
T 3v47_A 50 FSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLT 129 (455)
T ss_dssp TSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCT
T ss_pred hccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcc
Confidence 4566777777777777753 34556777777777777777777666777777777777777777776543333 67777
Q ss_pred CCCEEEeecCccCccCCCC-cCCCCCccEEEccCCCccCCCCccCCCC--------------------------------
Q 035761 78 VLQVLDLSRNEIGGSIPST-LGHLKWLRSVDLSQNKLVGPIPSSLGHL-------------------------------- 124 (560)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------------------------------- 124 (560)
+|++|+|++|.+++..|.. +.++++|++|++++|.+++..+..+..+
T Consensus 130 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~ 209 (455)
T 3v47_A 130 SLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPF 209 (455)
T ss_dssp TCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTT
T ss_pred cCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcccccccccc
Confidence 7777777777777665554 6667777777777776665544333221
Q ss_pred -----------------------------------------------------------------CCCcEEECcCCcCcC
Q 035761 125 -----------------------------------------------------------------TQLTTLNMYNNKLDG 139 (560)
Q Consensus 125 -----------------------------------------------------------------~~L~~L~l~~n~l~~ 139 (560)
++|+.|++++|.+++
T Consensus 210 ~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 289 (455)
T 3v47_A 210 KNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA 289 (455)
T ss_dssp TTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCE
T ss_pred ccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccc
Confidence 234444444444444
Q ss_pred CCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc--
Q 035761 140 PIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV-- 217 (560)
Q Consensus 140 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~-- 217 (560)
..|..+..+++|+.|++++|.+++..|..|..+++|++|+|++|++++..|..+..+++|+.|++++|.+++..|..+
T Consensus 290 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 369 (455)
T 3v47_A 290 LLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLG 369 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred cchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccc
Confidence 455556666666666666666665555566666666666666666665555666666666666666666665555433
Q ss_pred -ccCCCCcCCCCCCCCcCC
Q 035761 218 -RKVPHLDVSGNQFGGEIP 235 (560)
Q Consensus 218 -~~l~~l~l~~n~~~~~~p 235 (560)
++++.|++++|++.+.++
T Consensus 370 l~~L~~L~L~~N~l~~~~~ 388 (455)
T 3v47_A 370 LPNLKELALDTNQLKSVPD 388 (455)
T ss_dssp CTTCCEEECCSSCCSCCCT
T ss_pred cccccEEECCCCccccCCH
Confidence 345555666666655433
No 257
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.5e-30 Score=270.37 Aligned_cols=227 Identities=21% Similarity=0.184 Sum_probs=210.5
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+++...+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 47999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred ecCccCccCCCCcCCCCCccEEEccC-CCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccc
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQ-NKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSG 163 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 163 (560)
++|+|+...+..|.++++|+.|+|++ |.+..+.+..|.++++|+.|+|++|.+++. | .+..+++|+.|+|++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 99999988888999999999999999 566656666899999999999999999965 3 68899999999999999999
Q ss_pred ccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcc---cccCCCCcCCCCCCCCc
Q 035761 164 SIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVF---VRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 164 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~---~~~l~~l~l~~n~~~~~ 233 (560)
..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+.. +.+++.|++.+|++.|.
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 99999999999999999999999999999999999999999999999777664 46778899999999876
No 258
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=2.7e-30 Score=267.51 Aligned_cols=227 Identities=23% Similarity=0.207 Sum_probs=209.8
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++++.|+|++|+|+++.+..|.++++|++|+|++|+|+.+.+..|.++++|++|+|++|+++...+..|.++++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 57999999999999998999999999999999999999888899999999999999999999888889999999999999
Q ss_pred ecCccCccCCCCcCCCCCccEEEccC-CCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccc
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQ-NKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSG 163 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 163 (560)
++|.|+...+..|.++++|+.|+|++ |.+..+.+..|.++++|+.|+|++|.++.. | .+..+++|+.|+|++|.+++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCc
Confidence 99999988888999999999999999 556656666899999999999999999954 4 58899999999999999999
Q ss_pred ccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc---ccCCCCcCCCCCCCCc
Q 035761 164 SIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV---RKVPHLDVSGNQFGGE 233 (560)
Q Consensus 164 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~---~~l~~l~l~~n~~~~~ 233 (560)
..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+ .+++.|++.+|++.|.
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 889999999999999999999999999999999999999999999998777644 6678899999999875
No 259
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=6.8e-30 Score=266.00 Aligned_cols=137 Identities=20% Similarity=0.222 Sum_probs=70.3
Q ss_pred CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcce-ecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLV-GNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
+|++|+|++|.++++.|..|.++++|++|+|++|.+. .+.+..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 31 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 110 (455)
T 3v47_A 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTL 110 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeC
Confidence 4555555555555555555555555555555555553 233444555555555555555555444555555555555555
Q ss_pred ecCccCccCCC--CcCCCCCccEEEccCCCccCCCCcc-CCCCCCCcEEECcCCcCcCCCC
Q 035761 85 SRNEIGGSIPS--TLGHLKWLRSVDLSQNKLVGPIPSS-LGHLTQLTTLNMYNNKLDGPIP 142 (560)
Q Consensus 85 ~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~ 142 (560)
++|++++..+. .|.++++|++|+|++|.+++..|.. +.++++|++|++++|.+++..+
T Consensus 111 ~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 171 (455)
T 3v47_A 111 TQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICE 171 (455)
T ss_dssp TTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCT
T ss_pred CCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccCh
Confidence 55555542222 2555555555555555555444433 4555555555555555554433
No 260
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.6e-30 Score=254.36 Aligned_cols=228 Identities=20% Similarity=0.220 Sum_probs=206.7
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceec--CCccccCCCCCCeeeccccccccccccccCCCCCCCEE
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGN--IPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~--~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
++|++|+|++|+++.+.+..|.++++|++|+|++|.++.. .+..+..+++|++|+|++|.++ ..+..+.++++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 5899999999999977667789999999999999999843 3677888999999999999998 456678999999999
Q ss_pred EeecCccCccCC-CCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcC-CCCccCcCCCCCcEEEccCcc
Q 035761 83 DLSRNEIGGSIP-STLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDG-PIPPELMNCSKLRILKLGNNL 160 (560)
Q Consensus 83 ~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~ 160 (560)
++++|++++..+ ..+..+++|++|++++|.+++..+..+.++++|++|++++|.+++ ..|..+..+++|+.|++++|.
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999997655 689999999999999999998889999999999999999999986 578899999999999999999
Q ss_pred cccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc----ccCCCCcCCCCCCCCc
Q 035761 161 LSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV----RKVPHLDVSGNQFGGE 233 (560)
Q Consensus 161 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~----~~l~~l~l~~n~~~~~ 233 (560)
+++..|..|..+++|++|++++|++++..+..+..+++|+.|++++|++++..|..+ .+++.|++++|++.|.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 998889999999999999999999998888889999999999999999999888654 3677899999999875
No 261
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.1e-32 Score=288.17 Aligned_cols=217 Identities=24% Similarity=0.251 Sum_probs=189.9
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEE
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34589999999999998888999999999999999999997765 9999999999999999986543 2899999
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCc-CCCCCcEEEccCccc
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELM-NCSKLRILKLGNNLL 161 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l 161 (560)
++++|.|++..+. .+++|+.|+|++|.+++..|..+.++++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999976654 357899999999999988888999999999999999999988888876 799999999999999
Q ss_pred ccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc--ccccCCCCcCCCCCCCC
Q 035761 162 SGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV--FVRKVPHLDVSGNQFGG 232 (560)
Q Consensus 162 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~--~~~~l~~l~l~~n~~~~ 232 (560)
++..+ +..+++|+.|+|++|.+++..| .+..+++|+.|++++|.+++.++. .++++..|++++|++.|
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCH
T ss_pred ccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcC
Confidence 96632 4469999999999999996555 588999999999999999964332 33678889999999874
No 262
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=3.9e-30 Score=255.15 Aligned_cols=224 Identities=22% Similarity=0.300 Sum_probs=204.8
Q ss_pred CCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEE
Q 035761 4 LRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLD 83 (560)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 83 (560)
.++++.|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..+.++++|++|+|++|+++ .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 478999999999999 67888999999999999999999 88999999999999999999999 6788899999999999
Q ss_pred eecCccCccCCCCcCC---------CCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEE
Q 035761 84 LSRNEIGGSIPSTLGH---------LKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRIL 154 (560)
Q Consensus 84 l~~n~l~~~~~~~~~~---------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 154 (560)
|++|++.+.+|..+.. +++|++|+|++|+++ .+|..+.++++|++|+|++|.+++ +|..+..+++|+.|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 9999888888887764 999999999999999 788899999999999999999995 66789999999999
Q ss_pred EccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccCC---CCcCCCCCCC
Q 035761 155 KLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVP---HLDVSGNQFG 231 (560)
Q Consensus 155 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~---~l~l~~n~~~ 231 (560)
++++|.+.+.+|..|..+++|++|+|++|++.+.+|..+..+++|+.|++++|++.+.+|..+.+++ .+++..|.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999776555 4556655544
Q ss_pred C
Q 035761 232 G 232 (560)
Q Consensus 232 ~ 232 (560)
.
T Consensus 315 ~ 315 (328)
T 4fcg_A 315 Q 315 (328)
T ss_dssp C
T ss_pred H
Confidence 3
No 263
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97 E-value=1.2e-31 Score=284.10 Aligned_cols=186 Identities=18% Similarity=0.096 Sum_probs=132.1
Q ss_pred eeccCCeeEEEEE-eCCCcEEEEEEccchh--------hhhhhHHHHHHHHHHHhcc-CCCCcceeeeEEEeCCEEEEEE
Q 035761 323 IGTGGYGSVYRAR-LPSGKVVALKKLHRLE--------TELASLESFQNEARLLSQI-RHRNIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 323 ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--------~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 392 (560)
.+.|+.|.+..++ .-.|+.++||.+.... ......++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4455555555543 2348889999986531 1223446799999999999 7999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD 472 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 472 (560)
||++|++|.+++...+. ++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+....+
T Consensus 322 Eyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999986543 6654 5899999999999999 9999999999999999999999999999987655
Q ss_pred CCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCC
Q 035761 473 SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHP 518 (560)
Q Consensus 473 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P 518 (560)
.......+||+.|||||++.+. +..++|+||+|++++++.+|..|
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 5555567899999999998764 56789999999998877665544
No 264
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.5e-29 Score=244.72 Aligned_cols=224 Identities=21% Similarity=0.183 Sum_probs=205.2
Q ss_pred CCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeec
Q 035761 7 LVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSR 86 (560)
Q Consensus 7 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 86 (560)
-++++.+++.++ .+|..+ .++|++|+|++|.++++.+..|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 368999999998 456544 47999999999999988888999999999999999999988899999999999999999
Q ss_pred Cc-cCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccccc
Q 035761 87 NE-IGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSI 165 (560)
Q Consensus 87 n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 165 (560)
|. ++...+..|..+++|++|++++|.+++..+..|.++++|++|++++|.+++..+..|..+++|+.|++++|.+++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 97 88777889999999999999999999888899999999999999999999877778999999999999999999777
Q ss_pred chhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcc---cccCCCCcCCCCCCCCc
Q 035761 166 PSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVF---VRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 166 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~---~~~l~~l~l~~n~~~~~ 233 (560)
+..|..+++|++|++++|++++..|..+..+++|+.|++++|.+++..+.. +.+++.|++++|++.|.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 778999999999999999999888999999999999999999999877654 46778899999999875
No 265
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=265.60 Aligned_cols=235 Identities=22% Similarity=0.196 Sum_probs=126.6
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCE
Q 035761 2 GRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQV 81 (560)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 81 (560)
.++++|++|+|++|.++++.|..|.++++|++|+|++|+++.+.+..|.++++|++|+|++|+++...+..|.++++|++
T Consensus 53 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 132 (477)
T 2id5_A 53 ASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKS 132 (477)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCE
Confidence 34455555555555555555555555555555555555555444444555555555555555555444555555555555
Q ss_pred EEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCC----------
Q 035761 82 LDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKL---------- 151 (560)
Q Consensus 82 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L---------- 151 (560)
|+|++|.+++..+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|.+.+..+..|..+++|
T Consensus 133 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~ 212 (477)
T 2id5_A 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212 (477)
T ss_dssp EEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT
T ss_pred EECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc
Confidence 5555555555445555555555555555555554433444445555555555554444333344443333
Q ss_pred --------------cEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc
Q 035761 152 --------------RILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV 217 (560)
Q Consensus 152 --------------~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~ 217 (560)
+.|++++|.++...+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|.+++..|..+
T Consensus 213 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 292 (477)
T 2id5_A 213 LDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAF 292 (477)
T ss_dssp CCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTB
T ss_pred ccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHh
Confidence 333333344443333455666666666666666666556666666666666666666666555433
Q ss_pred ---ccCCCCcCCCCCCCCcCCc
Q 035761 218 ---RKVPHLDVSGNQFGGEIPT 236 (560)
Q Consensus 218 ---~~l~~l~l~~n~~~~~~p~ 236 (560)
.+++.|++++|++.+..+.
T Consensus 293 ~~l~~L~~L~L~~N~l~~~~~~ 314 (477)
T 2id5_A 293 RGLNYLRVLNVSGNQLTTLEES 314 (477)
T ss_dssp TTCTTCCEEECCSSCCSCCCGG
T ss_pred cCcccCCEEECCCCcCceeCHh
Confidence 4455666666666654433
No 266
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=4.5e-30 Score=252.72 Aligned_cols=239 Identities=22% Similarity=0.250 Sum_probs=212.3
Q ss_pred CCCCCCCCEEEccCCcCccc--CCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccc-cccCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGH--IPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSIL-LGIGSLK 77 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~ 77 (560)
|+++++|++|+|++|.++.. .+..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..+..++
T Consensus 48 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 126 (306)
T 2z66_A 48 FDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 126 (306)
T ss_dssp TTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCT
T ss_pred hhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhcc
Confidence 46889999999999999843 3566778999999999999999 567779999999999999999997655 6899999
Q ss_pred CCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccC-CCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEc
Q 035761 78 VLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVG-PIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKL 156 (560)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 156 (560)
+|++|++++|.+++..+..+..+++|++|+|++|.+++ ..|..+..+++|++|+|++|.+++..|..+..+++|+.|++
T Consensus 127 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 206 (306)
T 2z66_A 127 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206 (306)
T ss_dssp TCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEEC
Confidence 99999999999998888999999999999999999986 57889999999999999999999888999999999999999
Q ss_pred cCcccccccchhhccccccceeeccccccCCcCccccCCCc-eeeEEEccCCccccccC-----cccccCCCCcCCCCCC
Q 035761 157 GNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFS-CIDTVDLSMNNLSGGIP-----VFVRKVPHLDVSGNQF 230 (560)
Q Consensus 157 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-~L~~l~l~~n~l~~~~~-----~~~~~l~~l~l~~n~~ 230 (560)
++|.+++..+..+..+++|++|++++|++++..|..+..++ +|+.|++++|++++..+ .+++..+.+.+..+.+
T Consensus 207 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~ 286 (306)
T 2z66_A 207 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERM 286 (306)
T ss_dssp TTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGC
T ss_pred CCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhcccccc
Confidence 99999988888899999999999999999999999999985 99999999999997654 3556667777777777
Q ss_pred CCcCCcccCC
Q 035761 231 GGEIPTTLAN 240 (560)
Q Consensus 231 ~~~~p~~~~~ 240 (560)
.|..|....+
T Consensus 287 ~C~~p~~~~g 296 (306)
T 2z66_A 287 ECATPSDKQG 296 (306)
T ss_dssp BEEESGGGTT
T ss_pred ccCCchhhCC
Confidence 7765555433
No 267
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=1e-29 Score=266.26 Aligned_cols=233 Identities=21% Similarity=0.184 Sum_probs=198.9
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|+++++|++|+|++|.++++.+..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|+++...+..|.++++|+
T Consensus 76 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 155 (477)
T 2id5_A 76 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155 (477)
T ss_dssp TTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCC
T ss_pred hhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCC
Confidence 56788999999999999977777889999999999999999988888899999999999999999888888888899999
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcE------------------------EECcCCc
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTT------------------------LNMYNNK 136 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~------------------------L~l~~n~ 136 (560)
+|+|++|++++..+..|.++++|+.|+|++|.+++..+..|..+++|+. |+|++|.
T Consensus 156 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 156 QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCN 235 (477)
T ss_dssp EEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSC
T ss_pred EEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCc
Confidence 9999999888766667788888888888888887666666666655554 5555566
Q ss_pred CcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcc
Q 035761 137 LDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVF 216 (560)
Q Consensus 137 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~ 216 (560)
+++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.+++..+..
T Consensus 236 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 315 (477)
T 2id5_A 236 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESV 315 (477)
T ss_dssp CCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGG
T ss_pred ccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhH
Confidence 66444457889999999999999999888888999999999999999999999999999999999999999999877765
Q ss_pred c---ccCCCCcCCCCCCCCc
Q 035761 217 V---RKVPHLDVSGNQFGGE 233 (560)
Q Consensus 217 ~---~~l~~l~l~~n~~~~~ 233 (560)
+ .+++.|++.+|++.|.
T Consensus 316 ~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 316 FHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp BSCGGGCCEEECCSSCEECS
T ss_pred cCCCcccCEEEccCCCccCc
Confidence 4 6788999999999875
No 268
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=7.3e-30 Score=260.15 Aligned_cols=228 Identities=21% Similarity=0.167 Sum_probs=180.1
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEE
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
++++|++|+|++|.++++.+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|.++++|++|
T Consensus 67 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 67 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 146 (390)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEE
Confidence 46788888888888887777788888888888888888887777778888888888888888886666667788888888
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCC-------------------------------------C
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHL-------------------------------------T 125 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------------------------------------~ 125 (560)
++++|.+++..+..|.++++|++|++++|.+++.....+..+ +
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 226 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNV 226 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCS
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccc
Confidence 888888887777778888888888888888775432222222 2
Q ss_pred CCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEcc
Q 035761 126 QLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLS 205 (560)
Q Consensus 126 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~ 205 (560)
+|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+++
T Consensus 227 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~ 303 (390)
T 3o6n_A 227 ELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLS 303 (390)
T ss_dssp SCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECC
T ss_pred cccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECC
Confidence 455556666666543 567888999999999999998889999999999999999999985 56677889999999999
Q ss_pred CCccccccCc--ccccCCCCcCCCCCCCCc
Q 035761 206 MNNLSGGIPV--FVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 206 ~n~l~~~~~~--~~~~l~~l~l~~n~~~~~ 233 (560)
+|++++.++. .+++++.|++++|++...
T Consensus 304 ~n~l~~~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 304 HNHLLHVERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp SSCCCCCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CCcceecCccccccCcCCEEECCCCcccee
Confidence 9999865443 457889999999998765
No 269
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.1e-28 Score=245.42 Aligned_cols=224 Identities=21% Similarity=0.225 Sum_probs=145.7
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|+|++|+++++.+..|.++++|++|+|++|.++++.|..|.++++|++|+|++|+++.. |..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l-~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL-PEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBC-CSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCcc-Chhhc--ccccEEEC
Confidence 4678888888888877777788888888888888888877778888888888888888887733 33332 56777777
Q ss_pred ecCccCccCCCCcCCCCCccEEEccCCCccC--CCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQNKLVG--PIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
++|.+++..+..|.++++|+.|++++|.++. ..+..+.++++|+.|++++|.++. +|..+. ++|+.|++++|.++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCC
Confidence 7777776555566666777777777776642 455566666666666666666663 333332 56666666666666
Q ss_pred cccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcc---cccCCCCcCCCCCCCCcCC
Q 035761 163 GSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVF---VRKVPHLDVSGNQFGGEIP 235 (560)
Q Consensus 163 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~---~~~l~~l~l~~n~~~~~~p 235 (560)
+..|..|..+++|++|++++|++++..+..+..+++|+.|++++|+++ .+|.. +++++.|++++|++.+..+
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccCh
Confidence 555566666666666666666666555555666666666666666666 33332 2445556666666655433
No 270
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=6e-30 Score=257.10 Aligned_cols=229 Identities=18% Similarity=0.132 Sum_probs=199.4
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|+|++|+++++.+..|.++++|++|+|++|+++++.|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 47999999999999888879999999999999999999888999999999999999999999777777999999999999
Q ss_pred ecCccCccCC-CCcCCCCCccEEEccCC-CccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 85 SRNEIGGSIP-STLGHLKWLRSVDLSQN-KLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 85 ~~n~l~~~~~-~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
++|++++..+ ..+.++++|++|++++| .++...+..|.++++|++|++++|.+++..|..+..+++|+.|++++|.++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9999996544 47899999999999999 577777889999999999999999999888999999999999999999998
Q ss_pred cccchhhccccccceeeccccccCCcC-------------------------------ccccCCCceeeEEEccCCcccc
Q 035761 163 GSIPSQIGKLQELYYLDLSGNFINGKI-------------------------------PSQLGEFSCIDTVDLSMNNLSG 211 (560)
Q Consensus 163 ~~~~~~~~~l~~L~~L~l~~n~l~~~~-------------------------------~~~~~~~~~L~~l~l~~n~l~~ 211 (560)
...+..+..+++|+.|++++|.+++.. |..+..+++|+.|++++|+++.
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS 291 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc
Confidence 555455567899999999999998743 3345677889999999999985
Q ss_pred ccCcc---cccCCCCcCCCCCCCCc
Q 035761 212 GIPVF---VRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 212 ~~~~~---~~~l~~l~l~~n~~~~~ 233 (560)
..+.. +++++.|++++|++.|.
T Consensus 292 i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 292 VPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCHHHHhcCCCCCEEEeeCCCccCc
Confidence 44432 45677889999998875
No 271
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.3e-29 Score=272.33 Aligned_cols=228 Identities=21% Similarity=0.167 Sum_probs=182.5
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEE
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
++++|++|+|++|.|+++.|..|..+++|++|+|++|.|++..|..|.++++|++|+|++|.++...+..|.++++|++|
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 46788889999888888888888888899999999998888888888888899999999998887777777888889999
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCC-------------------------------------C
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHL-------------------------------------T 125 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------------------------------------~ 125 (560)
+|++|.+++..|..|.++++|+.|+|++|.+++.....+.++ +
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~ 232 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNV 232 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCS
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCC
Confidence 999998888888888888888888888888875533333222 2
Q ss_pred CCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEcc
Q 035761 126 QLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLS 205 (560)
Q Consensus 126 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~ 205 (560)
+|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|+
T Consensus 233 ~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls 309 (597)
T 3oja_B 233 ELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLS 309 (597)
T ss_dssp CCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECC
T ss_pred CCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECC
Confidence 35555555555553 3567888899999999999998888889999999999999999985 56677788899999999
Q ss_pred CCccccccCc--ccccCCCCcCCCCCCCCc
Q 035761 206 MNNLSGGIPV--FVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 206 ~n~l~~~~~~--~~~~l~~l~l~~n~~~~~ 233 (560)
+|++++.++. .++++..|++++|++.+.
T Consensus 310 ~N~l~~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 310 HNHLLHVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp SSCCCCCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CCCCCccCcccccCCCCCEEECCCCCCCCc
Confidence 9998854332 346788888888888765
No 272
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=255.30 Aligned_cols=213 Identities=21% Similarity=0.221 Sum_probs=197.8
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|+++++|++|+|++|.|+++.+..|.++++|++|+|++|+|+.+.+..|..+++|++|+|++|+++...+..|.++++|+
T Consensus 84 ~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 163 (440)
T 3zyj_A 84 FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 163 (440)
T ss_dssp TSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCC
T ss_pred hhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccC
Confidence 56889999999999999988889999999999999999999988788899999999999999999988888999999999
Q ss_pred EEEeec-CccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCc
Q 035761 81 VLDLSR-NEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 81 ~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 159 (560)
+|+|++ |.++...+..|.++++|+.|+|++|+++ .+| .+..+++|+.|+|++|.+++..|..|..+++|+.|++++|
T Consensus 164 ~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 241 (440)
T 3zyj_A 164 RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS 241 (440)
T ss_dssp EEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred EeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCC
Confidence 999999 5666566668999999999999999999 455 4889999999999999999988999999999999999999
Q ss_pred ccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV 215 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~ 215 (560)
++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++.+....
T Consensus 242 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 242 QIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred ceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 99999999999999999999999999988888899999999999999999876543
No 273
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.5e-28 Score=255.38 Aligned_cols=213 Identities=20% Similarity=0.168 Sum_probs=198.2
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|+++++|++|+|++|.|+++.+..|.++++|++|+|++|+|+.+.+..|.++++|++|+|++|+++.+.+..|.++++|+
T Consensus 95 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 174 (452)
T 3zyi_A 95 FRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLM 174 (452)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCC
T ss_pred cCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCccc
Confidence 56899999999999999999999999999999999999999988888899999999999999999988888999999999
Q ss_pred EEEeec-CccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCc
Q 035761 81 VLDLSR-NEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 81 ~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 159 (560)
+|+|++ |.++...+..|.++++|+.|+|++|++++. | .+..+++|+.|+|++|.+++..|..|..+++|+.|++++|
T Consensus 175 ~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 252 (452)
T 3zyi_A 175 RLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNS 252 (452)
T ss_dssp EEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTS
T ss_pred EEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCC
Confidence 999999 567766666899999999999999999954 4 5889999999999999999988999999999999999999
Q ss_pred ccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV 215 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~ 215 (560)
++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++.+....
T Consensus 253 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 253 QVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred cCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 99999999999999999999999999988888899999999999999999876653
No 274
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=2.6e-28 Score=242.73 Aligned_cols=225 Identities=23% Similarity=0.259 Sum_probs=159.9
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|+++++|++|+|++|.++++.|..|..+++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|+
T Consensus 72 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 148 (330)
T 1xku_A 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMI 148 (330)
T ss_dssp TTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCC
T ss_pred hccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCcccc
Confidence 356677777777777777766777777777777777777777 4444443 6777777777777766666777777777
Q ss_pred EEEeecCccCc--cCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccC
Q 035761 81 VLDLSRNEIGG--SIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGN 158 (560)
Q Consensus 81 ~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 158 (560)
+|++++|.++. ..+..+.++++|+.|++++|.++. +|..+. ++|++|++++|.+++..+..+..+++|+.|++++
T Consensus 149 ~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 225 (330)
T 1xku_A 149 VVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 225 (330)
T ss_dssp EEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCS
T ss_pred EEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 77777777753 556677777777777777777773 444443 6777777777777766677777777777777777
Q ss_pred cccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc---------ccCCCCcCCCCC
Q 035761 159 NLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV---------RKVPHLDVSGNQ 229 (560)
Q Consensus 159 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~---------~~l~~l~l~~n~ 229 (560)
|.+++..+..|..+++|++|++++|+++ .+|..+..+++|+.|++++|++++..+..+ ..+..+++.+|+
T Consensus 226 n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~ 304 (330)
T 1xku_A 226 NSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNP 304 (330)
T ss_dssp SCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred CcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCc
Confidence 7777666667777777777777777777 566667777777777777777776555433 344566777777
Q ss_pred CCC
Q 035761 230 FGG 232 (560)
Q Consensus 230 ~~~ 232 (560)
+..
T Consensus 305 ~~~ 307 (330)
T 1xku_A 305 VQY 307 (330)
T ss_dssp SCG
T ss_pred ccc
Confidence 653
No 275
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=2.9e-28 Score=242.58 Aligned_cols=224 Identities=22% Similarity=0.244 Sum_probs=157.2
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|+|++|.++++.+..|.++++|++|+|++|+++++.|..|.++++|++|+|++|+++.. |..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l-~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI-PPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSC-CSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCcc-Ccccc--ccCCEEEC
Confidence 4688888888888877777888888888888888888877788888888888888888888743 33333 78888888
Q ss_pred ecCccCccCCCCcCCCCCccEEEccCCCcc--CCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQNKLV--GPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
++|+++...+..|.++++|+.|++++|.++ +..+..+..+ +|+.|++++|.+++ +|..+. ++|+.|++++|.++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~ 206 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQ 206 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCC
Confidence 888888666667888888888888888885 3566666666 66666666666663 333332 56666666666666
Q ss_pred cccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcc---cccCCCCcCCCCCCCCcCCc
Q 035761 163 GSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVF---VRKVPHLDVSGNQFGGEIPT 236 (560)
Q Consensus 163 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~---~~~l~~l~l~~n~~~~~~p~ 236 (560)
+..+..|..+++|++|++++|++++..+..+..+++|+.|++++|+++ .+|.. +++++.|++++|++.+..+.
T Consensus 207 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~ 282 (332)
T 2ft3_A 207 AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVN 282 (332)
T ss_dssp CCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTT
T ss_pred ccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChh
Confidence 655566666666666666666666655556666666666666666666 33332 24555666666666655443
No 276
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.96 E-value=7.4e-28 Score=232.21 Aligned_cols=206 Identities=23% Similarity=0.232 Sum_probs=184.1
Q ss_pred CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEee
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLS 85 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 85 (560)
+++++++++++++ .+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|+++.+.+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5789999999998 4666554 689999999999998877889999999999999999997777888999999999999
Q ss_pred cCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccccc
Q 035761 86 RNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSI 165 (560)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 165 (560)
+|.+++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|+.|++++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 99999877788899999999999999999888888999999999999999999777777899999999999999999877
Q ss_pred chhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccC
Q 035761 166 PSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIP 214 (560)
Q Consensus 166 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~ 214 (560)
+..|..+++|++|+|++|++++..+..+..+++|+.|++++|++.+...
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 7789999999999999999997777788889999999999999887654
No 277
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.96 E-value=1.5e-28 Score=237.98 Aligned_cols=222 Identities=21% Similarity=0.205 Sum_probs=174.8
Q ss_pred CEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecC
Q 035761 8 VHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRN 87 (560)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 87 (560)
.+++.++.+++ .+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|+++...+..|.++++|++|+|++|
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ceEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 35667777776 4565554 57888888888888777778888888888888888888777778888888888888888
Q ss_pred ccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCC-CCccCcCCCCCcEEEccCcccccccc
Q 035761 88 EIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGP-IPPELMNCSKLRILKLGNNLLSGSIP 166 (560)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~ 166 (560)
.+++..+..|.++++|++|++++|.+++..+..+.++++|++|++++|.+++. +|..+..+++|+.|++++|++++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 88877777888888888888888888877666788888888888888888764 47788888888888888888887777
Q ss_pred hhhccccccc----eeeccccccCCcCccccCCCceeeEEEccCCccccccCcc---cccCCCCcCCCCCCCCc
Q 035761 167 SQIGKLQELY----YLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVF---VRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 167 ~~~~~l~~L~----~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~---~~~l~~l~l~~n~~~~~ 233 (560)
..|..+++|+ .|++++|++++..+..+. ..+|+.|++++|.+++..+.. +.+++.|++++|++.|.
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 7777777777 788888888865555544 347888888888888766654 35667788888888775
No 278
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=2.3e-28 Score=263.90 Aligned_cols=236 Identities=22% Similarity=0.199 Sum_probs=168.9
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCC-ccccCCCCCCeeecccccccccc--ccccCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIP-SNVGHLTQLTTLAIASNRMNGSI--LLGIGSLK 77 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n~i~~~~--~~~~~~l~ 77 (560)
+.++++|++|++++|.+++..|..+..+++|++|++++|.+.+..| ..+..+++|++|++++|++++.. +..+.+++
T Consensus 297 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~ 376 (606)
T 3t6q_A 297 LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLS 376 (606)
T ss_dssp CCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCT
T ss_pred hcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCC
Confidence 3567788888888888887777777778888888888887764443 34777777888888887777655 66677777
Q ss_pred CCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCc-cCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEc
Q 035761 78 VLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPS-SLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKL 156 (560)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 156 (560)
+|++|++++|++++..+..|..+++|+.|++++|.+++..+. .+.++++|+.|++++|.+++..|..+..+++|+.|++
T Consensus 377 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 456 (606)
T 3t6q_A 377 HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNL 456 (606)
T ss_dssp TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEEC
Confidence 777777777777777777777777777777777777755443 3777777777777777777766777777777777777
Q ss_pred cCcccccc---cchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccCC--CCcCCCCCCC
Q 035761 157 GNNLLSGS---IPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVP--HLDVSGNQFG 231 (560)
Q Consensus 157 ~~n~l~~~---~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~--~l~l~~n~~~ 231 (560)
++|.+++. .+..+..+++|++|++++|++++..|..|..+++|+.|++++|++++..|..+.+++ .|++++|++.
T Consensus 457 ~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~L~L~~N~l~ 536 (606)
T 3t6q_A 457 QGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNHIS 536 (606)
T ss_dssp TTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSCEEECCSSCCC
T ss_pred CCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcccccEEECcCCccc
Confidence 77777652 224567777777777777777766677777777777777777777776666554333 4566777776
Q ss_pred CcCCc
Q 035761 232 GEIPT 236 (560)
Q Consensus 232 ~~~p~ 236 (560)
+.+|.
T Consensus 537 ~~~~~ 541 (606)
T 3t6q_A 537 IILPS 541 (606)
T ss_dssp CCCGG
T ss_pred ccCHh
Confidence 65443
No 279
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1e-28 Score=244.93 Aligned_cols=205 Identities=24% Similarity=0.346 Sum_probs=192.4
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCC------
Q 035761 2 GRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGS------ 75 (560)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~------ 75 (560)
.++++|++|+|++|.++ .+|..|..+++|++|+|++|.++ .+|..|.++++|++|+|++|++.+..|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 45789999999999999 88999999999999999999999 78999999999999999999888788877654
Q ss_pred ---CCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCc
Q 035761 76 ---LKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLR 152 (560)
Q Consensus 76 ---l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 152 (560)
+++|++|+|++|+++ .+|..+.++++|++|+|++|.+++ +|..+..+++|++|+|++|.+.+.+|..+..+++|+
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 999999999999999 788889999999999999999994 666899999999999999999999999999999999
Q ss_pred EEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccc
Q 035761 153 ILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLS 210 (560)
Q Consensus 153 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~ 210 (560)
.|++++|.+.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988765
No 280
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=2.9e-28 Score=248.26 Aligned_cols=229 Identities=18% Similarity=0.140 Sum_probs=199.4
Q ss_pred CCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEE
Q 035761 4 LRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLD 83 (560)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 83 (560)
++++++|++++|.++.+.+..|..+++|++|+|++|.++++.+..|..+++|++|+|++|++++..+..|.++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 57899999999999977666789999999999999999988888999999999999999999988899999999999999
Q ss_pred eecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCC---------------
Q 035761 84 LSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNC--------------- 148 (560)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--------------- 148 (560)
|++|+++...+..|.++++|++|++++|.+++..+..|.++++|+.|++++|.+++.....+..+
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~ 203 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAI 203 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEEC
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCC
Confidence 99999996666668999999999999999998888899999999999999999986533333222
Q ss_pred ----------------------CCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccC
Q 035761 149 ----------------------SKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSM 206 (560)
Q Consensus 149 ----------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~ 206 (560)
++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..+..+++|+.|++++
T Consensus 204 ~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (390)
T 3o6n_A 204 PIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 281 (390)
T ss_dssp CSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCS
T ss_pred CCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCC
Confidence 2466666677776643 5688999999999999999988899999999999999999
Q ss_pred CccccccCc--ccccCCCCcCCCCCCCCcC
Q 035761 207 NNLSGGIPV--FVRKVPHLDVSGNQFGGEI 234 (560)
Q Consensus 207 n~l~~~~~~--~~~~l~~l~l~~n~~~~~~ 234 (560)
|++++.... .+++++.|++++|++.+.+
T Consensus 282 n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~ 311 (390)
T 3o6n_A 282 NRLVALNLYGQPIPTLKVLDLSHNHLLHVE 311 (390)
T ss_dssp SCCCEEECSSSCCTTCCEEECCSSCCCCCG
T ss_pred CcCcccCcccCCCCCCCEEECCCCcceecC
Confidence 999975443 4578999999999998653
No 281
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=3.9e-28 Score=271.21 Aligned_cols=228 Identities=25% Similarity=0.278 Sum_probs=162.2
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|+|++|.+++..+..|..+++|++|+|++|+++++.|..|.++++|+.|+|++|++++..+..|.++++|++|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 56777777777777666777777777777777777777666777777777777777777777666677777777777777
Q ss_pred ecCccCccCCCCcCCCCCccEEEccCCCccCCC------------------Cc----------------------cCCCC
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPI------------------PS----------------------SLGHL 124 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------------------~~----------------------~~~~l 124 (560)
++|.++...+..|.++++|+.|+|++|.+++.. |. .+.++
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l 425 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRV 425 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTC
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcC
Confidence 777777666666666777777777766665321 00 02245
Q ss_pred CCCcEEECcCCcCcCC------------------------------CCccCcCCCCCcEEEccCcccccccchhhccccc
Q 035761 125 TQLTTLNMYNNKLDGP------------------------------IPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQE 174 (560)
Q Consensus 125 ~~L~~L~l~~n~l~~~------------------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 174 (560)
++|+.|+|++|++++. .+..|..+++|+.|+|++|.+++..|..|..+++
T Consensus 426 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCS
T ss_pred CccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhh
Confidence 5666666666655532 2234666777888888888888777777888888
Q ss_pred cceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccCCCCcCCCCCCCCcC
Q 035761 175 LYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVPHLDVSGNQFGGEI 234 (560)
Q Consensus 175 L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~l~~n~~~~~~ 234 (560)
|+.|+|++|++++..+..+. ++|+.|++++|++++..|..+.++..+++.+|++.|.+
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSS
T ss_pred hheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccc
Confidence 88888888888876666655 77888888888888888888888999999999998843
No 282
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=7e-28 Score=260.08 Aligned_cols=241 Identities=26% Similarity=0.289 Sum_probs=210.2
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeecccccccccc-ccccCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSI-LLGIGSLKVL 79 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L 79 (560)
|+++++|++|++++|.++ .+|..+..+++|++|++++|.+++..|..+.++++|+.|++++|.+.+.. +..+.++++|
T Consensus 274 ~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp TTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred hccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcC
Confidence 467889999999999998 67888999999999999999999888889999999999999999988544 4558999999
Q ss_pred CEEEeecCccCccC--CCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCc-cCcCCCCCcEEEc
Q 035761 80 QVLDLSRNEIGGSI--PSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPP-ELMNCSKLRILKL 156 (560)
Q Consensus 80 ~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l 156 (560)
++|++++|.+++.. +..+..+++|++|++++|.+++..|..|..+++|+.|++++|.+++..+. .+..+++|+.|++
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 99999999999765 77899999999999999999988889999999999999999999877655 4889999999999
Q ss_pred cCcccccccchhhccccccceeeccccccCCc---CccccCCCceeeEEEccCCccccccCccc---ccCCCCcCCCCCC
Q 035761 157 GNNLLSGSIPSQIGKLQELYYLDLSGNFINGK---IPSQLGEFSCIDTVDLSMNNLSGGIPVFV---RKVPHLDVSGNQF 230 (560)
Q Consensus 157 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~~~~~~~L~~l~l~~n~l~~~~~~~~---~~l~~l~l~~n~~ 230 (560)
++|.+++..|..+..+++|++|++++|++++. .+..+..+++|+.|++++|.+++..|..+ ++++.|++++|++
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCcc
Confidence 99999988889999999999999999999863 33568889999999999999998877654 5677889999999
Q ss_pred CCcCCcccCCCC
Q 035761 231 GGEIPTTLANVP 242 (560)
Q Consensus 231 ~~~~p~~~~~~~ 242 (560)
.+..+......+
T Consensus 513 ~~~~~~~l~~l~ 524 (606)
T 3t6q_A 513 TSSSIEALSHLK 524 (606)
T ss_dssp CGGGGGGGTTCC
T ss_pred CcCChhHhCccc
Confidence 987766655443
No 283
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.8e-27 Score=230.36 Aligned_cols=209 Identities=22% Similarity=0.233 Sum_probs=191.2
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|+|++|+++++.+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 36999999999999888889999999999999999999888889999999999999999999888899999999999999
Q ss_pred ecCccCccCCCCcCCCCCccEEEccCCCccCC-CCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCc----EEEccCc
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGP-IPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLR----ILKLGNN 159 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~----~L~l~~n 159 (560)
++|.+++..+..+..+++|++|++++|.+++. +|..+.++++|+.|+|++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999987777899999999999999999864 589999999999999999999988777887777777 8999999
Q ss_pred ccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccC
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIP 214 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~ 214 (560)
.+++..+..+. ..+|+.|++++|++++..+..+..+++|+.|++++|++++..+
T Consensus 188 ~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 188 PMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 99966665554 4589999999999998777788999999999999999998876
No 284
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=1.4e-27 Score=232.29 Aligned_cols=205 Identities=26% Similarity=0.267 Sum_probs=184.0
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCE
Q 035761 2 GRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQV 81 (560)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 81 (560)
++++++++|++++|+++ .+|..+. +++++|+|++|.|++..+..|.++++|+.|+|++|+|+...+. ..+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCE
Confidence 57889999999999999 4555554 7899999999999988899999999999999999999865443 78999999
Q ss_pred EEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccc
Q 035761 82 LDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLL 161 (560)
Q Consensus 82 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 161 (560)
|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 999999999 6788899999999999999999988888999999999999999999988788889999999999999999
Q ss_pred ccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCcccccc
Q 035761 162 SGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGI 213 (560)
Q Consensus 162 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~ 213 (560)
+...+..|..+++|+.|+|++|+++ .+|..+..+.+|+.+++++|++.+..
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 9777777899999999999999999 67777778889999999999998654
No 285
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=1.3e-27 Score=261.45 Aligned_cols=231 Identities=23% Similarity=0.230 Sum_probs=197.6
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCC-ccccCCCCCCeeeccccccccccccccCCCCCCCEEE
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIP-SNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLD 83 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 83 (560)
++|+.|++++|+++++.|..|..+++|++|+|++|.+.+.+| ..|.++++|++|+|++|++....+..|..+++|++|+
T Consensus 381 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ 460 (680)
T 1ziw_A 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLM 460 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEE
T ss_pred CcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccch
Confidence 367777777788887788888889999999999998886555 6788889999999999998888888888899999999
Q ss_pred eecCccC--ccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCC--------ccCcCCCCCcE
Q 035761 84 LSRNEIG--GSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIP--------PELMNCSKLRI 153 (560)
Q Consensus 84 l~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--------~~~~~l~~L~~ 153 (560)
+++|.++ +..|..|.++++|+.|+|++|+++++.+..|.++++|++|+|++|++++..+ ..|..+++|+.
T Consensus 461 l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~ 540 (680)
T 1ziw_A 461 LRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHI 540 (680)
T ss_dssp CTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCE
T ss_pred hccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCE
Confidence 9999886 4678889999999999999999998888889999999999999999985422 23788999999
Q ss_pred EEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc----ccccCCCCcCCCCC
Q 035761 154 LKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV----FVRKVPHLDVSGNQ 229 (560)
Q Consensus 154 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~----~~~~l~~l~l~~n~ 229 (560)
|++++|+++.+.+..|.++++|+.|+|++|++++..+..|..+++|+.|++++|++++..+. .+++++.+++.+|+
T Consensus 541 L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~ 620 (680)
T 1ziw_A 541 LNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 620 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCC
T ss_pred EECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCC
Confidence 99999999966666799999999999999999987778889999999999999999987776 35788899999999
Q ss_pred CCCcCC
Q 035761 230 FGGEIP 235 (560)
Q Consensus 230 ~~~~~p 235 (560)
+.|.++
T Consensus 621 ~~c~c~ 626 (680)
T 1ziw_A 621 FDCTCE 626 (680)
T ss_dssp CCBCCC
T ss_pred cccCCc
Confidence 988643
No 286
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=1.6e-27 Score=237.21 Aligned_cols=223 Identities=25% Similarity=0.312 Sum_probs=200.0
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|+++++|++|+|++|.++++.|..|.++++|++|+|++|+++ .+|..+. ++|++|++++|+++...+..|.++++|+
T Consensus 74 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 150 (332)
T 2ft3_A 74 FKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMN 150 (332)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCC
T ss_pred hhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCC
Confidence 568899999999999999888999999999999999999999 5555554 8999999999999988888899999999
Q ss_pred EEEeecCccCc--cCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccC
Q 035761 81 VLDLSRNEIGG--SIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGN 158 (560)
Q Consensus 81 ~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 158 (560)
+|++++|.++. ..+..+..+ +|+.|++++|++++ +|..+. ++|++|++++|.+++..+..+..+++|+.|++++
T Consensus 151 ~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~ 226 (332)
T 2ft3_A 151 CIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGH 226 (332)
T ss_dssp EEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCS
T ss_pred EEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 99999999963 678888888 99999999999995 555554 7999999999999988888999999999999999
Q ss_pred cccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc---------ccCCCCcCCCCC
Q 035761 159 NLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV---------RKVPHLDVSGNQ 229 (560)
Q Consensus 159 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~---------~~l~~l~l~~n~ 229 (560)
|.+++..+..|..+++|++|++++|+++ .+|..+..+++|+.|++++|++++..+..+ ..+..+++.+|+
T Consensus 227 N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~ 305 (332)
T 2ft3_A 227 NQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNP 305 (332)
T ss_dssp SCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSS
T ss_pred CcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCc
Confidence 9999888889999999999999999999 788889999999999999999997766543 346778999999
Q ss_pred CC
Q 035761 230 FG 231 (560)
Q Consensus 230 ~~ 231 (560)
+.
T Consensus 306 ~~ 307 (332)
T 2ft3_A 306 VP 307 (332)
T ss_dssp SC
T ss_pred cc
Confidence 87
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=8.4e-28 Score=258.31 Aligned_cols=229 Identities=18% Similarity=0.138 Sum_probs=201.1
Q ss_pred CCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEE
Q 035761 4 LRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLD 83 (560)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 83 (560)
+++++.|++++|.++.+.+..|..+++|++|+|++|.|+++.|..|..+++|+.|+|++|.+++..+..|.++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 57899999999999987777789999999999999999999889999999999999999999998899999999999999
Q ss_pred eecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCC---------------
Q 035761 84 LSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNC--------------- 148 (560)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--------------- 148 (560)
|++|.|++..+..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|.+++.....+.++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~ 209 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAI 209 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEEC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccC
Confidence 99999997777778999999999999999998889999999999999999999986543333222
Q ss_pred ----------------------CCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccC
Q 035761 149 ----------------------SKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSM 206 (560)
Q Consensus 149 ----------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~ 206 (560)
++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++
T Consensus 210 ~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 287 (597)
T 3oja_B 210 PIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 287 (597)
T ss_dssp CTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTT
T ss_pred CchhheeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCC
Confidence 246666666666664 36788999999999999999999999999999999999999
Q ss_pred CccccccCc--ccccCCCCcCCCCCCCCcC
Q 035761 207 NNLSGGIPV--FVRKVPHLDVSGNQFGGEI 234 (560)
Q Consensus 207 n~l~~~~~~--~~~~l~~l~l~~n~~~~~~ 234 (560)
|.+++..+. .++++..|++++|++.+.+
T Consensus 288 N~l~~l~~~~~~l~~L~~L~Ls~N~l~~i~ 317 (597)
T 3oja_B 288 NRLVALNLYGQPIPTLKVLDLSHNHLLHVE 317 (597)
T ss_dssp SCCCEEECSSSCCTTCCEEECCSSCCCCCG
T ss_pred CCCCCCCcccccCCCCcEEECCCCCCCccC
Confidence 999975443 3578999999999998643
No 288
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=5.8e-29 Score=268.93 Aligned_cols=207 Identities=21% Similarity=0.334 Sum_probs=108.1
Q ss_pred CCCCCCCcCCCCEEEccCCcceec-----------------CCcccc--CCCCCCeeeccccccccccccccCCCCCCCE
Q 035761 21 IPPTLGRLSELKILNLSLNSLVGN-----------------IPSNVG--HLTQLTTLAIASNRMNGSILLGIGSLKVLQV 81 (560)
Q Consensus 21 ~~~~~~~l~~L~~L~L~~N~i~~~-----------------~~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 81 (560)
+|..|+++++|++|+|++|.+++. +|..+. ++++|++|+|++|++.+..|..|.++++|++
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 344455555555555555555543 555555 5555555555555555555555555555555
Q ss_pred EEeecCc-cCc-cCCCCcCCC------CCccEEEccCCCccCCCCc--cCCCCCCCcEEECcCCcCcCCCCccCcCCCCC
Q 035761 82 LDLSRNE-IGG-SIPSTLGHL------KWLRSVDLSQNKLVGPIPS--SLGHLTQLTTLNMYNNKLDGPIPPELMNCSKL 151 (560)
Q Consensus 82 L~l~~n~-l~~-~~~~~~~~l------~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 151 (560)
|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .+.++++|+.|++++|.+++.+| .+..+++|
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L 355 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKL 355 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEE
T ss_pred EECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCC
Confidence 5555555 554 444444443 55555555555555 4444 55555555555555555554444 55555555
Q ss_pred cEEEccCcccccccchhhccccc-cceeeccccccCCcCccccCCCc--eeeEEEccCCccccccCcccc----------
Q 035761 152 RILKLGNNLLSGSIPSQIGKLQE-LYYLDLSGNFINGKIPSQLGEFS--CIDTVDLSMNNLSGGIPVFVR---------- 218 (560)
Q Consensus 152 ~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~~~--~L~~l~l~~n~l~~~~~~~~~---------- 218 (560)
+.|++++|.++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|+.|++++|.+++..|..+.
T Consensus 356 ~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~ 433 (636)
T 4eco_A 356 ASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGI 433 (636)
T ss_dssp SEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCC
T ss_pred CEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCC
Confidence 55555555555 44445555555 555555555555 4444444332 555555555555554444332
Q ss_pred cCCCCcCCCCCCC
Q 035761 219 KVPHLDVSGNQFG 231 (560)
Q Consensus 219 ~l~~l~l~~n~~~ 231 (560)
+++.|++++|++.
T Consensus 434 ~L~~L~Ls~N~l~ 446 (636)
T 4eco_A 434 NVSSINLSNNQIS 446 (636)
T ss_dssp CEEEEECCSSCCC
T ss_pred CCCEEECcCCccC
Confidence 3444555555544
No 289
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=2.2e-28 Score=264.34 Aligned_cols=229 Identities=20% Similarity=0.315 Sum_probs=208.2
Q ss_pred CCCCCCCCEEEccCCcCccc-----------------CCCCCC--CcCCCCEEEccCCcceecCCccccCCCCCCeeecc
Q 035761 1 MGRLRNLVHLDLSDNHFMGH-----------------IPPTLG--RLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIA 61 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 61 (560)
|+++++|++|+|++|.+++. +|..+. ++++|++|+|++|++.+.+|..|.++++|++|+|+
T Consensus 202 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 281 (636)
T 4eco_A 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVA 281 (636)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECT
T ss_pred HhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECc
Confidence 45789999999999999985 899999 99999999999999999999999999999999999
Q ss_pred ccc-ccc-ccccccCCC------CCCCEEEeecCccCccCCC--CcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEE
Q 035761 62 SNR-MNG-SILLGIGSL------KVLQVLDLSRNEIGGSIPS--TLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLN 131 (560)
Q Consensus 62 ~n~-i~~-~~~~~~~~l------~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 131 (560)
+|+ +++ ..|..+..+ ++|++|+|++|+++ .+|. .+.++++|+.|+|++|++++.+| .|..+++|+.|+
T Consensus 282 ~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~ 359 (636)
T 4eco_A 282 CNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLN 359 (636)
T ss_dssp TCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEE
T ss_pred CCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEE
Confidence 998 987 788888776 99999999999999 7888 89999999999999999998888 899999999999
Q ss_pred CcCCcCcCCCCccCcCCCC-CcEEEccCcccccccchhhcccc--ccceeeccccccCCcCccccC-------CCceeeE
Q 035761 132 MYNNKLDGPIPPELMNCSK-LRILKLGNNLLSGSIPSQIGKLQ--ELYYLDLSGNFINGKIPSQLG-------EFSCIDT 201 (560)
Q Consensus 132 l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~-------~~~~L~~ 201 (560)
|++|.++ .+|..+..+++ |+.|++++|.++ .+|..+..+. +|++|++++|++++..|..+. .+++|+.
T Consensus 360 L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~ 437 (636)
T 4eco_A 360 LAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSS 437 (636)
T ss_dssp CCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEE
T ss_pred CCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCE
Confidence 9999999 77888999999 999999999999 7788777655 899999999999999998888 7889999
Q ss_pred EEccCCccccccCcc---cccCCCCcCCCCCCCCc
Q 035761 202 VDLSMNNLSGGIPVF---VRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 202 l~l~~n~l~~~~~~~---~~~l~~l~l~~n~~~~~ 233 (560)
|++++|.++..++.. +++++.|++++|++...
T Consensus 438 L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i 472 (636)
T 4eco_A 438 INLSNNQISKFPKELFSTGSPLSSINLMGNMLTEI 472 (636)
T ss_dssp EECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBC
T ss_pred EECcCCccCcCCHHHHccCCCCCEEECCCCCCCCc
Confidence 999999999544433 46788999999999843
No 290
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=246.60 Aligned_cols=214 Identities=19% Similarity=0.173 Sum_probs=189.8
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccc-cccCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSIL-LGIGSLKVL 79 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L 79 (560)
|+++++|++|+|++|+++++.+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++.... ..|.++++|
T Consensus 72 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L 151 (353)
T 2z80_A 72 LQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKL 151 (353)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTC
T ss_pred hccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCC
Confidence 4678999999999999999889999999999999999999997666669999999999999999996655 589999999
Q ss_pred CEEEeecC-ccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccC
Q 035761 80 QVLDLSRN-EIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGN 158 (560)
Q Consensus 80 ~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 158 (560)
++|++++| .++...+..|.++++|++|++++|.+++..|..+..+++|++|++++|.++......+..+++|+.|++++
T Consensus 152 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~ 231 (353)
T 2z80_A 152 QILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRD 231 (353)
T ss_dssp CEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEES
T ss_pred cEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCC
Confidence 99999999 58877788999999999999999999988899999999999999999999754333455689999999999
Q ss_pred cccccc-------------------------------cchhhccccccceeeccccccCCcCccccCCCceeeEEEccCC
Q 035761 159 NLLSGS-------------------------------IPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMN 207 (560)
Q Consensus 159 n~l~~~-------------------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n 207 (560)
|.+++. +|..+..+++|+.|++++|+++...+..|..+++|+.|++++|
T Consensus 232 n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 311 (353)
T 2z80_A 232 TDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTN 311 (353)
T ss_dssp CBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCC
Confidence 999863 3456788999999999999999554445689999999999999
Q ss_pred ccccccC
Q 035761 208 NLSGGIP 214 (560)
Q Consensus 208 ~l~~~~~ 214 (560)
++.+..|
T Consensus 312 ~~~~~~~ 318 (353)
T 2z80_A 312 PWDCSCP 318 (353)
T ss_dssp CBCCCHH
T ss_pred CccCcCC
Confidence 9999887
No 291
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=2.7e-27 Score=256.92 Aligned_cols=132 Identities=25% Similarity=0.307 Sum_probs=89.3
Q ss_pred CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEee
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLS 85 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 85 (560)
++++|||++|+|+++.+.+|.++++|++|+|++|+|+++.|++|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 56777777777776666677777777777777777776666677777777777777777776666667777777777777
Q ss_pred cCccCccCCCCcCCCCCccEEEccCCCccCC-CCccCCCCCCCcEEECcCCcC
Q 035761 86 RNEIGGSIPSTLGHLKWLRSVDLSQNKLVGP-IPSSLGHLTQLTTLNMYNNKL 137 (560)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l 137 (560)
+|+|+++.+..|+++++|++|+|++|.+++. .|..+..+++|++|+|++|++
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 7777765555666677777777777766532 345555666666666655544
No 292
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.95 E-value=3.2e-27 Score=227.97 Aligned_cols=207 Identities=22% Similarity=0.210 Sum_probs=123.9
Q ss_pred CCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEE
Q 035761 4 LRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLD 83 (560)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 83 (560)
+++|+.|++++|.++.. ..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++..+..|.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 45566666666666532 2355666666666666666542 3556666666666666666655555566666666666
Q ss_pred eecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccc
Q 035761 84 LSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSG 163 (560)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 163 (560)
|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|+.|++++|++++..+..+..+++|+.|++++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 66666665555556666666666666666665555555666666666666666665555555666666666666666665
Q ss_pred ccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccCC
Q 035761 164 SIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVP 221 (560)
Q Consensus 164 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~ 221 (560)
..+..|..+++|+.|++++|++.+ .+++|+.+++..|.++|.+|..+..+.
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 196 VPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred cCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccC
Confidence 555556666666666666666553 233455556666666666665554443
No 293
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.95 E-value=2.5e-27 Score=255.72 Aligned_cols=209 Identities=21% Similarity=0.173 Sum_probs=164.9
Q ss_pred CCCCcCCCCEEEccCCcceec--CCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCC-CCcCCC
Q 035761 24 TLGRLSELKILNLSLNSLVGN--IPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIP-STLGHL 100 (560)
Q Consensus 24 ~~~~l~~L~~L~L~~N~i~~~--~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l 100 (560)
.+..+++|++|++++|.+++. .|..+..+++|+.|+|++|.+++ .+..|.++++|++|++++|++++..+ ..+.++
T Consensus 345 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 423 (606)
T 3vq2_A 345 KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL 423 (606)
T ss_dssp CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTC
T ss_pred hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhcc
Confidence 455677777777777777755 37777888888888888888774 45778888888888888888887666 577888
Q ss_pred CCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcC-CCCccCcCCCCCcEEEccCcccccccchhhccccccceee
Q 035761 101 KWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDG-PIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLD 179 (560)
Q Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 179 (560)
++|++|++++|.+++..|..+.++++|++|++++|.+++ ..|..+..+++|+.|++++|++++..|..|..+++|++|+
T Consensus 424 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEE
Confidence 888888888888887788888888888888888888886 4677888888888888888888877788888888888888
Q ss_pred ccccccCCcCccccCCCceeeEEEccCCccccccCc--ccc-cCCCCcCCCCCCCCc
Q 035761 180 LSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV--FVR-KVPHLDVSGNQFGGE 233 (560)
Q Consensus 180 l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~--~~~-~l~~l~l~~n~~~~~ 233 (560)
+++|++++..|..+..+++|+.|++++|+++..++. .+. +++.+++.+|++.|.
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccC
Confidence 888888887788888888888888888888843332 122 477788888888765
No 294
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.95 E-value=4.6e-28 Score=233.89 Aligned_cols=227 Identities=19% Similarity=0.203 Sum_probs=199.5
Q ss_pred CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEee
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLS 85 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 85 (560)
++..+++.++.+.+. ..+..+++|+.|++++|.++.. ..+..+++|++|+|++|++++. ..+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 344566777777654 3367889999999999999843 4588999999999999999863 478999999999999
Q ss_pred cCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccccc
Q 035761 86 RNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSI 165 (560)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 165 (560)
+|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|.+++..+..+..+++|+.|++++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 99999888888999999999999999999888888999999999999999999888888899999999999999999888
Q ss_pred chhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccCCCCcCCCCCCCCcCCcccCCCC
Q 035761 166 PSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVPHLDVSGNQFGGEIPTTLANVP 242 (560)
Q Consensus 166 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~l~~n~~~~~~p~~~~~~~ 242 (560)
+..|..+++|++|++++|++++..+..+..+++|+.|++++|++.+.+| ++..+++..|.+.|.+|......+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~----~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT----TTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc----HHHHHHHHHHhCCCcccCcccccC
Confidence 8888999999999999999998888889999999999999999998765 567788888998888777655443
No 295
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=4e-27 Score=249.31 Aligned_cols=88 Identities=25% Similarity=0.312 Sum_probs=45.8
Q ss_pred cCCCCCcEEEccCcccccccchhhccccccceeeccccccCC--cCccccCCCceeeEEEccCCccccccCc----cccc
Q 035761 146 MNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFING--KIPSQLGEFSCIDTVDLSMNNLSGGIPV----FVRK 219 (560)
Q Consensus 146 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~~~~L~~l~l~~n~l~~~~~~----~~~~ 219 (560)
..+++|+.|++++|.+++..|..+..+++|++|++++|++++ .+|..+..+++|+.|++++|.+++.+|. .+.+
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 344555555555555555555555555555555555555554 2334455555555555555555543332 1234
Q ss_pred CCCCcCCCCCCCCc
Q 035761 220 VPHLDVSGNQFGGE 233 (560)
Q Consensus 220 l~~l~l~~n~~~~~ 233 (560)
++.|++++|++.+.
T Consensus 401 L~~L~Ls~N~l~~~ 414 (520)
T 2z7x_B 401 LLSLNMSSNILTDT 414 (520)
T ss_dssp CCEEECCSSCCCGG
T ss_pred CCEEECcCCCCCcc
Confidence 45555555555443
No 296
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=1.7e-26 Score=252.67 Aligned_cols=231 Identities=24% Similarity=0.242 Sum_probs=117.6
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcce--ecCCccccCC--CCCCeeeccccccccccccccCCCC
Q 035761 2 GRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLV--GNIPSNVGHL--TQLTTLAIASNRMNGSILLGIGSLK 77 (560)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~~~~~~~l--~~L~~L~L~~n~i~~~~~~~~~~l~ 77 (560)
+.+++|++|++++|.++++.+..|.++++|++|++++|.+. .+.+..|..+ ++|+.|+|++|++++..+..|.+++
T Consensus 326 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~ 405 (680)
T 1ziw_A 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLG 405 (680)
T ss_dssp TTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred ccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCC
Confidence 45778888888888888877777888877777777766422 1222222221 3445555555555544455555555
Q ss_pred CCCEEEeecCccCccCC-CCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCc--CCCCccCcCCCCCcEE
Q 035761 78 VLQVLDLSRNEIGGSIP-STLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLD--GPIPPELMNCSKLRIL 154 (560)
Q Consensus 78 ~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L 154 (560)
+|++|+|++|.+++.++ ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|+.|
T Consensus 406 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L 485 (680)
T 1ziw_A 406 HLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTIL 485 (680)
T ss_dssp TCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEE
T ss_pred CCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEE
Confidence 55555555555543333 34555555555555555555444444444455555555544443 2334444444445555
Q ss_pred EccCcccccccchhhccccccceeeccccccCCcCc--------cccCCCceeeEEEccCCccccccCcc---cccCCCC
Q 035761 155 KLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIP--------SQLGEFSCIDTVDLSMNNLSGGIPVF---VRKVPHL 223 (560)
Q Consensus 155 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--------~~~~~~~~L~~l~l~~n~l~~~~~~~---~~~l~~l 223 (560)
++++|++++..+..|..+++|++|++++|++++..+ ..+..+++|+.|++++|.++...+.. +.+++.|
T Consensus 486 ~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 565 (680)
T 1ziw_A 486 DLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKII 565 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCccee
Confidence 555554444444444444444444444444443211 12344444444444444444322221 2333444
Q ss_pred cCCCCCCCC
Q 035761 224 DVSGNQFGG 232 (560)
Q Consensus 224 ~l~~n~~~~ 232 (560)
++++|++.+
T Consensus 566 ~Ls~N~l~~ 574 (680)
T 1ziw_A 566 DLGLNNLNT 574 (680)
T ss_dssp ECCSSCCCC
T ss_pred ECCCCCCCc
Confidence 444444443
No 297
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=7.1e-28 Score=237.44 Aligned_cols=221 Identities=23% Similarity=0.259 Sum_probs=142.6
Q ss_pred CCEEEccCCcCc-ccCCCCCC-------CcCCCCEEEccCCcceecCCccc--cCCCCCCeeeccccccccccccccCCC
Q 035761 7 LVHLDLSDNHFM-GHIPPTLG-------RLSELKILNLSLNSLVGNIPSNV--GHLTQLTTLAIASNRMNGSILLGIGSL 76 (560)
Q Consensus 7 L~~L~L~~n~l~-~~~~~~~~-------~l~~L~~L~L~~N~i~~~~~~~~--~~l~~L~~L~L~~n~i~~~~~~~~~~l 76 (560)
|++|+|++|.++ ..+|..+. ++++|++|+|++|++++..|..+ ..+++|++|+|++|++++. |..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 566677777774 23444333 56777777777777776666665 6777777777777777755 5555555
Q ss_pred -----CCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCC--CCccC--CCCCCCcEEECcCCcCcCC---CCcc
Q 035761 77 -----KVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGP--IPSSL--GHLTQLTTLNMYNNKLDGP---IPPE 144 (560)
Q Consensus 77 -----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~--~~l~~L~~L~l~~n~l~~~---~~~~ 144 (560)
++|++|+|++|++++..+..|.++++|++|+|++|++.+. .+..+ ..+++|++|+|++|++++. ....
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 6777777777777766667777777777777777776543 12222 6677777777777777621 1123
Q ss_pred CcCCCCCcEEEccCcccccccc-hhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc--ccccCC
Q 035761 145 LMNCSKLRILKLGNNLLSGSIP-SQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV--FVRKVP 221 (560)
Q Consensus 145 ~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~--~~~~l~ 221 (560)
+..+++|+.|++++|++++..| ..+..+++|++|+|++|+|+ .+|..+. ++|+.|++++|++++. |. .+++++
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~ 299 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQVG 299 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEEE
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCCC
Confidence 3456777777777777776553 34555677777777777776 5555554 6777777777777755 32 234556
Q ss_pred CCcCCCCCCCC
Q 035761 222 HLDVSGNQFGG 232 (560)
Q Consensus 222 ~l~l~~n~~~~ 232 (560)
.|++++|++.+
T Consensus 300 ~L~L~~N~l~~ 310 (312)
T 1wwl_A 300 NLSLKGNPFLD 310 (312)
T ss_dssp EEECTTCTTTC
T ss_pred EEeccCCCCCC
Confidence 66777777664
No 298
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=8.1e-27 Score=249.18 Aligned_cols=104 Identities=29% Similarity=0.280 Sum_probs=47.9
Q ss_pred CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEee
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLS 85 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 85 (560)
+|++|+|++|.|+++.+..|.++++|++|+|++|+|+++.|+.|.++++|++|+|++|+++. +|.. .+++|++|+|+
T Consensus 53 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~Ls 129 (562)
T 3a79_B 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC--PMASLRHLDLS 129 (562)
T ss_dssp TCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC--CCTTCSEEECC
T ss_pred CcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc--ccccCCEEECC
Confidence 44555555555554444445555555555555555554444455555555555555554442 2222 34444444444
Q ss_pred cCccCcc-CCCCcCCCCCccEEEccCCC
Q 035761 86 RNEIGGS-IPSTLGHLKWLRSVDLSQNK 112 (560)
Q Consensus 86 ~n~l~~~-~~~~~~~l~~L~~L~l~~n~ 112 (560)
+|++++. .|..|.++++|++|+|++|.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~ 157 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAK 157 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSB
T ss_pred CCCccccCchHhhcccCcccEEecCCCc
Confidence 4444432 12344444444444444443
No 299
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=6e-28 Score=238.53 Aligned_cols=217 Identities=24% Similarity=0.244 Sum_probs=186.2
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEE
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+ |..+++|++|+|++|++++.. ..++|++|
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L 104 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETL 104 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEE
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEE
Confidence 46789999999999998888899999999999999999997654 999999999999999998544 23899999
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccC-cCCCCCcEEEccCccc
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPEL-MNCSKLRILKLGNNLL 161 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l 161 (560)
++++|++++..+.. +++|++|++++|++++..+..+..+++|++|+|++|.+++..+..+ ..+++|+.|++++|.+
T Consensus 105 ~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 181 (317)
T 3o53_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (317)
T ss_dssp ECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcC
Confidence 99999999765544 5789999999999998878899999999999999999998777766 4789999999999999
Q ss_pred ccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc--ccccCCCCcCCCCCCCC
Q 035761 162 SGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV--FVRKVPHLDVSGNQFGG 232 (560)
Q Consensus 162 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~--~~~~l~~l~l~~n~~~~ 232 (560)
++. +. ...+++|++|+|++|++++. |..+..+++|+.|++++|++++.++. .+.+++.|++++|++.|
T Consensus 182 ~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 182 YDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp CEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBH
T ss_pred ccc-cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccC
Confidence 855 32 34589999999999999954 44588999999999999999954322 34678889999999874
No 300
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=3.7e-28 Score=255.96 Aligned_cols=186 Identities=16% Similarity=0.223 Sum_probs=147.2
Q ss_pred cccceeeccCCeeEEEEEeCCCcEEEEEEccchh------hhhhhHHHHHHHHHHHhccCCCCcceeeeEEEeCCEEEEE
Q 035761 318 DIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLE------TELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 318 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 391 (560)
...+.||+|+||.||+|.. .++.+++|+..... ......+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999965 47788888754322 1122245689999999999999999777777777788999
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCC
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY 471 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 471 (560)
|||+++|+|.+++.. +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999975 458999999999999999 9999999999999998 999999999998753
Q ss_pred CCCC-------ceeeccccCccCcccccc--CccCcchhHHHHHHHHHHHHhCCCCCC
Q 035761 472 DSSN-------RTLLAGTYGSIAPELAYT--MVVTEKYDVYSFGVVALEVLMGKHPGE 520 (560)
Q Consensus 472 ~~~~-------~~~~~g~~~~~aPE~~~~--~~~~~~~Dv~s~G~il~el~~g~~P~~ 520 (560)
.... .....||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2211 134579999999999987 567888999999999999888887764
No 301
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=7e-28 Score=265.23 Aligned_cols=227 Identities=24% Similarity=0.336 Sum_probs=196.6
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEc-cCCcceec---------------------------------------
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNL-SLNSLVGN--------------------------------------- 44 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L-~~N~i~~~--------------------------------------- 44 (560)
.+++.|+|++|++++.+|+.|+++++|++|+| ++|.+.+.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46899999999999999999999999999999 77754333
Q ss_pred -------------------------------------CCccccCCCCCCeeecccccccc-----------------ccc
Q 035761 45 -------------------------------------IPSNVGHLTQLTTLAIASNRMNG-----------------SIL 70 (560)
Q Consensus 45 -------------------------------------~~~~~~~l~~L~~L~L~~n~i~~-----------------~~~ 70 (560)
+|..|.++++|+.|+|++|++++ .+|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 78889999999999999999997 378
Q ss_pred cccC--CCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCC-ccC-CCCccCCCCC-------CCcEEECcCCcCcC
Q 035761 71 LGIG--SLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNK-LVG-PIPSSLGHLT-------QLTTLNMYNNKLDG 139 (560)
Q Consensus 71 ~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~-~~~~~~~~l~-------~L~~L~l~~n~l~~ 139 (560)
..++ ++++|++|+|++|++.+.+|..|.++++|+.|+|++|+ +++ .+|..+.+++ +|+.|+|++|.++
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~- 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE- 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-
T ss_pred hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-
Confidence 8877 99999999999999998999999999999999999998 887 6776555544 9999999999999
Q ss_pred CCCc--cCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCce-eeEEEccCCccccccCcc
Q 035761 140 PIPP--ELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSC-IDTVDLSMNNLSGGIPVF 216 (560)
Q Consensus 140 ~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~-L~~l~l~~n~l~~~~~~~ 216 (560)
.+|. .+.++++|+.|+|++|.++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|++++|+++ .+|..
T Consensus 562 ~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~ 637 (876)
T 4ecn_A 562 EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI 637 (876)
T ss_dssp BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC
T ss_pred ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchh
Confidence 7777 8999999999999999998 777 8999999999999999999 78888999998 999999999998 66664
Q ss_pred cc-----cCCCCcCCCCCCCCcCCc
Q 035761 217 VR-----KVPHLDVSGNQFGGEIPT 236 (560)
Q Consensus 217 ~~-----~l~~l~l~~n~~~~~~p~ 236 (560)
+. +++.|++++|++.+.+|.
T Consensus 638 ~~~~~~~~L~~L~Ls~N~l~g~ip~ 662 (876)
T 4ecn_A 638 FNAKSVYVMGSVDFSYNKIGSEGRN 662 (876)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTSSS
T ss_pred hhccccCCCCEEECcCCcCCCcccc
Confidence 43 377889999999886553
No 302
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2e-28 Score=241.46 Aligned_cols=223 Identities=20% Similarity=0.210 Sum_probs=118.3
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcce-ecCCcccc-------CCCCCCeeecccccccccccccc--C
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLV-GNIPSNVG-------HLTQLTTLAIASNRMNGSILLGI--G 74 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~-------~l~~L~~L~L~~n~i~~~~~~~~--~ 74 (560)
++|++|++++|.+ .+|..+... |++|+|++|.++ ...|..+. ++++|++|+|++|++++..|..+ .
T Consensus 43 ~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 43 RSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp EECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 3455566666665 344433322 555666666653 23333333 45566666666666655555544 5
Q ss_pred CCCCCCEEEeecCccCccCCCCcCCC-----CCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCC--CCccC--
Q 035761 75 SLKVLQVLDLSRNEIGGSIPSTLGHL-----KWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGP--IPPEL-- 145 (560)
Q Consensus 75 ~l~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~-- 145 (560)
.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..|.++++|++|+|++|++.+. .+..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 566666666666666644 5545444 5566666666666555555566666666666666655432 12222
Q ss_pred cCCCCCcEEEccCccccc---ccchhhccccccceeeccccccCCcCc-cccCCCceeeEEEccCCccccccCccc-ccC
Q 035761 146 MNCSKLRILKLGNNLLSG---SIPSQIGKLQELYYLDLSGNFINGKIP-SQLGEFSCIDTVDLSMNNLSGGIPVFV-RKV 220 (560)
Q Consensus 146 ~~l~~L~~L~l~~n~l~~---~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~l~l~~n~l~~~~~~~~-~~l 220 (560)
..+++|+.|++++|.+++ .....+..+++|++|++++|++++..| ..+..+++|+.|++++|.++ .+|..+ .++
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L 276 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKL 276 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEE
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCc
Confidence 555666666666666552 111223455566666666666655443 33444556666666666665 333322 355
Q ss_pred CCCcCCCCCCCCc
Q 035761 221 PHLDVSGNQFGGE 233 (560)
Q Consensus 221 ~~l~l~~n~~~~~ 233 (560)
+.|++++|++.+.
T Consensus 277 ~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 277 SVLDLSYNRLDRN 289 (312)
T ss_dssp EEEECCSSCCCSC
T ss_pred eEEECCCCCCCCC
Confidence 5566666665544
No 303
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=4.8e-26 Score=219.52 Aligned_cols=202 Identities=23% Similarity=0.248 Sum_probs=183.9
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEc
Q 035761 29 SELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDL 108 (560)
Q Consensus 29 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 108 (560)
.+++.+++++|.++ .+|..+. ++|+.|+|++|+++...+..|.++++|++|+|++|.++...+..|.++++|++|+|
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 46889999999999 5666554 68999999999999888889999999999999999999777778899999999999
Q ss_pred cCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCc
Q 035761 109 SQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGK 188 (560)
Q Consensus 109 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 188 (560)
++|++++..+..|.++++|++|+|++|.+++..+..|..+++|+.|++++|.+++..+..|..+++|++|++++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999988888899999999999999999988888899999999999999999987777799999999999999999988
Q ss_pred CccccCCCceeeEEEccCCccccccCccc---ccCCCCcCCCCCCCCc
Q 035761 189 IPSQLGEFSCIDTVDLSMNNLSGGIPVFV---RKVPHLDVSGNQFGGE 233 (560)
Q Consensus 189 ~~~~~~~~~~L~~l~l~~n~l~~~~~~~~---~~l~~l~l~~n~~~~~ 233 (560)
.+..|..+++|+.|++++|++++..+..+ .+++.|++.+|++.|.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 88889999999999999999997776544 5778899999999875
No 304
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.94 E-value=5.2e-27 Score=248.45 Aligned_cols=225 Identities=23% Similarity=0.263 Sum_probs=155.1
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|+|++|.++++.|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|+. +|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEec
Confidence 467778888888776666777777888888888888777777777778888888888887774 3333 6777777777
Q ss_pred ecCccCcc-CCCCcCCCCCccEEEccCCCccCCCCccCCCCCCC--cEEECcCCcC--cCCCCccCcCCC----------
Q 035761 85 SRNEIGGS-IPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQL--TTLNMYNNKL--DGPIPPELMNCS---------- 149 (560)
Q Consensus 85 ~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L--~~L~l~~n~l--~~~~~~~~~~l~---------- 149 (560)
++|.+++. .|..|+++++|++|++++|.+++ ..+..+++| +.|++++|.+ .+..|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 77777753 56677777777777777777653 234444444 5555555555 333333333321
Q ss_pred -------------------------------------------------------------------------CCcEEEc
Q 035761 150 -------------------------------------------------------------------------KLRILKL 156 (560)
Q Consensus 150 -------------------------------------------------------------------------~L~~L~l 156 (560)
+|+.|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 4555555
Q ss_pred cCcccccccchhh-----------------------------------------------------ccccccceeecccc
Q 035761 157 GNNLLSGSIPSQI-----------------------------------------------------GKLQELYYLDLSGN 183 (560)
Q Consensus 157 ~~n~l~~~~~~~~-----------------------------------------------------~~l~~L~~L~l~~n 183 (560)
++|.+++.+|..+ ..+++|++|++++|
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n 334 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred ecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECC
Confidence 5555554333332 56788888999999
Q ss_pred ccCCcCccccCCCceeeEEEccCCcccc--ccCc---ccccCCCCcCCCCCCCCcCC
Q 035761 184 FINGKIPSQLGEFSCIDTVDLSMNNLSG--GIPV---FVRKVPHLDVSGNQFGGEIP 235 (560)
Q Consensus 184 ~l~~~~~~~~~~~~~L~~l~l~~n~l~~--~~~~---~~~~l~~l~l~~n~~~~~~p 235 (560)
++++..|..+..+++|+.|++++|++++ .+|. .+.+++.|++++|++.+..|
T Consensus 335 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ 391 (520)
T 2z7x_B 335 LLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEK 391 (520)
T ss_dssp CCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGG
T ss_pred ccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccc
Confidence 9888788888888999999999998886 3343 44677888899998887434
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=6.8e-27 Score=252.34 Aligned_cols=213 Identities=22% Similarity=0.173 Sum_probs=197.2
Q ss_pred CCCCCCCCEEEccCCcCccc--CCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccc-cccCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGH--IPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSIL-LGIGSLK 77 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~ 77 (560)
+..+++|++|++++|.+++. .+..+..+++|++|++++|.+++ .|..|.++++|+.|++++|++.+..+ ..|.+++
T Consensus 346 ~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 424 (606)
T 3vq2_A 346 KVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLE 424 (606)
T ss_dssp CCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCT
T ss_pred hccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccc
Confidence 35789999999999999866 47889999999999999999994 66899999999999999999998777 7899999
Q ss_pred CCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccC-CCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEc
Q 035761 78 VLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVG-PIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKL 156 (560)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 156 (560)
+|++|++++|.+++..|..+.++++|++|++++|.+++ ..|..+..+++|+.|+|++|++++..|..+..+++|+.|++
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 504 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 504 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEEC
Confidence 99999999999999899999999999999999999997 47889999999999999999999988999999999999999
Q ss_pred cCcccccccchhhccccccceeeccccccCCcCccccCCCc-eeeEEEccCCccccccCc
Q 035761 157 GNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFS-CIDTVDLSMNNLSGGIPV 215 (560)
Q Consensus 157 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-~L~~l~l~~n~l~~~~~~ 215 (560)
++|++++..|..|..+++|++|++++|+++ .+|..+..++ +|+.|++++|++.+..+.
T Consensus 505 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 505 SHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999988999999999999999999999 6677788887 599999999999987764
No 306
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=259.39 Aligned_cols=232 Identities=22% Similarity=0.239 Sum_probs=152.3
Q ss_pred CCCCCCCCEEEccCCcCcc-cCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccc--cCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMG-HIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLG--IGSLK 77 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~--~~~l~ 77 (560)
|+++++|++|+|++|.+.+ +.|..|.++++|++|+|++|.|++..|+.|.++++|++|+|++|.+++..+.. |.+++
T Consensus 44 ~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~ 123 (844)
T 3j0a_A 44 FPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLK 123 (844)
T ss_dssp CSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCS
T ss_pred CcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccC
Confidence 4677788888888885443 34777888888888888888888777888888888888888888887644443 77888
Q ss_pred CCCEEEeecCccCccCC-CCcCCCCCccEEEccCCCccCCCCccCCCC--------------------------------
Q 035761 78 VLQVLDLSRNEIGGSIP-STLGHLKWLRSVDLSQNKLVGPIPSSLGHL-------------------------------- 124 (560)
Q Consensus 78 ~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------------------------------- 124 (560)
+|++|+|++|.+++..+ ..|.++++|++|+|++|.+++..+..+..+
T Consensus 124 ~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~ 203 (844)
T 3j0a_A 124 ALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRN 203 (844)
T ss_dssp SCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTT
T ss_pred CCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCcccc
Confidence 88888888888876544 467778888888888777765444333221
Q ss_pred --------------------------------------------------------------CCCcEEECcCCcCcCCCC
Q 035761 125 --------------------------------------------------------------TQLTTLNMYNNKLDGPIP 142 (560)
Q Consensus 125 --------------------------------------------------------------~~L~~L~l~~n~l~~~~~ 142 (560)
++|+.|+|++|.+.+..+
T Consensus 204 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~ 283 (844)
T 3j0a_A 204 MVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS 283 (844)
T ss_dssp CCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS
T ss_pred CceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccCh
Confidence 234444444444444444
Q ss_pred ccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcc---ccc
Q 035761 143 PELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVF---VRK 219 (560)
Q Consensus 143 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~---~~~ 219 (560)
..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+.. +.+
T Consensus 284 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 363 (844)
T 3j0a_A 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK 363 (844)
T ss_dssp CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCC
T ss_pred hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCC
Confidence 45555666666666666666555666666666666666666666555666666666666666666665554433 345
Q ss_pred CCCCcCCCCCCCC
Q 035761 220 VPHLDVSGNQFGG 232 (560)
Q Consensus 220 l~~l~l~~n~~~~ 232 (560)
++.|++++|.+.+
T Consensus 364 L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 364 LQTLDLRDNALTT 376 (844)
T ss_dssp CCEEEEETCCSCC
T ss_pred CCEEECCCCCCCc
Confidence 5556666666654
No 307
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.94 E-value=1.2e-26 Score=247.74 Aligned_cols=107 Identities=22% Similarity=0.193 Sum_probs=76.4
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccc-cccccCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGS-ILLGIGSLKVL 79 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L 79 (560)
|+++++|++|+|++|+|+++.|+.|.++++|++|+|++|+|+. +|.. .+++|++|+|++|++++. .|..|.++++|
T Consensus 72 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L 148 (562)
T 3a79_B 72 ISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKL 148 (562)
T ss_dssp TTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTC
T ss_pred hccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcc
Confidence 4567788888888888887777888888888888888888874 4444 678888888888888764 35678888888
Q ss_pred CEEEeecCccCccCCCCcCCCCCc--cEEEccCCCc
Q 035761 80 QVLDLSRNEIGGSIPSTLGHLKWL--RSVDLSQNKL 113 (560)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~~L--~~L~l~~n~l 113 (560)
++|+|++|+++.. .+..+++| +.|++++|.+
T Consensus 149 ~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 149 TFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred cEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 8888888877642 23333333 6666665555
No 308
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=6.6e-27 Score=257.51 Aligned_cols=228 Identities=21% Similarity=0.236 Sum_probs=199.6
Q ss_pred CCCCCCCCEEEccCCcCcc-----------------cCCCCCC--CcCCCCEEEccCCcceecCCccccCCCCCCeeecc
Q 035761 1 MGRLRNLVHLDLSDNHFMG-----------------HIPPTLG--RLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIA 61 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 61 (560)
|+++++|++|+|++|.+++ .+|..++ ++++|++|+|++|++.+.+|..|.++++|+.|+|+
T Consensus 444 l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls 523 (876)
T 4ecn_A 444 IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIA 523 (876)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECT
T ss_pred HhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECc
Confidence 4578999999999999998 3888877 99999999999999999999999999999999999
Q ss_pred ccc-ccc-ccccccC-------CCCCCCEEEeecCccCccCCC--CcCCCCCccEEEccCCCccCCCCccCCCCCCCcEE
Q 035761 62 SNR-MNG-SILLGIG-------SLKVLQVLDLSRNEIGGSIPS--TLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTL 130 (560)
Q Consensus 62 ~n~-i~~-~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 130 (560)
+|+ +++ ..|..+. .+++|++|+|++|+++ .+|. .+.++++|+.|+|++|+++ .+| .|.++++|+.|
T Consensus 524 ~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L 600 (876)
T 4ecn_A 524 CNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDL 600 (876)
T ss_dssp TCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEE
T ss_pred CCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEE
Confidence 998 887 6676554 4559999999999999 7888 8999999999999999999 777 89999999999
Q ss_pred ECcCCcCcCCCCccCcCCCC-CcEEEccCcccccccchhhccccc--cceeeccccccCCcCcccc---C--CCceeeEE
Q 035761 131 NMYNNKLDGPIPPELMNCSK-LRILKLGNNLLSGSIPSQIGKLQE--LYYLDLSGNFINGKIPSQL---G--EFSCIDTV 202 (560)
Q Consensus 131 ~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~~---~--~~~~L~~l 202 (560)
+|++|.++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |+.|+|++|++.+.+|... . .+++|+.|
T Consensus 601 ~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L 678 (876)
T 4ecn_A 601 KLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTV 678 (876)
T ss_dssp ECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEE
T ss_pred ECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEE
Confidence 99999999 78888999999 999999999999 77888877654 9999999999998766432 2 34589999
Q ss_pred EccCCccccccCc---ccccCCCCcCCCCCCCCc
Q 035761 203 DLSMNNLSGGIPV---FVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 203 ~l~~n~l~~~~~~---~~~~l~~l~l~~n~~~~~ 233 (560)
++++|.++..++. .+++++.|++++|++...
T Consensus 679 ~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~i 712 (876)
T 4ecn_A 679 TLSYNEIQKFPTELFATGSPISTIILSNNLMTSI 712 (876)
T ss_dssp ECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCC
T ss_pred EccCCcCCccCHHHHccCCCCCEEECCCCcCCcc
Confidence 9999999944333 246889999999999843
No 309
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=4.7e-26 Score=221.54 Aligned_cols=203 Identities=24% Similarity=0.241 Sum_probs=182.1
Q ss_pred CCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCcc
Q 035761 25 LGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLR 104 (560)
Q Consensus 25 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 104 (560)
+.++++++++++++|.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.|++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 678899999999999999 5565554 7899999999999988899999999999999999999965443 7899999
Q ss_pred EEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccc
Q 035761 105 SVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNF 184 (560)
Q Consensus 105 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 184 (560)
+|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999999 678889999999999999999998888899999999999999999998888889999999999999999
Q ss_pred cCCcCccccCCCceeeEEEccCCccccccCccc--ccCCCCcCCCCCCCCc
Q 035761 185 INGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV--RKVPHLDVSGNQFGGE 233 (560)
Q Consensus 185 l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~--~~l~~l~l~~n~~~~~ 233 (560)
++...+..|..+++|+.|++++|+++..++..+ .+++.+++.+|++.|.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 997777788999999999999999995444433 4688899999999875
No 310
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=3.3e-26 Score=243.96 Aligned_cols=231 Identities=22% Similarity=0.207 Sum_probs=147.9
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccc-cccccCCCCCCC
Q 035761 2 GRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGS-ILLGIGSLKVLQ 80 (560)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~ 80 (560)
+++++|++|+|++|++++..|+.|.++++|++|+|++|++++..|..|.++++|++|+|++|++++. .+..|.++++|+
T Consensus 47 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 126 (549)
T 2z81_A 47 RACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126 (549)
T ss_dssp SSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCC
T ss_pred hcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCcc
Confidence 4556666666666666666666666666666666666666655555566666666666666666542 345566666666
Q ss_pred EEEeecCc-cCccCCCCcCCCCCccEEEccCCCccCCCCccCCC------------------------CCCCcEEECcCC
Q 035761 81 VLDLSRNE-IGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGH------------------------LTQLTTLNMYNN 135 (560)
Q Consensus 81 ~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------------------------l~~L~~L~l~~n 135 (560)
+|++++|. ++...+..|.++++|++|++++|.+++..|..+.. +++|++|++++|
T Consensus 127 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 206 (549)
T 2z81_A 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206 (549)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESC
T ss_pred EEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCC
Confidence 66666665 33333345666666667777666666555555443 445555666666
Q ss_pred cCcCC---------------------------------------------------------------------------
Q 035761 136 KLDGP--------------------------------------------------------------------------- 140 (560)
Q Consensus 136 ~l~~~--------------------------------------------------------------------------- 140 (560)
++++.
T Consensus 207 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L 286 (549)
T 2z81_A 207 NLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETV 286 (549)
T ss_dssp BCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEE
T ss_pred ccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccc
Confidence 55542
Q ss_pred --------------------------------------CCccC-cCCCCCcEEEccCcccccccch---hhcccccccee
Q 035761 141 --------------------------------------IPPEL-MNCSKLRILKLGNNLLSGSIPS---QIGKLQELYYL 178 (560)
Q Consensus 141 --------------------------------------~~~~~-~~l~~L~~L~l~~n~l~~~~~~---~~~~l~~L~~L 178 (560)
+|..+ ..+++|+.|++++|++++..|. .+..+++|++|
T Consensus 287 ~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L 366 (549)
T 2z81_A 287 TIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTL 366 (549)
T ss_dssp EEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEE
T ss_pred cccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEE
Confidence 11111 3477888899999988876543 36778888888
Q ss_pred eccccccCCcCc--cccCCCceeeEEEccCCccccccCc---ccccCCCCcCCCCCCCCc
Q 035761 179 DLSGNFINGKIP--SQLGEFSCIDTVDLSMNNLSGGIPV---FVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 179 ~l~~n~l~~~~~--~~~~~~~~L~~l~l~~n~l~~~~~~---~~~~l~~l~l~~n~~~~~ 233 (560)
++++|++++..+ ..+..+++|+.|++++|+++. +|. .+.+++.|++++|.+...
T Consensus 367 ~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~~l 425 (549)
T 2z81_A 367 VLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIRVV 425 (549)
T ss_dssp ECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCSCC
T ss_pred EccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCcccc
Confidence 888888875533 457778888888888888874 443 235677777888877643
No 311
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.94 E-value=3.9e-26 Score=216.02 Aligned_cols=205 Identities=15% Similarity=0.122 Sum_probs=156.4
Q ss_pred CcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccc-cccccccccCCCCCCCEEEeec-CccCccCC
Q 035761 17 FMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNR-MNGSILLGIGSLKVLQVLDLSR-NEIGGSIP 94 (560)
Q Consensus 17 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~ 94 (560)
++ .+|. +. ++|++|+|++|+++++.+..|.++++|++|+|++|+ ++.+.+..|.++++|++|++++ |++++..+
T Consensus 23 l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~ 98 (239)
T 2xwt_C 23 IQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP 98 (239)
T ss_dssp CS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT
T ss_pred cc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH
Confidence 55 4455 43 478888888888887777778888888888888886 7766677788888888888887 88887666
Q ss_pred CCcCCCCCccEEEccCCCccCCCCccCCCCCCCc---EEECcCC-cCcCCCCccCcCCCCCc-EEEccCcccccccchhh
Q 035761 95 STLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLT---TLNMYNN-KLDGPIPPELMNCSKLR-ILKLGNNLLSGSIPSQI 169 (560)
Q Consensus 95 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~---~L~l~~n-~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~ 169 (560)
..|.++++|++|++++|.+++ +|. |..+++|+ .|++++| .+++..+..|..+++|+ .|++++|.++...+..|
T Consensus 99 ~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~ 176 (239)
T 2xwt_C 99 DALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAF 176 (239)
T ss_dssp TSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTT
T ss_pred HHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhc
Confidence 778888888888888888875 554 77777777 8888888 88766666788888888 88888888874444445
Q ss_pred ccccccceeeccccc-cCCcCccccCCC-ceeeEEEccCCccccccCcccccCCCCcCCCC
Q 035761 170 GKLQELYYLDLSGNF-INGKIPSQLGEF-SCIDTVDLSMNNLSGGIPVFVRKVPHLDVSGN 228 (560)
Q Consensus 170 ~~l~~L~~L~l~~n~-l~~~~~~~~~~~-~~L~~l~l~~n~l~~~~~~~~~~l~~l~l~~n 228 (560)
.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++..+..+.+++.|++.++
T Consensus 177 ~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 177 NG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp TT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred CC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChhHhccCceeeccCc
Confidence 44 788888888884 876667777888 88888888888888766666777887777765
No 312
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=3.4e-26 Score=216.42 Aligned_cols=198 Identities=16% Similarity=0.164 Sum_probs=175.8
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCc-ceecCCccccCCCCCCeeeccc-cccccccccccCCCCCCCEE
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNS-LVGNIPSNVGHLTQLTTLAIAS-NRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L 82 (560)
++|++|+|++|+++++.+..|.++++|++|++++|+ ++.+.+..|.++++|++|+|++ |+++...+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999998888899999999999999997 9888888999999999999999 99998888899999999999
Q ss_pred EeecCccCccCCCCcCCCCCcc---EEEccCC-CccCCCCccCCCCCCCc-EEECcCCcCcCCCCccCcCCCCCcEEEcc
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLR---SVDLSQN-KLVGPIPSSLGHLTQLT-TLNMYNNKLDGPIPPELMNCSKLRILKLG 157 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~---~L~l~~n-~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 157 (560)
++++|++++ +|. |..+++|+ .|++++| .++++.+..|.++++|+ .|++++|+++.+.+..+.. ++|+.|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 999999996 665 88888888 9999999 99988888899999999 9999999999554445555 899999999
Q ss_pred Ccc-cccccchhhccc-cccceeeccccccCCcCccccCCCceeeEEEccCCc
Q 035761 158 NNL-LSGSIPSQIGKL-QELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNN 208 (560)
Q Consensus 158 ~n~-l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~ 208 (560)
+|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++.
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC-
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCcc
Confidence 995 997778889999 9999999999999954443 67788899988763
No 313
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=2.8e-26 Score=245.74 Aligned_cols=229 Identities=18% Similarity=0.190 Sum_probs=186.2
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCcc-c-------------------cCCCCCCeeeccc
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSN-V-------------------GHLTQLTTLAIAS 62 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~-~-------------------~~l~~L~~L~L~~ 62 (560)
.+++|++|++++|.++ .+|..+..+ +|++|++++|.+. .+|.. + ..+++|+.|++++
T Consensus 280 ~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~ 356 (570)
T 2z63_A 280 CLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSR 356 (570)
T ss_dssp GGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCS
T ss_pred CcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCccccccccccCCCCCEEeCcC
Confidence 4567778888877777 456666666 6666666666665 22221 1 5678888888888
Q ss_pred ccccccc--ccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCC-ccCCCCCCCcEEECcCCcCcC
Q 035761 63 NRMNGSI--LLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIP-SSLGHLTQLTTLNMYNNKLDG 139 (560)
Q Consensus 63 n~i~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~ 139 (560)
|+++... +..+.++++|++|++++|.+++..+. +..+++|+.|++++|.+++..+ ..+.++++|++|++++|.+.+
T Consensus 357 n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 435 (570)
T 2z63_A 357 NGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435 (570)
T ss_dssp SCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEE
T ss_pred CccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccc
Confidence 8887554 67788889999999999998865444 8899999999999999987655 578899999999999999998
Q ss_pred CCCccCcCCCCCcEEEccCcccc-cccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc-
Q 035761 140 PIPPELMNCSKLRILKLGNNLLS-GSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV- 217 (560)
Q Consensus 140 ~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~- 217 (560)
..|..+..+++|+.|++++|.++ +.+|..+..+++|++|++++|++++..|..+..+++|+.|++++|++++.++..+
T Consensus 436 ~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 515 (570)
T 2z63_A 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFD 515 (570)
T ss_dssp CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhh
Confidence 88889999999999999999997 5688889999999999999999998889999999999999999999998877644
Q ss_pred --ccCCCCcCCCCCCCCcCC
Q 035761 218 --RKVPHLDVSGNQFGGEIP 235 (560)
Q Consensus 218 --~~l~~l~l~~n~~~~~~p 235 (560)
.+++.|++++|++.|.++
T Consensus 516 ~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 516 RLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TCTTCCEEECCSSCBCCCTT
T ss_pred cccCCcEEEecCCcccCCCc
Confidence 567788999999987643
No 314
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=8.6e-26 Score=226.27 Aligned_cols=220 Identities=27% Similarity=0.363 Sum_probs=151.3
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|.++++|++|++++|.+++..+ +..+++|++|++++|..... +..+..+++|+.|++++|.+....+ +..+++|+
T Consensus 106 ~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~ 180 (347)
T 4fmz_A 106 LQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLY 180 (347)
T ss_dssp GTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCS
T ss_pred HcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcCCchh--hccCCCCC
Confidence 4578899999999999885433 88888888888888865533 3447888888888888888875444 77788888
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcc
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNL 160 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 160 (560)
+|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.
T Consensus 181 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~ 254 (347)
T 4fmz_A 181 SLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQ 254 (347)
T ss_dssp EEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCc
Confidence 88888888874332 6667777777777777764332 6667777777777777764422 6666777777777777
Q ss_pred cccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcc---cccCCCCcCCCCCCCCcCC
Q 035761 161 LSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVF---VRKVPHLDVSGNQFGGEIP 235 (560)
Q Consensus 161 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~---~~~l~~l~l~~n~~~~~~p 235 (560)
+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..+.. +++++.|++++|++.+..|
T Consensus 255 l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 255 ISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred cCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 7643 3466677777777777776643 34566667777777777776655543 3455666777777665533
No 315
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.93 E-value=2.6e-25 Score=211.89 Aligned_cols=177 Identities=21% Similarity=0.252 Sum_probs=96.9
Q ss_pred CCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeec
Q 035761 7 LVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSR 86 (560)
Q Consensus 7 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 86 (560)
.++++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 455666666665 3444333 4566666666666655555566666666666666666555555555555555555555
Q ss_pred CccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccc
Q 035761 87 NEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIP 166 (560)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 166 (560)
|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 55555444555555555555555555554444445555555555555555554444445555555555555555554444
Q ss_pred hhhccccccceeeccccccC
Q 035761 167 SQIGKLQELYYLDLSGNFIN 186 (560)
Q Consensus 167 ~~~~~l~~L~~L~l~~n~l~ 186 (560)
..|..+++|+.|+|++|++.
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBC
T ss_pred HHHhCCCCCCEEEeeCCcee
Confidence 44444555555555555444
No 316
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.93 E-value=3.2e-26 Score=244.08 Aligned_cols=183 Identities=19% Similarity=0.143 Sum_probs=160.9
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|+|++|+++++.|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 58999999999999988999999999999999999999999999999999999999999999888888999999999999
Q ss_pred ecCccCcc-CCCCcCCCCCccEEEccCCC-ccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 85 SRNEIGGS-IPSTLGHLKWLRSVDLSQNK-LVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 85 ~~n~l~~~-~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
++|.+++. .|..+.++++|++|++++|. +....+..|.++++|++|++++|.+++..|..+..+++|+.|++++|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 99999963 46789999999999999998 55445578999999999999999999888999988888888888888876
Q ss_pred cccchhhccccccceeeccccccCC
Q 035761 163 GSIPSQIGKLQELYYLDLSGNFING 187 (560)
Q Consensus 163 ~~~~~~~~~l~~L~~L~l~~n~l~~ 187 (560)
......+..+++|++|++++|++++
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ccchhhHhhcccccEEEccCCcccc
Confidence 3333333567778888888877765
No 317
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=241.14 Aligned_cols=165 Identities=23% Similarity=0.255 Sum_probs=143.5
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
+++++|+|++|.++++.+..|.++++|++|+|++|+++++.|..|.++++|++|+|++|+++...+..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999888889999999999999999999888889999999999999999999888889999999999999
Q ss_pred ecCccCccCCCCcCCCCCccEEEccCCCccCC-CCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCC----cEEEccCc
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGP-IPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKL----RILKLGNN 159 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L----~~L~l~~n 159 (560)
++|++++..+..++++++|++|++++|.+++. +|..|.++++|++|++++|.+++..+..+..+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 99999976666799999999999999999863 68889999999999999999987777777777777 77888888
Q ss_pred ccccccchhh
Q 035761 160 LLSGSIPSQI 169 (560)
Q Consensus 160 ~l~~~~~~~~ 169 (560)
.+++..|..|
T Consensus 188 ~l~~~~~~~~ 197 (570)
T 2z63_A 188 PMNFIQPGAF 197 (570)
T ss_dssp CCCEECTTTT
T ss_pred CceecCHHHh
Confidence 7765554444
No 318
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.93 E-value=5.3e-25 Score=209.78 Aligned_cols=182 Identities=23% Similarity=0.232 Sum_probs=169.1
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEc
Q 035761 29 SELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDL 108 (560)
Q Consensus 29 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 108 (560)
.+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 46789999999999 6666665 68999999999999988999999999999999999999888888999999999999
Q ss_pred cCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCc
Q 035761 109 SQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGK 188 (560)
Q Consensus 109 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 188 (560)
++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999988888999999999999999999988777889999999999999999988777899999999999999999988
Q ss_pred CccccCCCceeeEEEccCCcccccc
Q 035761 189 IPSQLGEFSCIDTVDLSMNNLSGGI 213 (560)
Q Consensus 189 ~~~~~~~~~~L~~l~l~~n~l~~~~ 213 (560)
.+..+..+++|+.|++++|++++..
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCc
Confidence 8889999999999999999999873
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=2.4e-26 Score=240.16 Aligned_cols=205 Identities=22% Similarity=0.196 Sum_probs=179.5
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|+++++|++|+|++|.+++..| |..+++|++|+|++|.|+++.+ .++|+.|+|++|.+++..+. .+++|+
T Consensus 54 ~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~---~l~~L~ 123 (487)
T 3oja_A 54 LAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQGKK 123 (487)
T ss_dssp GTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEEC---CCSSCE
T ss_pred HhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCcc---ccCCCC
Confidence 4678999999999999997766 9999999999999999996543 38999999999999977665 458899
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCC-CCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCc
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLG-HLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 159 (560)
+|+|++|.+++..|..+..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+++. ..+..+++|+.|+|++|
T Consensus 124 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~--~~~~~l~~L~~L~Ls~N 201 (487)
T 3oja_A 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSN 201 (487)
T ss_dssp EEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSS
T ss_pred EEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc--cccccCCCCCEEECCCC
Confidence 999999999998888999999999999999999988888876 799999999999999976 33456899999999999
Q ss_pred ccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccc-cccCccccc
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLS-GGIPVFVRK 219 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~-~~~~~~~~~ 219 (560)
.+++..| .+..+++|+.|+|++|++++ +|..+..+++|+.|++++|++. +.+|.++..
T Consensus 202 ~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 202 KLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp CCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred CCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 9996544 59999999999999999995 7778999999999999999998 444544443
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.2e-26 Score=227.30 Aligned_cols=212 Identities=21% Similarity=0.189 Sum_probs=181.3
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|+++++|++|+|++|.+++..+ |..+++|++|+|++|+++++. ..++|++|++++|++++..+.. +++|+
T Consensus 54 ~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~ 123 (317)
T 3o53_A 54 LAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKK 123 (317)
T ss_dssp HTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCE
T ss_pred hhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCC
Confidence 3678999999999999997655 999999999999999998543 3389999999999999766554 67899
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccC-CCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCc
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSL-GHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 159 (560)
+|++++|++++..+..+..+++|++|+|++|.+++..+..+ ..+++|++|+|++|.+++. .....+++|+.|++++|
T Consensus 124 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N 201 (317)
T 3o53_A 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSN 201 (317)
T ss_dssp EEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSS
T ss_pred EEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc--ccccccccCCEEECCCC
Confidence 99999999998888899999999999999999997777766 4789999999999999965 33445899999999999
Q ss_pred ccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccc-cccCcccc---cCCCCcCC
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLS-GGIPVFVR---KVPHLDVS 226 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~-~~~~~~~~---~l~~l~l~ 226 (560)
++++. |..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|+++ +.+|.++. +++.+++.
T Consensus 202 ~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 202 KLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred cCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 99954 555999999999999999999 57888999999999999999999 55555443 34445555
No 321
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.93 E-value=4.1e-25 Score=230.35 Aligned_cols=217 Identities=28% Similarity=0.390 Sum_probs=178.6
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
++++++|++|++++|.+++. ..+..+++|++|++++|.+++..| +..+++|+.|++++|+++.. ..+..+++|+
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 246 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLT 246 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCS
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCC
Confidence 35678889999999988754 347888899999999998886544 77788999999999988754 4577889999
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcc
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNL 160 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 160 (560)
+|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|+
T Consensus 247 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~ 320 (466)
T 1o6v_A 247 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 320 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSC
T ss_pred EEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCc
Confidence 99999999986544 8888999999999999985543 7888999999999999986543 7888999999999999
Q ss_pred cccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc-ccccCCCCcCCCCCCCCc
Q 035761 161 LSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV-FVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 161 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~-~~~~l~~l~l~~n~~~~~ 233 (560)
+++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|. .+++++.|++++|++.+.
T Consensus 321 l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 321 ISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEECC
T ss_pred CCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccCC
Confidence 987655 78899999999999999865 4688899999999999999887773 446778889999998875
No 322
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=9.1e-25 Score=226.18 Aligned_cols=211 Identities=21% Similarity=0.196 Sum_probs=178.9
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCE
Q 035761 2 GRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQV 81 (560)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 81 (560)
+++++|++|++++|.+++. | .|..+++|++|+|++|+++++ | +..+++|++|+|++|++++. + +.++++|++
T Consensus 39 ~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~ 110 (457)
T 3bz5_A 39 EQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTY 110 (457)
T ss_dssp HHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCE
T ss_pred hHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCE
Confidence 3578999999999999965 4 689999999999999999964 4 88999999999999999865 2 889999999
Q ss_pred EEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccc
Q 035761 82 LDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLL 161 (560)
Q Consensus 82 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 161 (560)
|++++|++++. + +..+++|++|++++|++++. + +..+++|++|++++|...+.+ .+..+++|+.|++++|++
T Consensus 111 L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 111 LNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp EECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcc
Confidence 99999999964 3 88999999999999999964 3 788999999999999555444 578889999999999999
Q ss_pred ccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccCCCCcCCCCCCCCcC
Q 035761 162 SGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVPHLDVSGNQFGGEI 234 (560)
Q Consensus 162 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~l~~n~~~~~~ 234 (560)
++ +| +..+++|+.|++++|++++. .+..+++|+.|++++|++++.....+++++.|++++|++.+.+
T Consensus 183 ~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 183 TE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp CC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCCC
T ss_pred ce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccCccccCCCCEEEeeCCcCCCcC
Confidence 86 44 78889999999999999865 3788899999999999999854345677888899999988753
No 323
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=5.4e-25 Score=220.44 Aligned_cols=226 Identities=23% Similarity=0.374 Sum_probs=188.1
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|.++++|++|++++|.+++. +.|..+++|++|++++|.+++..+ +..+++|+.|++++|..... ...+..+++|+
T Consensus 84 ~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~ 158 (347)
T 4fmz_A 84 LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-LSPLSNMTGLN 158 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCC
T ss_pred hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccc-ccchhhCCCCc
Confidence 46789999999999999854 469999999999999999985533 88999999999999966533 34489999999
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcc
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNL 160 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 160 (560)
+|++++|.++...+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNK 232 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCc
Confidence 99999999985443 8899999999999999985433 8889999999999999986543 8899999999999999
Q ss_pred cccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccC-cccccCCCCcCCCCCCCCcCCcccC
Q 035761 161 LSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIP-VFVRKVPHLDVSGNQFGGEIPTTLA 239 (560)
Q Consensus 161 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~-~~~~~l~~l~l~~n~~~~~~p~~~~ 239 (560)
+++..+ +..+++|++|++++|.+++. +.+..+++|+.|++++|.+++... ..+++++.|++++|++.+..+....
T Consensus 233 l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 233 ITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred cCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 986544 88999999999999999864 468899999999999999987532 2457888999999999876655444
Q ss_pred CC
Q 035761 240 NV 241 (560)
Q Consensus 240 ~~ 241 (560)
..
T Consensus 309 ~l 310 (347)
T 4fmz_A 309 GL 310 (347)
T ss_dssp TC
T ss_pred cc
Confidence 33
No 324
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=6.4e-26 Score=223.29 Aligned_cols=223 Identities=20% Similarity=0.186 Sum_probs=181.3
Q ss_pred CCCEEEccCCcCcccCC---CCCCCcCCCCEEEccCCcceecCCccc--cCCCCCCeeeccccccccccc----cccCCC
Q 035761 6 NLVHLDLSDNHFMGHIP---PTLGRLSELKILNLSLNSLVGNIPSNV--GHLTQLTTLAIASNRMNGSIL----LGIGSL 76 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~N~i~~~~~~~~--~~l~~L~~L~L~~n~i~~~~~----~~~~~l 76 (560)
.++.|.+.++.++...- ..+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 47888888888763210 012245679999999999998888888 899999999999999986433 455678
Q ss_pred CCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCC----CCccCCCCCCCcEEECcCCcCcCCCCc----cCcCC
Q 035761 77 KVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGP----IPSSLGHLTQLTTLNMYNNKLDGPIPP----ELMNC 148 (560)
Q Consensus 77 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~----~~~~l 148 (560)
++|++|+|++|++++..+..|..+++|++|+|++|++.+. .+..+..+++|++|+|++|+++. ++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999988888999999999999999997642 23345788999999999999973 333 25788
Q ss_pred CCCcEEEccCcccccccchhhccc---cccceeeccccccCCcCccccCCCceeeEEEccCCcccc-ccCcccccCCCCc
Q 035761 149 SKLRILKLGNNLLSGSIPSQIGKL---QELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSG-GIPVFVRKVPHLD 224 (560)
Q Consensus 149 ~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~-~~~~~~~~l~~l~ 224 (560)
++|+.|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|++++|++++ ..+..+++++.|+
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~ 300 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDELPEVDNLT 300 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSCCCCSCEE
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhCCCccEEE
Confidence 999999999999998878777776 69999999999999 5676664 799999999999997 4556778899999
Q ss_pred CCCCCCCC
Q 035761 225 VSGNQFGG 232 (560)
Q Consensus 225 l~~n~~~~ 232 (560)
+++|++..
T Consensus 301 L~~N~l~~ 308 (310)
T 4glp_A 301 LDGNPFLV 308 (310)
T ss_dssp CSSTTTSC
T ss_pred CcCCCCCC
Confidence 99999874
No 325
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.92 E-value=3.1e-25 Score=217.93 Aligned_cols=196 Identities=27% Similarity=0.344 Sum_probs=164.7
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEE
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
++++|++|++++|.++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++. ..+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 36789999999999985 34 58889999999999999986544 89999999999999999854 368889999999
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
+|++|++++. + .+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.++
T Consensus 113 ~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 9999999854 3 38899999999999999985533 8889999999999999986433 888999999999999998
Q ss_pred cccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccC
Q 035761 163 GSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIP 214 (560)
Q Consensus 163 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~ 214 (560)
+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++...
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCCE
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCCe
Confidence 6543 8899999999999999986553 7889999999999999986443
No 326
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=1.3e-24 Score=226.43 Aligned_cols=218 Identities=28% Similarity=0.381 Sum_probs=140.0
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCE
Q 035761 2 GRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQV 81 (560)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 81 (560)
..+++|++|+|++|.+++..+ +.++++|++|++++|.+++..+ +.++++|++|+|++|++++..+ +.++++|++
T Consensus 65 ~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 138 (466)
T 1o6v_A 65 EYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNR 138 (466)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred hhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCE
Confidence 456778888888888875544 7788888888888888875544 7778888888888887775433 677777777
Q ss_pred EEeecCccCccCC-------------------CCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCC
Q 035761 82 LDLSRNEIGGSIP-------------------STLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIP 142 (560)
Q Consensus 82 L~l~~n~l~~~~~-------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 142 (560)
|++++|.+++... ..+.++++|+.|++++|.+++. ..+..+++|++|++++|.+++..+
T Consensus 139 L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 216 (466)
T 1o6v_A 139 LELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 216 (466)
T ss_dssp EEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred EECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc
Confidence 7777777664210 1255667777777777777643 346677777777777777765433
Q ss_pred ccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc-ccccCC
Q 035761 143 PELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV-FVRKVP 221 (560)
Q Consensus 143 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~-~~~~l~ 221 (560)
+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.+++..+. .+.+++
T Consensus 217 --~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~ 290 (466)
T 1o6v_A 217 --LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALT 290 (466)
T ss_dssp --GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCS
T ss_pred --ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccC
Confidence 55566666666666666532 245566666666666666654433 55556666666666665544331 234455
Q ss_pred CCcCCCCCCCCc
Q 035761 222 HLDVSGNQFGGE 233 (560)
Q Consensus 222 ~l~l~~n~~~~~ 233 (560)
.|++++|++.+.
T Consensus 291 ~L~L~~n~l~~~ 302 (466)
T 1o6v_A 291 NLELNENQLEDI 302 (466)
T ss_dssp EEECCSSCCSCC
T ss_pred eEEcCCCcccCc
Confidence 555555555543
No 327
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.92 E-value=3.4e-24 Score=221.91 Aligned_cols=207 Identities=23% Similarity=0.246 Sum_probs=176.9
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|+.+++|++|+|++|+++++ | +..+++|++|+|++|++++. + +.++++|++|+|++|++++. + +..+++|+
T Consensus 60 l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~ 130 (457)
T 3bz5_A 60 IEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLT 130 (457)
T ss_dssp GGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCC
T ss_pred hcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCC
Confidence 35688999999999999975 3 89999999999999999965 3 89999999999999999864 3 88999999
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcc
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNL 160 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 160 (560)
+|++++|++++. .+..+++|++|++++|...+.+ .+..+++|+.|++++|++++. | +..+++|+.|++++|.
T Consensus 131 ~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 131 YLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNN 202 (457)
T ss_dssp EEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSC
T ss_pred EEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCc
Confidence 999999999964 3889999999999999655454 488899999999999999964 4 8889999999999999
Q ss_pred cccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccCCCCcCCCCCC
Q 035761 161 LSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVPHLDVSGNQF 230 (560)
Q Consensus 161 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~l~~n~~ 230 (560)
+++. .+..+++|++|++++|++++ +| +..+++|+.|++++|++++..+..+++++.|++.+|.+
T Consensus 203 l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L 266 (457)
T 3bz5_A 203 ITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDL 266 (457)
T ss_dssp CSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCC
T ss_pred CCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCC
Confidence 9965 38899999999999999997 45 88899999999999999987776666665544444443
No 328
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=1.5e-25 Score=220.74 Aligned_cols=201 Identities=23% Similarity=0.237 Sum_probs=127.4
Q ss_pred CCCCEEEccCCcCcccCCCCC--CCcCCCCEEEccCCcceecCC----ccccCCCCCCeeeccccccccccccccCCCCC
Q 035761 5 RNLVHLDLSDNHFMGHIPPTL--GRLSELKILNLSLNSLVGNIP----SNVGHLTQLTTLAIASNRMNGSILLGIGSLKV 78 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 78 (560)
++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..+..|.++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 456777777777776666666 667777777777777665333 23345667777777777776666666777777
Q ss_pred CCEEEeecCccCc---cC-CCCcCCCCCccEEEccCCCccCCCCc----cCCCCCCCcEEECcCCcCcCCCCccCcCC--
Q 035761 79 LQVLDLSRNEIGG---SI-PSTLGHLKWLRSVDLSQNKLVGPIPS----SLGHLTQLTTLNMYNNKLDGPIPPELMNC-- 148 (560)
Q Consensus 79 L~~L~l~~n~l~~---~~-~~~~~~l~~L~~L~l~~n~l~~~~~~----~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-- 148 (560)
|++|+|++|++.+ .. +..+..+++|++|+|++|+++ .++. .+.++++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 7777777776653 11 223356667777777777765 2222 24556677777777777776656555555
Q ss_pred -CCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCcccc
Q 035761 149 -SKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSG 211 (560)
Q Consensus 149 -~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~ 211 (560)
++|+.|++++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|++++|+++.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 47777777777776 4455443 5677777777777643 22 4566677777777777653
No 329
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=3.5e-24 Score=210.38 Aligned_cols=208 Identities=21% Similarity=0.309 Sum_probs=177.9
Q ss_pred EEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCcc
Q 035761 10 LDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEI 89 (560)
Q Consensus 10 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l 89 (560)
+.+..+.+++.. .+..+++|++|++++|.++. +| .+..+++|+.|+|++|+++...+ +.++++|++|+|++|.+
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcC
Confidence 345566666433 35678999999999999985 44 68999999999999999996655 99999999999999999
Q ss_pred CccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhh
Q 035761 90 GGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQI 169 (560)
Q Consensus 90 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 169 (560)
++. ..+..+++|+.|+|++|++++. + .+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +
T Consensus 98 ~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l 169 (308)
T 1h6u_A 98 KNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--L 169 (308)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G
T ss_pred CCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--h
Confidence 953 3689999999999999999964 3 38999999999999999996533 8999999999999999996544 8
Q ss_pred ccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc-ccccCCCCcCCCCCCCCc
Q 035761 170 GKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV-FVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 170 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~-~~~~l~~l~l~~n~~~~~ 233 (560)
..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+. .+++++.|++++|++.+.
T Consensus 170 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 170 ANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEECC
T ss_pred cCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeecC
Confidence 999999999999999996554 88999999999999999977653 456788899999999764
No 330
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.91 E-value=3e-24 Score=207.44 Aligned_cols=155 Identities=16% Similarity=0.191 Sum_probs=122.5
Q ss_pred HHHHHHhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhh----------------hhHHHHHHHHHHHhccC
Q 035761 308 QDMIEATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETEL----------------ASLESFQNEARLLSQIR 371 (560)
Q Consensus 308 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~e~~~l~~l~ 371 (560)
..+......|++.+.||+|+||.||+|...+|+.||+|.++...... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 34444456677789999999999999998779999999986433211 13456889999999999
Q ss_pred CCCcceeeeEEEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeE
Q 035761 372 HRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNIL 451 (560)
Q Consensus 372 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 451 (560)
| +++.+++.. +..++||||+++|+|.+ +.. .+...++.|++.||+|||+. ||+||||||+|||
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 5 677776544 44699999999999988 432 12347999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCCceeeccccCccCcccccc
Q 035761 452 LNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYT 493 (560)
Q Consensus 452 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~ 493 (560)
++ ++.+||+|||+|+.. ..++|||++.+
T Consensus 226 l~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~r 253 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVEV-------------GEEGWREILER 253 (282)
T ss_dssp EE-TTEEEECCCTTCEET-------------TSTTHHHHHHH
T ss_pred EE-CCcEEEEECCCCeEC-------------CCCCHHHHHHH
Confidence 99 999999999999743 34788887653
No 331
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.91 E-value=2.4e-23 Score=192.32 Aligned_cols=180 Identities=22% Similarity=0.241 Sum_probs=144.6
Q ss_pred CEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecC
Q 035761 8 VHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRN 87 (560)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 87 (560)
+.++++++.++. +|..+ .++|++|+|++|+++++.+..|.++++|++|+|++|+++...+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 578888888874 45443 358889999999888777777888888999999998888777777888888888888888
Q ss_pred ccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccch
Q 035761 88 EIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPS 167 (560)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (560)
++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 8887666678888888888888888887777778888888888888888887666668888888888888887763
Q ss_pred hhccccccceeeccccccCCcCccccCCCc
Q 035761 168 QIGKLQELYYLDLSGNFINGKIPSQLGEFS 197 (560)
Q Consensus 168 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 197 (560)
.+++|+.|+++.|++++.+|..++.++
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 345788888888888888887776554
No 332
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=2e-26 Score=234.36 Aligned_cols=231 Identities=20% Similarity=0.293 Sum_probs=189.9
Q ss_pred CCCCCCEEEccCCcCccc----CCCCCCCcCCCCEEEccCCc---ceecCCccc-------cCCCCCCeeecccccccc-
Q 035761 3 RLRNLVHLDLSDNHFMGH----IPPTLGRLSELKILNLSLNS---LVGNIPSNV-------GHLTQLTTLAIASNRMNG- 67 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~---i~~~~~~~~-------~~l~~L~~L~L~~n~i~~- 67 (560)
.+++|++|+|++|.++.. ++..|..+++|++|+|++|. +++..|..+ ..+++|++|+|++|+++.
T Consensus 30 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 109 (386)
T 2ca6_A 30 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 109 (386)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTT
T ss_pred cCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHH
Confidence 468899999999999865 34558899999999999964 444455554 789999999999999987
Q ss_pred ---ccccccCCCCCCCEEEeecCccCccCCCC----cCCC---------CCccEEEccCCCcc-CCCC---ccCCCCCCC
Q 035761 68 ---SILLGIGSLKVLQVLDLSRNEIGGSIPST----LGHL---------KWLRSVDLSQNKLV-GPIP---SSLGHLTQL 127 (560)
Q Consensus 68 ---~~~~~~~~l~~L~~L~l~~n~l~~~~~~~----~~~l---------~~L~~L~l~~n~l~-~~~~---~~~~~l~~L 127 (560)
.++..+..+++|++|+|++|.++...+.. +..+ ++|++|+|++|+++ ...+ ..+..+++|
T Consensus 110 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 189 (386)
T 2ca6_A 110 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 189 (386)
T ss_dssp THHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCc
Confidence 46778889999999999999997543333 3334 89999999999997 3344 467788999
Q ss_pred cEEECcCCcCcC-----CCCccCcCCCCCcEEEccCcccc----cccchhhccccccceeeccccccCCc----Ccccc-
Q 035761 128 TTLNMYNNKLDG-----PIPPELMNCSKLRILKLGNNLLS----GSIPSQIGKLQELYYLDLSGNFINGK----IPSQL- 193 (560)
Q Consensus 128 ~~L~l~~n~l~~-----~~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~- 193 (560)
++|+|++|+++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|++|+|++|++++. ++..+
T Consensus 190 ~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 269 (386)
T 2ca6_A 190 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFS 269 (386)
T ss_dssp CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHH
T ss_pred CEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHh
Confidence 999999999982 33447889999999999999996 56788899999999999999999866 45666
Q ss_pred -CCCceeeEEEccCCcccc----ccCcc----cccCCCCcCCCCCCCCc
Q 035761 194 -GEFSCIDTVDLSMNNLSG----GIPVF----VRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 194 -~~~~~L~~l~l~~n~l~~----~~~~~----~~~l~~l~l~~n~~~~~ 233 (560)
..+++|+.|+|++|.+++ .+|.. +++++.|++++|++.+.
T Consensus 270 ~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 270 KLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp TCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred hccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 348999999999999998 46653 47889999999998764
No 333
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=2.9e-25 Score=221.41 Aligned_cols=233 Identities=17% Similarity=0.253 Sum_probs=194.3
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceec-CCccccCCCCCCeeeccccccccccccccCCCCCCCEEE
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGN-IPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLD 83 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 83 (560)
++++.|++++|.+++..+. +..+++|++|+|++|.+++. .+..+..+++|++|+|++|+++...+..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 6899999999999977665 55799999999999999865 788899999999999999999988888999999999999
Q ss_pred eecC-ccCcc-CCCCcCCCCCccEEEccCC-CccCC-CCccCCCCC-CCcEEECcCCc--Cc-CCCCccCcCCCCCcEEE
Q 035761 84 LSRN-EIGGS-IPSTLGHLKWLRSVDLSQN-KLVGP-IPSSLGHLT-QLTTLNMYNNK--LD-GPIPPELMNCSKLRILK 155 (560)
Q Consensus 84 l~~n-~l~~~-~~~~~~~l~~L~~L~l~~n-~l~~~-~~~~~~~l~-~L~~L~l~~n~--l~-~~~~~~~~~l~~L~~L~ 155 (560)
|++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|++|++++|. ++ +.++..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 67752 5666788999999999999 88753 466788899 99999999994 54 34566778899999999
Q ss_pred ccCcc-cccccchhhccccccceeeccccc-cCCcCccccCCCceeeEEEccCCccccccCccc-ccCCCCcCCCCCCCC
Q 035761 156 LGNNL-LSGSIPSQIGKLQELYYLDLSGNF-INGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV-RKVPHLDVSGNQFGG 232 (560)
Q Consensus 156 l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~-~~l~~l~l~~n~~~~ 232 (560)
+++|. +++..+..+..+++|++|++++|. +.......+..+++|+.|++++| ++......+ ..++.|++.+|++.+
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~~~l~~L~l~~n~l~~ 307 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQINCSHFTT 307 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSEESCCCSCC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHHHHHHHHhhCcceEEecccCcc
Confidence 99999 777788899999999999999995 33222336788999999999999 554333334 469999999999998
Q ss_pred cCCcccC
Q 035761 233 EIPTTLA 239 (560)
Q Consensus 233 ~~p~~~~ 239 (560)
..|+...
T Consensus 308 ~~~~~~~ 314 (336)
T 2ast_B 308 IARPTIG 314 (336)
T ss_dssp TTCSSCS
T ss_pred ccCCccc
Confidence 7666543
No 334
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=9.8e-23 Score=188.21 Aligned_cols=182 Identities=21% Similarity=0.183 Sum_probs=158.7
Q ss_pred CCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccC
Q 035761 31 LKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQ 110 (560)
Q Consensus 31 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 110 (560)
-+.++.+++.++ .+|..+ .++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 367889999888 455444 36899999999999988888899999999999999999977777889999999999999
Q ss_pred CCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCc
Q 035761 111 NKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIP 190 (560)
Q Consensus 111 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 190 (560)
|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+++..+..|..+++|++|++++|++.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~--- 162 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC--- 162 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC---
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec---
Confidence 99997777778999999999999999998777778999999999999999997777778999999999999998874
Q ss_pred cccCCCceeeEEEccCCccccccCcccccCCC
Q 035761 191 SQLGEFSCIDTVDLSMNNLSGGIPVFVRKVPH 222 (560)
Q Consensus 191 ~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~~ 222 (560)
.+++|+.|+++.|.+++.+|..+..++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4567889999999999999987776654
No 335
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.89 E-value=1.1e-22 Score=220.65 Aligned_cols=227 Identities=20% Similarity=0.224 Sum_probs=139.9
Q ss_pred CCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcce--ecCCccccCCCCCCeeeccccccccccccccCCCCCCCE
Q 035761 4 LRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLV--GNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQV 81 (560)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 81 (560)
++.|+.+++++|.+... ..+..+++|+.|++++|.+. +..+..+..+.+|+.|++..|.+. ..+..+..+++|+.
T Consensus 348 l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~ 424 (635)
T 4g8a_A 348 LKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEH 424 (635)
T ss_dssp CTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCE
T ss_pred chhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccc
Confidence 45667777777766533 23445677777777777664 234455556666666666666665 33445566666666
Q ss_pred EEeecCccCccCC-CCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcC-cCCCCccCcCCCCCcEEEccCc
Q 035761 82 LDLSRNEIGGSIP-STLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKL-DGPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 82 L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l-~~~~~~~~~~l~~L~~L~l~~n 159 (560)
++++.|+.....+ ..|..+++++.++++.|.+.+..+..+..+++|+.|+|++|.+ .+..|..|..+++|+.|+|++|
T Consensus 425 l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N 504 (635)
T 4g8a_A 425 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 504 (635)
T ss_dssp EECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred hhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCC
Confidence 6666665553332 3455666666666666666666666666666666666666653 2345556666666666666666
Q ss_pred ccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCccc----ccCCCCcCCCCCCCCc
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV----RKVPHLDVSGNQFGGE 233 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~----~~l~~l~l~~n~~~~~ 233 (560)
++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|++++|+|++..|..+ .+++.|++++|++.|.
T Consensus 505 ~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 505 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred ccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 6666666666666666666666666666666666666666666666666666666543 3455566666666664
No 336
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=1.4e-22 Score=202.86 Aligned_cols=218 Identities=16% Similarity=0.036 Sum_probs=177.0
Q ss_pred CEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccc-cccccCCCCCCCE-EEee
Q 035761 8 VHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGS-ILLGIGSLKVLQV-LDLS 85 (560)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~-L~l~ 85 (560)
++++.++++++ .+|..+. +++++|+|++|+|+.+.+++|.++++|++|+|++|++.+. .+..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 67889999998 5666553 6899999999999977778899999999999999998654 4567889988775 6677
Q ss_pred cCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcC-CcCcCCCCccCcCCC-CCcEEEccCccccc
Q 035761 86 RNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYN-NKLDGPIPPELMNCS-KLRILKLGNNLLSG 163 (560)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~ 163 (560)
+|+|+.+.|+.|..+++|++|++++|+++...+..+....++..|++.+ |.+..+.+..|..+. .++.|++++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 7999988888999999999999999999977777777788888998865 577766666777765 68899999999985
Q ss_pred ccchhhccccccceeeccc-cccCCcCccccCCCceeeEEEccCCccccccCcccccCCCCcCCCCC
Q 035761 164 SIPSQIGKLQELYYLDLSG-NFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVPHLDVSGNQ 229 (560)
Q Consensus 164 ~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~l~~n~ 229 (560)
+.+. .....+|+.|++++ |.++...++.|..+++|+.|++++|+|+..++..+.+++.|.+.++.
T Consensus 169 i~~~-~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 169 IHNS-AFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 234 (350)
T ss_dssp ECTT-SSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT
T ss_pred CChh-hccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC
Confidence 4444 44567899999975 66775556678999999999999999998777778888888766554
No 337
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=8.6e-23 Score=204.38 Aligned_cols=219 Identities=16% Similarity=0.080 Sum_probs=174.5
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCccee-cCCccccCCCCCCe-eeccccccccccccccCCCCCCCEE
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVG-NIPSNVGHLTQLTT-LAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~-L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+ +.+.+|.++++|+. +.++.|+++.+.+..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 579999999999998878899999999999999999865 44567899999876 6677899998889999999999999
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccC-CCccCCCCccCCCCC-CCcEEECcCCcCcCCCCccCcCCCCCcEEEccC-c
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQ-NKLVGPIPSSLGHLT-QLTTLNMYNNKLDGPIPPELMNCSKLRILKLGN-N 159 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n 159 (560)
++++|+|+...+..+....++..|++.+ |++..+.+..|..+. .++.|+|++|+|+.+.+ ......+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~-~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHN-SAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECT-TSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCCh-hhccccchhHHhhccCC
Confidence 9999999977777788888899999976 678867777788775 68999999999995544 444567899999975 7
Q ss_pred ccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc--ccccCCCCcCCC
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV--FVRKVPHLDVSG 227 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~--~~~~l~~l~l~~ 227 (560)
.++.+.+..|..+++|++|+|++|+|+...+..+.++.+|+.+++ +.++ .+|. .+.++..+++..
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLPTLEKLVALMEASLTY 255 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCCCTTTCCSCCEEECSC
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCCCchhCcChhhCcCCC
Confidence 788666678999999999999999999666655655555544433 3333 3442 345555556543
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=3.6e-25 Score=222.87 Aligned_cols=230 Identities=20% Similarity=0.228 Sum_probs=175.7
Q ss_pred CCCCCEEEccCCcCcccCC----CCCCCcC-CCCEEEccCCcceecCCccccCC-----CCCCeeeccccccccccccc-
Q 035761 4 LRNLVHLDLSDNHFMGHIP----PTLGRLS-ELKILNLSLNSLVGNIPSNVGHL-----TQLTTLAIASNRMNGSILLG- 72 (560)
Q Consensus 4 l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l-----~~L~~L~L~~n~i~~~~~~~- 72 (560)
.++|++|+|++|.+++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|+++...+..
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 4569999999999997766 7788888 89999999999987767777664 89999999999998766554
Q ss_pred ---cCCC-CCCCEEEeecCccCccCCCCc----CC-CCCccEEEccCCCccCCCC----ccCCCCC-CCcEEECcCCcCc
Q 035761 73 ---IGSL-KVLQVLDLSRNEIGGSIPSTL----GH-LKWLRSVDLSQNKLVGPIP----SSLGHLT-QLTTLNMYNNKLD 138 (560)
Q Consensus 73 ---~~~l-~~L~~L~l~~n~l~~~~~~~~----~~-l~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~l~~n~l~ 138 (560)
+..+ ++|++|+|++|+++...+..+ .. .++|++|+|++|.++...+ ..+..++ +|++|+|++|+++
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 4444 899999999999986655443 33 3689999999999985433 3344555 8999999999998
Q ss_pred CCCCcc----CcCC-CCCcEEEccCcccccc----cchhhccc-cccceeeccccccCCcCc----cccCCCceeeEEEc
Q 035761 139 GPIPPE----LMNC-SKLRILKLGNNLLSGS----IPSQIGKL-QELYYLDLSGNFINGKIP----SQLGEFSCIDTVDL 204 (560)
Q Consensus 139 ~~~~~~----~~~l-~~L~~L~l~~n~l~~~----~~~~~~~l-~~L~~L~l~~n~l~~~~~----~~~~~~~~L~~l~l 204 (560)
+..+.. +..+ ++|+.|+|++|.+++. ++..+..+ ++|++|+|++|++++..+ ..+..+++|+.|++
T Consensus 181 ~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L 260 (362)
T 3goz_A 181 SKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYL 260 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEE
T ss_pred hhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEe
Confidence 766544 3445 5999999999999863 44555554 589999999999987654 34567889999999
Q ss_pred cCCccccccCc----------ccccCCCCcCCCCCCCCc
Q 035761 205 SMNNLSGGIPV----------FVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 205 ~~n~l~~~~~~----------~~~~l~~l~l~~n~~~~~ 233 (560)
++|.+.+..+. .+.++..|++++|++.+.
T Consensus 261 ~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 261 DYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp EHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred ccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 99985543322 234567789999997653
No 339
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=1.7e-22 Score=212.72 Aligned_cols=187 Identities=25% Similarity=0.376 Sum_probs=159.0
Q ss_pred CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEee
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLS 85 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 85 (560)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999997 566553 88999999999999 566 457999999999999997 555 665 99999999
Q ss_pred cCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccccc
Q 035761 86 RNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSI 165 (560)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 165 (560)
+|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|.|++ +|. |. ++|+.|+|++|.|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999996 555 68999999999999996 555 57899999999999996 566 66 99999999999999 56
Q ss_pred chhhcccccc-------ceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccC
Q 035761 166 PSQIGKLQEL-------YYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKV 220 (560)
Q Consensus 166 ~~~~~~l~~L-------~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l 220 (560)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 66 654 77 99999999999 578777789999999999999999888766543
No 340
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.88 E-value=2e-22 Score=202.47 Aligned_cols=176 Identities=24% Similarity=0.205 Sum_probs=135.5
Q ss_pred CEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCcccc-CCCCCCeeeccccccccccccccCCCCCCCEEEeec
Q 035761 8 VHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVG-HLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSR 86 (560)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 86 (560)
+.+++++|+++ .+|..+. +.+++|+|++|+|+++.+..|. ++++|+.|+|++|+|+.+.+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57888888887 4555443 4578888888888877777777 888888888888888877777788888888888888
Q ss_pred CccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccC---cCCCCCcEEEccCccccc
Q 035761 87 NEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPEL---MNCSKLRILKLGNNLLSG 163 (560)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~ 163 (560)
|+|+...+..|.++++|+.|+|++|+|+++.+..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 88887777778888888888888888887777788888888888888888886544444 567888888888888886
Q ss_pred ccchhhcccccc--ceeeccccccC
Q 035761 164 SIPSQIGKLQEL--YYLDLSGNFIN 186 (560)
Q Consensus 164 ~~~~~~~~l~~L--~~L~l~~n~l~ 186 (560)
..+..|..++.+ +.|+|++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 666677777763 77788887775
No 341
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.88 E-value=2.2e-21 Score=200.63 Aligned_cols=140 Identities=28% Similarity=0.354 Sum_probs=93.6
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|++++|++++ +| .|.++++|++|++++|++++ +|..+ .+|++|++++|++++ .| .+.++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 578889999988886 55 58888888888888888884 45433 478888888888875 34 5777888888888
Q ss_pred ecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
++|++++ +|... ++|++|++++|.++ .+| .+..+++|++|++++|++++ +|.. +++|+.|++++|+++
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~ 270 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLT 270 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCS
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCccc
Confidence 8887774 33322 46666777777666 444 36666666666666666664 2221 134444444444444
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.2e-24 Score=221.22 Aligned_cols=214 Identities=22% Similarity=0.239 Sum_probs=177.2
Q ss_pred CCCCCCCCEEEccCCcC---cccCCCCC-------CCcCCCCEEEccCCccee----cCCccccCCCCCCeeeccccccc
Q 035761 1 MGRLRNLVHLDLSDNHF---MGHIPPTL-------GRLSELKILNLSLNSLVG----NIPSNVGHLTQLTTLAIASNRMN 66 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l---~~~~~~~~-------~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~n~i~ 66 (560)
|.++++|++|+|++|.+ ++.+|..+ ..+++|++|+|++|.++. .+|..+..+++|++|+|++|.++
T Consensus 56 l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 45789999999999754 44445444 788999999999999996 47778899999999999999997
Q ss_pred ccccccc----CCC---------CCCCEEEeecCccC-ccCC---CCcCCCCCccEEEccCCCccC-----CCCccCCCC
Q 035761 67 GSILLGI----GSL---------KVLQVLDLSRNEIG-GSIP---STLGHLKWLRSVDLSQNKLVG-----PIPSSLGHL 124 (560)
Q Consensus 67 ~~~~~~~----~~l---------~~L~~L~l~~n~l~-~~~~---~~~~~l~~L~~L~l~~n~l~~-----~~~~~~~~l 124 (560)
...+..+ ..+ ++|++|+|++|+++ ...+ ..+..+++|+.|+|++|+++. ..+..+..+
T Consensus 136 ~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 136 PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC 215 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC
Confidence 5444433 334 89999999999998 3333 466788999999999999972 344478899
Q ss_pred CCCcEEECcCCcCc----CCCCccCcCCCCCcEEEccCcccccc----cchhhcc--ccccceeeccccccCC----cCc
Q 035761 125 TQLTTLNMYNNKLD----GPIPPELMNCSKLRILKLGNNLLSGS----IPSQIGK--LQELYYLDLSGNFING----KIP 190 (560)
Q Consensus 125 ~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~--l~~L~~L~l~~n~l~~----~~~ 190 (560)
++|+.|+|++|.++ ..+|..+..+++|+.|+|++|.+++. ++..+.. +++|++|+|++|++++ .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 99999999999996 46777899999999999999999865 4566643 8999999999999997 477
Q ss_pred ccc-CCCceeeEEEccCCccccccC
Q 035761 191 SQL-GEFSCIDTVDLSMNNLSGGIP 214 (560)
Q Consensus 191 ~~~-~~~~~L~~l~l~~n~l~~~~~ 214 (560)
..+ .++++|+.|++++|++++..+
T Consensus 296 ~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHhcCCCceEEEccCCcCCcchh
Confidence 776 668999999999999998775
No 343
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.88 E-value=1.9e-21 Score=201.01 Aligned_cols=181 Identities=24% Similarity=0.346 Sum_probs=134.7
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
++|++|++++|+++++ +.. .++|++|++++|++++ +| .|.++++|++|++++|++++ .|.. ..+|++|++
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~---~~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL---PPSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC---cccccEEEC
Confidence 4566666666666642 221 1689999999999985 66 59999999999999999985 4433 358999999
Q ss_pred ecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccc
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGS 164 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 164 (560)
++|++++ +| .+.++++|+.|++++|.+++ +|... ++|++|++++|.++ .+| .+..+++|+.|++++|++++
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~- 251 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT- 251 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-
Confidence 9999996 55 58999999999999999985 44432 58999999999998 556 48899999999999999985
Q ss_pred cchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCcccc
Q 035761 165 IPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSG 211 (560)
Q Consensus 165 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~ 211 (560)
+|.. +++|+.|++++|++++ +|.. .++|+.|++++|.+++
T Consensus 252 l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 252 LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 4432 3677777777777774 3332 2445555555555554
No 344
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.88 E-value=1.3e-21 Score=208.63 Aligned_cols=204 Identities=27% Similarity=0.322 Sum_probs=105.3
Q ss_pred CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEee
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLS 85 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 85 (560)
+|++|+|++|+|+. +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|++++... .+++|+.|+++
T Consensus 62 ~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~ 129 (622)
T 3g06_A 62 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIF 129 (622)
T ss_dssp TCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEECC
T ss_pred CCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEECC
Confidence 45555555555552 232 34555555555555552 332 44555555555555553222 33445555555
Q ss_pred cCccCccCCCCcCCCCCccEEEccCCCccCCCCccCC-----------------CCCCCcEEECcCCcCcCCCCccCcCC
Q 035761 86 RNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLG-----------------HLTQLTTLNMYNNKLDGPIPPELMNC 148 (560)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-----------------~l~~L~~L~l~~n~l~~~~~~~~~~l 148 (560)
+|+|+. +|.. +++|++|+|++|.+++ +|..+. .+++|+.|++++|.+++ +|.. +
T Consensus 130 ~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~---~ 200 (622)
T 3g06_A 130 GNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTL---P 200 (622)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCC---C
T ss_pred CCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCc---c
Confidence 555552 2222 2455555555555553 222111 12455555555555553 2221 2
Q ss_pred CCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccCCCCcCCCC
Q 035761 149 SKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVPHLDVSGN 228 (560)
Q Consensus 149 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~l~~n 228 (560)
++|+.|++++|.++ .+|. .+++|+.|++++|+|++ +| ..+++|+.|++++|.|+. +|..+.++..|++++|
T Consensus 201 ~~L~~L~L~~N~l~-~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~~~~~L~~L~Ls~N 271 (622)
T 3g06_A 201 SELYKLWAYNNRLT-SLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPMLPSGLLSLSVYRN 271 (622)
T ss_dssp TTCCEEECCSSCCS-SCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSS
T ss_pred chhhEEECcCCccc-ccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCcccccCcEEeCCCC
Confidence 34444444444444 2222 23667777777777774 44 345677777777777774 3446667777777777
Q ss_pred CCCCcCCcccCC
Q 035761 229 QFGGEIPTTLAN 240 (560)
Q Consensus 229 ~~~~~~p~~~~~ 240 (560)
++.. +|.....
T Consensus 272 ~L~~-lp~~l~~ 282 (622)
T 3g06_A 272 QLTR-LPESLIH 282 (622)
T ss_dssp CCCS-CCGGGGG
T ss_pred CCCc-CCHHHhh
Confidence 7773 3443333
No 345
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.88 E-value=6.2e-23 Score=199.66 Aligned_cols=191 Identities=25% Similarity=0.302 Sum_probs=149.3
Q ss_pred EEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCc
Q 035761 9 HLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNE 88 (560)
Q Consensus 9 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 88 (560)
.+.+..+.+++.. .+..+++|++|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|++|+|++|.
T Consensus 28 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 3455566665432 245778888888888888754 3 47888888888888888886554 8888888999998888
Q ss_pred cCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchh
Q 035761 89 IGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQ 168 (560)
Q Consensus 89 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (560)
+++ ++ .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++..+
T Consensus 102 l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-- 173 (291)
T 1h6t_A 102 VKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 173 (291)
T ss_dssp CCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--
Confidence 885 33 488888899999999988853 4678888899999999988865 678888899999999998886554
Q ss_pred hccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCc
Q 035761 169 IGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPV 215 (560)
Q Consensus 169 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~ 215 (560)
+..+++|+.|++++|++++. + .+..+++|+.|++++|+++.....
T Consensus 174 l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~~~~ 218 (291)
T 1h6t_A 174 LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPIN 218 (291)
T ss_dssp GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECCCEE
T ss_pred hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCCccc
Confidence 88888999999999988853 3 378888899999999988864443
No 346
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.87 E-value=3.6e-22 Score=185.85 Aligned_cols=152 Identities=20% Similarity=0.223 Sum_probs=102.0
Q ss_pred CEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecC
Q 035761 8 VHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRN 87 (560)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 87 (560)
+.+++++|.++ .+|..+. ++|++|+|++|+|+++.+..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45677777776 3444443 56777777777777666666777777777777777777666667777777777777777
Q ss_pred ccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 88 EIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
+|+.+.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.|++..+..|..+++|+.|++++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 777555555666677777777777776666666666666777777777666655556666666666666666665
No 347
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.87 E-value=3.1e-22 Score=194.69 Aligned_cols=173 Identities=27% Similarity=0.325 Sum_probs=153.3
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEE
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
++++|++|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|+.|+|++|+++.. ..+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEE
Confidence 467899999999999855 3 48999999999999999996654 99999999999999999863 348999999999
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 9999999964 5688999999999999999965 679999999999999999997644 899999999999999999
Q ss_pred cccchhhccccccceeeccccccCCcC
Q 035761 163 GSIPSQIGKLQELYYLDLSGNFINGKI 189 (560)
Q Consensus 163 ~~~~~~~~~l~~L~~L~l~~n~l~~~~ 189 (560)
+. + .+..+++|+.|++++|++....
T Consensus 192 ~l-~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 192 DL-R-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp BC-G-GGTTCTTCSEEEEEEEEEECCC
T ss_pred CC-h-hhccCCCCCEEECcCCcccCCc
Confidence 54 4 4899999999999999998543
No 348
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.87 E-value=1.5e-21 Score=181.62 Aligned_cols=154 Identities=23% Similarity=0.242 Sum_probs=143.2
Q ss_pred CCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccC
Q 035761 31 LKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQ 110 (560)
Q Consensus 31 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 110 (560)
-+.+++++|.++ .+|..+. ++|+.|+|++|+|+.+.+..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 368999999999 5666554 7899999999999988888999999999999999999988899999999999999999
Q ss_pred CCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCC
Q 035761 111 NKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFING 187 (560)
Q Consensus 111 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 187 (560)
|+|+.+.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99997777788999999999999999999889999999999999999999998888889999999999999999964
No 349
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.87 E-value=2.2e-22 Score=202.23 Aligned_cols=181 Identities=25% Similarity=0.214 Sum_probs=158.3
Q ss_pred CCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccC-CCCCCCEEEeecCccCccCCCCcCCCCCccEEEcc
Q 035761 31 LKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIG-SLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLS 109 (560)
Q Consensus 31 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 109 (560)
-+++++++|.++ .+|..+. +.++.|+|++|+|+...+..|. ++++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 478999999998 5666554 4689999999999988888888 99999999999999998888899999999999999
Q ss_pred CCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhh---ccccccceeeccccccC
Q 035761 110 QNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQI---GKLQELYYLDLSGNFIN 186 (560)
Q Consensus 110 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~ 186 (560)
+|+|+...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998888889999999999999999998888999999999999999999997666556 57999999999999999
Q ss_pred CcCccccCCCce--eeEEEccCCccccccC
Q 035761 187 GKIPSQLGEFSC--IDTVDLSMNNLSGGIP 214 (560)
Q Consensus 187 ~~~~~~~~~~~~--L~~l~l~~n~l~~~~~ 214 (560)
...+..+..++. ++.|+|++|++.+...
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 777777777776 4789999999986543
No 350
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=4.1e-24 Score=215.10 Aligned_cols=225 Identities=17% Similarity=0.170 Sum_probs=182.1
Q ss_pred EEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCC----ccccCCC-CCCeeeccccccccccccccCCC-----CC
Q 035761 9 HLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIP----SNVGHLT-QLTTLAIASNRMNGSILLGIGSL-----KV 78 (560)
Q Consensus 9 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~----~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l-----~~ 78 (560)
.++|++|++++.+|..+...++|++|+|++|.+++..+ +.|.+++ +|++|+|++|+++...+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999888877777889999999999997666 7888998 99999999999998777777664 99
Q ss_pred CCEEEeecCccCccCCCC----cCCC-CCccEEEccCCCccCCCCccC----CC-CCCCcEEECcCCcCcCCCCc----c
Q 035761 79 LQVLDLSRNEIGGSIPST----LGHL-KWLRSVDLSQNKLVGPIPSSL----GH-LTQLTTLNMYNNKLDGPIPP----E 144 (560)
Q Consensus 79 L~~L~l~~n~l~~~~~~~----~~~l-~~L~~L~l~~n~l~~~~~~~~----~~-l~~L~~L~l~~n~l~~~~~~----~ 144 (560)
|++|+|++|.+++..+.. +..+ ++|++|+|++|.+++..+..+ .. .++|++|+|++|.+++..+. .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999766654 3444 899999999999987665443 33 36999999999999964433 3
Q ss_pred CcCCC-CCcEEEccCcccccccchhhc----cc-cccceeeccccccCCc----CccccCC-CceeeEEEccCCcccccc
Q 035761 145 LMNCS-KLRILKLGNNLLSGSIPSQIG----KL-QELYYLDLSGNFINGK----IPSQLGE-FSCIDTVDLSMNNLSGGI 213 (560)
Q Consensus 145 ~~~l~-~L~~L~l~~n~l~~~~~~~~~----~l-~~L~~L~l~~n~l~~~----~~~~~~~-~~~L~~l~l~~n~l~~~~ 213 (560)
+..++ +|+.|+|++|++++..+..+. .+ ++|++|+|++|++++. ++..+.. .++|+.|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 999999999999987776554 44 5999999999999864 3444544 458999999999999766
Q ss_pred C-------cccccCCCCcCCCCCCCCc
Q 035761 214 P-------VFVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 214 ~-------~~~~~l~~l~l~~n~~~~~ 233 (560)
+ ..+.+++.|++++|.+.+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i 268 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNM 268 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTC
T ss_pred HHHHHHHHhcCCCccEEEeccCCcccc
Confidence 5 2446788999999986543
No 351
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.87 E-value=3.7e-21 Score=205.06 Aligned_cols=201 Identities=23% Similarity=0.306 Sum_probs=151.4
Q ss_pred CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEee
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLS 85 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 85 (560)
++++|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+++ |. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSL-PV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCC-CC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcC-CC---CCCCCCEEECc
Confidence 5899999999999 6676665 89999999999999 4554 578999999999999854 43 77999999999
Q ss_pred cCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCc---CC--------------
Q 035761 86 RNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELM---NC-------------- 148 (560)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---~l-------------- 148 (560)
+|+|++ +|. .+++|+.|++++|+++. +|.. +++|++|+|++|.+++. |..+. .+
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~~~~~L~~L~L~~N~l~~l~~~~ 180 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PALPSELCKLWAYNNQLTSLPMLP 180 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CCCCTTCCEEECCSSCCSCCCCCC
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CCccCCCCEEECCCCCCCCCcccC
Confidence 999995 444 57889999999999995 5543 48999999999999853 33221 11
Q ss_pred CCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccccCCCCcCCCC
Q 035761 149 SKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVPHLDVSGN 228 (560)
Q Consensus 149 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~~l~l~~n 228 (560)
++|+.|++++|.+++ +|. .+++|+.|++++|.++. +|. .+++|+.|++++|.+++ +|..+.+++.|++++|
T Consensus 181 ~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp~~l~~L~~L~Ls~N 251 (622)
T 3g06_A 181 SGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LPVLPSELKELMVSGN 251 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSS
T ss_pred CCCcEEECCCCCCCC-CCC---ccchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CCCCCCcCcEEECCCC
Confidence 455555555555553 222 23455556666665552 332 23779999999999996 5577789999999999
Q ss_pred CCCCcCC
Q 035761 229 QFGGEIP 235 (560)
Q Consensus 229 ~~~~~~p 235 (560)
.+...++
T Consensus 252 ~L~~lp~ 258 (622)
T 3g06_A 252 RLTSLPM 258 (622)
T ss_dssp CCSCCCC
T ss_pred CCCcCCc
Confidence 9986533
No 352
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.87 E-value=2.1e-21 Score=180.59 Aligned_cols=153 Identities=18% Similarity=0.188 Sum_probs=98.3
Q ss_pred CEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCC-ccccCCCCCCeeeccccccccccccccCCCCCCCEEEeec
Q 035761 8 VHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIP-SNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSR 86 (560)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 86 (560)
+++++++|.++. +|..+. +.+++|+|++|+|++..+ ..|..+++|+.|+|++|+|+++.+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 467777777763 444443 345677777777765543 3466666777777777776666666666666666666666
Q ss_pred CccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccc
Q 035761 87 NEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSG 163 (560)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 163 (560)
|.|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|++++|.+..
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 66665555566666666666666666666666666666666666666666666556666666666666666666653
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.87 E-value=2.3e-22 Score=214.06 Aligned_cols=196 Identities=24% Similarity=0.290 Sum_probs=151.3
Q ss_pred CCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeec
Q 035761 7 LVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSR 86 (560)
Q Consensus 7 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 86 (560)
+..+.++.+.+++..+ +..+++|+.|+|++|.|..+ + .+..+++|+.|+|++|++++..+ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4455666777765433 56778888888888888743 3 57888888888888888886555 78888888888888
Q ss_pred CccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccc
Q 035761 87 NEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIP 166 (560)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 166 (560)
|.|++ ++ .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..|
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 88884 33 678888888888888888853 4578888888888888888865 678888888888888888886655
Q ss_pred hhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccc
Q 035761 167 SQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVR 218 (560)
Q Consensus 167 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~ 218 (560)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.+...+.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCS
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccc
Confidence 88888888888888888854 3578888888888888888865544333
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=6.2e-22 Score=184.23 Aligned_cols=155 Identities=20% Similarity=0.209 Sum_probs=119.9
Q ss_pred CCEEEccCCcceecCCccccCCCCCCeeeccccccccccc-cccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEcc
Q 035761 31 LKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSIL-LGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLS 109 (560)
Q Consensus 31 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 109 (560)
-+++++++|.++ .+|..+. +.++.|+|++|+|++..+ ..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 357888888887 4565543 456788888888886643 457788888888888888887777778888888888888
Q ss_pred CCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCc
Q 035761 110 QNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGK 188 (560)
Q Consensus 110 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 188 (560)
+|.+++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++...
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 8888877777788888888888888888877777788888888888888888877777777778888888888777643
No 355
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=2.7e-23 Score=207.11 Aligned_cols=219 Identities=16% Similarity=0.169 Sum_probs=185.7
Q ss_pred CCCEEEccCCcCcccCCCCCCCc--CCCCEEEccCCcceecCCccccCCCCCCeeeccccccccc-cccccCCCCCCCEE
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRL--SELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGS-ILLGIGSLKVLQVL 82 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L 82 (560)
.++.|++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.++.. .+..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4889999999887 4556777 8999999999999976665 56799999999999999865 78889999999999
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccCC-CccCC-CCccCCCCCCCcEEECcCC-cCcCC-CCccCcCCC-CCcEEEcc
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQN-KLVGP-IPSSLGHLTQLTTLNMYNN-KLDGP-IPPELMNCS-KLRILKLG 157 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~-~~~~~~~l~~L~~L~l~~n-~l~~~-~~~~~~~l~-~L~~L~l~ 157 (560)
+|++|.+++..+..+..+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|+.|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999999878888999999999999999 67742 5666888999999999999 88853 466688899 99999999
Q ss_pred Cc--ccc-cccchhhccccccceeeccccc-cCCcCccccCCCceeeEEEccCCc-cccccC---cccccCCCCcCCCC
Q 035761 158 NN--LLS-GSIPSQIGKLQELYYLDLSGNF-INGKIPSQLGEFSCIDTVDLSMNN-LSGGIP---VFVRKVPHLDVSGN 228 (560)
Q Consensus 158 ~n--~l~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~l~l~~n~-l~~~~~---~~~~~l~~l~l~~n 228 (560)
+| .++ +.++..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +..... ..+++++.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 99 455 3567788899999999999999 777788889999999999999995 333211 23567888999988
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.86 E-value=1.6e-21 Score=207.70 Aligned_cols=184 Identities=25% Similarity=0.305 Sum_probs=160.0
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEE
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVL 82 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 82 (560)
.|++|+.|++++|.|+.+ + .|..+++|+.|+|++|+|+++.| +..+++|+.|+|++|+++.. ..+..+++|+.|
T Consensus 41 ~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCEE
Confidence 467899999999999854 3 58999999999999999996655 99999999999999999853 378999999999
Q ss_pred EeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 83 DLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
+|++|.|++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|+
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 9999999953 4689999999999999999965 679999999999999999997655 899999999999999999
Q ss_pred cccchhhccccccceeeccccccCCcCccccCCCceee
Q 035761 163 GSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCID 200 (560)
Q Consensus 163 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 200 (560)
+. ..+..+++|+.|+|++|++.+.....+..+..+.
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~ 224 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPN 224 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEEC
T ss_pred CC--hHHccCCCCCEEEccCCcCcCCcccccccEEecc
Confidence 64 4689999999999999999866555544444443
No 357
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=1.1e-20 Score=177.02 Aligned_cols=151 Identities=25% Similarity=0.276 Sum_probs=84.3
Q ss_pred CEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecC
Q 035761 8 VHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRN 87 (560)
Q Consensus 8 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n 87 (560)
+.++.+++.++ .+|..+. ++|++|+|++|+|+++.|..|.++++|+.|+|++|+|+.+.+..|.++++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 45566666655 3333332 55666666666666555555666666666666666665444455555555666666666
Q ss_pred ccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc
Q 035761 88 EIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|.+.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 555444445555555555555555555 44555555555555555555555444444555555555555555554
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=1.4e-20 Score=176.24 Aligned_cols=152 Identities=23% Similarity=0.234 Sum_probs=74.8
Q ss_pred CCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccC
Q 035761 31 LKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQ 110 (560)
Q Consensus 31 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 110 (560)
.+.++.+++.++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|+...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 445666666655 3333332 4555555555555554455555555555555555555544444445555555555555
Q ss_pred CCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccC
Q 035761 111 NKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFIN 186 (560)
Q Consensus 111 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 186 (560)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 5555444444444555555555555554 33444444444444444444444333333444444444444444443
No 359
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.84 E-value=1.2e-23 Score=219.08 Aligned_cols=228 Identities=19% Similarity=0.170 Sum_probs=170.5
Q ss_pred CCCEEEccCCcCcc----cCCCCCCCcCCCCEEEccCCcceecCCccc-----cCCCCCCeeecccccccccc----ccc
Q 035761 6 NLVHLDLSDNHFMG----HIPPTLGRLSELKILNLSLNSLVGNIPSNV-----GHLTQLTTLAIASNRMNGSI----LLG 72 (560)
Q Consensus 6 ~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~L~~n~i~~~~----~~~ 72 (560)
+|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+ ...++|++|+|++|+++... +..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 79999999999984 457889999999999999999875444333 33568999999999988643 556
Q ss_pred cCCCCCCCEEEeecCccCccCCCCcC-----CCCCccEEEccCCCccCC----CCccCCCCCCCcEEECcCCcCcCCC--
Q 035761 73 IGSLKVLQVLDLSRNEIGGSIPSTLG-----HLKWLRSVDLSQNKLVGP----IPSSLGHLTQLTTLNMYNNKLDGPI-- 141 (560)
Q Consensus 73 ~~~l~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~-- 141 (560)
+..+++|++|++++|.++...+..+. .+++|+.|+|++|.++.. ++..+..+++|++|++++|.+++..
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 67788999999999998754333332 356899999999988853 4666777889999999999887432
Q ss_pred ---CccCcCCCCCcEEEccCcccccc----cchhhccccccceeeccccccCCcCccccCC-----CceeeEEEccCCcc
Q 035761 142 ---PPELMNCSKLRILKLGNNLLSGS----IPSQIGKLQELYYLDLSGNFINGKIPSQLGE-----FSCIDTVDLSMNNL 209 (560)
Q Consensus 142 ---~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-----~~~L~~l~l~~n~l 209 (560)
+..+..+++|+.|++++|.+++. ++..+..+++|++|++++|++.+..+..+.. .++|+.|++++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 22233578899999999988854 5667777888999999999886554443332 36888888888888
Q ss_pred cccc----Ccc---cccCCCCcCCCCCCCCc
Q 035761 210 SGGI----PVF---VRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 210 ~~~~----~~~---~~~l~~l~l~~n~~~~~ 233 (560)
++.. +.. +++++.|++++|++.+.
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 8653 222 26778888888887654
No 360
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.84 E-value=1.6e-23 Score=218.14 Aligned_cols=232 Identities=20% Similarity=0.147 Sum_probs=163.7
Q ss_pred CCCCCCCCEEEccCCcCcccCCCC-----CCCcCCCCEEEccCCcceec----CCccccCCCCCCeeecccccccccccc
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPT-----LGRLSELKILNLSLNSLVGN----IPSNVGHLTQLTTLAIASNRMNGSILL 71 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~-----~~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~ 71 (560)
|.++++|++|+|++|.+++..+.. +...++|++|+|++|.++.. ++..+..+++|++|+|++|+++...+.
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 188 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVR 188 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHH
Confidence 467889999999999987543332 22356799999999988853 355667788899999999988754444
Q ss_pred ccC-----CCCCCCEEEeecCccCcc----CCCCcCCCCCccEEEccCCCccCCC-----CccCCCCCCCcEEECcCCcC
Q 035761 72 GIG-----SLKVLQVLDLSRNEIGGS----IPSTLGHLKWLRSVDLSQNKLVGPI-----PSSLGHLTQLTTLNMYNNKL 137 (560)
Q Consensus 72 ~~~-----~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~-----~~~~~~l~~L~~L~l~~n~l 137 (560)
.+. ..++|++|+|++|.++.. ++..+..+++|++|+|++|.++... +..+..+++|++|++++|.+
T Consensus 189 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l 268 (461)
T 1z7x_W 189 VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268 (461)
T ss_dssp HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCC
Confidence 433 356888888888888853 3556677788888888888876432 23334578888888888888
Q ss_pred cCC----CCccCcCCCCCcEEEccCcccccccchhhccc-----cccceeeccccccCCc----CccccCCCceeeEEEc
Q 035761 138 DGP----IPPELMNCSKLRILKLGNNLLSGSIPSQIGKL-----QELYYLDLSGNFINGK----IPSQLGEFSCIDTVDL 204 (560)
Q Consensus 138 ~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~l~l 204 (560)
+.. ++..+..+++|+.|++++|.+++..+..+... ++|++|++++|.+++. ++..+..+++|+.|++
T Consensus 269 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 348 (461)
T 1z7x_W 269 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQI 348 (461)
T ss_dssp CHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEEC
T ss_pred CHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEc
Confidence 743 45566678888888888888876555444433 5788888888887754 3455566678888888
Q ss_pred cCCccccccCcc--------cccCCCCcCCCCCCCC
Q 035761 205 SMNNLSGGIPVF--------VRKVPHLDVSGNQFGG 232 (560)
Q Consensus 205 ~~n~l~~~~~~~--------~~~l~~l~l~~n~~~~ 232 (560)
++|.+++..+.. ..+++.|++++|++.+
T Consensus 349 s~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 349 SNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp CSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred cCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 888777554432 2367778888887764
No 361
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.84 E-value=2.1e-21 Score=185.77 Aligned_cols=165 Identities=24% Similarity=0.335 Sum_probs=76.4
Q ss_pred CCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeec
Q 035761 7 LVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSR 86 (560)
Q Consensus 7 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~ 86 (560)
+..+++++|.+++.. .+..+++|++|++++|.|+. ++ .+..+++|+.|+|++|+|++..+ +.++++|++|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 344455555555332 34455555555555555552 22 44555555555555555553333 45555555555555
Q ss_pred CccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccc
Q 035761 87 NEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIP 166 (560)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 166 (560)
|++++ ++. +.. ++|+.|+|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 95 N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 95 NRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp SCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTSCCCBC--
T ss_pred CccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCCcCcch--
Confidence 55553 222 111 4455555555554432 1344444444454444444432 1344444444444444444433
Q ss_pred hhhccccccceeeccccccC
Q 035761 167 SQIGKLQELYYLDLSGNFIN 186 (560)
Q Consensus 167 ~~~~~l~~L~~L~l~~n~l~ 186 (560)
..+..+++|+.|++++|++.
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEE
T ss_pred HHhccCCCCCEEeCCCCccc
Confidence 33444444444444444444
No 362
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=4.3e-20 Score=194.50 Aligned_cols=186 Identities=25% Similarity=0.343 Sum_probs=153.0
Q ss_pred CCCCcC-----CCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcC
Q 035761 24 TLGRLS-----ELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLG 98 (560)
Q Consensus 24 ~~~~l~-----~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 98 (560)
.+..++ +|+.|+|++|+|++ +|..+ +++|+.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.
T Consensus 49 ~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~ 119 (571)
T 3cvr_A 49 AVSLLKECLINQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LP 119 (571)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CC
T ss_pred hhhhccccccCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hh
Confidence 355555 89999999999996 66655 378999999999999 455 457999999999999996 666 66
Q ss_pred CCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhcccccccee
Q 035761 99 HLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYL 178 (560)
Q Consensus 99 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 178 (560)
+ +|+.|+|++|.|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|
T Consensus 120 ~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L 185 (571)
T 3cvr_A 120 A--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEAL 185 (571)
T ss_dssp T--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEE
T ss_pred c--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEE
Confidence 5 99999999999996 555 68999999999999996 554 57899999999999996 666 66 899999
Q ss_pred eccccccCCcCccccCCCcee-------eEEEccCCccccccCcc---cccCCCCcCCCCCCCCcCCcc
Q 035761 179 DLSGNFINGKIPSQLGEFSCI-------DTVDLSMNNLSGGIPVF---VRKVPHLDVSGNQFGGEIPTT 237 (560)
Q Consensus 179 ~l~~n~l~~~~~~~~~~~~~L-------~~l~l~~n~l~~~~~~~---~~~l~~l~l~~n~~~~~~p~~ 237 (560)
+|++|+|+ .+|. +.. +| +.|+|++|+|+. +|.. ++++..|++++|++.+..|..
T Consensus 186 ~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 186 DVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp ECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred ECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 99999999 5666 554 77 999999999995 4543 467778999999998865544
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=5.7e-21 Score=182.81 Aligned_cols=175 Identities=24% Similarity=0.307 Sum_probs=152.2
Q ss_pred CcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEE
Q 035761 27 RLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSV 106 (560)
Q Consensus 27 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 106 (560)
.+.++..+++++|.++++. .+..+++|+.|++++|+++.. + .+..+++|++|+|++|+|++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 5677889999999998553 688999999999999999854 4 78899999999999999996544 9999999999
Q ss_pred EccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccC
Q 035761 107 DLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFIN 186 (560)
Q Consensus 107 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 186 (560)
+|++|++++. +. +.. ++|+.|+|++|++++. ..+..+++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 9999999964 43 333 9999999999999964 4699999999999999999965 3 6899999999999999999
Q ss_pred CcCccccCCCceeeEEEccCCccccccCcc
Q 035761 187 GKIPSQLGEFSCIDTVDLSMNNLSGGIPVF 216 (560)
Q Consensus 187 ~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~ 216 (560)
+. ..+..+++|+.|++++|++++.....
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~~~~~ 191 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNEPVKY 191 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECCCEEC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCCcccc
Confidence 76 77899999999999999999775443
No 364
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.82 E-value=2.2e-20 Score=170.72 Aligned_cols=156 Identities=17% Similarity=0.226 Sum_probs=131.3
Q ss_pred CCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCc
Q 035761 24 TLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWL 103 (560)
Q Consensus 24 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 103 (560)
....+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3467889999999999998 455 68889999999999997763 3478889999999999999997778889999999
Q ss_pred cEEEccCCCccCCCCccCCCCCCCcEEECcCCc-CcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccc
Q 035761 104 RSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNK-LDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSG 182 (560)
Q Consensus 104 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 182 (560)
++|+|++|.+++..+..+..+++|++|++++|. ++. ++ .+..+++|+.|++++|.+++. + .+..+++|++|++++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECB
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeC
Confidence 999999999987778889999999999999998 664 44 688999999999999999853 3 788999999999999
Q ss_pred cccCC
Q 035761 183 NFING 187 (560)
Q Consensus 183 n~l~~ 187 (560)
|++.+
T Consensus 191 N~i~~ 195 (197)
T 4ezg_A 191 QTIGG 195 (197)
T ss_dssp C----
T ss_pred cccCC
Confidence 99864
No 365
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.82 E-value=2.8e-20 Score=170.02 Aligned_cols=156 Identities=17% Similarity=0.237 Sum_probs=132.4
Q ss_pred cccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCC
Q 035761 48 NVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQL 127 (560)
Q Consensus 48 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 127 (560)
....+++|+.|++++|.++. .+ .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..+..+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 34667899999999999984 44 68889999999999998773 3478899999999999999997778889999999
Q ss_pred cEEECcCCcCcCCCCccCcCCCCCcEEEccCcc-cccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccC
Q 035761 128 TTLNMYNNKLDGPIPPELMNCSKLRILKLGNNL-LSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSM 206 (560)
Q Consensus 128 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~ 206 (560)
++|++++|.+++..+..+..+++|+.|++++|. ++ .+| .+..+++|++|++++|++++. + .+..+++|+.|++++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECB
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeC
Confidence 999999999998778889999999999999998 66 445 689999999999999999853 3 788899999999999
Q ss_pred Ccccc
Q 035761 207 NNLSG 211 (560)
Q Consensus 207 n~l~~ 211 (560)
|++.+
T Consensus 191 N~i~~ 195 (197)
T 4ezg_A 191 QTIGG 195 (197)
T ss_dssp C----
T ss_pred cccCC
Confidence 99864
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=1.2e-22 Score=215.17 Aligned_cols=107 Identities=23% Similarity=0.313 Sum_probs=62.2
Q ss_pred ccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccc
Q 035761 103 LRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSG 182 (560)
Q Consensus 103 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 182 (560)
|+.|+|++|.|++ +|. |.++++|+.|+|++|.|+ .+|..+..+++|+.|+|++|.|++ +| .+..+++|++|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 5556666666653 343 555666666666666665 445556666666666666666653 34 555666666666666
Q ss_pred cccCCcC-ccccCCCceeeEEEccCCccccccC
Q 035761 183 NFINGKI-PSQLGEFSCIDTVDLSMNNLSGGIP 214 (560)
Q Consensus 183 n~l~~~~-~~~~~~~~~L~~l~l~~n~l~~~~~ 214 (560)
|+|++.. |..+..+++|+.|+|++|++++.+|
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 6665544 5556666666666666666655544
No 367
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=4e-20 Score=176.38 Aligned_cols=139 Identities=22% Similarity=0.257 Sum_probs=106.4
Q ss_pred CcccceeeccCCeeEEEEEe-CCCcE--EEEEEccchhhhh----------------------hhHHHHHHHHHHHhccC
Q 035761 317 FDIKYCIGTGGYGSVYRARL-PSGKV--VALKKLHRLETEL----------------------ASLESFQNEARLLSQIR 371 (560)
Q Consensus 317 ~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~----------------------~~~~~~~~e~~~l~~l~ 371 (560)
|++.+.||+|+||.||+|.. .+|+. ||||+++...... .....+.+|+.++..++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999987 67888 9999875432110 11235788999999998
Q ss_pred CCCc--ceeeeEEEeCCEEEEEEeccCC-C----CHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEEe
Q 035761 372 HRNI--VKLYGFCLHEKCMFLIYEYMEM-G----SLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLH-HHCTPPILHR 443 (560)
Q Consensus 372 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~ 443 (560)
|+++ ..++++ +..++||||+.+ | +|.++... .++.++..++.|++.||+||| +. ||+||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 8764 333332 245899999942 4 66665432 234556789999999999999 88 99999
Q ss_pred CCCCCCeEeCCCCcEEEeeeccccccC
Q 035761 444 DISSNNILLNSEFEAFVADFGIARLLN 470 (560)
Q Consensus 444 dlk~~Nill~~~~~~kl~Dfg~~~~~~ 470 (560)
||||+|||+++ .++|+|||+|....
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCHHHEEEcC--cEEEEECcccccCC
Confidence 99999999998 99999999997653
No 368
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.80 E-value=9.7e-20 Score=165.56 Aligned_cols=130 Identities=24% Similarity=0.339 Sum_probs=89.0
Q ss_pred CEEEccCCcceecCCccccCCCCCCeeecccccccccccc-ccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccC
Q 035761 32 KILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILL-GIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQ 110 (560)
Q Consensus 32 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 110 (560)
++|++++|.++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67777777776 45554432 677777777777755543 366777777777777777766667777777777777777
Q ss_pred CCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccc
Q 035761 111 NKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGS 164 (560)
Q Consensus 111 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 164 (560)
|+|++..+..|.++++|++|+|++|++++..|..|..+++|+.|++++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 777766666666777777777777777766666666666777777766666643
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1e-21 Score=207.99 Aligned_cols=197 Identities=20% Similarity=0.218 Sum_probs=157.1
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCc-------------ceecCCccccCCCCCCeee-cccccccc
Q 035761 2 GRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNS-------------LVGNIPSNVGHLTQLTTLA-IASNRMNG 67 (560)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-------------i~~~~~~~~~~l~~L~~L~-L~~n~i~~ 67 (560)
...++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+..|..+.++++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 45678899999999997 678889999999999997775 4456677788888888888 56654432
Q ss_pred cccc-----ccCC--CCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCC
Q 035761 68 SILL-----GIGS--LKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGP 140 (560)
Q Consensus 68 ~~~~-----~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 140 (560)
.... .+.. ...|+.|+|++|+|++ +|. +..+++|+.|+|++|.|+ .+|..|.++++|+.|+|++|.|++
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~- 500 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN- 500 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-
Confidence 1100 0111 1258999999999995 566 999999999999999999 778899999999999999999996
Q ss_pred CCccCcCCCCCcEEEccCccccccc-chhhccccccceeeccccccCCcCccc---cCCCceeeEEEc
Q 035761 141 IPPELMNCSKLRILKLGNNLLSGSI-PSQIGKLQELYYLDLSGNFINGKIPSQ---LGEFSCIDTVDL 204 (560)
Q Consensus 141 ~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~---~~~~~~L~~l~l 204 (560)
+| .+..+++|+.|+|++|+|++.. |..|..+++|+.|+|++|++++.+|.. +..+++|+.|++
T Consensus 501 lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 55 8999999999999999999776 899999999999999999998665532 233677888764
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=7.4e-19 Score=159.72 Aligned_cols=173 Identities=23% Similarity=0.294 Sum_probs=82.8
Q ss_pred CeeeccccccccccccccCCCCCCCEEEeecCccCccCCC-CcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcC
Q 035761 56 TTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPS-TLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYN 134 (560)
Q Consensus 56 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 134 (560)
+.|++++|+++ .+|..+. .+|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 44555555554 2222222 1455555555555543332 244555555555555555544455555555555555555
Q ss_pred CcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCcc-ccCCCceeeEEEccCCcccccc
Q 035761 135 NKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPS-QLGEFSCIDTVDLSMNNLSGGI 213 (560)
Q Consensus 135 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~~~~L~~l~l~~n~l~~~~ 213 (560)
|+|++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++.+..+- ++. ..++...+..+...+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~--~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH--HHHHHcCCCCCCCCCCC
Confidence 555544444455555555555555555544455555555555555555555433221 000 01111123334445555
Q ss_pred CcccccCCCCcCCCCCCCCc
Q 035761 214 PVFVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 214 ~~~~~~l~~l~l~~n~~~~~ 233 (560)
|..++.....++..+.+.|.
T Consensus 166 P~~l~~~~l~~l~~~~~~C~ 185 (192)
T 1w8a_A 166 PSKVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp STTTTTSBGGGSCTTTCCCC
T ss_pred ChHHcCCChhhCcHhhcCcC
Confidence 65555555566666666554
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=8.2e-20 Score=199.37 Aligned_cols=191 Identities=20% Similarity=0.207 Sum_probs=123.6
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCC-----EEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCC
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELK-----ILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVL 79 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~-----~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 79 (560)
+.++.|+|.+|.+... +..+.....|. .++++.|.+. ..++.|..+++|+.|+|++|.+. .++..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCcc-hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 4588999999999853 43332222222 2334444454 66888999999999999999998 556666699999
Q ss_pred CEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCc
Q 035761 80 QVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 159 (560)
++|+|++|.|+ .+|..|.++++|++|+|++|+|+ .+|..|.+|++|++|+|++|.|+ .+|..|..+++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 99999999999 78889999999999999999999 77999999999999999999998 67888999999999999999
Q ss_pred ccccccchhhccccc-cceeeccccccCCcCccccCCCceeeEEEccCC
Q 035761 160 LLSGSIPSQIGKLQE-LYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMN 207 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n 207 (560)
.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.|
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 999988988866533 345899999999888765 445566666
No 372
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=7e-19 Score=174.38 Aligned_cols=210 Identities=11% Similarity=0.020 Sum_probs=128.1
Q ss_pred CCCCCEEEccCCcCc--ccCCCCCCCcCCCCEEEccCCcceecCCccccC--------CCCCCeeecccccccccccccc
Q 035761 4 LRNLVHLDLSDNHFM--GHIPPTLGRLSELKILNLSLNSLVGNIPSNVGH--------LTQLTTLAIASNRMNGSILLGI 73 (560)
Q Consensus 4 l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~--------l~~L~~L~L~~n~i~~~~~~~~ 73 (560)
+++|++|||++|+|. ......+. .++.+.+..|. +.+.+|.+ +++|+.|+|.+ .++.+...+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTE---ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCcccccc---ccccccccccc---cCHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678999999999998 22222222 23344444442 23344555 55555555555 5555555555
Q ss_pred CCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCc----cCCCCccC----------------------------
Q 035761 74 GSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKL----VGPIPSSL---------------------------- 121 (560)
Q Consensus 74 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l----~~~~~~~~---------------------------- 121 (560)
.++++|+.|++++|.++.+.+..|.++.++..+.+..+.. .......|
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 5555566666655555555555555555555444433111 00000000
Q ss_pred ----------------------CCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccc-ee
Q 035761 122 ----------------------GHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELY-YL 178 (560)
Q Consensus 122 ----------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L 178 (560)
..+++|+.|+|++|+++.+.+.+|.++++|+.|++.+| ++.+.+.+|.++.+|+ .+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 02677888888887777666667888888888888777 6666777778888887 88
Q ss_pred eccccccCCcCccccCCCceeeEEEccCCccccccCcccccCCC
Q 035761 179 DLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVRKVPH 222 (560)
Q Consensus 179 ~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~~l~~ 222 (560)
++.+ .++.+.+..|..+++|+.+++++|.++...+..+.+++.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~ 322 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVP 322 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCC
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcc
Confidence 8877 666666777888888888888777777666665554443
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=6e-20 Score=200.46 Aligned_cols=167 Identities=26% Similarity=0.285 Sum_probs=124.0
Q ss_pred CCEEEccCCcCcc---------cCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCC
Q 035761 7 LVHLDLSDNHFMG---------HIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLK 77 (560)
Q Consensus 7 L~~L~L~~n~l~~---------~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 77 (560)
++.++|+.|.|++ ..++.|..+++|++|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|.+++
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 4555555555543 45888999999999999999999 67777779999999999999999 7788899999
Q ss_pred CCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCC-CcEEEc
Q 035761 78 VLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSK-LRILKL 156 (560)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l 156 (560)
+|++|+|++|.|+ .+|..|.++++|++|+|++|.|+ .+|..|.++++|+.|+|++|.|++.+|..+..+.. +..|+|
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 9999999999999 67999999999999999999998 67888999999999999999999888877765432 235889
Q ss_pred cCcccccccchhhccccccceeecccc
Q 035761 157 GNNLLSGSIPSQIGKLQELYYLDLSGN 183 (560)
Q Consensus 157 ~~n~l~~~~~~~~~~l~~L~~L~l~~n 183 (560)
++|.+++.+|. .|+.|+++.|
T Consensus 349 ~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 349 RDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp HHCCCCCCCCC------C---------
T ss_pred ccCcccCcCcc------ccceeEeecc
Confidence 99999988776 4566777777
No 374
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.75 E-value=2.1e-18 Score=153.22 Aligned_cols=132 Identities=21% Similarity=0.200 Sum_probs=91.5
Q ss_pred CCCCEEEccCCcce-ecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEE
Q 035761 29 SELKILNLSLNSLV-GNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVD 107 (560)
Q Consensus 29 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 107 (560)
++|++|+|++|.++ +.+|..+..+++|+.|+|++|.++.. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 45566666777777777777777654 5666777777777777777755666666677777777
Q ss_pred ccCCCccCCCC-ccCCCCCCCcEEECcCCcCcCCCC---ccCcCCCCCcEEEccCcccc
Q 035761 108 LSQNKLVGPIP-SSLGHLTQLTTLNMYNNKLDGPIP---PELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 108 l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l~~n~l~ 162 (560)
|++|.+++... ..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777774322 567777777777777777775444 36777777777777777776
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.75 E-value=5e-18 Score=150.77 Aligned_cols=132 Identities=26% Similarity=0.241 Sum_probs=90.3
Q ss_pred CCCCeeeccccccc-cccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEE
Q 035761 53 TQLTTLAIASNRMN-GSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLN 131 (560)
Q Consensus 53 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 131 (560)
++|+.|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 66777777777776 45566667777777777777777754 5667777777777777777755666666677777777
Q ss_pred CcCCcCcCCCC-ccCcCCCCCcEEEccCcccccccc---hhhccccccceeeccccccC
Q 035761 132 MYNNKLDGPIP-PELMNCSKLRILKLGNNLLSGSIP---SQIGKLQELYYLDLSGNFIN 186 (560)
Q Consensus 132 l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l~~n~l~ 186 (560)
|++|.+++... ..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777764322 566677777777777777765444 36666777777777777665
No 376
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.75 E-value=1.2e-17 Score=151.60 Aligned_cols=128 Identities=23% Similarity=0.283 Sum_probs=87.9
Q ss_pred CEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCC
Q 035761 32 KILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQN 111 (560)
Q Consensus 32 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 111 (560)
+++++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666666666 3444332 46666666666666 44466666777777777777777666666777777777777777
Q ss_pred CccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccc
Q 035761 112 KLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSG 163 (560)
Q Consensus 112 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 163 (560)
+|+++.+..|.++++|+.|+|++|.|+...+..|..+++|+.|++++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 7776666677777777777777777776655667777778888888887763
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1.5e-18 Score=172.00 Aligned_cols=228 Identities=11% Similarity=0.062 Sum_probs=160.7
Q ss_pred CCCCEEEccCCcCcccCCCCCCC-cCCCCEEEccCCcce--ecCCccccCCCCCCeeeccccccccccccccCC------
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGR-LSELKILNLSLNSLV--GNIPSNVGHLTQLTTLAIASNRMNGSILLGIGS------ 75 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~------ 75 (560)
.+|+.|.++++ +.......+.. +++|++|||++|+|. ...+..+ +.+..+.+..|. +....|.+
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---VPAYAFSNVVNGVT 97 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---ECTTTTEEEETTEE
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccc---cCHHHhcccccccc
Confidence 45677777764 22111112222 677888888888776 3333222 224555555553 44667777
Q ss_pred --CCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcC----cCCCCccC----
Q 035761 76 --LKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKL----DGPIPPEL---- 145 (560)
Q Consensus 76 --l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l----~~~~~~~~---- 145 (560)
+++|+.|+|.+ +++.+.+.+|.++++|+.|++++|.+..+.+.+|.++.++..+.+..+.. .......|
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 99999999998 88878888899999999999999998878888999888888877766321 11111111
Q ss_pred ----------------------------------------------cCCCCCcEEEccCcccccccchhhccccccceee
Q 035761 146 ----------------------------------------------MNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLD 179 (560)
Q Consensus 146 ----------------------------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 179 (560)
..+++|+.|++++|+++.+.+..|.++.+|+.|+
T Consensus 177 ~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~ 256 (329)
T 3sb4_A 177 PLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIK 256 (329)
T ss_dssp CCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEE
T ss_pred ccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEE
Confidence 0278999999999999977888899999999999
Q ss_pred ccccccCCcCccccCCCceee-EEEccCCccccccCccc---ccCCCCcCCCCCCCCcCCcccCCCC
Q 035761 180 LSGNFINGKIPSQLGEFSCID-TVDLSMNNLSGGIPVFV---RKVPHLDVSGNQFGGEIPTTLANVP 242 (560)
Q Consensus 180 l~~n~l~~~~~~~~~~~~~L~-~l~l~~n~l~~~~~~~~---~~l~~l~l~~n~~~~~~p~~~~~~~ 242 (560)
|.+| +..+.+..|..+.+|+ .+++.+ .++...+..+ .+|+.+++.+|.+....+....+.+
T Consensus 257 l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~ 321 (329)
T 3sb4_A 257 LPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGV 321 (329)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTC
T ss_pred CCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCc
Confidence 9988 7777788899999998 999988 6665555554 4567778888888776555555443
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=1.7e-17 Score=150.72 Aligned_cols=130 Identities=22% Similarity=0.303 Sum_probs=79.3
Q ss_pred CEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCc
Q 035761 80 QVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 159 (560)
+++++++|+++ .+|..+. ++|+.|+|++|.|+ .+|..|.++++|+.|+|++|.|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34555555555 3343332 35666666666665 44556666666666666666666555556666666666666666
Q ss_pred ccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCcccccc
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGI 213 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~ 213 (560)
.|++..+..|..+++|++|+|++|+|+...+..|..+++|+.|++++|++.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 666555556666666666666666666555555666666677777777666543
No 379
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.72 E-value=3.8e-18 Score=148.30 Aligned_cols=127 Identities=20% Similarity=0.234 Sum_probs=73.6
Q ss_pred CCCCEEEccCCcce-ecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEE
Q 035761 29 SELKILNLSLNSLV-GNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVD 107 (560)
Q Consensus 29 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 107 (560)
++|++|++++|.++ +.+|..+..+++|+.|+|++|++++. ..+.++++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45555555555555 44455555555555555555555543 4555566666666666666644555555566666666
Q ss_pred ccCCCccCC-CCccCCCCCCCcEEECcCCcCcCCCC---ccCcCCCCCcEEEcc
Q 035761 108 LSQNKLVGP-IPSSLGHLTQLTTLNMYNNKLDGPIP---PELMNCSKLRILKLG 157 (560)
Q Consensus 108 l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l~ 157 (560)
+++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666532 22556666666666666666665444 356666666666654
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=6.9e-17 Score=144.69 Aligned_cols=132 Identities=23% Similarity=0.213 Sum_probs=90.4
Q ss_pred CCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccC
Q 035761 31 LKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQ 110 (560)
Q Consensus 31 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 110 (560)
.+.+++++|+++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 355666666665 3333222 4666666666666655555666777777777777777765556667777777777777
Q ss_pred CCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCccccccc
Q 035761 111 NKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSI 165 (560)
Q Consensus 111 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 165 (560)
|++++..+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 7777666666777778888888888777665556677788888888888877543
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.71 E-value=1e-17 Score=145.55 Aligned_cols=127 Identities=23% Similarity=0.263 Sum_probs=73.6
Q ss_pred CCCCeeeccccccc-cccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEE
Q 035761 53 TQLTTLAIASNRMN-GSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLN 131 (560)
Q Consensus 53 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 131 (560)
++|+.|++++|.++ +..|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666666666665 44555556666666666666666643 4555666666666666666644555555566666666
Q ss_pred CcCCcCcCC-CCccCcCCCCCcEEEccCcccccccc---hhhccccccceeecc
Q 035761 132 MYNNKLDGP-IPPELMNCSKLRILKLGNNLLSGSIP---SQIGKLQELYYLDLS 181 (560)
Q Consensus 132 l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l~ 181 (560)
+++|.+++. .+..+..+++|+.|++++|.+++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666542 22455556666666666666654433 345555566655554
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=8.8e-17 Score=144.02 Aligned_cols=129 Identities=23% Similarity=0.224 Sum_probs=62.1
Q ss_pred CeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCC
Q 035761 56 TTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNN 135 (560)
Q Consensus 56 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 135 (560)
+.+++++|+++.. |..+ .++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4445555554422 2211 134555555555555444444455555555555555555444444455555555555555
Q ss_pred cCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCC
Q 035761 136 KLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFING 187 (560)
Q Consensus 136 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 187 (560)
.+++..+..+..+++|+.|++++|.+++..+..|..+++|++|++++|++.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 5554444444455555555555555554433334445555555555555543
No 383
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.69 E-value=7.6e-17 Score=159.40 Aligned_cols=142 Identities=13% Similarity=0.135 Sum_probs=101.9
Q ss_pred cCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhh------------hhhHH--------HHHHHHHHHhccCCCC
Q 035761 315 EDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETE------------LASLE--------SFQNEARLLSQIRHRN 374 (560)
Q Consensus 315 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~~--------~~~~e~~~l~~l~h~n 374 (560)
.=|++...||+|+||.||+|...+|+.||||+++..... ..... ...+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 348889999999999999999989999999987532110 00001 1234666677765544
Q ss_pred cceeeeEEEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCC
Q 035761 375 IVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNS 454 (560)
Q Consensus 375 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~ 454 (560)
+....-+.... .+|||||+++++|..+... .+...++.|++.+|.|||+. |||||||||.|||+++
T Consensus 175 v~vp~p~~~~~--~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQSR--HTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEEET--TEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCCeeeeccC--ceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 43222222222 3699999999888655432 12356889999999999998 9999999999999988
Q ss_pred CC----------cEEEeeeccccccC
Q 035761 455 EF----------EAFVADFGIARLLN 470 (560)
Q Consensus 455 ~~----------~~kl~Dfg~~~~~~ 470 (560)
++ .+.|+||+-+....
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCcccccccccceEEEEeCCcccCC
Confidence 76 38999999776543
No 384
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.67 E-value=1.8e-18 Score=185.97 Aligned_cols=229 Identities=15% Similarity=0.096 Sum_probs=159.6
Q ss_pred CCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCC-ccccCCCCCCeeecccccccc-ccccccCCCCCCC
Q 035761 3 RLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIP-SNVGHLTQLTTLAIASNRMNG-SILLGIGSLKVLQ 80 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~ 80 (560)
.+++|+.|+++++... .+|..+..+++|++|+|++|.++.... ..+.++++|+.|+++ |.+.. ..+..+..+++|+
T Consensus 268 ~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~ 345 (592)
T 3ogk_B 268 FPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLK 345 (592)
T ss_dssp CCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCC
T ss_pred ccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCC
Confidence 4455566666554332 455666777888888888888664332 335778888888888 44432 3344445678888
Q ss_pred EEEee-----------cCccCccC-CCCcCCCCCccEEEccCCCccCCCCccCCC-CCCCcEEECc----CCcCcCC---
Q 035761 81 VLDLS-----------RNEIGGSI-PSTLGHLKWLRSVDLSQNKLVGPIPSSLGH-LTQLTTLNMY----NNKLDGP--- 140 (560)
Q Consensus 81 ~L~l~-----------~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~----~n~l~~~--- 140 (560)
+|+|+ .|.++... +..+..+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++.
T Consensus 346 ~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~ 425 (592)
T 3ogk_B 346 RLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD 425 (592)
T ss_dssp EEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCH
T ss_pred EEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHH
Confidence 88888 35665321 222345788999999888887655555554 8899999996 6677753
Q ss_pred --CCccCcCCCCCcEEEccCcc--cccccchhhc-cccccceeeccccccCCc-CccccCCCceeeEEEccCCccccccC
Q 035761 141 --IPPELMNCSKLRILKLGNNL--LSGSIPSQIG-KLQELYYLDLSGNFINGK-IPSQLGEFSCIDTVDLSMNNLSGGIP 214 (560)
Q Consensus 141 --~~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~-~l~~L~~L~l~~n~l~~~-~~~~~~~~~~L~~l~l~~n~l~~~~~ 214 (560)
++..+..+++|+.|++++|. +++..+..+. .+++|++|++++|++++. .+..+..+++|+.|++++|++++...
T Consensus 426 ~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 22236678999999998543 6665555554 488999999999999863 45566788999999999999875433
Q ss_pred c----ccccCCCCcCCCCCCCCc
Q 035761 215 V----FVRKVPHLDVSGNQFGGE 233 (560)
Q Consensus 215 ~----~~~~l~~l~l~~n~~~~~ 233 (560)
. .+++++.|++++|+++..
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHhcCccCeeECcCCcCCHH
Confidence 2 357889999999997754
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.66 E-value=5.9e-17 Score=144.97 Aligned_cols=105 Identities=22% Similarity=0.218 Sum_probs=54.1
Q ss_pred CCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCc--cCcCCCCCcEEE
Q 035761 78 VLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPP--ELMNCSKLRILK 155 (560)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~ 155 (560)
+|++|+|++|.|++. ..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.++ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 444444444444432 34444555555555555555333333355555555555555554 2232 455555666666
Q ss_pred ccCcccccccch----hhccccccceeeccccccC
Q 035761 156 LGNNLLSGSIPS----QIGKLQELYYLDLSGNFIN 186 (560)
Q Consensus 156 l~~n~l~~~~~~----~~~~l~~L~~L~l~~n~l~ 186 (560)
+++|.++ ..|. .+..+++|+.|++++|.+.
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666665 2333 2566666666666666554
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.66 E-value=1.1e-16 Score=143.23 Aligned_cols=133 Identities=20% Similarity=0.190 Sum_probs=74.1
Q ss_pred CCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCcc
Q 035761 25 LGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLR 104 (560)
Q Consensus 25 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 104 (560)
+.++++|++|++++|+++. +|......++|+.|+|++|++++. ..|.++++|++|+|++|+|++..+..|..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 4455566666666666653 233222223666666666666543 4555666666666666666644334445566666
Q ss_pred EEEccCCCccCCCCc--cCCCCCCCcEEECcCCcCcCCCCc----cCcCCCCCcEEEccCcccc
Q 035761 105 SVDLSQNKLVGPIPS--SLGHLTQLTTLNMYNNKLDGPIPP----ELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 105 ~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~----~~~~l~~L~~L~l~~n~l~ 162 (560)
+|+|++|.++ .+|. .+..+++|+.|++++|.++. .|. .+..+++|+.|++++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666666665 3333 55556666666666666653 233 2555666666666666554
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.66 E-value=1.7e-15 Score=153.23 Aligned_cols=222 Identities=9% Similarity=0.036 Sum_probs=174.3
Q ss_pred CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEee
Q 035761 6 NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLS 85 (560)
Q Consensus 6 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 85 (560)
+|+.++|..| ++.+...+|.+. +|+.+.|.. .++.+.+.+|.++++|+.++|.+|+++.+....|. ..+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 6899998776 777888888884 799999986 67778888999999999999999999877777777 5889999998
Q ss_pred cCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccc---
Q 035761 86 RNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLS--- 162 (560)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--- 162 (560)
.+ ++.+...+|.++++|+.+++.+| ++.+...+|.+ .+|+.+.|. |.++.+...+|.+|++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 44 77677888999999999999875 55577778887 789999984 5566566778999999999999888765
Q ss_pred --cccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccc--cCCCCcCCCCCCCCcCCcc
Q 035761 163 --GSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVR--KVPHLDVSGNQFGGEIPTT 237 (560)
Q Consensus 163 --~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~--~l~~l~l~~n~~~~~~p~~ 237 (560)
.+.+..|.++++|+.++|. +.++......|..+.+|+.+++..| ++......+. +++.+++.+|......+..
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~~~l~~~~ 364 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTPPQVFEKV 364 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSCCBCCCSS
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCCccccccc
Confidence 4667788899999999998 4577677788888899999998555 5543333332 6777888888765443333
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=2.1e-15 Score=152.63 Aligned_cols=205 Identities=11% Similarity=0.079 Sum_probs=175.6
Q ss_pred CCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEe
Q 035761 5 RNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDL 84 (560)
Q Consensus 5 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 84 (560)
.+|+.+.|.+ .++.+...+|.++++|+.++|++|+++.+...+|. ..+|+.+.|.++ ++.+...+|.++++|+.+++
T Consensus 157 ~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 157 STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 3699999986 78878889999999999999999999988788887 689999999855 88788999999999999999
Q ss_pred ecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCc-----CCCCccCcCCCCCcEEEccCc
Q 035761 85 SRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLD-----GPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~l~~n 159 (560)
..| ++.+...+|.+ .+|+.+.|. |.++.+...+|.+|++|+.+.+.+|.+. .+.+.+|.+|++|+.+++.+
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~- 309 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE- 309 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-
T ss_pred CCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-
Confidence 875 67677778888 789999994 5566678899999999999999998775 45677899999999999994
Q ss_pred ccccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCCccccccCcccc
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFVR 218 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~~ 218 (560)
.++.+....|.++.+|+.++|..| ++......|..+ +|+.+++++|.+....+..+.
T Consensus 310 ~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~ 366 (401)
T 4fdw_A 310 SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWY 366 (401)
T ss_dssp TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCC
T ss_pred ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccccccc
Confidence 587788889999999999999655 776778899999 999999999988765555443
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.63 E-value=1.3e-18 Score=159.12 Aligned_cols=152 Identities=25% Similarity=0.300 Sum_probs=82.7
Q ss_pred cCCCCEEEccCCcceecCCc------cccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCC
Q 035761 28 LSELKILNLSLNSLVGNIPS------NVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLK 101 (560)
Q Consensus 28 l~~L~~L~L~~N~i~~~~~~------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 101 (560)
..+++.++++.|.+.+..|. .|..+++|++|+|++|++++ +| .+.++++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34455555555555544443 55556666666666666654 33 5555566666666666665 3454555555
Q ss_pred CccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCC-ccCcCCCCCcEEEccCcccccccch----------hhc
Q 035761 102 WLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIP-PELMNCSKLRILKLGNNLLSGSIPS----------QIG 170 (560)
Q Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~----------~~~ 170 (560)
+|+.|+|++|++++ +| .+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+++..|. .+.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 66666666666653 22 35555666666666666653221 2455566666666666666544332 245
Q ss_pred cccccceeeccccccC
Q 035761 171 KLQELYYLDLSGNFIN 186 (560)
Q Consensus 171 ~l~~L~~L~l~~n~l~ 186 (560)
.+++|+.|+ +|+++
T Consensus 172 ~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVD 185 (198)
T ss_dssp HCSSCSEEC--CGGGT
T ss_pred hCCCcEEEC--CcccC
Confidence 555555554 44443
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=2.2e-18 Score=157.48 Aligned_cols=137 Identities=22% Similarity=0.251 Sum_probs=81.7
Q ss_pred ccCCCCCCeeecccccccccccc------ccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCC
Q 035761 49 VGHLTQLTTLAIASNRMNGSILL------GIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLG 122 (560)
Q Consensus 49 ~~~l~~L~~L~L~~n~i~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 122 (560)
+....+++.++++.|.+.+..+. .|..+++|++|+|++|.+++ +| .+..+++|+.|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44456677777777777655554 56666666666666666664 44 5666666666666666666 4455555
Q ss_pred CCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccc-hhhccccccceeeccccccCCcCc
Q 035761 123 HLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIP-SQIGKLQELYYLDLSGNFINGKIP 190 (560)
Q Consensus 123 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~ 190 (560)
.+++|+.|++++|++++. | .+..+++|+.|++++|++++..+ ..+..+++|++|++++|++.+..|
T Consensus 91 ~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 91 VADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cCCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 556666666666666642 2 45555666666666666653222 345556666666666666554433
No 391
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.61 E-value=2.5e-17 Score=177.00 Aligned_cols=221 Identities=10% Similarity=0.104 Sum_probs=123.5
Q ss_pred CCCCCEEEccCCcCccc----CCCCCCCcCCCCEEEccCCcce----ecCCccccCCCCCCeeeccccccccccccccCC
Q 035761 4 LRNLVHLDLSDNHFMGH----IPPTLGRLSELKILNLSLNSLV----GNIPSNVGHLTQLTTLAIASNRMNGSILLGIGS 75 (560)
Q Consensus 4 l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~i~----~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 75 (560)
+++|++|+|++|.+++. ++..+..+++|++|+|++|.++ ..++..+.++++|++|+|++|.+.+ .+..+.+
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 45566666666655433 1122334555666666666554 2233334455666666666665553 3455555
Q ss_pred CCCCCEEEeecCccC---ccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCC-ccCcCCCCC
Q 035761 76 LKVLQVLDLSRNEIG---GSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIP-PELMNCSKL 151 (560)
Q Consensus 76 l~~L~~L~l~~n~l~---~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L 151 (560)
+++|++|+++.+... ...+..+..+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 566666666543222 122334556666777776665433 456666677777777777777653222 234667777
Q ss_pred cEEEccCcccccccchhhccccccceeeccc-----------cccCCcCc-cccCCCceeeEEEccCCccccccCcc---
Q 035761 152 RILKLGNNLLSGSIPSQIGKLQELYYLDLSG-----------NFINGKIP-SQLGEFSCIDTVDLSMNNLSGGIPVF--- 216 (560)
Q Consensus 152 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-----------n~l~~~~~-~~~~~~~~L~~l~l~~n~l~~~~~~~--- 216 (560)
+.|+++++......+..+..+++|++|++++ |.+++... .....+++|+.|+++.|.+++..+..
T Consensus 321 ~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~ 400 (592)
T 3ogk_B 321 EVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGT 400 (592)
T ss_dssp CEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHH
T ss_pred CEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHh
Confidence 7777773322223334445677777777773 45543322 22334677777777777777654432
Q ss_pred -cccCCCCcCC
Q 035761 217 -VRKVPHLDVS 226 (560)
Q Consensus 217 -~~~l~~l~l~ 226 (560)
+++++.|+++
T Consensus 401 ~~~~L~~L~l~ 411 (592)
T 3ogk_B 401 YLKNLCDFRLV 411 (592)
T ss_dssp HCCSCCEEEEE
T ss_pred hCCCCcEEEEe
Confidence 4557777775
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.59 E-value=6.8e-15 Score=130.51 Aligned_cols=106 Identities=23% Similarity=0.245 Sum_probs=68.8
Q ss_pred CCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccC
Q 035761 31 LKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQ 110 (560)
Q Consensus 31 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 110 (560)
.++|++++|.++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 455666666665 3444332 5666666666666666666666666677777777777665555666777777777777
Q ss_pred CCccCCCCccCCCCCCCcEEECcCCcCcC
Q 035761 111 NKLVGPIPSSLGHLTQLTTLNMYNNKLDG 139 (560)
Q Consensus 111 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 139 (560)
|+|++..+..|.++++|+.|+|++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 77775555567777777777777777663
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.57 E-value=1.2e-14 Score=129.47 Aligned_cols=104 Identities=23% Similarity=0.291 Sum_probs=72.7
Q ss_pred CEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCC
Q 035761 32 KILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQN 111 (560)
Q Consensus 32 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 111 (560)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|+++.+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56677777665 4454443 66777777777777666667777777777777777777655556677777777777777
Q ss_pred CccCCCCccCCCCCCCcEEECcCCcCc
Q 035761 112 KLVGPIPSSLGHLTQLTTLNMYNNKLD 138 (560)
Q Consensus 112 ~l~~~~~~~~~~l~~L~~L~l~~n~l~ 138 (560)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 777655556777777777777777776
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=8.7e-15 Score=129.83 Aligned_cols=104 Identities=23% Similarity=0.256 Sum_probs=50.3
Q ss_pred CEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCc
Q 035761 80 QVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 159 (560)
+.|++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455555555552 333331 44555555555555444445555555555555555555444444444555555555555
Q ss_pred ccccccchhhccccccceeeccccccC
Q 035761 160 LLSGSIPSQIGKLQELYYLDLSGNFIN 186 (560)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~L~l~~n~l~ 186 (560)
+|++..+..|..+++|++|+|++|++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 554433334444444444444444443
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=2.4e-14 Score=127.37 Aligned_cols=106 Identities=28% Similarity=0.264 Sum_probs=85.6
Q ss_pred CCeeeccccccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcC
Q 035761 55 LTTLAIASNRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYN 134 (560)
Q Consensus 55 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 134 (560)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|+++.+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 367888888887 4454443 7888888888888877788888888888888888888876666778888888888888
Q ss_pred CcCcCCCCccCcCCCCCcEEEccCccccc
Q 035761 135 NKLDGPIPPELMNCSKLRILKLGNNLLSG 163 (560)
Q Consensus 135 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 163 (560)
|+|++..+..|..+++|+.|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 88887666668888888888888888873
No 396
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.51 E-value=1.5e-16 Score=170.99 Aligned_cols=204 Identities=14% Similarity=0.092 Sum_probs=142.0
Q ss_pred CCCcCCCCEEEccCCcceecC-CccccCCCCCCeeeccccccccc-cccccCCCCCCCEEEeec---------CccCccC
Q 035761 25 LGRLSELKILNLSLNSLVGNI-PSNVGHLTQLTTLAIASNRMNGS-ILLGIGSLKVLQVLDLSR---------NEIGGSI 93 (560)
Q Consensus 25 ~~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~l~~---------n~l~~~~ 93 (560)
+..+++|++|+|++|.++... +..+.++++|+.|++++| +... .+.....+++|++|++++ |.++...
T Consensus 285 ~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~ 363 (594)
T 2p1m_B 285 YSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQG 363 (594)
T ss_dssp HHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHH
T ss_pred HHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHH
Confidence 346788999999999876432 233567889999999988 4422 222333578899998843 4454322
Q ss_pred CCCc-CCCCCccEEEccCCCccCCCCccCC-CCCCCcEEECc--C----CcCcCCCC-----ccCcCCCCCcEEEccCcc
Q 035761 94 PSTL-GHLKWLRSVDLSQNKLVGPIPSSLG-HLTQLTTLNMY--N----NKLDGPIP-----PELMNCSKLRILKLGNNL 160 (560)
Q Consensus 94 ~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~--~----n~l~~~~~-----~~~~~l~~L~~L~l~~n~ 160 (560)
...+ ..+++|+.|+++.|.+++.....+. .+++|+.|+++ + |.+++... ..+..+++|+.|++++ .
T Consensus 364 l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~ 442 (594)
T 2p1m_B 364 LVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-L 442 (594)
T ss_dssp HHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-S
T ss_pred HHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-c
Confidence 2222 2478899998888888754444444 57899999998 4 55553211 1256788999999977 6
Q ss_pred cccccchhhcc-ccccceeeccccccCCcCcccc-CCCceeeEEEccCCccccccCc----ccccCCCCcCCCCCC
Q 035761 161 LSGSIPSQIGK-LQELYYLDLSGNFINGKIPSQL-GEFSCIDTVDLSMNNLSGGIPV----FVRKVPHLDVSGNQF 230 (560)
Q Consensus 161 l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~-~~~~~L~~l~l~~n~l~~~~~~----~~~~l~~l~l~~n~~ 230 (560)
+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|++++.... .+++++.|++++|++
T Consensus 443 l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 443 LTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred ccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 76665666655 8889999999999876655554 5688999999999998654332 357888899998875
No 397
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.51 E-value=1.2e-16 Score=171.76 Aligned_cols=220 Identities=14% Similarity=0.088 Sum_probs=158.7
Q ss_pred CCCCCCEEEccCCcCcccC-CCCCCCcCCCCEEEccCCcceec-CCccccCCCCCCeeecc---------cccccccccc
Q 035761 3 RLRNLVHLDLSDNHFMGHI-PPTLGRLSELKILNLSLNSLVGN-IPSNVGHLTQLTTLAIA---------SNRMNGSILL 71 (560)
Q Consensus 3 ~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~---------~n~i~~~~~~ 71 (560)
.+++|++|+|++|.+++.. ...+..+++|++|++++| +... .+.....+++|++|+|+ .|.++.....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 3579999999999987432 223568899999999998 5422 22333468999999993 4566543333
Q ss_pred ccC-CCCCCCEEEeecCccCccCCCCcC-CCCCccEEEcc--C----CCccCCCC-----ccCCCCCCCcEEECcCCcCc
Q 035761 72 GIG-SLKVLQVLDLSRNEIGGSIPSTLG-HLKWLRSVDLS--Q----NKLVGPIP-----SSLGHLTQLTTLNMYNNKLD 138 (560)
Q Consensus 72 ~~~-~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~--~----n~l~~~~~-----~~~~~l~~L~~L~l~~n~l~ 138 (560)
.+. ++++|++|.++.|.++......+. .+++|+.|+|+ + |.++.... ..+..+++|+.|+|++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 333 489999999999999865444454 58999999999 4 56652211 2256789999999987 565
Q ss_pred CCCCccCcC-CCCCcEEEccCcccccccchhh-ccccccceeeccccccCCcCcc-ccCCCceeeEEEccCCccccccCc
Q 035761 139 GPIPPELMN-CSKLRILKLGNNLLSGSIPSQI-GKLQELYYLDLSGNFINGKIPS-QLGEFSCIDTVDLSMNNLSGGIPV 215 (560)
Q Consensus 139 ~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~-~~~~~~~L~~l~l~~n~l~~~~~~ 215 (560)
+..+..+.. +++|+.|++++|.+++..+..+ ..+++|++|+|++|++++.... ....+++|+.|++++|+++.....
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 524 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACK 524 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHH
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHH
Confidence 444444554 8999999999999987666555 6799999999999999655444 445689999999999999654433
Q ss_pred cc-ccCCCCc
Q 035761 216 FV-RKVPHLD 224 (560)
Q Consensus 216 ~~-~~l~~l~ 224 (560)
.+ ..++.+.
T Consensus 525 ~l~~~lp~l~ 534 (594)
T 2p1m_B 525 LLGQKMPKLN 534 (594)
T ss_dssp HHHHHCTTEE
T ss_pred HHHHhCCCCE
Confidence 33 3445443
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.48 E-value=2.1e-16 Score=158.37 Aligned_cols=184 Identities=20% Similarity=0.162 Sum_probs=115.8
Q ss_pred cCCCCEEEccCCcceecCCccccC-----CCCCCeeecccccccccccccc-CCCCCCCEEEeecCccCccCCCCc----
Q 035761 28 LSELKILNLSLNSLVGNIPSNVGH-----LTQLTTLAIASNRMNGSILLGI-GSLKVLQVLDLSRNEIGGSIPSTL---- 97 (560)
Q Consensus 28 l~~L~~L~L~~N~i~~~~~~~~~~-----l~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~---- 97 (560)
+++|++|+|++|.|+......+.. .++|++|+|++|.++......+ ..+++|++|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 356777777777776433333322 2577777777777764333222 235577888888887764332222
Q ss_pred -CCCCCccEEEccCCCccCC----CCccCCCCCCCcEEECcCCcCcCC----CCccCcCCCCCcEEEccCccccccc---
Q 035761 98 -GHLKWLRSVDLSQNKLVGP----IPSSLGHLTQLTTLNMYNNKLDGP----IPPELMNCSKLRILKLGNNLLSGSI--- 165 (560)
Q Consensus 98 -~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~--- 165 (560)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|++..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 3456788888888887632 334446678888888888887742 2445667788899999999887533
Q ss_pred -chhhccccccceeeccccccCCcCccccCCC---c--eeeEEE--ccCCcccc
Q 035761 166 -PSQIGKLQELYYLDLSGNFINGKIPSQLGEF---S--CIDTVD--LSMNNLSG 211 (560)
Q Consensus 166 -~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~---~--~L~~l~--l~~n~l~~ 211 (560)
+..+...++|++|+|++|+|+......+..+ . .|+.+. +..|.++.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~~ 284 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVSE 284 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccCH
Confidence 3445567889999999998876554444332 2 167777 67777664
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.48 E-value=2.3e-16 Score=158.10 Aligned_cols=166 Identities=22% Similarity=0.204 Sum_probs=126.5
Q ss_pred CCCCCeeecccccccccccccc----C-CCCCCCEEEeecCccCccCCCCc-CCCCCccEEEccCCCccCCCCccC----
Q 035761 52 LTQLTTLAIASNRMNGSILLGI----G-SLKVLQVLDLSRNEIGGSIPSTL-GHLKWLRSVDLSQNKLVGPIPSSL---- 121 (560)
Q Consensus 52 l~~L~~L~L~~n~i~~~~~~~~----~-~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~---- 121 (560)
+++|+.|+|++|.++......+ . ..++|++|+|++|.|+......+ ..+++|+.|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4689999999999986443333 2 23799999999999975333333 346789999999999974433333
Q ss_pred -CCCCCCcEEECcCCcCcCC----CCccCcCCCCCcEEEccCccccccc----chhhccccccceeeccccccCCcCc--
Q 035761 122 -GHLTQLTTLNMYNNKLDGP----IPPELMNCSKLRILKLGNNLLSGSI----PSQIGKLQELYYLDLSGNFINGKIP-- 190 (560)
Q Consensus 122 -~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~-- 190 (560)
...++|+.|+|++|.|+.. ++..+..+++|++|+|++|.|++.. +..+...++|++|+|++|.|+....
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 3568999999999999742 3345577899999999999998643 5667788899999999999986433
Q ss_pred --cccCCCceeeEEEccCCccccccCccc
Q 035761 191 --SQLGEFSCIDTVDLSMNNLSGGIPVFV 217 (560)
Q Consensus 191 --~~~~~~~~L~~l~l~~n~l~~~~~~~~ 217 (560)
..+...++|+.|+|++|+|+......+
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 344567899999999999987655544
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=6e-13 Score=132.63 Aligned_cols=103 Identities=23% Similarity=0.202 Sum_probs=66.4
Q ss_pred EEEeecC-ccCccCCCCcCCCCCccEEEccC-CCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccC
Q 035761 81 VLDLSRN-EIGGSIPSTLGHLKWLRSVDLSQ-NKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGN 158 (560)
Q Consensus 81 ~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 158 (560)
.++++++ +|+ .+|. +..+++|+.|+|++ |.|+++.+..|.++++|+.|+|++|+|+++.|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 666 3555 66666677777764 666665556666677777777777776666666666666666666666
Q ss_pred cccccccchhhccccccceeeccccccC
Q 035761 159 NLLSGSIPSQIGKLQELYYLDLSGNFIN 186 (560)
Q Consensus 159 n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 186 (560)
|+|++..+..|..++ |+.|+|++|++.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 666655555555444 666666666665
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=7.7e-13 Score=131.86 Aligned_cols=102 Identities=21% Similarity=0.216 Sum_probs=57.8
Q ss_pred EEccCC-cceecCCccccCCCCCCeeeccc-cccccccccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCC
Q 035761 34 LNLSLN-SLVGNIPSNVGHLTQLTTLAIAS-NRMNGSILLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQN 111 (560)
Q Consensus 34 L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 111 (560)
++++++ +++ .+|. +..+++|+.|+|++ |+|+++.+..|.++++|++|+|++|+|+++.|..|.++++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455554 555 3444 55555555555553 5555555555555666666666666666555555566666666666666
Q ss_pred CccCCCCccCCCCCCCcEEECcCCcCc
Q 035761 112 KLVGPIPSSLGHLTQLTTLNMYNNKLD 138 (560)
Q Consensus 112 ~l~~~~~~~~~~l~~L~~L~l~~n~l~ 138 (560)
+|+++.+..|..++ |+.|+|++|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66644444444444 666666666655
No 402
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.31 E-value=1e-11 Score=118.43 Aligned_cols=146 Identities=13% Similarity=0.057 Sum_probs=112.8
Q ss_pred HHhcCCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CCCcceeeeEEEeCCEEEE
Q 035761 312 EATEDFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIR-HRNIVKLYGFCLHEKCMFL 390 (560)
Q Consensus 312 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 390 (560)
..-+.|......+.|+.+.||++... ++.+++|....... .....+.+|+++++.+. +..+.++++++...+..++
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 34456877888888888999999864 68899999864321 11235778999999884 6778899999999899999
Q ss_pred EEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------
Q 035761 391 IYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHH----------------------------------- 435 (560)
Q Consensus 391 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------------------------------- 435 (560)
||||++|.++.+.+.. ..+...++.+++++++.||+.
T Consensus 88 v~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 9999999999776421 122347889999999999981
Q ss_pred ---------------------CCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 436 ---------------------CTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 436 ---------------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
..+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 013589999999999998765567999997754
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.22 E-value=1.5e-10 Score=117.34 Aligned_cols=106 Identities=11% Similarity=0.192 Sum_probs=59.0
Q ss_pred ccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCce
Q 035761 119 SSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSC 198 (560)
Q Consensus 119 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 198 (560)
.+|.++..|+.+.+..+..+ +...+|.++++|+.+.+. +.++.+....|.++.+|+.++|..+ ++.+....|..+.+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 35666677777777655433 444566666666666664 3344455556666666666666543 44445556666666
Q ss_pred eeEEEccCCccccccCccc---ccCCCCcCCCC
Q 035761 199 IDTVDLSMNNLSGGIPVFV---RKVPHLDVSGN 228 (560)
Q Consensus 199 L~~l~l~~n~l~~~~~~~~---~~l~~l~l~~n 228 (560)
|+.+.+..+ ++......+ .+|+.+++.++
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 666666433 333222233 34555555554
No 404
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.20 E-value=3.4e-11 Score=114.62 Aligned_cols=137 Identities=19% Similarity=0.127 Sum_probs=100.3
Q ss_pred CCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCC--cceeeeEEEeCCEEEEEEe
Q 035761 316 DFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRN--IVKLYGFCLHEKCMFLIYE 393 (560)
Q Consensus 316 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e 393 (560)
.+.+....+.|..+.||++...+|+.+++|...... ...+.+|+++++.+.+.+ +.+++++...++..++|||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 344433334566699999988778889999876431 134678999999885444 5568888888778899999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHC------------------------------------- 436 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------- 436 (560)
|++|.++. ... .+ ...++.++++.++.||+..
T Consensus 96 ~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 96 EVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp CCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred ecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 99998883 221 12 2357788888888888641
Q ss_pred ------------------CCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 437 ------------------TPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 437 ------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
.+.++|+|++|.||+++++..+.|+|||.+..
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776667999998754
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.15 E-value=4.1e-12 Score=126.16 Aligned_cols=152 Identities=16% Similarity=0.229 Sum_probs=78.3
Q ss_pred CCCCCCCEEEeecCc-cCccCCCCcCCCCCccEEEccCCCccCCCCccCC--CCCCCcEEECcC--CcCcCC-----CCc
Q 035761 74 GSLKVLQVLDLSRNE-IGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLG--HLTQLTTLNMYN--NKLDGP-----IPP 143 (560)
Q Consensus 74 ~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~--n~l~~~-----~~~ 143 (560)
..+++|+.|+|++|. +. ++. + .+++|+.|+|..|.+.......+. .+++|+.|+|+. |...+. +..
T Consensus 169 ~~~P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~ 244 (362)
T 2ra8_A 169 DAMPLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP 244 (362)
T ss_dssp HTCTTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG
T ss_pred hcCCCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH
Confidence 444555555555552 21 121 2 255566666655555422111221 455666665532 111100 001
Q ss_pred cC--cCCCCCcEEEccCcccccccchhhc---cccccceeeccccccCCcC----ccccCCCceeeEEEccCCccccccC
Q 035761 144 EL--MNCSKLRILKLGNNLLSGSIPSQIG---KLQELYYLDLSGNFINGKI----PSQLGEFSCIDTVDLSMNNLSGGIP 214 (560)
Q Consensus 144 ~~--~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~l~~n~l~~~~----~~~~~~~~~L~~l~l~~n~l~~~~~ 214 (560)
.+ ..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.+.+.. +..+..+++|+.|++++|.++...-
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~ 324 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMK 324 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHH
Confidence 12 2467777777777777643333332 4677778888777776532 2233445777888888777775544
Q ss_pred ccccc-C-CCCcCCCCC
Q 035761 215 VFVRK-V-PHLDVSGNQ 229 (560)
Q Consensus 215 ~~~~~-l-~~l~l~~n~ 229 (560)
..+.. + ..++++.++
T Consensus 325 ~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 325 KELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHCCSEEECCSBC
T ss_pred HHHHHHcCCEEEecCCc
Confidence 43432 2 345666655
No 406
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.10 E-value=1.9e-09 Score=109.13 Aligned_cols=196 Identities=13% Similarity=0.026 Sum_probs=102.0
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|.++++|+.+.+.++. +.+...+|.++.+|+.+++..| ++.+...+|.++..|+.+.+..+... + ...+....+|+
T Consensus 158 F~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i-~~~~~~~~~l~ 233 (394)
T 4fs7_A 158 FATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-L-GDFALSKTGVK 233 (394)
T ss_dssp TTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-E-CTTTTTTCCCC
T ss_pred hcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-e-ehhhcccCCCc
Confidence 3445566666665443 3355556666666666666555 44455556666666666665554322 1 12222234455
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcc
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNL 160 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 160 (560)
.+.+..+ ++.+....|.++..|+.+.+..+..+ +....|..+..++.+.+..+.+. ...|..+.+|+.+.+.++
T Consensus 234 ~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~- 307 (394)
T 4fs7_A 234 NIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS- 307 (394)
T ss_dssp EEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-
T ss_pred eEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-
Confidence 5554332 22234445566666666666655443 44455555555555555444322 234555556666665543
Q ss_pred cccccchhhccccccceeeccccccCCcCccccCCCceeeEEEccCC
Q 035761 161 LSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFSCIDTVDLSMN 207 (560)
Q Consensus 161 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n 207 (560)
++.+...+|.++.+|+.++|..+ ++.....+|.++.+|+.+++..|
T Consensus 308 i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 308 VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 44344555556666666666432 44444555566666666655444
No 407
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.08 E-value=3.1e-09 Score=107.59 Aligned_cols=220 Identities=10% Similarity=0.094 Sum_probs=133.4
Q ss_pred CCCC-CCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCc---ceecCCccccCCCCCCeeeccccccccccccccCCCC
Q 035761 2 GRLR-NLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNS---LVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLK 77 (560)
Q Consensus 2 ~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~---i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 77 (560)
.+.+ .|+.+.+-. .++.+-..+|.++.+|+.+.+..|. ++.+-..+|.++.+|+.+.+..+ ++.+....|.++.
T Consensus 60 ~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~ 137 (394)
T 4gt6_A 60 CNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCE 137 (394)
T ss_dssp TTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCT
T ss_pred cCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhc
Confidence 3443 478888865 4666777888888888888887663 66666677777777777777654 4445566666777
Q ss_pred CCCEEEeecCccCccCCCCcCCCCCccEEEccCCCcc---------------------CCCCccCCCCCCCcEEECcCCc
Q 035761 78 VLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLV---------------------GPIPSSLGHLTQLTTLNMYNNK 136 (560)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---------------------~~~~~~~~~l~~L~~L~l~~n~ 136 (560)
+|+.+.+..+ +..+....|..+..|+.+.+.++--. .+...+|.++.+|.......+.
T Consensus 138 ~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~ 216 (394)
T 4gt6_A 138 ELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITSDSES 216 (394)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSS
T ss_pred ccccccccce-eeeecccceecccccccccccceeeEeccccccccceeEEEECCcccccccchhhhccccceecccccc
Confidence 7777776543 23244445555555555555443111 0222333444444433322111
Q ss_pred ------------------------------------CcCCCCccCcCCCCCcEEEccCcccccccchhhccccccceeec
Q 035761 137 ------------------------------------LDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELYYLDL 180 (560)
Q Consensus 137 ------------------------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 180 (560)
++.+...+|.++.+|+.+.+.++..+ +....|.++++|+.+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l 295 (394)
T 4gt6_A 217 YPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEF 295 (394)
T ss_dssp SCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEEC
T ss_pred cccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccccC
Confidence 11122345777888888888776554 66777888888888888
Q ss_pred cccccCCcCccccCCCceeeEEEccCCccccccCccc---ccCCCCcCCC
Q 035761 181 SGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV---RKVPHLDVSG 227 (560)
Q Consensus 181 ~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~---~~l~~l~l~~ 227 (560)
. +.++......|..+.+|+.+++..+ ++......+ .+|+.+.+..
T Consensus 296 ~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~ 343 (394)
T 4gt6_A 296 S-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPS 343 (394)
T ss_dssp C-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECT
T ss_pred C-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECc
Confidence 5 4566566678888888888888654 443333333 4556666643
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.07 E-value=2.7e-11 Score=120.28 Aligned_cols=181 Identities=11% Similarity=0.146 Sum_probs=117.5
Q ss_pred CCCCCCcCCCCEEEccCCcce---------ecCCccccCCCCCCeeeccccc-cccccccccCCCCCCCEEEeecCccCc
Q 035761 22 PPTLGRLSELKILNLSLNSLV---------GNIPSNVGHLTQLTTLAIASNR-MNGSILLGIGSLKVLQVLDLSRNEIGG 91 (560)
Q Consensus 22 ~~~~~~l~~L~~L~L~~N~i~---------~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~l~~n~l~~ 91 (560)
..+...+++|+.|.+..+... +.++..+..+++|+.|+|++|. +. . +. +. +++|+.|+|..|.++.
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~-l-~~-~~-~~~L~~L~L~~~~l~~ 207 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS-I-GK-KP-RPNLKSLEIISGGLPD 207 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB-C-CS-CB-CTTCSEEEEECSBCCH
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce-e-cc-cc-CCCCcEEEEecCCCCh
Confidence 344567788888888665321 1233456778899999998873 32 2 22 33 7889999998888774
Q ss_pred cCCCCcC--CCCCccEEEccC--CCccCC-----CCccC--CCCCCCcEEECcCCcCcCCCCccC---cCCCCCcEEEcc
Q 035761 92 SIPSTLG--HLKWLRSVDLSQ--NKLVGP-----IPSSL--GHLTQLTTLNMYNNKLDGPIPPEL---MNCSKLRILKLG 157 (560)
Q Consensus 92 ~~~~~~~--~l~~L~~L~l~~--n~l~~~-----~~~~~--~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~l~ 157 (560)
.....+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+..+ ..+++|+.|+|+
T Consensus 208 ~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs 287 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDIS 287 (362)
T ss_dssp HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECC
T ss_pred HHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECC
Confidence 3323333 678899998863 221111 11122 247899999999998874322222 247899999999
Q ss_pred Cccccccc----chhhccccccceeeccccccCCcCccccCC-CceeeEEEccCCc
Q 035761 158 NNLLSGSI----PSQIGKLQELYYLDLSGNFINGKIPSQLGE-FSCIDTVDLSMNN 208 (560)
Q Consensus 158 ~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~~L~~l~l~~n~ 208 (560)
.|.+++.. +..+..+++|+.|+|++|.|+...-..+.. + ...+++++|+
T Consensus 288 ~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 288 AGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp SSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 99998643 334456789999999999887554444433 2 2457888876
No 409
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.06 E-value=3.9e-10 Score=112.74 Aligned_cols=142 Identities=18% Similarity=0.310 Sum_probs=105.3
Q ss_pred cceeeccCCeeEEEEEeCCCcEEEEEEcc--chhhhhhhHHHHHHHHHHHhccC--CCCcceeeeEEEeC---CEEEEEE
Q 035761 320 KYCIGTGGYGSVYRARLPSGKVVALKKLH--RLETELASLESFQNEARLLSQIR--HRNIVKLYGFCLHE---KCMFLIY 392 (560)
Q Consensus 320 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 392 (560)
.+.++.|.++.||+....+ ..+++|+.. .... ......+.+|..+++.+. +..+.++++++.+. +..++||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4568899999999998754 678888775 3221 112345778999999986 45678888888776 4578999
Q ss_pred eccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 035761 393 EYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHC------------------------------------ 436 (560)
Q Consensus 393 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 436 (560)
||+++..+.+... ..++..++..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 121 EFVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp ECCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9999987743211 12778888999999999999999730
Q ss_pred -------------------CCCeEEeCCCCCCeEeCCCCc--EEEeeeccccc
Q 035761 437 -------------------TPPILHRDISSNNILLNSEFE--AFVADFGIARL 468 (560)
Q Consensus 437 -------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~ 468 (560)
.+.++|||+++.||+++.++. +.|.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 58999998875
No 410
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.06 E-value=1.5e-09 Score=109.86 Aligned_cols=152 Identities=10% Similarity=0.036 Sum_probs=85.1
Q ss_pred CCCCCCCCEEEccCCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeeccccccccccccccCCCCCCC
Q 035761 1 MGRLRNLVHLDLSDNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSILLGIGSLKVLQ 80 (560)
Q Consensus 1 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 80 (560)
|.++++|+++.|.. .++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +..+...+|.+...++
T Consensus 67 F~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~ 143 (394)
T 4fs7_A 67 FQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKE 143 (394)
T ss_dssp TTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSE
T ss_pred hhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccc
Confidence 45667778888864 466666777888888888888654 55566677777777777766544 2223334444433222
Q ss_pred EEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCc
Q 035761 81 VLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNN 159 (560)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 159 (560)
.... +.+......+|.++++|+.+.+.++..+ +....|.++++|+.+.+..| ++.+....|.++..|+.+.+..+
T Consensus 144 ~~~~--~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~ 218 (394)
T 4fs7_A 144 ITIP--EGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNS 218 (394)
T ss_dssp EECC--TTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTT
T ss_pred cccC--ccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCC
Confidence 1111 1122233445666666666666554332 44555666666666666554 33333445555555555555444
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.02 E-value=1.3e-10 Score=113.36 Aligned_cols=186 Identities=20% Similarity=0.191 Sum_probs=121.7
Q ss_pred cceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CCC--cceeeeEEEeCC---EEEEEEe
Q 035761 320 KYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIR-HRN--IVKLYGFCLHEK---CMFLIYE 393 (560)
Q Consensus 320 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e 393 (560)
.+.++.|.+..||+.. ..+++|..... .....+.+|.++++.+. +.. +.++++...... ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 3458999999999863 46888886532 22356788999998873 333 334444332222 3488999
Q ss_pred ccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 035761 394 YMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHH-------------------------------------- 435 (560)
Q Consensus 394 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------------------------------------- 435 (560)
+++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 97 ~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 97 KIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred ccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 9999887643321 267788888899999999888861
Q ss_pred -----------------CCCCeEEeCCCCCCeEeCC--CCcEEEeeeccccccCCCCC----------Cc----eeeccc
Q 035761 436 -----------------CTPPILHRDISSNNILLNS--EFEAFVADFGIARLLNYDSS----------NR----TLLAGT 482 (560)
Q Consensus 436 -----------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~~~~----------~~----~~~~g~ 482 (560)
..+.++|+|++|.||++++ ...+.++||+.+....+... .. ......
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1245899999999999998 45578999998865422100 00 000011
Q ss_pred cCccC-ccccccCccCcchhHHHHHHHHHHHHhCCCCCC
Q 035761 483 YGSIA-PELAYTMVVTEKYDVYSFGVVALEVLMGKHPGE 520 (560)
Q Consensus 483 ~~~~a-PE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~ 520 (560)
++... |+..... ....+.|++|.++|++.+|+.||.
T Consensus 252 Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 252 YKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11222 2221111 223689999999999999998875
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.89 E-value=4.3e-08 Score=98.55 Aligned_cols=127 Identities=12% Similarity=0.086 Sum_probs=85.8
Q ss_pred cCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcccccccchhhccccccc
Q 035761 97 LGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLLSGSIPSQIGKLQELY 176 (560)
Q Consensus 97 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 176 (560)
+....+|+.+.+..+ ++.+....|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++......|.++.+|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 344455555555544 23345567778888888888766 55466677888888888888654 5546667788888888
Q ss_pred eeeccccccCCcCccccCCCceeeEEEccCCccccccCccc---ccCCCCcCCC
Q 035761 177 YLDLSGNFINGKIPSQLGEFSCIDTVDLSMNNLSGGIPVFV---RKVPHLDVSG 227 (560)
Q Consensus 177 ~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~l~~~~~~~~---~~l~~l~l~~ 227 (560)
.+.+.++.++......|.++.+|+.+.+..+ ++......+ .+|+.+.+..
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 8888888887677778888888888888654 443333333 3455555543
No 413
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.80 E-value=2e-08 Score=98.48 Aligned_cols=185 Identities=18% Similarity=0.148 Sum_probs=119.1
Q ss_pred CCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCC----CCcceeeeEEEeCCEEEEE
Q 035761 316 DFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRH----RNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 316 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lv 391 (560)
.....+.++.|....||+. |+.+++|+..... ....+.+|.++++.+.+ ..+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~----~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS----VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH----HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH----HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4556678999999999998 6678888765422 12357889999888865 223444444 456899
Q ss_pred EeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 035761 392 YEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHC----------------------------------- 436 (560)
Q Consensus 392 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------- 436 (560)
|||++|.++...... .++..++..++.++++.++.||+..
T Consensus 106 me~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 106 MKYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp EECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EeecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 999999888633211 1677777788888888888888531
Q ss_pred -------------------------CCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCCCCceeeccccCccCcccc
Q 035761 437 -------------------------TPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELA 491 (560)
Q Consensus 437 -------------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~ 491 (560)
.+.++|+|++|.||+++++..+.|+||+.+....+................||..
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 260 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFG 260 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHHHSCCTTSCCHHHH
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHHHHhcccccCHHHH
Confidence 1235999999999999986667899999986543211111111011111233321
Q ss_pred c---cC-------ccCcchhHHHHHHHHHHHHhCCC
Q 035761 492 Y---TM-------VVTEKYDVYSFGVVALEVLMGKH 517 (560)
Q Consensus 492 ~---~~-------~~~~~~Dv~s~G~il~el~~g~~ 517 (560)
. .. ....+.+.|..-..+++++.|..
T Consensus 261 ~~~l~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 296 (320)
T 3r70_A 261 RKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYE 296 (320)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHTHHHHHHHSSCT
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 1 00 12245777865555888888753
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.72 E-value=9.1e-10 Score=98.65 Aligned_cols=116 Identities=17% Similarity=0.143 Sum_probs=82.9
Q ss_pred CCCCCcCCCCEEEccCC-ccee----cCCccccCCCCCCeeeccccccccc----cccccCCCCCCCEEEeecCccCcc-
Q 035761 23 PTLGRLSELKILNLSLN-SLVG----NIPSNVGHLTQLTTLAIASNRMNGS----ILLGIGSLKVLQVLDLSRNEIGGS- 92 (560)
Q Consensus 23 ~~~~~l~~L~~L~L~~N-~i~~----~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~l~~n~l~~~- 92 (560)
..+...++|++|+|++| .|.. .+...+...++|++|+|++|+|... +...+...++|++|+|++|.|+..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34566788888888888 7763 2345566678888888888888642 334455567888888888888842
Q ss_pred ---CCCCcCCCCCccEEEc--cCCCccCC----CCccCCCCCCCcEEECcCCcCc
Q 035761 93 ---IPSTLGHLKWLRSVDL--SQNKLVGP----IPSSLGHLTQLTTLNMYNNKLD 138 (560)
Q Consensus 93 ---~~~~~~~l~~L~~L~l--~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~ 138 (560)
+...+...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3456677788888888 77888633 3345556688999999988875
No 415
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.71 E-value=2e-07 Score=93.64 Aligned_cols=190 Identities=14% Similarity=0.079 Sum_probs=132.5
Q ss_pred CCCCCCCEEEccCCcCcc------------cCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeecccccccccc
Q 035761 2 GRLRNLVHLDLSDNHFMG------------HIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRMNGSI 69 (560)
Q Consensus 2 ~~l~~L~~L~L~~n~l~~------------~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 69 (560)
.+..+++.+.+..+.... .....+.....+..+.+..+... .....+....+|+.+.+..+ ++.+.
T Consensus 155 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~ 232 (379)
T 4h09_A 155 YKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLG 232 (379)
T ss_dssp TTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEEC
T ss_pred cccccccccccccccceeecccceecccccceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEc
Confidence 445666776666554321 12223445556666666554333 56677777888888888665 44466
Q ss_pred ccccCCCCCCCEEEeecCccCccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECcCCcCcCCCCccCcCCC
Q 035761 70 LLGIGSLKVLQVLDLSRNEIGGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCS 149 (560)
Q Consensus 70 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 149 (560)
...|.++..|+.+.+..+ ++.+....|.++.+|+.+.+..+ ++.+....|.++++|+.+.+.++.++.+...+|.++.
T Consensus 233 ~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~ 310 (379)
T 4h09_A 233 DGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCV 310 (379)
T ss_dssp TTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCT
T ss_pred cccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCC
Confidence 777888888888888765 66566777888888888888654 4446667788888888888888888766677888888
Q ss_pred CCcEEEccCcccccccchhhccccccceeeccccccCCcCccccCCCc
Q 035761 150 KLRILKLGNNLLSGSIPSQIGKLQELYYLDLSGNFINGKIPSQLGEFS 197 (560)
Q Consensus 150 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 197 (560)
+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.+++
T Consensus 311 ~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 311 KLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred CCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 8888888755 66566778888888888888654 5555566676654
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.68 E-value=1.6e-09 Score=97.04 Aligned_cols=121 Identities=12% Similarity=0.103 Sum_probs=95.2
Q ss_pred ecCCccccCCCCCCeeecccc-ccccc----cccccCCCCCCCEEEeecCccCcc----CCCCcCCCCCccEEEccCCCc
Q 035761 43 GNIPSNVGHLTQLTTLAIASN-RMNGS----ILLGIGSLKVLQVLDLSRNEIGGS----IPSTLGHLKWLRSVDLSQNKL 113 (560)
Q Consensus 43 ~~~~~~~~~l~~L~~L~L~~n-~i~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l 113 (560)
..+...+...++|++|+|++| .|... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 344566788899999999999 88742 455677789999999999999842 234456668899999999999
Q ss_pred cCC----CCccCCCCCCCcEEEC--cCCcCcCC----CCccCcCCCCCcEEEccCccccc
Q 035761 114 VGP----IPSSLGHLTQLTTLNM--YNNKLDGP----IPPELMNCSKLRILKLGNNLLSG 163 (560)
Q Consensus 114 ~~~----~~~~~~~l~~L~~L~l--~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~ 163 (560)
... +...+...++|++|+| ++|.|... +...+...++|+.|+|++|.+..
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 743 4566778899999999 88999843 33456677899999999999863
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.56 E-value=5.1e-09 Score=98.50 Aligned_cols=80 Identities=29% Similarity=0.331 Sum_probs=51.1
Q ss_pred CCCCCccEEEccCCCccCC--CCccCCCCCCCcEEECcCCcCcCCCCccCcCCC--CCcEEEccCcccccccc-------
Q 035761 98 GHLKWLRSVDLSQNKLVGP--IPSSLGHLTQLTTLNMYNNKLDGPIPPELMNCS--KLRILKLGNNLLSGSIP------- 166 (560)
Q Consensus 98 ~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~------- 166 (560)
.++++|+.|+|++|+|+++ ++..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+..|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 3456677777777776652 234455677777777777777654 2333333 77888888888775444
Q ss_pred hhhccccccceee
Q 035761 167 SQIGKLQELYYLD 179 (560)
Q Consensus 167 ~~~~~l~~L~~L~ 179 (560)
..+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 3466788888776
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.56 E-value=4.8e-07 Score=86.24 Aligned_cols=135 Identities=19% Similarity=0.159 Sum_probs=96.6
Q ss_pred eeeccCCe-eEEEEEeC-CCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CCCcceeeeEEEeCCEEEEEEeccCCC
Q 035761 322 CIGTGGYG-SVYRARLP-SGKVVALKKLHRLETELASLESFQNEARLLSQIR-HRNIVKLYGFCLHEKCMFLIYEYMEMG 398 (560)
Q Consensus 322 ~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 398 (560)
.+..|..| .||+.... ++..+++|+-.... ...+.+|...++.+. +--+.++++++.+.+..++|||++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~-----~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSV-----ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHH-----HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCC-----HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 35556665 68988764 45678889865432 345778999988874 444778889999999999999999998
Q ss_pred CHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 035761 399 SLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHC------------------------------------------ 436 (560)
Q Consensus 399 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------ 436 (560)
++.+..... ..+...++.++++.++-||...
T Consensus 106 ~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 106 TAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp EHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred cccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 877655432 1223345666666666666421
Q ss_pred -------------CCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 437 -------------TPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 437 -------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12379999999999999877677999998864
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.54 E-value=4.8e-09 Score=98.66 Aligned_cols=105 Identities=21% Similarity=0.211 Sum_probs=71.3
Q ss_pred ccCCCCCCe--eeccccccc---cccccccCCCCCCCEEEeecCccCcc--CCCCcCCCCCccEEEccCCCccCCCCccC
Q 035761 49 VGHLTQLTT--LAIASNRMN---GSILLGIGSLKVLQVLDLSRNEIGGS--IPSTLGHLKWLRSVDLSQNKLVGPIPSSL 121 (560)
Q Consensus 49 ~~~l~~L~~--L~L~~n~i~---~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 121 (560)
|...+.|.. ++++.|+.. ........++++|+.|+|++|+|+++ ++..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455555 667777443 22222335678888888888888863 345566788888888888888854 234
Q ss_pred CCCC--CCcEEECcCCcCcCCCCc-------cCcCCCCCcEEE
Q 035761 122 GHLT--QLTTLNMYNNKLDGPIPP-------ELMNCSKLRILK 155 (560)
Q Consensus 122 ~~l~--~L~~L~l~~n~l~~~~~~-------~~~~l~~L~~L~ 155 (560)
..+. +|++|+|++|.+.+..|. .+..+|+|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 888999999988865542 366788888886
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.45 E-value=1.6e-06 Score=84.18 Aligned_cols=137 Identities=18% Similarity=0.119 Sum_probs=94.0
Q ss_pred cceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCC---CcceeeeEEE-eCCEEEEEEecc
Q 035761 320 KYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHR---NIVKLYGFCL-HEKCMFLIYEYM 395 (560)
Q Consensus 320 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~ 395 (560)
.+.++.|....||+. |..+++|+.... .....+.+|.++++.+.+. .+.+.+.+.. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~----~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ----QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc----hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 355788988999988 566788875321 2235688999999998642 3556666664 345678999999
Q ss_pred CCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 035761 396 EMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHH---------------------------------------- 435 (560)
Q Consensus 396 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------------------------------------- 435 (560)
+|..+.+..-. .++..+...++.++++.|+.||+.
T Consensus 96 ~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 96 QGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp CSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred CCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 99887653211 134445555555555555555532
Q ss_pred -----------------CCCCeEEeCCCCCCeEeCC---CCcE-EEeeecccccc
Q 035761 436 -----------------CTPPILHRDISSNNILLNS---EFEA-FVADFGIARLL 469 (560)
Q Consensus 436 -----------------~~~~ivH~dlk~~Nill~~---~~~~-kl~Dfg~~~~~ 469 (560)
..+.++|+|++|.||+++. ++.+ .|+||+.+..-
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2335799999999999987 4554 79999988754
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.37 E-value=1.9e-06 Score=82.66 Aligned_cols=142 Identities=20% Similarity=0.186 Sum_probs=91.8
Q ss_pred ccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCC---CcceeeeEEEeCCEEEEEEecc
Q 035761 319 IKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHR---NIVKLYGFCLHEKCMFLIYEYM 395 (560)
Q Consensus 319 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~ 395 (560)
..+.++.|.++.||++...+|+.++||+..... ......+.+|++.++.+++. .+.+++++. ..++||||+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 356799999999999998889999999965321 11224688999999999765 467777653 258999999
Q ss_pred CCCCHHH-----------HhhcCCcc------------------cCCCHHHHHH---H-----------------HHHHH
Q 035761 396 EMGSLFC-----------ILRTDEEA------------------VGLDWTKRVN---I-----------------VKGMA 426 (560)
Q Consensus 396 ~~g~L~~-----------~l~~~~~~------------------~~l~~~~~~~---i-----------------~~~ia 426 (560)
+++.+.. .+|..... -.-+|.+... + ...+-
T Consensus 93 ~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~ 172 (288)
T 3d1u_A 93 DERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVE 172 (288)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9987421 12221100 0023433211 0 11111
Q ss_pred HHHHHHH----hcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 427 HALSYLH----HHCTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 427 ~~l~~LH----~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
+.++.+. ....+.++|+|+.+.||+++.+ .+.+.|| .+..
T Consensus 173 ~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~~ 216 (288)
T 3d1u_A 173 KVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAHG 216 (288)
T ss_dssp HHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCEE
T ss_pred HHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcCC
Confidence 2223332 2235689999999999999884 5889999 6643
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.30 E-value=4.2e-06 Score=83.14 Aligned_cols=144 Identities=12% Similarity=0.161 Sum_probs=90.1
Q ss_pred cccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCC--cceeeeEEEeC-CEEEEEEec
Q 035761 318 DIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRN--IVKLYGFCLHE-KCMFLIYEY 394 (560)
Q Consensus 318 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~ 394 (560)
...+.++.|....+|+... ++..+++|...... .+.+|..+++.+.... +.++++++... +..++||||
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~~-------~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~ 115 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCAD-------GFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRR 115 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCCH-------HHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEEC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCchh-------hHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEe
Confidence 3456688999999999886 57888999875321 4778888888886433 55677776654 568999999
Q ss_pred cCCCCHHHH------------------hhcCCcc--------------cCCCHHHHH---------------------HH
Q 035761 395 MEMGSLFCI------------------LRTDEEA--------------VGLDWTKRV---------------------NI 421 (560)
Q Consensus 395 ~~~g~L~~~------------------l~~~~~~--------------~~l~~~~~~---------------------~i 421 (560)
+++..+.+. ++..... ..-+|.+.. ..
T Consensus 116 l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~ 195 (362)
T 3ovc_A 116 AQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASV 195 (362)
T ss_dssp CCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHH
T ss_pred cCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 998655311 1111000 000111110 11
Q ss_pred HHHHHHHHHHHHhc-CCCCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 422 VKGMAHALSYLHHH-CTPPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 422 ~~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
...+....+++... ..+.++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 196 ~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 196 AQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 11222222333221 1246899999999999987777789999988753
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.18 E-value=3.7e-07 Score=79.57 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=14.4
Q ss_pred CCcEEEccCcc-cccccchhhccccccceeecccc
Q 035761 150 KLRILKLGNNL-LSGSIPSQIGKLQELYYLDLSGN 183 (560)
Q Consensus 150 ~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n 183 (560)
+|+.|+|++|. +++..-..+..+++|++|++++|
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESC
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCC
Confidence 34444444442 44333333444444444444444
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.17 E-value=4.7e-07 Score=78.86 Aligned_cols=86 Identities=8% Similarity=0.061 Sum_probs=66.9
Q ss_pred CCCcEEECcCCcCcCCCCccCcCCCCCcEEEccCcc-cccccchhhccc----cccceeeccccc-cCCcCccccCCCce
Q 035761 125 TQLTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNL-LSGSIPSQIGKL----QELYYLDLSGNF-INGKIPSQLGEFSC 198 (560)
Q Consensus 125 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l----~~L~~L~l~~n~-l~~~~~~~~~~~~~ 198 (560)
..|+.|++++|.|+..--..+..+++|+.|+|++|. +++..-..+..+ ++|++|+|++|. +++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777765444567788899999999985 776665666664 479999999985 88766667888999
Q ss_pred eeEEEccCCc-cc
Q 035761 199 IDTVDLSMNN-LS 210 (560)
Q Consensus 199 L~~l~l~~n~-l~ 210 (560)
|+.|++++++ ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999986 44
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.12 E-value=5.1e-06 Score=82.56 Aligned_cols=81 Identities=7% Similarity=0.001 Sum_probs=53.9
Q ss_pred cee-eccCCeeEEEEEeC-------CCcEEEEEEccchhh-hhhhHHHHHHHHHHHhccC-C--CCcceeeeEEEeC---
Q 035761 321 YCI-GTGGYGSVYRARLP-------SGKVVALKKLHRLET-ELASLESFQNEARLLSQIR-H--RNIVKLYGFCLHE--- 385 (560)
Q Consensus 321 ~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~--- 385 (560)
+.+ +.|....+|+.... +++.+++|....... .......+.+|..+++.+. + ..+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999998764 266788887654320 0001124667888888774 2 3567788877654
Q ss_pred CEEEEEEeccCCCCHH
Q 035761 386 KCMFLIYEYMEMGSLF 401 (560)
Q Consensus 386 ~~~~lv~e~~~~g~L~ 401 (560)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3468999999987654
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.01 E-value=3.5e-05 Score=75.87 Aligned_cols=141 Identities=19% Similarity=0.290 Sum_probs=79.0
Q ss_pred ceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhcc-----CCCCcceee-e--EEEeCCEEEEEE
Q 035761 321 YCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQI-----RHRNIVKLY-G--FCLHEKCMFLIY 392 (560)
Q Consensus 321 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lv~ 392 (560)
+.++.|..+.||+....+| .+++|+..... .....|..+++.+ ..|.++... | +....+..+++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 3456677889999987655 58899887522 1222344444443 234433311 1 223467789999
Q ss_pred eccCCCCHH--------------HHhhcCCc----c-------cCCCHHHH-----------------------------
Q 035761 393 EYMEMGSLF--------------CILRTDEE----A-------VGLDWTKR----------------------------- 418 (560)
Q Consensus 393 e~~~~g~L~--------------~~l~~~~~----~-------~~l~~~~~----------------------------- 418 (560)
+|++|..+. ..+|.... . ..-.|...
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986531 11111000 0 00123221
Q ss_pred --HHHHHHHHHHHHHHHh----------cCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 419 --VNIVKGMAHALSYLHH----------HCTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 419 --~~i~~~ia~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
..+..++.+++++|++ ...+.++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1112234446667763 1245899999999999998888899999998754
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.85 E-value=9.1e-05 Score=71.54 Aligned_cols=138 Identities=20% Similarity=0.209 Sum_probs=91.8
Q ss_pred cceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccC---CCCcceeeeEEEeCCEEEEEEeccC
Q 035761 320 KYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIR---HRNIVKLYGFCLHEKCMFLIYEYME 396 (560)
Q Consensus 320 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~ 396 (560)
.+.++.|.+..+|+... ++..+++|+.... ....+..|.+.++.+. ...+.++++++...+..++||||++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 45689999999999986 4678888987532 2346788988888873 3668889998888888999999999
Q ss_pred CCCHH-----------HHhhcCCc--cc-----------------CCCHHHHH---HHHHH----------------HHH
Q 035761 397 MGSLF-----------CILRTDEE--AV-----------------GLDWTKRV---NIVKG----------------MAH 427 (560)
Q Consensus 397 ~g~L~-----------~~l~~~~~--~~-----------------~l~~~~~~---~i~~~----------------ia~ 427 (560)
+..+. ..++.... .. .-+|.+.. ++..+ +..
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 87641 11222111 00 12455432 11111 111
Q ss_pred H-HHHHHh-cCCCCeEEeCCCCCCeEeCCCCcEEEeeec
Q 035761 428 A-LSYLHH-HCTPPILHRDISSNNILLNSEFEAFVADFG 464 (560)
Q Consensus 428 ~-l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 464 (560)
. .+.|.. ...|.+||+|+.+.|++++.++ +.|.|++
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 123321 2356899999999999999887 8899984
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.83 E-value=2.1e-06 Score=76.24 Aligned_cols=113 Identities=10% Similarity=0.099 Sum_probs=69.6
Q ss_pred CCcCCCCEEEccCC-ccee----cCCccccCCCCCCeeecccccccccc----ccccCCCCCCCEEEeecCccCcc----
Q 035761 26 GRLSELKILNLSLN-SLVG----NIPSNVGHLTQLTTLAIASNRMNGSI----LLGIGSLKVLQVLDLSRNEIGGS---- 92 (560)
Q Consensus 26 ~~l~~L~~L~L~~N-~i~~----~~~~~~~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~l~~n~l~~~---- 92 (560)
.+-+.|++|+|++| +|.. .+.+++.....|+.|+|++|+|.... ...+..-+.|++|+|+.|.|+..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34566777777774 6652 23445566677777777777776432 33344557788888888877732
Q ss_pred CCCCcCCCCCccEEEccCCCc---cC----CCCccCCCCCCCcEEECcCCcCc
Q 035761 93 IPSTLGHLKWLRSVDLSQNKL---VG----PIPSSLGHLTQLTTLNMYNNKLD 138 (560)
Q Consensus 93 ~~~~~~~l~~L~~L~l~~n~l---~~----~~~~~~~~l~~L~~L~l~~n~l~ 138 (560)
+...+..-+.|++|+|++|.. .. .+...+..-+.|+.|+++.|.+.
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 233455566788888876533 21 12334555677888888776543
No 429
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82 E-value=4.2e-05 Score=77.07 Aligned_cols=77 Identities=12% Similarity=0.131 Sum_probs=48.3
Q ss_pred cceeeccCCeeEEEEEeC-CCcEEEEEEccchhh---h--hhhHHHHHHHHHHHhccCC--CCc-ceeeeEEEeCCEEEE
Q 035761 320 KYCIGTGGYGSVYRARLP-SGKVVALKKLHRLET---E--LASLESFQNEARLLSQIRH--RNI-VKLYGFCLHEKCMFL 390 (560)
Q Consensus 320 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~--~~~~~~~~~e~~~l~~l~h--~ni-v~l~~~~~~~~~~~l 390 (560)
.+.+|.|.++.||++... +++.++||....... . ....+.+..|.++++.+.. +.. .+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 456899999999999754 468899997643211 0 0122356778888887732 333 345543 3444689
Q ss_pred EEeccCCC
Q 035761 391 IYEYMEMG 398 (560)
Q Consensus 391 v~e~~~~g 398 (560)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.72 E-value=3.9e-06 Score=74.52 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=87.6
Q ss_pred CCccccCCCCCCeeecccc-cccc----ccccccCCCCCCCEEEeecCccCccC----CCCcCCCCCccEEEccCCCccC
Q 035761 45 IPSNVGHLTQLTTLAIASN-RMNG----SILLGIGSLKVLQVLDLSRNEIGGSI----PSTLGHLKWLRSVDLSQNKLVG 115 (560)
Q Consensus 45 ~~~~~~~l~~L~~L~L~~n-~i~~----~~~~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~ 115 (560)
+...+.+-+.|+.|+|++| +|.. .+...+..-+.|+.|+|++|+|.... ...+..-+.|+.|+|++|.|..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3344567789999999986 8763 34566777889999999999998533 3344566899999999999973
Q ss_pred C----CCccCCCCCCCcEEECcCCcC---cC----CCCccCcCCCCCcEEEccCcccc
Q 035761 116 P----IPSSLGHLTQLTTLNMYNNKL---DG----PIPPELMNCSKLRILKLGNNLLS 162 (560)
Q Consensus 116 ~----~~~~~~~l~~L~~L~l~~n~l---~~----~~~~~~~~l~~L~~L~l~~n~l~ 162 (560)
. +...+..-+.|++|+|++|.. .. .+...+..-+.|+.|+++.|.+.
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 2 344566778899999987643 31 12345667789999999988765
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.61 E-value=0.00027 Score=67.58 Aligned_cols=79 Identities=19% Similarity=0.192 Sum_probs=54.9
Q ss_pred CCcccceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCC---CcceeeeEEEeCCEEEEEE
Q 035761 316 DFDIKYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHR---NIVKLYGFCLHEKCMFLIY 392 (560)
Q Consensus 316 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~ 392 (560)
+..-.+.+|.|..+.||+.+..+|+.|++|+...... .....|..|...|+.+... -+.+++++ .. .++||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~ 89 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEE
Confidence 3444667899999999999999999999998654321 1223577899998887422 23444443 22 36899
Q ss_pred eccCCCCH
Q 035761 393 EYMEMGSL 400 (560)
Q Consensus 393 e~~~~g~L 400 (560)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987653
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.40 E-value=0.00057 Score=69.28 Aligned_cols=78 Identities=10% Similarity=0.028 Sum_probs=45.7
Q ss_pred CCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCCCCceeecc--ccCccCccccccC---ccCcchhHHHHHHHHHH
Q 035761 437 TPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTLLAG--TYGSIAPELAYTM---VVTEKYDVYSFGVVALE 511 (560)
Q Consensus 437 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g--~~~~~aPE~~~~~---~~~~~~Dv~s~G~il~e 511 (560)
.+.++|+|++|.||+++.++ ++++||+.+..-.+.-. ...... ...|++|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999998876 99999998875321100 000000 1235555543311 11123455566777777
Q ss_pred HHhCC
Q 035761 512 VLMGK 516 (560)
Q Consensus 512 l~~g~ 516 (560)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.38 E-value=0.00026 Score=58.62 Aligned_cols=55 Identities=20% Similarity=0.245 Sum_probs=31.8
Q ss_pred EEEccCCcCc-ccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeecccccc
Q 035761 9 HLDLSDNHFM-GHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASNRM 65 (560)
Q Consensus 9 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~i 65 (560)
.++.++++++ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5666666665 23343322 3566666666666655555566666666666666654
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.36 E-value=0.00071 Score=66.18 Aligned_cols=141 Identities=20% Similarity=0.172 Sum_probs=72.5
Q ss_pred eeeccCCee-EEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCC--CCcceeeeEEEeCCEEEEEEeccCCC
Q 035761 322 CIGTGGYGS-VYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRH--RNIVKLYGFCLHEKCMFLIYEYMEMG 398 (560)
Q Consensus 322 ~ig~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 398 (560)
.++.|+... +|+....+|..+++|....... ..+..|..+++.+.. -.+.+++.+....+ +++||++.+.
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 455555554 6677654467777776543210 123356666665532 23455666544344 6899999776
Q ss_pred CHHHHhhcCCc-----------------------ccCCCHHHHH-------H-------------HHHHHHHHHHHHHh-
Q 035761 399 SLFCILRTDEE-----------------------AVGLDWTKRV-------N-------------IVKGMAHALSYLHH- 434 (560)
Q Consensus 399 ~L~~~l~~~~~-----------------------~~~l~~~~~~-------~-------------i~~~ia~~l~~LH~- 434 (560)
.+.+++..... ...++..... . ....+...++.+.+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 66544432110 0012211100 0 00111222233311
Q ss_pred --cCCCCeEEeCCCCCCeEeCCC----CcEEEeeecccccc
Q 035761 435 --HCTPPILHRDISSNNILLNSE----FEAFVADFGIARLL 469 (560)
Q Consensus 435 --~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~~ 469 (560)
...+.++|||+.+.||+++.+ +.+.++||+.+..-
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 123478999999999999875 67899999988753
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.35 E-value=0.0016 Score=63.23 Aligned_cols=159 Identities=13% Similarity=0.100 Sum_probs=86.8
Q ss_pred cCHHHHHHHhcCCcc-----cceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCC--cce
Q 035761 305 ITFQDMIEATEDFDI-----KYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRN--IVK 377 (560)
Q Consensus 305 ~~~~~~~~~~~~~~~-----~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~ 377 (560)
++.+++...-..|.. .+.++.|....+|+....+| .+++|....... .+.+..|..+++.+...+ +.+
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~----~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE----KNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC----HHHHHHHHHHHHHHHHCCCCCCc
Confidence 345555555555654 23466788899999987666 577888765211 123445677766653212 233
Q ss_pred eeeE------EEeCCEEEEEEeccCCCCHHH--------------HhhcC----Cccc----C-CCHHHHHH--------
Q 035761 378 LYGF------CLHEKCMFLIYEYMEMGSLFC--------------ILRTD----EEAV----G-LDWTKRVN-------- 420 (560)
Q Consensus 378 l~~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~~----~~~~----~-l~~~~~~~-------- 420 (560)
++.. ....+..+++++|++|..+.. .++.. .... . ..|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 223466789999999854310 01110 0000 0 12322111
Q ss_pred ----HHHHHHHHHHHHHhc----CCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 421 ----IVKGMAHALSYLHHH----CTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 421 ----i~~~ia~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
+...+.+.++++++. ..++++|+|+.+.||+++++..+.++||+.+..
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244455666532 234789999999999998876567999997754
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.28 E-value=0.00087 Score=64.51 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=42.5
Q ss_pred cceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCc-ceeeeEEEeCCEEEEEEecc-CC
Q 035761 320 KYCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNI-VKLYGFCLHEKCMFLIYEYM-EM 397 (560)
Q Consensus 320 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~ 397 (560)
.+.++.|....+|+. ..+++|+........ ....+|..+++.+...++ .+++++ ..+.-++++||+ ++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~---~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY---INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C---CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce---eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCC
Confidence 567888999999998 467888775432111 112457777776643233 345543 333357899999 55
Q ss_pred CCH
Q 035761 398 GSL 400 (560)
Q Consensus 398 g~L 400 (560)
.++
T Consensus 93 ~~l 95 (301)
T 3dxq_A 93 QTM 95 (301)
T ss_dssp EEC
T ss_pred ccC
Confidence 433
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.24 E-value=0.0041 Score=60.49 Aligned_cols=142 Identities=14% Similarity=0.152 Sum_probs=80.5
Q ss_pred ceeeccCCeeEEEEEeCCCcEEEEEEccchhhhhhhHHHHHHHHHHHhccCC--CCcceeeeE-----EEeCCEEEEEEe
Q 035761 321 YCIGTGGYGSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRH--RNIVKLYGF-----CLHEKCMFLIYE 393 (560)
Q Consensus 321 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~-----~~~~~~~~lv~e 393 (560)
..++ |....||+....+|+.+++|....... ....+..|..+++.+.. -.+.+++.. ....+..+++|+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 3466 888899998877787899999863221 12345567777776632 123444442 223556788999
Q ss_pred ccCCCCHH-----HH---------hhc----CC--cccCCCHHHH----HHH---------------HHHHHHHHHHHHh
Q 035761 394 YMEMGSLF-----CI---------LRT----DE--EAVGLDWTKR----VNI---------------VKGMAHALSYLHH 434 (560)
Q Consensus 394 ~~~~g~L~-----~~---------l~~----~~--~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~ 434 (560)
|++|..+. .+ +|. .. ....+++... ..+ ...+.+.++.+.+
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99874421 00 111 00 0011222211 001 1111122333332
Q ss_pred c----CCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 435 H----CTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 435 ~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
. ..+.++|+|+++.||+++ + .+.++||+.+..
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 234689999999999999 4 889999988764
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.18 E-value=0.00057 Score=56.52 Aligned_cols=35 Identities=31% Similarity=0.282 Sum_probs=14.2
Q ss_pred CcEEECcCCcCcCCCCccCcCCCCCcEEEccCccc
Q 035761 127 LTTLNMYNNKLDGPIPPELMNCSKLRILKLGNNLL 161 (560)
Q Consensus 127 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 161 (560)
|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444433333334444444444444433
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.08 E-value=0.00093 Score=67.73 Aligned_cols=71 Identities=23% Similarity=0.276 Sum_probs=47.0
Q ss_pred ceeeccCCeeEEEEEeCC--------CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCc-ceeeeEEEeCCEEEEE
Q 035761 321 YCIGTGGYGSVYRARLPS--------GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNI-VKLYGFCLHEKCMFLI 391 (560)
Q Consensus 321 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv 391 (560)
+.|+.|....+|++...+ ++.+++|+...... ...+.+|..+++.+...++ .++++.+. + .+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~----~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v 150 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET----ESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRL 150 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC----HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc----HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEE
Confidence 457788889999998753 47889998743111 1244578888888743333 56666543 2 389
Q ss_pred EeccCCCC
Q 035761 392 YEYMEMGS 399 (560)
Q Consensus 392 ~e~~~~g~ 399 (560)
+||+++.+
T Consensus 151 ~e~l~G~~ 158 (429)
T 1nw1_A 151 EEYIPSRP 158 (429)
T ss_dssp ECCCCEEE
T ss_pred EEEeCCcc
Confidence 99998643
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.00 E-value=0.0014 Score=64.97 Aligned_cols=141 Identities=20% Similarity=0.249 Sum_probs=81.4
Q ss_pred ceeeccCCeeEEEEEeCC--------CcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CCCcceeeeEEEeCCEEEEE
Q 035761 321 YCIGTGGYGSVYRARLPS--------GKVVALKKLHRLETELASLESFQNEARLLSQIR-HRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 321 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 391 (560)
+.+..|-...+|++...+ ++.+++|+..... .....+.+|..+++.+. +.-..++++++. + .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccE
Confidence 446668888999998752 4788898863311 22345568988888874 322355665543 2 289
Q ss_pred EeccCCCCHHHH-----------------hhcCCc--ccCCC--HHHHHHHHHHHHH-------------------HHHH
Q 035761 392 YEYMEMGSLFCI-----------------LRTDEE--AVGLD--WTKRVNIVKGMAH-------------------ALSY 431 (560)
Q Consensus 392 ~e~~~~g~L~~~-----------------l~~~~~--~~~l~--~~~~~~i~~~ia~-------------------~l~~ 431 (560)
|||++|..+..- +|.... ..... |.++.++..++.. .+++
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999998554210 111100 11122 4555555544322 2333
Q ss_pred HHh----c-CCCCeEEeCCCCCCeEeCCC----CcEEEeeeccccc
Q 035761 432 LHH----H-CTPPILHRDISSNNILLNSE----FEAFVADFGIARL 468 (560)
Q Consensus 432 LH~----~-~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 468 (560)
|.+ . ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 332 1 23368999999999999876 7899999998864
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.79 E-value=0.0036 Score=61.26 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=28.1
Q ss_pred CCeEEeCCCCCCeEeCCCCcEEEeeecccccc
Q 035761 438 PPILHRDISSNNILLNSEFEAFVADFGIARLL 469 (560)
Q Consensus 438 ~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 469 (560)
+.++|+|+.+.||++++++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47899999999999998888999999877653
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.66 E-value=0.0069 Score=61.68 Aligned_cols=74 Identities=19% Similarity=0.163 Sum_probs=46.2
Q ss_pred cceeeccCCeeEEEEEeCC-CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCCc-ceeeeEEEeCCEEEEEEeccCC
Q 035761 320 KYCIGTGGYGSVYRARLPS-GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNI-VKLYGFCLHEKCMFLIYEYMEM 397 (560)
Q Consensus 320 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 397 (560)
.+.|+.|-...+|++...+ +..+++|+........ -...+|..+++.+...++ .++++.+ .+ .+||||+++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---INREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---SCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---cCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCC
Confidence 3457788889999998765 4788888774322111 012478888888864444 4666665 23 259999987
Q ss_pred CCH
Q 035761 398 GSL 400 (560)
Q Consensus 398 g~L 400 (560)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 443
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.55 E-value=0.0069 Score=60.01 Aligned_cols=72 Identities=14% Similarity=0.066 Sum_probs=42.2
Q ss_pred ceeeccCCeeEEEEEeCC---------CcEEEEEEccchhhhhhhHHHHHHHHHHHhccCCCC-cceeeeEEEeCCEEEE
Q 035761 321 YCIGTGGYGSVYRARLPS---------GKVVALKKLHRLETELASLESFQNEARLLSQIRHRN-IVKLYGFCLHEKCMFL 390 (560)
Q Consensus 321 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~l 390 (560)
+.++.|....+|+....+ +..+++|+........ .....|.++++.+...+ +.++++.. ++ ++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~---~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL---YNTISEFEVYKTMSKYKIAPQLLNTF--NG--GR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT---SCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce---ecHHHHHHHHHHHHhcCCCCceEEec--CC--cE
Confidence 456778888999998654 2688888875432211 12346777777774333 34565443 32 68
Q ss_pred EEeccCCCC
Q 035761 391 IYEYMEMGS 399 (560)
Q Consensus 391 v~e~~~~g~ 399 (560)
||||+++..
T Consensus 112 v~e~i~G~~ 120 (369)
T 3c5i_A 112 IEEWLYGDP 120 (369)
T ss_dssp EEECCCSEE
T ss_pred EEEEecCCc
Confidence 999998754
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.40 E-value=0.011 Score=52.72 Aligned_cols=139 Identities=17% Similarity=0.063 Sum_probs=87.6
Q ss_pred CCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeeccccccCCCCCCce
Q 035761 398 GSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRT 477 (560)
Q Consensus 398 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 477 (560)
-+|.+.|...+. ++++.++..++.|.+++|.-+-... .-..+=+.|..|++..+|++.+.+ +.+.
T Consensus 33 vSL~eIL~~~~~--PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQ--PINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHcCC--CcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc----------
Confidence 478888876543 4999999999999999986652110 111333457889999999988764 1110
Q ss_pred eeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccccccccccccccccc------------------
Q 035761 478 LLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSSSSLDKNIKLIDLL------------------ 539 (560)
Q Consensus 478 ~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~~~~~~~~~~~~~~------------------ 539 (560)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-.....-+.++..++..|...
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~ 174 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGL 174 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHHTTCCC----------------
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHHHhccccccccccccccccccc
Confidence 0112367888753 3456788999999999999985555444444555555555555433
Q ss_pred -------CCCCCCChhHHHhhc
Q 035761 540 -------DPRLPPPGDQMIRQG 554 (560)
Q Consensus 540 -------dp~~~p~~~~~~~~~ 554 (560)
.+.-+.+++++++-|
T Consensus 175 ~d~~~~~~~~~~~sl~~Vi~~C 196 (229)
T 2yle_A 175 GDEDEKRKISAIRSYRDVMKLC 196 (229)
T ss_dssp ----CCSCCCCCCSHHHHHHHH
T ss_pred ccccccccccCcCCHHHHHHHH
Confidence 235778888888765
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.75 E-value=0.023 Score=56.42 Aligned_cols=144 Identities=17% Similarity=0.182 Sum_probs=80.7
Q ss_pred ceeeccCCeeEEEEEeCC--------CcEEEEEEccchhhh----------hh------hHHHHHHHHHHHhccC-CCCc
Q 035761 321 YCIGTGGYGSVYRARLPS--------GKVVALKKLHRLETE----------LA------SLESFQNEARLLSQIR-HRNI 375 (560)
Q Consensus 321 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~~------~~~~~~~e~~~l~~l~-h~ni 375 (560)
+.+..|-...+|++..++ ++.|.+++.-..... .. ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 345557778999988754 367888876432110 00 0112335888888874 4335
Q ss_pred ceeeeEEEeCCEEEEEEeccCCCCHHH--H---------------hhcCC--cccCCC--HHHHHHHHHHHH--------
Q 035761 376 VKLYGFCLHEKCMFLIYEYMEMGSLFC--I---------------LRTDE--EAVGLD--WTKRVNIVKGMA-------- 426 (560)
Q Consensus 376 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~--~~~~l~--~~~~~~i~~~ia-------- 426 (560)
.++++++. +. +|+||+++-+|.. + +|... ...... |.++.++..++.
T Consensus 138 Pkl~~~~~--~G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFP--QG--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEET--TE--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeC--CC--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 56666653 22 8999999754411 1 11110 011122 234444443321
Q ss_pred --------------HHHH----HHHhc-CCCCeEEeCCCCCCeEeCCC------CcEEEeeeccccc
Q 035761 427 --------------HALS----YLHHH-CTPPILHRDISSNNILLNSE------FEAFVADFGIARL 468 (560)
Q Consensus 427 --------------~~l~----~LH~~-~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg~~~~ 468 (560)
.-++ +|... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23222 23368999999999999876 7899999998764
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.38 E-value=0.14 Score=51.21 Aligned_cols=140 Identities=11% Similarity=0.090 Sum_probs=80.8
Q ss_pred ceeeccCCeeEEEEEeCC--------CcEEEEEEccchhhhhhhHHHHHHHHHHHhccC-CCCcceeeeEEEeCCEEEEE
Q 035761 321 YCIGTGGYGSVYRARLPS--------GKVVALKKLHRLETELASLESFQNEARLLSQIR-HRNIVKLYGFCLHEKCMFLI 391 (560)
Q Consensus 321 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 391 (560)
+.+..|-...+|+....+ ++.+++|+........ -...+|..+++.+. +.-..++++.+ .+ +.|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~---idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I 148 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF---YDSKVELDVFRYLSNINIAPNIIADF--PE--GRI 148 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC---CCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh---cCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEE
Confidence 446668888999998753 5788898865422111 12246777777774 22234555433 32 689
Q ss_pred EeccCCCCHHH-------H----------hhcC-------C---cccCCCHHHHHHHHHHH-------------------
Q 035761 392 YEYMEMGSLFC-------I----------LRTD-------E---EAVGLDWTKRVNIVKGM------------------- 425 (560)
Q Consensus 392 ~e~~~~g~L~~-------~----------l~~~-------~---~~~~l~~~~~~~i~~~i------------------- 425 (560)
|||++|..+.. . +|.. + ....--|.++.++..++
T Consensus 149 ~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l 228 (424)
T 3mes_A 149 EEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKI 228 (424)
T ss_dssp EECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHH
T ss_pred EEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHH
Confidence 99999865311 0 0100 0 00111244444443322
Q ss_pred HHHHHHHHhc---------------------CCCCeEEeCCCCCCeEeCCCCcEEEeeeccccc
Q 035761 426 AHALSYLHHH---------------------CTPPILHRDISSNNILLNSEFEAFVADFGIARL 468 (560)
Q Consensus 426 a~~l~~LH~~---------------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 468 (560)
...+++|.+. ....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 229 ~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 229 LEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2233333311 1235899999999999 7788999999998864
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=93.57 E-value=0.16 Score=45.12 Aligned_cols=126 Identities=6% Similarity=0.085 Sum_probs=85.0
Q ss_pred cCCCCcceeeeEEEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEeCCCCCC
Q 035761 370 IRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNN 449 (560)
Q Consensus 370 l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~N 449 (560)
..||+.++. .+-..++...+.|+.-+.+.=...++ .++..++++++.+|+...++++.. +|--+.|+|
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik------~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK------SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG------GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH------hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 368888876 56666776666665443222222232 278899999999999988776644 788899999
Q ss_pred eEeCCCCcEEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhHHHHHHHHHHHHhCCCCCCccccccccc
Q 035761 450 ILLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGKHPGELLSSSSSSL 529 (560)
Q Consensus 450 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv~s~G~il~el~~g~~P~~~~~~~~~~~ 529 (560)
++++.++.+++.-.|+-..+.+ . ..++..=.-.+=+++..+++++..|+..-.....+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P-----------------~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G~lel 167 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDP-----------------L-----PVSEAEFLTRYKALVICAFNEKQSFDALVEGNLEL 167 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSC-----------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHSCGGG
T ss_pred EEEcCCCCEEEEEccCccCCCC-----------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcChHhh
Confidence 9999999999988886544322 1 01111122346678888999999987555554444
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.30 E-value=0.31 Score=48.59 Aligned_cols=30 Identities=27% Similarity=0.419 Sum_probs=25.2
Q ss_pred CeEEeCCCCCCeEe------CCCCcEEEeeeccccc
Q 035761 439 PILHRDISSNNILL------NSEFEAFVADFGIARL 468 (560)
Q Consensus 439 ~ivH~dlk~~Nill------~~~~~~kl~Dfg~~~~ 468 (560)
.++|+|+.+.||++ +++..+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998864
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.32 E-value=0.32 Score=30.82 Aligned_cols=15 Identities=40% Similarity=0.722 Sum_probs=7.0
Q ss_pred CcchhhhhHHHHHHH
Q 035761 247 KTIATGLVAIILAMV 261 (560)
Q Consensus 247 ~~~~~~~~~~~~~~v 261 (560)
..++.++++.+++++
T Consensus 11 ~~IA~gVVgGv~~~~ 25 (44)
T 2ks1_B 11 PSIATGMVGALLLLL 25 (44)
T ss_dssp SSSTHHHHHHHHHHH
T ss_pred ceEEeehhHHHHHHH
Confidence 345555554444433
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=90.29 E-value=0.037 Score=56.40 Aligned_cols=62 Identities=18% Similarity=0.116 Sum_probs=17.8
Q ss_pred cceeeccCCeeEEEEEeCC-CcEEEE------EEccchhhhhhhHHHHHHHHHHHhccCCCCcceeeeEEEe
Q 035761 320 KYCIGTGGYGSVYRARLPS-GKVVAL------KKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLH 384 (560)
Q Consensus 320 ~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 384 (560)
.+.+| ||.||+|.+.. ..+||| |..+......+....|.+|..+++..+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 44565 99999998864 367888 7766544444455678899999999999999999988754
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=89.89 E-value=1.1 Score=39.92 Aligned_cols=117 Identities=13% Similarity=0.121 Sum_probs=79.3
Q ss_pred CCCCcceeeeEEEeCCEEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEEeCCCCCC
Q 035761 371 RHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALS-YLHHHCTPPILHRDISSNN 449 (560)
Q Consensus 371 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~dlk~~N 449 (560)
.||++ -...-.+++...+.++.-+++.=...++. ++..++++++.+|+.... +++. -+|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~------~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK------TTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT------SCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh------cCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCce
Confidence 68887 44445667777777776544433334432 788999999999988776 5554 4788899999
Q ss_pred eEeCCCCcEEEeeeccccccCCCCCCceeeccccCccCccccccCccCcchhH-HHHHHHHHHHHhCCCCCCccc
Q 035761 450 ILLNSEFEAFVADFGIARLLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDV-YSFGVVALEVLMGKHPGELLS 523 (560)
Q Consensus 450 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Dv-~s~G~il~el~~g~~P~~~~~ 523 (560)
+++|.++.+++.-.|.-..+. |.-. ...|. -.+=+++..++.++..|+..-
T Consensus 115 L~f~~~~~p~i~hRGi~~~lp-----------------P~e~------~ee~fl~qyKali~all~~K~~Fe~l~ 166 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESLP-----------------PDEW------DDERLLREVKATVLALTEGEYRFDEYL 166 (219)
T ss_dssp EEECTTCCEEESCCEETTTBS-----------------SCSC------CHHHHHHHHHHHHHHHTTCSSCHHHHH
T ss_pred EEEeCCCcEEEEEcCCcccCC-----------------CCCC------CHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 999999999998888654432 2210 11122 246667778888888776443
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=88.26 E-value=0.31 Score=30.83 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=18.1
Q ss_pred CcchhhhhHHHHHHHHHHHHHHhheeeEeccC
Q 035761 247 KTIATGLVAIILAMVAFLALIFGILIIRRRRD 278 (560)
Q Consensus 247 ~~~~~~~~~~~~~~v~~~~l~~~~~~~rr~r~ 278 (560)
.....+..+++.+++++++++.+++++.|+|+
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 45556555555566667666655444444443
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.26 E-value=0.36 Score=30.47 Aligned_cols=6 Identities=50% Similarity=1.027 Sum_probs=2.2
Q ss_pred chhhhh
Q 035761 249 IATGLV 254 (560)
Q Consensus 249 ~~~~~~ 254 (560)
++.+++
T Consensus 12 IA~gVV 17 (44)
T 2l2t_A 12 IAAGVI 17 (44)
T ss_dssp HHHHHH
T ss_pred EEEeeh
Confidence 333333
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.57 E-value=0.28 Score=30.93 Aligned_cols=6 Identities=50% Similarity=1.132 Sum_probs=2.4
Q ss_pred eeEecc
Q 035761 272 IIRRRR 277 (560)
Q Consensus 272 ~~rr~r 277 (560)
|+|||+
T Consensus 34 ~~RRR~ 39 (44)
T 2jwa_A 34 LIKRRQ 39 (44)
T ss_dssp HHHHHC
T ss_pred heehhh
Confidence 334433
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=86.94 E-value=0.59 Score=29.50 Aligned_cols=21 Identities=5% Similarity=-0.001 Sum_probs=9.4
Q ss_pred chhhhhHHHHHHHHHHHHHHh
Q 035761 249 IATGLVAIILAMVAFLALIFG 269 (560)
Q Consensus 249 ~~~~~~~~~~~~v~~~~l~~~ 269 (560)
...+..+++.++++++++...
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~ 29 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLT 29 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEeehHHHHHHHHHHHH
Confidence 444444444445444444443
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=78.64 E-value=5.8 Score=30.32 Aligned_cols=49 Identities=10% Similarity=0.070 Sum_probs=28.7
Q ss_pred CCcCcccCCCCCCCcCCCCEEEccCCcceecCCccccCCCCCCeeecccc
Q 035761 14 DNHFMGHIPPTLGRLSELKILNLSLNSLVGNIPSNVGHLTQLTTLAIASN 63 (560)
Q Consensus 14 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n 63 (560)
+..++.+-..+|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34455555566666666666666654 33355566666666666666553
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=75.86 E-value=7.5 Score=29.69 Aligned_cols=43 Identities=16% Similarity=0.070 Sum_probs=19.3
Q ss_pred CccCCCCcCCCCCccEEEccCCCccCCCCccCCCCCCCcEEECc
Q 035761 90 GGSIPSTLGHLKWLRSVDLSQNKLVGPIPSSLGHLTQLTTLNMY 133 (560)
Q Consensus 90 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 133 (560)
+.+....|.++.+|+.+.+..+ ++.+-..+|.+|.+|+.+.+.
T Consensus 9 t~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 9 VGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred CEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 3333444444445554444443 222344445555555554444
No 458
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=71.77 E-value=3.5 Score=25.56 Aligned_cols=12 Identities=17% Similarity=0.401 Sum_probs=4.6
Q ss_pred hhHHHHHHHHHH
Q 035761 253 LVAIILAMVAFL 264 (560)
Q Consensus 253 ~~~~~~~~v~~~ 264 (560)
+.+++.+++.++
T Consensus 16 ~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 16 IGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EeehhHHHHHHH
Confidence 333333444333
No 459
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=57.03 E-value=1.6e+02 Score=30.61 Aligned_cols=84 Identities=18% Similarity=0.214 Sum_probs=51.4
Q ss_pred ceeeeEEEeCCEEEEEEeccCCCCHHHHhh----------cCCcc----cCCCHHHHHHHHHHHHH--HHHHHHhcCCCC
Q 035761 376 VKLYGFCLHEKCMFLIYEYMEMGSLFCILR----------TDEEA----VGLDWTKRVNIVKGMAH--ALSYLHHHCTPP 439 (560)
Q Consensus 376 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~----------~~~~~----~~l~~~~~~~i~~~ia~--~l~~LH~~~~~~ 439 (560)
++.|.+........+ .|++++.++.+.+. ..... ....|..+..++.++|- -+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 445555554444333 57777655544443 21111 11235566677776653 3556643
Q ss_pred eEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 440 ILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 440 ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
+ +|=.+.|||++.+|++.=+|||.+-
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 2 5778899999999999999999874
No 460
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=53.77 E-value=1.3e+02 Score=31.84 Aligned_cols=45 Identities=27% Similarity=0.323 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHH--HHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 416 TKRVNIVKGMAH--ALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 416 ~~~~~i~~~ia~--~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
..+..++.++|- -+.|+=. -+|=.++|||++.+|++.-+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG-------lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG-------VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc-------CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 445566666543 3455543 26888999999999999999999874
No 461
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=53.12 E-value=14 Score=25.60 Aligned_cols=20 Identities=35% Similarity=0.366 Sum_probs=10.6
Q ss_pred HHHHHHHHHHhheeeEeccC
Q 035761 259 AMVAFLALIFGILIIRRRRD 278 (560)
Q Consensus 259 ~~v~~~~l~~~~~~~rr~r~ 278 (560)
++.++.+++.++||+-|-++
T Consensus 23 avaalg~li~gcwcylrlqr 42 (90)
T 1zza_A 23 AIAALGALILGCWCYLRLQR 42 (90)
T ss_dssp HHHHHHHHHHHHHTTTSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444456666666655443
No 462
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=38.29 E-value=27 Score=23.93 Aligned_cols=15 Identities=13% Similarity=0.339 Sum_probs=6.5
Q ss_pred hhHHHHHHHHHHHHH
Q 035761 253 LVAIILAMVAFLALI 267 (560)
Q Consensus 253 ~~~~~~~~v~~~~l~ 267 (560)
+++.+++++.++.+.
T Consensus 13 vlGg~~~lll~~glc 27 (70)
T 2klu_A 13 VLGGVAGLLLFIGLG 27 (70)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHH
Confidence 444444444444433
No 463
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=36.75 E-value=2.6e+02 Score=31.16 Aligned_cols=48 Identities=19% Similarity=0.227 Sum_probs=33.8
Q ss_pred CCHHH-HHHHHHHHHH--HHHHHHhcCCCCeEEeCCCCCCeEeCCCCcEEEeeecccc
Q 035761 413 LDWTK-RVNIVKGMAH--ALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR 467 (560)
Q Consensus 413 l~~~~-~~~i~~~ia~--~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 467 (560)
..|.+ +..++.++|- .+.|+=. | +|=.+.|||++.+|++.=+|||.+-
T Consensus 911 ~~~~~ar~nF~~S~A~ysvv~YiLg-----i--gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 911 EIYDAAIDLFTRSCAGYCVATFILG-----I--GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHT-----C--CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHHHHHHHHhhhhhheEEEEe-----e--cCCCCcceEEeCCCCEEEEeehhhh
Confidence 34544 3456666553 3456543 2 5778999999999999999999874
No 464
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=20.38 E-value=2.7e+02 Score=26.29 Aligned_cols=77 Identities=19% Similarity=0.166 Sum_probs=42.4
Q ss_pred EEEEEEeccCCCCHHHHhhcCCcccCCCHHHHHHHHHHH--HHHHHHHHhcCC-CCeEE-eCCCCCCeEeCCCCc-EEEe
Q 035761 387 CMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGM--AHALSYLHHHCT-PPILH-RDISSNNILLNSEFE-AFVA 461 (560)
Q Consensus 387 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i--a~~l~~LH~~~~-~~ivH-~dlk~~Nill~~~~~-~kl~ 461 (560)
..+++|+|.+|..|.+.-.... ...+... .+.++ +-+++++..+.. -+.+. ..=.+.|||++++.. +.++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~-~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~I 230 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSA-PEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI 230 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSH-HHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred cceehhhhcCCCccccchhhhh-hhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEE
Confidence 4679999999766543322110 0112222 23333 234555555432 12222 225788999977554 8899
Q ss_pred eeccccc
Q 035761 462 DFGIARL 468 (560)
Q Consensus 462 Dfg~~~~ 468 (560)
|-+.+..
T Consensus 231 Dhn~af~ 237 (342)
T 1cja_A 231 DSKIIPL 237 (342)
T ss_dssp SCCCCCC
T ss_pred cCCcccc
Confidence 9998855
Done!