Query 035766
Match_columns 128
No_of_seqs 132 out of 1145
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 10:07:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u7r_A NADPH-dependent FMN red 100.0 3.1E-36 1E-40 222.4 15.1 120 3-124 59-181 (190)
2 4hs4_A Chromate reductase; tri 100.0 5.1E-32 1.7E-36 200.5 15.7 123 3-127 65-190 (199)
3 3svl_A Protein YIEF; E. coli C 100.0 6.1E-31 2.1E-35 193.8 12.7 122 3-126 64-188 (193)
4 3s2y_A Chromate reductase; ura 99.9 1.1E-30 3.7E-35 193.2 0.0 123 3-127 65-190 (199)
5 2q62_A ARSH; alpha/beta, flavo 100.0 2.1E-27 7E-32 181.2 14.1 123 2-127 89-214 (247)
6 2fzv_A Putative arsenical resi 99.9 1.7E-27 5.7E-32 184.8 13.0 123 2-127 114-239 (279)
7 3fvw_A Putative NAD(P)H-depend 99.9 2.1E-26 7.4E-31 168.9 10.2 119 3-125 59-186 (192)
8 3gfs_A FMN-dependent NADPH-azo 99.9 4E-26 1.4E-30 164.1 10.9 116 2-124 54-170 (174)
9 3k1y_A Oxidoreductase; structu 99.9 9.8E-26 3.4E-30 166.1 10.8 113 3-125 77-190 (191)
10 1rtt_A Conserved hypothetical 99.9 2.8E-24 9.6E-29 156.5 12.8 120 3-124 64-185 (193)
11 2vzf_A NADH-dependent FMN redu 99.9 3.7E-23 1.3E-27 151.5 10.5 117 3-124 61-178 (197)
12 1t0i_A YLR011WP; FMN binding p 99.8 1.2E-20 4.1E-25 136.7 11.4 110 3-118 76-189 (191)
13 2hpv_A FMN-dependent NADH-azor 99.7 6.8E-17 2.3E-21 118.3 12.3 82 4-87 87-181 (208)
14 3p0r_A Azoreductase; structura 99.7 3.2E-17 1.1E-21 121.5 10.4 82 4-87 85-184 (211)
15 3r6w_A FMN-dependent NADH-azor 99.7 6.3E-17 2.1E-21 119.3 10.9 82 4-87 80-185 (212)
16 1sqs_A Conserved hypothetical 99.7 7.8E-17 2.7E-21 121.1 11.0 107 3-123 71-179 (242)
17 1t5b_A Acyl carrier protein ph 99.7 7.3E-17 2.5E-21 116.7 10.0 77 4-80 79-170 (201)
18 2zki_A 199AA long hypothetical 99.7 3E-16 1E-20 113.8 12.7 120 6-126 65-196 (199)
19 3u7i_A FMN-dependent NADH-azor 99.7 2.4E-16 8.1E-21 118.1 12.3 82 4-87 87-188 (223)
20 3lcm_A SMU.1420, putative oxid 99.7 4.1E-16 1.4E-20 114.3 13.0 81 3-87 65-164 (196)
21 2a5l_A Trp repressor binding p 99.7 5.6E-16 1.9E-20 112.2 13.4 119 6-125 66-199 (200)
22 1rli_A Trp repressor binding p 99.7 1.4E-16 4.9E-21 113.9 6.6 105 3-115 63-179 (184)
23 1ydg_A Trp repressor binding p 99.6 1.2E-15 4E-20 111.9 9.9 120 5-126 72-202 (211)
24 2amj_A Modulator of drug activ 99.6 4.4E-15 1.5E-19 109.6 13.0 77 4-80 63-175 (204)
25 3l9w_A Glutathione-regulated p 99.6 1.6E-15 5.5E-20 122.7 10.8 110 4-124 285-411 (413)
26 3f2v_A General stress protein 99.6 1.1E-14 3.6E-19 107.2 14.2 112 4-124 51-181 (192)
27 3b6i_A Flavoprotein WRBA; flav 99.6 2.4E-15 8.4E-20 108.6 9.1 119 6-125 63-197 (198)
28 2ark_A Flavodoxin; FMN, struct 99.6 2.2E-14 7.4E-19 103.9 13.2 118 6-125 47-169 (188)
29 1d4a_A DT-diaphorase, quinone 99.6 1E-14 3.4E-19 112.0 10.6 82 4-87 86-190 (273)
30 3d7n_A Flavodoxin, WRBA-like p 99.6 2.3E-14 7.8E-19 104.3 11.4 121 5-126 48-189 (193)
31 2q9u_A A-type flavoprotein; fl 99.5 5.8E-14 2E-18 111.8 12.1 106 5-126 301-408 (414)
32 3ha2_A NADPH-quinone reductase 99.5 9.1E-14 3.1E-18 101.0 12.0 82 4-87 44-143 (177)
33 2ohh_A Type A flavoprotein FPR 99.5 1.5E-13 5.2E-18 108.6 9.7 101 4-121 300-402 (404)
34 3tem_A Ribosyldihydronicotinam 99.5 4.9E-13 1.7E-17 100.3 11.8 77 4-80 85-184 (228)
35 3rpe_A MDAB, modulator of drug 99.4 2.8E-12 9.6E-17 96.0 12.0 82 4-87 76-193 (218)
36 2fz5_A Flavodoxin; alpha/beta 99.3 6.1E-12 2.1E-16 85.6 9.1 74 7-86 42-117 (137)
37 1ycg_A Nitric oxide reductase; 99.3 1.6E-11 5.5E-16 96.8 11.4 102 4-121 295-396 (398)
38 1e5d_A Rubredoxin\:oxygen oxid 99.2 4.1E-10 1.4E-14 88.8 13.2 103 4-123 296-398 (402)
39 3hly_A Flavodoxin-like domain; 99.1 3E-10 1E-14 80.4 9.1 104 4-126 44-147 (161)
40 4gi5_A Quinone reductase; prot 99.1 3.9E-10 1.3E-14 87.2 9.7 76 5-80 106-212 (280)
41 1czn_A Flavodoxin; FMN binding 99.1 5.5E-10 1.9E-14 78.8 9.4 72 7-80 42-118 (169)
42 5nul_A Flavodoxin; electron tr 99.1 1E-09 3.6E-14 75.0 9.7 94 7-118 41-136 (138)
43 3f6r_A Flavodoxin; FMN binding 99.0 7.1E-10 2.4E-14 76.7 7.6 71 8-80 45-121 (148)
44 1obo_A Flavodoxin; electron tr 99.0 1.9E-09 6.3E-14 76.1 9.5 71 8-80 43-118 (169)
45 3fni_A Putative diflavin flavo 99.0 1.4E-09 4.7E-14 77.1 8.7 101 4-123 49-149 (159)
46 1f4p_A Flavodoxin; electron tr 99.0 5.5E-10 1.9E-14 77.0 5.6 71 8-80 44-120 (147)
47 3klb_A Putative flavoprotein; 98.9 1.8E-08 6.3E-13 71.3 9.8 65 8-79 75-139 (162)
48 1ag9_A Flavodoxin; electron tr 98.8 5.6E-08 1.9E-12 69.3 11.8 72 7-80 41-117 (175)
49 2wc1_A Flavodoxin; electron tr 98.8 1.9E-08 6.4E-13 72.0 8.3 72 7-80 43-127 (182)
50 4ici_A Putative flavoprotein; 98.8 4.4E-08 1.5E-12 70.1 8.8 66 7-79 83-148 (171)
51 1yob_A Flavodoxin 2, flavodoxi 98.6 3.8E-07 1.3E-11 65.1 11.1 72 7-80 42-126 (179)
52 3edo_A Flavoprotein, putative 98.5 1.1E-07 3.9E-12 66.3 5.8 65 8-79 73-137 (151)
53 4dik_A Flavoprotein; TM0755, e 98.5 2.4E-07 8.3E-12 74.7 8.2 74 3-80 311-384 (410)
54 2fcr_A Flavodoxin; electron tr 98.4 7.8E-07 2.7E-11 63.1 6.6 72 7-80 41-122 (173)
55 1ykg_A SIR-FP, sulfite reducta 98.1 5.8E-06 2E-10 58.3 6.9 73 8-80 53-129 (167)
56 2bmv_A Flavodoxin; electron tr 97.9 3.5E-05 1.2E-09 53.8 7.3 69 7-79 40-113 (164)
57 1bvy_F Protein (cytochrome P45 97.9 1.7E-05 5.7E-10 57.7 5.3 72 9-80 65-140 (191)
58 2hna_A Protein MIOC, flavodoxi 97.7 2.3E-06 7.9E-11 58.9 -1.7 72 9-80 44-118 (147)
59 3hr4_A Nitric oxide synthase, 97.3 0.0012 4E-08 49.1 8.1 72 8-79 83-157 (219)
60 2xod_A NRDI protein, NRDI; fla 96.7 0.0027 9.3E-08 42.0 5.2 54 11-71 32-89 (119)
61 2bpo_A CPR, P450R, NADPH-cytoc 96.4 0.005 1.7E-07 52.4 6.0 72 9-80 95-171 (682)
62 3qe2_A CPR, P450R, NADPH--cyto 96.1 0.022 7.6E-07 47.9 8.3 69 11-79 70-141 (618)
63 1rlj_A NRDI protein; flavoprot 94.9 0.1 3.4E-06 35.7 6.9 86 10-119 42-129 (139)
64 3n3a_C Protein NRDI; ribonucle 94.7 0.071 2.4E-06 37.5 5.7 86 10-119 57-150 (153)
65 1tll_A Nitric-oxide synthase, 93.5 0.12 3.9E-06 44.1 5.8 71 9-79 55-170 (688)
66 3pdu_A 3-hydroxyisobutyrate de 73.8 11 0.00037 27.7 6.8 93 6-116 52-153 (287)
67 2fuk_A XC6422 protein; A/B hyd 72.1 3.7 0.00012 27.8 3.5 51 2-56 58-121 (220)
68 1vkh_A Putative serine hydrola 72.0 6.9 0.00023 27.7 5.1 51 2-55 62-122 (273)
69 3f67_A Putative dienelactone h 69.5 3 0.0001 28.6 2.6 52 2-56 48-125 (241)
70 1jkm_A Brefeldin A esterase; s 67.7 4.4 0.00015 30.6 3.4 53 2-55 130-193 (361)
71 3doj_A AT3G25530, dehydrogenas 63.7 27 0.00091 26.0 7.1 96 5-117 71-174 (310)
72 3ggo_A Prephenate dehydrogenas 63.5 37 0.0013 25.5 8.0 28 8-37 91-118 (314)
73 2h78_A Hibadh, 3-hydroxyisobut 62.7 28 0.00097 25.5 7.1 25 6-35 54-78 (302)
74 2qs9_A Retinoblastoma-binding 61.7 10 0.00036 25.1 4.2 51 2-55 23-75 (194)
75 1uxo_A YDEN protein; hydrolase 60.4 16 0.00056 24.0 4.9 61 2-66 21-82 (192)
76 3k96_A Glycerol-3-phosphate de 60.4 12 0.00042 28.9 4.8 27 6-38 94-120 (356)
77 2fx5_A Lipase; alpha-beta hydr 56.9 8.7 0.0003 27.0 3.2 54 2-56 65-128 (258)
78 3llu_A RAS-related GTP-binding 54.6 11 0.00037 25.6 3.2 49 6-55 90-138 (196)
79 2zsh_A Probable gibberellin re 54.0 32 0.0011 25.4 6.1 54 2-55 134-198 (351)
80 3vis_A Esterase; alpha/beta-hy 51.0 9.3 0.00032 27.9 2.6 54 2-56 112-177 (306)
81 3pef_A 6-phosphogluconate dehy 49.5 41 0.0014 24.4 6.0 24 6-34 52-75 (287)
82 3qha_A Putative oxidoreductase 49.2 62 0.0021 23.7 7.0 92 8-117 68-164 (296)
83 3bxp_A Putative lipase/esteras 48.6 13 0.00044 26.1 3.0 54 2-56 54-119 (277)
84 1jjf_A Xylanase Z, endo-1,4-be 48.2 12 0.00041 26.4 2.8 52 5-56 88-155 (268)
85 3ksr_A Putative serine hydrola 48.0 16 0.00056 25.6 3.5 53 1-55 43-109 (290)
86 2f7s_A C25KG, RAS-related prot 47.8 29 0.00098 23.6 4.6 48 5-55 101-150 (217)
87 4dll_A 2-hydroxy-3-oxopropiona 47.5 30 0.001 25.9 5.0 25 6-35 82-106 (320)
88 3g0o_A 3-hydroxyisobutyrate de 46.5 53 0.0018 24.1 6.2 92 8-117 61-161 (303)
89 3h04_A Uncharacterized protein 46.3 50 0.0017 22.2 5.7 56 4-66 51-113 (275)
90 3d59_A Platelet-activating fac 46.0 38 0.0013 25.4 5.4 23 2-25 114-136 (383)
91 4huj_A Uncharacterized protein 45.6 24 0.00082 24.8 4.0 38 6-55 76-113 (220)
92 3pe6_A Monoglyceride lipase; a 45.5 24 0.00081 24.2 3.9 51 1-55 57-122 (303)
93 3k2i_A Acyl-coenzyme A thioest 44.7 46 0.0016 25.4 5.8 52 2-55 172-233 (422)
94 3d0k_A Putative poly(3-hydroxy 44.5 19 0.00066 25.9 3.4 28 28-56 122-150 (304)
95 3t1o_A Gliding protein MGLA; G 43.6 25 0.00087 23.1 3.7 70 6-76 92-165 (198)
96 2pbl_A Putative esterase/lipas 43.2 20 0.00068 24.9 3.2 49 2-55 82-137 (262)
97 1isp_A Lipase; alpha/beta hydr 42.6 14 0.00047 24.3 2.2 54 2-55 19-77 (181)
98 3vrd_B FCCB subunit, flavocyto 42.6 17 0.00058 27.6 2.9 33 45-79 1-33 (401)
99 1zi8_A Carboxymethylenebutenol 42.5 32 0.0011 23.0 4.2 52 2-56 44-125 (236)
100 4e15_A Kynurenine formamidase; 42.4 5.7 0.0002 28.8 0.2 52 3-55 102-160 (303)
101 3ain_A 303AA long hypothetical 42.1 28 0.00096 25.7 4.1 55 2-56 109-172 (323)
102 3pfb_A Cinnamoyl esterase; alp 41.7 35 0.0012 23.3 4.4 50 2-55 64-127 (270)
103 3tri_A Pyrroline-5-carboxylate 41.2 41 0.0014 24.7 4.8 28 6-35 58-85 (280)
104 2b6h_A ADP-ribosylation factor 40.3 62 0.0021 21.6 5.4 47 6-55 91-139 (192)
105 1w8x_N Protein P31, protein C, 40.0 7.2 0.00025 25.6 0.4 11 18-28 11-21 (126)
106 3hxk_A Sugar hydrolase; alpha- 39.8 21 0.00073 24.9 3.0 53 2-55 62-127 (276)
107 4fs3_A Enoyl-[acyl-carrier-pro 39.4 38 0.0013 24.3 4.3 34 43-79 3-36 (256)
108 2hm7_A Carboxylesterase; alpha 39.0 15 0.00051 26.5 2.0 54 2-55 93-155 (310)
109 3fla_A RIFR; alpha-beta hydrol 39.0 76 0.0026 21.4 5.8 57 2-66 36-103 (267)
110 3hju_A Monoglyceride lipase; a 39.0 73 0.0025 22.6 5.9 51 1-55 75-140 (342)
111 3trd_A Alpha/beta hydrolase; c 38.4 69 0.0023 21.0 5.3 51 2-56 52-115 (208)
112 1z0f_A RAB14, member RAS oncog 37.7 26 0.00088 22.6 3.0 72 5-79 81-155 (179)
113 1qv9_A F420-dependent methylen 37.4 27 0.00092 26.4 3.2 56 11-80 64-120 (283)
114 3imk_A Putative molybdenum car 37.3 1E+02 0.0035 21.4 7.8 65 6-79 68-132 (158)
115 2qjw_A Uncharacterized protein 37.2 16 0.00056 23.5 1.8 48 4-55 24-82 (176)
116 3ga7_A Acetyl esterase; phosph 37.1 61 0.0021 23.5 5.2 55 2-56 106-170 (326)
117 2iwr_A Centaurin gamma 1; ANK 37.0 28 0.00097 22.6 3.1 48 7-54 68-116 (178)
118 1x3s_A RAS-related protein RAB 36.7 47 0.0016 21.8 4.2 49 6-55 82-130 (195)
119 2x77_A ADP-ribosylation factor 36.7 68 0.0023 21.0 5.1 46 9-55 87-132 (189)
120 1o5z_A Folylpolyglutamate synt 36.5 1.3E+02 0.0044 23.5 7.3 47 28-79 36-82 (442)
121 1lnz_A SPO0B-associated GTP-bi 36.4 38 0.0013 25.9 4.1 54 2-55 227-283 (342)
122 1r8s_A ADP-ribosylation factor 36.2 72 0.0025 20.1 5.0 46 7-55 63-110 (164)
123 3bjr_A Putative carboxylestera 36.1 36 0.0012 23.9 3.7 54 2-56 69-134 (283)
124 2il1_A RAB12; G-protein, GDP, 36.1 28 0.00095 23.3 3.0 49 5-55 92-140 (192)
125 1z0j_A RAB-22, RAS-related pro 35.8 28 0.00094 22.3 2.8 48 6-55 73-120 (170)
126 4fgw_A Glycerol-3-phosphate de 35.7 39 0.0013 26.7 4.1 43 5-57 111-154 (391)
127 2p5s_A RAS and EF-hand domain 35.6 21 0.00073 24.1 2.3 48 5-55 94-142 (199)
128 2oil_A CATX-8, RAS-related pro 35.6 39 0.0013 22.4 3.7 47 6-55 92-139 (193)
129 3dfu_A Uncharacterized protein 35.5 81 0.0028 22.9 5.6 24 9-36 41-64 (232)
130 2o7r_A CXE carboxylesterase; a 35.2 42 0.0014 24.4 4.0 54 2-55 104-169 (338)
131 4dnp_A DAD2; alpha/beta hydrol 35.1 99 0.0034 20.6 6.1 21 43-65 86-106 (269)
132 1y7o_A ATP-dependent CLP prote 35.0 50 0.0017 23.6 4.3 69 2-76 35-104 (218)
133 1zj6_A ADP-ribosylation factor 35.0 94 0.0032 20.3 6.0 49 6-55 78-126 (187)
134 1moz_A ARL1, ADP-ribosylation 34.7 72 0.0025 20.6 4.9 47 8-55 82-128 (183)
135 3d7r_A Esterase; alpha/beta fo 34.5 28 0.00095 25.5 2.9 51 2-55 115-172 (326)
136 3fk4_A Rubisco-like protein; s 34.4 1E+02 0.0035 24.6 6.3 64 6-79 289-356 (414)
137 4a7p_A UDP-glucose dehydrogena 34.3 1.4E+02 0.0047 23.8 7.2 33 6-38 79-116 (446)
138 1ek0_A Protein (GTP-binding pr 34.2 36 0.0012 21.6 3.2 47 5-54 69-116 (170)
139 2hjg_A GTP-binding protein ENG 34.2 86 0.0029 24.4 5.9 36 3-39 74-109 (436)
140 3dkr_A Esterase D; alpha beta 34.0 1E+02 0.0034 20.3 7.2 57 2-66 38-110 (251)
141 4fle_A Esterase; structural ge 33.9 26 0.00089 23.3 2.5 39 14-56 33-72 (202)
142 3l6d_A Putative oxidoreductase 33.8 1.4E+02 0.0046 22.0 6.7 64 6-81 60-125 (306)
143 1zd9_A ADP-ribosylation factor 33.5 76 0.0026 20.9 4.9 46 7-55 86-133 (188)
144 3nrs_A Dihydrofolate:folylpoly 33.3 1.3E+02 0.0045 23.5 6.9 53 51-107 54-108 (437)
145 2fg5_A RAB-22B, RAS-related pr 33.2 43 0.0015 22.3 3.6 71 6-79 90-163 (192)
146 1upt_A ARL1, ADP-ribosylation 33.2 73 0.0025 20.2 4.6 47 8-55 71-117 (171)
147 3dz8_A RAS-related protein RAB 33.2 30 0.001 23.1 2.7 72 5-79 89-163 (191)
148 1w78_A FOLC bifunctional prote 33.2 1.5E+02 0.0051 22.8 7.1 45 29-78 34-78 (422)
149 2dpo_A L-gulonate 3-dehydrogen 33.0 67 0.0023 24.3 4.9 15 7-21 83-97 (319)
150 4dcu_A GTP-binding protein ENG 32.9 1.1E+02 0.0039 23.9 6.4 45 4-54 95-139 (456)
151 2c7b_A Carboxylesterase, ESTE1 32.8 17 0.0006 26.1 1.5 55 2-56 92-156 (311)
152 1fzq_A ADP-ribosylation factor 32.7 1E+02 0.0034 20.2 5.4 49 6-55 78-126 (181)
153 3fak_A Esterase/lipase, ESTE5; 32.6 28 0.00096 25.5 2.7 53 2-56 99-159 (322)
154 4e12_A Diketoreductase; oxidor 32.6 1.1E+02 0.0038 22.1 6.1 16 7-22 81-96 (283)
155 1lzl_A Heroin esterase; alpha/ 32.5 22 0.00074 25.9 2.0 55 2-56 98-162 (323)
156 3fsg_A Alpha/beta superfamily 32.0 25 0.00084 23.8 2.1 60 2-66 37-106 (272)
157 3bdi_A Uncharacterized protein 31.8 36 0.0012 22.1 2.9 54 2-56 43-110 (207)
158 1r2q_A RAS-related protein RAB 31.7 42 0.0014 21.3 3.2 46 6-54 73-119 (170)
159 3gk3_A Acetoacetyl-COA reducta 31.6 11 0.00038 27.2 0.3 34 18-56 2-35 (269)
160 2erx_A GTP-binding protein DI- 31.5 18 0.0006 23.3 1.3 50 6-55 69-118 (172)
161 3tw8_B RAS-related protein RAB 31.4 24 0.00082 22.8 1.9 45 8-55 78-122 (181)
162 3o4h_A Acylamino-acid-releasin 31.3 22 0.00077 28.0 2.0 51 2-56 378-447 (582)
163 3k6k_A Esterase/lipase; alpha/ 31.1 26 0.00088 25.7 2.2 53 2-56 99-159 (322)
164 3zs7_A Pyridoxal kinase; trans 31.0 1.1E+02 0.0038 22.6 5.8 40 46-88 3-44 (300)
165 2h17_A ADP-ribosylation factor 31.0 92 0.0031 20.3 5.0 47 8-55 85-131 (181)
166 3pzs_A PM kinase, pyridoxamine 30.7 1.2E+02 0.0042 22.0 6.0 39 47-88 5-45 (289)
167 1l7a_A Cephalosporin C deacety 30.7 24 0.00081 24.8 1.9 25 30-55 157-181 (318)
168 2b0j_A 5,10-methenyltetrahydro 30.4 26 0.0009 27.3 2.2 33 6-39 136-168 (358)
169 1jbw_A Folylpolyglutamate synt 30.3 1.5E+02 0.0051 22.9 6.7 69 29-106 24-94 (428)
170 3azo_A Aminopeptidase; POP fam 30.2 60 0.0021 25.8 4.5 52 2-55 442-511 (662)
171 3ebl_A Gibberellin receptor GI 30.2 76 0.0026 23.8 4.9 53 3-55 134-197 (365)
172 3hlk_A Acyl-coenzyme A thioest 30.2 1.3E+02 0.0045 23.2 6.4 51 3-55 189-249 (446)
173 3ulk_A Ketol-acid reductoisome 30.1 27 0.00093 28.7 2.3 32 42-79 33-64 (491)
174 4dhe_A Probable GTP-binding pr 29.4 60 0.002 22.0 3.9 41 9-55 113-153 (223)
175 2a5j_A RAS-related protein RAB 29.4 32 0.0011 22.9 2.3 47 6-55 88-135 (191)
176 2f6i_A ATP-dependent CLP prote 29.1 91 0.0031 22.2 4.9 69 1-76 28-97 (215)
177 2rcy_A Pyrroline carboxylate r 29.0 81 0.0028 22.2 4.6 27 6-38 53-79 (262)
178 3ruf_A WBGU; rossmann fold, UD 28.7 34 0.0012 25.2 2.6 37 19-60 3-39 (351)
179 3tkl_A RAS-related protein RAB 28.6 35 0.0012 22.5 2.4 48 5-55 82-130 (196)
180 3l21_A DHDPS, dihydrodipicolin 28.3 79 0.0027 23.7 4.6 29 10-38 109-137 (304)
181 4b63_A L-ornithine N5 monooxyg 28.3 61 0.0021 25.8 4.2 42 11-55 202-255 (501)
182 2dyk_A GTP-binding protein; GT 28.1 82 0.0028 19.7 4.2 44 6-55 74-117 (161)
183 3cf4_G Acetyl-COA decarboxylas 27.9 75 0.0026 21.5 4.1 43 30-79 24-66 (170)
184 3pfn_A NAD kinase; structural 27.9 22 0.00075 28.0 1.4 11 11-21 246-256 (365)
185 2bcg_Y Protein YP2, GTP-bindin 27.8 29 0.00099 23.4 1.9 46 8-55 77-122 (206)
186 1lns_A X-prolyl dipeptidyl ami 27.7 44 0.0015 28.4 3.3 50 6-55 273-348 (763)
187 2ord_A Acoat, acetylornithine 27.2 1.1E+02 0.0037 22.8 5.2 68 12-79 128-221 (397)
188 2efe_B Small GTP-binding prote 27.1 48 0.0016 21.4 2.9 71 6-79 79-152 (181)
189 3l0i_B RAS-related protein RAB 26.8 40 0.0014 22.6 2.5 44 8-54 102-146 (199)
190 3uxy_A Short-chain dehydrogena 26.7 1.4E+02 0.0046 21.4 5.5 15 42-56 24-38 (266)
191 3rm3_A MGLP, thermostable mono 26.7 1.5E+02 0.0051 20.0 7.5 48 2-55 56-117 (270)
192 3d64_A Adenosylhomocysteinase; 26.7 62 0.0021 26.4 3.9 64 7-79 229-304 (494)
193 3arc_X Photosystem II PSBX pro 26.6 33 0.0011 18.3 1.5 12 26-37 2-13 (39)
194 1zbd_A Rabphilin-3A; G protein 26.5 35 0.0012 22.9 2.1 70 7-79 76-148 (203)
195 2cby_A ATP-dependent CLP prote 26.5 1.3E+02 0.0043 21.2 5.2 68 2-75 17-85 (208)
196 1wyz_A Putative S-adenosylmeth 26.5 1.7E+02 0.0057 20.9 6.0 12 6-17 26-37 (242)
197 1f6b_A SAR1; gtpases, N-termin 26.2 77 0.0026 21.3 3.9 43 9-55 90-135 (198)
198 1mky_A Probable GTP-binding pr 26.0 69 0.0024 25.0 4.0 45 4-54 74-118 (439)
199 3dqz_A Alpha-hydroxynitrIle ly 25.7 1.3E+02 0.0046 19.9 5.1 59 1-65 19-89 (258)
200 3bc1_A RAS-related protein RAB 25.6 27 0.00092 22.8 1.4 47 6-55 88-136 (195)
201 1ksh_A ARF-like protein 2; sma 25.5 80 0.0027 20.6 3.8 44 8-55 82-128 (186)
202 2wir_A Pesta, alpha/beta hydro 25.5 29 0.00099 25.0 1.6 54 2-55 95-157 (313)
203 3pqc_A Probable GTP-binding pr 25.4 75 0.0026 20.7 3.7 45 5-55 98-142 (195)
204 3r0v_A Alpha/beta hydrolase fo 25.3 87 0.003 20.9 4.1 55 2-65 39-103 (262)
205 2o52_A RAS-related protein RAB 25.3 41 0.0014 22.7 2.3 46 7-55 93-139 (200)
206 2uz0_A Esterase, tributyrin es 25.3 30 0.001 23.7 1.6 50 6-56 63-127 (263)
207 2pb2_A Acetylornithine/succiny 25.0 1.1E+02 0.0039 23.2 5.1 67 13-79 147-239 (420)
208 3c7a_A Octopine dehydrogenase; 25.0 1.4E+02 0.0047 22.8 5.5 26 7-38 78-103 (404)
209 1c1d_A L-phenylalanine dehydro 24.8 1.6E+02 0.0055 22.7 5.9 25 29-55 160-184 (355)
210 2fu5_C RAS-related protein RAB 24.8 35 0.0012 22.3 1.8 44 9-55 78-122 (183)
211 3qvm_A OLEI00960; structural g 24.8 1.6E+02 0.0054 19.6 6.4 60 2-65 44-114 (282)
212 1jay_A Coenzyme F420H2:NADP+ o 24.7 58 0.002 22.2 3.1 26 6-37 59-84 (212)
213 3iev_A GTP-binding protein ERA 24.7 1.2E+02 0.004 22.4 4.9 46 4-54 85-130 (308)
214 2i3d_A AGR_C_3351P, hypothetic 24.6 1.7E+02 0.0057 19.8 6.2 51 2-55 68-130 (249)
215 1ks9_A KPA reductase;, 2-dehyd 24.6 93 0.0032 22.1 4.3 25 6-32 58-82 (291)
216 2ged_A SR-beta, signal recogni 24.4 80 0.0027 20.7 3.7 14 104-117 175-188 (193)
217 2bme_A RAB4A, RAS-related prot 24.3 25 0.00085 23.1 1.0 46 7-55 78-124 (186)
218 2gf9_A RAS-related protein RAB 24.3 30 0.001 23.0 1.4 69 8-79 91-162 (189)
219 1z0s_A Probable inorganic poly 23.8 26 0.00088 26.4 1.1 18 11-28 172-193 (278)
220 1jji_A Carboxylesterase; alpha 23.8 34 0.0012 24.8 1.7 54 2-55 98-160 (311)
221 2rir_A Dipicolinate synthase, 23.7 1.5E+02 0.0052 21.6 5.4 48 6-55 112-166 (300)
222 2gj8_A MNME, tRNA modification 23.6 96 0.0033 20.2 3.9 45 7-54 79-123 (172)
223 1x0v_A GPD-C, GPDH-C, glycerol 23.5 1E+02 0.0036 22.8 4.5 26 7-38 86-111 (354)
224 3r40_A Fluoroacetate dehalogen 23.5 75 0.0026 21.7 3.5 22 43-66 100-121 (306)
225 1tht_A Thioesterase; 2.10A {Vi 23.5 77 0.0026 23.1 3.7 51 1-56 50-116 (305)
226 3r7w_A Gtpase1, GTP-binding pr 23.4 47 0.0016 24.6 2.5 49 7-55 76-124 (307)
227 3oet_A Erythronate-4-phosphate 23.3 1.1E+02 0.0036 24.1 4.6 67 7-79 78-146 (381)
228 4f0j_A Probable hydrolytic enz 23.3 1.6E+02 0.0054 20.1 5.2 63 1-66 61-131 (315)
229 1txg_A Glycerol-3-phosphate de 23.1 98 0.0034 22.6 4.2 26 7-38 67-92 (335)
230 3clv_A RAB5 protein, putative; 23.0 63 0.0022 21.0 2.9 71 5-79 110-181 (208)
231 2qru_A Uncharacterized protein 22.9 91 0.0031 21.9 3.9 49 4-55 49-104 (274)
232 3qit_A CURM TE, polyketide syn 22.8 1.3E+02 0.0043 20.0 4.5 22 43-66 91-112 (286)
233 2r11_A Carboxylesterase NP; 26 22.8 33 0.0011 24.3 1.5 60 2-65 83-150 (306)
234 2q1s_A Putative nucleotide sug 22.6 32 0.0011 25.8 1.4 42 18-59 2-45 (377)
235 1g16_A RAS-related protein SEC 22.5 40 0.0014 21.4 1.8 47 6-55 70-117 (170)
236 3ez2_A Plasmid partition prote 22.4 2E+02 0.0067 21.8 6.0 16 5-20 260-275 (398)
237 2y8e_A RAB-protein 6, GH09086P 22.4 44 0.0015 21.4 2.0 47 6-55 81-128 (179)
238 2vos_A Folylpolyglutamate synt 22.3 2.5E+02 0.0085 22.3 6.7 69 29-106 49-119 (487)
239 2pv7_A T-protein [includes: ch 22.3 1E+02 0.0035 22.6 4.2 26 6-37 60-85 (298)
240 3nuz_A Putative acetyl xylan e 22.1 96 0.0033 23.6 4.1 26 29-55 213-238 (398)
241 3cph_A RAS-related protein SEC 22.0 51 0.0017 22.1 2.3 47 6-55 87-134 (213)
242 3d1c_A Flavin-containing putat 21.9 29 0.00098 25.6 1.0 42 11-54 131-174 (369)
243 3e8x_A Putative NAD-dependent 21.9 34 0.0012 23.7 1.4 19 42-60 17-35 (236)
244 1ufo_A Hypothetical protein TT 21.9 57 0.002 21.5 2.5 23 29-55 91-113 (238)
245 1qd9_A Purine regulatory prote 21.6 1.1E+02 0.0038 19.5 3.8 39 82-123 24-62 (124)
246 3gd5_A Otcase, ornithine carba 21.5 2.5E+02 0.0087 21.4 6.3 58 12-79 104-185 (323)
247 2yc2_C IFT27, small RAB-relate 21.3 34 0.0012 22.7 1.3 68 9-79 94-168 (208)
248 3hyw_A Sulfide-quinone reducta 21.3 61 0.0021 25.0 2.8 31 47-79 3-33 (430)
249 4adb_A Succinylornithine trans 21.3 2.5E+02 0.0085 20.6 6.6 65 12-79 128-221 (406)
250 3kwp_A Predicted methyltransfe 21.3 2.6E+02 0.0088 20.8 6.9 13 5-17 35-47 (296)
251 2hup_A RAS-related protein RAB 21.2 59 0.002 21.9 2.5 68 6-76 96-166 (201)
252 2eh6_A Acoat, acetylornithine 21.2 1.2E+02 0.0039 22.2 4.3 19 13-31 118-136 (375)
253 2ecf_A Dipeptidyl peptidase IV 21.1 86 0.0029 25.3 3.8 50 4-55 543-610 (741)
254 1wf3_A GTP-binding protein; GT 21.1 1.7E+02 0.0058 21.6 5.2 46 6-55 81-126 (301)
255 3b1f_A Putative prephenate deh 21.1 1.2E+02 0.0042 21.7 4.4 24 8-37 63-86 (290)
256 3bz1_X Photosystem II PSBX pro 21.0 48 0.0016 18.6 1.5 14 24-37 10-23 (50)
257 1o5k_A DHDPS, dihydrodipicolin 20.9 1.3E+02 0.0045 22.4 4.6 29 10-38 106-134 (306)
258 2gf0_A GTP-binding protein DI- 20.8 29 0.001 23.0 0.8 50 6-55 74-123 (199)
259 4a5s_A Dipeptidyl peptidase 4 20.8 76 0.0026 26.1 3.4 48 7-55 527-592 (740)
260 1u8z_A RAS-related protein RAL 20.7 66 0.0023 20.2 2.6 47 6-55 70-118 (168)
261 3cpj_B GTP-binding protein YPT 20.6 38 0.0013 23.3 1.4 44 8-54 82-126 (223)
262 2cvl_A TTHA0137, protein trans 20.6 98 0.0034 19.8 3.4 39 82-123 24-62 (124)
263 3mw8_A Uroporphyrinogen-III sy 20.5 1.4E+02 0.0047 20.9 4.5 38 6-53 45-82 (240)
264 1f0y_A HCDH, L-3-hydroxyacyl-C 20.5 1.3E+02 0.0045 21.8 4.5 15 8-22 97-111 (302)
265 3qmv_A Thioesterase, REDJ; alp 20.5 1.3E+02 0.0044 20.8 4.3 49 2-56 67-128 (280)
266 2hdw_A Hypothetical protein PA 20.4 44 0.0015 24.2 1.7 49 5-55 116-179 (367)
267 1v8b_A Adenosylhomocysteinase; 20.4 93 0.0032 25.2 3.8 67 7-79 209-284 (479)
268 2g6b_A RAS-related protein RAB 20.2 45 0.0015 21.5 1.6 45 8-55 80-125 (180)
269 1xhl_A Short-chain dehydrogena 20.2 45 0.0016 24.4 1.8 37 19-59 3-39 (297)
270 1vl8_A Gluconate 5-dehydrogena 20.2 46 0.0016 23.9 1.8 18 42-59 17-34 (267)
271 3nxk_A Cytoplasmic L-asparagin 20.1 2.9E+02 0.01 21.1 6.5 39 11-55 245-283 (334)
272 2gv8_A Monooxygenase; FMO, FAD 20.1 63 0.0022 24.9 2.7 45 10-55 164-221 (447)
273 3nx3_A Acoat, acetylornithine 20.1 1E+02 0.0036 22.8 3.9 65 12-79 124-217 (395)
No 1
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=100.00 E-value=3.1e-36 Score=222.36 Aligned_cols=120 Identities=26% Similarity=0.390 Sum_probs=111.5
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC--CcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCceee
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP--NVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~--~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
..+.++|++||++||+|||||+++||.|||+|||++|+. ++|.|||++++++| |..||.+++.+||++|.++|+.++
T Consensus 59 ~~l~~~i~~aD~~ii~tPeYn~s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~~S~G~~Gg~~a~~~Lr~vl~~lg~~v~ 138 (190)
T 3u7r_A 59 LRLKDRIEHSDAVLAITPEYNRSYPGMIKNAIDWATRPYGQNSWKGKPAAVIGTSPGVIGAALAQARLKNDLLHVGTVMM 138 (190)
T ss_dssp HHHHHHHHTSSEEEEECCCBTTBCCHHHHHHHHHHHCSTTCCTTTTCEEEEEEEESSTTTTHHHHHHHHHHHHTTTCEEC
T ss_pred HHHHHHHHhCCcEEEechhhcccCCHHHHHHHHHhcccccCCccCCCEEEEEEeCCchhhHHHHHHHHHHHHHHcCCEEc
Confidence 457899999999999999999999999999999999853 78999999999999 888999999999999999999999
Q ss_pred ccceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 035766 80 NKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRL 124 (128)
Q Consensus 80 ~~~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~ 124 (128)
+.|+++++.. .+.||++|.++|++++++|++++++|++|+++.
T Consensus 139 ~~p~~~i~~~--~~~fd~~G~l~de~~~~~l~~~~~~~~~~i~~~ 181 (190)
T 3u7r_A 139 SMPEAYIQWH--AEAYAADGSVTDEKTAKFLQGFVDAFVDWIEKH 181 (190)
T ss_dssp CCSCCEEECC--GGGBCTTSCBCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEecc--HhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 8888888764 789999999999999999999999999999874
No 2
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=100.00 E-value=5.1e-32 Score=200.51 Aligned_cols=123 Identities=37% Similarity=0.444 Sum_probs=111.6
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCceeec
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~~~~~ 80 (128)
..+.++|.+||+|||+|||||+++|+.|||+|||+++.+ ..|.|||++++++| |..|+.++..+||+++.++|+.+++
T Consensus 65 ~~~~~~i~~AD~iVi~tP~Y~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg~~g~~~a~~~Lr~il~~lg~~~v~ 144 (199)
T 4hs4_A 65 LTMAQQIATADAVVIVTPEYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGMIGGARAQNHLRQSLVFLDAYVLN 144 (199)
T ss_dssp HHHHHHHHHSSEEEEEECCBTTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSSSSCSHHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHhCCEEEEEcCccCCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCCCcccHHHHHHHHHHHHHcCCEEcC
Confidence 467899999999999999999999999999999998743 58999999999999 6688899999999999999999998
Q ss_pred cceeeeccCCCCCccCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 035766 81 KPEYFLNAFQPPAKFDSD-GNLIDEESKEKLKAVLLALRAFTLRLQGI 127 (128)
Q Consensus 81 ~~~~~i~~~~~~~~fd~~-g~l~~~~~~~~l~~~~~~l~~~~~~~~~~ 127 (128)
.|+++++.. .+.||++ |.+.|++.++++++++++|++|+++++++
T Consensus 145 ~~~v~i~~~--~~~fd~~~g~l~d~~~~~~l~~~~~~l~~~~~~~~~~ 190 (199)
T 4hs4_A 145 RPEAMIGQV--TGKVDAQTLELSDVATREFLARQLDALAALARTLSPR 190 (199)
T ss_dssp SSCEEECSG--GGTBCSSSCCBCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCeEEeech--hhhcCCcCCCcCCHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 778888764 6899985 99999999999999999999999998876
No 3
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=99.97 E-value=6.1e-31 Score=193.79 Aligned_cols=122 Identities=37% Similarity=0.519 Sum_probs=108.1
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCceeec
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~~~~~ 80 (128)
..++++|.+||+|||+|||||+++|+.|||+|||+++.. ..|.|||++++++| |..|+.+++.+||+++.++|+.++|
T Consensus 64 ~~l~~~i~~AD~iv~~sP~y~~~~~~~lK~~iD~~~~~~~~~~~gK~~~~~~~s~g~~gg~~a~~~Lr~~l~~lg~~v~~ 143 (193)
T 3svl_A 64 EALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMN 143 (193)
T ss_dssp HHHHHHHHHSSEEEEEECCBTTBCCHHHHHHHHHHHTSTTCTTTTCEEEEEEECSSTTTTHHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHCCEEEEEecccCCCCCHHHHHHHHHHhhcCccccCCCeEEEEEeCCCCcchHHHHHHHHHHHHHCCCEEcC
Confidence 467899999999999999999999999999999998732 58999999999998 6788899999999999999999998
Q ss_pred cceeeeccCCCCCccCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 035766 81 KPEYFLNAFQPPAKFDSD-GNLIDEESKEKLKAVLLALRAFTLRLQG 126 (128)
Q Consensus 81 ~~~~~i~~~~~~~~fd~~-g~l~~~~~~~~l~~~~~~l~~~~~~~~~ 126 (128)
.|+++++.. .+.||++ |.+.|++.+++|++++++|.+|+++++.
T Consensus 144 ~~~~~~~~~--~~~f~~~~g~l~d~~~~~~l~~~~~~~~~~~~~~~~ 188 (193)
T 3svl_A 144 KPEFMGGVI--QNKVDPQTGEVIDQGTLDHLTGQLTAFGEFIQRVKI 188 (193)
T ss_dssp SSCEEETTG--GGGEETTTTEECCHHHHHHHHHHHHHHHHHTC----
T ss_pred CCeEeecch--hhhcCCCCCcCCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 878887753 6899986 9999999999999999999999987654
No 4
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=99.92 E-value=1.1e-30 Score=193.25 Aligned_cols=123 Identities=38% Similarity=0.468 Sum_probs=110.9
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCceeec
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~~~~~ 80 (128)
..+.++|.+||+|||+|||||+++|+.|||+|||++++. ..|.|||+++++++ |..|+.++..+||.++.++|+.+++
T Consensus 65 ~~~~~~i~~AD~iIi~tP~Y~~s~p~~lK~~iD~l~~~~~~~l~gK~v~~v~tsgg~~g~~~a~~~Lr~~l~~lg~~~v~ 144 (199)
T 3s2y_A 65 LTMAQQIATADAVVIVTPEYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGMIGGARAQYHLRQSLVFLDAYVLN 144 (199)
Confidence 457889999999999999999999999999999998732 27999999999998 6678888999999999999999998
Q ss_pred cceeeeccCCCCCccCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 035766 81 KPEYFLNAFQPPAKFDSD-GNLIDEESKEKLKAVLLALRAFTLRLQGI 127 (128)
Q Consensus 81 ~~~~~i~~~~~~~~fd~~-g~l~~~~~~~~l~~~~~~l~~~~~~~~~~ 127 (128)
.|+++++.. .+.||++ |.+.|++.+++|++++++|.+|+++.+.+
T Consensus 145 ~~~v~i~~~--~~~f~~~~g~l~d~~~~~~l~~~~~~~~~~~~~~~~~ 190 (199)
T 3s2y_A 145 RPEAMIGQV--TGKVDAQTLELSDVATREFLARQLDALAALARTLSPR 190 (199)
Confidence 768888764 7899988 99999999999999999999999987765
No 5
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=99.95 E-value=2.1e-27 Score=181.24 Aligned_cols=123 Identities=17% Similarity=0.195 Sum_probs=108.8
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC---CcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCcee
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP---NVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHF 78 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~---~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~ 78 (128)
+..++++|.+||+|||+||+||+++|+.|||+|||+++.. ..|.|||+++++++|..|+..+..+|+.++.++|+.+
T Consensus 89 ~~~l~~~i~~AD~iI~~sP~Yn~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~tsG~~gg~~a~~~Lr~~l~~lg~~~ 168 (247)
T 2q62_A 89 VQELRELSIWSEGQVWVSPERHGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSGGSQSFNAVNQMRILGRWMRMIT 168 (247)
T ss_dssp HHHHHHHHHHCSEEEEEEECSSSSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEECSSSCCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCCEEEEEeCCCCCCccHHHHHHHHHhhhccCcccccCCCEEEEEEeCCCccHHHHHHHHHHHHHHCCCEE
Confidence 3568899999999999999999999999999999998642 4799999999999976777788999999999999999
Q ss_pred eccceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 035766 79 VNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRLQGI 127 (128)
Q Consensus 79 ~~~~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~~~~ 127 (128)
++. .+.++.. ...|+++|.+.+++.++++++++++|++|+++++..
T Consensus 169 v~~-~v~i~~~--~~~fd~~g~l~d~~~~~~l~~~~~~l~~~~~~l~~~ 214 (247)
T 2q62_A 169 IPN-QSSVAKA--FQEFDANGRMKPSSYYDRVVDVMEELVKFTLLTRDC 214 (247)
T ss_dssp CSC-CEEESSG--GGGBCTTSCBCSSHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eCC-EEEEecc--hhccCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 963 6777653 577999999999999999999999999999998753
No 6
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=99.95 E-value=1.7e-27 Score=184.79 Aligned_cols=123 Identities=15% Similarity=0.095 Sum_probs=109.3
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC---CcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCcee
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP---NVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHF 78 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~---~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~ 78 (128)
+..++++|.+||+|||+|||||+++|+.|||+|||+++.. ..|.|||+++++++|+.|+.++..+|+.++.++|+.+
T Consensus 114 v~~l~e~I~~ADgiV~aSP~Yn~sipg~LKn~IDrl~~~~g~~~~l~gK~v~lv~tsG~~gg~~a~~~Lr~~l~~lg~~v 193 (279)
T 2fzv_A 114 VKELRALSEWSEGQVWCSPERHGQITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVSGGSQSFNAVNTLRLLGRWMRMFT 193 (279)
T ss_dssp HHHHHHHHHHCSEEEEEEEEETTEECHHHHHHHHHSCSCBTTBCSSTTCEEEEEEECSSSCCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCCeEEEEcCccccCcCHHHHHHHHHHhhhcccccccCCCEEEEEEECCCccHHHHHHHHHHHHHhcCcEE
Confidence 4568899999999999999999999999999999998642 4799999999999976777788999999999999999
Q ss_pred eccceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 035766 79 VNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRLQGI 127 (128)
Q Consensus 79 ~~~~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~~~~ 127 (128)
+|. .+.++.. .+.||++|.+.|++..+++++++++|++|+++++..
T Consensus 194 v~~-~v~v~~~--~~~fd~~G~l~d~~~~~~l~~~~~~l~~~~~~l~~~ 239 (279)
T 2fzv_A 194 IPN-QSSIAKA--FQEFDAAGRMKPSPYYDRIADVMEELVRFTALVRPH 239 (279)
T ss_dssp CSC-CEEETTG--GGTBCTTSCBCSSHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred eCC-EEEEecc--ccccCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 974 6777643 577999999999999999999999999999998764
No 7
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=99.93 E-value=2.1e-26 Score=168.86 Aligned_cols=119 Identities=22% Similarity=0.304 Sum_probs=99.7
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC--------CcCCCCeEEEEeecCCCChHHHHHHHHHhhhhc
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP--------NVWADKAAAIVSAAGGSGGARAQYHLRQIGVYL 74 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~--------~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~ 74 (128)
..+.++|.+||+|||+||+||+++|+.|||+|||+.+.. ..|.|||+++++++|+.|+..+..+|+.++.++
T Consensus 59 ~~~~~~i~~AD~iV~~sP~y~~~~p~~lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg~g~~~~~~~l~~~l~~~ 138 (192)
T 3fvw_A 59 AHAREEVQEADAIWIFSPVYNYAIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGASPEEVFEDYRSLLPFI 138 (192)
T ss_dssp HHHHHHHHHCSEEEEECCCBTTBCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC---CCSHHHHHHHHHT
T ss_pred HHHHHHHHhCCEEEEECcccccCCCHHHHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCCcchhHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999998632 469999999999996667777889999999999
Q ss_pred CceeeccceeeeccCCCCCccCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhh
Q 035766 75 DLHFVNKPEYFLNAFQPPAKFDSDGNLI-DEESKEKLKAVLLALRAFTLRLQ 125 (128)
Q Consensus 75 g~~~~~~~~~~i~~~~~~~~fd~~g~l~-~~~~~~~l~~~~~~l~~~~~~~~ 125 (128)
|+.+++. .+.++. ..+.|+ +|.+. +++.++++++++++|+++++++.
T Consensus 139 G~~~v~~-~v~~~~--~~~~f~-~g~~~~~~~~~~~l~~~~~~l~~~~~~~~ 186 (192)
T 3fvw_A 139 RMHLVDQ-LTGVPI--NSEAWS-TGILKVSAEKLAELSAQADALLSAIENLE 186 (192)
T ss_dssp TCEECCC-CEEECC--CTTHHH-HCCCCCCHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCeeecc-eeeccc--chhhcc-CCccccCHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999963 555554 267897 88886 99999999999999999987653
No 8
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=99.93 E-value=4e-26 Score=164.06 Aligned_cols=116 Identities=25% Similarity=0.334 Sum_probs=100.1
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCceeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~~~~~ 80 (128)
+..+.+++.+||+|||+||+||+++|+.|||+|||+++ ..|.|||+++++++ |..|+.++..+||+++..+|+.+++
T Consensus 54 ~~~~~~~i~~aD~ii~~tP~y~~~~p~~lk~~lD~l~~--~~~~gK~~~~~~~sgg~~g~~~a~~~l~~~l~~~g~~~v~ 131 (174)
T 3gfs_A 54 VQELKQRVTKADAIVLLSPEYHSGMSGALKNALDFLSS--EQFKYKPVALLAVAGGGDGGINALNNMRTVMRGVYANVIP 131 (174)
T ss_dssp HHHHHHHHHHCSSEEEEEECSSSSCCHHHHHHHHTCCH--HHHTTCEEEEEEECCSTTCSHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCEEEEEcCCcCCCCCHHHHHHHHHhCH--hhhCCCcEEEEEECCCChhHHHHHHHHHHHHHHcCCEEec
Confidence 35678899999999999999999999999999999986 58999999999988 6678889999999999999999997
Q ss_pred cceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 035766 81 KPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRL 124 (128)
Q Consensus 81 ~~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~ 124 (128)
. .+.++ ...||+++...+++.++++++++++|.+|+++=
T Consensus 132 ~-~v~i~----~~~f~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 170 (174)
T 3gfs_A 132 K-QLVLK----PVHIDVENATVAENIKESIKELVEELSMFAKAG 170 (174)
T ss_dssp E-EEEEC----GGGEETTTTEECHHHHHHHHHHHHHHHHHHHC-
T ss_pred c-eEEec----hhhcCCCCCccCHHHHHHHHHHHHHHHHHHHcC
Confidence 4 56665 356885444446889999999999999998753
No 9
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=99.93 E-value=9.8e-26 Score=166.10 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=97.6
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHH-HHHhhhhcCceeecc
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYH-LRQIGVYLDLHFVNK 81 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~-L~~~l~~~g~~~~~~ 81 (128)
..++++|.+||+|||+||+||+++|+.|||+|||+++ ..|.|||+++++++|..++..+.++ |+.++.++|+.++|.
T Consensus 77 ~~~~~~i~~AD~ivi~sP~Y~~~~~~~lK~~iD~~~~--~~l~gK~~~~v~t~G~~~~~~~~~~~L~~il~~lg~~vv~~ 154 (191)
T 3k1y_A 77 EEITSALSASDGLVVATPVFKASYTGLFKMFFDILDT--DALTGMPTIIAATAGSARHSLVLDYALRPLLSYMRAVVVPT 154 (191)
T ss_dssp HHHHHHHHHCSEEEEEEECBTTBSCHHHHHHHHHSCT--TTTTTCEEEEEEEESSSTTTTHHHHTHHHHHHHTTCEECSC
T ss_pred HHHHHHHHHCCEEEEEcCccCCcCcHHHHHHHHHhhh--hhcCCCEEEEEEeCCCcchhhHHHHHHHHHHHHCCCEEcCc
Confidence 4688999999999999999999999999999999987 6999999999999876666555555 999999999999974
Q ss_pred ceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 035766 82 PEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRLQ 125 (128)
Q Consensus 82 ~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~~ 125 (128)
.+++. .+.|+++ .++++++++++++++|+.++++-+
T Consensus 155 -~v~~~----~~~f~~~---~~~~~~~rl~~~~~~~~~~~~~~~ 190 (191)
T 3k1y_A 155 -GVFAA----TEDFGGP---EGAEFNKRIARAAGELASLIVEES 190 (191)
T ss_dssp -CEEEE----GGGCSHH---HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred -EEEec----hhhcCCC---CCHHHHHHHHHHHHHHHHHHHhcC
Confidence 67665 3678754 368999999999999999997643
No 10
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=99.92 E-value=2.8e-24 Score=156.52 Aligned_cols=120 Identities=39% Similarity=0.582 Sum_probs=101.4
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCceeec
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~~~~~ 80 (128)
..+++++.+||+|||+||+||+++|+.|||+|||+.+.. ..|.|||+++++++ |..|+..+..+|+.++.++|+.+++
T Consensus 64 ~~~~~~l~~aD~ii~~sP~y~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~gg~~g~~~~~~~l~~~l~~~g~~~~~ 143 (193)
T 1rtt_A 64 ERFREQIRAADALLFATPEYNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAGRFGTARAQYHLRQTLVFLDVHPLN 143 (193)
T ss_dssp HHHHHHHHHCSEEEEECCEETTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSSTTTTHHHHHHHHHHHHHHTCEECC
T ss_pred HHHHHHHHhCCEEEEEccccccCcCHHHHHHHHHhccccCcccCCCeEEEEEeCCCCCccHHHHHHHHHHHHHcCCEEcC
Confidence 456789999999999999999999999999999998521 25899999999999 6677778899999999999999996
Q ss_pred cceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 035766 81 KPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRL 124 (128)
Q Consensus 81 ~~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~ 124 (128)
.|.+.+... .+.|+++|.+.+++.++++++++++|.+++++.
T Consensus 144 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 185 (193)
T 1rtt_A 144 KPEVMISSA--QNAFDAQGRLLDDKARELIQQQLQALQLWVREG 185 (193)
T ss_dssp SSCEEECSG--GGTBCSTTCBCCHHHHHHHHHHHHHHHC-----
T ss_pred CCeEEecch--HhhcCcCCCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 546777653 678998999999999999999999999998764
No 11
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=99.89 E-value=3.7e-23 Score=151.46 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=95.5
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHH-HHHHhhhhcCceeecc
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQY-HLRQIGVYLDLHFVNK 81 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~-~L~~~l~~~g~~~~~~ 81 (128)
..+.+++.+||+|||+||+||+++|+.|||+|||+.+ ..|.|||+++++++|..|+..+.. +|+.++..+|+.+++.
T Consensus 61 ~~~~~~i~~aD~ii~~sP~y~~~~p~~lK~~ld~l~~--~~~~gK~~~~~~tgg~~~~~~a~~~~l~~~l~~~g~~~v~~ 138 (197)
T 2vzf_A 61 KEAVDATCNADGLIVATPIYKASYTGLLKAFLDILPQ--FALAGKAALPLATGGSPAHVLALDYGLRPVLHSMGVRHVVQ 138 (197)
T ss_dssp HHHHHHHHHCSEEEEEEECBTTBCCHHHHHHHTTSCT--TTTTTCEEEEEEEESSGGGGGHHHHTHHHHHHTTTCSEECC
T ss_pred HHHHHHHHHCCEEEEEeCccCCCCCHHHHHHHHhccc--cccCCCEEEEEEECCCcchhhHHHHHHHHHHHHcCCEeccc
Confidence 3567899999999999999999999999999999976 589999999999986666666675 7999999999999974
Q ss_pred ceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 035766 82 PEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRL 124 (128)
Q Consensus 82 ~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~ 124 (128)
.+.++.. ...|+++|...+++.++++++++++|.+++++.
T Consensus 139 -~v~~~~~--~~~~~~~g~~~d~~~~~~l~~~~~~l~~~i~~~ 178 (197)
T 2vzf_A 139 -SFFLVQS--QFSVVDGKLAVEDDVASQLNNAIDHFRLSLSSE 178 (197)
T ss_dssp -CEEEESC--CC-----CCCSCHHHHHHHHHHHHHHHHTCCCC
T ss_pred -eEEEech--hhcccCCCCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 5666542 456888888789999999999999999876544
No 12
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=99.84 E-value=1.2e-20 Score=136.69 Aligned_cols=110 Identities=19% Similarity=0.187 Sum_probs=84.8
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeeccc
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNKP 82 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~~ 82 (128)
..+.+++.+||+|||+||+||+++|+.|||+|||+.. .|.|||+++++++ +.++..+..+|+.++.++|+.+++
T Consensus 76 ~~~~~~l~~aD~iI~~sP~y~~~~p~~lK~~iD~~~~---~l~gK~~~~~~~G-~~~~~~~~~~l~~~l~~~G~~~~~-- 149 (191)
T 1t0i_A 76 RSWSRIVNALDIIVFVTPQYNWGYPAALKNAIDRLYH---EWHGKPALVVSYG-GHGGSKCNDQLQEVLHGLKMNVIG-- 149 (191)
T ss_dssp HHHHHHHHTCSEEEEEEECBTTBCCHHHHHHHHTCST---TTTTCEEEEEEEE-TTTTHHHHHHHHHHHHHTTCEEEE--
T ss_pred HHHHHHHHhCCEEEEEeceECCCCCHHHHHHHHHHHh---hcCCCEEEEEEeC-CcchhhHHHHHHHHHHHCCCEEcc--
Confidence 4578999999999999999999999999999999974 7999999999764 455677889999999999999985
Q ss_pred eeeeccCCCC----CccCCCCCCCCHHHHHHHHHHHHHHH
Q 035766 83 EYFLNAFQPP----AKFDSDGNLIDEESKEKLKAVLLALR 118 (128)
Q Consensus 83 ~~~i~~~~~~----~~fd~~g~l~~~~~~~~l~~~~~~l~ 118 (128)
.+.+...... +.++++|++.++.++++|+.+++.|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 189 (191)
T 1t0i_A 150 GVAVKIPVGTIPLPEDIVPQLSVHNEEILQLLASCIETTR 189 (191)
T ss_dssp EEEEECCTTCSSCCTTTSGGGGGGHHHHHHHHHHHC----
T ss_pred eeEEEccccccccchhhhHHHHHhHHHHHHHHHHHHHHHh
Confidence 3444432112 22345777777788888877776653
No 13
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=99.72 E-value=6.8e-17 Score=118.25 Aligned_cols=82 Identities=17% Similarity=0.150 Sum_probs=67.9
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-----------CcCCCCeEEEEeec-CCCCh-HHHHHHHHHh
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-----------NVWADKAAAIVSAA-GGSGG-ARAQYHLRQI 70 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-----------~~~~~Kp~~~v~~s-g~~gg-~~a~~~L~~~ 70 (128)
.+.++|.+||+|||+||+||+++|+.||++|||+.+++ +.+.||++++++++ |.+++ ..+..+|+.+
T Consensus 87 ~~~~~l~~aD~iv~~~P~y~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~l~~~ 166 (208)
T 2hpv_A 87 ELTDQFLSADKVVIANPMWNLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFASQYIKAI 166 (208)
T ss_dssp HHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESSCCCSCSHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEeccccCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCCCCCCcchHHHHHHHH
Confidence 36789999999999999999999999999999997632 24799999999988 44443 5677899999
Q ss_pred hhhcCceeeccceeeec
Q 035766 71 GVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 71 l~~~g~~~~~~~~~~i~ 87 (128)
+.++|+.+++ .+.+.
T Consensus 167 ~~~~G~~~~~--~~~~~ 181 (208)
T 2hpv_A 167 LNFIGVDQVD--GLFIE 181 (208)
T ss_dssp HHHTTCCEEE--EEEEE
T ss_pred HHhCCCCeee--EEEEc
Confidence 9999999884 45444
No 14
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=99.72 E-value=3.2e-17 Score=121.54 Aligned_cols=82 Identities=18% Similarity=0.168 Sum_probs=67.5
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-----------CcCCCCeEEEEeec-CCCCh------HHHHH
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-----------NVWADKAAAIVSAA-GGSGG------ARAQY 65 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-----------~~~~~Kp~~~v~~s-g~~gg------~~a~~ 65 (128)
.+.++|.+||+|||+||+||+++|+.|||+|||+.+++ +.+.||++.+++++ |.+++ ..+..
T Consensus 85 ~~~~~~~~aD~iv~~~P~y~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~~~~~~~~~~~~~~ 164 (211)
T 3p0r_A 85 KYLNQFLEADKVVFGFPLWNLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVK 164 (211)
T ss_dssp HHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCCSSSTTGGGCBSHH
T ss_pred HHHHHHHhCCEEEEEcChhcccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCCCCCCccchhHHHH
Confidence 46789999999999999999999999999999997642 35899999999998 54432 23467
Q ss_pred HHHHhhhhcCceeeccceeeec
Q 035766 66 HLRQIGVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 66 ~L~~~l~~~g~~~~~~~~~~i~ 87 (128)
+|+.+|.++|+..+. .+.+.
T Consensus 165 ~l~~~l~~~G~~~v~--~i~~~ 184 (211)
T 3p0r_A 165 YVASMMGFFGATNME--TVVIE 184 (211)
T ss_dssp HHHHHHHHTTCCSCE--EEEEE
T ss_pred HHHHHHHhCCCCeee--EEEEe
Confidence 899999999999873 45444
No 15
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=99.71 E-value=6.3e-17 Score=119.30 Aligned_cols=82 Identities=22% Similarity=0.197 Sum_probs=66.3
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC---------------CcCCCCeEEEEeecC--C-CCh-----
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP---------------NVWADKAAAIVSAAG--G-SGG----- 60 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~---------------~~~~~Kp~~~v~~sg--~-~gg----- 60 (128)
.+.++|.+||+|||+||+||+++|+.|||+|||+.+++ +.+.||++.+++++| + +++
T Consensus 80 ~~~~~l~~AD~iV~~~P~y~~~~pa~lK~~iD~~~~~g~~f~~~~~~g~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~ 159 (212)
T 3r6w_A 80 QLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQA 159 (212)
T ss_dssp HHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHCCBTTTEEEEECC-CEEEEECCCSCEEEEEEECSSSCCSTTCTTGG
T ss_pred HHHHHHHhCCEEEEEcCcccccCCHHHHHHHHHHhhCCceeecccCCCCccccccCCCCEEEEEEecCCCCcCCCCCCCc
Confidence 46789999999999999999999999999999996531 268999999999986 2 111
Q ss_pred -HHHHHHHHHhhhhcCceeeccceeeec
Q 035766 61 -ARAQYHLRQIGVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 61 -~~a~~~L~~~l~~~g~~~~~~~~~~i~ 87 (128)
.....+|+.++.++|+..++ .+.+.
T Consensus 160 ~~~~~~~l~~~l~~~G~~~~~--~v~~~ 185 (212)
T 3r6w_A 160 MNHADPWLRTALGFIGIDEVT--VVAAE 185 (212)
T ss_dssp GCCSHHHHHHHHHHHTCCEEE--EEEEC
T ss_pred hhhhHHHHHHHHHHCCCceeE--EEEEe
Confidence 12457899999999999883 44443
No 16
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=99.71 E-value=7.8e-17 Score=121.06 Aligned_cols=107 Identities=14% Similarity=0.100 Sum_probs=82.6
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC--CcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeec
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP--NVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~--~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~ 80 (128)
..+.++|.+||+|||+||+||+++|+.||++|||+.+.. ..+.||++++++++|..|...+..+|+.++.++|+.+++
T Consensus 71 ~~~~~~l~~AD~iI~~sP~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g~~g~~~~~~~l~~~l~~~G~~~v~ 150 (242)
T 1sqs_A 71 GVIKKELLESDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNGSDNVSEYLRDIFSYMGGQILH 150 (242)
T ss_dssp HHHHHHHHHCSEEEEEEEECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEESSCCSCCHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHCCEEEEEccccccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCCCCchhhHHHHHHHHHHHCCCeeee
Confidence 457789999999999999999999999999999996421 368999999999986555557788999999999999884
Q ss_pred cceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 035766 81 KPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLR 123 (128)
Q Consensus 81 ~~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~ 123 (128)
.+.+. ...+ ++..++++++.++|.+.++.
T Consensus 151 --~~~~~-----~~~~-------~~~~~~~~~~~~~la~~i~~ 179 (242)
T 1sqs_A 151 --QVSIT-----NSLK-------DIAEAQLMEATYKIEDVLEG 179 (242)
T ss_dssp --EEEEE-----GGGG-------GGHHHHHHHHHHHHHHHHTT
T ss_pred --EEEEe-----ccCC-------hHHHHHHHHHHHHHHHHHhc
Confidence 34331 1111 24667777777777766543
No 17
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=99.70 E-value=7.3e-17 Score=116.75 Aligned_cols=77 Identities=17% Similarity=0.190 Sum_probs=65.6
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-----------CcCCCCeEEEEeecCC-CChHH---HHHHHH
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-----------NVWADKAAAIVSAAGG-SGGAR---AQYHLR 68 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-----------~~~~~Kp~~~v~~sg~-~gg~~---a~~~L~ 68 (128)
.+.+++.+||+|||+||+||+++|+.||++||++.++. ..+.||++++++++|+ +++.. +..+|+
T Consensus 79 ~~~~~l~~aD~iv~~~P~y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~~l~ 158 (201)
T 1t5b_A 79 ELIAELKAHDVIVIAAPMYNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLK 158 (201)
T ss_dssp HHHHHHHHCSEEEEECCCBTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCCTTSTTCCHHHHHH
T ss_pred HHHHHHHhCCEEEEEeCcccCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCCCCCchhhHHHHHH
Confidence 46789999999999999999999999999999998532 2589999999999844 45433 778899
Q ss_pred HhhhhcCceeec
Q 035766 69 QIGVYLDLHFVN 80 (128)
Q Consensus 69 ~~l~~~g~~~~~ 80 (128)
.++.++|+.+++
T Consensus 159 ~~l~~~G~~~~~ 170 (201)
T 1t5b_A 159 VFLGFIGITDVN 170 (201)
T ss_dssp HHHHHTTCCCEE
T ss_pred HHHhhcCcceeE
Confidence 999999999883
No 18
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=99.70 E-value=3e-16 Score=113.85 Aligned_cols=120 Identities=13% Similarity=0.075 Sum_probs=89.9
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCC--CCcCCCCeEEEEeecCC-CCh-HHHHHHHHHhhhhcCceeecc
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRP--PNVWADKAAAIVSAAGG-SGG-ARAQYHLRQIGVYLDLHFVNK 81 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~--~~~~~~Kp~~~v~~sg~-~gg-~~a~~~L~~~l~~~g~~~~~~ 81 (128)
.+++.+||+|||+||+|++++|+.||++||++.+. ...+.||++++++++|. .|+ ..+..+|+.++..+|+.+++.
T Consensus 65 ~~~l~~aD~ii~gsP~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~~~~ 144 (199)
T 2zki_A 65 LDDMRWADGFAIGSPTRYGNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMIIVPI 144 (199)
T ss_dssp HHHHHHCSEEEEEEECBTTBCCHHHHHHHHTTHHHHHTTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEECCC
T ss_pred HHHHHhCCEEEEECCccccCccHHHHHHHHHhhhcccccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEEeCC
Confidence 67899999999999999999999999999998421 14689999999998844 344 467889999999999999853
Q ss_pred ceeeecc----CCCCCccCCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhc
Q 035766 82 PEYFLNA----FQPPAKFDSDGN----LIDEESKEKLKAVLLALRAFTLRLQG 126 (128)
Q Consensus 82 ~~~~i~~----~~~~~~fd~~g~----l~~~~~~~~l~~~~~~l~~~~~~~~~ 126 (128)
+ ...+. ......|+.... ..+++..++++++.+++.+.+++++.
T Consensus 145 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~l~~~~~~l~~ 196 (199)
T 2zki_A 145 G-YGIPELFQTTTGGGPYGATHLGSKEELDEMERKIARFQGKRITEVAKAIKC 196 (199)
T ss_dssp T-TCSTHHHHCSSSCCSSCCCCBSSCSSCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred C-cCCccccccccCCCCcceeeecCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2 11000 000123332211 44788999999999999999988863
No 19
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=99.69 E-value=2.4e-16 Score=118.14 Aligned_cols=82 Identities=11% Similarity=0.062 Sum_probs=67.5
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-----------CcC-CCCeEEEEeec-CCCCh--H-----HH
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-----------NVW-ADKAAAIVSAA-GGSGG--A-----RA 63 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-----------~~~-~~Kp~~~v~~s-g~~gg--~-----~a 63 (128)
.+.++|.+||+|||++|+||+++|+.|||+|||+.+++ +.+ .||++.+++++ |.+++ . .+
T Consensus 87 ~l~~~~~~aD~iv~~~P~y~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~~~~~~~~~~~~~~ 166 (223)
T 3u7i_A 87 EILQQFKSANTYVIVLPLHNFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYTDVEYS 166 (223)
T ss_dssp HHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSCCSSSSHHHHTCHH
T ss_pred HHHHHHHhCCEEEEEcChhhccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCCCCCCCccchHHHH
Confidence 47899999999999999999999999999999998753 246 89999999998 54432 1 35
Q ss_pred HHHHHHhhhhcCceeeccceeeec
Q 035766 64 QYHLRQIGVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 64 ~~~L~~~l~~~g~~~~~~~~~~i~ 87 (128)
..+|+.++.++|+..+. .+.+.
T Consensus 167 ~~~l~~~l~~~G~~~~~--~i~~~ 188 (223)
T 3u7i_A 167 HKYLKAMFNFLGIEDYQ--IVRAQ 188 (223)
T ss_dssp HHHHHHHHHHHTCCEEE--EEEEC
T ss_pred HHHHHHHHHHCCCceeE--EEEEc
Confidence 67899999999999883 45444
No 20
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=99.69 E-value=4.1e-16 Score=114.27 Aligned_cols=81 Identities=15% Similarity=-0.051 Sum_probs=66.8
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-----------CcCCCCeEEEEeecCCC--------ChHHH
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-----------NVWADKAAAIVSAAGGS--------GGARA 63 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-----------~~~~~Kp~~~v~~sg~~--------gg~~a 63 (128)
..+.++|.+||+|||+||+||+++|+.|||+|||+.+++ +.+.||++.+++++|+. +..
T Consensus 65 ~~~~~~l~~AD~iV~~~P~y~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~y~~~~~~~~-- 142 (196)
T 3lcm_A 65 EKYRDLVTWADHLIFIFPIWWSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNTPSFAMPFVQDYG-- 142 (196)
T ss_dssp HHHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSSCGGGTTTSSCTT--
T ss_pred HHHHHHHHhCCEEEEECchhhccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCCchhhHhhhccCH--
Confidence 357889999999999999999999999999999997642 36899999999999432 122
Q ss_pred HHHHHHhhhhcCceeeccceeeec
Q 035766 64 QYHLRQIGVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 64 ~~~L~~~l~~~g~~~~~~~~~~i~ 87 (128)
..+++.++.++|+..++ .+.+.
T Consensus 143 ~~~l~~~l~~~G~~~~~--~~~~~ 164 (196)
T 3lcm_A 143 KVLKKQILKPCAISPVK--LTELT 164 (196)
T ss_dssp HHHHHHTTGGGTCCCEE--EEEEC
T ss_pred HHHHHHHHHhcCCceee--EEEEe
Confidence 37899999999999884 45443
No 21
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=99.69 E-value=5.6e-16 Score=112.15 Aligned_cols=119 Identities=18% Similarity=0.165 Sum_probs=89.0
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCC--CCcCCCCeEEEEeecCC-CChH-HHHHHHHHhhhhcCceeecc
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRP--PNVWADKAAAIVSAAGG-SGGA-RAQYHLRQIGVYLDLHFVNK 81 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~--~~~~~~Kp~~~v~~sg~-~gg~-~a~~~L~~~l~~~g~~~~~~ 81 (128)
.+++.+||+|||+||+||+++|+.+|++||++... ...|.||++++++++|. .|+. .+..+|+..+..+|+.+++.
T Consensus 66 ~~~l~~aD~ii~gsP~y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~~~~ 145 (200)
T 2a5l_A 66 LEDLKNCAGLALGSPTRFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLGI 145 (200)
T ss_dssp HHHHHTCSEEEEEEECBTTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHCCEEEEEcChhccCccHHHHHHHHHHHHHhhccccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEEECC
Confidence 68899999999999999999999999999999631 02589999999999854 3554 68889999999999999853
Q ss_pred ceee---------eccCCCCCccC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHhh
Q 035766 82 PEYF---------LNAFQPPAKFD-SDGN-LIDEESKEKLKAVLLALRAFTLRLQ 125 (128)
Q Consensus 82 ~~~~---------i~~~~~~~~fd-~~g~-l~~~~~~~~l~~~~~~l~~~~~~~~ 125 (128)
+ +. .+.......+. .++. ..+++..++++++.+++.+.+++++
T Consensus 146 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~a~~~g~~l~~~~~~~~ 199 (200)
T 2a5l_A 146 P-YSEPALLETRGGGTPYGASHFAGADGKRSLDEHELTLCRALGKRLAETAGKLG 199 (200)
T ss_dssp C-C------------CTTSBCCBCCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCccccccccCCCCcceeeeeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 2 21 01100011221 1222 3378899999999999999988875
No 22
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=99.65 E-value=1.4e-16 Score=113.92 Aligned_cols=105 Identities=16% Similarity=0.131 Sum_probs=77.3
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC---------CcCCCCeEEEEeecCCC---ChHHHHHHHHHh
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP---------NVWADKAAAIVSAAGGS---GGARAQYHLRQI 70 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~---------~~~~~Kp~~~v~~sg~~---gg~~a~~~L~~~ 70 (128)
..+.+++.+||+|||+||+||+++|+.||++||++.+.. ..+.||++++++++|.. ++..+..+|+.+
T Consensus 63 ~~~~~~l~~aD~ii~~~P~y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~l~~~ 142 (184)
T 1rli_A 63 DSIIERILQCHILIFATPIYWFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDNPKIKGLPLIQQFEHI 142 (184)
T ss_dssp HHHHHHHHTCSEEEEEEECBTTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSCHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEeCccccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCCCccchHHHHHHHHHH
Confidence 346789999999999999999999999999999985321 25789999999998543 456778999999
Q ss_pred hhhcCceeeccceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHH
Q 035766 71 GVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLL 115 (128)
Q Consensus 71 l~~~g~~~~~~~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~ 115 (128)
+.++|+.++. .+.... ........+++..++++++.+
T Consensus 143 l~~~G~~~~~--~~~~~g------~~~~~~~~~~~~l~~a~~lg~ 179 (184)
T 1rli_A 143 FHFMGMSFKG--YVLGEG------NRPGDILRDHQALSAASRLLK 179 (184)
T ss_dssp HHHHTCEEEE--EEEEEC------SSTTGGGGCHHHHHHHHHTTC
T ss_pred HHHcCCccce--EEEEcc------CCcchhhcCHHHHHHHHHhhh
Confidence 9999999884 343321 111111235666666665544
No 23
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=99.64 E-value=1.2e-15 Score=111.89 Aligned_cols=120 Identities=10% Similarity=0.039 Sum_probs=89.2
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCC--CCcCCCCeEEEEeecCC-CCh-HHHHHHHHHhhhhcCceeec
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRP--PNVWADKAAAIVSAAGG-SGG-ARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~--~~~~~~Kp~~~v~~sg~-~gg-~~a~~~L~~~l~~~g~~~~~ 80 (128)
+.+++.+||+|||+||+||+++|+.||++||++... ...+.||++++++++|. .++ ..+...|+..+..+|+.+++
T Consensus 72 ~~~~l~~aD~ii~gsP~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~v~ 151 (211)
T 1ydg_A 72 TPADLEWAEAIVFSSPTRFGGATSQMRAFIDTLGGLWSSGKLANKTFSAMTSAQNVNGGQETTLQTLYMTAMHWGAVLTP 151 (211)
T ss_dssp CHHHHHHCSEEEEEEEEETTEECHHHHHHHHTTHHHHHTTTTTTCEEEEEEEESSTTSSTTHHHHHHHHHHHTTTCEECC
T ss_pred HHHHHHHCCEEEEEcCccccCccHHHHHHHHHhccccccccCCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHCCCEEeC
Confidence 568899999999999999999999999999998521 14689999999998844 434 47888999999999999985
Q ss_pred ccee---eeccCCCCCccCCC---C-CCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 035766 81 KPEY---FLNAFQPPAKFDSD---G-NLIDEESKEKLKAVLLALRAFTLRLQG 126 (128)
Q Consensus 81 ~~~~---~i~~~~~~~~fd~~---g-~l~~~~~~~~l~~~~~~l~~~~~~~~~ 126 (128)
.+.. .+.. ....+... + ...+++..++++++.+++.+.+++++.
T Consensus 152 ~~~~~~~~~~~--~~~~~g~~~~~~~~~p~~~~~~~a~~~g~~l~~~~~~~~~ 202 (211)
T 1ydg_A 152 PGYTDEVIFKS--GGNPYGASVTANGQPLLENDRASIRHQVRRQVELTAKLLE 202 (211)
T ss_dssp CTTCSHHHHHT--TCCSSSCEEECCSSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChhhccC--CCCCccceeecCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3211 0110 01222211 1 223788999999999999999888764
No 24
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=99.63 E-value=4.4e-15 Score=109.59 Aligned_cols=77 Identities=10% Similarity=-0.049 Sum_probs=61.4
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhc------------C----------CCCcCCCCeEEEEeecCCCCh-
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWAS------------R----------PPNVWADKAAAIVSAAGGSGG- 60 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~------------~----------~~~~~~~Kp~~~v~~sg~~gg- 60 (128)
.+.++|.+||+|||+||+||+++|+.|||+||++. + +.+.+.||++++++++|....
T Consensus 63 ~~~~~l~~AD~iV~~~P~y~~s~pa~LK~~iDrv~~~g~~~~y~~~~~~~~~~~~~~g~~~~l~gK~~~~i~t~g~~~~~ 142 (204)
T 2amj_A 63 AEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEA 142 (204)
T ss_dssp HHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHHHHTBTTTBSSSCC-------CTTCCBSCTTCEEEEEEECSSCTHH
T ss_pred HHHHHHHhCCEEEEECCccccCCCHHHHHHHHHHhhcCcceeeccCcccccccccccCcccccCCCeEEEEEeCCCChHH
Confidence 46899999999999999999999999999999642 1 124689999999999844211
Q ss_pred ------------H-HHHHHHHHhhhhcCceeec
Q 035766 61 ------------A-RAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 61 ------------~-~a~~~L~~~l~~~g~~~~~ 80 (128)
. .....|+.++.++|+..++
T Consensus 143 y~~~g~~~~~~~~~~~l~~l~~~l~~~G~~~~~ 175 (204)
T 2amj_A 143 FTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLP 175 (204)
T ss_dssp HHCTTSSSCSCCHHHHTHHHHHHHHHTTCEECC
T ss_pred HccCcccccCCCHHHHHHHHHHHHHHcCCeecc
Confidence 1 2334588999999999984
No 25
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=99.63 E-value=1.6e-15 Score=122.72 Aligned_cols=110 Identities=12% Similarity=0.008 Sum_probs=86.0
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-------CcCCCCeEEEEeecCC-CChH---------HHHHH
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-------NVWADKAAAIVSAAGG-SGGA---------RAQYH 66 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-------~~~~~Kp~~~v~~sg~-~gg~---------~a~~~ 66 (128)
...++|.+||+|||++|+||+++|+.||++||++.+++ ..|.||++.++.++|+ .+.. ....+
T Consensus 285 ~~~~~l~~aD~iv~~~P~yw~~~Pa~lK~~iDrv~~~g~~y~~~~~~l~gK~~~~~~t~g~~~~~y~~~~~~~~~~~l~~ 364 (413)
T 3l9w_A 285 AEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQP 364 (413)
T ss_dssp HHHHHHHTCSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBSTTCCTTTTCEEEEEEECSSCGGGGCCSSSCSGGGGGHH
T ss_pred HHHHHHHhCCEEEEECchhhccCCHHHHHHHHHHHhcCceecCCCCccccceEEEEEeCCCChHhhCCCCccCchHHHHH
Confidence 46789999999999999999999999999999997542 3689999999999843 2111 13468
Q ss_pred HHHhhhhcCceeeccceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 035766 67 LRQIGVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRL 124 (128)
Q Consensus 67 L~~~l~~~g~~~~~~~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~ 124 (128)
++.++.++|+..++ .+.+.. . +.+.+++.++.+++..+.|..|+++-
T Consensus 365 l~~~~~~~G~~~l~--~~~~~g-----~----~~~~d~~~~~~~~~~~~~L~~~~~~~ 411 (413)
T 3l9w_A 365 LQATAIYCGLNWLP--PFAMHC-----T----FICDDETLEGQARHYKQRLLEWQEAH 411 (413)
T ss_dssp HHHHHHHTTCEECC--CEEECC-----S----TTCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCeecc--eEEEcC-----C----CCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 89999999999985 344432 1 23446788899999999999988653
No 26
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=99.63 E-value=1.1e-14 Score=107.17 Aligned_cols=112 Identities=9% Similarity=0.060 Sum_probs=76.1
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-------CcCCCCeEEEEeecCCC------Ch-----H-HHH
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-------NVWADKAAAIVSAAGGS------GG-----A-RAQ 64 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-------~~~~~Kp~~~v~~sg~~------gg-----~-~a~ 64 (128)
...+++.+||+|||++|+||+++|+.||++||++.+.+ +.+.||++.++.++|+. +| . ...
T Consensus 51 ~~~~~l~~AD~iv~~~P~y~~~~pa~lK~~iDrv~~~g~~y~~~g~~l~gK~~~~~~t~G~~~~~y~~~g~~~~~~~~~l 130 (192)
T 3f2v_A 51 AEQKLIETHDSLVWQFPIYWFNCPPLLKQWLDEVLTYGWAYGSKGKALKGRKIALAVSLGAPAADYRADGAVGCSVAEVL 130 (192)
T ss_dssp HHHHHHHTSSSEEEEEECBTTBCCHHHHHHHHHHSCBTTTBSSSCCSSTTCEEEEEEEESSCGGGSSTTSSSCSCHHHHH
T ss_pred HHHHHHHhCCEEEEEcChhhcCCCHHHHHHHHHHhhcCccccCCCCCCCCCEEEEEEeCCCChHhhccCCccccCHHHHH
Confidence 46789999999999999999999999999999996532 47899999999998432 11 1 233
Q ss_pred HHHHHhhhhcCceeeccceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 035766 65 YHLRQIGVYLDLHFVNKPEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRL 124 (128)
Q Consensus 65 ~~L~~~l~~~g~~~~~~~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~ 124 (128)
..++.++.++|+..++ .+.+... ...-. + ++...+.+++.++++.++.+++
T Consensus 131 ~pl~~~~~f~G~~~~~--~~~~~g~--~~~~~-~----~~~~~~~~~~~~~~y~~~l~~~ 181 (192)
T 3f2v_A 131 RPFELTAKYCNADYRP--PFTFHTI--DSNAG-Y----SEAARQEVERSARDYLAWLDAL 181 (192)
T ss_dssp HHHHHHHHHTTCEECC--CEEEEC--------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEee--eEEEecc--ccccc-c----ccCCHHHHHHHHHHHHHHHHHH
Confidence 4578899999999985 3444431 11111 1 2333445555555555555443
No 27
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=99.61 E-value=2.4e-15 Score=108.60 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=87.7
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCC--CCcCCCCeEEEEeecCCCCh-HHHHHHHHHhhhhcCceeeccc
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRP--PNVWADKAAAIVSAAGGSGG-ARAQYHLRQIGVYLDLHFVNKP 82 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~--~~~~~~Kp~~~v~~sg~~gg-~~a~~~L~~~l~~~g~~~~~~~ 82 (128)
.+.+.+||+|||+||+|++++|+.+|++||++... ...+.||++++++++|..|+ ..+...|+..+..+|+.+++.+
T Consensus 63 ~~~l~~aD~ii~gsP~y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~~g~~~~~l~~l~~~l~~~g~~~v~~~ 142 (198)
T 3b6i_A 63 PQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIG 142 (198)
T ss_dssp GGGGGGCSEEEEEEEEETTEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEESSSTTHHHHHHHHHHHHHHTTCEECCCT
T ss_pred HHHHHHCCEEEEEeChhcCCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeCCCCccHHHHHHHHHHHHHHCCcEEECCC
Confidence 56789999999999999999999999999999631 02589999999999855444 5677888888999999998532
Q ss_pred eee---------eccCCC--CCcc-CCCC-CCCCHHHHHHHHHHHHHHHHHHHHhh
Q 035766 83 EYF---------LNAFQP--PAKF-DSDG-NLIDEESKEKLKAVLLALRAFTLRLQ 125 (128)
Q Consensus 83 ~~~---------i~~~~~--~~~f-d~~g-~l~~~~~~~~l~~~~~~l~~~~~~~~ 125 (128)
+. +..... ...+ +.++ ...+++..++++++.+++.+.+++++
T Consensus 143 -~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~la~~~~~~~ 197 (198)
T 3b6i_A 143 -YAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLN 197 (198)
T ss_dssp -TCSGGGGCCSSCCCCBTTBCEEECCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcccccccccccCCCCCCcceecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 21 010000 0111 1122 23378899999999999999988875
No 28
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=99.60 E-value=2.2e-14 Score=103.85 Aligned_cols=118 Identities=16% Similarity=0.093 Sum_probs=85.7
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcC-CCCcCCCCeEEEEeec-CCCChH-HHHHHHHHhhhhcCceeeccc
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASR-PPNVWADKAAAIVSAA-GGSGGA-RAQYHLRQIGVYLDLHFVNKP 82 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~-~~~~~~~Kp~~~v~~s-g~~gg~-~a~~~L~~~l~~~g~~~~~~~ 82 (128)
.+.+.+||+|||+||+|++++|+.+|++||++.. ....+.||++++++++ |..|+. .+...+...+...|+.++..+
T Consensus 47 ~~~l~~aD~ii~gsP~y~g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t~g~~~g~~~~~l~~l~~~l~~~g~~~~~~~ 126 (188)
T 2ark_A 47 KEDVLWADGLAVGSPTNMGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSSSGGWGGGNEVACMSILTMLMNFGFLVFGVT 126 (188)
T ss_dssp HHHHHHCSEEEEEEECBTTBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEEESSBTSSHHHHHHHHHHHHHHTTCEECCEE
T ss_pred HHHHHhCCEEEEEeCccCCcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEECCCCCCCHHHHHHHHHHHHHHCCcEEeCCC
Confidence 4678999999999999999999999999999963 1136899999999997 445443 566777777778899888532
Q ss_pred eeeeccCCCCCccC--CCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 035766 83 EYFLNAFQPPAKFD--SDGNLIDEESKEKLKAVLLALRAFTLRLQ 125 (128)
Q Consensus 83 ~~~i~~~~~~~~fd--~~g~l~~~~~~~~l~~~~~~l~~~~~~~~ 125 (128)
.+..... ...+. ..+.+.+++..++++++.+++.+.+++++
T Consensus 127 ~~~~~~~--~~~~g~~~~~~p~~~~~~~~~~~~g~~la~~~~~~~ 169 (188)
T 2ark_A 127 DYVGKKF--TLHYGAVVAGEPRSEEEKEACRRLGRRLAEWVAIFV 169 (188)
T ss_dssp EEEETTE--EESSSEEEESSCCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccc--cCCCcceeecCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 2211100 00111 12344348899999999999999988775
No 29
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=99.58 E-value=1e-14 Score=111.99 Aligned_cols=82 Identities=13% Similarity=-0.023 Sum_probs=63.5
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-----------CcCCCCeEEEEeecCCC------ChH-----
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-----------NVWADKAAAIVSAAGGS------GGA----- 61 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-----------~~~~~Kp~~~v~~sg~~------gg~----- 61 (128)
.+.++|.+||+|||++|+||+++|+.||++||++.+.+ +.+.||++.+++++|+. ||.
T Consensus 86 ~~~~~l~~AD~IV~~~P~y~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg~~~~y~~~g~~~~~~ 165 (273)
T 1d4a_A 86 AEQKKLEAADLVIFQFPLQWFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMN 165 (273)
T ss_dssp HHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSSCTGGGSTTBTTCCHH
T ss_pred HHHHHHHhCCEEEEECchhhccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCCChHHhcccccCCCHH
Confidence 35677999999999999999999999999999997532 46899999999998442 221
Q ss_pred -HHHHHHHHhhhhcCceeeccceeeec
Q 035766 62 -RAQYHLRQIGVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 62 -~a~~~L~~~l~~~g~~~~~~~~~~i~ 87 (128)
.....++.++.++|+.+++ .+.+.
T Consensus 166 ~~~~~~~~~~l~~~G~~~~~--~~~~~ 190 (273)
T 1d4a_A 166 VILWPIQSGILHFCGFQVLE--PQLTY 190 (273)
T ss_dssp HHHHHHHTTTTGGGTCEECC--CEEET
T ss_pred HHHHHHHHHHHHhCCCeeee--EEEEe
Confidence 1123566788999999984 44443
No 30
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=99.57 E-value=2.3e-14 Score=104.33 Aligned_cols=121 Identities=12% Similarity=0.026 Sum_probs=87.5
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCC--CCcCCCCeEEEEeecCC-CCh-HHHHHHHHHhhhhcCceeec
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRP--PNVWADKAAAIVSAAGG-SGG-ARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~--~~~~~~Kp~~~v~~sg~-~gg-~~a~~~L~~~l~~~g~~~~~ 80 (128)
+.+.+.++|+|||+||+|++++|+.+|++||++.+. ...+.||++++++++|. +|+ ..+...|+..+...|+.+++
T Consensus 48 ~~~~l~~~D~ii~gsP~y~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~f~s~g~~~g~~~~~l~~l~~~l~~~G~~~vg 127 (193)
T 3d7n_A 48 GWAALDAADAIIFGTPTYMGGPSWQFKKFADASSKPWFSAKWQDKVFGGFTNSASLNGDKLNTLQYLVLLAGQHGGLWVS 127 (193)
T ss_dssp HHHHHHHCSEEEEEEEEETTEECHHHHHHHHHTHHHHHTTTTTTCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHCCEEEEEeCccCCCccHHHHHHHHHhhhhccccccCCCEEEEEEECCCCCCChHHHHHHHHHHHHHCCCEEeC
Confidence 568899999999999999999999999999999620 14689999999999844 444 56788999999999999885
Q ss_pred cceeeecc------------C--CCCCccC-CCCC--CCCHHHHHHHHHHHHHHHHHHHHhhc
Q 035766 81 KPEYFLNA------------F--QPPAKFD-SDGN--LIDEESKEKLKAVLLALRAFTLRLQG 126 (128)
Q Consensus 81 ~~~~~i~~------------~--~~~~~fd-~~g~--l~~~~~~~~l~~~~~~l~~~~~~~~~ 126 (128)
.. ...+. . .....+. .++. ..|++..+.++.+.+++.+.+++++.
T Consensus 128 ~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~d~~~l~~a~~~G~~la~~~~~l~~ 189 (193)
T 3d7n_A 128 LG-IKPSNLKSSVRNDANRMGSYIAPMAQSDADAAPEEMSVGDLETARLYGARVANVARQHKS 189 (193)
T ss_dssp CC--------------------CCSCEEEC-------CCCHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred Cc-cCcccccccccccCCCCCCcceeeEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 32 11110 0 0011122 2222 24788999999999999999888764
No 31
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.54 E-value=5.8e-14 Score=111.79 Aligned_cols=106 Identities=11% Similarity=-0.031 Sum_probs=85.3
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcC-CCCeEEEEeecCCCChHHHHHHHHHhhhh-cCceeeccc
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVW-ADKAAAIVSAAGGSGGARAQYHLRQIGVY-LDLHFVNKP 82 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~-~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~-~g~~~~~~~ 82 (128)
+.+.+.+||+|||+||+|++++|+.+|+++||+.+ ..+ .||++++++++|..++ +...|+.+|.. +|+.++..+
T Consensus 301 ~~~~l~~~D~iiigsP~y~~~~~~~~k~fld~l~~--~~~~~~K~~~~~~t~g~~~~--a~~~l~~~l~~~~g~~~~~~~ 376 (414)
T 2q9u_A 301 VALHTYDSGAVAFASPTLNNTMMPSVAAALNYVRG--LTLIKGKPAFAFGAFGWSNR--AVPDIVAELRDGCKADVYDEK 376 (414)
T ss_dssp HHHHHHTCSEEEEECCCBTTBCCHHHHHHHHHHHH--HTTTTTSBEEEEEEESSSCC--HHHHHHHHHHHTSCCBCCCSS
T ss_pred HHHHHHhCCEEEEEcCccCcCchHHHHHHHHHHHh--hcccCCCEEEEEEecCCCch--hHHHHHHHHHhhcCcEEccCc
Confidence 45789999999999999999999999999999974 246 8999999998855554 56789999998 999888533
Q ss_pred eeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 035766 83 EYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRLQG 126 (128)
Q Consensus 83 ~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~~~ 126 (128)
.+.+. +.+ +++..++++++.+++.+++++++.
T Consensus 377 ~~~~~-----------~~p-~~~~~~~~~~~g~~l~~~~~~~~~ 408 (414)
T 2q9u_A 377 GITFK-----------FNY-TEELLEQAYNAGVDLGKRAIAYCE 408 (414)
T ss_dssp CEEEE-----------SCC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEe-----------eCC-CHHHHHHHHHHHHHHHHHHHHHhh
Confidence 23321 122 677889999999999998887764
No 32
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=99.54 E-value=9.1e-14 Score=100.99 Aligned_cols=82 Identities=13% Similarity=0.089 Sum_probs=65.2
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCC------CCcCCCCeEEEEeecCCC------Ch------HHHHH
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRP------PNVWADKAAAIVSAAGGS------GG------ARAQY 65 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~------~~~~~~Kp~~~v~~sg~~------gg------~~a~~ 65 (128)
...+++.+||+|||++|+||+++|+.||++||++.+. .+.+.||++.++.++|+. +| .....
T Consensus 44 ~~~~~l~~aD~iV~~~P~y~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~~~y~~~g~~g~~~~~~l~ 123 (177)
T 3ha2_A 44 QEQSLLLQNDRIILEFPLYWYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMR 123 (177)
T ss_dssp HHHHHHHTCSEEEEEEECBTTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCGGGSSTTSTTCSCHHHHTH
T ss_pred HHHHHHHhCCEEEEECChhhccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCChHHhcccCcccCCHHHHHH
Confidence 4578999999999999999999999999999998643 257899999999998432 11 23445
Q ss_pred HHHHhhhhcCceeeccceeeec
Q 035766 66 HLRQIGVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 66 ~L~~~l~~~g~~~~~~~~~~i~ 87 (128)
.++.++.++|+..++ .+.+.
T Consensus 124 p~~~~~~~~G~~~~~--~~~~~ 143 (177)
T 3ha2_A 124 PFEAFANKTKMMYLP--ILAVH 143 (177)
T ss_dssp HHHHHHHHTTCEECC--CEEEE
T ss_pred HHHHHHHhCCCeEeC--eEEEe
Confidence 668889999999985 34443
No 33
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.48 E-value=1.5e-13 Score=108.64 Aligned_cols=101 Identities=11% Similarity=-0.013 Sum_probs=80.3
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC--CcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeecc
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP--NVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNK 81 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~--~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~ 81 (128)
.+.+.+.+||+|||+||+||+++|+.+||+|||+.+.. . |.||++++++++|..++ +..+|+..+..+|+.++.
T Consensus 300 ~~~~~l~~~d~iiigsP~y~~~~~~~~k~~ld~l~~~~~~~-l~~k~~~~~~~~g~~~~--a~~~l~~~l~~~g~~~~~- 375 (404)
T 2ohh_A 300 EIVKDILESGAIALGAPTIYDEPYPSVGDLLMYLRGLKFNR-TLTRKALVFGSMGGNGG--ATGTMKELLAEAGFDVAC- 375 (404)
T ss_dssp HHHHHHHTCSEEEEECCEETTEECTHHHHHHHHHHHHCGGG-TCCEEEEEEEEESSSCC--HHHHHHHHHHHTTEEEEE-
T ss_pred HHHHHHHHCCEEEEECccccccchHHHHHHHHHhhhccccc-cCCCEEEEEEecCCCCh--hHHHHHHHHHHCCCEEEe-
Confidence 35678999999999999999999999999999997421 2 69999999998855444 467899999999999885
Q ss_pred ceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 035766 82 PEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFT 121 (128)
Q Consensus 82 ~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~ 121 (128)
+ +.+. +. .+++..++++++.+++.+++
T Consensus 376 ~-~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~ 402 (404)
T 2ohh_A 376 E-EEVY-----------YV-PTGDELDACFEAGRKLAAEI 402 (404)
T ss_dssp E-EEEE-----------SS-CCHHHHHHHHHHHHHHHHHH
T ss_pred E-EEEe-----------eC-CCHHHHHHHHHHHHHHHHHH
Confidence 2 3321 11 25788889999999888765
No 34
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=99.47 E-value=4.9e-13 Score=100.32 Aligned_cols=77 Identities=16% Similarity=0.080 Sum_probs=59.9
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-----------CcCCCCeEEEEeecCCC------ChH-----
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-----------NVWADKAAAIVSAAGGS------GGA----- 61 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-----------~~~~~Kp~~~v~~sg~~------gg~----- 61 (128)
...+++.+||+|||++|+||+++|+.||++|||+.+++ +.+.||++.++.++|+. +|.
T Consensus 85 ~~~~~l~~aD~iv~~~P~y~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~~~~~y~~~g~~~~~~ 164 (228)
T 3tem_A 85 DEQKKVREADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSR 164 (228)
T ss_dssp HHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSSCTTTTSTTSTTCCHH
T ss_pred HHHHHHHhCCEEEEECChhhcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCCCHHHHhhccccCCHH
Confidence 35678999999999999999999999999999997542 46899999999988432 111
Q ss_pred HHHHHH-HHhhhhcCceeec
Q 035766 62 RAQYHL-RQIGVYLDLHFVN 80 (128)
Q Consensus 62 ~a~~~L-~~~l~~~g~~~~~ 80 (128)
..+..+ +.++.++|+..++
T Consensus 165 ~~l~p~~~~~~~~~G~~~~~ 184 (228)
T 3tem_A 165 YFLWPLQHGTLHFCGFKVLA 184 (228)
T ss_dssp HHHHHHHCCCCCTTTCEECC
T ss_pred HHHHHHHHHHHHhCCceEcC
Confidence 112223 4578899999885
No 35
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=99.41 E-value=2.8e-12 Score=96.03 Aligned_cols=82 Identities=11% Similarity=0.021 Sum_probs=63.2
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCC----------------------CCcCCCCeEEEEeecCCCC--
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRP----------------------PNVWADKAAAIVSAAGGSG-- 59 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~----------------------~~~~~~Kp~~~v~~sg~~g-- 59 (128)
...+++.+||+|||++|+||+++|+.||++||++... .+.+.||++.++.++|...
T Consensus 76 ~~~~~l~~aD~iv~~~P~y~~~~p~~lK~~iD~v~~~g~af~y~~~g~~~~~p~~~yG~~glL~gKk~~li~T~G~p~~~ 155 (218)
T 3rpe_A 76 SEIENYLWADTIIYQMPAWWMGEPWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREA 155 (218)
T ss_dssp HHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHHHHTBTTTBCCCSCCSTTTTSCTTCCBSCTTCEEEEEEECSSCTHH
T ss_pred HHHHHHHhCCEEEEECChHhccCCHHHHHHHHHHHhcCcceeeccccccccccccccCCccCCCCCEEEEEEcCCCChHh
Confidence 3578999999999999999999999999999998321 1357999999999984421
Q ss_pred ---------hH---HHHHHHHHhhhhcCceeeccceeeec
Q 035766 60 ---------GA---RAQYHLRQIGVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 60 ---------g~---~a~~~L~~~l~~~g~~~~~~~~~~i~ 87 (128)
+. ..+..++.++.++|+..++ .+.+.
T Consensus 156 y~~~g~~~~g~~~~~~l~p~~~~l~f~G~~~l~--~~~~~ 193 (218)
T 3rpe_A 156 FTDPEQFFHGVGVDGVYLPFHKANQFLGMKPLP--TFMCN 193 (218)
T ss_dssp HHCTTSTTTTCHHHHHTHHHHHHHHHTTCEECC--CEEEC
T ss_pred hcccccccccCCHHHHHHHHHHHHHhCCCEEec--eEEEe
Confidence 11 1223468999999999985 34443
No 36
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=99.34 E-value=6.1e-12 Score=85.58 Aligned_cols=74 Identities=7% Similarity=-0.099 Sum_probs=62.5
Q ss_pred HHHHhcCeEEEEcccCCCCCcHH--HHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeecccee
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGP--LKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNKPEY 84 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~--lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~~~~ 84 (128)
+.+.++|.+||+||.|++++|+. +|+++|++.. .+.||+++++++.|... ..+..+|+..+..+|+.+++ .+
T Consensus 42 ~~l~~~d~vi~g~p~y~~~~~~~~~~~~fl~~l~~---~l~~k~~~~~~t~g~~~-~~~~~~l~~~l~~~g~~~~~--~~ 115 (137)
T 2fz5_A 42 DDVASKDVILLGCPAMGSEELEDSVVEPFFTDLAP---KLKGKKVGLFGSYGWGS-GEWMDAWKQRTEDTGATVIG--TA 115 (137)
T ss_dssp HHHHTCSEEEEECCCBTTTBCCHHHHHHHHHHHGG---GCSSCEEEEEEEESSCC-SHHHHHHHHHHHHTTCEEEE--EE
T ss_pred HHHhcCCEEEEEccccCCCCCCHHHHHHHHHHhhh---hcCCCEEEEEEecCCCC-chHHHHHHHHHHHCCCEEcC--cE
Confidence 56889999999999999999999 9999999963 78999999999875432 25788999999999999883 45
Q ss_pred ee
Q 035766 85 FL 86 (128)
Q Consensus 85 ~i 86 (128)
.+
T Consensus 116 ~~ 117 (137)
T 2fz5_A 116 IV 117 (137)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 37
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.31 E-value=1.6e-11 Score=96.80 Aligned_cols=102 Identities=13% Similarity=-0.004 Sum_probs=80.0
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeeccce
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNKPE 83 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~~~ 83 (128)
.+.+.+.++|++||+||+|++++|+.+|+++|++.. ..+.||+++++++.|.+++ +...|+..|..+|+.++..+.
T Consensus 295 ~~~~~~~~~d~ii~g~p~y~~~~~~~~~~~l~~l~~--~~~~~k~~~~~~s~g~~~~--a~~~l~~~l~~~g~~~~~~~~ 370 (398)
T 1ycg_A 295 DVIKEILDARAVLVGSPTINNDILPVVSPLLDDLVG--LRPKNKVGLAFGAYGWGGG--AQKILEERLKAAKIELIAEPG 370 (398)
T ss_dssp HHHHHHHHCSEEEEECCCBTTBCCGGGHHHHHHHHH--HCCSSCEEEEEEEESSSCC--HHHHHHHHHHHTTCEESCSSC
T ss_pred HHHHHHHHCCEEEEECCccCccchHHHHHHHHHHhc--cccCCCEEEEEEeCCCchH--HHHHHHHHHHHCCeEEecCce
Confidence 456778999999999999999999999999999974 3689999999998754433 467899999999998885321
Q ss_pred eeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 035766 84 YFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFT 121 (128)
Q Consensus 84 ~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~ 121 (128)
+.+.. . .+++..++++++.+++.+.+
T Consensus 371 ~~~~~-----------~-p~~~~~~~~~~~~~~l~~~~ 396 (398)
T 1ycg_A 371 PTVQW-----------V-PRGEDLQRCYELGRKIAARI 396 (398)
T ss_dssp CEEES-----------S-CCHHHHHHHHHHHHHHHHHH
T ss_pred EEEec-----------C-CCHHHHHHHHHHHHHHHHHH
Confidence 33321 1 14677888888888887664
No 38
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.18 E-value=4.1e-10 Score=88.81 Aligned_cols=103 Identities=8% Similarity=-0.023 Sum_probs=81.1
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeeccce
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNKPE 83 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~~~ 83 (128)
.+.+.+.++|++||+||.|++++|+.+|+++|++.. ..+.||+++++++.|.++ .+...|+..+..+|+.++.. .
T Consensus 296 ~~~~~~~~~d~ii~gsp~~~~~~~~~~~~~l~~l~~--~~l~~k~~~~f~t~g~~~--~a~~~l~~~l~~~G~~~~~~-~ 370 (402)
T 1e5d_A 296 QIMSEISDAGAVIVGSPTHNNGILPYVAGTLQYIKG--LRPQNKIGGAFGSFGWSG--ESTKVLAEWLTGMGFDMPAT-P 370 (402)
T ss_dssp HHHHHHHTCSEEEEECCCBTTBCCHHHHHHHHHHHH--TCCCSCEEEEEEEESSSC--HHHHHHHHHHHHTTCBCCSC-C
T ss_pred HHHHHHHHCCEEEEECCccCCCchHHHHHHHHHhhh--cccCCCEEEEEEcCCCcc--HHHHHHHHHHHHCCCEEecC-c
Confidence 356778999999999999999999999999999975 368999999999875443 45778999999999998842 3
Q ss_pred eeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 035766 84 YFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLR 123 (128)
Q Consensus 84 ~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~ 123 (128)
+.+.. .. +++..++++++.+++.+.++.
T Consensus 371 ~~~~~-----------~p-~~~~~~~~~~~~~~l~~~l~~ 398 (402)
T 1e5d_A 371 VKVKN-----------VP-THADYEQLKTMAQTIARALKA 398 (402)
T ss_dssp EEEES-----------SC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEee-----------CC-CHHHHHHHHHHHHHHHHHHhh
Confidence 43321 11 467778888888888877654
No 39
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=99.12 E-value=3e-10 Score=80.42 Aligned_cols=104 Identities=13% Similarity=-0.035 Sum_probs=77.9
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeeccce
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNKPE 83 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~~~ 83 (128)
.+.+.+.++|+|||+||.|++.+|. ++++|.+.. ..+.||++++.++.|..| .+...|+..|...|+.++.. .
T Consensus 44 ~~~~~~~~~d~ii~Gspty~g~~p~--~~fl~~l~~--~~l~gk~v~~fgs~g~~g--~a~~~l~~~l~~~G~~~v~~-~ 116 (161)
T 3hly_A 44 ELIEAVSSARGIVLGTPPSQPSEAV--ATALSTIFA--AAHNKQAIGLFDSYGGDD--EPIDALLAQFRNLGLHTAFP-P 116 (161)
T ss_dssp HHHHHHHHCSEEEEECCBSSCCHHH--HHHHHHHHH--HCCTTSEEEEECCCCSSB--CCHHHHHHHHHHTTCEESSS-C
T ss_pred HHHHHHHhCCEEEEEcCCcCCchhH--HHHHHHHHh--hhhCCCEEEEEEcCCCCc--HHHHHHHHHHHHCCCEEecC-c
Confidence 3456778999999999999977664 999999864 358999999999875543 45778899999999988732 2
Q ss_pred eeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 035766 84 YFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLRLQG 126 (128)
Q Consensus 84 ~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~~~~ 126 (128)
+.+ .|.+ +++..++++++.+++.+..+.-++
T Consensus 117 ~~~-----------~~~P-~~~dl~~~~~~g~~la~~l~~~~~ 147 (161)
T 3hly_A 117 IRV-----------KDQP-TEAIYQQCEESGTDLGQWLTRADA 147 (161)
T ss_dssp BCC-----------CSSC-CHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred eEE-----------eeCC-CHHHHHHHHHHHHHHHHHHHhhhH
Confidence 211 2222 578888999999999887765443
No 40
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=99.11 E-value=3.9e-10 Score=87.22 Aligned_cols=76 Identities=17% Similarity=0.117 Sum_probs=57.5
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-------------------CcCCCCeEEEEeecCCCC------
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-------------------NVWADKAAAIVSAAGGSG------ 59 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-------------------~~~~~Kp~~~v~~sg~~g------ 59 (128)
..+++.+||.|||++|.||+++|+.||++||++-.++ +.+.||++.++.++|+..
T Consensus 106 ~~~~l~~aD~iv~~~P~~w~~~Pa~lK~~iDrv~~~g~ay~~~~~~~~~~~~~~~~g~l~gKk~~l~~T~g~~~~~y~~~ 185 (280)
T 4gi5_A 106 EQEKLLWADTVIFQFPLWWFSMPAIMKGWIDRVYAWGFAYGVGEHSDRHWGDRYGEGTFVGKRAMLIVTAGGWAEHYSPR 185 (280)
T ss_dssp HHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBSCSCBSSSCBSSCSSCSTTTTCEEEEEEECSSCGGGGSTT
T ss_pred HHHHHHhCCEEEEEeccccccCcHHHHHHHHHhcccCceeccCCccccccccccCccccCCCEEEEEEecCCChHHcccc
Confidence 4578999999999999999999999999999996532 357899999998884321
Q ss_pred hH--HHHHHH----HHhhhhcCceeec
Q 035766 60 GA--RAQYHL----RQIGVYLDLHFVN 80 (128)
Q Consensus 60 g~--~a~~~L----~~~l~~~g~~~~~ 80 (128)
|. ...+.| +.++.++|+.++|
T Consensus 186 g~~~~~~~~l~~~~~~~~~~~Gm~~l~ 212 (280)
T 4gi5_A 186 GINGPIDDILFPIQHGMLFYPGFEVLP 212 (280)
T ss_dssp BTTCCHHHHTHHHHCCCCCTTTCEECC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCeECC
Confidence 11 111222 3467799999996
No 41
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=99.10 E-value=5.5e-10 Score=78.83 Aligned_cols=72 Identities=13% Similarity=-0.020 Sum_probs=61.1
Q ss_pred HHHHhcCeEEEEcccCC-CCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCC--CC--hHHHHHHHHHhhhhcCceeec
Q 035766 7 NTFLEFICFHLLTDLFS-SFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGG--SG--GARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn-~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~--~g--g~~a~~~L~~~l~~~g~~~~~ 80 (128)
+.+.++|.+||++|.|+ +.+|+.+|+++|++.. ..+.||++++++++|. +| ...+...|+..+..+|+.++.
T Consensus 42 ~~l~~~d~ii~g~pty~~g~~p~~~~~f~~~l~~--~~l~gk~~~~f~t~~~~~~~~~~~~a~~~l~~~l~~~g~~~~~ 118 (169)
T 1czn_A 42 SDLNAYDYLIIGCPTWNVGELQSDWEGIYDDLDS--VNFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLGSQTVG 118 (169)
T ss_dssp GGGGGCSEEEEECCEETTTEECHHHHHHGGGGGG--SCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECC
T ss_pred hHHhhCCEEEEEecccCCCcCCHHHHHHHHHhhh--hccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEE
Confidence 35788999999999999 5699999999999975 4799999999999843 33 357888999999999998884
No 42
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=99.07 E-value=1e-09 Score=74.98 Aligned_cols=94 Identities=12% Similarity=0.021 Sum_probs=71.1
Q ss_pred HHHHhcCeEEEEcccCCCCCcH--HHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeecccee
Q 035766 7 NTFLEFICFHLLTDLFSSFVQG--PLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNKPEY 84 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~--~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~~~~ 84 (128)
+.+.++|.+||++|.|+++++| .+|+++|++.. .+.+|+++++++.|..+ ..+...|+..|..+|+.++.. .+
T Consensus 41 ~~l~~~d~iiig~pty~~g~~p~~~~~~fl~~l~~---~l~~k~~~~f~t~g~~~-~~a~~~l~~~l~~~G~~~v~~-~~ 115 (138)
T 5nul_A 41 DELLNEDILILGCSAMTDEVLEESEFEPFIEEIST---KISGKKVALFGSYGWGD-GKWMRDFEERMNGYGCVVVET-PL 115 (138)
T ss_dssp HHHTTCSEEEEEECCBTTTBCCTTTHHHHHHHHGG---GCTTCEEEEEEEESSSC-SHHHHHHHHHHHHTTCEECSC-CE
T ss_pred HHHhhCCEEEEEcCccCCCCCChHHHHHHHHHHHh---hcCCCEEEEEEecCCCC-ChHHHHHHHHHHHCCCEEECC-ce
Confidence 4688999999999999999754 79999999974 39999999999885443 366788999999999998842 33
Q ss_pred eeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHH
Q 035766 85 FLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALR 118 (128)
Q Consensus 85 ~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~ 118 (128)
.+. |.+ +++. ++++++.+++.
T Consensus 116 ~~~-----------~~p-~~~d-~~~~~~~~~l~ 136 (138)
T 5nul_A 116 IVQ-----------NEP-DEAE-QDCIEFGKKIA 136 (138)
T ss_dssp EEE-----------SSC-GGGH-HHHHHHHHHHH
T ss_pred EEe-----------cCC-CHHH-HHHHHHHHHHh
Confidence 332 223 2344 77777776664
No 43
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=99.03 E-value=7.1e-10 Score=76.68 Aligned_cols=71 Identities=8% Similarity=-0.019 Sum_probs=59.5
Q ss_pred HHH-hcCeEEEEcccCC---CCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecC-CC-ChHHHHHHHHHhhhhcCceeec
Q 035766 8 TFL-EFICFHLLTDLFS---SFVQGPLKNAIDWASRPPNVWADKAAAIVSAAG-GS-GGARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 8 ~i~-~AD~ii~~tPeYn---~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg-~~-gg~~a~~~L~~~l~~~g~~~~~ 80 (128)
.+. ++|.+||+||.|+ |.+|+.+|+++|++.. ..+.+|+++++++++ .+ ....+...|+..|..+|+.++.
T Consensus 45 ~l~~~~d~ii~g~pty~~~~G~~p~~~~~fl~~l~~--~~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~ 121 (148)
T 3f6r_A 45 NLADGYDAVLFGCSAWGMEDLEMQDDFLSLFEEFDR--IGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIA 121 (148)
T ss_dssp TTTTTCSEEEEEECEECSSSCEECHHHHHHHTTGGG--TCCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECS
T ss_pred HhcccCCEEEEEecccCCCCCCCcHHHHHHHHHhhc--cCCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEee
Confidence 355 8999999999999 5999999999999975 468999999999862 23 2346678899999999999884
No 44
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=99.02 E-value=1.9e-09 Score=76.08 Aligned_cols=71 Identities=8% Similarity=-0.089 Sum_probs=60.0
Q ss_pred HHHhcCeEEEEcccCC-CCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCC--CC--hHHHHHHHHHhhhhcCceeec
Q 035766 8 TFLEFICFHLLTDLFS-SFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGG--SG--GARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn-~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~--~g--g~~a~~~L~~~l~~~g~~~~~ 80 (128)
.+.++|.|||++|.|+ +.+|+.+|+++|++.. ..+.||++++++++|. ++ ...+...|+..+..+|+.++.
T Consensus 43 ~l~~~d~ii~g~p~y~~g~~p~~~~~fl~~l~~--~~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~ 118 (169)
T 1obo_A 43 DLNDYQYLIIGCPTLNIGELQSDWEGLYSELDD--VDFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVG 118 (169)
T ss_dssp GGGGCSEEEEEEEEETTTEECHHHHHHHTTGGG--CCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECC
T ss_pred HHhhCCEEEEEEeeCCCCcCCHHHHHHHHHhhh--cCcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEE
Confidence 5778999999999997 5677889999999975 4789999999999843 33 357788999999999999884
No 45
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=99.02 E-value=1.4e-09 Score=77.05 Aligned_cols=101 Identities=13% Similarity=0.001 Sum_probs=76.4
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeeccce
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNKPE 83 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~~~ 83 (128)
.+.+.+.++|+|||+||.|++.+| .+.++|.+.. ..+.+|++++.++.|..++ +...|+..|..+|+.++.. .
T Consensus 49 ~~~~~~~~~d~ii~Gspty~g~~p--~~~~l~~l~~--~~~~~k~va~fgs~g~~~~--a~~~l~~~l~~~G~~~v~~-~ 121 (159)
T 3fni_A 49 ELRELVGRCTGLVIGMSPAASAAS--IQGALSTILG--SVNEKQAVGIFETGGGDDE--PIDPLLSKFRNLGLTTAFP-A 121 (159)
T ss_dssp HHHHHHHTEEEEEEECCBTTSHHH--HHHHHHHHHH--HCCTTSEEEEECCSSSCBC--CHHHHHHHHHHTTCEESSS-C
T ss_pred HHHHHHHhCCEEEEEcCcCCCCcc--HHHHHHHHHh--hcccCCEEEEEEcCCCCcH--HHHHHHHHHHHCCCEEecC-c
Confidence 355678889999999999998866 4999998864 3579999999997754443 4677888899999988842 2
Q ss_pred eeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 035766 84 YFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLR 123 (128)
Q Consensus 84 ~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~ 123 (128)
+.+ .|.+ +++..++++++.+++.+.++.
T Consensus 122 ~~~-----------~~~P-~~~dl~~~~~~g~~la~~~~~ 149 (159)
T 3fni_A 122 IRI-----------KQTP-TENTYKLCEEAGTDLGQWVTR 149 (159)
T ss_dssp BCC-----------SSCC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred eEE-----------EeCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 211 2333 578888999999988877654
No 46
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=98.99 E-value=5.5e-10 Score=77.03 Aligned_cols=71 Identities=13% Similarity=0.005 Sum_probs=59.2
Q ss_pred HHHh-cCeEEEEcccCCC-C--CcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCC-hHHHHHHHHHhhhhcCceeec
Q 035766 8 TFLE-FICFHLLTDLFSS-F--VQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSG-GARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 8 ~i~~-AD~ii~~tPeYn~-~--i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~g-g~~a~~~L~~~l~~~g~~~~~ 80 (128)
.+.+ +|.+||+||.|+. . +|+.+|+++|++.. ..+.+|++++++++ +.++ ...+..+|+..|..+|+.++.
T Consensus 44 ~l~~~~d~ii~~~p~y~~g~~~~p~~~~~fl~~l~~--~~l~~k~~~v~~~g~~~~~~~~~a~~~l~~~l~~~g~~~~~ 120 (147)
T 1f4p_A 44 GLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEE--TGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQ 120 (147)
T ss_dssp TTTTTCSEEEEEECEECSSSCEECTTTHHHHHTGGG--SCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECS
T ss_pred HhcCcCCEEEEEeCCCCCCCcCCChhHHHHHHHHHh--cccCCCEEEEEeecCCChHHHHHHHHHHHHHHHHcCCeEhh
Confidence 3567 9999999999965 5 69999999999975 47899999999997 3333 457788999999999998874
No 47
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=98.86 E-value=1.8e-08 Score=71.29 Aligned_cols=65 Identities=12% Similarity=0.130 Sum_probs=56.7
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
.+.++|.|||++|.|++.+|+.+++++|.+ .+.||++++++++|..+...+...|+..+. ++.++
T Consensus 75 ~l~~yd~iilG~P~~~g~~~~~~~~fl~~~-----~l~gk~v~~f~t~g~~~~g~~~~~l~~~l~--~~~~~ 139 (162)
T 3klb_A 75 HPEKYEVLFVGFPVWWYIAPTIINTFLESY-----DFAGKIVVPFATSGGSGIGNCEKNLHKAYP--DIVWK 139 (162)
T ss_dssp CGGGCSEEEEEEECBTTBCCHHHHHHHHTS-----CCTTCEEEEEEECSSCCSHHHHHHHHHHCT--TSEEC
T ss_pred ChhhCCEEEEEcccccCCCCHHHHHHHHhc-----CCCCCEEEEEEEeCCCCccHHHHHHHHHcC--CCEee
Confidence 477899999999999999999999999986 588999999999876665678889999987 67665
No 48
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=98.84 E-value=5.6e-08 Score=69.28 Aligned_cols=72 Identities=11% Similarity=-0.024 Sum_probs=60.7
Q ss_pred HHHHhcCeEEEEcccC-CCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCCh----HHHHHHHHHhhhhcCceeec
Q 035766 7 NTFLEFICFHLLTDLF-SSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGG----ARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeY-n~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg----~~a~~~L~~~l~~~g~~~~~ 80 (128)
..+.++|.+||++|.| .+.+|+.++++++++.. ..+.||++++.++++..|. ..+...|+..|...|+.++.
T Consensus 41 ~~l~~~d~ii~g~pt~~~G~~p~~~~~f~~~l~~--~~l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~ 117 (175)
T 1ag9_A 41 EDLEAYDILLLGIPTWYYGEAQCDWDDFFPTLEE--IDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVG 117 (175)
T ss_dssp HHHHTCSEEEEECCEETTTEECHHHHHHHHHHTT--CCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEECC
T ss_pred hHhhhCCEEEEEEeecCCCcChHHHHHHHhhhhh--cccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEE
Confidence 5688999999999996 57888889999999975 4799999999999854321 47788999999999998884
No 49
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=98.81 E-value=1.9e-08 Score=72.00 Aligned_cols=72 Identities=11% Similarity=0.087 Sum_probs=61.2
Q ss_pred HHHHhcCeEEEEcccCC-CCCc--------HHHHHHHHhhcCCCCcCCCCeEEEEeecCC--CC--hHHHHHHHHHhhhh
Q 035766 7 NTFLEFICFHLLTDLFS-SFVQ--------GPLKNAIDWASRPPNVWADKAAAIVSAAGG--SG--GARAQYHLRQIGVY 73 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn-~~i~--------~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~--~g--g~~a~~~L~~~l~~ 73 (128)
+.+.++|.|||++|.|+ +.+| +.+|.++|++.. ..+.||++++.++++. ++ ...+...|+..+..
T Consensus 43 ~~l~~~d~ii~g~pty~~G~~pg~~~~~~~~~~~~f~~~l~~--~~l~gk~~avfg~g~~~~~~~~f~~a~~~l~~~l~~ 120 (182)
T 2wc1_A 43 ADFMAYDFLILGTPTLGDGQLPGLSANAASESWEEFLPRIAD--QDFSGKTIALFGLGDQVTYPLEFVNALFFLHEFFSD 120 (182)
T ss_dssp HHHHHCSEEEEEEECBTTTBCSSGGGTCSSCCHHHHGGGGTT--CCCTTCEEEEEEECCTTTCTTSTTTHHHHHHHHHHT
T ss_pred HHHhhCCeEEEEEeeCCCCCCCccccccchhHHHHHHHHhhh--ccCCCCEEEEEEeCCCcccchhHHHHHHHHHHHHHH
Confidence 46889999999999999 8888 899999999975 4789999999999843 32 25677889999999
Q ss_pred cCceeec
Q 035766 74 LDLHFVN 80 (128)
Q Consensus 74 ~g~~~~~ 80 (128)
+|+.++.
T Consensus 121 ~G~~~v~ 127 (182)
T 2wc1_A 121 RGANVVG 127 (182)
T ss_dssp TTCEEEC
T ss_pred CCCEEEE
Confidence 9999884
No 50
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=98.75 E-value=4.4e-08 Score=70.07 Aligned_cols=66 Identities=12% Similarity=0.131 Sum_probs=57.0
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
..+.++|.|||++|.|++++|+.++.+||.+ .+.||++++++++|+.+...+...|+.++. ++.+.
T Consensus 83 ~~l~~yD~iilg~Pvy~g~~~~~~~~fl~~~-----~l~gk~v~~f~t~g~~~~g~a~~~l~~~l~--~~~~~ 148 (171)
T 4ici_A 83 ENIGTYDVVFIGYPIWWDLAPRIINTFIEGH-----SLKGKTVVPFATSGGSSIGNSATVLKKTYP--DLNWK 148 (171)
T ss_dssp TTGGGCSEEEEEEECBTTBCCHHHHHHHHHS-----CCTTSEEEEEEECSSCCSHHHHHHHHHHST--TSEEC
T ss_pred ccHhHCCEEEEecccccCCchHHHHHHHHHc-----CCCcCEEEEEEecCCCCcchHHHHHHHHcC--CCeec
Confidence 3578999999999999999999999999998 578999999999865665678889999987 66665
No 51
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=98.65 E-value=3.8e-07 Score=65.09 Aligned_cols=72 Identities=11% Similarity=-0.008 Sum_probs=60.8
Q ss_pred HHHHhcCeEEEEcccCC-CCCc--------HHHHHHHHhhcCCCCcCCCCeEEEEeecCC--CC--hHHHHHHHHHhhhh
Q 035766 7 NTFLEFICFHLLTDLFS-SFVQ--------GPLKNAIDWASRPPNVWADKAAAIVSAAGG--SG--GARAQYHLRQIGVY 73 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn-~~i~--------~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~--~g--g~~a~~~L~~~l~~ 73 (128)
+.+.++|.|||++|.|+ +.+| ..++.+++++.. ..+.||++++.++++. ++ ...+...|+..+..
T Consensus 42 ~~l~~~d~iilg~pt~~~G~~pg~~~~~~~~~~~~fl~~l~~--~~l~gk~~a~fg~g~~~~y~~~~~~a~~~l~~~l~~ 119 (179)
T 1yob_A 42 EDFAQYQFLILGTPTLGEGELPGLSSDAENESWEEFLPKIEG--LDFSGKTVALFGLGDQVGYPENYLDALGELYSFFKD 119 (179)
T ss_dssp HHHHTCSEEEEEEECBTTTBCSSGGGTCSSCCHHHHHHHHTT--CCCTTCEEEEEEECCTTTCTTTTTHHHHHHHHHHHT
T ss_pred HHHhcCCEEEEEeccCCCCcCCcccccccchHHHHHHHHhhh--cccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHH
Confidence 56889999999999999 8899 889999999964 4789999999999833 32 34677889999998
Q ss_pred cCceeec
Q 035766 74 LDLHFVN 80 (128)
Q Consensus 74 ~g~~~~~ 80 (128)
.|+.++.
T Consensus 120 ~G~~~~~ 126 (179)
T 1yob_A 120 RGAKIVG 126 (179)
T ss_dssp TTCEEEC
T ss_pred CCCEEEE
Confidence 9998873
No 52
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=98.55 E-value=1.1e-07 Score=66.30 Aligned_cols=65 Identities=14% Similarity=0.272 Sum_probs=52.6
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
.+.++|+|||++|.|++.+|+.+|+++|.+. .+.+|++++.+++|. +...+...++..+. ++.++
T Consensus 73 ~l~~~d~iilG~P~~~g~~~~~~~~fl~~~~----~~~~k~~~~~t~gg~-~~g~~~~~l~~~~~--~~~~~ 137 (151)
T 3edo_A 73 DYNNYDLILIGSPVWSGYPATPIKTLLDQMK----NYRGEVASFFTSAGT-NHKAYVSHFNEWAD--GLNVI 137 (151)
T ss_dssp CGGGCSEEEEEEEEETTEECTHHHHHHHHTT----TCCSEEEEEEECSSC-CHHHHHHHHHHHTT--TSEEE
T ss_pred CHhhCCEEEEEcceecccccHHHHHHHHhch----hcCCEEEEEEEeCCC-CCCcHHHHHHHHcC--CCeee
Confidence 4678999999999999999999999999983 577888888887743 33456678888886 66666
No 53
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=98.53 E-value=2.4e-07 Score=74.72 Aligned_cols=74 Identities=4% Similarity=-0.032 Sum_probs=62.3
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeec
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~ 80 (128)
+.+.+.+.+||++|++||-||+++++.++.+++.+.. ..+.+|++++.++-|.+|+ |...++..|+.+|+.++.
T Consensus 311 s~i~~~i~~~~~ivlGspT~~~~~~p~~~~~l~~l~~--~~~~~K~~~~FGSyGWsg~--a~~~~~~~l~~~~~~~v~ 384 (410)
T 4dik_A 311 SEILKDIPDSEALIFGVSTYEAEIHPLMRFTLLEIID--KANYEKPVLVFGVHGWAPS--AERTAGELLKETKFRILS 384 (410)
T ss_dssp HHHHHHSTTCSEEEEEECCTTSSSCHHHHHHHHHHHH--HCCCCCEEEEEEECCCCCT--TSCCHHHHHTTSSCEEEE
T ss_pred HHHHHHHHhCCeEEEEeCCcCCcCCHHHHHHHHHHHh--cccCCCEEEEEECCCCCcH--HHHHHHHHHHHCCCEEEC
Confidence 4567788899999999999999999999999999864 4678999999987665554 456788889999999884
No 54
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=98.37 E-value=7.8e-07 Score=63.06 Aligned_cols=72 Identities=11% Similarity=0.007 Sum_probs=59.3
Q ss_pred HHHHhcCeEEEEcccCC-CCC----cHHHHHHH-HhhcCCCCcCCCCeEEEEeecCCCC----hHHHHHHHHHhhhhcCc
Q 035766 7 NTFLEFICFHLLTDLFS-SFV----QGPLKNAI-DWASRPPNVWADKAAAIVSAAGGSG----GARAQYHLRQIGVYLDL 76 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn-~~i----~~~lKn~i-D~l~~~~~~~~~Kp~~~v~~sg~~g----g~~a~~~L~~~l~~~g~ 76 (128)
..+.++|.+||++|.|+ +.+ |+.++.++ +++.. ..+.||++++.++++..| ...+...|+..|...|+
T Consensus 41 ~~l~~~d~ii~g~pt~~~G~~~~~~p~~~~~fl~~~l~~--~~l~gk~~avfg~g~~~~y~~~f~~a~~~l~~~l~~~G~ 118 (173)
T 2fcr_A 41 QALKDYDLLFLGAPTWNTGADTERSGTSWDEFLYDKLPE--VDMKDLPVAIFGLGDAEGYPDNFCDAIEEIHDCFAKQGA 118 (173)
T ss_dssp GGGGGCSEEEEEEECCSTTCSSCCSCSTHHHHHHHTGGG--CCCTTCEEEEEEEECTTTCTTSTTTHHHHHHHHHHHTTC
T ss_pred hHHccCCEEEEEEeecCCCCcCccCcHHHHHHHHhhccc--cccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCC
Confidence 34678999999999999 899 89999999 99964 478999999999984332 22567788888988999
Q ss_pred eeec
Q 035766 77 HFVN 80 (128)
Q Consensus 77 ~~~~ 80 (128)
.++.
T Consensus 119 ~~~~ 122 (173)
T 2fcr_A 119 KPVG 122 (173)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8873
No 55
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=98.15 E-value=5.8e-06 Score=58.33 Aligned_cols=73 Identities=7% Similarity=-0.149 Sum_probs=58.0
Q ss_pred HHHhcCeEEEEcccC-CCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeecCC-CC-hHHHHHHHHHhhhhcCceeec
Q 035766 8 TFLEFICFHLLTDLF-SSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAAGG-SG-GARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 8 ~i~~AD~ii~~tPeY-n~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~sg~-~g-g~~a~~~L~~~l~~~g~~~~~ 80 (128)
.+.++|.|||++|.| ++.+|+.++.+++++.... ..+.+|++++.+.++. ++ ...+...|...|..+|+.++.
T Consensus 53 ~l~~~d~ii~g~pt~g~G~~p~~~~~f~~~l~~~~~~~l~~k~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~v~ 129 (167)
T 1ykg_A 53 QIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLL 129 (167)
T ss_dssp GGGGCSEEEEEEECBGGGBCCGGGHHHHHHHTSTTCCCCTTCEEEEEEECCTTSSSTTHHHHHHHHHHHHHTCEESS
T ss_pred HhccCCeEEEEEcccCCCcCChhHHHHHHHHHhccccccCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHCCCeEee
Confidence 466899999999999 7889999999999996411 3588999999998632 32 335677888899999998773
No 56
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=97.92 E-value=3.5e-05 Score=53.78 Aligned_cols=69 Identities=14% Similarity=0.115 Sum_probs=51.6
Q ss_pred HHHHhcCeEEEEcccCC-CCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCC--CC--hHHHHHHHHHhhhhcCceee
Q 035766 7 NTFLEFICFHLLTDLFS-SFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGG--SG--GARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn-~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~--~g--g~~a~~~L~~~l~~~g~~~~ 79 (128)
..+.++|.+||++|.|+ +.+|..++.+++++.. ..+.+|++++.++++. ++ ...+...|+..|.. +.++
T Consensus 40 ~~l~~~d~ii~g~pt~~~g~~p~~~~~f~~~l~~--~~l~~k~~avf~~G~~~~y~~~~~~a~~~l~~~l~~--~~~~ 113 (164)
T 2bmv_A 40 EQFNSFTKVILVAPTAGAGDLQTDWEDFLGTLEA--SDFANKTIGLVGLGDQDTYSETFAEGIFHIYEKAKA--GKVV 113 (164)
T ss_dssp HHHTTCSEEEEEEEEETTTEECHHHHHHHTTCCT--HHHHTSEEEEEEECCTTTCTTSTTTHHHHHHHHHTT--SEEC
T ss_pred hHHhhCCEEEEEECCcCCCcCcHHHHHHHHHHhh--hhcCCCEEEEEEeCCcchhhHHHhHHHHHHHHHHhh--CEEE
Confidence 45788999999999997 5577779999999864 3688999999998632 33 23556677777765 4444
No 57
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=97.89 E-value=1.7e-05 Score=57.69 Aligned_cols=72 Identities=6% Similarity=0.038 Sum_probs=58.0
Q ss_pred HHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCC--hHHHHHHHHHhhhhcCceeec
Q 035766 9 FLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSG--GARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 9 i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~g--g~~a~~~L~~~l~~~g~~~~~ 80 (128)
+.++|.+||++|-|+|.+|+.++.+++|+.... ..+.+|++++.+.+ -.++ ...+...|...|..+|+.++.
T Consensus 65 l~~~d~vi~g~~Ty~G~~p~~~~~fl~~L~~~~~~~l~~~~~avfG~Gds~y~~~f~~a~~~l~~~L~~~Ga~~v~ 140 (191)
T 1bvy_F 65 LPREGAVLIVTASYNGHPPDNAKQFVDWLDQASADEVKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIA 140 (191)
T ss_dssp CCSSSEEEEEECCBTTBCCTTTHHHHHHHHTCCSSCCTTCCEEEEEEECTTSGGGTTHHHHHHHHHHHTTTCCCCE
T ss_pred hhhCCeEEEEEeecCCCcCHHHHHHHHHHHhccchhhCCCEEEEEEccCCchhhhHhHHHHHHHHHHHHCCCeEee
Confidence 556899999999999999999999999996421 35899999999987 3343 235667888889999998773
No 58
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=97.70 E-value=2.3e-06 Score=58.90 Aligned_cols=72 Identities=4% Similarity=-0.140 Sum_probs=54.2
Q ss_pred HHhcCeEEEEcccC-CCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCC-CC-hHHHHHHHHHhhhhcCceeec
Q 035766 9 FLEFICFHLLTDLF-SSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGG-SG-GARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 9 i~~AD~ii~~tPeY-n~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~-~g-g~~a~~~L~~~l~~~g~~~~~ 80 (128)
+.++|.+||++|.| ++.+|+.++.+++++....+.+.+|++++.+.++. ++ ...+...|...|..+|+.++.
T Consensus 44 l~~~d~vi~g~pt~g~g~~p~~~~~f~~~l~~~~~~l~~~~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~ 118 (147)
T 2hna_A 44 LPASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTG 118 (147)
T ss_dssp SCSEEEEEEECCTTTTCCTTSSCHHHHHHHHHHCCCTTEEEEEEESCCHHHHSCSSSCTTHHHHHHHHHTCEECS
T ss_pred cccCCeEEEEECccCCCCCChhHHHHHHHHHhhccccCCCEEEEEecccCCHHHHHHHHHHHHHHHHHcCCeEee
Confidence 45689999999999 89999999999999953112688999999987521 11 113345677888888998773
No 59
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=97.28 E-value=0.0012 Score=49.15 Aligned_cols=72 Identities=10% Similarity=-0.128 Sum_probs=56.7
Q ss_pred HHHhcCeEEEEcccC-CCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCC-hHHHHHHHHHhhhhcCceee
Q 035766 8 TFLEFICFHLLTDLF-SSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSG-GARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 8 ~i~~AD~ii~~tPeY-n~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~g-g~~a~~~L~~~l~~~g~~~~ 79 (128)
.+.+.|.+||+||-| +|.+|...+.+++||......+.++.++++|.+ ..+. ...+...+...|..+|+..+
T Consensus 83 ~l~~~~~vI~~tsTyG~Ge~Pdna~~F~~~L~~~~~~l~~~~~aVfGlGdssY~~F~~a~k~ld~~L~~lGa~~l 157 (219)
T 3hr4_A 83 CLEEERLLLVVTSTFGNGDCPGNGEKLKKSLFMLKELNNKFRYAVFGLGSSMYPRFCAFAHDIDQKLSHLGASQL 157 (219)
T ss_dssp GGGTCSEEEEEEECBTTTBCCGGGHHHHHHHHHCCCCSSCCEEEEEEEECTTSSSTTHHHHHHHHHHHHHTCEES
T ss_pred HhccCCeEEEEEeccCCCcCCHHHHHHHHHHHhcchhhcCCEEEEEeCCCcchHHHhHHHHHHHHHHHHCCCCEe
Confidence 456789999999999 788888899999999742236899999999987 3332 23456677788889999877
No 60
>2xod_A NRDI protein, NRDI; flavoprotein, redox protein, ribonucleotide reductase; HET: FMN; 0.96A {Bacillus anthracis} PDB: 2xoe_A* 2x2o_A* 2x2p_A*
Probab=96.71 E-value=0.0027 Score=41.96 Aligned_cols=54 Identities=11% Similarity=0.008 Sum_probs=39.3
Q ss_pred hcCeEEEEcccCC-CCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecC-CCCh--HHHHHHHHHhh
Q 035766 11 EFICFHLLTDLFS-SFVQGPLKNAIDWASRPPNVWADKAAAIVSAAG-GSGG--ARAQYHLRQIG 71 (128)
Q Consensus 11 ~AD~ii~~tPeYn-~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg-~~gg--~~a~~~L~~~l 71 (128)
.+|.+++++|.|+ +.+|..++.+++. +.+|.++++++++ .++. ..+...|...+
T Consensus 32 ~~~~ii~g~pt~~~g~~p~~~~~fl~~-------~~~~~~~v~g~G~~~y~~~~~~~~~~l~~~~ 89 (119)
T 2xod_A 32 IDEDFILITYTTGFGNVPERVLEFLER-------NNEKLKGVSASGNRNWGDMFGASADKISAKY 89 (119)
T ss_dssp CCSCEEEEECCBTTTBCCHHHHHHHHH-------HGGGEEEEEEEECGGGGGGTTHHHHHHHHHH
T ss_pred cCCCEEEEEeecCCCcCCHHHHHHHHH-------cCCCEEEEEEeCCChHHHHHHHHHHHHHHHh
Confidence 4899999999996 8999888888765 5679999998863 2332 34445555443
No 61
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=96.40 E-value=0.005 Score=52.41 Aligned_cols=72 Identities=4% Similarity=-0.059 Sum_probs=57.9
Q ss_pred HHhc-CeEEEEcccC-CCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCC-hHHHHHHHHHhhhhcCceeec
Q 035766 9 FLEF-ICFHLLTDLF-SSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSG-GARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 9 i~~A-D~ii~~tPeY-n~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~g-g~~a~~~L~~~l~~~g~~~~~ 80 (128)
+.+. |.+||++|-| +|.+|...+.+++|+.... ..+.+|++++.+.+ ..++ ...+...+...|..+|+..+-
T Consensus 95 l~~~~~~vi~~~sT~G~G~~p~~~~~F~~~l~~~~~~~L~~~~~avfGlGds~Y~~f~~a~k~l~~~L~~lGa~~l~ 171 (682)
T 2bpo_A 95 LNDVPVIVSIFISTYGEGDFPDGAVNFEDFICNAEAGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLG 171 (682)
T ss_dssp GGGCCSEEEEEEECBTTTBCCSSCHHHHHHHHTCCTTSSTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECS
T ss_pred HhhcCCeEEEEeCccCCCCCCHHHHHHHHHHHhccchhccCCEEEEEecCCCCchhHhHHHHHHHHHHHHCCCeEeE
Confidence 4567 9999999999 9999999999999997521 45999999999977 2332 335567788889999998873
No 62
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=96.08 E-value=0.022 Score=47.88 Aligned_cols=69 Identities=6% Similarity=-0.068 Sum_probs=54.9
Q ss_pred hcCeEEEEcccC-CCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCC-hHHHHHHHHHhhhhcCceee
Q 035766 11 EFICFHLLTDLF-SSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSG-GARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 11 ~AD~ii~~tPeY-n~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~g-g~~a~~~L~~~l~~~g~~~~ 79 (128)
+.|.+||+||-| +|.+|...+.+++|+......+.||.+++.|.+ ..++ ...+...+...|..+|+..+
T Consensus 70 ~~~~vi~~~sT~G~G~~pd~~~~F~~~L~~~~~~l~~~~~avfGlGd~~Y~~f~~~~k~~d~~L~~lGa~~~ 141 (618)
T 3qe2_A 70 DNALVVFCMATYGEGDPTDNAQDFYDWLQETDVDLSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRI 141 (618)
T ss_dssp TTCEEEEEEECBGGGBCCGGGHHHHHHHHHCCCCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEES
T ss_pred cCcEEEEEcCccCCCCCCHHHHHHHHHHhhccccccCCEEEEEeCCCCCcHhHhHHHHHHHHHHHhCCCCEe
Confidence 468999999999 999999999999999742247999999999987 4332 23445667777888999877
No 63
>1rlj_A NRDI protein; flavoprotein, FMN, thioredoxin, alpha/beta/alpha sandwich, structural genomics, PSI, protein structure initiative; HET: FMN; 2.00A {Bacillus subtilis} SCOP: c.23.5.7
Probab=94.92 E-value=0.1 Score=35.72 Aligned_cols=86 Identities=13% Similarity=0.062 Sum_probs=50.3
Q ss_pred HhcCeEEEEcccC-CCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCC-CChHHHHHHHHHhhhhcCceeeccceeeec
Q 035766 10 LEFICFHLLTDLF-SSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGG-SGGARAQYHLRQIGVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 10 ~~AD~ii~~tPeY-n~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~-~gg~~a~~~L~~~l~~~g~~~~~~~~~~i~ 87 (128)
...|-+|++||.| .|.+|..++.+|+.- .++.+++++.+.. +|... ...-+.+...++..+.
T Consensus 42 ~~~~~~ilv~pTyG~G~~P~~v~~Fl~~~-------~~~~~~V~g~Gd~~yg~~f-~~a~~~i~~~~~~~~~-------- 105 (139)
T 1rlj_A 42 HVDTPFVLVTYTTNFGQVPASTQSFLEKY-------AHLLLGVAASGNKVWGDNF-AKSADTISRQYQVPIL-------- 105 (139)
T ss_dssp CCCSCEEEEECCBGGGBCCHHHHHHHHHH-------GGGEEEEEEEECGGGGGGT-THHHHHHHHHHTCCEE--------
T ss_pred ccCCCEEEEEcCcCCCcCcHHHHHHHHhC-------CCCEEEEEecCCCcHHHHH-HHHHHHHHHHcCCCCc--------
Confidence 3568899999999 799999888776432 3478888887743 34321 1122223344443222
Q ss_pred cCCCCCccCCCCCCCCHHHHHHHHHHHHHHHH
Q 035766 88 AFQPPAKFDSDGNLIDEESKEKLKAVLLALRA 119 (128)
Q Consensus 88 ~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~ 119 (128)
..|+-.| +++..+++++.++++.+
T Consensus 106 -----~~~el~g---~~~D~~~~~~~~~~~~~ 129 (139)
T 1rlj_A 106 -----HKFELSG---TSKDVELFTQEVERVVT 129 (139)
T ss_dssp -----EEEETTC---CHHHHHHHHHHHHHHHH
T ss_pred -----ceEEEcC---CHHHHHHHHHHHHHHHH
Confidence 1222122 35666677777777654
No 64
>3n3a_C Protein NRDI; ribonucleotide reductase, four-helix bundle, dimanganese CLU flavoprotein, oxidoreductase; HET: FMN; 1.99A {Escherichia coli} PDB: 3n39_C* 3n3b_C*
Probab=94.68 E-value=0.071 Score=37.47 Aligned_cols=86 Identities=12% Similarity=0.091 Sum_probs=54.2
Q ss_pred HhcCeEEEEcccCC-----CCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCC-CChH--HHHHHHHHhhhhcCceeecc
Q 035766 10 LEFICFHLLTDLFS-----SFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGG-SGGA--RAQYHLRQIGVYLDLHFVNK 81 (128)
Q Consensus 10 ~~AD~ii~~tPeYn-----~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~-~gg~--~a~~~L~~~l~~~g~~~~~~ 81 (128)
...+-+|++||-|. |.+|..+..+|+.+. -.++.+++++++.. +|.. .|.+.+. ..++.
T Consensus 57 ~~~ep~vlv~PTYg~g~~~G~vP~~v~dFl~~~~-----n~~~~~gVigsGN~nfg~~Fc~A~d~ia---~k~~v----- 123 (153)
T 3n3a_C 57 QVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEH-----NRALLRGVIASGNRNFGEAYGRAGDVIA---RKCGV----- 123 (153)
T ss_dssp CCCSCEEEEEECCTTSSSSSSSCHHHHHHHTSHH-----HHHHEEEEEEEECGGGGGGTTHHHHHHH---HHHTC-----
T ss_pred ccCCCEEEEEeccCCCCcCCcCcHHHHHHHhhhc-----ccCcEEEEEecCCCchhHHHHHHHHHHH---HHhCC-----
Confidence 35678999999997 899999988887552 34678899998843 4432 3333443 33332
Q ss_pred ceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHH
Q 035766 82 PEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRA 119 (128)
Q Consensus 82 ~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~ 119 (128)
|.+ -+|+-.| +++..+++++.+++|.+
T Consensus 124 P~l--------~kfEL~G---t~eDv~~v~~~~~~~~~ 150 (153)
T 3n3a_C 124 PWL--------YRFELMG---TQSDIENVRKGVTEFWQ 150 (153)
T ss_dssp CEE--------EEEETTC---CHHHHHHHHHHHHHHHH
T ss_pred CeE--------EEEeCCC---CHHHHHHHHHHHHHHHh
Confidence 222 1233233 35677888888877653
No 65
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=93.53 E-value=0.12 Score=44.10 Aligned_cols=71 Identities=6% Similarity=-0.194 Sum_probs=55.5
Q ss_pred HHhcCeEEEEcccC-CCCCcHHHHHHHHhhcCC------------------------------------------CCcCC
Q 035766 9 FLEFICFHLLTDLF-SSFVQGPLKNAIDWASRP------------------------------------------PNVWA 45 (128)
Q Consensus 9 i~~AD~ii~~tPeY-n~~i~~~lKn~iD~l~~~------------------------------------------~~~~~ 45 (128)
+...+.+||+||-| ||..|.-.+.+++|+... .+.+.
T Consensus 55 l~~~~~vl~vtsT~G~Gdpp~n~~~F~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~L~ 134 (688)
T 1tll_A 55 LEHEALVLVVTSTFGNGDPPENGEKFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDGPDLRDNFESTGPLA 134 (688)
T ss_dssp GGGCSEEEEEECCBTTTBCCGGGHHHHHHHHHHTC-----CCCCCHHHHTSCCC----------------------CTTT
T ss_pred hccCceEEEEEcccCCCcCCHHHHHHHHHHHhccCCccccccccccccccccccccccccccccccccccccccccccCC
Confidence 45689999999999 999999999999997521 02588
Q ss_pred CCeEEEEeec-CCCC-hHHHHHHHHHhhhhcCceee
Q 035766 46 DKAAAIVSAA-GGSG-GARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 46 ~Kp~~~v~~s-g~~g-g~~a~~~L~~~l~~~g~~~~ 79 (128)
|+.+++.|-+ -.+. ...+...+...|..+|+..+
T Consensus 135 ~~~~aVfGlGds~Y~~F~~~~k~ld~~L~~lGa~rl 170 (688)
T 1tll_A 135 NVRFSVFGLGSRAYPHFCAFGHAVDTLLEELGGERI 170 (688)
T ss_dssp TCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEES
T ss_pred CCeEEEEeeccCchHHHHHHHHHHHHHHHHcCCcee
Confidence 9999999977 3332 23455678888999999877
No 66
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=73.85 E-value=11 Score=27.67 Aligned_cols=93 Identities=10% Similarity=0.010 Sum_probs=46.3
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHH---HhhcCCCCcC-CCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeecc
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAI---DWASRPPNVW-ADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNK 81 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~i---D~l~~~~~~~-~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~ 81 (128)
.+.++++|.+|+++|. +..++..+ +-+.. .+ .++. ++..|. ........+...+...|...+..
T Consensus 52 ~~~~~~advvi~~v~~-----~~~~~~v~~~~~~l~~---~l~~g~~--vv~~st--~~~~~~~~~~~~~~~~g~~~~~~ 119 (287)
T 3pdu_A 52 AEVCAACDITIAMLAD-----PAAAREVCFGANGVLE---GIGGGRG--YIDMST--VDDETSTAIGAAVTARGGRFLEA 119 (287)
T ss_dssp HHHHHHCSEEEECCSS-----HHHHHHHHHSTTCGGG---TCCTTCE--EEECSC--CCHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHcCCEEEEEcCC-----HHHHHHHHcCchhhhh---cccCCCE--EEECCC--CCHHHHHHHHHHHHHcCCEEEEC
Confidence 4567889999999995 34677776 44431 23 3443 344441 11222233444444456665543
Q ss_pred ceeeeccCCCCCccCCCCCCC-----CHHHHHHHHHHHHH
Q 035766 82 PEYFLNAFQPPAKFDSDGNLI-----DEESKEKLKAVLLA 116 (128)
Q Consensus 82 ~~~~i~~~~~~~~fd~~g~l~-----~~~~~~~l~~~~~~ 116 (128)
|.. +. .....+|.+. +++..++++.+++.
T Consensus 120 pv~--g~----~~~a~~g~l~~~~gg~~~~~~~~~~ll~~ 153 (287)
T 3pdu_A 120 PVS--GT----KKPAEDGTLIILAAGDQSLFTDAGPAFAA 153 (287)
T ss_dssp CEE--CC----HHHHHHTCEEEEEEECHHHHHHTHHHHHH
T ss_pred Ccc--CC----HHHHhcCCEEEEEeCCHHHHHHHHHHHHH
Confidence 321 11 1121233322 56666666666554
No 67
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=72.06 E-value=3.7 Score=27.79 Aligned_cols=51 Identities=14% Similarity=0.208 Sum_probs=34.5
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC------------CcHHHHHHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF------------VQGPLKNAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~------------i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+. ++.+.+|.|-+. ....+..++||+.. ....+++.++|.| |
T Consensus 58 ~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~---~~~~~~i~l~G~S~G 121 (220)
T 2fuk_A 58 VTMAARALREL-GITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRA---QRPTDTLWLAGFSFG 121 (220)
T ss_dssp HHHHHHHHHTT-TCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHH---HCTTSEEEEEEETHH
T ss_pred HHHHHHHHHHC-CCeEEEEecCCCCCCCCCcccCchhHHHHHHHHHHHHh---cCCCCcEEEEEECHH
Confidence 44555666554 677777777532 23567888888864 4566799999999 5
No 68
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=72.04 E-value=6.9 Score=27.67 Aligned_cols=51 Identities=8% Similarity=-0.144 Sum_probs=34.2
Q ss_pred hhHHHHHH---HhcCeEEEEcccCCCC----CcH---HHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTF---LEFICFHLLTDLFSSF----VQG---PLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i---~~AD~ii~~tPeYn~~----i~~---~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|..+.+.+ ..+.++.+.+|.|.++ ++. .+..+++|+.. .+..+++.++|.|
T Consensus 62 ~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~---~~~~~~i~l~G~S 122 (273)
T 1vkh_A 62 FNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVK---EKGLTNINMVGHS 122 (273)
T ss_dssp GHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHH---HHTCCCEEEEEET
T ss_pred HHHHHHHHhhhhccCCcEEEEeecccCCCCCCCcHHHHHHHHHHHHHH---hCCcCcEEEEEeC
Confidence 55555666 3578899999999754 333 34455666642 4566889999988
No 69
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=69.54 E-value=3 Score=28.55 Aligned_cols=52 Identities=12% Similarity=0.037 Sum_probs=35.3
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC--CC-----------------------cHHHHHHHHhhcCCCCcCCCCeEEEEeec-
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS--FV-----------------------QGPLKNAIDWASRPPNVWADKAAAIVSAA- 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~--~i-----------------------~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s- 55 (128)
|..+.+.+.+ .++.+++|.|-+ +- ...+..+++|+.. .....+++.++|.|
T Consensus 48 ~~~~~~~l~~-~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~--~~~d~~~i~l~G~S~ 124 (241)
T 3f67_A 48 IRDLCRRLAQ-EGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAAR--HGGDAHRLLITGFCW 124 (241)
T ss_dssp HHHHHHHHHH-TTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHT--TTEEEEEEEEEEETH
T ss_pred HHHHHHHHHH-CCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHh--ccCCCCeEEEEEEcc
Confidence 4455666664 588888998843 22 2346788888865 23456789999998
Q ss_pred C
Q 035766 56 G 56 (128)
Q Consensus 56 g 56 (128)
|
T Consensus 125 G 125 (241)
T 3f67_A 125 G 125 (241)
T ss_dssp H
T ss_pred c
Confidence 5
No 70
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=67.68 E-value=4.4 Score=30.60 Aligned_cols=53 Identities=6% Similarity=0.013 Sum_probs=35.3
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC--------CcHHHH---HHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF--------VQGPLK---NAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~--------i~~~lK---n~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|..+.+.+.+ .+++++++.|-+. .+..++ .+++|+......|.+.++.++|.|
T Consensus 130 ~~~~~~~la~-~g~~vv~~d~r~~gg~~~~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S 193 (361)
T 1jkm_A 130 HRRWCTDLAA-AGSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGES 193 (361)
T ss_dssp HHHHHHHHHH-TTCEEEEEECCCSEETTEECCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEET
T ss_pred hhHHHHHHHh-CCCEEEEEecCCCCCCCCCCCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEEC
Confidence 4445667777 7888889998876 455554 447887531123454589999988
No 71
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=63.67 E-value=27 Score=26.00 Aligned_cols=96 Identities=14% Similarity=0.050 Sum_probs=47.2
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHH---HhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeecc
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAI---DWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNK 81 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~i---D~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~ 81 (128)
..+.++++|.||+++|.- ..++..+ +-+.. ..-.++.+ +..|+. .......+...+...|...+..
T Consensus 71 ~~~~~~~aDvvi~~vp~~-----~~~~~v~~~~~~l~~--~l~~g~~v--v~~st~--~~~~~~~~~~~~~~~g~~~v~~ 139 (310)
T 3doj_A 71 PAEVIKKCKYTIAMLSDP-----CAALSVVFDKGGVLE--QICEGKGY--IDMSTV--DAETSLKINEAITGKGGRFVEG 139 (310)
T ss_dssp HHHHHHHCSEEEECCSSH-----HHHHHHHHSTTCGGG--GCCTTCEE--EECSCC--CHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHhCCEEEEEcCCH-----HHHHHHHhCchhhhh--ccCCCCEE--EECCCC--CHHHHHHHHHHHHHcCCEEEeC
Confidence 345678899999999853 3566666 43321 12234443 333311 1222233444444557766654
Q ss_pred ceeeeccCCCCCccCCCCCCC-----CHHHHHHHHHHHHHH
Q 035766 82 PEYFLNAFQPPAKFDSDGNLI-----DEESKEKLKAVLLAL 117 (128)
Q Consensus 82 ~~~~i~~~~~~~~fd~~g~l~-----~~~~~~~l~~~~~~l 117 (128)
|.. +. .....+|.+. +++..++++.+++.+
T Consensus 140 pv~--g~----~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~ 174 (310)
T 3doj_A 140 PVS--GS----KKPAEDGQLIILAAGDKALFEESIPAFDVL 174 (310)
T ss_dssp CEE--CC----HHHHHHTCEEEEEEECHHHHHHHHHHHHHH
T ss_pred CCC--CC----hhHHhcCCeEEEEcCCHHHHHHHHHHHHHh
Confidence 422 21 1111233321 566666666666543
No 72
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=63.47 E-value=37 Score=25.50 Aligned_cols=28 Identities=7% Similarity=-0.199 Sum_probs=19.5
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhh
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWA 37 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l 37 (128)
.+.+||.||+++|... +...++...+++
T Consensus 91 ~~~~aDvVilavp~~~--~~~vl~~l~~~l 118 (314)
T 3ggo_A 91 EDFSPDFVMLSSPVRT--FREIAKKLSYIL 118 (314)
T ss_dssp GGGCCSEEEECSCGGG--HHHHHHHHHHHS
T ss_pred hhccCCEEEEeCCHHH--HHHHHHHHhhcc
Confidence 4678999999999863 455555554444
No 73
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=62.67 E-value=28 Score=25.46 Aligned_cols=25 Identities=0% Similarity=-0.215 Sum_probs=19.3
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHH
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAID 35 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD 35 (128)
.+.++++|.||+++|. |..++..+.
T Consensus 54 ~~~~~~aDvvi~~vp~-----~~~~~~v~~ 78 (302)
T 2h78_A 54 RDAVQGADVVISMLPA-----SQHVEGLYL 78 (302)
T ss_dssp HHHHTTCSEEEECCSC-----HHHHHHHHH
T ss_pred HHHHhCCCeEEEECCC-----HHHHHHHHc
Confidence 4567789999999986 346777776
No 74
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=61.67 E-value=10 Score=25.14 Aligned_cols=51 Identities=10% Similarity=0.139 Sum_probs=31.5
Q ss_pred hhH-HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCC-CCeEEEEeec
Q 035766 2 WLL-TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWA-DKAAAIVSAA 55 (128)
Q Consensus 2 ~~~-~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~-~Kp~~~v~~s 55 (128)
|.. +.+.+.+..++-+.+|.|-+.-...+...++.+.. .+. ++++.++|.|
T Consensus 23 ~~~~~~~~l~~~~g~~vi~~d~~g~~~~~~~~~~~~~~~---~l~~~~~~~lvG~S 75 (194)
T 2qs9_A 23 WYGWVKKELEKIPGFQCLAKNMPDPITARESIWLPFMET---ELHCDEKTIIIGHS 75 (194)
T ss_dssp THHHHHHHHTTSTTCCEEECCCSSTTTCCHHHHHHHHHH---TSCCCTTEEEEEET
T ss_pred HHHHHHHHHhhccCceEEEeeCCCCCcccHHHHHHHHHH---HhCcCCCEEEEEcC
Confidence 544 55666654367778888877434444455555432 333 3788999988
No 75
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=60.45 E-value=16 Score=23.98 Aligned_cols=61 Identities=13% Similarity=0.045 Sum_probs=35.2
Q ss_pred hhHHHHH-HHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHH
Q 035766 2 WLLTYNT-FLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYH 66 (128)
Q Consensus 2 ~~~~~~~-i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~ 66 (128)
|...... +. +.++-+.+|.|-.+-.+.+..+++.+...-..+ .+++.++|.| .||.-+...
T Consensus 21 ~~~~~~~~l~-~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S--~Gg~~a~~~ 82 (192)
T 1uxo_A 21 WFPWLKKRLL-ADGVQADILNMPNPLQPRLEDWLDTLSLYQHTL-HENTYLVAHS--LGCPAILRF 82 (192)
T ss_dssp THHHHHHHHH-HTTCEEEEECCSCTTSCCHHHHHHHHHTTGGGC-CTTEEEEEET--THHHHHHHH
T ss_pred HHHHHHHHHH-hCCcEEEEecCCCCCCCCHHHHHHHHHHHHHhc-cCCEEEEEeC--ccHHHHHHH
Confidence 5555543 43 346666667666444445666666665322334 6889999988 345544443
No 76
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=60.36 E-value=12 Score=28.86 Aligned_cols=27 Identities=7% Similarity=0.094 Sum_probs=21.0
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhc
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWAS 38 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~ 38 (128)
.+.+.+||.+|+++|.+ .++.+++.+.
T Consensus 94 ~ea~~~aDvVilaVp~~------~~~~vl~~i~ 120 (356)
T 3k96_A 94 KASLEGVTDILIVVPSF------AFHEVITRMK 120 (356)
T ss_dssp HHHHTTCCEEEECCCHH------HHHHHHHHHG
T ss_pred HHHHhcCCEEEECCCHH------HHHHHHHHHH
Confidence 45678999999999985 5666766664
No 77
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=56.88 E-value=8.7 Score=27.03 Aligned_cols=54 Identities=9% Similarity=0.075 Sum_probs=36.7
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC-CCcHHHHHHHHhhcCC--------CCcCCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS-FVQGPLKNAIDWASRP--------PNVWADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~-~i~~~lKn~iD~l~~~--------~~~~~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+. ++.+.+|.|-+ ..+..+..++||+... ...+..+++.++|.| |
T Consensus 65 ~~~~~~~l~~~-G~~v~~~d~~~s~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~G 128 (258)
T 2fx5_A 65 YAGLLSHWASH-GFVVAAAETSNAGTGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQG 128 (258)
T ss_dssp GHHHHHHHHHH-TCEEEEECCSCCTTSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHH
T ss_pred HHHHHHHHHhC-CeEEEEecCCCCccHHHHHHHHHHHHhcccccccccccccCccceEEEEEChH
Confidence 55666666554 67778888844 5677788899998531 023344689999998 5
No 78
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=54.65 E-value=11 Score=25.61 Aligned_cols=49 Identities=12% Similarity=-0.063 Sum_probs=35.9
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+..||++|++-..-+. ....++++.+|+........+.|+.+++.=
T Consensus 90 ~~~~~~~~~~i~v~d~~~~-~~~~~~~~~~~l~~~~~~~~~~piilv~nK 138 (196)
T 3llu_A 90 EMIFRGTGALIYVIDAQDD-YMEALTRLHITVSKAYKVNPDMNFEVFIHK 138 (196)
T ss_dssp HHHHHTCSEEEEEEETTSC-CHHHHHHHHHHHHHHHHHCTTCEEEEEEEC
T ss_pred ccccccCCEEEEEEECCCc-hHHHHHHHHHHHHHHHhcCCCCcEEEEEec
Confidence 4557789999999888775 567888888888631113458899888854
No 79
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=54.02 E-value=32 Score=25.39 Aligned_cols=54 Identities=6% Similarity=0.030 Sum_probs=34.4
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----CcHH---HHHHHHhhcCCC---CcCCCC-eEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----VQGP---LKNAIDWASRPP---NVWADK-AAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----i~~~---lKn~iD~l~~~~---~~~~~K-p~~~v~~s 55 (128)
|..+.+.+.+..+++++++.|-+. +|.. +..+++|+.... ....-+ ++.++|.|
T Consensus 134 ~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S 198 (351)
T 2zsh_A 134 YDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDS 198 (351)
T ss_dssp HHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEET
T ss_pred HHHHHHHHHHHcCCEEEEecCCCCCCCCCchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeC
Confidence 556677777556777777877653 3433 456777875410 123445 89999988
No 80
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=50.99 E-value=9.3 Score=27.87 Aligned_cols=54 Identities=13% Similarity=0.105 Sum_probs=36.5
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCCc------HHHHHHHHhhcCC--C---CcCCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFVQ------GPLKNAIDWASRP--P---NVWADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i~------~~lKn~iD~l~~~--~---~~~~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+ .|+.+++|.|.+.-- ..+..++||+... . ..+..+++.++|.| |
T Consensus 112 ~~~~~~~la~-~G~~vv~~d~~g~g~s~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~G 177 (306)
T 3vis_A 112 IAWLGERIAS-HGFVVIAIDTNTTLDQPDSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMG 177 (306)
T ss_dssp HHHHHHHHHT-TTEEEEEECCSSTTCCHHHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHH
T ss_pred HHHHHHHHHh-CCCEEEEecCCCCCCCcchHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChh
Confidence 5556666655 588899999876421 2467888988642 0 23456789999998 5
No 81
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=49.46 E-value=41 Score=24.45 Aligned_cols=24 Identities=0% Similarity=-0.204 Sum_probs=17.5
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHH
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAI 34 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~i 34 (128)
.+.+.++|.+|+++|.- ..++..+
T Consensus 52 ~~~~~~aDvvi~~vp~~-----~~~~~v~ 75 (287)
T 3pef_A 52 CEVVESCPVTFAMLADP-----AAAEEVC 75 (287)
T ss_dssp HHHHHHCSEEEECCSSH-----HHHHHHH
T ss_pred HHHHhcCCEEEEEcCCH-----HHHHHHH
Confidence 45678899999999852 3566665
No 82
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=49.17 E-value=62 Score=23.72 Aligned_cols=92 Identities=14% Similarity=0.079 Sum_probs=44.9
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeeccceeeec
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNKPEYFLN 87 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~~~~~i~ 87 (128)
.+. +|.||+++|.. ..++..++-+.. ..-.++.+ +..|.. .......+...+...|...+..| ++ +
T Consensus 68 ~~~-aDvvi~~vp~~-----~~~~~v~~~l~~--~l~~g~iv--v~~st~--~~~~~~~~~~~~~~~g~~~~~~p-v~-g 133 (296)
T 3qha_A 68 VAA-ADLIHITVLDD-----AQVREVVGELAG--HAKPGTVI--AIHSTI--SDTTAVELARDLKARDIHIVDAP-VS-G 133 (296)
T ss_dssp HTT-SSEEEECCSSH-----HHHHHHHHHHHT--TCCTTCEE--EECSCC--CHHHHHHHHHHHGGGTCEEEECC-EE-S
T ss_pred HHh-CCEEEEECCCh-----HHHHHHHHHHHH--hcCCCCEE--EEeCCC--CHHHHHHHHHHHHHcCCEEEeCC-Cc-C
Confidence 344 99999999853 456666665542 12234433 333311 12222334444555566666443 21 1
Q ss_pred cCCCCCccCCCCCCC-----CHHHHHHHHHHHHHH
Q 035766 88 AFQPPAKFDSDGNLI-----DEESKEKLKAVLLAL 117 (128)
Q Consensus 88 ~~~~~~~fd~~g~l~-----~~~~~~~l~~~~~~l 117 (128)
. ....++|.+. +++..++++.+++.+
T Consensus 134 ~----~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~ 164 (296)
T 3qha_A 134 G----AAAAARGELATMVGADREVYERIKPAFKHW 164 (296)
T ss_dssp C----HHHHHHTCEEEEEECCHHHHHHHHHHHHHH
T ss_pred C----HHHHhcCCccEEecCCHHHHHHHHHHHHHH
Confidence 1 1111223211 566677777766644
No 83
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=48.64 E-value=13 Score=26.06 Aligned_cols=54 Identities=11% Similarity=0.127 Sum_probs=34.6
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC------CCcHH---HHHHHHhhcCCCCc--CCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS------FVQGP---LKNAIDWASRPPNV--WADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~------~i~~~---lKn~iD~l~~~~~~--~~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+ .++.+++|.|-+ ..|.. +..+++|+...... ...+++.++|.| |
T Consensus 54 ~~~~~~~l~~-~G~~v~~~d~~g~g~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~G 119 (277)
T 3bxp_A 54 EAPIATRMMA-AGMHTVVLNYQLIVGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAG 119 (277)
T ss_dssp HHHHHHHHHH-TTCEEEEEECCCSTTTCCCTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHH
T ss_pred chHHHHHHHH-CCCEEEEEecccCCCCCccCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHH
Confidence 5566677766 578888888887 55555 45566777421011 334689999988 5
No 84
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=48.24 E-value=12 Score=26.36 Aligned_cols=52 Identities=15% Similarity=0.115 Sum_probs=31.8
Q ss_pred HHHHHHhc---CeEEEEcccCCCCCcH-----------HHHHHHHhhcCCCCc-CCCCeEEEEeec-C
Q 035766 5 TYNTFLEF---ICFHLLTDLFSSFVQG-----------PLKNAIDWASRPPNV-WADKAAAIVSAA-G 56 (128)
Q Consensus 5 ~~~~i~~A---D~ii~~tPeYn~~i~~-----------~lKn~iD~l~~~~~~-~~~Kp~~~v~~s-g 56 (128)
+.+++.+. .++++++|.|.+..++ .++.+++|+...... ...+.+.++|.| |
T Consensus 88 ~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~G 155 (268)
T 1jjf_A 88 IADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMG 155 (268)
T ss_dssp HHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHH
T ss_pred HHHHHHHcCCCCCEEEEEeCCCCCCccccccHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHH
Confidence 45566554 4788999999865432 255666676421011 134678999988 5
No 85
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=47.99 E-value=16 Score=25.55 Aligned_cols=53 Identities=13% Similarity=0.009 Sum_probs=35.2
Q ss_pred ChhHHHHHHHhcCeEEEEcccCCCC-----------Cc---HHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 1 MWLLTYNTFLEFICFHLLTDLFSSF-----------VQ---GPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 1 ~~~~~~~~i~~AD~ii~~tPeYn~~-----------i~---~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.|..+.+.+.+. ++.+.+|.|-+. ++ ..+..++||+... .....+++.++|.|
T Consensus 43 ~~~~~~~~l~~~-g~~v~~~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~~v~l~G~S 109 (290)
T 3ksr_A 43 HSLVRAREAVGL-GCICMTFDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASL-PYVDAHSIAVVGLS 109 (290)
T ss_dssp TTHHHHHHHHTT-TCEEECCCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTS-TTEEEEEEEEEEET
T ss_pred cHHHHHHHHHHC-CCEEEEeecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhc-CCCCccceEEEEEc
Confidence 366666777654 677778887642 11 3577888888642 23356789999988
No 86
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=47.79 E-value=29 Score=23.61 Aligned_cols=48 Identities=23% Similarity=0.324 Sum_probs=31.5
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC--CcCCCCeEEEEeec
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP--NVWADKAAAIVSAA 55 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~--~~~~~Kp~~~v~~s 55 (128)
....+..+|++|++...-+ +..+.+...|+..-. ....++|+.+++.=
T Consensus 101 ~~~~~~~~d~iilV~D~~~---~~s~~~~~~~l~~i~~~~~~~~~piilV~NK 150 (217)
T 2f7s_A 101 TTAFFRDAMGFLLMFDLTS---QQSFLNVRNWMSQLQANAYCENPDIVLIGNK 150 (217)
T ss_dssp HHHHHTTCCEEEEEEETTC---HHHHHHHHHHHHTCCCCCTTTCCEEEEEEEC
T ss_pred HHHHhcCCCEEEEEEECcC---HHHHHHHHHHHHHHHHhcCcCCCCEEEEEEC
Confidence 3456788999999876544 556666666664311 12268898888763
No 87
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=47.50 E-value=30 Score=25.86 Aligned_cols=25 Identities=0% Similarity=-0.153 Sum_probs=18.1
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHH
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAID 35 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD 35 (128)
.+.++++|.||+++|. |..++..+.
T Consensus 82 ~e~~~~aDvVi~~vp~-----~~~~~~v~~ 106 (320)
T 4dll_A 82 RAAARDADIVVSMLEN-----GAVVQDVLF 106 (320)
T ss_dssp HHHHTTCSEEEECCSS-----HHHHHHHHT
T ss_pred HHHHhcCCEEEEECCC-----HHHHHHHHc
Confidence 4567889999999985 245666653
No 88
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=46.55 E-value=53 Score=24.12 Aligned_cols=92 Identities=15% Similarity=0.135 Sum_probs=44.6
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHH---HhhcCCCCcC-CCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeeccce
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAI---DWASRPPNVW-ADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNKPE 83 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~i---D~l~~~~~~~-~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~~~ 83 (128)
.++++|.||+++|.. ..++..+ +-+. ..+ .++.+ +..|. ........+...+...|...+..|.
T Consensus 61 ~~~~aDvvi~~vp~~-----~~~~~v~~~~~~l~---~~l~~g~iv--v~~st--~~~~~~~~~~~~~~~~g~~~~~~pv 128 (303)
T 3g0o_A 61 FAGVVDALVILVVNA-----AQVRQVLFGEDGVA---HLMKPGSAV--MVSST--ISSADAQEIAAALTALNLNMLDAPV 128 (303)
T ss_dssp TTTTCSEEEECCSSH-----HHHHHHHC--CCCG---GGSCTTCEE--EECSC--CCHHHHHHHHHHHHTTTCEEEECCE
T ss_pred HHhcCCEEEEECCCH-----HHHHHHHhChhhHH---hhCCCCCEE--EecCC--CCHHHHHHHHHHHHHcCCeEEeCCC
Confidence 457899999999963 3566665 3332 223 24433 33331 1122223344444445666664432
Q ss_pred eeeccCCCCCccCCCCCC-----CCHHHHHHHHHHHHHH
Q 035766 84 YFLNAFQPPAKFDSDGNL-----IDEESKEKLKAVLLAL 117 (128)
Q Consensus 84 ~~i~~~~~~~~fd~~g~l-----~~~~~~~~l~~~~~~l 117 (128)
. +. .....+|.+ .+++..++++.+++.+
T Consensus 129 ~--g~----~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~ 161 (303)
T 3g0o_A 129 S--GG----AVKAAQGEMTVMASGSEAAFTRLKPVLDAV 161 (303)
T ss_dssp E--SC----HHHHHTTCEEEEEECCHHHHHHHHHHHHHH
T ss_pred C--CC----hhhhhcCCeEEEeCCCHHHHHHHHHHHHHH
Confidence 1 11 111122221 1566667776666543
No 89
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=46.29 E-value=50 Score=22.16 Aligned_cols=56 Identities=9% Similarity=0.089 Sum_probs=34.6
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCc----H---HHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHH
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQ----G---PLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYH 66 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~----~---~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~ 66 (128)
.+.+.+.+. +.+.+|.|-+.-. . .+..+++|+.. .+..+++.++|.| .||..+...
T Consensus 51 ~~~~~l~~~--~~v~~~d~~~~~~~~~~~~~~d~~~~~~~l~~---~~~~~~i~l~G~S--~Gg~~a~~~ 113 (275)
T 3h04_A 51 QYIDILTEH--YDLIQLSYRLLPEVSLDCIIEDVYASFDAIQS---QYSNCPIFTFGRS--SGAYLSLLI 113 (275)
T ss_dssp HHHHHHTTT--EEEEEECCCCTTTSCHHHHHHHHHHHHHHHHH---TTTTSCEEEEEET--HHHHHHHHH
T ss_pred HHHHHHHhC--ceEEeeccccCCccccchhHHHHHHHHHHHHh---hCCCCCEEEEEec--HHHHHHHHH
Confidence 455555554 8888888875432 2 34556666653 4677899999998 234444433
No 90
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=45.99 E-value=38 Score=25.44 Aligned_cols=23 Identities=4% Similarity=-0.148 Sum_probs=17.4
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF 25 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~ 25 (128)
|..+.+.+++. |+++++|+|-+.
T Consensus 114 ~~~~a~~La~~-Gy~V~~~d~~g~ 136 (383)
T 3d59_A 114 YSAIGIDLASH-GFIVAAVEHRDR 136 (383)
T ss_dssp THHHHHHHHHT-TCEEEEECCCSS
T ss_pred HHHHHHHHHhC-ceEEEEeccCCC
Confidence 56666777665 899999999853
No 91
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=45.64 E-value=24 Score=24.83 Aligned_cols=38 Identities=16% Similarity=0.279 Sum_probs=26.4
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+.+.++|.+|+++| |..+..++.-+. . +.+| .+++.+
T Consensus 76 ~~~~~~aDvVilavp------~~~~~~v~~~l~---~-~~~~--ivi~~~ 113 (220)
T 4huj_A 76 LKDALQADVVILAVP------YDSIADIVTQVS---D-WGGQ--IVVDAS 113 (220)
T ss_dssp HHHHTTSSEEEEESC------GGGHHHHHTTCS---C-CTTC--EEEECC
T ss_pred HHHHhcCCEEEEeCC------hHHHHHHHHHhh---c-cCCC--EEEEcC
Confidence 356788999999999 566777776663 3 5566 345554
No 92
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=45.49 E-value=24 Score=24.22 Aligned_cols=51 Identities=4% Similarity=-0.011 Sum_probs=31.0
Q ss_pred ChhHHHHHHHhcCeEEEEcccCC------------CCCcH---HHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 1 MWLLTYNTFLEFICFHLLTDLFS------------SFVQG---PLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 1 ~~~~~~~~i~~AD~ii~~tPeYn------------~~i~~---~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.|..+.+.+.+. ++-+.++.|- .++.. .+..+++++. ..+.++++.++|.|
T Consensus 57 ~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~---~~~~~~~~~l~G~S 122 (303)
T 3pe6_A 57 RYEELARMLMGL-DLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQ---KDYPGLPVFLLGHS 122 (303)
T ss_dssp GGHHHHHHHHHT-TEEEEEECCTTSTTSCSSTTCCSSTHHHHHHHHHHHHHHH---HHSTTCCEEEEEET
T ss_pred HHHHHHHHHHhC-CCcEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh---hccCCceEEEEEeC
Confidence 377778888765 4555555552 12222 3455555554 24567799999988
No 93
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=44.75 E-value=46 Score=25.42 Aligned_cols=52 Identities=8% Similarity=0.013 Sum_probs=34.7
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----------CcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----------VQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----------i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|.+..+.+. ..|+.+.+|.|-+. --..+..+++|+... ......+++++|.|
T Consensus 172 ~~~~a~~La-~~Gy~V~a~D~rG~g~~~~~~~~~~~~d~~~~~~~l~~~-~~v~~~~i~l~G~S 233 (422)
T 3k2i_A 172 LEYRASLLA-GHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQH-PQVKGPGIGLLGIS 233 (422)
T ss_dssp CCHHHHHHH-TTTCEEEEEECSSSTTSCSSCSCEETHHHHHHHHHHHTS-TTBCCSSEEEEEET
T ss_pred hHHHHHHHH-hCCCEEEEEccCCCCCCCCCcccCCHHHHHHHHHHHHhC-cCcCCCCEEEEEEC
Confidence 445555554 45777777777653 124678899999642 23457899999999
No 94
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=44.50 E-value=19 Score=25.86 Aligned_cols=28 Identities=4% Similarity=0.045 Sum_probs=20.5
Q ss_pred HHHHHHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 28 GPLKNAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 28 ~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
..+..++||+... .....+++.++|.| |
T Consensus 122 ~~~~~~~~~l~~~-~~~~~~~i~l~G~S~G 150 (304)
T 3d0k_A 122 ALVARVLANIRAA-EIADCEQVYLFGHSAG 150 (304)
T ss_dssp HHHHHHHHHHHHT-TSCCCSSEEEEEETHH
T ss_pred HHHHHHHHHHHhc-cCCCCCcEEEEEeChH
Confidence 4588899999641 13456889999998 5
No 95
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=43.57 E-value=25 Score=23.11 Aligned_cols=70 Identities=7% Similarity=-0.133 Sum_probs=40.8
Q ss_pred HHHHHhcCeEEEEcccCCCC---CcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCc
Q 035766 6 YNTFLEFICFHLLTDLFSSF---VQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDL 76 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~---i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~ 76 (128)
...+..||++|++...-+.. -...+++..+|+........++|+.+++.= .-... ...+.++..+...++
T Consensus 92 ~~~~~~~d~~i~v~D~~~~~~~~~~~s~~~l~~~l~~~~~~~~~~piilv~NK~Dl~~~-~~~~~~~~~~~~~~~ 165 (198)
T 3t1o_A 92 KLILRGVDGIVFVADSAPNRLRANAESMRNMRENLAEYGLTLDDVPIVIQVNKRDLPDA-LPVEMVRAVVDPEGK 165 (198)
T ss_dssp HHHTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCTTSSCEEEEEECTTSTTC-CCHHHHHHHHCTTCC
T ss_pred HHHHhcCCEEEEEEECCcchhhHhHHHHHHHHHHHHhhccccCCCCEEEEEEchhcccc-cCHHHHHHHHHhcCC
Confidence 34567899999986544211 234667777787532234578899988863 21111 223445556665565
No 96
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=43.23 E-value=20 Score=24.86 Aligned_cols=49 Identities=8% Similarity=0.066 Sum_probs=31.6
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCC----c---HHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFV----Q---GPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i----~---~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|..+.+.+.+. ++.+++|.|-+.- + ..+..++||+.. ... +++.++|.|
T Consensus 82 ~~~~~~~l~~~-G~~v~~~d~~~~~~~~~~~~~~d~~~~~~~l~~---~~~-~~i~l~G~S 137 (262)
T 2pbl_A 82 WSHLAVGALSK-GWAVAMPSYELCPEVRISEITQQISQAVTAAAK---EID-GPIVLAGHS 137 (262)
T ss_dssp CGGGGHHHHHT-TEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHH---HSC-SCEEEEEET
T ss_pred HHHHHHHHHhC-CCEEEEeCCCCCCCCChHHHHHHHHHHHHHHHH---hcc-CCEEEEEEC
Confidence 55566666544 7788888886542 2 345666777753 222 788999988
No 97
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=42.65 E-value=14 Score=24.29 Aligned_cols=54 Identities=9% Similarity=-0.108 Sum_probs=26.8
Q ss_pred hhHHHHHHHhcCe--EEEEcccCCC---CCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFIC--FHLLTDLFSS---FVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~--ii~~tPeYn~---~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|..+.+.+.+..- +-+.++.|-+ +-...+....+++......+..+++.++|.|
T Consensus 19 ~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S 77 (181)
T 1isp_A 19 FAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHS 77 (181)
T ss_dssp GHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHHHCCSCEEEEEET
T ss_pred HHHHHHHHHHcCCCCccEEEEecCCCCCchhhhHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 6667777776521 1233344432 2222333333333210023455789999988
No 98
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=42.61 E-value=17 Score=27.60 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=22.0
Q ss_pred CCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 45 ADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 45 ~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
.||.|.|||.+ .+|..+..+|+..-..+...++
T Consensus 1 aGKkVvIIG~G--~AG~~aA~~L~~~~~~~~Vtli 33 (401)
T 3vrd_B 1 AGRKVVVVGGG--TGGATAAKYIKLADPSIEVTLI 33 (401)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHHHHCTTSEEEEE
T ss_pred CcCEEEEECCc--HHHHHHHHHHHhcCcCCeEEEE
Confidence 48999999954 5678888888765433334444
No 99
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=42.50 E-value=32 Score=22.98 Aligned_cols=52 Identities=15% Similarity=0.209 Sum_probs=33.0
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC-C----------------------------cHHHHHHHHhhcCCCCcCCCCeEEEE
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF-V----------------------------QGPLKNAIDWASRPPNVWADKAAAIV 52 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~-i----------------------------~~~lKn~iD~l~~~~~~~~~Kp~~~v 52 (128)
|..+.+.+.+. ++.+++|.|-+. - ...+..++||+.. .....+++.++
T Consensus 44 ~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~--~~~~~~~i~l~ 120 (236)
T 1zi8_A 44 MRETVSWLVDQ-GYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARH--QPYSNGKVGLV 120 (236)
T ss_dssp HHHHHHHHHHT-TCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTS--STTEEEEEEEE
T ss_pred HHHHHHHHHhC-CcEEEeccccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHh--ccCCCCCEEEE
Confidence 45566677665 777777776321 1 1256778888864 12214789999
Q ss_pred eec-C
Q 035766 53 SAA-G 56 (128)
Q Consensus 53 ~~s-g 56 (128)
|.| |
T Consensus 121 G~S~G 125 (236)
T 1zi8_A 121 GYSLG 125 (236)
T ss_dssp EETHH
T ss_pred EECcC
Confidence 999 5
No 100
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=42.44 E-value=5.7 Score=28.76 Aligned_cols=52 Identities=2% Similarity=0.040 Sum_probs=32.9
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCC----cH---HHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFV----QG---PLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i----~~---~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
..+.+.+.+ .++.+++|.|.+.- +. .+..+++|+......+..+++.++|.|
T Consensus 102 ~~~~~~l~~-~G~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S 160 (303)
T 4e15_A 102 CSIVGPLVR-RGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHX 160 (303)
T ss_dssp CTTHHHHHH-TTCEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred HHHHHHHHh-CCCEEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeec
Confidence 334455554 48889999987642 22 355677777421024556789999988
No 101
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=42.13 E-value=28 Score=25.66 Aligned_cols=55 Identities=7% Similarity=0.074 Sum_probs=34.9
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----CcHH---HHHHHHhhcCCCCcC-CCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----VQGP---LKNAIDWASRPPNVW-ADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----i~~~---lKn~iD~l~~~~~~~-~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+.-++.+++|.|-+. +|.. ...+++|+......+ ..+++.++|.| |
T Consensus 109 ~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~G 172 (323)
T 3ain_A 109 YDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAG 172 (323)
T ss_dssp THHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHH
T ss_pred HHHHHHHHHHhcCCEEEEecCCCCCCCCCcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCch
Confidence 566667776554677777777543 4544 446677775321233 46789999988 5
No 102
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=41.75 E-value=35 Score=23.27 Aligned_cols=50 Identities=10% Similarity=-0.038 Sum_probs=31.1
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC---C--------C---cHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS---F--------V---QGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~---~--------i---~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|..+.+.+.+. ++-+.+|.|-+ + + -..+..++|++.. ....+++.++|.|
T Consensus 64 ~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~---~~~~~~i~l~G~S 127 (270)
T 3pfb_A 64 LREIANSLRDE-NIASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKT---DPHVRNIYLVGHA 127 (270)
T ss_dssp HHHHHHHHHHT-TCEEEEECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHHT---CTTEEEEEEEEET
T ss_pred HHHHHHHHHhC-CcEEEEEccccccCCCCCCCccCHHHHHHhHHHHHHHHHh---CcCCCeEEEEEeC
Confidence 45556666554 56666666642 1 1 1246677788753 4455699999988
No 103
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=41.25 E-value=41 Score=24.70 Aligned_cols=28 Identities=11% Similarity=-0.092 Sum_probs=18.6
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHH
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAID 35 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD 35 (128)
.+.++++|.||+++|-+ .+...++..-+
T Consensus 58 ~~~~~~aDvVilav~p~--~~~~vl~~l~~ 85 (280)
T 3tri_A 58 RQGALNADVVVLAVKPH--QIKMVCEELKD 85 (280)
T ss_dssp HHHHSSCSEEEECSCGG--GHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeCHH--HHHHHHHHHHh
Confidence 46678899999999863 34444444433
No 104
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=40.27 E-value=62 Score=21.61 Aligned_cols=47 Identities=9% Similarity=0.073 Sum_probs=28.9
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcC--CCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASR--PPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~--~~~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+. ..+.+...|+.. ......++|+.+++.=
T Consensus 91 ~~~~~~~d~iilv~D~~~~---~s~~~~~~~l~~~~~~~~~~~~piilv~NK 139 (192)
T 2b6h_A 91 RHYFQNTQGLIFVVDSNDR---ERVQESADELQKMLQEDELRDAVLLVFANK 139 (192)
T ss_dssp HHHHHTCCEEEEEEETTCG---GGHHHHHHHHHHHHTCGGGTTCEEEEEEEC
T ss_pred HHHhccCCEEEEEEECCCH---HHHHHHHHHHHHHhcccccCCCeEEEEEEC
Confidence 3456899999998766543 334444444421 0024568999888864
No 105
>1w8x_N Protein P31, protein C, GPC; virus, P3 major capsid protein, P30 TAPE measure, P31 penton protein, P16 membrane protein; 4.20A {Enterobacteria phage PRD1} SCOP: i.6.1.1
Probab=40.02 E-value=7.2 Score=25.59 Aligned_cols=11 Identities=18% Similarity=0.452 Sum_probs=9.4
Q ss_pred EcccCCCCCcH
Q 035766 18 LTDLFSSFVQG 28 (128)
Q Consensus 18 ~tPeYn~~i~~ 28 (128)
+||.||+.+|+
T Consensus 11 vtp~YNG~~~~ 21 (126)
T 1w8x_N 11 VTPVYNGCDSG 21 (126)
T ss_dssp CCCCCTTCCSS
T ss_pred EeccccCccCC
Confidence 68999998875
No 106
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=39.82 E-value=21 Score=24.85 Aligned_cols=53 Identities=6% Similarity=0.021 Sum_probs=33.3
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCC--------cH---HHHHHHHhhcCCCCc--CCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFV--------QG---PLKNAIDWASRPPNV--WADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i--------~~---~lKn~iD~l~~~~~~--~~~Kp~~~v~~s 55 (128)
|..+.+.+.+ .++.+++|.|-+.- |. .+..+++|+...... +..+++.++|.|
T Consensus 62 ~~~~~~~l~~-~G~~v~~~d~~g~g~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S 127 (276)
T 3hxk_A 62 SDPLALAFLA-QGYQVLLLNYTVMNKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCS 127 (276)
T ss_dssp SHHHHHHHHH-TTCEEEEEECCCTTSCCCSCTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEH
T ss_pred hHHHHHHHHH-CCCEEEEecCccCCCcCCCCcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeC
Confidence 3445566664 47888888887532 22 356677887531112 456789999998
No 107
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=39.42 E-value=38 Score=24.32 Aligned_cols=34 Identities=18% Similarity=0.043 Sum_probs=21.2
Q ss_pred cCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 43 VWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 43 ~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
.|+||.+.|.|+||..|-.++.. ..|..-|+.|+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA---~~la~~Ga~Vv 36 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVA---KVLDQLGAKLV 36 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHH---HHHHHTTCEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHH---HHHHHCCCEEE
Confidence 58899999999875445333322 12345577765
No 108
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=39.02 E-value=15 Score=26.52 Aligned_cols=54 Identities=6% Similarity=-0.036 Sum_probs=34.1
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC----CCcHH---HHHHHHhhcCCCCc--CCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS----FVQGP---LKNAIDWASRPPNV--WADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~----~i~~~---lKn~iD~l~~~~~~--~~~Kp~~~v~~s 55 (128)
|..+.+.+.+.-++.+++|.|-+ .+|.. +..+++|+...... +..+++.++|.|
T Consensus 93 ~~~~~~~la~~~g~~v~~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S 155 (310)
T 2hm7_A 93 HDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDS 155 (310)
T ss_dssp THHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEET
T ss_pred hHHHHHHHHHhcCCEEEEeCCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEEC
Confidence 56666777665467777777654 34444 45677887532122 235789999988
No 109
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=39.01 E-value=76 Score=21.38 Aligned_cols=57 Identities=9% Similarity=0.138 Sum_probs=31.1
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC-----------CCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHH
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS-----------FVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYH 66 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~-----------~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~ 66 (128)
|..+.+.+.+. +-+.++.|-| ++....+.+.+.+ ..+..+++.++|.| .||.-+...
T Consensus 36 ~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~lvG~S--~Gg~ia~~~ 103 (267)
T 3fla_A 36 FFPLAKALAPA--VEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVL----RPFGDRPLALFGHS--MGAIIGYEL 103 (267)
T ss_dssp GHHHHHHHTTT--EEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHT----GGGTTSCEEEEEET--HHHHHHHHH
T ss_pred HHHHHHHhccC--cEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHH----HhcCCCceEEEEeC--hhHHHHHHH
Confidence 66666776432 5555555532 2333333333333 34567899999999 234444433
No 110
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=38.96 E-value=73 Score=22.60 Aligned_cols=51 Identities=2% Similarity=0.004 Sum_probs=33.8
Q ss_pred ChhHHHHHHHhcCeEEEEcccCCC------------CCc---HHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 1 MWLLTYNTFLEFICFHLLTDLFSS------------FVQ---GPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 1 ~~~~~~~~i~~AD~ii~~tPeYn~------------~i~---~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
+|..+.+.+.+. ++-+.++.|-| ++. ..+..++|++.. .+.++++.++|.|
T Consensus 75 ~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~---~~~~~~v~l~G~S 140 (342)
T 3hju_A 75 RYEELARMLMGL-DLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQK---DYPGLPVFLLGHS 140 (342)
T ss_dssp GGHHHHHHHHTT-TEEEEEECCTTSTTSCSSTTCCSCTHHHHHHHHHHHHHHHH---HSTTCCEEEEEET
T ss_pred hHHHHHHHHHhC-CCeEEEEcCCCCcCCCCcCCCcCcHHHHHHHHHHHHHHHHH---hCCCCcEEEEEeC
Confidence 367777777655 56666666532 222 356777777763 5677899999998
No 111
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=38.38 E-value=69 Score=20.99 Aligned_cols=51 Identities=14% Similarity=0.217 Sum_probs=33.6
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC---CC---------cHHHHHHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS---FV---------QGPLKNAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~---~i---------~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+. ++.+.+|.|-+ +- ...+..++||+.. .+..+++.++|.| |
T Consensus 52 ~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~---~~~~~~i~l~G~S~G 115 (208)
T 3trd_A 52 VTTLAKALDEL-GLKTVRFNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEH---HWSQDDIWLAGFSFG 115 (208)
T ss_dssp HHHHHHHHHHT-TCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHH---HCTTCEEEEEEETHH
T ss_pred HHHHHHHHHHC-CCEEEEEecCCCCCCCCCccchHHHHHHHHHHHHHHHH---hCCCCeEEEEEeCHH
Confidence 45566666664 45555666542 11 2357888888863 4667999999999 5
No 112
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=37.73 E-value=26 Score=22.64 Aligned_cols=72 Identities=8% Similarity=0.061 Sum_probs=37.3
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCC-hHHHHHHHHHhhhhcCceee
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSG-GARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~g-g~~a~~~L~~~l~~~g~~~~ 79 (128)
....+..+|++|++...-+. ..+.+.-.|+.... ..-.++|+.+++.= .-.. .....+.++..+...++.++
T Consensus 81 ~~~~~~~~d~~i~v~d~~~~---~s~~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 155 (179)
T 1z0f_A 81 TRSYYRGAAGALMVYDITRR---STYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFL 155 (179)
T ss_dssp HHHHHHTCSEEEEEEETTCH---HHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred HHHHhccCCEEEEEEeCcCH---HHHHHHHHHHHHHHHhcCCCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEE
Confidence 44567899999998766553 44444444442100 11247888888763 2111 00112345555555565433
No 113
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=37.37 E-value=27 Score=26.37 Aligned_cols=56 Identities=18% Similarity=0.168 Sum_probs=37.8
Q ss_pred hcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCceeec
Q 035766 11 EFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDLHFVN 80 (128)
Q Consensus 11 ~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~~~~~ 80 (128)
+.|.+|++|| |...||.-|.= +-++. .|+|+.++|-+ |. .+-+.|..- .+|-.+++
T Consensus 64 ~pDfvI~isP--N~a~PGP~~AR-E~l~~-----~~iP~IvI~D~p~~----K~kd~l~~~--g~GYIivk 120 (283)
T 1qv9_A 64 EPDFIVYGGP--NPAAPGPSKAR-EMLAD-----SEYPAVIIGDAPGL----KVKDEMEEQ--GLGYILVK 120 (283)
T ss_dssp CCSEEEEECS--CTTSHHHHHHH-HHHHT-----SSSCEEEEEEGGGG----GGHHHHHHT--TCEEEEET
T ss_pred CCCEEEEECC--CCCCCCchHHH-HHHHh-----CCCCEEEEcCCcch----hhHHHHHhc--CCcEEEEe
Confidence 6899999999 89999987653 22221 78999999988 42 233555433 45555554
No 114
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=37.26 E-value=1e+02 Score=21.39 Aligned_cols=65 Identities=9% Similarity=0.023 Sum_probs=48.6
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
..-+.+||+.++.+. +..++.-.-.++...+ .+||+.++--.. .....+...+...+..-+..++
T Consensus 68 ~~NV~DSDgTLI~~~---g~lsGGT~lT~~~a~~-----~~KP~l~i~l~~-~~~~~~~~~v~~wl~~~~i~vL 132 (158)
T 3imk_A 68 EKNVLDSDGTLIISH---GILKGGSALTEFFAEQ-----YKKPCLHIDLDR-ISIEDAATLINSWTVSHHIQVL 132 (158)
T ss_dssp HHHHHTSSEEEEEES---SSCCHHHHHHHHHHHH-----TTCCEEEEETTT-SCHHHHHHHHHHHHHHTTCCEE
T ss_pred HHhhhhcCeEEEEec---CCCCCchHHHHHHHHH-----hCCCEEEEeccc-ccccchHHHHHHHHHHCCceEE
Confidence 455889999999984 6788888777777743 689999998762 2235566777778877777776
No 115
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=37.20 E-value=16 Score=23.47 Aligned_cols=48 Identities=10% Similarity=0.132 Sum_probs=30.8
Q ss_pred HHHHHHHhcCeEEEEcccCCCC-----------CcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 4 LTYNTFLEFICFHLLTDLFSSF-----------VQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~-----------i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+.+.+.+. ++.+.+|.|-+. +...++.+++++.. ....+++.++|.|
T Consensus 24 ~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~G~S 82 (176)
T 2qjw_A 24 ALAEVAERL-GWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARA---ATEKGPVVLAGSS 82 (176)
T ss_dssp HHHHHHHHT-TCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHH---HHTTSCEEEEEET
T ss_pred HHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh---cCCCCCEEEEEEC
Confidence 344555543 577777777432 44556777777753 3345789999998
No 116
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=37.14 E-value=61 Score=23.46 Aligned_cols=55 Identities=5% Similarity=0.033 Sum_probs=35.1
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC----CCcHHH---HHHHHhhcCCCCcC--CCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS----FVQGPL---KNAIDWASRPPNVW--ADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~----~i~~~l---Kn~iD~l~~~~~~~--~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+..++.++++.|-+ .+|..+ ..+++|+......+ ..++++++|.| |
T Consensus 106 ~~~~~~~la~~~g~~V~~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~G 170 (326)
T 3ga7_A 106 HDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAG 170 (326)
T ss_dssp THHHHHHHHHHHCSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHH
T ss_pred hHHHHHHHHHHcCCEEEEeeCCCCCCCCCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHH
Confidence 55666777776678888888754 345554 45666774311223 45789999988 5
No 117
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=37.02 E-value=28 Score=22.64 Aligned_cols=48 Identities=10% Similarity=-0.177 Sum_probs=27.2
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEee
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSA 54 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~ 54 (128)
..+..+|++|++...-+..--..++.+++|+.... ..-.++|+.+++.
T Consensus 68 ~~~~~~d~~ilv~D~~~~~s~~~~~~~~~~i~~~~~~~~~~~piilv~n 116 (178)
T 2iwr_A 68 KFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGT 116 (178)
T ss_dssp HHHHHCSEEEEEEETTCHHHHHHHHHHHHHHHHHHCSSSCCCEEEEEEE
T ss_pred HHHHhCCEEEEEEECcCHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEE
Confidence 34678999999866544322223444444553210 1225789988876
No 118
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=36.72 E-value=47 Score=21.76 Aligned_cols=49 Identities=12% Similarity=-0.055 Sum_probs=28.2
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+..-...++.+++.+... ....++|+.+++.=
T Consensus 82 ~~~~~~~d~ii~v~d~~~~~s~~~~~~~~~~i~~~-~~~~~~p~ilv~nK 130 (195)
T 1x3s_A 82 PSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETY-CTRNDIVNMLVGNK 130 (195)
T ss_dssp HHHHTTCCEEEEEEETTCHHHHHTHHHHHHHHTTC-CSCSCCEEEEEEEC
T ss_pred HHHhccCCEEEEEEECcCHHHHHHHHHHHHHHHHh-cCcCCCcEEEEEEC
Confidence 45578899999987654432222334444444321 12357888888763
No 119
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=36.65 E-value=68 Score=21.01 Aligned_cols=46 Identities=11% Similarity=-0.028 Sum_probs=27.2
Q ss_pred HHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 9 FLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 9 i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
+..+|++|++...-+..--..++..+..+... ....++|+.+++.=
T Consensus 87 ~~~~d~ii~v~d~~~~~s~~~~~~~~~~~~~~-~~~~~~piilv~nK 132 (189)
T 2x77_A 87 FSDTDAVIYVVDSTDRDRMGVAKHELYALLDE-DELRKSLLLIFANK 132 (189)
T ss_dssp STTCCEEEEEEETTCCTTHHHHHHHHHHHHTC-STTTTCEEEEEEEC
T ss_pred hhcCCEEEEEEeCCCHHHHHHHHHHHHHHHhh-hhcCCCeEEEEEEC
Confidence 46899999987765543222333333333221 34568999888864
No 120
>1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2
Probab=36.50 E-value=1.3e+02 Score=23.55 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=28.9
Q ss_pred HHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 28 GPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 28 ~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
..++.+++.+..| .+..| +|+.+|..|=......|..+|+..|..+.
T Consensus 36 ~~~~~~l~~lg~p---~~~~~--vI~VTGTnGKtTT~~~l~~iL~~~G~~vg 82 (442)
T 1o5z_A 36 ERISMLLSKLGNP---HLEYK--TIHIGGTNGKGSVANMVSNILVSQGYRVG 82 (442)
T ss_dssp HHHHHHHHHTTCG---GGSSE--EEEEECSSSHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCc---hhcCC--EEEEECCcCHHHHHHHHHHHHHHCCCCEE
Confidence 3566677777653 33334 44555555555566778888888776543
No 121
>1lnz_A SPO0B-associated GTP-binding protein; GTPase, OBG, stringent factor, stress response, sporulation, large G-protein, structural genomics, PSI; HET: G4P; 2.60A {Bacillus subtilis} SCOP: b.117.1.1 c.37.1.8
Probab=36.36 E-value=38 Score=25.92 Aligned_cols=54 Identities=7% Similarity=-0.151 Sum_probs=34.3
Q ss_pred hhHHHHHHHhcCeEEEEcccCC---CCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFS---SFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn---~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
+...++.+..+|++|++...-+ ...-..++.+++.+..-...+.++|+.++..=
T Consensus 227 ~~~fl~~i~~~d~ll~VvD~s~~~~~~~~~~~~~~~~eL~~~~~~l~~~p~ilV~NK 283 (342)
T 1lnz_A 227 GHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANK 283 (342)
T ss_dssp HHHHHHHHHHCCEEEEEEESSCSSCCCHHHHHHHHHHHHHHSCSSTTTSCBCBEEEC
T ss_pred HHHHHHHHHhccEEEEEEECCcccccChHHHHHHHHHHHHHhhhhhcCCCEEEEEEC
Confidence 3556777888999999988766 23233445555555321134678998887753
No 122
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=36.15 E-value=72 Score=20.12 Aligned_cols=46 Identities=11% Similarity=0.065 Sum_probs=28.3
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCC--CCcCCCCeEEEEeec
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRP--PNVWADKAAAIVSAA 55 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~--~~~~~~Kp~~~v~~s 55 (128)
..+..+|++|++...-+ +..+.+...|+..- .....++|+.+++.=
T Consensus 63 ~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~~~~~~~~~~~piilv~nK 110 (164)
T 1r8s_A 63 HYFQNTQGLIFVVDSND---RERVNEAREELMRMLAEDELRDAVLLVFANK 110 (164)
T ss_dssp HHTTTCSEEEEEEETTC---GGGHHHHHHHHHHHHTCGGGTTCEEEEEEEC
T ss_pred HHhccCCEEEEEEECCC---HHHHHHHHHHHHHHHhchhhcCCeEEEEEEC
Confidence 45688999999876544 33344444444210 024568899888863
No 123
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=36.10 E-value=36 Score=23.87 Aligned_cols=54 Identities=7% Similarity=-0.023 Sum_probs=33.2
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC------CcH---HHHHHHHhhcCCCC--cCCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF------VQG---PLKNAIDWASRPPN--VWADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~------i~~---~lKn~iD~l~~~~~--~~~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+ .++.+++|.|-+. .+. .+..+++|+..... ....+++.++|.| |
T Consensus 69 ~~~~~~~l~~-~G~~v~~~d~~g~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~G 134 (283)
T 3bjr_A 69 AESLAMAFAG-HGYQAFYLEYTLLTDQQPLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVG 134 (283)
T ss_dssp HHHHHHHHHT-TTCEEEEEECCCTTTCSSCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHH
T ss_pred cHHHHHHHHh-CCcEEEEEeccCCCccccCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHH
Confidence 4555666664 5788888888653 233 35667777753111 1334689999998 5
No 124
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=36.07 E-value=28 Score=23.35 Aligned_cols=49 Identities=12% Similarity=0.032 Sum_probs=28.4
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
....+..+|++|++...-+..--..++.+++.+.. ..-.++|+.+++.=
T Consensus 92 ~~~~~~~~d~iilV~D~~~~~s~~~~~~~~~~i~~--~~~~~~piilV~NK 140 (192)
T 2il1_A 92 TSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDK--YASEDAELLLVGNK 140 (192)
T ss_dssp HHHHHHHCSEEEEEEETTCHHHHHTHHHHHHHHHH--HSCTTCEEEEEEEC
T ss_pred HHHHhcCCCEEEEEEECcCHHHHHHHHHHHHHHHH--hcCCCCcEEEEEEC
Confidence 34557889999998776553222223333333322 12247888888863
No 125
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=35.82 E-value=28 Score=22.28 Aligned_cols=48 Identities=13% Similarity=-0.042 Sum_probs=26.9
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+..--..++.+++.+.. ....+.|+.+++.=
T Consensus 73 ~~~~~~~~~~i~v~d~~~~~s~~~~~~~~~~l~~--~~~~~~~iilv~nK 120 (170)
T 1z0j_A 73 PMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQ--HGPPSIVVAIAGNK 120 (170)
T ss_dssp HHHHTTCSEEEEEEETTCHHHHHHHHHHHHHHHH--HSCTTSEEEEEEEC
T ss_pred HhhCcCCCEEEEEEECcCHHHHHHHHHHHHHHHH--hCCCCCcEEEEEEC
Confidence 4557889999998765443222223334443432 12356788777753
No 126
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=35.65 E-value=39 Score=26.67 Aligned_cols=43 Identities=9% Similarity=-0.081 Sum_probs=27.0
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CC
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-GG 57 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~ 57 (128)
+.+.++.||.+|+++|- ..+...+..+.. .+ .+..-+++++ |-
T Consensus 111 l~~al~~ad~ii~avPs------~~~r~~l~~l~~---~~-~~~~~iv~~~KGi 154 (391)
T 4fgw_A 111 LIDSVKDVDIIVFNIPH------QFLPRICSQLKG---HV-DSHVRAISCLKGF 154 (391)
T ss_dssp HHHHHTTCSEEEECSCG------GGHHHHHHHHTT---TS-CTTCEEEECCCSC
T ss_pred HHHHHhcCCEEEEECCh------hhhHHHHHHhcc---cc-CCCceeEEecccc
Confidence 45778999999999995 445555555531 22 2333455666 54
No 127
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=35.65 E-value=21 Score=24.05 Aligned_cols=48 Identities=15% Similarity=0.143 Sum_probs=26.0
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
....+..+|++|++...-+ +..+.+.-.|+..-. ..-.++|+.+++.=
T Consensus 94 ~~~~~~~~d~iilv~d~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~NK 142 (199)
T 2p5s_A 94 AKSYFRKADGVLLLYDVTC---EKSFLNIREWVDMIEDAAHETVPIMLVGNK 142 (199)
T ss_dssp HHHHHHHCSEEEEEEETTC---HHHHHTHHHHHHHHHHHC---CCEEEEEEC
T ss_pred HHHHHhhCCEEEEEEECCC---hHHHHHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 3455788999999876544 334444444432100 11247888888753
No 128
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=35.56 E-value=39 Score=22.35 Aligned_cols=47 Identities=13% Similarity=0.062 Sum_probs=28.3
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+ +..+.+...|+..-. ..-.++|+.+++.=
T Consensus 92 ~~~~~~~d~vi~v~D~~~---~~s~~~~~~~l~~i~~~~~~~~piilv~nK 139 (193)
T 2oil_A 92 SAYYRGAVGALLVFDLTK---HQTYAVVERWLKELYDHAEATIVVMLVGNK 139 (193)
T ss_dssp HHHHTTCCEEEEEEETTC---HHHHHTHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred HHHhccCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCeEEEEEEC
Confidence 455788999999855444 555555555542100 12357888888763
No 129
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=35.54 E-value=81 Score=22.94 Aligned_cols=24 Identities=17% Similarity=0.249 Sum_probs=17.2
Q ss_pred HHhcCeEEEEcccCCCCCcHHHHHHHHh
Q 035766 9 FLEFICFHLLTDLFSSFVQGPLKNAIDW 36 (128)
Q Consensus 9 i~~AD~ii~~tPeYn~~i~~~lKn~iD~ 36 (128)
+.+|| |+++|.- .+...++...++
T Consensus 41 ~~~aD--ilavP~~--ai~~vl~~l~~~ 64 (232)
T 3dfu_A 41 IRDFE--LVVIDAH--GVEGYVEKLSAF 64 (232)
T ss_dssp GGGCS--EEEECSS--CHHHHHHHHHTT
T ss_pred hccCC--EEEEcHH--HHHHHHHHHHHh
Confidence 67899 8888884 677777665543
No 130
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=35.15 E-value=42 Score=24.42 Aligned_cols=54 Identities=6% Similarity=0.003 Sum_probs=33.8
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----CcHH---HHHHHHhhcCCCCc-----CCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----VQGP---LKNAIDWASRPPNV-----WADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----i~~~---lKn~iD~l~~~~~~-----~~~Kp~~~v~~s 55 (128)
|..+.+.+....+++++++.|-+. +|.. +..+++|+...... ..-+++.++|.|
T Consensus 104 ~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S 169 (338)
T 2o7r_A 104 FHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGES 169 (338)
T ss_dssp HHHHHHHHHHHHTCEEEEEECCCTTTTCTTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEET
T ss_pred HHHHHHHHHHHCCcEEEEecCCCCCCCCCchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeC
Confidence 556677777555777888888653 3443 45667777531111 223689999988
No 131
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=35.10 E-value=99 Score=20.56 Aligned_cols=21 Identities=10% Similarity=-0.016 Sum_probs=13.2
Q ss_pred cCCCCeEEEEeecCCCChHHHHH
Q 035766 43 VWADKAAAIVSAAGGSGGARAQY 65 (128)
Q Consensus 43 ~~~~Kp~~~v~~sg~~gg~~a~~ 65 (128)
.+..+++.++|.| .||..+..
T Consensus 86 ~~~~~~~~l~GhS--~Gg~~a~~ 106 (269)
T 4dnp_A 86 ALGIDCCAYVGHS--VSAMIGIL 106 (269)
T ss_dssp HTTCCSEEEEEET--HHHHHHHH
T ss_pred hcCCCeEEEEccC--HHHHHHHH
Confidence 3455789999988 23444443
No 132
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=35.03 E-value=50 Score=23.62 Aligned_cols=69 Identities=12% Similarity=0.098 Sum_probs=36.7
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCc
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDL 76 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~ 76 (128)
|..+++++.+ +.+|+..-+-+......+...|+++.. .=..|++.+.--| | |...+...+...+..+..
T Consensus 35 ~~d~~~~l~~-~rii~l~g~I~~~~a~~i~~~L~~l~~---~~~~k~I~l~InSPG--G~v~ag~~I~~~i~~~~~ 104 (218)
T 1y7o_A 35 SYDIYSRLLK-DRIIMLTGPVEDNMANSVIAQLLFLDA---QDSTKDIYLYVNTPG--GSVSAGLAIVDTMNFIKA 104 (218)
T ss_dssp CEEHHHHHHH-TTEEEEESCBCHHHHHHHHHHHHHHHH---HCTTSCEEEEEEECC--BCHHHHHHHHHHHHHSSS
T ss_pred hhhHHHHhhc-CCEEEEeCEECHHHHHHHHHHHHHHHh---cCCCCCEEEEEECcC--CCHHHHHHHHHHHHhcCC
Confidence 4456677666 455555555555556666677776642 2234666666555 4 333344444444444443
No 133
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=34.98 E-value=94 Score=20.29 Aligned_cols=49 Identities=4% Similarity=-0.113 Sum_probs=29.7
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+..--..++.++.-+... ....++|+.+++.=
T Consensus 78 ~~~~~~~d~ii~v~d~~~~~s~~~~~~~~~~~~~~-~~~~~~piilv~NK 126 (187)
T 1zj6_A 78 NTYYTNTEFVIVVVDSTDRERISVTREELYKMLAH-EDLRKAGLLIFANK 126 (187)
T ss_dssp HHHHTTCCEEEEEEETTCTTTHHHHHHHHHHHHTS-GGGTTCEEEEEEEC
T ss_pred HHHhcCCCEEEEEEeCCCHHHHHHHHHHHHHHHhc-hhhCCCeEEEEEEC
Confidence 34568899999998766653222333344333321 22578999888864
No 134
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=34.66 E-value=72 Score=20.60 Aligned_cols=47 Identities=6% Similarity=0.033 Sum_probs=28.1
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+..+|++|++...-+..--..++..++.+... ....++|+.+++.=
T Consensus 82 ~~~~~d~ii~v~d~~~~~s~~~~~~~~~~~~~~-~~~~~~piilv~nK 128 (183)
T 1moz_A 82 YYADTAAVIFVVDSTDKDRMSTASKELHLMLQE-EELQDAALLVFANK 128 (183)
T ss_dssp TTTTEEEEEEEEETTCTTTHHHHHHHHHHHTTS-STTSSCEEEEEEEC
T ss_pred HhccCCEEEEEEECCCHHHHHHHHHHHHHHHcC-hhhCCCeEEEEEEC
Confidence 356899999987765543223334444443321 22578998888864
No 135
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=34.46 E-value=28 Score=25.47 Aligned_cols=51 Identities=2% Similarity=0.060 Sum_probs=34.0
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCC----cH---HHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFV----QG---PLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i----~~---~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|....+.+....++.+.+|.|-++- +. .+..+++|+.. .+..+++.++|.|
T Consensus 115 ~~~~~~~la~~~g~~vi~~D~r~~~~~~~~~~~~d~~~~~~~l~~---~~~~~~i~l~G~S 172 (326)
T 3d7r_A 115 HWRLLDKITLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVS---EVGHQNVVVMGDG 172 (326)
T ss_dssp HHHHHHHHHHHHCSEEEEECCCCTTTSCHHHHHHHHHHHHHHHHH---HHCGGGEEEEEET
T ss_pred HHHHHHHHHHHhCCEEEEEeCCCCCCCCchHHHHHHHHHHHHHHh---ccCCCcEEEEEEC
Confidence 4555667776667888888887643 22 34555666642 3566789999988
No 136
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=34.44 E-value=1e+02 Score=24.63 Aligned_cols=64 Identities=13% Similarity=-0.034 Sum_probs=40.8
Q ss_pred HHHHHhcCeEEEEcccCCCCCc---HHHHHHHHhhcCCCCcC-CCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQ---GPLKNAIDWASRPPNVW-ADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~---~~lKn~iD~l~~~~~~~-~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
.-|+..+|.+++.|+ |. .+. .......|.+.. .| .-|++.-+.++|.+.+ ++..++..+|-.++
T Consensus 289 l~RlaG~D~ih~gt~-~G-K~~~~~~~~~~~~~~~~q---~w~~~~~~~PV~SGGih~~-----~~p~~~~~~G~D~v 356 (414)
T 3fk4_A 289 LLRYAGADFSLFPSP-YG-SVALEKEEALAISKYLTE---DDASFKKSFSVPSAGIHPG-----FVPFIVRDFGKDVV 356 (414)
T ss_dssp HHHHHTCSEEEEECC-C-------CHHHHHHHHHHHS---CCTTSCCCEEEEESSCCGG-----GHHHHHHHHCSSBE
T ss_pred HHHhhCCCccccCCc-cC-CcCCCHHHHHHHHHHHcC---ccccCCCceeecCCCCCHh-----HHHHHHHHhCCcEE
Confidence 568999999999999 54 233 345666777764 45 4678877776665543 34555667775444
No 137
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=34.28 E-value=1.4e+02 Score=23.77 Aligned_cols=33 Identities=6% Similarity=-0.229 Sum_probs=20.2
Q ss_pred HHHHHhcCeEEEE--cccC---CCCCcHHHHHHHHhhc
Q 035766 6 YNTFLEFICFHLL--TDLF---SSFVQGPLKNAIDWAS 38 (128)
Q Consensus 6 ~~~i~~AD~ii~~--tPeY---n~~i~~~lKn~iD~l~ 38 (128)
.+.+++||.+|++ ||.- +.-=-..++.+++-+.
T Consensus 79 ~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~ 116 (446)
T 4a7p_A 79 AEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIA 116 (446)
T ss_dssp HHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHH
T ss_pred HHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHH
Confidence 3678899999999 5542 1111125666666554
No 138
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=34.18 E-value=36 Score=21.62 Aligned_cols=47 Identities=13% Similarity=0.114 Sum_probs=28.0
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEee
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSA 54 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~ 54 (128)
....+..+|++|++...-+ +..+.+...|+..-. ..-.++|+.+++.
T Consensus 69 ~~~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~~~~~~~~~~piilv~n 116 (170)
T 1ek0_A 69 APXYYRNAQAALVVYDVTK---PQSFIKARHWVKELHEQASKDIIIALVGN 116 (170)
T ss_dssp HHHHHTTCSEEEEEEETTC---HHHHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hhhhhccCcEEEEEEecCC---hHHHHHHHHHHHHHHHhcCCCCcEEEEEE
Confidence 3455778999999876544 445555555553100 1125778877775
No 139
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=34.18 E-value=86 Score=24.40 Aligned_cols=36 Identities=8% Similarity=-0.105 Sum_probs=25.3
Q ss_pred hHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcC
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASR 39 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~ 39 (128)
.+....+.+||++|++..--++ ++..-+...+++.+
T Consensus 74 ~~~~~~~~~ad~il~vvD~~~~-~~~~d~~~~~~l~~ 109 (436)
T 2hjg_A 74 QQAEIAMDEADVIIFMVNGREG-VTAADEEVAKILYR 109 (436)
T ss_dssp HHHHHHHHHCSEEEEEEETTTC-SCHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCEEEEEEeCCCC-CCHHHHHHHHHHHH
Confidence 3456678899999999887664 45555566677743
No 140
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=34.01 E-value=1e+02 Score=20.28 Aligned_cols=57 Identities=12% Similarity=0.047 Sum_probs=34.4
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC-CCc---------------HHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHH
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS-FVQ---------------GPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQY 65 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~-~i~---------------~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~ 65 (128)
|..+.+.+.+. ++-+.+|.|-+ +-+ ..+..++|++.. . .+++.++|.| .||..+..
T Consensus 38 ~~~~~~~l~~~-G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~---~--~~~~~l~G~S--~Gg~~a~~ 109 (251)
T 3dkr_A 38 MNFMARALQRS-GYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTA---K--YAKVFVFGLS--LGGIFAMK 109 (251)
T ss_dssp GHHHHHHHHHT-TCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHT---T--CSEEEEEESH--HHHHHHHH
T ss_pred HHHHHHHHHHC-CCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHH---h--cCCeEEEEec--hHHHHHHH
Confidence 66677777755 55556666542 222 245666777764 2 7799999988 23444443
Q ss_pred H
Q 035766 66 H 66 (128)
Q Consensus 66 ~ 66 (128)
.
T Consensus 110 ~ 110 (251)
T 3dkr_A 110 A 110 (251)
T ss_dssp H
T ss_pred H
Confidence 3
No 141
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=33.93 E-value=26 Score=23.32 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=25.0
Q ss_pred eEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 14 CFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 14 ~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
++=+.+|.+.+..-...+.+.+++ ..+..+++.++|.| |
T Consensus 33 ~~~v~~pdl~~~g~~~~~~l~~~~----~~~~~~~i~l~G~SmG 72 (202)
T 4fle_A 33 HIEMQIPQLPPYPAEAAEMLESIV----MDKAGQSIGIVGSSLG 72 (202)
T ss_dssp TSEEECCCCCSSHHHHHHHHHHHH----HHHTTSCEEEEEETHH
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHH----HhcCCCcEEEEEEChh
Confidence 356778888765433333333333 35678899999999 6
No 142
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=33.76 E-value=1.4e+02 Score=21.98 Aligned_cols=64 Identities=6% Similarity=-0.057 Sum_probs=33.5
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHH--hhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceeecc
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAID--WASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFVNK 81 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD--~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~~~ 81 (128)
.+.++++|.||+++|.. ..++..++ -+. ....++.+.-+++ ......+ .+...+...|...++.
T Consensus 60 ~e~~~~aDvVi~~vp~~-----~~~~~v~~~~~l~---~~~~g~ivid~st-~~~~~~~---~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 60 KAALSASPATIFVLLDN-----HATHEVLGMPGVA---RALAHRTIVDYTT-NAQDEGL---ALQGLVNQAGGHYVKG 125 (306)
T ss_dssp HHHHHHSSEEEECCSSH-----HHHHHHHTSTTHH---HHTTTCEEEECCC-CCTTHHH---HHHHHHHHTTCEEEEE
T ss_pred HHHHhcCCEEEEEeCCH-----HHHHHHhcccchh---hccCCCEEEECCC-CCHHHHH---HHHHHHHHcCCeEEec
Confidence 45678899999999853 34666664 332 2234554433332 2222222 2333344456666643
No 143
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=33.48 E-value=76 Score=20.91 Aligned_cols=46 Identities=4% Similarity=-0.046 Sum_probs=28.1
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCC--CCcCCCCeEEEEeec
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRP--PNVWADKAAAIVSAA 55 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~--~~~~~~Kp~~~v~~s 55 (128)
..+..+|++|++...-+ +..+.++.+|+..- .....++|+.+++.=
T Consensus 86 ~~~~~~d~ii~v~D~~~---~~s~~~~~~~~~~~~~~~~~~~~piilv~NK 133 (188)
T 1zd9_A 86 RYCRGVSAIVYMVDAAD---QEKIEASKNELHNLLDKPQLQGIPVLVLGNK 133 (188)
T ss_dssp HHHTTCSEEEEEEETTC---GGGHHHHHHHHHHHHTCGGGTTCCEEEEEEC
T ss_pred HHHccCCEEEEEEECCC---HHHHHHHHHHHHHHHhCcccCCCCEEEEEEC
Confidence 44688999999976554 33444444444210 023468898888864
No 144
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=33.29 E-value=1.3e+02 Score=23.46 Aligned_cols=53 Identities=21% Similarity=0.328 Sum_probs=29.9
Q ss_pred EEeecCCCChHHHHHHHHHhhhhcCcee--eccceeeeccCCCCCccCCCCCCCCHHHH
Q 035766 51 IVSAAGGSGGARAQYHLRQIGVYLDLHF--VNKPEYFLNAFQPPAKFDSDGNLIDEESK 107 (128)
Q Consensus 51 ~v~~sg~~gg~~a~~~L~~~l~~~g~~~--~~~~~~~i~~~~~~~~fd~~g~l~~~~~~ 107 (128)
+|+++|..|=......|..+|+..|-.+ +..|. +..+ .+.+.=+|...+++..
T Consensus 54 vI~VtGTNGKgSt~~~l~~iL~~~G~~vg~~tSph--l~~~--neri~i~g~~i~~~~~ 108 (437)
T 3nrs_A 54 IFTVAGTNGKGTTCCTLEAILLAAGLRVGVYSSPH--LLRY--TERVRIQGQELSEAEH 108 (437)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTCCEEEECCCC--SSCG--GGGEEETTEECCHHHH
T ss_pred EEEEECCcChHHHHHHHHHHHHHCCCcEEEECCCC--cCCc--ceEEEECCEECCHHHH
Confidence 4555555554566678899998877765 22221 1111 3444446777776543
No 145
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=33.20 E-value=43 Score=22.28 Aligned_cols=71 Identities=10% Similarity=0.008 Sum_probs=38.1
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCC-hHHHHHHHHHhhhhcCceee
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSG-GARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~g-g~~a~~~L~~~l~~~g~~~~ 79 (128)
...+..+|++|++...-+ +..+.++..|+..-. ....++|+.+++.= .-.. .....+.++..+...++.++
T Consensus 90 ~~~~~~~d~iilV~d~~~---~~s~~~~~~~~~~i~~~~~~~~piiiv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 163 (192)
T 2fg5_A 90 PMYYRGSAAAVIVYDITK---QDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVV 163 (192)
T ss_dssp HHHHTTCSEEEEEEETTC---THHHHHHHHHHHHHHHHSCTTCEEEEEEECGGGGGGCCSCHHHHHHHHHTTTCEEE
T ss_pred HHhhccCCEEEEEEeCCC---HHHHHHHHHHHHHHHHhCCCCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEE
Confidence 456788999999977655 445555555543100 11247888888763 2111 01112345555555665433
No 146
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=33.18 E-value=73 Score=20.20 Aligned_cols=47 Identities=6% Similarity=-0.077 Sum_probs=27.5
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+..+|++|++...-+..--..++..+..+... ....++|+.+++.=
T Consensus 71 ~~~~~d~ii~v~d~~~~~s~~~~~~~~~~~~~~-~~~~~~piilv~nK 117 (171)
T 1upt_A 71 YYSNTDAVIYVVDSCDRDRIGISKSELVAMLEE-EELRKAILVVFANK 117 (171)
T ss_dssp GCTTCSEEEEEEETTCCTTHHHHHHHHHHHHTC-GGGTTCEEEEEEEC
T ss_pred HhccCCEEEEEEECCCHHHHHHHHHHHHHHHhc-hhhCCCEEEEEEEC
Confidence 356899999987765543222233333333221 23478999888864
No 147
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=33.18 E-value=30 Score=23.06 Aligned_cols=72 Identities=15% Similarity=0.262 Sum_probs=37.7
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCCh-HHHHHHHHHhhhhcCceee
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSGG-ARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~gg-~~a~~~L~~~l~~~g~~~~ 79 (128)
....+..+|++|++...-+ +..+.+.-.|+..-. ....++|+.+++.= .-... .......+......|+..+
T Consensus 89 ~~~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 163 (191)
T 3dz8_A 89 TTAYYRGAMGFILMYDITN---EESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFF 163 (191)
T ss_dssp HHHHHTTCCEEEEEEETTC---HHHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred HHHHHccCCEEEEEEECcC---HHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCeEE
Confidence 3456788999999866544 444444444442100 12357898888763 21111 1112334445555666443
No 148
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=33.17 E-value=1.5e+02 Score=22.85 Aligned_cols=45 Identities=11% Similarity=0.022 Sum_probs=26.8
Q ss_pred HHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCcee
Q 035766 29 PLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHF 78 (128)
Q Consensus 29 ~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~ 78 (128)
-++.+++.+..| -...+ +|+++|..|=......+..+|+..|..+
T Consensus 34 r~~~~l~~lg~p---~~~~~--vI~VTGTnGKtTT~~~l~~iL~~~G~~~ 78 (422)
T 1w78_A 34 RVSLVAARLGVL---KPAPF--VFTVAGTNGKGTTCRTLESILMAAGYKV 78 (422)
T ss_dssp HHHHHHHHHTCS---SCSSE--EEEEECSSCHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHcCCc---ccCCc--EEEEeCCcChHHHHHHHHHHHHHCCCCE
Confidence 355666777642 23333 4444555555556677888898877654
No 149
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=33.03 E-value=67 Score=24.28 Aligned_cols=15 Identities=0% Similarity=-0.124 Sum_probs=12.5
Q ss_pred HHHHhcCeEEEEccc
Q 035766 7 NTFLEFICFHLLTDL 21 (128)
Q Consensus 7 ~~i~~AD~ii~~tPe 21 (128)
+.+++||.||.++||
T Consensus 83 eav~~aDlVieavpe 97 (319)
T 2dpo_A 83 EAVEGVVHIQECVPE 97 (319)
T ss_dssp HHTTTEEEEEECCCS
T ss_pred HHHhcCCEEEEeccC
Confidence 457789999999987
No 150
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=32.91 E-value=1.1e+02 Score=23.87 Aligned_cols=45 Identities=9% Similarity=-0.066 Sum_probs=31.8
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEee
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSA 54 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~ 54 (128)
+....+.+||++|++.+--+ +++..-+.+.+++.+ .+||+.++..
T Consensus 95 ~~~~~~~~ad~il~VvD~~~-~~~~~d~~l~~~l~~-----~~~pvilV~N 139 (456)
T 4dcu_A 95 QAEIAMDEADVIIFMVNGRE-GVTAADEEVAKILYR-----TKKPVVLAVN 139 (456)
T ss_dssp HHHHHHHHCSEEEEEEESSS-CSCHHHHHHHHHHTT-----CCSCEEEEEE
T ss_pred HHHhhHhhCCEEEEEEeCCC-CCChHHHHHHHHHHH-----cCCCEEEEEE
Confidence 44566789999999988544 577777788888853 3566665553
No 151
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=32.83 E-value=17 Score=26.08 Aligned_cols=55 Identities=7% Similarity=0.065 Sum_probs=34.4
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----CcHH---HHHHHHhhcCCCCcC--CCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----VQGP---LKNAIDWASRPPNVW--ADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----i~~~---lKn~iD~l~~~~~~~--~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+.-++.+++|.|-+. .|.. +..+++|+......+ ..+++.++|.| |
T Consensus 92 ~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~G 156 (311)
T 2c7b_A 92 HDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAG 156 (311)
T ss_dssp GHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHH
T ss_pred hHHHHHHHHHhcCCEEEEecCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCcc
Confidence 556667776655778888888653 4544 455677775311112 33689999988 5
No 152
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=32.68 E-value=1e+02 Score=20.24 Aligned_cols=49 Identities=6% Similarity=-0.137 Sum_probs=27.7
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+..--..++..++.+... ....++|+.+++.=
T Consensus 78 ~~~~~~~~~~i~v~d~~~~~s~~~~~~~~~~~~~~-~~~~~~piilv~NK 126 (181)
T 1fzq_A 78 RSYFENTDILIYVIDSADRKRFEETGQELTELLEE-EKLSCVPVLIFANK 126 (181)
T ss_dssp HHHHTTCSEEEEEEETTCGGGHHHHHHHHHHHTTC-GGGTTCCEEEEEEC
T ss_pred HHHhCCCCEEEEEEECcCHHHHHHHHHHHHHHHhC-hhhcCCCEEEEEEC
Confidence 34567899999986654432112233333333220 23568899888863
No 153
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=32.63 E-value=28 Score=25.54 Aligned_cols=53 Identities=9% Similarity=0.027 Sum_probs=34.1
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----CcHHHH---HHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----VQGPLK---NAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----i~~~lK---n~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
|......+.+.-++.++++.|-++ +|..+. .+++|+.. ..+..+++.++|.| |
T Consensus 99 ~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~--~~~d~~ri~l~G~S~G 159 (322)
T 3fak_A 99 HRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLD--QGFKPQHLSISGDSAG 159 (322)
T ss_dssp HHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHH--HTCCGGGEEEEEETHH
T ss_pred HHHHHHHHHHhcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHHHHH--cCCCCceEEEEEcCcC
Confidence 344556666655777888888543 455544 55667653 23556789999988 5
No 154
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=32.63 E-value=1.1e+02 Score=22.12 Aligned_cols=16 Identities=0% Similarity=-0.371 Sum_probs=12.7
Q ss_pred HHHHhcCeEEEEcccC
Q 035766 7 NTFLEFICFHLLTDLF 22 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeY 22 (128)
+.+++||.+|.+.|+.
T Consensus 81 ~~~~~aDlVi~av~~~ 96 (283)
T 4e12_A 81 QAVKDADLVIEAVPES 96 (283)
T ss_dssp HHTTTCSEEEECCCSC
T ss_pred HHhccCCEEEEeccCc
Confidence 3467889999999885
No 155
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=32.51 E-value=22 Score=25.89 Aligned_cols=55 Identities=11% Similarity=0.013 Sum_probs=34.9
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----CcHH---HHHHHHhhcCCCCc--CCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----VQGP---LKNAIDWASRPPNV--WADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----i~~~---lKn~iD~l~~~~~~--~~~Kp~~~v~~s-g 56 (128)
|....+.+.+.-++.+++|.|-+. .|.. +..+++|+...... ...+++.++|.| |
T Consensus 98 ~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~G 162 (323)
T 1lzl_A 98 SDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAG 162 (323)
T ss_dssp GHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHH
T ss_pred hHHHHHHHHHhcCcEEEEecCCCCCCCCCCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCch
Confidence 455666777666888888888653 4444 45667777531011 234689999988 5
No 156
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=32.01 E-value=25 Score=23.83 Aligned_cols=60 Identities=12% Similarity=0.066 Sum_probs=31.2
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC----------CCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHH
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS----------FVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYH 66 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~----------~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~ 66 (128)
|..+.+.+.+..++-+.+|.+-| ++....+.+.+++. ..+..+++.++|.| .||..+...
T Consensus 37 ~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~l~G~S--~Gg~~a~~~ 106 (272)
T 3fsg_A 37 TCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIEAIE---EIIGARRFILYGHS--YGGYLAQAI 106 (272)
T ss_dssp HHHHHTTSTTSTTSEEEEECCTTSTTCCCCSSCSHHHHHHHHHHHHH---HHHTTCCEEEEEEE--HHHHHHHHH
T ss_pred HHHHHHHHhccCceEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH---HHhCCCcEEEEEeC--chHHHHHHH
Confidence 44455555443455555666543 33333444444442 12456889999998 234444433
No 157
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=31.84 E-value=36 Score=22.13 Aligned_cols=54 Identities=17% Similarity=0.311 Sum_probs=27.3
Q ss_pred hhH--HHHHHHhcCeEEEEcccCCCC-Cc-------H---HHHHHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 2 WLL--TYNTFLEFICFHLLTDLFSSF-VQ-------G---PLKNAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~--~~~~i~~AD~ii~~tPeYn~~-i~-------~---~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
|.. +.+.+.+. ++.+.+|.|.+. -+ . .+....+.+......+..+++.++|.| |
T Consensus 43 ~~~~~~~~~l~~~-G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 110 (207)
T 3bdi_A 43 WDKADLFNNYSKI-GYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMG 110 (207)
T ss_dssp GGGGTHHHHHHTT-TEEEEEECCTTSTTSCCCTTTCCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHH
T ss_pred cchHHHHHHHHhC-CCeEEEEcCCcccccCcccCCCCCcchHHHHHHHHHHHHHHcCCCceEEEEECcc
Confidence 445 56666654 566666666521 11 0 233333332210023445789999988 5
No 158
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=31.68 E-value=42 Score=21.29 Aligned_cols=46 Identities=9% Similarity=0.104 Sum_probs=27.2
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEee
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSA 54 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~ 54 (128)
...+..+|++|++...-+ +..+.+.-.|+..-. ....+.|+.+++.
T Consensus 73 ~~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~~~~~~~~~~~iilv~n 119 (170)
T 1r2q_A 73 PMYYRGAQAAIVVYDITN---EESFARAKNWVKELQRQASPNIVIALSGN 119 (170)
T ss_dssp HHHHTTCSEEEEEEETTC---HHHHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred HHhccCCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCcEEEEEE
Confidence 455778999999876544 344555545542100 1234678877775
No 159
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=31.60 E-value=11 Score=27.17 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=8.9
Q ss_pred EcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecC
Q 035766 18 LTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAG 56 (128)
Q Consensus 18 ~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg 56 (128)
..|||++.-+...+. ..|...+.+|.+.|.|+++
T Consensus 2 ~~~~~~~~~~~~~~~-----~~p~~~~~~k~vlITGas~ 35 (269)
T 3gk3_A 2 AHHHHHHMGTLEAQT-----QGPGSMQAKRVAFVTGGMG 35 (269)
T ss_dssp ---------------------------CCCEEEETTTTS
T ss_pred CCCCCCCCCccCcCc-----CCchhhhcCCEEEEECCCc
Confidence 357777766665554 3344567888888777663
No 160
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=31.45 E-value=18 Score=23.25 Aligned_cols=50 Identities=12% Similarity=-0.034 Sum_probs=25.7
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+..-...++.+++.+........++|+.+++.=
T Consensus 69 ~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~pii~v~nK 118 (172)
T 2erx_A 69 RLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNK 118 (172)
T ss_dssp HHHHHHCSEEEEEEETTCHHHHHTTHHHHHHHHHHHC---CCCEEEEEEC
T ss_pred HHhcccCCEEEEEEECcCHHHHHHHHHHHHHHHHHhCCCCCCCEEEEEEc
Confidence 34567899999986654422122233333333210023457888888763
No 161
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=31.37 E-value=24 Score=22.85 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=28.5
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+..+|++|++...-+ +..+.+.-.|+..-.....++|+.+++.=
T Consensus 78 ~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~~~~~~~~~p~ilv~nK 122 (181)
T 3tw8_B 78 YYRGTHGVIVVYDVTS---AESFVNVKRWLHEINQNCDDVCRILVGNK 122 (181)
T ss_dssp GGTTCSEEEEEEETTC---HHHHHHHHHHHHHHHHHCTTSEEEEEEEC
T ss_pred HhccCCEEEEEEECCC---HHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 3577999999876655 55666655555321123457888888763
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=31.29 E-value=22 Score=28.04 Aligned_cols=51 Identities=18% Similarity=0.266 Sum_probs=33.3
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC--C----------------cHHHHHHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF--V----------------QGPLKNAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~--i----------------~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
|....+.+.+. ++.+++|.|-++ . -.-+..++||+.. ....+ +++++|.| |
T Consensus 378 ~~~~~~~l~~~-G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~--~~~~d-~i~l~G~S~G 447 (582)
T 3o4h_A 378 WDTFAASLAAA-GFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARE--SGLAS-ELYIMGYSYG 447 (582)
T ss_dssp CCHHHHHHHHT-TCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHH--TTCEE-EEEEEEETHH
T ss_pred cCHHHHHHHhC-CCEEEEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHh--CCCcc-eEEEEEECHH
Confidence 45556666554 888999999873 1 1246677777754 22223 89999988 5
No 163
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=31.10 E-value=26 Score=25.67 Aligned_cols=53 Identities=9% Similarity=0.003 Sum_probs=34.4
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----CcHHH---HHHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----VQGPL---KNAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----i~~~l---Kn~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
|..+...+.+.-++.+.+|.|-+. +|..+ ..+++|+.. ..+..+++.++|.| |
T Consensus 99 ~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~d~~~a~~~l~~--~~~~~~~i~l~G~S~G 159 (322)
T 3k6k_A 99 HLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRALLK--TAGSADRIIIAGDSAG 159 (322)
T ss_dssp HHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHH--HHSSGGGEEEEEETHH
T ss_pred HHHHHHHHHHhcCCEEEEeeCCCCCCCCCchHHHHHHHHHHHHHH--cCCCCccEEEEecCcc
Confidence 344556666555788888888753 34444 456677753 22566789999998 5
No 164
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=31.05 E-value=1.1e+02 Score=22.63 Aligned_cols=40 Identities=13% Similarity=0.028 Sum_probs=25.1
Q ss_pred CCeEEEEeecCCCC--hHHHHHHHHHhhhhcCceeeccceeeecc
Q 035766 46 DKAAAIVSAAGGSG--GARAQYHLRQIGVYLDLHFVNKPEYFLNA 88 (128)
Q Consensus 46 ~Kp~~~v~~sg~~g--g~~a~~~L~~~l~~~g~~~~~~~~~~i~~ 88 (128)
.|.|+.+...-.+| |..+ .+. .+..+|+.+.+.+.+.+++
T Consensus 3 ~~~VLsI~~~~~~G~~G~~a--a~~-~l~~~G~~v~~~~T~~~Sn 44 (300)
T 3zs7_A 3 EKTVLSIQSFVTHGYVGNKA--ATF-PLQLHGFDVDGINTVCLSN 44 (300)
T ss_dssp CCEEEEEEEEESSSSCHHHH--HHH-HHHHTTCEEEEEEEEEESS
T ss_pred CCeEEEEeCccCCCcchHHH--HHH-HHHHcCCeeEEeeeEEecC
Confidence 46777776652233 3443 232 3678899988877876664
No 165
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=31.00 E-value=92 Score=20.27 Aligned_cols=47 Identities=4% Similarity=-0.112 Sum_probs=27.5
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+..+|++|++...-+..--..+++.+..+... ....++|+.+++.=
T Consensus 85 ~~~~~d~ii~v~D~~~~~s~~~~~~~~~~~~~~-~~~~~~piilv~NK 131 (181)
T 2h17_A 85 YYTNTEFVIVVVDSTDRERISVTREELYKMLAH-EDLRKAGLLIFANK 131 (181)
T ss_dssp GGTTCCEEEEEEETTCTTTHHHHHHHHHHHHTC-GGGTTCEEEEEEEC
T ss_pred HhccCCEEEEEEECCCHHHHHHHHHHHHHHHhC-hhhCCCeEEEEEEC
Confidence 457899999997766542222233333333220 12578998888864
No 166
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=30.72 E-value=1.2e+02 Score=22.01 Aligned_cols=39 Identities=8% Similarity=-0.113 Sum_probs=25.4
Q ss_pred CeEEEEeecCCCCh--HHHHHHHHHhhhhcCceeeccceeeecc
Q 035766 47 KAAAIVSAAGGSGG--ARAQYHLRQIGVYLDLHFVNKPEYFLNA 88 (128)
Q Consensus 47 Kp~~~v~~sg~~gg--~~a~~~L~~~l~~~g~~~~~~~~~~i~~ 88 (128)
|.|+.++.+-.+|+ ..+. -.++..+|..+.+.+...++.
T Consensus 5 ~~vl~I~~~~~~G~~g~~a~---~~~l~~~G~~~~~~~T~~~s~ 45 (289)
T 3pzs_A 5 KNILSIQSHVVFGHAGNSAA---EFPMRRMGVNVWPLNTVQFSN 45 (289)
T ss_dssp CEEEEEEEEESSSCSTHHHH---HHHHHHTTCEEEEEEEEEESS
T ss_pred CeEEEEecccCCCccchHHH---HHHHHHcCCeEEEeeeEEcCC
Confidence 67777777622333 3332 356788999988877776654
No 167
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=30.69 E-value=24 Score=24.84 Aligned_cols=25 Identities=8% Similarity=0.062 Sum_probs=17.9
Q ss_pred HHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 30 LKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 30 lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
+..++||+... ..+..++++++|.|
T Consensus 157 ~~~~~~~l~~~-~~~d~~~i~l~G~S 181 (318)
T 1l7a_A 157 AVRALEVISSF-DEVDETRIGVTGGS 181 (318)
T ss_dssp HHHHHHHHHHS-TTEEEEEEEEEEET
T ss_pred HHHHHHHHHhC-CCcccceeEEEecC
Confidence 67788888631 23445789999988
No 168
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=30.45 E-value=26 Score=27.29 Aligned_cols=33 Identities=6% Similarity=-0.205 Sum_probs=27.9
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcC
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASR 39 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~ 39 (128)
.+..+.||.+|+-||. -+.-+...|+++|++..
T Consensus 136 ~EAvk~AEi~IlftPf-G~~t~~Iakkii~~lpE 168 (358)
T 2b0j_A 136 REAVEGADIVITWLPK-GNKQPDIIKKFADAIPE 168 (358)
T ss_dssp HHHHTTCSEEEECCTT-CTTHHHHHHHHGGGSCT
T ss_pred HHHhcCCCEEEEecCC-CCCcHHHHHHHHhhCcC
Confidence 4788999999999998 44467889999999964
No 169
>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=30.33 E-value=1.5e+02 Score=22.91 Aligned_cols=69 Identities=13% Similarity=0.167 Sum_probs=35.8
Q ss_pred HHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee--ccceeeeccCCCCCccCCCCCCCCHHH
Q 035766 29 PLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV--NKPEYFLNAFQPPAKFDSDGNLIDEES 106 (128)
Q Consensus 29 ~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~--~~~~~~i~~~~~~~~fd~~g~l~~~~~ 106 (128)
-.+.+++.+..| ...-| +|+++|..|=......+..+|+..|..+. ..|. +..+ .+.+.-+|...+++.
T Consensus 24 ~~~~~l~~lg~p--~~~~~---vI~VtGTnGKtTT~~~l~~iL~~~G~~vg~~~sp~--l~~~--~eri~i~g~~i~~~~ 94 (428)
T 1jbw_A 24 RILTLLHALGNP--QQQGR---YIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPF--IMRF--NERIMIDHEPIPDAA 94 (428)
T ss_dssp HHHHHHHHTTCG--GGSSC---EEEEECSSCHHHHHHHHHHHHHHTTCCEEEECSSC--SSCG--GGGEEETTEECCHHH
T ss_pred HHHHHHHHcCCc--hhcCc---EEEEECCCChHHHHHHHHHHHHHCCCCEEEEeCCc--cCcc--ceEEEECCEECCHHH
Confidence 455666677653 22333 34444544545556778888888776543 1111 1111 233433677776553
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=30.20 E-value=60 Score=25.82 Aligned_cols=52 Identities=6% Similarity=-0.095 Sum_probs=33.7
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCC------------------cHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFV------------------QGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i------------------~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|....+.+.+ .|+.+++|.|-++- -.-+..+++|+... .....++++++|.|
T Consensus 442 ~~~~~~~l~~-~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~~i~l~G~S 511 (662)
T 3azo_A 442 LDLDVAYFTS-RGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEE-GTADRARLAVRGGS 511 (662)
T ss_dssp CCHHHHHHHT-TTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHT-TSSCTTCEEEEEET
T ss_pred chHHHHHHHh-CCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHc-CCcChhhEEEEEEC
Confidence 4445555544 47888899998732 13456677777531 23566789999988
No 171
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=30.19 E-value=76 Score=23.80 Aligned_cols=53 Identities=8% Similarity=0.025 Sum_probs=33.3
Q ss_pred hHHHHHHHhcCeEEEEcccCCCC----CcHHH---HHHHHhhc-CCCC--cCCCC-eEEEEeec
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSF----VQGPL---KNAIDWAS-RPPN--VWADK-AAAIVSAA 55 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~----i~~~l---Kn~iD~l~-~~~~--~~~~K-p~~~v~~s 55 (128)
..+.+++.+.-+++++++.|-.+ +|..+ ..+++|+. .... ...-. ++.++|.|
T Consensus 134 ~~~~~~la~~~g~~Vv~~dyR~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S 197 (365)
T 3ebl_A 134 DSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDS 197 (365)
T ss_dssp HHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEET
T ss_pred HHHHHHHHHHCCCEEEEeeCCCCCCCCCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeC
Confidence 34556666655788888888654 45554 46778885 2111 22344 89999988
No 172
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=30.16 E-value=1.3e+02 Score=23.16 Aligned_cols=51 Identities=4% Similarity=0.057 Sum_probs=33.7
Q ss_pred hHHHHHHHhcCeEEEEcccCCCC--C--------cHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 3 LLTYNTFLEFICFHLLTDLFSSF--V--------QGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 3 ~~~~~~i~~AD~ii~~tPeYn~~--i--------~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+..+.+. +.|+.+.+|.|-+. . -..+..++||+... ......+++++|.|
T Consensus 189 ~~~a~~La-~~Gy~Vla~D~rG~~~~~~~~~~~~~~d~~~a~~~l~~~-~~vd~~~i~l~G~S 249 (446)
T 3hlk_A 189 EYRASLLA-GKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSH-PEVKGPGVGLLGIS 249 (446)
T ss_dssp CHHHHHHH-TTTCEEEEECCSSSTTSCSCCSEEEHHHHHHHHHHHHTS-TTBCCSSEEEEEET
T ss_pred hHHHHHHH-hCCCEEEEeccCCCCCCCcchhhCCHHHHHHHHHHHHhC-CCCCCCCEEEEEEC
Confidence 34444444 45888888888652 1 14577899999642 23456799999998
No 173
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=30.09 E-value=27 Score=28.66 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=23.0
Q ss_pred CcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 42 NVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 42 ~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
+.++||.++|+|++ ..|..+|+ .||.. |..|+
T Consensus 33 ~~lkgK~IaVIGyG-sQG~AqAl-NLRDS----Gv~V~ 64 (491)
T 3ulk_A 33 SYLQGKKVVIVGCG-AQGLNQGL-NMRDS----GLDIS 64 (491)
T ss_dssp GGGTTSEEEEESCS-HHHHHHHH-HHHHT----TCEEE
T ss_pred HHHcCCEEEEeCCC-hHhHHHHh-HHHhc----CCcEE
Confidence 68899999999998 34555654 45553 77665
No 174
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=29.43 E-value=60 Score=21.97 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=29.6
Q ss_pred HHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 9 FLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 9 i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+|++|++..--+ .++..-+.+++++.. .++|+.++..=
T Consensus 113 ~~~~d~vi~v~d~~~-~~~~~~~~~~~~l~~-----~~~p~i~v~nK 153 (223)
T 4dhe_A 113 RPQLCGMILMMDARR-PLTELDRRMIEWFAP-----TGKPIHSLLTK 153 (223)
T ss_dssp CTTEEEEEEEEETTS-CCCHHHHHHHHHHGG-----GCCCEEEEEEC
T ss_pred CcCcCEEEEEEeCCC-CCCHHHHHHHHHHHh-----cCCCEEEEEec
Confidence 344888999888655 567778888888853 56788777753
No 175
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=29.40 E-value=32 Score=22.90 Aligned_cols=47 Identities=6% Similarity=0.128 Sum_probs=28.9
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+ +..+.++..|+..-. ..-.++|+.+++.=
T Consensus 88 ~~~~~~~d~ii~v~d~~~---~~s~~~~~~~l~~i~~~~~~~~piilv~nK 135 (191)
T 2a5j_A 88 RSYYRGAAGALLVYDITR---RETFNHLTSWLEDARQHSSSNMVIMLIGNK 135 (191)
T ss_dssp HHHHTTCSEEEEEEETTC---HHHHHTHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred HHHhccCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 455778999999877655 445555555543100 12357888888763
No 176
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=29.07 E-value=91 Score=22.24 Aligned_cols=69 Identities=17% Similarity=0.111 Sum_probs=38.9
Q ss_pred ChhHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCc
Q 035766 1 MWLLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDL 76 (128)
Q Consensus 1 ~~~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~ 76 (128)
+|..++.++.. +.+|+..-+=+......+...|.++... +. |++.+---| | |...+...+...+..+..
T Consensus 28 ~~~d~~~~l~~-~riI~l~G~I~~~~a~~i~~~L~~l~~~-~~---k~I~l~INSPG--Gsv~a~~~I~~~i~~~~~ 97 (215)
T 2f6i_A 28 MKKDVKLFFFK-KRIIYLTDEINKKTADELISQLLYLDNI-NH---NDIKIYINSPG--GSINEGLAILDIFNYIKS 97 (215)
T ss_dssp SSHHHHHHHHT-TTEEEECSCBCHHHHHHHHHHHHHHHHH-CC---SCEEEEEEECC--BCHHHHHHHHHHHHHSSS
T ss_pred ccccHHHHHhC-ceEEEEccEECHHHHHHHHHHHHHHHhC-CC---CcEEEEEECCC--CCHHHHHHHHHHHHhcCC
Confidence 46677888775 5566655444544555666666666421 12 777666666 5 344444445445554444
No 177
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=29.00 E-value=81 Score=22.22 Aligned_cols=27 Identities=0% Similarity=-0.274 Sum_probs=18.6
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhc
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWAS 38 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~ 38 (128)
.+.+.++|.+|+++|.+ . ++.+++.+.
T Consensus 53 ~~~~~~~D~vi~~v~~~--~----~~~v~~~l~ 79 (262)
T 2rcy_A 53 EELARHCDIIVCAVKPD--I----AGSVLNNIK 79 (262)
T ss_dssp HHHHHHCSEEEECSCTT--T----HHHHHHHSG
T ss_pred HHHHhcCCEEEEEeCHH--H----HHHHHHHHH
Confidence 35678899999999965 2 455555443
No 178
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=28.69 E-value=34 Score=25.16 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=22.8
Q ss_pred cccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCCh
Q 035766 19 TDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGG 60 (128)
Q Consensus 19 tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg 60 (128)
+|....+.|+.+++.-.-. .+.+|.++|.|++|.-|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-----~~~~~~vlVtGatG~iG~ 39 (351)
T 3ruf_A 3 HHHHMDIYMSRYEEITQQL-----IFSPKTWLITGVAGFIGS 39 (351)
T ss_dssp -------CCHHHHHHHHHH-----HHSCCEEEEETTTSHHHH
T ss_pred ccchhhHHHHHHhhHHhhC-----CCCCCeEEEECCCcHHHH
Confidence 3556678899999987765 457899999987764443
No 179
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=28.58 E-value=35 Score=22.53 Aligned_cols=48 Identities=13% Similarity=0.131 Sum_probs=28.9
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
....+..+|++|++...-+ +..+.+.-+|+..-. ..-.++|+.+++.=
T Consensus 82 ~~~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~p~ilv~nK 130 (196)
T 3tkl_A 82 TSSYYRGAHGIIVVYDVTD---QESFNNVKQWLQEIDRYASENVNKLLVGNK 130 (196)
T ss_dssp HHHHHTTCSEEEEEEETTC---HHHHHTHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred HHHHHhhCCEEEEEEECcC---HHHHHHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 3456788999999876555 445555544542100 12247888888763
No 180
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=28.33 E-value=79 Score=23.70 Aligned_cols=29 Identities=14% Similarity=0.006 Sum_probs=20.9
Q ss_pred HhcCeEEEEcccCCCCCcHHHHHHHHhhc
Q 035766 10 LEFICFHLLTDLFSSFVQGPLKNAIDWAS 38 (128)
Q Consensus 10 ~~AD~ii~~tPeYn~~i~~~lKn~iD~l~ 38 (128)
..||++++++|-|+.-=...+...+.-+.
T Consensus 109 ~Gadavlv~~P~y~~~s~~~l~~~f~~va 137 (304)
T 3l21_A 109 EGAHGLLVVTPYYSKPPQRGLQAHFTAVA 137 (304)
T ss_dssp HTCSEEEEECCCSSCCCHHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHH
Confidence 35999999999999865555555555543
No 181
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=28.33 E-value=61 Score=25.78 Aligned_cols=42 Identities=2% Similarity=-0.103 Sum_probs=27.8
Q ss_pred hcCeEEEEcccCCCCCc------------HHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 11 EFICFHLLTDLFSSFVQ------------GPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 11 ~AD~ii~~tPeYn~~i~------------~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.|+.+|++|.- .-.+| +..++-.|.+.. ..+.||.|+|||++
T Consensus 202 ~ar~vVlatG~-~P~iP~~~~~~g~v~Hss~y~~~~~~~~~--~~~~gKrV~VVG~G 255 (501)
T 4b63_A 202 RTRKVVIAIGG-TAKMPSGLPQDPRIIHSSKYCTTLPALLK--DKSKPYNIAVLGSG 255 (501)
T ss_dssp EEEEEEECCCC-EECCCTTSCCCTTEEEGGGHHHHHHHHSC--CTTSCCEEEEECCS
T ss_pred EeCEEEECcCC-CCCCCCCCCCCcceeeccccccchhhccc--cccCCcEEEEECCc
Confidence 36778888762 22333 345666666644 57999999999955
No 182
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=28.14 E-value=82 Score=19.69 Aligned_cols=44 Identities=9% Similarity=0.061 Sum_probs=29.3
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+. .+..-+...+|+.. .++|+.+++.=
T Consensus 74 ~~~~~~~~~~i~v~d~~~~-~~~~~~~~~~~~~~-----~~~p~ilv~nK 117 (161)
T 2dyk_A 74 DRALEDAEVVLFAVDGRAE-LTQADYEVAEYLRR-----KGKPVILVATK 117 (161)
T ss_dssp HHHTTTCSEEEEEEESSSC-CCHHHHHHHHHHHH-----HTCCEEEEEEC
T ss_pred HHHHHhCCEEEEEEECCCc-ccHhHHHHHHHHHh-----cCCCEEEEEEC
Confidence 3456789999998877664 55555566666642 46777777753
No 183
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=27.93 E-value=75 Score=21.47 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=31.7
Q ss_pred HHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 30 LKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 30 lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
++.+.+.+.. ..||+.++|.+. ....+.+.++.+.+.+|+.++
T Consensus 24 v~~aa~~L~~-----AkrPvil~G~g~--~~~~a~~~l~~lae~~~iPV~ 66 (170)
T 3cf4_G 24 PEMAAKIISK-----AKRPLLMVGTLA--LDPELLDRVVKISKAANIPIA 66 (170)
T ss_dssp HHHHHHHHHH-----CSSEEEEECSTT--CCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHc-----CCCCEEEECCCc--cchhHHHHHHHHHHHhCCCEE
Confidence 7778888854 368999888542 234567788889999998876
No 184
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=27.89 E-value=22 Score=27.95 Aligned_cols=11 Identities=9% Similarity=-0.336 Sum_probs=9.9
Q ss_pred hcCeEEEEccc
Q 035766 11 EFICFHLLTDL 21 (128)
Q Consensus 11 ~AD~ii~~tPe 21 (128)
.|||+|++||-
T Consensus 246 ~aDGlIVSTPT 256 (365)
T 3pfn_A 246 QGDGVIVSTPT 256 (365)
T ss_dssp CSSEEEEECGG
T ss_pred ecCeEEEeCCc
Confidence 58999999996
No 185
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=27.82 E-value=29 Score=23.37 Aligned_cols=46 Identities=9% Similarity=-0.057 Sum_probs=26.1
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+..+|++|++...-+..--..++.+++.+.. ..-.++|+.+++.=
T Consensus 77 ~~~~~d~vilv~d~~~~~s~~~~~~~~~~i~~--~~~~~~piilv~nK 122 (206)
T 2bcg_Y 77 YYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR--YATSTVLKLLVGNK 122 (206)
T ss_dssp GGTTCSEEEEEEETTCHHHHHHHHHHHHHHHH--HSCTTCEEEEEEEC
T ss_pred hccCCCEEEEEEECcCHHHHHHHHHHHHHHHH--hcCCCCCEEEEEEC
Confidence 35789999998776553222233333433322 12246888888753
No 186
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=27.67 E-value=44 Score=28.45 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=34.5
Q ss_pred HHHHHhcCeEEEEcccCCCCC---------c----HHHHHHHHhhcCC-------------CCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFV---------Q----GPLKNAIDWASRP-------------PNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i---------~----~~lKn~iD~l~~~-------------~~~~~~Kp~~~v~~s 55 (128)
++..-.+.|+.++++-+-|.- . .-++.+|||+... ...|...+++++|.|
T Consensus 273 ~~~~la~~GYaVv~~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~S 348 (763)
T 1lns_A 273 LNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKS 348 (763)
T ss_dssp HHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEET
T ss_pred hHHHHHHCCCEEEEECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEEC
Confidence 445556778888888887631 1 2378999999731 124666789999988
No 187
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=27.24 E-value=1.1e+02 Score=22.75 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=36.8
Q ss_pred cCeEEEEcccCCCCCcHHHHHH---------------HHhhcCCC-----CcCCCCeEEEEeec--CCCCh----HHHHH
Q 035766 12 FICFHLLTDLFSSFVQGPLKNA---------------IDWASRPP-----NVWADKAAAIVSAA--GGSGG----ARAQY 65 (128)
Q Consensus 12 AD~ii~~tPeYn~~i~~~lKn~---------------iD~l~~~~-----~~~~~Kp~~~v~~s--g~~gg----~~a~~ 65 (128)
-|.+|+..|.|++.+...++.. +..+...+ ..+..++.+++... +..|. ..-..
T Consensus 128 ~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~ 207 (397)
T 2ord_A 128 KYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLE 207 (397)
T ss_dssp CCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTTCEECCHHHHH
T ss_pred CceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEecccCCCCcccCCHHHHH
Confidence 3568888999998887655432 11111111 23455666666654 44454 23345
Q ss_pred HHHHhhhhcCceee
Q 035766 66 HLRQIGVYLDLHFV 79 (128)
Q Consensus 66 ~L~~~l~~~g~~~~ 79 (128)
.|..++..-|+.++
T Consensus 208 ~l~~l~~~~~~~li 221 (397)
T 2ord_A 208 EARKLCDEYDALLV 221 (397)
T ss_dssp HHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCEEE
Confidence 56666555555444
No 188
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=27.06 E-value=48 Score=21.42 Aligned_cols=71 Identities=10% Similarity=0.044 Sum_probs=36.2
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCC-hHHHHHHHHHhhhhcCceee
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSG-GARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~g-g~~a~~~L~~~l~~~g~~~~ 79 (128)
...+..+|++|++...-+ +..+.+...|+..-. ..-.++|+.+++.= .-.. .....+.++..+...++.++
T Consensus 79 ~~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 152 (181)
T 2efe_B 79 PMYYRGAAAAIIVFDVTN---QASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFM 152 (181)
T ss_dssp HHHHTTCSEEEEEEETTC---HHHHHHHHHHHHHHHHHSCTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCEEE
T ss_pred HHHhccCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCcEEEEEECCcccccccCCHHHHHHHHHHcCCEEE
Confidence 345678999999876443 444555545543100 11247888888764 2211 11112344455555565433
No 189
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens}
Probab=26.78 E-value=40 Score=22.57 Aligned_cols=44 Identities=11% Similarity=0.134 Sum_probs=21.4
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEee
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSA 54 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~ 54 (128)
.+..+|++|++...-+ +..+.++-.|+..-. ..-.++|+.+++.
T Consensus 102 ~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~p~ilv~n 146 (199)
T 3l0i_B 102 YYRGAHGIIVVYDVTD---QESFNNVKQWLQEIDRYASENVNKLLVGN 146 (199)
T ss_dssp --CCCSEEEECC-CCC---SHHHHHHHHHHHHHHSCC-CCSEEEEC-C
T ss_pred HhhcCCEEEEEEECCC---HHHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 3567888888755444 445555555542100 1223677777664
No 190
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=26.69 E-value=1.4e+02 Score=21.35 Aligned_cols=15 Identities=33% Similarity=0.457 Sum_probs=10.4
Q ss_pred CcCCCCeEEEEeecC
Q 035766 42 NVWADKAAAIVSAAG 56 (128)
Q Consensus 42 ~~~~~Kp~~~v~~sg 56 (128)
..+.||.+.|.|++|
T Consensus 24 ~~l~gk~vlVTGas~ 38 (266)
T 3uxy_A 24 QGFEGKVALVTGAAG 38 (266)
T ss_dssp --CTTCEEEESSTTS
T ss_pred hCCCCCEEEEeCCCc
Confidence 468899988888664
No 191
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=26.67 E-value=1.5e+02 Score=19.98 Aligned_cols=48 Identities=2% Similarity=0.101 Sum_probs=31.2
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC-Cc-------------HHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF-VQ-------------GPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~-i~-------------~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|..+.+.+.+. ++.+.+|.|-+. -+ ..+..++|++.. . .+++.++|.|
T Consensus 56 ~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~---~--~~~i~l~G~S 117 (270)
T 3rm3_A 56 MRPLAEAYAKA-GYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQ---R--CQTIFVTGLS 117 (270)
T ss_dssp THHHHHHHHHT-TCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHT---T--CSEEEEEEET
T ss_pred HHHHHHHHHHC-CCEEEEeCCCCCCCCccccccCCHHHHHHHHHHHHHHHHh---h--CCcEEEEEEc
Confidence 66677777766 556666666421 11 236667777753 2 7899999998
No 192
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=26.66 E-value=62 Score=26.39 Aligned_cols=64 Identities=13% Similarity=-0.083 Sum_probs=37.1
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcC------------CCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhc
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASR------------PPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYL 74 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~------------~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~ 74 (128)
+.+.+...+++-+|.+|.++. |..++.+.. ++..+.||.++|+|.+ .-| ...... +..+
T Consensus 229 ~a~~~~Gilv~n~~~vn~sVa---e~l~r~~~~~~~~l~~gw~~~~g~~L~GktVgIIG~G-~IG-~~vA~~----l~~~ 299 (494)
T 3d64_A 229 YQMEKDGRLPFPAFNVNDSVT---KSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYG-DVG-KGCAQS----LRGL 299 (494)
T ss_dssp HHHHHTTCCCSCEEECTTSHH---HHHHHHHHHHHTTHHHHHHHHHCCCCTTCEEEEECCS-HHH-HHHHHH----HHTT
T ss_pred HHHHHCCCEEEECCCccHHHH---HHHHhhhHhhhhhhhhhhhhccccccCCCEEEEEccC-HHH-HHHHHH----HHHC
Confidence 345556667788899988433 443333211 1146899999999976 222 222223 3456
Q ss_pred Cceee
Q 035766 75 DLHFV 79 (128)
Q Consensus 75 g~~~~ 79 (128)
|+.|+
T Consensus 300 G~~V~ 304 (494)
T 3d64_A 300 GATVW 304 (494)
T ss_dssp TCEEE
T ss_pred CCEEE
Confidence 77765
No 193
>3arc_X Photosystem II PSBX protein; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3prq_X* 3prr_X* 3kzi_X* 3a0b_X* 3a0h_X*
Probab=26.59 E-value=33 Score=18.31 Aligned_cols=12 Identities=17% Similarity=-0.020 Sum_probs=8.3
Q ss_pred CcHHHHHHHHhh
Q 035766 26 VQGPLKNAIDWA 37 (128)
Q Consensus 26 i~~~lKn~iD~l 37 (128)
++|.|||+|-=+
T Consensus 2 mTpSL~nFl~Sl 13 (39)
T 3arc_X 2 ITPSLKGFFIGL 13 (39)
T ss_dssp CCHHHHHHHHHH
T ss_pred cChhHHHHHHHH
Confidence 678888886544
No 194
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=26.55 E-value=35 Score=22.86 Aligned_cols=70 Identities=16% Similarity=0.295 Sum_probs=37.1
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCC-hHHHHHHHHHhhhhcCceee
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSG-GARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~g-g~~a~~~L~~~l~~~g~~~~ 79 (128)
..+..+|++|++...-+ +..+.+...|+..-. ....++|+.+++.= .-.. ........+.+...+|+.++
T Consensus 76 ~~~~~~d~ii~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 148 (203)
T 1zbd_A 76 AYYRGAMGFILMYDITN---EESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFF 148 (203)
T ss_dssp TTGGGCSEEEEEEETTC---HHHHHHHHHHHHHHHHHSCSSCEEEEEEECTTCTTSCCSCHHHHHHHHHHHTCEEE
T ss_pred HhhcCCCEEEEEEECcC---HHHHHHHHHHHHHHHHhcCCCCCEEEEEECcccCcccccCHHHHHHHHHHCCCeEE
Confidence 34578999999976544 445555555553100 12357898888764 2111 11112344455555565433
No 195
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=26.54 E-value=1.3e+02 Score=21.21 Aligned_cols=68 Identities=16% Similarity=0.066 Sum_probs=37.2
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcC
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLD 75 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g 75 (128)
|..+++++.. +.+|+..-+-+......+...|.++.. .=..|++.+.--| | |...+...+...+..+.
T Consensus 17 ~~~~~~~l~~-~rii~l~G~I~~~~a~~i~~~L~~~~~---~~~~k~I~l~InSPG--G~v~a~~~I~~~i~~~~ 85 (208)
T 2cby_A 17 TDSVYERLLS-ERIIFLGSEVNDEIANRLCAQILLLAA---EDASKDISLYINSPG--GSISAGMAIYDTMVLAP 85 (208)
T ss_dssp HHHHHHHHHT-TTEEEECSCBCHHHHHHHHHHHHHHHH---HCSSSCEEEEEEECC--BCHHHHHHHHHHHHHCS
T ss_pred hhhHHHHhhc-CcEEEEcCEECHHHHHHHHHHHHHHHh---CCCCCCEEEEEECCC--CCHHHHHHHHHHHHhcC
Confidence 5566777765 556666555555555666777766642 1235666666556 4 33444444444444444
No 196
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=26.53 E-value=1.7e+02 Score=20.89 Aligned_cols=12 Identities=8% Similarity=0.011 Sum_probs=9.5
Q ss_pred HHHHHhcCeEEE
Q 035766 6 YNTFLEFICFHL 17 (128)
Q Consensus 6 ~~~i~~AD~ii~ 17 (128)
.+.+++||.|+.
T Consensus 26 ~~~L~~aDvI~~ 37 (242)
T 1wyz_A 26 TEIIRGIRHFIV 37 (242)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHHhCCEEEE
Confidence 567888998876
No 197
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=26.21 E-value=77 Score=21.26 Aligned_cols=43 Identities=12% Similarity=0.040 Sum_probs=26.9
Q ss_pred HHhcCeEEEEcccCCCCCcHHHHHHHHhhc---CCCCcCCCCeEEEEeec
Q 035766 9 FLEFICFHLLTDLFSSFVQGPLKNAIDWAS---RPPNVWADKAAAIVSAA 55 (128)
Q Consensus 9 i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~---~~~~~~~~Kp~~~v~~s 55 (128)
+..+|++|++....+. ..+.+...|+. +. ....++|+.+++.=
T Consensus 90 ~~~~d~~i~v~D~~~~---~s~~~~~~~~~~~~~~-~~~~~~piilv~NK 135 (198)
T 1f6b_A 90 LPAINGIVFLVDCADH---ERLLESKEELDSLMTD-ETIANVPILILGNK 135 (198)
T ss_dssp GGGCSEEEEEEETTCG---GGHHHHHHHHHHHHTC-GGGTTSCEEEEEEC
T ss_pred HhcCCEEEEEEECCCH---HHHHHHHHHHHHHHhC-cccCCCcEEEEEEC
Confidence 4689999999877664 23444444442 21 23468898888763
No 198
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=25.97 E-value=69 Score=24.99 Aligned_cols=45 Identities=13% Similarity=0.069 Sum_probs=31.9
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEee
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSA 54 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~ 54 (128)
+....+.+||++|++...-+ +++..-....+|+.+ .+||+.+++.
T Consensus 74 ~~~~~~~~ad~il~V~D~~~-~~~~~d~~i~~~l~~-----~~~p~ilv~N 118 (439)
T 1mky_A 74 VTLNMIREADLVLFVVDGKR-GITKEDESLADFLRK-----STVDTILVAN 118 (439)
T ss_dssp HHHHHHTTCSEEEEEEETTT-CCCHHHHHHHHHHHH-----HTCCEEEEEE
T ss_pred HHHHHHHhCCEEEEEEECCC-CCCHHHHHHHHHHHH-----cCCCEEEEEe
Confidence 45667899999999987654 456665667777742 3688777764
No 199
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=25.70 E-value=1.3e+02 Score=19.88 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=32.1
Q ss_pred ChhHHHHHHHhc--CeEEEEcccCC---------CCCcHHHHHHHHhhcCCCCcCC-CCeEEEEeecCCCChHHHHH
Q 035766 1 MWLLTYNTFLEF--ICFHLLTDLFS---------SFVQGPLKNAIDWASRPPNVWA-DKAAAIVSAAGGSGGARAQY 65 (128)
Q Consensus 1 ~~~~~~~~i~~A--D~ii~~tPeYn---------~~i~~~lKn~iD~l~~~~~~~~-~Kp~~~v~~sg~~gg~~a~~ 65 (128)
+|..+.+.+.+. ..+.+--|-|- .++....+.+.+.+. .+. ++++.++|.| .||..+..
T Consensus 19 ~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~----~l~~~~~~~lvGhS--~Gg~~a~~ 89 (258)
T 3dqz_A 19 IWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLK----SLPENEEVILVGFS--FGGINIAL 89 (258)
T ss_dssp GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHH----TSCTTCCEEEEEET--THHHHHHH
T ss_pred cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHH----HhcccCceEEEEeC--hhHHHHHH
Confidence 377777888765 33333333222 344444455555553 233 4899999988 33544443
No 200
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=25.57 E-value=27 Score=22.84 Aligned_cols=47 Identities=19% Similarity=0.266 Sum_probs=28.5
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC--CcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP--NVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~--~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+ +..+.++..|+..-. ....++|+.+++.=
T Consensus 88 ~~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~~piilv~nK 136 (195)
T 3bc1_A 88 TAFFRDAMGFLLLFDLTN---EQSFLNVRNWISQLQMHAYSENPDIVLCGNK 136 (195)
T ss_dssp HHTTTTCSEEEEEEETTC---HHHHHTHHHHHHHHHHHSSSSSCCEEEEEEC
T ss_pred HHHHcCCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCCCEEEEEEC
Confidence 345678999999876544 455555555543100 12257888888763
No 201
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=25.51 E-value=80 Score=20.55 Aligned_cols=44 Identities=9% Similarity=-0.042 Sum_probs=26.9
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhc---CCCCcCCCCeEEEEeec
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWAS---RPPNVWADKAAAIVSAA 55 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~---~~~~~~~~Kp~~~v~~s 55 (128)
.+..+|++|++...-+. ..+.+...|+. +. ....++|+.+++.=
T Consensus 82 ~~~~~d~ii~v~d~~~~---~s~~~~~~~~~~~~~~-~~~~~~piilv~nK 128 (186)
T 1ksh_A 82 YFESTDGLIWVVDSADR---QRMQDCQRELQSLLVE-ERLAGATLLIFANK 128 (186)
T ss_dssp GCTTCSEEEEEEETTCG---GGHHHHHHHHHHHHTC-GGGTTCEEEEEEEC
T ss_pred HhcCCCEEEEEEECcCH---HHHHHHHHHHHHHHhC-hhcCCCcEEEEEeC
Confidence 35689999998775543 33444444432 21 23467899888864
No 202
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=25.48 E-value=29 Score=24.95 Aligned_cols=54 Identities=6% Similarity=0.029 Sum_probs=34.2
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----CcHH---HHHHHHhhcCCCCc--CCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----VQGP---LKNAIDWASRPPNV--WADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----i~~~---lKn~iD~l~~~~~~--~~~Kp~~~v~~s 55 (128)
|..+.+.+.+.-++.+++|.|-+. .|.. +..+++|+...... ...+++.++|.|
T Consensus 95 ~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S 157 (313)
T 2wir_A 95 HDHVCRRLANLSGAVVVSVDYRLAPEHKFPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDS 157 (313)
T ss_dssp GHHHHHHHHHHHCCEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEET
T ss_pred HHHHHHHHHHHcCCEEEEeecCCCCCCCCCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeC
Confidence 566677777666788888888543 3444 44567777531111 234589999988
No 203
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=25.41 E-value=75 Score=20.65 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=30.3
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
+++....+|+++++..--+ ..+......++|+.. . ++|+.+++.=
T Consensus 98 ~~~~~~~~~~vi~v~d~~~-~~~~~~~~~~~~~~~----~-~~p~i~v~nK 142 (195)
T 3pqc_A 98 YFKNRWSLQMVFLLVDGRI-PPQDSDLMMVEWMKS----L-NIPFTIVLTK 142 (195)
T ss_dssp HHHHCTTEEEEEEEEETTS-CCCHHHHHHHHHHHH----T-TCCEEEEEEC
T ss_pred HHhcCcCceEEEEEecCCC-CCCHHHHHHHHHHHH----c-CCCEEEEEEC
Confidence 3444445699998887543 556677788888853 2 6888888763
No 204
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=25.33 E-value=87 Score=20.89 Aligned_cols=55 Identities=11% Similarity=0.001 Sum_probs=28.1
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC---C-------CcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHH
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS---F-------VQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQY 65 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~---~-------i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~ 65 (128)
|..+.+.+. .++-+.++.+-| + +....+.+.+.+. .+. +++.++|.| .||..+..
T Consensus 39 ~~~~~~~l~--~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~~~~~~----~l~-~~~~l~G~S--~Gg~ia~~ 103 (262)
T 3r0v_A 39 GAPLAERLA--PHFTVICYDRRGRGDSGDTPPYAVEREIEDLAAIID----AAG-GAAFVFGMS--SGAGLSLL 103 (262)
T ss_dssp GHHHHHHHT--TTSEEEEECCTTSTTCCCCSSCCHHHHHHHHHHHHH----HTT-SCEEEEEET--HHHHHHHH
T ss_pred HHHHHHHHh--cCcEEEEEecCCCcCCCCCCCCCHHHHHHHHHHHHH----hcC-CCeEEEEEc--HHHHHHHH
Confidence 666666665 455555555522 1 2222333333332 334 788899988 23544443
No 205
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=25.33 E-value=41 Score=22.68 Aligned_cols=46 Identities=9% Similarity=0.097 Sum_probs=28.7
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
..+..+|++|++...-+ +..+.+...|+.... ..-.++|+.+++.=
T Consensus 93 ~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~~~~~~~~~~piilv~nK 139 (200)
T 2o52_A 93 SYYRGAAGALLVYDITS---RETYNSLAAWLTDARTLASPNIVVILCGNK 139 (200)
T ss_dssp HHHTTCSEEEEEEETTC---HHHHHTHHHHHHHHHHHTCTTCEEEEEEEC
T ss_pred HHhccCCEEEEEEECcC---HHHHHHHHHHHHHHHHhcCCCCcEEEEEEC
Confidence 45778999999976655 445555555553100 11257888888763
No 206
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=25.29 E-value=30 Score=23.72 Aligned_cols=50 Identities=10% Similarity=-0.041 Sum_probs=26.9
Q ss_pred HHHHHhcCeEEEEcccCCCCC-----------cH---HHHHHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 6 YNTFLEFICFHLLTDLFSSFV-----------QG---PLKNAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i-----------~~---~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
.+.+.+.-+++++.|.|.++- .. .+..+++..... .....+++.++|.| |
T Consensus 63 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~i~l~G~S~G 127 (263)
T 2uz0_A 63 VERLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPN-MTSKREKTFIAGLSMG 127 (263)
T ss_dssp HHHHTTTCCCEEEECCCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTT-BCCCGGGEEEEEETHH
T ss_pred HHHHHhcCCeEEEEECCCCCccccCCCcccHHHHHHHHHHHHHHHHhcc-ccCCCCceEEEEEChH
Confidence 455555556666799987651 11 223333333210 01134779999998 5
No 207
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=25.04 E-value=1.1e+02 Score=23.15 Aligned_cols=67 Identities=18% Similarity=0.117 Sum_probs=38.4
Q ss_pred CeEEEEcccCCCCCcHHHHHH---------------HHhhcCCC-----CcCCCCeEEEEeec-CCCChH-----HHHHH
Q 035766 13 ICFHLLTDLFSSFVQGPLKNA---------------IDWASRPP-----NVWADKAAAIVSAA-GGSGGA-----RAQYH 66 (128)
Q Consensus 13 D~ii~~tPeYn~~i~~~lKn~---------------iD~l~~~~-----~~~~~Kp~~~v~~s-g~~gg~-----~a~~~ 66 (128)
|.||+..|.|++.....+... +.++...+ ..+..++.+++... .+.||. .-...
T Consensus 147 ~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~ 226 (420)
T 2pb2_A 147 TKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKG 226 (420)
T ss_dssp CEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHH
T ss_pred CEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHH
Confidence 578889999999887665431 11111111 24456777777655 334442 34566
Q ss_pred HHHhhhhcCceee
Q 035766 67 LRQIGVYLDLHFV 79 (128)
Q Consensus 67 L~~~l~~~g~~~~ 79 (128)
++.++..-|+.++
T Consensus 227 l~~l~~~~gi~lI 239 (420)
T 2pb2_A 227 LRDLCDEHQALLV 239 (420)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHcCCEEE
Confidence 7777666666555
No 208
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=24.97 E-value=1.4e+02 Score=22.76 Aligned_cols=26 Identities=8% Similarity=-0.089 Sum_probs=20.2
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhc
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWAS 38 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~ 38 (128)
+.+..||.||+++|.+. ++.+++.+.
T Consensus 78 ~a~~~aD~Vilav~~~~------~~~v~~~l~ 103 (404)
T 3c7a_A 78 IAISGADVVILTVPAFA------HEGYFQAMA 103 (404)
T ss_dssp HHHTTCSEEEECSCGGG------HHHHHHHHT
T ss_pred HHhCCCCEEEEeCchHH------HHHHHHHHH
Confidence 45778999999999985 466666664
No 209
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=24.82 E-value=1.6e+02 Score=22.74 Aligned_cols=25 Identities=4% Similarity=0.048 Sum_probs=18.7
Q ss_pred HHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 29 PLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 29 ~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.++.++..... ..+.||.++|.|.+
T Consensus 160 ~~~~~~~~~G~--~~L~GktV~I~G~G 184 (355)
T 1c1d_A 160 AMKATVAHRGL--GSLDGLTVLVQGLG 184 (355)
T ss_dssp HHHHHHHHTTC--CCSTTCEEEEECCS
T ss_pred HHHHHHHhcCC--CCCCCCEEEEECcC
Confidence 56777777642 37999999999865
No 210
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=24.81 E-value=35 Score=22.31 Aligned_cols=44 Identities=16% Similarity=0.264 Sum_probs=27.1
Q ss_pred HHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 9 FLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 9 i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
+..+|++|++...-+ +..+.++.+|+..-. ..-.++|+.+++.=
T Consensus 78 ~~~~d~~i~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~nK 122 (183)
T 2fu5_C 78 YRGAMGIMLVYDITN---EKSFDNIRNWIRNIEEHASADVEKMILGNK 122 (183)
T ss_dssp TTTCSEEEEEEETTC---HHHHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred HhcCCEEEEEEECcC---HHHHHHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 567999999876554 455666655653100 11246788888763
No 211
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=24.81 E-value=1.6e+02 Score=19.61 Aligned_cols=60 Identities=8% Similarity=0.008 Sum_probs=30.5
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC---CcH--------HHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHH
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF---VQG--------PLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQY 65 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~---i~~--------~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~ 65 (128)
|..+.+.+.+ ++-+.++.+-|. -.. .+....+.+...-..+..+++.++|.| .||..+..
T Consensus 44 ~~~~~~~l~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S--~Gg~~a~~ 114 (282)
T 3qvm_A 44 WRFMLPELEK--QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHS--VSSIIAGI 114 (282)
T ss_dssp GTTTHHHHHT--TSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTCCSEEEEEET--HHHHHHHH
T ss_pred HHHHHHHHhc--CceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEEEec--ccHHHHHH
Confidence 6666777765 556666665421 111 233333333210023455889999988 23444443
No 212
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=24.71 E-value=58 Score=22.18 Aligned_cols=26 Identities=4% Similarity=-0.346 Sum_probs=18.5
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhh
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWA 37 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l 37 (128)
.+.++++|.+|+++|.+ .++..++.+
T Consensus 59 ~~~~~~~D~Vi~~~~~~------~~~~~~~~l 84 (212)
T 1jay_A 59 EDAAEACDIAVLTIPWE------HAIDTARDL 84 (212)
T ss_dssp HHHHHHCSEEEECSCHH------HHHHHHHHT
T ss_pred HHHHhcCCEEEEeCChh------hHHHHHHHH
Confidence 35678899999999854 355555544
No 213
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=24.66 E-value=1.2e+02 Score=22.42 Aligned_cols=46 Identities=9% Similarity=0.068 Sum_probs=32.9
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEee
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSA 54 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~ 54 (128)
.....+..+|+++++..--++.-+.....++..+.. .++|+.++..
T Consensus 85 ~~~~~l~~aD~il~VvD~~~~~~~~~~~~~~~~l~~-----~~~pvilV~N 130 (308)
T 3iev_A 85 IAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKP-----LNKPVIVVIN 130 (308)
T ss_dssp HHHHHHHHCSEEEEEEETTTBSCHHHHHHHHHHTGG-----GCCCEEEEEE
T ss_pred HHHHHhhcCCEEEEEEeCCCCCCchhHHHHHHHHHh-----cCCCEEEEEE
Confidence 345667899999999988776556666555777752 3677777765
No 214
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=24.62 E-value=1.7e+02 Score=19.84 Aligned_cols=51 Identities=18% Similarity=0.186 Sum_probs=32.4
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC------Cc------HHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF------VQ------GPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~------i~------~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
|..+.+.+.+. ++.+.+|.|-+. .+ ..+..++||+.. .....+++.++|.|
T Consensus 68 ~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~~~~~~~~~~d~~~~i~~l~~--~~~~~~~i~l~G~S 130 (249)
T 2i3d_A 68 VYQLFYLFQKR-GFTTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQS--LHPDSKSCWVAGYS 130 (249)
T ss_dssp HHHHHHHHHHT-TCEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHHH--HCTTCCCEEEEEET
T ss_pred HHHHHHHHHHC-CCEEEEECCCCCCCCCCCCCCccchHHHHHHHHHHHHH--hCCCCCeEEEEEEC
Confidence 45566666654 566777777531 11 457778888864 22344589999998
No 215
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=24.62 E-value=93 Score=22.06 Aligned_cols=25 Identities=8% Similarity=0.026 Sum_probs=18.0
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHH
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKN 32 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn 32 (128)
.+.+.++|.+|+++|.+. +...++.
T Consensus 58 ~~~~~~~d~vi~~v~~~~--~~~v~~~ 82 (291)
T 1ks9_A 58 PDFLATSDLLLVTLKAWQ--VSDAVKS 82 (291)
T ss_dssp HHHHHTCSEEEECSCGGG--HHHHHHH
T ss_pred ccccCCCCEEEEEecHHh--HHHHHHH
Confidence 356788999999999985 3444443
No 216
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=24.37 E-value=80 Score=20.69 Aligned_cols=14 Identities=14% Similarity=0.290 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHH
Q 035766 104 EESKEKLKAVLLAL 117 (128)
Q Consensus 104 ~~~~~~l~~~~~~l 117 (128)
++..+.+++-+..+
T Consensus 175 ~~~~~~l~~~l~~l 188 (193)
T 2ged_A 175 SKIKDALESEIQKV 188 (193)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34455555444433
No 217
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=24.34 E-value=25 Score=23.06 Aligned_cols=46 Identities=9% Similarity=0.098 Sum_probs=27.7
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
..+..+|++|++...-+ +..+.+.-.|+.... ..-.++|+.+++.=
T Consensus 78 ~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~~~~~~~~~~piilv~nK 124 (186)
T 2bme_A 78 SYYRGAAGALLVYDITS---RETYNALTNWLTDARMLASQNIVIILCGNK 124 (186)
T ss_dssp TTSTTCSEEEEEEETTC---HHHHHTHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred HHHhcCCEEEEEEECcC---HHHHHHHHHHHHHHHHhcCCCCcEEEEEEC
Confidence 34578999999977655 445555444542100 11257888888764
No 218
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=24.31 E-value=30 Score=22.96 Aligned_cols=69 Identities=17% Similarity=0.290 Sum_probs=35.7
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCCh-HHHHHHHHHhhhhcCceee
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSGG-ARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~gg-~~a~~~L~~~l~~~g~~~~ 79 (128)
.+..+|++|++...-+ +..+.+...|+..-. ....++|+.+++.= .-... .......+.+...+|..++
T Consensus 91 ~~~~~d~ii~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 162 (189)
T 2gf9_A 91 YYRGAMGFLLMYDIAN---QESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFF 162 (189)
T ss_dssp GGTTCSEEEEEEETTC---HHHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred hccCCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCCEEEEEECcccccccCCCHHHHHHHHHHcCCeEE
Confidence 4568999999876544 444555444542100 12357898888863 21110 0112344555555565433
No 219
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=23.85 E-value=26 Score=26.43 Aligned_cols=18 Identities=17% Similarity=0.086 Sum_probs=13.8
Q ss_pred hcCeEEEEcc----cCCCCCcH
Q 035766 11 EFICFHLLTD----LFSSFVQG 28 (128)
Q Consensus 11 ~AD~ii~~tP----eYn~~i~~ 28 (128)
.+||+|++|| -||.|.-|
T Consensus 172 ~~DGlIVsTPTGSTAY~lSAGG 193 (278)
T 1z0s_A 172 RCDGFIVATQIGSTGYAFSAGG 193 (278)
T ss_dssp EESEEEEEESGGGGTHHHHTTC
T ss_pred ecCeEEEecCCchhHHHhhCCC
Confidence 5899999999 57766433
No 220
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=23.76 E-value=34 Score=24.79 Aligned_cols=54 Identities=4% Similarity=-0.008 Sum_probs=33.5
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC----CcHH---HHHHHHhhcCCCCcC--CCCeEEEEeec
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF----VQGP---LKNAIDWASRPPNVW--ADKAAAIVSAA 55 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~----i~~~---lKn~iD~l~~~~~~~--~~Kp~~~v~~s 55 (128)
|..+.+.+....++.+++|.|-+. .|.. ...+++|+......+ ..+++.++|.|
T Consensus 98 ~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S 160 (311)
T 1jji_A 98 HDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDS 160 (311)
T ss_dssp GHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEET
T ss_pred hHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeC
Confidence 455666777556788888888653 3444 455667775311112 23478999988
No 221
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=23.67 E-value=1.5e+02 Score=21.64 Aligned_cols=48 Identities=4% Similarity=-0.199 Sum_probs=28.7
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHH----Hhh---cCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAI----DWA---SRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~i----D~l---~~~~~~~~~Kp~~~v~~s 55 (128)
.+...+....+..+|.++ ++ +..++.- .|. ......+.+|.++++|.+
T Consensus 112 ~~~~~~~gi~v~~~~~~~-~v-~~~r~~~~~~g~~~~~~~~~~~~l~g~~v~IiG~G 166 (300)
T 2rir_A 112 ENIAAQAKRKLVKLFERD-DI-AIYNSIPTVEGTIMLAIQHTDYTIHGSQVAVLGLG 166 (300)
T ss_dssp HHHHHHTTCCEEEGGGSH-HH-HHHHHHHHHHHHHHHHHHTCSSCSTTSEEEEECCS
T ss_pred HHHHHHCCCEEEeecCCC-ce-EEEcCccHHHHHHHHHHHhcCCCCCCCEEEEEccc
Confidence 456677777888899886 22 1222210 111 111257899999999975
No 222
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=23.59 E-value=96 Score=20.23 Aligned_cols=45 Identities=7% Similarity=-0.142 Sum_probs=26.4
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEee
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSA 54 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~ 54 (128)
..+..||++|++....+..-.. .+.+++.+.. ..-.++|+.+++.
T Consensus 79 ~~~~~ad~~i~v~D~~~~~s~~-~~~~~~~~~~--~~~~~~p~ilv~N 123 (172)
T 2gj8_A 79 QEIEQADRVLFMVDGTTTDAVD-PAEIWPEFIA--RLPAKLPITVVRN 123 (172)
T ss_dssp HHHHTCSEEEEEEETTTCCCCS-HHHHCHHHHH--HSCTTCCEEEEEE
T ss_pred HHHHhCCEEEEEEECCCCCCHH-HHHHHHHHHH--hcccCCCEEEEEE
Confidence 4578999999987766543222 3344444432 1224678777764
No 223
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=23.51 E-value=1e+02 Score=22.79 Aligned_cols=26 Identities=4% Similarity=-0.153 Sum_probs=19.7
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhc
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWAS 38 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~ 38 (128)
+.+.++|.||+++|.+ .++.+++.+.
T Consensus 86 ~~~~~aD~Vilav~~~------~~~~v~~~i~ 111 (354)
T 1x0v_A 86 QAAEDADILIFVVPHQ------FIGKICDQLK 111 (354)
T ss_dssp HHHTTCSEEEECCCGG------GHHHHHHHHT
T ss_pred HHHcCCCEEEEeCCHH------HHHHHHHHHH
Confidence 4577899999999975 4666666664
No 224
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=23.51 E-value=75 Score=21.71 Aligned_cols=22 Identities=9% Similarity=-0.020 Sum_probs=13.9
Q ss_pred cCCCCeEEEEeecCCCChHHHHHH
Q 035766 43 VWADKAAAIVSAAGGSGGARAQYH 66 (128)
Q Consensus 43 ~~~~Kp~~~v~~sg~~gg~~a~~~ 66 (128)
.+..+++.++|.| .||..+...
T Consensus 100 ~l~~~~~~lvGhS--~Gg~ia~~~ 121 (306)
T 3r40_A 100 QLGHVHFALAGHN--RGARVSYRL 121 (306)
T ss_dssp HTTCSSEEEEEET--HHHHHHHHH
T ss_pred HhCCCCEEEEEec--chHHHHHHH
Confidence 3455789999988 235544433
No 225
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=23.47 E-value=77 Score=23.07 Aligned_cols=51 Identities=10% Similarity=0.085 Sum_probs=28.8
Q ss_pred ChhHHHHHHHhcCeEEEEcccCC-C-CCc-------------HHHHHHHHhhcCCCCcCCCCeEEEEeec-C
Q 035766 1 MWLLTYNTFLEFICFHLLTDLFS-S-FVQ-------------GPLKNAIDWASRPPNVWADKAAAIVSAA-G 56 (128)
Q Consensus 1 ~~~~~~~~i~~AD~ii~~tPeYn-~-~i~-------------~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g 56 (128)
+|..+.+.+.+. ++-+.+|.|- + +-| .-+..++|++. .+..+++.++|.| |
T Consensus 50 ~~~~~~~~L~~~-G~~Vi~~D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~----~~~~~~~~lvGhSmG 116 (305)
T 1tht_A 50 HFAGLAEYLSTN-GFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQ----TKGTQNIGLIAASLS 116 (305)
T ss_dssp GGHHHHHHHHTT-TCCEEEECCCBCC--------CCCHHHHHHHHHHHHHHHH----HTTCCCEEEEEETHH
T ss_pred HHHHHHHHHHHC-CCEEEEeeCCCCCCCCCCcccceehHHHHHHHHHHHHHHH----hCCCCceEEEEECHH
Confidence 377777777654 3444444442 1 222 12566777774 2345788899988 5
No 226
>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_A*
Probab=23.36 E-value=47 Score=24.58 Aligned_cols=49 Identities=10% Similarity=-0.042 Sum_probs=31.3
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
..+..+|++|++...-+..-...++.+.+|+........++|+.+++.=
T Consensus 76 ~~~~~ad~vi~V~D~t~~~s~~~l~~~~~~l~~l~~~~~~~piilv~NK 124 (307)
T 3r7w_A 76 HIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHK 124 (307)
T ss_dssp HHHTTCSEEEEEEETTCSCHHHHHHHHHHHHHHHHHHCTTCEEEEEEEC
T ss_pred HHhccCCEEEEEEECCChhhHHHHHHHHHHHHHHHHhCCCCeEEEEEec
Confidence 3457899999998776655445555556666421012347888888763
No 227
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=23.31 E-value=1.1e+02 Score=24.07 Aligned_cols=67 Identities=13% Similarity=-0.008 Sum_probs=36.7
Q ss_pred HHHHhcCeEEEEcccCCCCCcH--HHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 7 NTFLEFICFHLLTDLFSSFVQG--PLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~--~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
+...+....|.-+|.||..--+ .+-..+....+.+.++.||.++|+|.+ .-|. ..... +..+|+.++
T Consensus 78 ~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG-~IG~-~vA~~----l~a~G~~V~ 146 (381)
T 3oet_A 78 AWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVG-NVGS-RLQTR----LEALGIRTL 146 (381)
T ss_dssp HHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCS-HHHH-HHHHH----HHHTTCEEE
T ss_pred HHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeEC-HHHH-HHHHH----HHHCCCEEE
Confidence 3455667778888988753221 112222222222258899999999987 2222 22222 345577665
No 228
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=23.30 E-value=1.6e+02 Score=20.08 Aligned_cols=63 Identities=11% Similarity=0.076 Sum_probs=29.7
Q ss_pred ChhHHHHHHHhcCeEEEEcccCCC---CC-----cHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHH
Q 035766 1 MWLLTYNTFLEFICFHLLTDLFSS---FV-----QGPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYH 66 (128)
Q Consensus 1 ~~~~~~~~i~~AD~ii~~tPeYn~---~i-----~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~ 66 (128)
+|..+.+.+.+. ++-+.++.|-| +- ...+....+.+...-..+..+++.++|.| .||..+...
T Consensus 61 ~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S--~Gg~~a~~~ 131 (315)
T 4f0j_A 61 TWERTIDVLADA-GYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERLGVARASVIGHS--MGGMLATRY 131 (315)
T ss_dssp GGHHHHHHHHHT-TCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHTTCSCEEEEEET--HHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCceEEEEec--HHHHHHHHH
Confidence 367777777765 34444444432 11 11122222222100024555789999988 234444433
No 229
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=23.09 E-value=98 Score=22.59 Aligned_cols=26 Identities=4% Similarity=-0.206 Sum_probs=19.2
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHHHHHHHhhc
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPLKNAIDWAS 38 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~ 38 (128)
+.+.++|.+|+++|.+ .++.+++.+.
T Consensus 67 ~~~~~~D~vi~~v~~~------~~~~v~~~i~ 92 (335)
T 1txg_A 67 KCLENAEVVLLGVSTD------GVLPVMSRIL 92 (335)
T ss_dssp HHHTTCSEEEECSCGG------GHHHHHHHHT
T ss_pred HHHhcCCEEEEcCChH------HHHHHHHHHh
Confidence 4578899999999987 3555555553
No 230
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=22.97 E-value=63 Score=21.01 Aligned_cols=71 Identities=11% Similarity=0.155 Sum_probs=37.2
Q ss_pred HHHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec-CCCChHHHHHHHHHhhhhcCceee
Q 035766 5 TYNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA-GGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s-g~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
....+..+|++|++...-+ +..+.+...|+..- ....++|+.+++.= ...........++..+...+..++
T Consensus 110 ~~~~~~~~d~~i~v~D~~~---~~s~~~~~~~~~~i-~~~~~~piilv~NK~D~~~~~~~~~~~~~~~~~~~~~~~ 181 (208)
T 3clv_A 110 VPLYYRGATCAIVVFDISN---SNTLDRAKTWVNQL-KISSNYIIILVANKIDKNKFQVDILEVQKYAQDNNLLFI 181 (208)
T ss_dssp HHHHHTTCSEEEEEEETTC---HHHHHHHHHHHHHH-HHHSCCEEEEEEECTTCC-CCSCHHHHHHHHHHTTCEEE
T ss_pred HHHHhcCCCEEEEEEECCC---HHHHHHHHHHHHHH-HhhCCCcEEEEEECCCcccccCCHHHHHHHHHHcCCcEE
Confidence 3455778999999876544 44455555555310 12234888888764 311011112345555555565433
No 231
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=22.91 E-value=91 Score=21.93 Aligned_cols=49 Identities=6% Similarity=0.056 Sum_probs=28.9
Q ss_pred HHHHHHHhcCeEEEEcccCCC----CCcHHH---HHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 4 LTYNTFLEFICFHLLTDLFSS----FVQGPL---KNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~----~i~~~l---Kn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+.+.+. ..++.++++.|-. .+|..+ +.+++|+.. +.-..+++.++|.|
T Consensus 49 ~~~~~l~-~~g~~Vi~vdYrlaPe~~~p~~~~D~~~al~~l~~--~~~~~~~i~l~G~S 104 (274)
T 2qru_A 49 ELKELFT-SNGYTVLALDYLLAPNTKIDHILRTLTETFQLLNE--EIIQNQSFGLCGRS 104 (274)
T ss_dssp HHHHHHH-TTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHH--HTTTTCCEEEEEET
T ss_pred HHHHHHH-HCCCEEEEeCCCCCCCCCCcHHHHHHHHHHHHHHh--ccccCCcEEEEEEC
Confidence 3444444 4467777888864 344444 346667752 11115678999988
No 232
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=22.84 E-value=1.3e+02 Score=20.04 Aligned_cols=22 Identities=18% Similarity=0.146 Sum_probs=13.9
Q ss_pred cCCCCeEEEEeecCCCChHHHHHH
Q 035766 43 VWADKAAAIVSAAGGSGGARAQYH 66 (128)
Q Consensus 43 ~~~~Kp~~~v~~sg~~gg~~a~~~ 66 (128)
.+..+++.++|.| .||..+...
T Consensus 91 ~~~~~~~~l~G~S--~Gg~~a~~~ 112 (286)
T 3qit_A 91 ELPDQPLLLVGHS--MGAMLATAI 112 (286)
T ss_dssp HSCSSCEEEEEET--HHHHHHHHH
T ss_pred hcCCCCEEEEEeC--HHHHHHHHH
Confidence 4455789999988 235444433
No 233
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=22.80 E-value=33 Score=24.29 Aligned_cols=60 Identities=8% Similarity=0.139 Sum_probs=30.4
Q ss_pred hhHHHHHHHhcCeEEEEcccCCCC--Cc------HHHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHH
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSSF--VQ------GPLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQY 65 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~~--i~------~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~ 65 (128)
|..+.+.+.+ ++-+.++.|-|. -| ..+..+.+++...-..+..+++.++|.| .||..+..
T Consensus 83 ~~~~~~~L~~--g~~vi~~D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S--~Gg~ia~~ 150 (306)
T 2r11_A 83 WYPNIADWSS--KYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDNLGIEKSHMIGLS--LGGLHTMN 150 (306)
T ss_dssp GTTTHHHHHH--HSEEEEECCTTSSSSCEECSCCCCHHHHHHHHHHHHHHTTCSSEEEEEET--HHHHHHHH
T ss_pred HHHHHHHHhc--CCEEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCceeEEEEC--HHHHHHHH
Confidence 6666666664 566666666542 11 1223333333210023444788999988 23444443
No 234
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=22.62 E-value=32 Score=25.84 Aligned_cols=42 Identities=14% Similarity=0.002 Sum_probs=13.1
Q ss_pred EcccCCCCCcHHHHHHHHhhcCCC--CcCCCCeEEEEeecCCCC
Q 035766 18 LTDLFSSFVQGPLKNAIDWASRPP--NVWADKAAAIVSAAGGSG 59 (128)
Q Consensus 18 ~tPeYn~~i~~~lKn~iD~l~~~~--~~~~~Kp~~~v~~sg~~g 59 (128)
.+..+++--+..+|+--+++.... ..+.+|.++|.|++|.-|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~~ilVtGatG~iG 45 (377)
T 2q1s_A 2 GSSHHHHHHSSGLVPRGSHMPVIMNASKLANTNVMVVGGAGFVG 45 (377)
T ss_dssp ------------------------CCGGGTTCEEEEETTTSHHH
T ss_pred CCccccccccCCcccccccCCCCCChHHhCCCEEEEECCccHHH
Confidence 345566667788888888886421 357889998888775444
No 235
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=22.46 E-value=40 Score=21.42 Aligned_cols=47 Identities=11% Similarity=0.155 Sum_probs=27.0
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+ +..+.+.-.|+..-. ..-.++|+.+++.=
T Consensus 70 ~~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~nK 117 (170)
T 1g16_A 70 TAYYRGAMGIILVYDITD---ERTFTNIKQWFKTVNEHANDEAQLLLVGNK 117 (170)
T ss_dssp HHHHTTEEEEEEEEETTC---HHHHHTHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred HHHhccCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCcEEEEEEC
Confidence 345678999999876544 334444444442100 11247888888764
No 236
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=22.43 E-value=2e+02 Score=21.81 Aligned_cols=16 Identities=6% Similarity=-0.162 Sum_probs=12.0
Q ss_pred HHHHHHhcCeEEEEcc
Q 035766 5 TYNTFLEFICFHLLTD 20 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tP 20 (128)
..+.+..||.+|++++
T Consensus 260 ~~~~l~~aD~vliv~~ 275 (398)
T 3ez2_A 260 LKNALASANILFTPLP 275 (398)
T ss_dssp HHHHHHHCSEEEEEEC
T ss_pred HHHHHHHCCEEEEEec
Confidence 3566788999888775
No 237
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=22.39 E-value=44 Score=21.44 Aligned_cols=47 Identities=9% Similarity=0.105 Sum_probs=28.4
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+ +..+.+..+|+..-. ..-.++|+.+++.=
T Consensus 81 ~~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~nK 128 (179)
T 2y8e_A 81 PSYIRDSTVAVVVYDITN---TNSFHQTSKWIDDVRTERGSDVIIMLVGNK 128 (179)
T ss_dssp HHHHHTCSEEEEEEETTC---HHHHHTHHHHHHHHHHHHTTSSEEEEEEEC
T ss_pred HHHhcCCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCcEEEEEEC
Confidence 345788999999876544 445555555553100 11247888887753
No 238
>2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A*
Probab=22.30 E-value=2.5e+02 Score=22.28 Aligned_cols=69 Identities=14% Similarity=0.197 Sum_probs=34.6
Q ss_pred HHHHHHHhhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCcee--eccceeeeccCCCCCccCCCCCCCCHHH
Q 035766 29 PLKNAIDWASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLHF--VNKPEYFLNAFQPPAKFDSDGNLIDEES 106 (128)
Q Consensus 29 ~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~--~~~~~~~i~~~~~~~~fd~~g~l~~~~~ 106 (128)
-++.+++++..| .-.-| +|+.+|..|=......|..+|+..|..+ +..|.+ ..+ .+.+.-+|...+++.
T Consensus 49 r~~~ll~~lg~p--~~~~~---vI~VtGTNGKtST~~~l~~iL~~~G~~vG~~tSp~l--~~~--~eri~i~G~~i~~~~ 119 (487)
T 2vos_A 49 RISALMDLLGSP--QRSYP---SIHIAGTNGKTSVARMVDALVTALHRRTGRTTSPHL--QSP--VERISIDGKPISPAQ 119 (487)
T ss_dssp HHHHHHHHTTCG--GGSSC---EEEEECSSSHHHHHHHHHHHHHHTTCCEEEECSSCS--SCG--GGGEEETTEECCHHH
T ss_pred HHHHHHHHcCCc--hhcCe---EEEEeCCCCcHHHHHHHHHHHHHcCCCeEEECCCCc--Ccc--cceEEECCEECCHHH
Confidence 344555555442 22223 3444454454556677888898877655 211111 111 233333677777654
No 239
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=22.26 E-value=1e+02 Score=22.60 Aligned_cols=26 Identities=4% Similarity=-0.129 Sum_probs=19.5
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhh
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWA 37 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l 37 (128)
.+.+.+||.||+++|.+. ++.+++-+
T Consensus 60 ~~~~~~aDvVilavp~~~------~~~vl~~l 85 (298)
T 2pv7_A 60 ESILANADVVIVSVPINL------TLETIERL 85 (298)
T ss_dssp HHHHTTCSEEEECSCGGG------HHHHHHHH
T ss_pred HHHhcCCCEEEEeCCHHH------HHHHHHHH
Confidence 456789999999999875 55555555
No 240
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=22.09 E-value=96 Score=23.56 Aligned_cols=26 Identities=4% Similarity=0.114 Sum_probs=18.7
Q ss_pred HHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 29 PLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 29 ~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
-...++||+... .....++++++|.|
T Consensus 213 D~~~ald~l~~~-~~vd~~rI~v~G~S 238 (398)
T 3nuz_A 213 LDMQVLNWMKTQ-KHIRKDRIVVSGFS 238 (398)
T ss_dssp HHHHHHHHHTTC-SSEEEEEEEEEEEG
T ss_pred HHHHHHHHHHhC-CCCCCCeEEEEEEC
Confidence 356789999642 23456789999988
No 241
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=22.03 E-value=51 Score=22.06 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=27.1
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+ +..+.+.-.|+.... ..-.++|+.+++.=
T Consensus 87 ~~~~~~~d~ii~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~nK 134 (213)
T 3cph_A 87 TAYYRGAMGIILVYDVTD---ERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 (213)
T ss_dssp HHHHTTCSEEEEEEETTC---HHHHHTHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred HHHhccCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 345788999999876544 334444444442100 11236888888764
No 242
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=21.95 E-value=29 Score=25.63 Aligned_cols=42 Identities=7% Similarity=0.049 Sum_probs=24.5
Q ss_pred hcCeEEEEcccCC-CCCcHHHHHHHHhhcCCC-CcCCCCeEEEEee
Q 035766 11 EFICFHLLTDLFS-SFVQGPLKNAIDWASRPP-NVWADKAAAIVSA 54 (128)
Q Consensus 11 ~AD~ii~~tPeYn-~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~ 54 (128)
.+|.+|++|--+. -.+|+ ...+....... ..+.+|+++++|.
T Consensus 131 ~~d~vVlAtG~~~~p~ip~--~~~~~~~~~~~~~~~~~~~vvVvG~ 174 (369)
T 3d1c_A 131 HADYIFVATGDYNFPKKPF--KYGIHYSEIEDFDNFNKGQYVVIGG 174 (369)
T ss_dssp EEEEEEECCCSTTSBCCCS--SSCEEGGGCSCGGGSCSSEEEEECC
T ss_pred EeCEEEECCCCCCccCCCC--CceechhhcCChhhcCCCEEEEECC
Confidence 5799999998764 24554 11111111111 4567899999873
No 243
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=21.94 E-value=34 Score=23.70 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=11.5
Q ss_pred CcCCCCeEEEEeecCCCCh
Q 035766 42 NVWADKAAAIVSAAGGSGG 60 (128)
Q Consensus 42 ~~~~~Kp~~~v~~sg~~gg 60 (128)
..+.+|.++|.|++|.-|.
T Consensus 17 ~~l~~~~ilVtGatG~iG~ 35 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVAR 35 (236)
T ss_dssp ----CCEEEEETTTSHHHH
T ss_pred cCcCCCeEEEECCCChHHH
Confidence 5688999999988754443
No 244
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=21.87 E-value=57 Score=21.47 Aligned_cols=23 Identities=9% Similarity=0.033 Sum_probs=15.0
Q ss_pred HHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 29 PLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 29 ~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+..++|++.. ...+++.++|.|
T Consensus 91 d~~~~~~~l~~----~~~~~i~l~G~S 113 (238)
T 1ufo_A 91 EARRVAEEAER----RFGLPLFLAGGS 113 (238)
T ss_dssp HHHHHHHHHHH----HHCCCEEEEEET
T ss_pred HHHHHHHHHHh----ccCCcEEEEEEC
Confidence 45556777642 112889999988
No 245
>1qd9_A Purine regulatory protein YABJ; perchloric acid soluble protein, purine regulation, YJGF/YER057C family, gene regulation; 1.70A {Bacillus subtilis} SCOP: d.79.1.1
Probab=21.62 E-value=1.1e+02 Score=19.55 Aligned_cols=39 Identities=15% Similarity=0.339 Sum_probs=26.1
Q ss_pred ceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 035766 82 PEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLR 123 (128)
Q Consensus 82 ~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~ 123 (128)
..+++++ .-.+|++|.+..+..+++.++.++++....++
T Consensus 24 ~~v~vSG---q~~~~~~g~~~~~d~~~Q~~~~l~ni~~~L~~ 62 (124)
T 1qd9_A 24 NMFYSSG---QIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEE 62 (124)
T ss_dssp TEEEECC---BCSBCTTSCBCCSCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEee---eCCcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3556665 34566688876566777777778777776654
No 246
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=21.52 E-value=2.5e+02 Score=21.42 Aligned_cols=58 Identities=16% Similarity=0.030 Sum_probs=36.0
Q ss_pred cCeEEEEcccCCCCCcHHHHHHHHhhcCCC------------------------CcCCCCeEEEEeecCCCChHHHHHHH
Q 035766 12 FICFHLLTDLFSSFVQGPLKNAIDWASRPP------------------------NVWADKAAAIVSAAGGSGGARAQYHL 67 (128)
Q Consensus 12 AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~------------------------~~~~~Kp~~~v~~sg~~gg~~a~~~L 67 (128)
+|+|++=+|. .+.+.-+-.+.+.|- +.++|+.++++|-. .+....+
T Consensus 104 ~D~iviR~~~-----~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~-----~rva~Sl 173 (323)
T 3gd5_A 104 VDGLAIRTFA-----QTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIRENFGRLAGLKLAYVGDG-----NNVAHSL 173 (323)
T ss_dssp CSEEEEECSS-----HHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC-----CHHHHHH
T ss_pred CCEEEEecCC-----hhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCC-----CcHHHHH
Confidence 6888887775 345555555554331 56899999999754 2333344
Q ss_pred HHhhhhcCceee
Q 035766 68 RQIGVYLDLHFV 79 (128)
Q Consensus 68 ~~~l~~~g~~~~ 79 (128)
-..+..+|+.+.
T Consensus 174 ~~~~~~~G~~v~ 185 (323)
T 3gd5_A 174 LLGCAKVGMSIA 185 (323)
T ss_dssp HHHHHHHTCEEE
T ss_pred HHHHHHcCCEEE
Confidence 445677788654
No 247
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=21.32 E-value=34 Score=22.74 Aligned_cols=68 Identities=12% Similarity=0.025 Sum_probs=35.4
Q ss_pred HHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC--Cc--CCCCeEEEEeec-CCCChHH--HHHHHHHhhhhcCceee
Q 035766 9 FLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP--NV--WADKAAAIVSAA-GGSGGAR--AQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 9 i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~--~~--~~~Kp~~~v~~s-g~~gg~~--a~~~L~~~l~~~g~~~~ 79 (128)
+..+|++|++...-+ +..+.+...|+..-. .. ..++|+.+++.= .-....+ ....++.....+++..+
T Consensus 94 ~~~~d~~i~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl~~~~~~v~~~~~~~~~~~~~~~~~ 168 (208)
T 2yc2_C 94 WNGVYYAILVFDVSS---MESFESCKAWFELLKSARPDRERPLRAVLVANKTDLPPQRHQVRLDMAQDWATTNTLDFF 168 (208)
T ss_dssp CCCCCEEEEEEETTC---HHHHHHHHHHHHHHHHHCSCTTSCCEEEEEEECC-------CCCHHHHHHHHHHTTCEEE
T ss_pred HhhCcEEEEEEECCC---HHHHHHHHHHHHHHHHhhcccccCCcEEEEEECcccchhhccCCHHHHHHHHHHcCCEEE
Confidence 467999999877554 445555555553100 01 258898888864 2111011 12345555666665433
No 248
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=21.32 E-value=61 Score=25.03 Aligned_cols=31 Identities=29% Similarity=0.633 Sum_probs=20.7
Q ss_pred CeEEEEeecCCCChHHHHHHHHHhhhhcCceee
Q 035766 47 KAAAIVSAAGGSGGARAQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 47 Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~~~ 79 (128)
|.+.||| |+.+|..+..+|++........++
T Consensus 3 K~VvIIG--gG~aGl~aA~~L~~~~~~~~VtlI 33 (430)
T 3hyw_A 3 KHVVVIG--GGVGGIATAYNLRNLMPDLKITLI 33 (430)
T ss_dssp CEEEEEC--SSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CcEEEEC--CCHHHHHHHHHHhccCcCCeEEEE
Confidence 7788888 446678888888876543344444
No 249
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=21.31 E-value=2.5e+02 Score=20.61 Aligned_cols=65 Identities=17% Similarity=0.181 Sum_probs=38.8
Q ss_pred cCeEEEEcccCCCCCcHHHHHH-----------------------HHhhcCCCCcCCCCeEEEEeec-CCCChH-----H
Q 035766 12 FICFHLLTDLFSSFVQGPLKNA-----------------------IDWASRPPNVWADKAAAIVSAA-GGSGGA-----R 62 (128)
Q Consensus 12 AD~ii~~tPeYn~~i~~~lKn~-----------------------iD~l~~~~~~~~~Kp~~~v~~s-g~~gg~-----~ 62 (128)
-|.+|+.+|.|++.....+... +|.+. ..+..++.+++... .+.|+. .
T Consensus 128 ~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~---~~l~~~~~~v~~~p~np~g~~~~~~~~ 204 (406)
T 4adb_A 128 KSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSAS---ALIDDSTCAVIVEPIQGEGGVVPASNA 204 (406)
T ss_dssp CCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHH---TTCSTTEEEEEECSEETTTTSEECCHH
T ss_pred CcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHH---HHhcCCeEEEEEeCCcCCCCCccCCHH
Confidence 3889999999999875554322 12221 34556666666554 444542 2
Q ss_pred HHHHHHHhhhhcCceee
Q 035766 63 AQYHLRQIGVYLDLHFV 79 (128)
Q Consensus 63 a~~~L~~~l~~~g~~~~ 79 (128)
-...|..++..-|+.++
T Consensus 205 ~l~~l~~l~~~~~~~li 221 (406)
T 4adb_A 205 FLQGLRELCNRHNALLI 221 (406)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 34566666766676655
No 250
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=21.26 E-value=2.6e+02 Score=20.81 Aligned_cols=13 Identities=8% Similarity=-0.067 Sum_probs=9.8
Q ss_pred HHHHHHhcCeEEE
Q 035766 5 TYNTFLEFICFHL 17 (128)
Q Consensus 5 ~~~~i~~AD~ii~ 17 (128)
-.+.+++||.|+.
T Consensus 35 A~~~L~~aDvI~~ 47 (296)
T 3kwp_A 35 AVKTLTAVDLIAA 47 (296)
T ss_dssp HHHHHHHSSEEEE
T ss_pred HHHHHhHhhhhhh
Confidence 3577888888777
No 251
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=21.25 E-value=59 Score=21.91 Aligned_cols=68 Identities=7% Similarity=0.015 Sum_probs=36.2
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEeec-CCCCh-HHHHHHHHHhhhhcCc
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSAA-GGSGG-ARAQYHLRQIGVYLDL 76 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~s-g~~gg-~~a~~~L~~~l~~~g~ 76 (128)
...+..+|++|++...-+ +..+.++..|+..-. ..-.++|+.+++.= .-... ....+.++..+...++
T Consensus 96 ~~~~~~~d~iilv~D~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~ 166 (201)
T 2hup_A 96 QSYYRSANGAILAYDITK---RSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDI 166 (201)
T ss_dssp HHHHTTCSEEEEEEETTB---HHHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTC
T ss_pred HHHHhhCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCCEEEEEECCccccccccCHHHHHHHHHHcCC
Confidence 445778999999876443 445555555553100 11257888888753 21110 0112345555555665
No 252
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=21.18 E-value=1.2e+02 Score=22.22 Aligned_cols=19 Identities=21% Similarity=0.239 Sum_probs=15.7
Q ss_pred CeEEEEcccCCCCCcHHHH
Q 035766 13 ICFHLLTDLFSSFVQGPLK 31 (128)
Q Consensus 13 D~ii~~tPeYn~~i~~~lK 31 (128)
|.||+..|.|++.....+.
T Consensus 118 ~~vl~~~~~y~~~~~~~~~ 136 (375)
T 2eh6_A 118 WKFISFENSFHGRTYGSLS 136 (375)
T ss_dssp CEEEEEBTCCCCSSHHHHH
T ss_pred CEEEEECCCcCCCchhhhh
Confidence 8899999999988766554
No 253
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=21.14 E-value=86 Score=25.27 Aligned_cols=50 Identities=4% Similarity=-0.015 Sum_probs=31.7
Q ss_pred HHHHHHHhcCeEEEEcccCCCCCc------------------HHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 4 LTYNTFLEFICFHLLTDLFSSFVQ------------------GPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 4 ~~~~~i~~AD~ii~~tPeYn~~i~------------------~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.+.+.+.+. ++.+++|.|-+.-- .-+..++||+... .....++++++|.|
T Consensus 543 ~~~~~l~~~-G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~~i~l~G~S 610 (741)
T 2ecf_A 543 LFNQYLAQQ-GYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQ-PWVDPARIGVQGWS 610 (741)
T ss_dssp HHHHHHHHT-TCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTS-TTEEEEEEEEEEET
T ss_pred HHHHHHHhC-CCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhc-CCCChhhEEEEEEC
Confidence 345555544 78888888865321 2355677888641 22445789999988
No 254
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=21.13 E-value=1.7e+02 Score=21.56 Aligned_cols=46 Identities=9% Similarity=0.016 Sum_probs=31.4
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+..||+++++..--++ ++..-+.+++.+.. ...++|+.++..=
T Consensus 81 ~~~l~~ad~il~VvD~~~~-~~~~~~~i~~~l~~---~~~~~p~ilV~NK 126 (301)
T 1wf3_A 81 YEALADVNAVVWVVDLRHP-PTPEDELVARALKP---LVGKVPILLVGNK 126 (301)
T ss_dssp HHHTSSCSEEEEEEETTSC-CCHHHHHHHHHHGG---GTTTSCEEEEEEC
T ss_pred HHHHhcCCEEEEEEECCCC-CChHHHHHHHHHHh---hcCCCCEEEEEEC
Confidence 4557789999999887665 55555555566643 2357888887753
No 255
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=21.05 E-value=1.2e+02 Score=21.69 Aligned_cols=24 Identities=8% Similarity=-0.220 Sum_probs=17.4
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhh
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWA 37 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l 37 (128)
.+.++|.||+++|.+. ++.+++-+
T Consensus 63 ~~~~aDvVilavp~~~------~~~v~~~l 86 (290)
T 3b1f_A 63 FAALADVIILAVPIKK------TIDFIKIL 86 (290)
T ss_dssp TGGGCSEEEECSCHHH------HHHHHHHH
T ss_pred hhcCCCEEEEcCCHHH------HHHHHHHH
Confidence 4578999999999764 45555555
No 256
>3bz1_X Photosystem II PSBX protein; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 1s5l_X* 3bz2_X*
Probab=20.96 E-value=48 Score=18.64 Aligned_cols=14 Identities=14% Similarity=-0.119 Sum_probs=10.2
Q ss_pred CCCcHHHHHHHHhh
Q 035766 24 SFVQGPLKNAIDWA 37 (128)
Q Consensus 24 ~~i~~~lKn~iD~l 37 (128)
-+++|.|||+|-=+
T Consensus 10 ~~mTpSL~NFl~Sl 23 (50)
T 3bz1_X 10 LTITPSLKGFFIGL 23 (50)
T ss_dssp -CCCHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHH
Confidence 36889999987544
No 257
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=20.91 E-value=1.3e+02 Score=22.43 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=20.5
Q ss_pred HhcCeEEEEcccCCCCCcHHHHHHHHhhc
Q 035766 10 LEFICFHLLTDLFSSFVQGPLKNAIDWAS 38 (128)
Q Consensus 10 ~~AD~ii~~tPeYn~~i~~~lKn~iD~l~ 38 (128)
..||++++++|-|+..=...+...+.-+.
T Consensus 106 ~Gadavlv~~P~y~~~s~~~l~~~f~~va 134 (306)
T 1o5k_A 106 LGANGVLVVTPYYNKPTQEGLYQHYKYIS 134 (306)
T ss_dssp HTCSEEEEECCCSSCCCHHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHH
Confidence 46999999999998765555555544443
No 258
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=20.84 E-value=29 Score=22.97 Aligned_cols=50 Identities=12% Similarity=-0.024 Sum_probs=26.5
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
...+..+|++|++...-+..-...++.+++++........++|+.+++.=
T Consensus 74 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~~~~~piilv~nK 123 (199)
T 2gf0_A 74 RLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNK 123 (199)
T ss_dssp HHHHHHCSEEEEEEETTCHHHHHTTHHHHHHHHHHHSCGGGSCEEEEEEC
T ss_pred HHhhccCCEEEEEEECcCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEC
Confidence 34567899999986654422112233333333210012457788887763
No 259
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=20.81 E-value=76 Score=26.07 Aligned_cols=48 Identities=10% Similarity=-0.202 Sum_probs=32.4
Q ss_pred HHHHhcCeEEEEcccCCCCC------------------cHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 7 NTFLEFICFHLLTDLFSSFV------------------QGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i------------------~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
..+.+..++++++|.|-++- ..-+..+++|+... .....++++++|.|
T Consensus 527 ~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~-~~~d~~ri~i~G~S 592 (740)
T 4a5s_A 527 TYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKM-GFVDNKRIAIWGWS 592 (740)
T ss_dssp HHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTS-TTEEEEEEEEEEET
T ss_pred HHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhc-CCcCCccEEEEEEC
Confidence 44555689999999998753 12344677888631 22345789999988
No 260
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=20.71 E-value=66 Score=20.16 Aligned_cols=47 Identities=11% Similarity=0.001 Sum_probs=27.8
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC--CcCCCCeEEEEeec
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP--NVWADKAAAIVSAA 55 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~--~~~~~Kp~~~v~~s 55 (128)
...+..+|+++++...-+ +..+.+.-+|+..-. ....++|+.+++.=
T Consensus 70 ~~~~~~~d~~i~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~~piilv~nK 118 (168)
T 1u8z_A 70 DNYFRSGEGFLCVFSITE---MESFAATADFREQILRVKEDENVPFLLVGNK 118 (168)
T ss_dssp HHHHHHCSEEEEEEETTC---HHHHHHHHHHHHHHHHHHCCTTSCEEEEEEC
T ss_pred HHHhhcCCEEEEEEECCC---HHHHHHHHHHHHHHHHhcCCCCCcEEEEEEC
Confidence 345678999999865443 445555555543100 12347888888763
No 261
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=20.62 E-value=38 Score=23.29 Aligned_cols=44 Identities=14% Similarity=0.204 Sum_probs=24.3
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCC-CcCCCCeEEEEee
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPP-NVWADKAAAIVSA 54 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~-~~~~~Kp~~~v~~ 54 (128)
.+..+|++|++...-+ +..+.++-.|+..-. ....++|+.+++.
T Consensus 82 ~~~~~d~vilV~D~~~---~~s~~~~~~~l~~i~~~~~~~~piilv~n 126 (223)
T 3cpj_B 82 YYRGAVGALIVYDISK---SSSYENCNHWLSELRENADDNVAVGLIGN 126 (223)
T ss_dssp GTTTCCEEEEEEC-CC---HHHHHHHHHHHHHHHHHCC--CEEEEEEC
T ss_pred HhccCCEEEEEEeCCC---HHHHHHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 3568999999865444 445555555543100 1234788888875
No 262
>2cvl_A TTHA0137, protein translation initiation inhibitor; structural genomics, NPPSFA; 1.65A {Thermus thermophilus} SCOP: d.79.1.1 PDB: 2csl_A 2cw4_A
Probab=20.58 E-value=98 Score=19.77 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=26.2
Q ss_pred ceeeeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 035766 82 PEYFLNAFQPPAKFDSDGNLIDEESKEKLKAVLLALRAFTLR 123 (128)
Q Consensus 82 ~~~~i~~~~~~~~fd~~g~l~~~~~~~~l~~~~~~l~~~~~~ 123 (128)
..+++++ .-.+|++|.+..+..+++.++.++++....++
T Consensus 24 ~~~~vSG---q~~~~~~g~~~~~~~~~Q~~~~l~ni~~~L~~ 62 (124)
T 2cvl_A 24 GFVFVSG---QIPLAPDGSLVEGDIRVQTERVMENLKAVLEA 62 (124)
T ss_dssp TEEEEEE---ECSBCTTSCBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEee---eCCcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3456665 34566678876566777788888877776654
No 263
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=20.53 E-value=1.4e+02 Score=20.89 Aligned_cols=38 Identities=11% Similarity=0.239 Sum_probs=24.4
Q ss_pred HHHHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEe
Q 035766 6 YNTFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVS 53 (128)
Q Consensus 6 ~~~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~ 53 (128)
.+.+.+.|.+||.|| ...+.+++++.+ .|.++++..+|
T Consensus 45 ~~~l~~~d~viftS~-------~aV~~~~~~l~~---~l~~~~~~aVG 82 (240)
T 3mw8_A 45 LDELSRADILIFIST-------SAVSFATPWLKD---QWPKATYYAVG 82 (240)
T ss_dssp HHHHTTCSEEEECSH-------HHHHHHHHHHTT---CCCSSEEEESS
T ss_pred HHHhcCCCEEEEECH-------HHHHHHHHHHHh---hCcCCeEEEEC
Confidence 456777888888886 356666666642 45566655554
No 264
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=20.46 E-value=1.3e+02 Score=21.83 Aligned_cols=15 Identities=0% Similarity=-0.538 Sum_probs=12.8
Q ss_pred HHHhcCeEEEEcccC
Q 035766 8 TFLEFICFHLLTDLF 22 (128)
Q Consensus 8 ~i~~AD~ii~~tPeY 22 (128)
.+++||.||+++|+.
T Consensus 97 ~~~~aD~Vi~avp~~ 111 (302)
T 1f0y_A 97 VVHSTDLVVEAIVEN 111 (302)
T ss_dssp HTTSCSEEEECCCSC
T ss_pred hhcCCCEEEEcCcCc
Confidence 567899999999974
No 265
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=20.46 E-value=1.3e+02 Score=20.79 Aligned_cols=49 Identities=6% Similarity=-0.037 Sum_probs=28.6
Q ss_pred hhHHHHHHHhcCeEEEEcccCCC-----------CCcHHHHHHHHhhcCCCCcC-CCCeEEEEeec-C
Q 035766 2 WLLTYNTFLEFICFHLLTDLFSS-----------FVQGPLKNAIDWASRPPNVW-ADKAAAIVSAA-G 56 (128)
Q Consensus 2 ~~~~~~~i~~AD~ii~~tPeYn~-----------~i~~~lKn~iD~l~~~~~~~-~~Kp~~~v~~s-g 56 (128)
|..+.+.+.+ ++-+.++.+-| ++......+++.+. .+ ..+|+.++|.| |
T Consensus 67 ~~~l~~~L~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~----~~~~~~~~~lvG~S~G 128 (280)
T 3qmv_A 67 FRGWQERLGD--EVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALE----EHRLTHDYALFGHSMG 128 (280)
T ss_dssp GTTHHHHHCT--TEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHH----HTTCSSSEEEEEETHH
T ss_pred HHHHHHhcCC--CceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhCCCCCEEEEEeCHh
Confidence 6666777765 45555554432 33334444444443 33 57899999999 5
No 266
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=20.40 E-value=44 Score=24.18 Aligned_cols=49 Identities=16% Similarity=0.016 Sum_probs=30.3
Q ss_pred HHHHHHhcCeEEEEcccCCCCC------------c---HHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 5 TYNTFLEFICFHLLTDLFSSFV------------Q---GPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 5 ~~~~i~~AD~ii~~tPeYn~~i------------~---~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
+.+.+.+ .|+.++.|.|-+.- + ..+..++||+... .....+++.++|.|
T Consensus 116 ~~~~l~~-~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~~~~l~G~S 179 (367)
T 2hdw_A 116 YAQTMAE-RGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVDFISLL-PEVNRERIGVIGIC 179 (367)
T ss_dssp HHHHHHH-TTCEEEEECCTTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHC-TTEEEEEEEEEEET
T ss_pred HHHHHHH-CCCEEEEECCCCcCCCCCcCccccchhhHHHHHHHHHHHHHhC-cCCCcCcEEEEEEC
Confidence 4445554 47888888875311 1 3456678888531 22345789999998
No 267
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=20.37 E-value=93 Score=25.23 Aligned_cols=67 Identities=10% Similarity=-0.026 Sum_probs=35.7
Q ss_pred HHHHhcCeEEEEcccCCCCCcHHH-HHH-------HH-hhcCCCCcCCCCeEEEEeecCCCChHHHHHHHHHhhhhcCce
Q 035766 7 NTFLEFICFHLLTDLFSSFVQGPL-KNA-------ID-WASRPPNVWADKAAAIVSAAGGSGGARAQYHLRQIGVYLDLH 77 (128)
Q Consensus 7 ~~i~~AD~ii~~tPeYn~~i~~~l-Kn~-------iD-~l~~~~~~~~~Kp~~~v~~sg~~gg~~a~~~L~~~l~~~g~~ 77 (128)
+.+.+...+++-+|.+|.++.-.+ .|. .| |...++..+.||.++|+|.+ .-| ......+ ..+|+.
T Consensus 209 ~a~~~~Gilv~p~~~vn~sVae~l~r~~~~~~~~l~~gw~r~~~~~l~GktVgIIG~G-~IG-~~vA~~l----~~~G~~ 282 (479)
T 1v8b_A 209 KKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLPDGLMRATDFLISGKIVVICGYG-DVG-KGCASSM----KGLGAR 282 (479)
T ss_dssp HHHHHTTCCCSEEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTSEEEEECCS-HHH-HHHHHHH----HHHTCE
T ss_pred HHHHHcCCEEeccCCccHHHHHHHHhchHhHHHHHhhhhhhccccccCCCEEEEEeeC-HHH-HHHHHHH----HhCcCE
Confidence 344455567788888887443221 111 11 21111147899999999976 222 2223333 345776
Q ss_pred ee
Q 035766 78 FV 79 (128)
Q Consensus 78 ~~ 79 (128)
|+
T Consensus 283 Vi 284 (479)
T 1v8b_A 283 VY 284 (479)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 268
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=20.23 E-value=45 Score=21.52 Aligned_cols=45 Identities=16% Similarity=0.240 Sum_probs=25.6
Q ss_pred HHHhcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCc-CCCCeEEEEeec
Q 035766 8 TFLEFICFHLLTDLFSSFVQGPLKNAIDWASRPPNV-WADKAAAIVSAA 55 (128)
Q Consensus 8 ~i~~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~-~~~Kp~~~v~~s 55 (128)
.+..+|++|++...-+ +..+.+.-.|+..-... -.++|+.+++.=
T Consensus 80 ~~~~~d~ii~v~d~~~---~~s~~~~~~~~~~i~~~~~~~~piilv~nK 125 (180)
T 2g6b_A 80 YYRDAHALLLLYDVTN---KASFDNIQAWLTEIHEYAQHDVALMLLGNK 125 (180)
T ss_dssp CGGGCSEEEEEEETTC---HHHHHTHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred HccCCCEEEEEEECCC---HHHHHHHHHHHHHHHHhCCCCCcEEEEEEC
Confidence 3578999999876544 34444444444210011 157888888764
No 269
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.22 E-value=45 Score=24.42 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=11.7
Q ss_pred cccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeecCCCC
Q 035766 19 TDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAAGGSG 59 (128)
Q Consensus 19 tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~sg~~g 59 (128)
+..+++--+..+|-.-+.+. .+.+|.+.|.|++|+-|
T Consensus 3 ~~~~~~~~~~~~~~~~~~m~----~l~~k~vlVTGas~gIG 39 (297)
T 1xhl_A 3 SSHHHHHHSSGLVPRGSHMA----RFSGKSVIITGSSNGIG 39 (297)
T ss_dssp ------------------------CCTTCEEEETTCSSHHH
T ss_pred CccccccccCCccccccccc----CCCCCEEEEeCCCcHHH
Confidence 33444455555665555553 47899988887664333
No 270
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=20.16 E-value=46 Score=23.86 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=13.4
Q ss_pred CcCCCCeEEEEeecCCCC
Q 035766 42 NVWADKAAAIVSAAGGSG 59 (128)
Q Consensus 42 ~~~~~Kp~~~v~~sg~~g 59 (128)
..+.+|.+.|.|++|+-|
T Consensus 17 ~~l~~k~~lVTGas~gIG 34 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLG 34 (267)
T ss_dssp CCCTTCEEEEETTTSHHH
T ss_pred cCCCCCEEEEECCCCHHH
Confidence 678999998888774333
No 271
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=20.14 E-value=2.9e+02 Score=21.09 Aligned_cols=39 Identities=5% Similarity=-0.066 Sum_probs=25.7
Q ss_pred hcCeEEEEcccCCCCCcHHHHHHHHhhcCCCCcCCCCeEEEEeec
Q 035766 11 EFICFHLLTDLFSSFVQGPLKNAIDWASRPPNVWADKAAAIVSAA 55 (128)
Q Consensus 11 ~AD~ii~~tPeYn~~i~~~lKn~iD~l~~~~~~~~~Kp~~~v~~s 55 (128)
.++|||+.+-- +|++|+.+..+|..+.. +|.||..++=.
T Consensus 245 g~~GiVle~~G-~Gn~p~~~~~~l~~a~~-----~Gi~VV~~Src 283 (334)
T 3nxk_A 245 GTKGIVVAGSG-AGSIHKNQKDVLKELLK-----KGLKVVVSSRV 283 (334)
T ss_dssp TCCEEEEEEBT-TTBCCHHHHHHHHHHHT-----TTCEEEEEESS
T ss_pred CCCEEEEeeEC-CCCCcHHHHHHHHHHHH-----CCCEEEEeCCC
Confidence 47888888755 67788766666655532 46777666654
No 272
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=20.10 E-value=63 Score=24.94 Aligned_cols=45 Identities=13% Similarity=0.216 Sum_probs=27.1
Q ss_pred HhcCeEEEEcccCCC----CCcHHHHHHH-------Hhh-c-CCCCcCCCCeEEEEeec
Q 035766 10 LEFICFHLLTDLFSS----FVQGPLKNAI-------DWA-S-RPPNVWADKAAAIVSAA 55 (128)
Q Consensus 10 ~~AD~ii~~tPeYn~----~i~~~lKn~i-------D~l-~-~~~~~~~~Kp~~~v~~s 55 (128)
..+|.+|++|--|+. .+||. ..+. -+. . +....+.+|.|+|||.+
T Consensus 164 ~~~d~VVvAtG~~s~p~~p~i~G~-~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G 221 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYIPNIKGL-DEYAKAVPGSVLHSSLFREPELFVGESVLVVGGA 221 (447)
T ss_dssp EEESEEEECCCSSSSBCBCCCBTH-HHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSS
T ss_pred EEeCEEEECCCCCCCCCCCCCCCh-hhhhccCCccEEEecccCChhhcCCCEEEEEccC
Confidence 368999999988754 35553 2221 111 1 11146789999999844
No 273
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=20.06 E-value=1e+02 Score=22.82 Aligned_cols=65 Identities=22% Similarity=0.198 Sum_probs=38.0
Q ss_pred cCeEEEEcccCCCCCcHHHHH--------H---------------HHhhcCCCCcCCCCeEEEEeec--CCCChHHH---
Q 035766 12 FICFHLLTDLFSSFVQGPLKN--------A---------------IDWASRPPNVWADKAAAIVSAA--GGSGGARA--- 63 (128)
Q Consensus 12 AD~ii~~tPeYn~~i~~~lKn--------~---------------iD~l~~~~~~~~~Kp~~~v~~s--g~~gg~~a--- 63 (128)
-|.+|+.+|.|++.....+.. . +|-+. ..+..++.+++... +..|....
T Consensus 124 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~---~~l~~~~~~v~~~~~~~~~G~~~~~~~ 200 (395)
T 3nx3_A 124 GGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVE---KLVNEKTCAIILESVQGEGGINPANKD 200 (395)
T ss_dssp TCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHH---TTCCTTEEEEEEESEECTTSCEECCHH
T ss_pred CCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHH---HhccCCeEEEEEeCccCCCCcccCCHH
Confidence 489999999999876443321 0 12221 34556676666655 43343211
Q ss_pred -HHHHHHhhhhcCceee
Q 035766 64 -QYHLRQIGVYLDLHFV 79 (128)
Q Consensus 64 -~~~L~~~l~~~g~~~~ 79 (128)
...++.++..-|+.++
T Consensus 201 ~l~~l~~l~~~~~~~li 217 (395)
T 3nx3_A 201 FYKALRKLCDEKDILLI 217 (395)
T ss_dssp HHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 5667777766666655
Done!