Your job contains 1 sequence.
>035762
MDVKKAGSSLDSLISSFNTRIADLQELVIARNMYPVSTVADLSAIDAAVKAVELQVQAIK
SRVREETEAIPKAKKLIDASLRQQKILQNMSSYASSSLSQTMSMLDLNTTKTLLPESSKQ
QSNSVSFKPEEPAALPKEKKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMAT
YAEANAHLISAPKKKLAGNLWERALELRDIATVEAVKGKHFFLENDVKGPSLKLDNTGKA
ILTVLRHLGRISETRIGHHRVIILLKPQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035762
(268 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2101851 - symbol:AT3G60660 "AT3G60660" species... 954 5.9e-96 1
UNIPROTKB|E2RI68 - symbol:SKA1 "Uncharacterized protein" ... 207 8.6e-17 1
RGD|1310784 - symbol:Ska1 "spindle and kinetochore associ... 207 8.6e-17 1
UNIPROTKB|Q96BD8 - symbol:SKA1 "Spindle and kinetochore-a... 200 4.7e-16 1
UNIPROTKB|F1RPP2 - symbol:SKA1 "Uncharacterized protein" ... 200 4.7e-16 1
MGI|MGI:1913718 - symbol:Ska1 "spindle and kinetochore as... 198 7.7e-16 1
UNIPROTKB|G3X7D1 - symbol:LOC100851833 "Uncharacterized p... 196 1.3e-15 1
UNIPROTKB|Q0V7M7 - symbol:SKA1 "Spindle and kinetochore-a... 193 2.6e-15 1
ZFIN|ZDB-GENE-040718-334 - symbol:ska1 "spindle and kinet... 159 6.8e-10 1
UNIPROTKB|B0BM28 - symbol:ska1 "Spindle and kinetochore-a... 154 2.7e-09 1
TAIR|locus:2082013 - symbol:AT3G55860 "AT3G55860" species... 110 2.3e-05 1
>TAIR|locus:2101851 [details] [associations]
symbol:AT3G60660 "AT3G60660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL162295
EMBL:AK117601 EMBL:BT005101 IPI:IPI00535801 PIR:T47877
RefSeq:NP_191625.1 UniGene:At.4711 IntAct:Q9LZZ7 PaxDb:Q9LZZ7
PRIDE:Q9LZZ7 DNASU:825237 EnsemblPlants:AT3G60660.1 GeneID:825237
KEGG:ath:AT3G60660 TAIR:At3g60660 eggNOG:NOG315129
HOGENOM:HOG000006138 InParanoid:Q9LZZ7 OMA:HFFLETD PhylomeDB:Q9LZZ7
ProtClustDB:CLSN2685068 Genevestigator:Q9LZZ7 InterPro:IPR009829
Pfam:PF07160 Uniprot:Q9LZZ7
Length = 272
Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
Identities = 197/271 (72%), Positives = 230/271 (84%)
Query: 1 MDVKKAGSSLDSLISSFNTRIADLQELVIARNMYPVSTVADLSAIDAAVKAVELQVQAIK 60
M+ +AGSSLDSLI+SFN RI +LQELVIARNMYP ST+ DLSAID A+ ++ELQVQ+IK
Sbjct: 1 MEGNQAGSSLDSLIASFNKRIGELQELVIARNMYPASTIPDLSAIDTALSSMELQVQSIK 60
Query: 61 SRVREETEAIPKAKKLIDASLRQQKILQNMSSYASSSLSQTMSMLDLNTTKTLLPESSKQ 120
R+REETEAIPKAKKLI+ASL+QQ LQ MS YA S +ML+ + + LL E++KQ
Sbjct: 61 DRLREETEAIPKAKKLIEASLKQQGKLQKMSIYAPSHFPDKATMLNSDLNRCLLQENAKQ 120
Query: 121 --QSNSVS-FK-PEEPAALPKEKKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVN 176
Q +++S K EE A LPKEKKGRGSPPLWYIT +EL+SLSSYMRGRLTLEKVNAA+N
Sbjct: 121 YEQHSTLSSLKFDEEAAVLPKEKKGRGSPPLWYITVEELNSLSSYMRGRLTLEKVNAAIN 180
Query: 177 DMATYAEANAHLISAPKKKLAGNLWERALELRDIATVEAVKGKHFFLENDVKGPSLKLDN 236
DMA+YAEANAHLI+A K+KLA NLWE+AL+LRDI T +AVKGKHFFLE D+KGPSLKLDN
Sbjct: 181 DMASYAEANAHLIAASKQKLAENLWEKALKLRDIVTEQAVKGKHFFLETDMKGPSLKLDN 240
Query: 237 TGKAILTVLRHLGRISETRIGHHRVIILLKP 267
TGKAILTVLRHLGRISETRIG +RVIIL+KP
Sbjct: 241 TGKAILTVLRHLGRISETRIGQNRVIILMKP 271
>UNIPROTKB|E2RI68 [details] [associations]
symbol:SKA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0031110 "regulation of microtubule polymerization or
depolymerization" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0005876 "spindle microtubule" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000940 "condensed chromosome outer
kinetochore" evidence=IEA] [GO:0000090 "mitotic anaphase"
evidence=IEA] GO:GO:0005813 GO:GO:0007059 GO:GO:0051301
GO:GO:0000090 GO:GO:0005876 GO:GO:0031110 GO:GO:0000940
InterPro:IPR009829 Pfam:PF07160 CTD:220134
GeneTree:ENSGT00390000011654 OMA:DYKDVEH EMBL:AAEX03005559
RefSeq:XP_548812.1 Ensembl:ENSCAFT00000021087 GeneID:491691
KEGG:cfa:491691 NextBio:20864444 Uniprot:E2RI68
Length = 255
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 72/260 (27%), Positives = 123/260 (47%)
Query: 6 AGSSLDSLISSFNTRIADLQELVIARN--MYPV-STVADLSAIDAAVKAVELQVQAIKSR 62
A S L+ L S N +I +++ ++ RN P+ T+ D D + EL + ++S
Sbjct: 2 ASSDLEQLCSCINDKIGNIKRMLSLRNCGQEPILKTMLDKIG-DEIIVVNEL-LNKLESE 59
Query: 63 VREETEAIPKAKKLIDASLRQQKILQNMSSYASSSLSQTMSMLDLNTTKTLLPESSKQQS 122
++ + + K+L ++ + ++++ L Q +L L PE
Sbjct: 60 IQYQEQTNHSLKELCESLEEDYEDVEHLKENIPPHLPQITVSQNLANVSDLDPEEP---- 115
Query: 123 NSVSFKPEEPAALPKE-KKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMATY 181
K EEPA K K+ R + +ITSDE + + +YM+ RLT ++N V ++
Sbjct: 116 ----VKVEEPAPTKKPPKEQRSIKEMPFITSDEFNGIPAYMKSRLTYCQINDVVKEINKA 171
Query: 182 AEANAHLISAPKKKL---AGNLWERALELRDIATVEAVKGKHFFLENDVKG-PSLKLDNT 237
+ ++ PKK + A NL+ R + D T + KG++F +E D+K +LK D
Sbjct: 172 VVSKYKILHQPKKSMSSVARNLYHRFI---DEETKDT-KGQYFIVEADIKEFTALKADKR 227
Query: 238 GKAILTVLRHLGRISETRIG 257
IL +LRH R+SE R G
Sbjct: 228 FHVILNILRHCRRLSEIRGG 247
>RGD|1310784 [details] [associations]
symbol:Ska1 "spindle and kinetochore associated complex subunit
1" species:10116 "Rattus norvegicus" [GO:0000090 "mitotic anaphase"
evidence=ISO;ISS] [GO:0000940 "condensed chromosome outer
kinetochore" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0005876 "spindle microtubule" evidence=ISO;ISS] [GO:0007059
"chromosome segregation" evidence=ISO;ISS] [GO:0007067 "mitosis"
evidence=ISO;ISS] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0015630 "microtubule cytoskeleton"
evidence=ISO] [GO:0031110 "regulation of microtubule polymerization
or depolymerization" evidence=ISO;ISS] [GO:0051301 "cell division"
evidence=ISO;ISS] RGD:1310784 GO:GO:0005737 GO:GO:0005813
GO:GO:0007059 GO:GO:0051301 GO:GO:0000090 GO:GO:0008017
GO:GO:0005876 GO:GO:0031110 GO:GO:0000940 EMBL:CH474095
eggNOG:NOG315129 InterPro:IPR009829 Pfam:PF07160 CTD:220134
HOGENOM:HOG000154331 OrthoDB:EOG45X7X1 GeneTree:ENSGT00390000011654
OMA:DYKDVEH EMBL:BC158659 IPI:IPI00363177 RefSeq:NP_001099604.1
UniGene:Rn.106906 STRING:B0BN28 PRIDE:B0BN28
Ensembl:ENSRNOT00000020637 GeneID:291441 KEGG:rno:291441
NextBio:632603 Genevestigator:B0BN28 Uniprot:B0BN28
Length = 254
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 71/259 (27%), Positives = 132/259 (50%)
Query: 8 SSLDSLISSFNTRIADLQELVIARNMYPVSTV-ADLSAI-DAAVKAVELQVQ-AIKSRVR 64
S L+ L S N +I ++++++ R + T+ LS I D + EL Q ++ + +
Sbjct: 3 SDLEQLCSYVNEKIENIKKILSLRKLGQDPTLKTTLSKIGDEIITVNELLNQFELEIQYQ 62
Query: 65 EETEAIPKAKKLIDASLRQQKILQNMSSYASSSLSQTMSMLDLNTTKTLLPESSKQQSNS 124
E+T + K+L + + K ++++ + S L Q +++ +T K P+ ++S
Sbjct: 63 EQTNS--SLKELCKSLEEEFKDVEHLKEHIPSHLPQ-VTVTQSSTHK---PDLDPKES-- 114
Query: 125 VSFKPEEPAALPKE--KKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMATYA 182
K EEP LPK+ K+ R + +IT+DE + +YM+ RLT ++N + ++
Sbjct: 115 --VKAEEPV-LPKKPPKEQRVIKEMHFITTDEFSGVPAYMKSRLTYCQINDVIKEINKAV 171
Query: 183 EANAHLISAPKKKLAG---NLWERALELRDIATVEAVKGKHFFLENDVKG-PSLKLDNTG 238
+ +I PK ++ NL++R + + KG+HF +E D+K +LK+D
Sbjct: 172 VSKYKIIHQPKASMSSVKRNLYQRFIN----EETKDTKGRHFIVEADIKEFTTLKVDKKF 227
Query: 239 KAILTVLRHLGRISETRIG 257
I+ +LRH R+SE R G
Sbjct: 228 HVIMNILRHCQRLSEVRGG 246
>UNIPROTKB|Q96BD8 [details] [associations]
symbol:SKA1 "Spindle and kinetochore-associated protein 1"
species:9606 "Homo sapiens" [GO:0000090 "mitotic anaphase"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP] [GO:0031110
"regulation of microtubule polymerization or depolymerization"
evidence=IDA] [GO:0051301 "cell division" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0008017 "microtubule
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000940 "condensed chromosome outer kinetochore" evidence=IDA]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000087 "M
phase of mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005813
"centrosome" evidence=IDA] [GO:0015630 "microtubule cytoskeleton"
evidence=IDA] GO:GO:0005829 GO:GO:0005813 Reactome:REACT_115566
GO:GO:0007059 Reactome:REACT_21300 GO:GO:0051301 GO:GO:0000090
GO:GO:0008017 GO:GO:0005876 GO:GO:0031110 GO:GO:0000236
GO:GO:0000940 EMBL:CH471096 eggNOG:NOG315129 InterPro:IPR009829
Pfam:PF07160 CTD:220134 HOGENOM:HOG000154331 OrthoDB:EOG45X7X1
HOVERGEN:HBG082236 OMA:DYKDVEH EMBL:AK303464 EMBL:AK313968
EMBL:BC015706 IPI:IPI00059912 IPI:IPI00645447 RefSeq:NP_001034624.1
RefSeq:NP_659497.1 UniGene:Hs.134726 PDB:4AJ5 PDBsum:4AJ5
ProteinModelPortal:Q96BD8 SMR:Q96BD8 IntAct:Q96BD8
MINT:MINT-2813709 STRING:Q96BD8 PhosphoSite:Q96BD8 DMDM:74731226
PaxDb:Q96BD8 PRIDE:Q96BD8 DNASU:220134 Ensembl:ENST00000285116
Ensembl:ENST00000398452 Ensembl:ENST00000417656 GeneID:220134
KEGG:hsa:220134 UCSC:uc002let.3 UCSC:uc010xdl.2
GeneCards:GC18P047902 H-InvDB:HIX0022882 HGNC:HGNC:28109
HPA:HPA045495 neXtProt:NX_Q96BD8 PharmGKB:PA165429102
InParanoid:Q96BD8 PhylomeDB:Q96BD8 ChiTaRS:SKA1 GenomeRNAi:220134
NextBio:91003 Bgee:Q96BD8 CleanEx:HS_C18orf24 Genevestigator:Q96BD8
Uniprot:Q96BD8
Length = 255
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 62/257 (24%), Positives = 119/257 (46%)
Query: 6 AGSSLDSLISSFNTRIADLQELVIARNMYPVSTVAD-LSAIDAAVKAVELQVQAIKSRVR 64
A S L+ L S N +I ++++ + RN T+ L+ I + + + ++ ++
Sbjct: 2 ASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQ 61
Query: 65 EETEAIPKAKKLIDASLRQQKILQNMSSYASSSLSQTMSMLDLNTTKTLLPESSKQQSNS 124
+ + K+L ++ K ++++ S L Q + T++ + S
Sbjct: 62 YQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQ------VTVTQSCVKGSDLDPEEP 115
Query: 125 VSFKPEEPAALPKEKKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMATYAEA 184
+ + EP P K+ R + +IT DE + + SYM+ RLT ++N + ++ +
Sbjct: 116 IKVEEPEPVKKPP-KEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVIS 174
Query: 185 NAHLISAPKKKLAG---NLWERALELRDIATVEAVKGKHFFLENDVKG-PSLKLDNTGKA 240
++ PKK + NL+ R + D T + KG++F +E D+K +LK D
Sbjct: 175 KYKILHQPKKSMNSVTRNLYHRFI---DEETKDT-KGRYFIVEADIKEFTTLKADKKFHV 230
Query: 241 ILTVLRHLGRISETRIG 257
+L +LRH R+SE R G
Sbjct: 231 LLNILRHCRRLSEVRGG 247
>UNIPROTKB|F1RPP2 [details] [associations]
symbol:SKA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0031110
"regulation of microtubule polymerization or depolymerization"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0000940 "condensed chromosome outer kinetochore"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
GO:GO:0005813 GO:GO:0007059 GO:GO:0051301 GO:GO:0000090
GO:GO:0005876 GO:GO:0031110 GO:GO:0000940 InterPro:IPR009829
Pfam:PF07160 GeneTree:ENSGT00390000011654 OMA:DYKDVEH EMBL:CU570811
EMBL:CU914451 RefSeq:XP_001926583.4 RefSeq:XP_003480376.1
UniGene:Ssc.27187 Ensembl:ENSSSCT00000004990 GeneID:100157355
KEGG:ssc:100157355 Uniprot:F1RPP2
Length = 255
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 66/255 (25%), Positives = 119/255 (46%)
Query: 8 SSLDSLISSFNTRIADLQELVIARNMYPVSTVAD-LSAIDAAVKAVELQVQAIKSRVREE 66
S L+ L S N +I ++++ + RN T+ L+ I + V + ++ + +
Sbjct: 4 SDLEQLCSHINEKIGNIKKTLSLRNCGQEPTLKTILNKIGDEIIVVNELLNKLELEIEYQ 63
Query: 67 TEAIPKAKKLIDASLRQQKILQNMSSYASSSLSQTMSMLDLNTTKTLLPESSKQQSNSVS 126
+ ++L ++ K ++++ L Q ++ L PE + S
Sbjct: 64 EQTNSSLQELCESLEEDYKDVEHLKENIPPHLPQVTVTQNVVNGSDLDPEEPAKVEESAP 123
Query: 127 FKPEEPAALPKEKKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMATYAEANA 186
P++P PKE+ R + +ITSDE + + +YM+ RLT ++N + ++
Sbjct: 124 --PKKP---PKEQ--RNIKEMLFITSDEFNGIPAYMKSRLTYCQINDVIKEINKAVVGKY 176
Query: 187 HLISAPKKKL---AGNLWERALELRDIATVEAVKGKHFFLENDVKG-PSLKLDNTGKAIL 242
++ PKK + A NL+ R + D T E KG +F +E D+K +LK+D IL
Sbjct: 177 KILHQPKKSMNSVARNLYHRFI---DEETKET-KGHYFIVEADIKEFTALKVDKRFHVIL 232
Query: 243 TVLRHLGRISETRIG 257
+LRH R+SE R G
Sbjct: 233 NILRHCRRLSEVRGG 247
>MGI|MGI:1913718 [details] [associations]
symbol:Ska1 "spindle and kinetochore associated complex
subunit 1" species:10090 "Mus musculus" [GO:0000090 "mitotic
anaphase" evidence=ISO] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0000940 "condensed chromosome outer kinetochore" evidence=ISO]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=ISO] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0031110 "regulation of microtubule polymerization or
depolymerization" evidence=ISO] [GO:0051301 "cell division"
evidence=ISO] MGI:MGI:1913718 GO:GO:0005737 GO:GO:0005813
GO:GO:0007059 GO:GO:0051301 GO:GO:0000090 GO:GO:0008017
GO:GO:0005876 GO:GO:0031110 GO:GO:0000940 eggNOG:NOG315129
InterPro:IPR009829 Pfam:PF07160 CTD:220134 HOGENOM:HOG000154331
OrthoDB:EOG45X7X1 GeneTree:ENSGT00390000011654 HOVERGEN:HBG082236
EMBL:DQ926863 EMBL:DQ926864 EMBL:AK006442 EMBL:AK013233
EMBL:AK021226 EMBL:AK172500 EMBL:BC019940 IPI:IPI00315256
RefSeq:NP_001157827.1 RefSeq:NP_079857.3 UniGene:Mm.283406
ProteinModelPortal:Q9CPV1 SMR:Q9CPV1 STRING:Q9CPV1
PhosphoSite:Q9CPV1 PRIDE:Q9CPV1 Ensembl:ENSMUST00000040188
Ensembl:ENSMUST00000177604 GeneID:66468 KEGG:mmu:66468
UCSC:uc008fpe.2 InParanoid:Q005W7 NextBio:321778 Bgee:Q9CPV1
CleanEx:MM_2810433K01RIK Genevestigator:Q9CPV1 Uniprot:Q9CPV1
Length = 254
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 67/260 (25%), Positives = 130/260 (50%)
Query: 8 SSLDSLISSFNTRIADLQELVIARNM-YPVSTVADLSAIDAAVKAVELQVQAIKSRVREE 66
S L+ L S N +I ++++++ RN+ + LS I + AV + + ++ +
Sbjct: 3 SELEDLCSYVNEKIGNIKKILSIRNLGQDPALKTTLSKIGDEIIAVNELLNKFELEIQYQ 62
Query: 67 TEAIPKAKKLIDASLRQQ-KILQNMSSYASSSLSQTMSMLDLNTTKTLL--PESSKQQSN 123
+ K+L + SLR++ + ++++ + L Q + T++L+ PE ++S+
Sbjct: 63 EQTNSSLKELCE-SLREECEDVEHLKEHVPPHLPQ------VTATQSLVHKPEPDPKESD 115
Query: 124 SVSFKPEEPAALPKE--KKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMATY 181
K EEP LPK+ ++ R + +IT DE + +YM+ RLT ++N + ++
Sbjct: 116 ----KAEEPG-LPKKPPREQRVIKEMQFITMDEFSDVPAYMKSRLTYCQINDIIKEINKA 170
Query: 182 AEANAHLISAPKKKLAG---NLWERALELRDIATVEAVKGKHFFLENDVKG-PSLKLDNT 237
+ ++ PK ++ NL++R + + KG HF +E D+K +LK+D
Sbjct: 171 VVSKYKIMHQPKASMSSVKRNLYQRFIN----EETKDTKGHHFIVEADIKEFTALKVDKR 226
Query: 238 GKAILTVLRHLGRISETRIG 257
I+ +LRH R+SE R G
Sbjct: 227 FYVIMHILRHCHRLSEVRGG 246
>UNIPROTKB|G3X7D1 [details] [associations]
symbol:LOC100851833 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051301 "cell division" evidence=IEA] [GO:0031110
"regulation of microtubule polymerization or depolymerization"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0000940 "condensed chromosome outer kinetochore"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
GO:GO:0005813 GO:GO:0007059 GO:GO:0051301 GO:GO:0000090
GO:GO:0005876 GO:GO:0031110 GO:GO:0000940 InterPro:IPR009829
Pfam:PF07160 RefSeq:NP_001068795.2 UniGene:Bt.23453 GeneID:507703
KEGG:bta:507703 CTD:220134 NextBio:20868185
GeneTree:ENSGT00390000011654 OMA:DYKDVEH EMBL:DAAA02057015
Ensembl:ENSBTAT00000024245 Uniprot:G3X7D1
Length = 254
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 67/254 (26%), Positives = 117/254 (46%)
Query: 8 SSLDSLISSFNTRIADLQELVIARNMYPVSTVAD-LSAIDAAVKAVELQVQAIKSRVREE 66
S L+ L S N +I +++ + RN T+ L+ I + V + ++ ++ +
Sbjct: 3 SDLEQLCSHINEKIGNIKRTLSLRNCGQEPTLKTILNKIGDEIIVVNELLNKLELEIQYQ 62
Query: 67 TEAIPKAKKLIDASLRQQKILQNMSSYASSSLSQTMSMLDLNTTKTLLPESSKQQSNSVS 126
+ K+L ++ K ++++ L Q + T+ + S V
Sbjct: 63 EQTNSSLKELFESLEEDYKDVEHLKENIPPHLPQ------VTVTQNFVNGSDLDPEEPV- 115
Query: 127 FKPEEPAALPKE-KKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMATYAEAN 185
K EEPA K K+ R + +ITSDE + + +YM+ RLT +N + ++ +
Sbjct: 116 -KVEEPAPTKKPPKEQRSIKEMPFITSDEFNGIPAYMKSRLTYCHINDVIKEINKAVVSK 174
Query: 186 AHLISAPKKKL---AGNLWERALELRDIATVEAVKGKHFFLENDVKG-PSLKLDNTGKAI 241
++ PKK + A NL+ R + D T E KG +F +E D+K +LK+D I
Sbjct: 175 YKILHQPKKSMSSVARNLYHRFI---DEETKET-KGHYFVVEADIKEFTTLKVDKRFHGI 230
Query: 242 LTVLRHLGRISETR 255
L +LRH R+SE R
Sbjct: 231 LNILRHCRRLSEVR 244
>UNIPROTKB|Q0V7M7 [details] [associations]
symbol:SKA1 "Spindle and kinetochore-associated protein 1"
species:9913 "Bos taurus" [GO:0000940 "condensed chromosome outer
kinetochore" evidence=ISS] [GO:0005876 "spindle microtubule"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS] [GO:0051301
"cell division" evidence=ISS] [GO:0031110 "regulation of
microtubule polymerization or depolymerization" evidence=ISS]
[GO:0007067 "mitosis" evidence=ISS] [GO:0000090 "mitotic anaphase"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0000090 GO:GO:0008017
GO:GO:0005876 GO:GO:0031110 GO:GO:0000940 InterPro:IPR009829
Pfam:PF07160 EMBL:BT026543 EMBL:EH156388 IPI:IPI00713040
IPI:IPI00930026 RefSeq:NP_001068795.2 UniGene:Bt.23453
STRING:Q0V7M7 GeneID:507703 KEGG:bta:507703 CTD:220134
eggNOG:NOG243460 HOGENOM:HOG000154331 InParanoid:Q0V7M7
OrthoDB:EOG45X7X1 NextBio:20868185 Uniprot:Q0V7M7
Length = 254
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 66/254 (25%), Positives = 117/254 (46%)
Query: 8 SSLDSLISSFNTRIADLQELVIARNMYPVSTVAD-LSAIDAAVKAVELQVQAIKSRVREE 66
S L+ L + N +I +++ + RN T+ L+ I + V + ++ ++ +
Sbjct: 3 SDLEQLCAHINEKIGNIKRTLSLRNCGQEPTLKTILNKIGDEIIVVNELLNKLELEIQYQ 62
Query: 67 TEAIPKAKKLIDASLRQQKILQNMSSYASSSLSQTMSMLDLNTTKTLLPESSKQQSNSVS 126
+ K+L ++ K ++++ L Q + T+ + S V
Sbjct: 63 EQTNSSLKELFESLEEDYKDVEHLKENIPPHLPQ------VTVTQNFVNGSDLDPEEPV- 115
Query: 127 FKPEEPAALPKE-KKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMATYAEAN 185
K EEPA K K+ R + +ITSDE + + +YM+ RLT +N + ++ +
Sbjct: 116 -KVEEPAPTKKPPKEQRSIKEMPFITSDEFNGIPAYMKSRLTYCHINDVIKEINKAVVSK 174
Query: 186 AHLISAPKKKL---AGNLWERALELRDIATVEAVKGKHFFLENDVKG-PSLKLDNTGKAI 241
++ PKK + A NL+ R + D T E KG +F +E D+K +LK+D I
Sbjct: 175 YKILHQPKKSMSSVARNLYHRFI---DEETKET-KGHYFVVEADIKEFTTLKVDKRFHGI 230
Query: 242 LTVLRHLGRISETR 255
L +LRH R+SE R
Sbjct: 231 LNILRHCRRLSEVR 244
>ZFIN|ZDB-GENE-040718-334 [details] [associations]
symbol:ska1 "spindle and kinetochore associated
complex subunit 1" species:7955 "Danio rerio" [GO:0000090 "mitotic
anaphase" evidence=ISS] [GO:0051301 "cell division"
evidence=IEA;ISS] [GO:0000940 "condensed chromosome outer
kinetochore" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0031110 "regulation of microtubule polymerization
or depolymerization" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] ZFIN:ZDB-GENE-040718-334 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0000090 GO:GO:0008017
GO:GO:0005876 GO:GO:0031110 GO:GO:0000940 eggNOG:NOG315129
InterPro:IPR009829 Pfam:PF07160 CTD:220134 HOGENOM:HOG000154331
OrthoDB:EOG45X7X1 EMBL:BC076006 IPI:IPI00492879
RefSeq:NP_001002592.1 UniGene:Dr.9266 STRING:Q6DHG8 PRIDE:Q6DHG8
Ensembl:ENSDART00000057513 Ensembl:ENSDART00000145077 GeneID:436865
KEGG:dre:436865 GeneTree:ENSGT00390000011654 HOVERGEN:HBG082236
InParanoid:Q6DHG8 OMA:DYKDVEH NextBio:20831296 Bgee:Q6DHG8
Uniprot:Q6DHG8
Length = 258
Score = 159 (61.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 47/140 (33%), Positives = 73/140 (52%)
Query: 129 PEEPAALPKEKKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMATYAEANAHL 188
P+E P++ + + +IT E DS+ YM+GR+T +++NAAV + T + +
Sbjct: 123 PQEQGP-PRKTQRNQIKEMEFITVPEFDSIPPYMKGRVTYDQLNAAVQSINTAVTSKYKI 181
Query: 189 ISAPKKKLAGNLWERALELR--DIATVEAVKGKHFFLENDVKG-PSLKLDNTGKAILTVL 245
+ P K L N+ R+L+ R D T + KG F +E D+K LK+D +L +L
Sbjct: 182 LHQPVKTL-NNV-SRSLQQRFKDQETKDT-KGHFFVVEQDIKEFAQLKVDKRFVGMLNML 238
Query: 246 RHLGRISETRIGHHRVIILL 265
RH R+ E R G ILL
Sbjct: 239 RHCQRLKEVRGGGLTRFILL 258
>UNIPROTKB|B0BM28 [details] [associations]
symbol:ska1 "Spindle and kinetochore-associated protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000090 "mitotic
anaphase" evidence=ISS] [GO:0000940 "condensed chromosome outer
kinetochore" evidence=ISS] [GO:0005876 "spindle microtubule"
evidence=ISS] [GO:0007059 "chromosome segregation" evidence=ISS]
[GO:0007067 "mitosis" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=ISS] [GO:0031110 "regulation of microtubule
polymerization or depolymerization" evidence=ISS] [GO:0051301 "cell
division" evidence=ISS] GO:GO:0005737 GO:GO:0007059 GO:GO:0051301
GO:GO:0000090 GO:GO:0008017 GO:GO:0005876 GO:GO:0031110
GO:GO:0000940 eggNOG:NOG315129 InterPro:IPR009829 Pfam:PF07160
CTD:220134 HOGENOM:HOG000154331 EMBL:BC158262 RefSeq:NP_001119997.1
UniGene:Str.51897 STRING:B0BM28 GeneID:100144953 KEGG:xtr:100144953
Xenbase:XB-GENE-5759531 Uniprot:B0BM28
Length = 252
Score = 154 (59.3 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 56/250 (22%), Positives = 119/250 (47%)
Query: 10 LDSLISSFNTRIADLQELVIARNMYPVSTVADLSAIDAAVKAVELQVQAIKSRVRE-ETE 68
LD L S N++I+ +++ + RN + ++++ + + ++ ++ + + ETE
Sbjct: 6 LDELCSHVNSKISLIKKTLQLRN------IGQDPSLNSVLSKIAFEMHSLYNLLNNLETE 59
Query: 69 AIPKAKKLIDASLRQQKILQNMSSYASSSLSQTMSM-LDLNT-TKTLLPESSKQQSNSVS 126
+ ++ I SLR+ + +S L + + L T + + P+ + + V+
Sbjct: 60 V--QRQETIANSLRELQATVERDFTEASHLKENIPPHLPKRTQSSSSAPDEAPEMVVKVA 117
Query: 127 FKPEEPAALPKEKKGRGSPPLWYITSDELDSLSSYMRGRLTLEKVNAAVNDMATYAEANA 186
PE PA P ++K L IT E ++ +YM+ RLT E++N + ++
Sbjct: 118 -APE-PAKKPSKEKPIKEMEL--ITVHEFGTVPAYMKNRLTYEQINNIIEELNKAVVGKY 173
Query: 187 HLISAPKKKLAGNLWERALELRDIATVEAVKGKHFFLENDVKG-PSLKLDNTGKAILTVL 245
++ P K L+ ++ ++ T + KG+ F ++ D+K +K+D +L++L
Sbjct: 174 KILHQPLKSLSNQARKQLSRYKEEETKDT-KGQFFIVDQDIKDFTQVKVDKRFHGMLSIL 232
Query: 246 RHLGRISETR 255
RH R+ E R
Sbjct: 233 RHCHRLREIR 242
>TAIR|locus:2082013 [details] [associations]
symbol:AT3G55860 "AT3G55860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AY630781
IPI:IPI00539047 RefSeq:NP_191145.2 UniGene:At.50855
EnsemblPlants:AT3G55860.1 GeneID:824752 KEGG:ath:AT3G55860
TAIR:At3g55860 HOGENOM:HOG000142261 OMA:LFMTISE PhylomeDB:Q6DYC4
ProtClustDB:CLSN2925549 Genevestigator:Q6DYC4 Uniprot:Q6DYC4
Length = 154
Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 8 SSLDSLISSFNTRIADLQELVIARNMYPVSTVADLSAIDAAVKAVELQVQAIKSRVREET 67
SSL+SLISS +L +L M ++ L AI A+ ++VELQ+QAIK +R+
Sbjct: 11 SSLNSLISSLGDSARELIKLRSTLRMDGDVSITGLIAIIASFQSVELQIQAIKDLLRQRK 70
Query: 68 EAIPKAK 74
EAIP K
Sbjct: 71 EAIPNGK 77
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.127 0.338 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 268 268 0.00096 114 3 10 23 0.39 34
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 601 (64 KB)
Total size of DFA: 222 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.78u 0.08s 38.86t Elapsed: 00:00:02
Total cpu time: 38.79u 0.08s 38.87t Elapsed: 00:00:02
Start: Fri May 10 07:48:37 2013 End: Fri May 10 07:48:39 2013