Query 035767
Match_columns 418
No_of_seqs 230 out of 1790
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 10:08:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035767.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035767hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1o70_A Fasciclin I, FAS I, FCN 100.0 3.4E-46 1.2E-50 370.5 15.4 282 18-326 3-313 (324)
2 1w7d_A Fasciclin-like protein; 99.9 8.3E-27 2.8E-31 203.5 5.0 129 182-324 3-137 (137)
3 2vxp_A Transforming growth fac 99.9 1.6E-25 5.6E-30 194.0 9.6 128 182-321 2-132 (132)
4 1nyo_A Immunogenic protein MPT 99.9 1.3E-25 4.5E-30 201.6 6.2 128 182-324 28-163 (163)
5 1w7d_A Fasciclin-like protein; 99.9 1.8E-22 6.2E-27 175.9 7.0 126 20-170 2-136 (137)
6 2vxp_A Transforming growth fac 99.9 1.4E-21 4.9E-26 169.1 11.4 124 21-168 2-132 (132)
7 1nyo_A Immunogenic protein MPT 99.8 3.6E-21 1.2E-25 172.7 8.2 124 20-170 27-162 (163)
8 1o70_A Fasciclin I, FAS I, FCN 99.8 1.8E-20 6.3E-25 185.4 11.2 138 182-324 6-158 (324)
9 1oqy_A HHR23A, UV excision rep 16.2 7.3E+02 0.025 23.9 10.6 10 240-249 30-39 (368)
10 3bpd_A Uncharacterized protein 10.9 2E+02 0.0068 22.8 3.2 16 305-320 68-83 (100)
No 1
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=100.00 E-value=3.4e-46 Score=370.46 Aligned_cols=282 Identities=14% Similarity=0.180 Sum_probs=213.3
Q ss_pred cCcccHHHHHh------cCCCcHHHHHHHhhcc--hHHHHccCCcEEEEEcCChhhhhccCC---CCHHHHHHHHhhccc
Q 035767 18 SSAHNITDILK------DFPEYSQFNSYLTQTK--LADEINSRQTITVLVLPNGAMSDLTAK---HPLSVIKSALSLLVL 86 (418)
Q Consensus 18 a~a~ni~~iL~------~~~~~S~f~~~L~~t~--L~~~L~~~~~~TvfAPtN~Af~~l~~~---~~~~~l~~iL~yHil 86 (418)
+...||+++|+ ++++||+|.++|++++ |.++|++.++||||||+|+||.++... .+.+.++++|+|||+
T Consensus 3 ~~~~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv 82 (324)
T 1o70_A 3 AADTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHII 82 (324)
T ss_dssp ----------------CCHHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEE
T ss_pred eehhhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEe
Confidence 45689999998 6789999999999999 999999999999999999999876321 168899999999999
Q ss_pred cCcCCccccccccCC-ceeeeccccccCCCCCCCceEEEEEc-CCCeEEEeeCCCCCccceEEeeeccccccccceee-e
Q 035767 87 LDYYDPQKLHQISKG-TTLSTTLYQTTGNAPGNLGFVNITDL-QGGKVGFGSAASGSKLDSTYTKSVKQIPYNVSVLE-I 163 (418)
Q Consensus 87 ~g~~~~~~L~~l~~g-~~~~~Tl~~~~g~~~~~~g~v~it~~-~~g~v~~~~~~~g~~~~a~vv~~v~di~~~ngVih-I 163 (418)
+|++..++|+....+ ...++|+.+.. ..+++++.. .++.+.++. +..+++|++. |+.++||||| |
T Consensus 83 ~g~~~~~~l~~~~~~~~~~~~Tl~g~~------~l~~~v~~~~~~~~v~v~~----g~~~a~v~~~--di~~~NGvIhvI 150 (324)
T 1o70_A 83 KDRLNVDKIRQKNANLIAQVPTVNNNT------FLYFNVRGEGSDTVITVEG----GGVNATVIQA--DVAQTNGYVHII 150 (324)
T ss_dssp SSCCCHHHHHHHTSSSCCCEEBSSTTC------EEEEEEESCGGGCEEEEEE----TTEEEEEEEE--EEECSSEEEEEE
T ss_pred CCeecHHHHhhccCCCceEEEcCCCCc------eEEEEEeecCCceEEEEcC----CceeEEEEec--cccccCcEEEEE
Confidence 999999998554322 22567775311 122344321 234566653 2346889998 9999999999 9
Q ss_pred cccccCCCcCCCCCCCCcccHHHHHhhhh-HHHHHHHHHhcChHHHhhccCCCCeEEEecCcHHHhccC----CCcccCC
Q 035767 164 SSPIIAPGILTAPAPSADVNITALLEKAG-CKTFASLLVSSGVIKTFESAISKGLTVFAPSDEAFKAAG----VPDLTKL 238 (418)
Q Consensus 164 d~vL~pp~~~~p~~~p~~~~l~~~L~~~~-~S~f~~lL~~agl~~~l~~~~~~~~TvFAPtn~AF~~l~----~~~l~~L 238 (418)
|+||.||. .++.++|++.+ |++|.++++.+|+.+.|+.. .+++|||||+|+||++++ ...++.|
T Consensus 151 D~VL~pp~----------~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~~-~~~~TvFAPtd~Af~~l~~~~~~~~~~~l 219 (324)
T 1o70_A 151 DHVLGVPY----------TTVLGKLESDPMMSDTYKMGKFSHFNDQLNNT-QRRFTYFVPRDKGWQKTELDYPSAHKKLF 219 (324)
T ss_dssp SSCTTSCC----------SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGCS-SSEEEEEEECHHHHHHHHHHCHHHHHHHT
T ss_pred chhhhhch----------hhHHHHhhcCchHHHHHHHHHhhCHHHHhCCC-CCCeEEEEeChHHHHhhhhhchhHHHHHh
Confidence 99999874 47999999877 99999999999999999853 268999999999999984 1123334
Q ss_pred CH---HHHHHHhhccccCC--CcccccccccCC-----cceeeeccCCCceEEEEEecCCeEEEEeCCcceEEeeccccC
Q 035767 239 TN---AEVVSLLQYHAANG--YNPVGTLKTTKG-----SISTLATNGAGKFDLTVTTAGDSVTLHTGVDSSRLADTVLDS 308 (418)
Q Consensus 239 ~~---~~l~~lL~yHiv~~--~~s~~~L~~~~g-----~~~Tla~~~~~~~~l~v~~~g~~V~l~~gv~~a~V~~~~i~~ 308 (418)
.. +.|+++|+||++++ +|+..+|...++ .++|+. +.+.+++.+.|+.++++.+.++++|+..|+.+
T Consensus 220 ~~~~~~~l~~iL~yHvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~----~~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~ 295 (324)
T 1o70_A 220 MADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFR----DSLSIRVEEEAGRYVIIWNYKKINVYRPDVEC 295 (324)
T ss_dssp SGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHSSSEEEECSS----SEEEEEEEEETTEEEEEETTEEEEEEEEEEEE
T ss_pred ccCcHHHHHHHHHhcEeCCcceEcHHHHhhhccCCCeeeeeccC----CcEEEEEEecCCEEEEEecCceeEEEEccccc
Confidence 32 58999999999998 888778874322 266664 35667766678899987766789999999999
Q ss_pred CCeEEEEeCccccCCcCC
Q 035767 309 TPLAIFTVDNVLLPTELF 326 (418)
Q Consensus 309 ~NGVVH~ID~VL~P~~l~ 326 (418)
+|||||+||+||+|++..
T Consensus 296 ~NGvIHvID~VL~P~~~~ 313 (324)
T 1o70_A 296 TNGIIHVIDYPLLEEKDV 313 (324)
T ss_dssp TTEEEEEESSCSCCTTTT
T ss_pred CCCeEEEeceeecCCccc
Confidence 999999999999999864
No 2
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.93 E-value=8.3e-27 Score=203.46 Aligned_cols=129 Identities=28% Similarity=0.437 Sum_probs=110.4
Q ss_pred ccHHHHHhhhh-HHHHHHHHHhcChHHHhhccCCCCeEEEecCcHHHhccCCCcccCC----CHHHHHHHhhccccCCCc
Q 035767 182 VNITALLEKAG-CKTFASLLVSSGVIKTFESAISKGLTVFAPSDEAFKAAGVPDLTKL----TNAEVVSLLQYHAANGYN 256 (418)
Q Consensus 182 ~~l~~~L~~~~-~S~f~~lL~~agl~~~l~~~~~~~~TvFAPtn~AF~~l~~~~l~~L----~~~~l~~lL~yHiv~~~~ 256 (418)
.+|.++|++.+ ||+|.++|+++|+.+.|+.. +++|||||+|+||++++...++.| ..+.|+++|+||++++.+
T Consensus 3 ~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~--~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~ 80 (137)
T 1w7d_A 3 GDIVETATGAGSFTTLLTAAEAAGLVDTLKGD--GPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEV 80 (137)
T ss_dssp STTGGGGGSCSSSTTTTHHHHHTTTHHHHTSS--SCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCC
T ss_pred CCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCC--CCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEE
Confidence 37889998777 99999999999999999876 679999999999999976666666 457899999999999999
Q ss_pred ccccccccCC-cceeeeccCCCceEEEEEecCCeEEEEeCCcceEEeeccccCCCeEEEEeCccccCCc
Q 035767 257 PVGTLKTTKG-SISTLATNGAGKFDLTVTTAGDSVTLHTGVDSSRLADTVLDSTPLAIFTVDNVLLPTE 324 (418)
Q Consensus 257 s~~~L~~~~g-~~~Tla~~~~~~~~l~v~~~g~~V~l~~gv~~a~V~~~~i~~~NGVVH~ID~VL~P~~ 324 (418)
+..+|. ++ .++|+.+ + .++|...+| ++ +++++|+..|+.++|||||+||+||+|+.
T Consensus 81 ~~~~l~--~~~~~~tl~G---~--~l~v~~~~g-v~----vn~a~v~~~di~~~NGvIHvID~VL~P~s 137 (137)
T 1w7d_A 81 MSSDLT--EGMTAETVEG---G--ALTVTLEGG-PK----VNGVSISQPDVDASNGVIHVIDGVLMPGA 137 (137)
T ss_dssp CTTTSC--SSEEEECTTS---C--EEEEECTTS-CE----ETTEECSBCCCBCSSSEEEBCSSCCSSCC
T ss_pred cHHHhc--CCCeeeccCC---c--eEEEEecCC-EE----EeCcEEEECCeecCCeEEEEECeeeCCCC
Confidence 888887 44 4666653 2 577777777 88 57899999999999999999999999973
No 3
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.92 E-value=1.6e-25 Score=194.03 Aligned_cols=128 Identities=23% Similarity=0.359 Sum_probs=106.6
Q ss_pred ccHHHHHhhhh-HHHHHHHHHhcChHHHhhccCCCCeEEEecCcHHHhccCCCcccCC--CHHHHHHHhhccccCCCccc
Q 035767 182 VNITALLEKAG-CKTFASLLVSSGVIKTFESAISKGLTVFAPSDEAFKAAGVPDLTKL--TNAEVVSLLQYHAANGYNPV 258 (418)
Q Consensus 182 ~~l~~~L~~~~-~S~f~~lL~~agl~~~l~~~~~~~~TvFAPtn~AF~~l~~~~l~~L--~~~~l~~lL~yHiv~~~~s~ 258 (418)
.+|.++|++.+ ||+|.++|+++|+.+.|++. +++|||||+|+||++++...++.| ..++|+++|+||++++.++.
T Consensus 2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~--~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~ 79 (132)
T 2vxp_A 2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNRE--GVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVS 79 (132)
T ss_dssp CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHSS--CCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCS
T ss_pred ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcCC--CCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeeh
Confidence 37999999877 99999999999999999976 679999999999999975444443 57889999999999998887
Q ss_pred ccccccCCcceeeeccCCCceEEEEEecCCeEEEEeCCcceEEeeccccCCCeEEEEeCcccc
Q 035767 259 GTLKTTKGSISTLATNGAGKFDLTVTTAGDSVTLHTGVDSSRLADTVLDSTPLAIFTVDNVLL 321 (418)
Q Consensus 259 ~~L~~~~g~~~Tla~~~~~~~~l~v~~~g~~V~l~~gv~~a~V~~~~i~~~NGVVH~ID~VL~ 321 (418)
+++.. ...++|+.+ + .++|..+++.++ +++++|+..|+.++|||||+||+||+
T Consensus 80 ~~l~~-~~~~~tl~G---~--~l~v~~~~~~v~----vn~a~v~~~di~a~NGvIHvID~VLl 132 (132)
T 2vxp_A 80 GGIGA-LVRLKSLQG---D--KLEVSLKNNVVS----VNKEPVAEPDIMATNGVVHVITNVLQ 132 (132)
T ss_dssp TTCSS-CEEEEBTTS---S--EEEEEEETTEEE----ESSCBEEEEEEEETTEEEEEESSCC-
T ss_pred hhccC-CceEecCCC---C--EEEEEEeCCEEE----EeccEEEEcceecCCEEEEEECcEeC
Confidence 77762 224667653 2 577777788888 47899999999999999999999985
No 4
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.91 E-value=1.3e-25 Score=201.59 Aligned_cols=128 Identities=23% Similarity=0.415 Sum_probs=109.8
Q ss_pred ccHHHHHhhhh-HHHHHHHHH-----hcChHHHhhccCCCCeEEEecCcHHHhccCCCcccCC--CHHHHHHHhhccccC
Q 035767 182 VNITALLEKAG-CKTFASLLV-----SSGVIKTFESAISKGLTVFAPSDEAFKAAGVPDLTKL--TNAEVVSLLQYHAAN 253 (418)
Q Consensus 182 ~~l~~~L~~~~-~S~f~~lL~-----~agl~~~l~~~~~~~~TvFAPtn~AF~~l~~~~l~~L--~~~~l~~lL~yHiv~ 253 (418)
.+|.++|++.+ ||+|.++|+ .+||.+.|+.. + +|||||+|+||++++...++.| ..+.|+++|+|||++
T Consensus 28 ~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~--g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~ 104 (163)
T 1nyo_A 28 DPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSG--Q-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVA 104 (163)
T ss_dssp SCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSS--S-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEE
T ss_pred cCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCC--C-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceEC
Confidence 58999999887 999999999 99999999875 5 9999999999999975455554 347899999999999
Q ss_pred CCcccccccccCCcceeeeccCCCceEEEEEecCCeEEEEeCCcceEEeeccccCCCeEEEEeCccccCCc
Q 035767 254 GYNPVGTLKTTKGSISTLATNGAGKFDLTVTTAGDSVTLHTGVDSSRLADTVLDSTPLAIFTVDNVLLPTE 324 (418)
Q Consensus 254 ~~~s~~~L~~~~g~~~Tla~~~~~~~~l~v~~~g~~V~l~~gv~~a~V~~~~i~~~NGVVH~ID~VL~P~~ 324 (418)
+.++..+|. |.++|+.+ . .|+|+..++.|+ +++++|+..|+.+.|||||+||+||+|+.
T Consensus 105 g~~~~~~l~---g~~~Tl~G---~--~l~v~~~~~~v~----vn~a~V~~~di~a~NGvIHvID~VL~P~~ 163 (163)
T 1nyo_A 105 GQTSPANVV---GTRQTLQG---A--SVTVTGQGNSLK----VGNADVVCGGVSTANATVYMIDSVLMPPA 163 (163)
T ss_dssp SCCCTTTSC---EEEECTTS---S--EEEEEECSSCEE----ETTEECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred CEEcHHHhC---CccccCCC---C--EEEEEEECCEEE----EeccEEEECceEcCCEEEEEECcEeCCCC
Confidence 999888885 56777753 2 577777788888 47799999999999999999999999973
No 5
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.86 E-value=1.8e-22 Score=175.90 Aligned_cols=126 Identities=14% Similarity=0.203 Sum_probs=104.5
Q ss_pred cccHHHHHhcCCCcHHHHHHHhhcchHHHHccCCcEEEEEcCChhhhhccCCC--------CHHHHHHHHhhccccCcCC
Q 035767 20 AHNITDILKDFPEYSQFNSYLTQTKLADEINSRQTITVLVLPNGAMSDLTAKH--------PLSVIKSALSLLVLLDYYD 91 (418)
Q Consensus 20 a~ni~~iL~~~~~~S~f~~~L~~t~L~~~L~~~~~~TvfAPtN~Af~~l~~~~--------~~~~l~~iL~yHil~g~~~ 91 (418)
..||.++|+++++||+|.++|+++||.+.|++.++||||||+|+||+++..+. +.+.++++|+|||+++.+.
T Consensus 2 ~~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~ 81 (137)
T 1w7d_A 2 TGDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVM 81 (137)
T ss_dssp CSTTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCC
T ss_pred CCCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEc
Confidence 36899999999999999999999999999999999999999999999986531 4688999999999999999
Q ss_pred ccccccccCCceeeeccccccCCCCCCCceEEEEEcCCCeEEEeeCCCCCccceEEeeeccccccccceee-ecccccCC
Q 035767 92 PQKLHQISKGTTLSTTLYQTTGNAPGNLGFVNITDLQGGKVGFGSAASGSKLDSTYTKSVKQIPYNVSVLE-ISSPIIAP 170 (418)
Q Consensus 92 ~~~L~~l~~g~~~~~Tl~~~~g~~~~~~g~v~it~~~~g~v~~~~~~~g~~~~a~vv~~v~di~~~ngVih-Id~vL~pp 170 (418)
..+| .++ ..++|+. +..+.++.. +| +.++ +++|++. |+.++||||| ||+||.||
T Consensus 82 ~~~l---~~~-~~~~tl~---------G~~l~v~~~-~g-v~vn--------~a~v~~~--di~~~NGvIHvID~VL~P~ 136 (137)
T 1w7d_A 82 SSDL---TEG-MTAETVE---------GGALTVTLE-GG-PKVN--------GVSISQP--DVDASNGVIHVIDGVLMPG 136 (137)
T ss_dssp TTTS---CSS-EEEECTT---------SCEEEEECT-TS-CEET--------TEECSBC--CCBCSSSEEEBCSSCCSSC
T ss_pred HHHh---cCC-CeeeccC---------CceEEEEec-CC-EEEe--------CcEEEEC--CeecCCeEEEEECeeeCCC
Confidence 8888 443 3345552 235777754 55 7763 2678888 9999999999 99999976
No 6
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.86 E-value=1.4e-21 Score=169.14 Aligned_cols=124 Identities=14% Similarity=0.152 Sum_probs=101.4
Q ss_pred ccHHHHHhcCCCcHHHHHHHhhcchHHHHccCCcEEEEEcCChhhhhccCC------CCHHHHHHHHhhccccCcCCccc
Q 035767 21 HNITDILKDFPEYSQFNSYLTQTKLADEINSRQTITVLVLPNGAMSDLTAK------HPLSVIKSALSLLVLLDYYDPQK 94 (418)
Q Consensus 21 ~ni~~iL~~~~~~S~f~~~L~~t~L~~~L~~~~~~TvfAPtN~Af~~l~~~------~~~~~l~~iL~yHil~g~~~~~~ 94 (418)
.+|.++|+++++||+|.++|+++||.+.|++.++||||||+|+||+++... .+.+.++++|+|||+++.+...+
T Consensus 2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~ 81 (132)
T 2vxp_A 2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGG 81 (132)
T ss_dssp CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTT
T ss_pred ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhh
Confidence 579999999999999999999999999999999999999999999998642 16889999999999999988777
Q ss_pred cccccCCceeeeccccccCCCCCCCceEEEEEcCCCeEEEeeCCCCCccceEEeeeccccccccceee-eccccc
Q 035767 95 LHQISKGTTLSTTLYQTTGNAPGNLGFVNITDLQGGKVGFGSAASGSKLDSTYTKSVKQIPYNVSVLE-ISSPII 168 (418)
Q Consensus 95 L~~l~~g~~~~~Tl~~~~g~~~~~~g~v~it~~~~g~v~~~~~~~g~~~~a~vv~~v~di~~~ngVih-Id~vL~ 168 (418)
+ .. ...++|+. +..+.++. .++.+.++. ++|++. |+.++||||| ||+||.
T Consensus 82 l---~~-~~~~~tl~---------G~~l~v~~-~~~~v~vn~--------a~v~~~--di~a~NGvIHvID~VLl 132 (132)
T 2vxp_A 82 I---GA-LVRLKSLQ---------GDKLEVSL-KNNVVSVNK--------EPVAEP--DIMATNGVVHVITNVLQ 132 (132)
T ss_dssp C---SS-CEEEEBTT---------SSEEEEEE-ETTEEEESS--------CBEEEE--EEEETTEEEEEESSCC-
T ss_pred c---cC-CceEecCC---------CCEEEEEE-eCCEEEEec--------cEEEEc--ceecCCEEEEEECcEeC
Confidence 6 33 23455652 23567765 356777742 568888 9999999999 999984
No 7
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.83 E-value=3.6e-21 Score=172.68 Aligned_cols=124 Identities=25% Similarity=0.332 Sum_probs=103.0
Q ss_pred cccHHHHHhcCCCcHHHHHHHh-----hcchHHHHccCCcEEEEEcCChhhhhccCC------CCHHHHHHHHhhccccC
Q 035767 20 AHNITDILKDFPEYSQFNSYLT-----QTKLADEINSRQTITVLVLPNGAMSDLTAK------HPLSVIKSALSLLVLLD 88 (418)
Q Consensus 20 a~ni~~iL~~~~~~S~f~~~L~-----~t~L~~~L~~~~~~TvfAPtN~Af~~l~~~------~~~~~l~~iL~yHil~g 88 (418)
..+|+++|+++++||+|.++|+ +++|.+.|++.+ ||||||+|+||+++... .+.+.|+++|+|||+++
T Consensus 27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g 105 (163)
T 1nyo_A 27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG 105 (163)
T ss_dssp HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEES
T ss_pred CcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECC
Confidence 3789999999999999999999 999999999988 99999999999998641 14578999999999999
Q ss_pred cCCccccccccCCceeeeccccccCCCCCCCceEEEEEcCCCeEEEeeCCCCCccceEEeeeccccccccceee-ecccc
Q 035767 89 YYDPQKLHQISKGTTLSTTLYQTTGNAPGNLGFVNITDLQGGKVGFGSAASGSKLDSTYTKSVKQIPYNVSVLE-ISSPI 167 (418)
Q Consensus 89 ~~~~~~L~~l~~g~~~~~Tl~~~~g~~~~~~g~v~it~~~~g~v~~~~~~~g~~~~a~vv~~v~di~~~ngVih-Id~vL 167 (418)
.+...+| . | .++|+. +..+.++.. +++++++ +++|++. |+.++||||| ||+||
T Consensus 106 ~~~~~~l---~-g--~~~Tl~---------G~~l~v~~~-~~~v~vn--------~a~V~~~--di~a~NGvIHvID~VL 159 (163)
T 1nyo_A 106 QTSPANV---V-G--TRQTLQ---------GASVTVTGQ-GNSLKVG--------NADVVCG--GVSTANATVYMIDSVL 159 (163)
T ss_dssp CCCTTTS---C-E--EEECTT---------SSEEEEEEC-SSCEEET--------TEECSSB--CCCCSSEEEBCBSSCC
T ss_pred EEcHHHh---C-C--ccccCC---------CCEEEEEEE-CCEEEEe--------ccEEEEC--ceEcCCEEEEEECcEe
Confidence 9998888 3 2 355552 235777764 5667773 2678888 9999999999 99999
Q ss_pred cCC
Q 035767 168 IAP 170 (418)
Q Consensus 168 ~pp 170 (418)
.||
T Consensus 160 ~P~ 162 (163)
T 1nyo_A 160 MPP 162 (163)
T ss_dssp CCC
T ss_pred CCC
Confidence 976
No 8
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.82 E-value=1.8e-20 Score=185.39 Aligned_cols=138 Identities=18% Similarity=0.325 Sum_probs=101.5
Q ss_pred ccHHHHHh------hhh-HHHHHHHHHhcC--hHHHhhccCCCCeEEEecCcHHHhccCCCcccCCCHHHHHHHhhcccc
Q 035767 182 VNITALLE------KAG-CKTFASLLVSSG--VIKTFESAISKGLTVFAPSDEAFKAAGVPDLTKLTNAEVVSLLQYHAA 252 (418)
Q Consensus 182 ~~l~~~L~------~~~-~S~f~~lL~~ag--l~~~l~~~~~~~~TvFAPtn~AF~~l~~~~l~~L~~~~l~~lL~yHiv 252 (418)
.||+++|+ +.+ ||+|.++|+++| |.+.|++. +++|||||+|+||.++....+. ...+.|+++|+|||+
T Consensus 6 ~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~--~~~TvFAPtn~Af~~~~~~~l~-~~~~~l~~iL~yHvv 82 (324)
T 1o70_A 6 TTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSL--TEVTILAPSNEAWNSSNINNVL-RDRNKMRQILNMHII 82 (324)
T ss_dssp -------------CCHHHHHHHHHHHHHTCSHHHHHHHTC--SSEEEEEECHHHHHHTCTHHHH-TCHHHHHHHHHHTEE
T ss_pred hhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCC--CCeEEEEEChHhhhcccHhhhh-CCHHHHHHHHHhcEe
Confidence 47888887 455 999999999999 99999976 7799999999999986422221 157889999999999
Q ss_pred CCCcccccccccCC----cceeeeccCCCceEEEEEec--CCeEEEEeCCcceEEeeccccCCCeEEEEeCccccCCc
Q 035767 253 NGYNPVGTLKTTKG----SISTLATNGAGKFDLTVTTA--GDSVTLHTGVDSSRLADTVLDSTPLAIFTVDNVLLPTE 324 (418)
Q Consensus 253 ~~~~s~~~L~~~~g----~~~Tla~~~~~~~~l~v~~~--g~~V~l~~gv~~a~V~~~~i~~~NGVVH~ID~VL~P~~ 324 (418)
+++++..+|....+ .++|+.+. ..+.+++... ++.+++.+|..+++|+..|+.++|||||+||+||+|+.
T Consensus 83 ~g~~~~~~l~~~~~~~~~~~~Tl~g~--~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~NGvIhvID~VL~pp~ 158 (324)
T 1o70_A 83 KDRLNVDKIRQKNANLIAQVPTVNNN--TFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGVPY 158 (324)
T ss_dssp SSCCCHHHHHHHTSSSCCCEEBSSTT--CEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCTTSCC
T ss_pred CCeecHHHHhhccCCCceEEEcCCCC--ceEEEEEeecCCceEEEEcCCceeEEEEeccccccCcEEEEEchhhhhch
Confidence 99998888874331 45676642 1245666632 34678766655799999999999999999999999864
No 9
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=16.19 E-value=7.3e+02 Score=23.94 Aligned_cols=10 Identities=0% Similarity=-0.130 Sum_probs=4.8
Q ss_pred HHHHHHHhhc
Q 035767 240 NAEVVSLLQY 249 (418)
Q Consensus 240 ~~~l~~lL~y 249 (418)
-.+|+..|..
T Consensus 30 V~~LK~~I~~ 39 (368)
T 1oqy_A 30 VKVLKEKIEA 39 (368)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555543
No 10
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=10.89 E-value=2e+02 Score=22.75 Aligned_cols=16 Identities=31% Similarity=0.470 Sum_probs=12.6
Q ss_pred cccCCCeEEEEeCccc
Q 035767 305 VLDSTPLAIFTVDNVL 320 (418)
Q Consensus 305 ~i~~~NGVVH~ID~VL 320 (418)
.+...+|+||-||.|.
T Consensus 68 ~IE~~GgvIHSIDEVv 83 (100)
T 3bpd_A 68 VIEDMGGVIHSVDEVV 83 (100)
T ss_dssp HHHTTTCEEEEEEEEE
T ss_pred HHHHcCCeEEeeeeee
Confidence 3456799999999874
Done!