BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035768
(388 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 151/284 (53%), Gaps = 29/284 (10%)
Query: 132 SLQKLTYDQIVAGTNKFCEENVIXXXXXXXXXXXXMPDGKTVAVKKLSQATGQG-DREFA 190
L++ + ++ ++ F +N++ + DG VAVK+L + QG + +F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 191 AEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAAS---LDWGKRCK 247
E+E + M H+NL+ L G+C E+LLVY YM GS+ LR + S LDW KR +
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 248 IV------------------------ASNILLNDDFEAKISDFGLARLISDCESHVSTVV 283
I A+NILL+++FEA + DFGLA+L+ + HV V
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 284 AGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTG-PEFEDKDGENLVDWVLHM 342
GTIG++ PEY TGK++E+ DV+ +GV+LLEL+TG++ + D L+DWV +
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 343 MKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
+K ++ + ++D + + +++Q+A C + P RP M
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 307
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 150/284 (52%), Gaps = 29/284 (10%)
Query: 132 SLQKLTYDQIVAGTNKFCEENVIXXXXXXXXXXXXMPDGKTVAVKKLSQATGQG-DREFA 190
L++ + ++ ++ F +N++ + DG VAVK+L + QG + +F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 191 AEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAAS---LDWGKRCK 247
E+E + M H+NL+ L G+C E+LLVY YM GS+ LR + S LDW KR +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 248 IV------------------------ASNILLNDDFEAKISDFGLARLISDCESHVSTVV 283
I A+NILL+++FEA + DFGLA+L+ + HV V
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 284 AGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTG-PEFEDKDGENLVDWVLHM 342
G IG++ PEY TGK++E+ DV+ +GV+LLEL+TG++ + D L+DWV +
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 343 MKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
+K ++ + ++D + + +++Q+A C + P RP M
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 26/268 (9%)
Query: 144 GTNKFCEENVIXXXXXXXXXXXXMPDGKTVAVKKLSQATGQGDREFAAEMETLGMVKHQN 203
TN F + +I + DG VA+K+ + + QG EF E+ETL +H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 204 LVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQ---AASLDWGKRCKIV----------- 249
LV L+G+C E +L+Y+YM G+L L S+ W +R +I
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 250 ----------ASNILLNDDFEAKISDFGLARLISDC-ESHVSTVVAGTIGYVPPEYGGTG 298
+ NILL+++F KI+DFG+++ ++ ++H+ VV GT+GY+ PEY G
Sbjct: 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKG 216
Query: 299 KATERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLN 358
+ TE+ DVYSFGV+L E++ + ++ NL +W + N Q ++++DP + +
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAEWAVESHNNGQLEQIVDPNLAD 275
Query: 359 ANSKPTMLKMLQIATGCISNDPTVRPTM 386
++ K A C++ RP+M
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 26/268 (9%)
Query: 144 GTNKFCEENVIXXXXXXXXXXXXMPDGKTVAVKKLSQATGQGDREFAAEMETLGMVKHQN 203
TN F + +I + DG VA+K+ + + QG EF E+ETL +H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 204 LVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQ---AASLDWGKRCKIV----------- 249
LV L+G+C E +L+Y+YM G+L L S+ W +R +I
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 250 ----------ASNILLNDDFEAKISDFGLARLISDC-ESHVSTVVAGTIGYVPPEYGGTG 298
+ NILL+++F KI+DFG+++ ++ ++H+ VV GT+GY+ PEY G
Sbjct: 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKG 216
Query: 299 KATERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLN 358
+ TE+ DVYSFGV+L E++ + ++ NL +W + N Q ++++DP + +
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAEWAVESHNNGQLEQIVDPNLAD 275
Query: 359 ANSKPTMLKMLQIATGCISNDPTVRPTM 386
++ K A C++ RP+M
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 96/179 (53%), Gaps = 35/179 (19%)
Query: 172 TVAVKKLSQ----ATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
TVAVKKL+ T + ++F E++ + +H+NLVELLG+ S ++ LVY YM G
Sbjct: 56 TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115
Query: 228 SLDDWLR--NQAASLDWGKRCKIV---------------------ASNILLNDDFEAKIS 264
SL D L + L W RCKI ++NILL++ F AKIS
Sbjct: 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKIS 175
Query: 265 DFGLARLISDCESHVSTV----VAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
DFGLAR E TV + GT Y+ PE G+ T + D+YSFGV+LLE++TG
Sbjct: 176 DFGLARA---SEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 96/179 (53%), Gaps = 35/179 (19%)
Query: 172 TVAVKKLSQ----ATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
TVAVKKL+ T + ++F E++ + +H+NLVELLG+ S ++ LVY YM G
Sbjct: 56 TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115
Query: 228 SLDDWLR--NQAASLDWGKRCKIV---------------------ASNILLNDDFEAKIS 264
SL D L + L W RCKI ++NILL++ F AKIS
Sbjct: 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKIS 175
Query: 265 DFGLARLISDCESHVSTV----VAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
DFGLAR E TV + GT Y+ PE G+ T + D+YSFGV+LLE++TG
Sbjct: 176 DFGLARA---SEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 94/176 (53%), Gaps = 29/176 (16%)
Query: 172 TVAVKKLSQ----ATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
TVAVKKL+ T + ++F E++ + +H+NLVELLG+ S ++ LVY YM G
Sbjct: 50 TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 109
Query: 228 SLDDWLR--NQAASLDWGKRCKIV---------------------ASNILLNDDFEAKIS 264
SL D L + L W RCKI ++NILL++ F AKIS
Sbjct: 110 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKIS 169
Query: 265 DFGLARLISDCESHVSTV-VAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
DFGLAR V + GT Y+ PE G+ T + D+YSFGV+LLE++TG
Sbjct: 170 DFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 92/176 (52%), Gaps = 29/176 (16%)
Query: 172 TVAVKKLSQ----ATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
TVAVKKL+ T + ++F E++ +H+NLVELLG+ S ++ LVY Y G
Sbjct: 47 TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNG 106
Query: 228 SLDDWLR--NQAASLDWGKRCKIV---------------------ASNILLNDDFEAKIS 264
SL D L + L W RCKI ++NILL++ F AKIS
Sbjct: 107 SLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKIS 166
Query: 265 DFGLARLISDCESHV-STVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
DFGLAR V + + GT Y PE G+ T + D+YSFGV+LLE++TG
Sbjct: 167 DFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 100 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDF 159
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + + G I + PE K + DV+SFGV+L EL T K
Sbjct: 160 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 219
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 220 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 269
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 270 WNNNVNQRPSF 280
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ A +D K CK + NIL+ ++ KI DF
Sbjct: 102 SLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 222 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 271
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 272 WNNNVNQRPSF 282
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 45 VAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 162 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 219 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 268
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 269 WNNNVNQRPSF 279
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 40 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 96
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 157 RLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216
Query: 325 PE 326
PE
Sbjct: 217 PE 218
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 35 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIXIVTEYMSKGSLLD 91
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 92 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 151
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 152 RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 45 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLLD 101
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 162 RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 98 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 157
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 158 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 217
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 218 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 267
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 268 WNNNVNQRPSF 278
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 219 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 268
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 269 WNNNVNQRPSF 279
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 45 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLLD 101
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 162 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 36 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 92
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 93 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 152
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 153 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 103 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 162
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 163 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 222
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 223 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 272
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 273 WNNNVNQRPSF 283
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 97 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 156
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 157 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 216
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 217 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 266
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 267 WNNNVNQRPSF 277
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 104 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 163
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 164 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 223
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 224 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 273
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 274 WNNNVNQRPSF 284
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 45 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 162 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + +KH LV+L Y V EE + +V EYM KGSL D
Sbjct: 36 VAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLD 92
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L++ AA + + +R + ++NIL+ + KI+DFGLA
Sbjct: 93 FLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLA 152
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RLI D E I + PE G+ T + DV+SFG++L ELVT + P
Sbjct: 153 RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG--- 209
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
M N + E ++ + + + ++ C DP RPT
Sbjct: 210 -------------MNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 253
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 211 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 267
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 328 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 45 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLA 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 162 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 38 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 94
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 95 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 154
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 155 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 34 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 90
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 91 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 150
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 151 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 219 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 268
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 269 WNNNVNQRPSF 279
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 211 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 267
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 328 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 236
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 237 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 286
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 287 WNNNVNQRPSF 297
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 294 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 350
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 351 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 410
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 411 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 105 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 164
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 165 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 224
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 225 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 274
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 275 WNNNVNQRPSF 285
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 130 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 189
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 190 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 249
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 250 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 299
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 300 WNNNVNQRPSF 310
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 102 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 222 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 271
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 272 WNNNVNQRPSF 282
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 106 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 165
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 166 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 225
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 226 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 275
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 276 WNNNVNQRPSF 286
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 49 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 105
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 106 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 165
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 166 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 225
Query: 325 PE 326
PE
Sbjct: 226 PE 227
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 42 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 98
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 99 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 159 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 218
Query: 325 PE 326
PE
Sbjct: 219 PE 220
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 36 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 92
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 93 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLA 152
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 153 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 212
Query: 325 PE 326
PE
Sbjct: 213 PE 214
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ EY+ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL D+L+ +D K CK + NIL+ ++ KI DF
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 236
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 237 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 286
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 287 WNNNVNQRPSF 297
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 41 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 97
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 98 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 157
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 158 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 217
Query: 325 PE 326
PE
Sbjct: 218 PE 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 40 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 96
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 157 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216
Query: 325 PE 326
PE
Sbjct: 217 PE 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 91/182 (50%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 46 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 102
Query: 232 WLR-------------NQAASLDWG-----KRCKI----VASNILLNDDFEAKISDFGLA 269
+L+ + AA + G +R I A+NIL++D KI+DFGLA
Sbjct: 103 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 163 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 222
Query: 325 PE 326
PE
Sbjct: 223 PE 224
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 45 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVCEYMSKGSLLD 101
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 162 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 46 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 102
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 103 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 163 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 222
Query: 325 PE 326
PE
Sbjct: 223 PE 224
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 40 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 96
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 157 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216
Query: 325 PE 326
PE
Sbjct: 217 PE 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 45 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 101
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 102 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 162 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 221
Query: 325 PE 326
PE
Sbjct: 222 PE 223
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 42 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKGSLLD 98
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 159 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 35 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 91
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 92 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 151
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 152 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 211
Query: 325 PE 326
PE
Sbjct: 212 PE 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 91/182 (50%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 48 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 104
Query: 232 WLR-------------NQAASLDWG-----KRCKI----VASNILLNDDFEAKISDFGLA 269
+L+ + AA + G +R I A+NIL++D KI+DFGLA
Sbjct: 105 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 164
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 165 RLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 224
Query: 325 PE 326
PE
Sbjct: 225 PE 226
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 211 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVGEYMSKGSLLD 267
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 328 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 91/182 (50%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 50 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 106
Query: 232 WLR-------------NQAASLDWG-----KRCKI----VASNILLNDDFEAKISDFGLA 269
+L+ + AA + G +R I A+NIL++D KI+DFGLA
Sbjct: 107 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 166
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 167 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 226
Query: 325 PE 326
PE
Sbjct: 227 PE 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VAVK L Q + D F AE + ++HQ LV L Y V +E + ++ EYM GSL D
Sbjct: 40 VAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVD 96
Query: 232 WLR-------------NQAASLDWGKRC---------KIVASNILLNDDFEAKISDFGLA 269
+L+ + AA + G + A+NIL++D KI+DFGLA
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP----TG 324
RLI D E I + PE G T + DV+SFG++L E+VT G+ P T
Sbjct: 157 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216
Query: 325 PE 326
PE
Sbjct: 217 PE 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 42 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKGSLLD 98
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 159 RLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KG L D
Sbjct: 45 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVMEYMSKGCLLD 101
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 162 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L T F E + + ++H+ LV+L Y V EE + +V EYM KG L D
Sbjct: 45 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGCLLD 101
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGLA
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 162 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGLA
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 44/244 (18%)
Query: 170 GKTVAVKKLSQATGQGDR--EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
G VAVK L + +R EF E+ + ++H N+V +G + +V EY+ +G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 228 SLDDWLRNQAA--SLDWGKRCKIV-----------------------ASNILLNDDFEAK 262
SL L A LD +R + + N+L++ + K
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVK 179
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ DFGL+RL + S AGT ++ PE + E+ DVYSFGVIL EL T +QP
Sbjct: 180 VCDFGLSRLKA-SXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
Query: 323 TGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTV 382
G + + +V V K + L+P V I GC +N+P
Sbjct: 239 WG----NLNPAQVVAAVGFKCKRLEIPRNLNPQV------------AAIIEGCWTNEPWK 282
Query: 383 RPTM 386
RP+
Sbjct: 283 RPSF 286
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 44/251 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-SVDEEKL-LVYEYMVKG 227
G+ VAVKKL +T + R+F E+E L ++H N+V+ G C S L L+ E++ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 228 SLDDWLRNQAASLDWGKR-------CK--------------IVASNILLNDDFEAKISDF 266
SL ++L+ +D K CK + NIL+ ++ KI DF
Sbjct: 102 SLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT----GK 320
GL +++ + G I + PE K + DV+SFGV+L EL T K
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 321 QPTGPEF-----EDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
P EF DK G+ +V ++ ++KN + + + P + M I T C
Sbjct: 222 SPPA-EFMRMIGNDKQGQMIVFHLIELLKN-------NGRLPRPDGCPDEIYM--IMTEC 271
Query: 376 ISNDPTVRPTM 386
+N+ RP+
Sbjct: 272 WNNNVNQRPSF 282
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 39/192 (20%)
Query: 169 DGKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
D VAVK L +A+ ++F E E L M++HQ++V G C+ L+V+EYM G
Sbjct: 47 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 106
Query: 229 LDDWLRNQA------------------------------------ASLDWGKRCKIVASN 252
L+ +LR+ A L + R + N
Sbjct: 107 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR-DLATRN 165
Query: 253 ILLNDDFEAKISDFGLARLISDCESH-VSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
L+ KI DFG++R I + + V I ++PPE K T DV+SFGV
Sbjct: 166 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 225
Query: 312 ILLELVT-GKQP 322
+L E+ T GKQP
Sbjct: 226 VLWEIFTYGKQP 237
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 44/244 (18%)
Query: 170 GKTVAVKKLSQATGQGDR--EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
G VAVK L + +R EF E+ + ++H N+V +G + +V EY+ +G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 228 SLDDWLRNQAA--SLDWGKRCKIV-----------------------ASNILLNDDFEAK 262
SL L A LD +R + + N+L++ + K
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVK 179
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ DFGL+RL + S AGT ++ PE + E+ DVYSFGVIL EL T +QP
Sbjct: 180 VCDFGLSRLKASTFLS-SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
Query: 323 TGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTV 382
G + + +V V K + L+P V I GC +N+P
Sbjct: 239 WG----NLNPAQVVAAVGFKCKRLEIPRNLNPQV------------AAIIEGCWTNEPWK 282
Query: 383 RPTM 386
RP+
Sbjct: 283 RPSF 286
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 39/192 (20%)
Query: 169 DGKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
D VAVK L +A+ ++F E E L M++HQ++V G C+ L+V+EYM G
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 100
Query: 229 LDDWLRNQA------------------------------------ASLDWGKRCKIVASN 252
L+ +LR+ A L + R + N
Sbjct: 101 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR-DLATRN 159
Query: 253 ILLNDDFEAKISDFGLARLISDCESH-VSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
L+ KI DFG++R I + + V I ++PPE K T DV+SFGV
Sbjct: 160 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 219
Query: 312 ILLELVT-GKQP 322
+L E+ T GKQP
Sbjct: 220 VLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 39/192 (20%)
Query: 169 DGKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
D VAVK L +A+ ++F E E L M++HQ++V G C+ L+V+EYM G
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 129
Query: 229 LDDWLRNQA------------------------------------ASLDWGKRCKIVASN 252
L+ +LR+ A L + R + N
Sbjct: 130 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHR-DLATRN 188
Query: 253 ILLNDDFEAKISDFGLARLISDCESH-VSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
L+ KI DFG++R I + + V I ++PPE K T DV+SFGV
Sbjct: 189 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248
Query: 312 ILLELVT-GKQP 322
+L E+ T GKQP
Sbjct: 249 VLWEIFTYGKQP 260
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 27/174 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSLDD 231
VA+K L F E + + ++H+ LV+L Y V EE + +V EYM KGSL D
Sbjct: 212 VAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 268
Query: 232 WLRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+L+ + A+ + + +R V A+NIL+ ++ K++DFGL
Sbjct: 269 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLG 328
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RLI D E I + PE G+ T + DV+SFG++L EL T G+ P
Sbjct: 329 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 73 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 133 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 193 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 63 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 123 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 183 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 106 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 166 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 27/176 (15%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L + R +F E +G H N++ L G S + +++ EYM G+LD
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 232 WLRNQ----------------------AASLDWGKRCKIVASNILLNDDFEAKISDFGLA 269
+LR + A++++ R + A NIL+N + K+SDFGL+
Sbjct: 136 FLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR-DLAARNILVNSNLVCKVSDFGLS 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+SFG+++ E++T G++P
Sbjct: 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 112/252 (44%), Gaps = 31/252 (12%)
Query: 111 SDRSSSALMEHLSINLAMFEPSLQKLTYDQIVAGTNKFCEEN-VIXXXXXXXXXXXXM-- 167
SD SS L + I+L+ P L + ++ ++ N VI +
Sbjct: 12 SDISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLD 71
Query: 168 PDGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEY 223
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V Y
Sbjct: 72 NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 131
Query: 224 MVKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAK 262
M G L +++RN+ + L K K +AS N +L++ F K
Sbjct: 132 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVK 191
Query: 263 ISDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
++DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 192 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 251
Query: 320 KQPTGPEFEDKD 331
P P+ D
Sbjct: 252 GAPPYPDVNTFD 263
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VAVK L T + F E + ++H LV L + +E ++ EYM KGSL D+
Sbjct: 40 VAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDF 98
Query: 233 LRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
L++ A + + +R + A+N+L+++ KI+DFGLAR
Sbjct: 99 LKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 158
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+I D E I + PE G T + DV+SFG++L E+VT GK P
Sbjct: 159 VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V E M GSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V E M GSLD
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 38 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 96
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 157 RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP 216
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 217 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 257
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+VA+K L T + R+F E +G H N++ L G + + ++V E M GSLD
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 231 DWLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR A D G + + A NIL+N + K+SDFGL+
Sbjct: 106 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G++L E+++ G++P
Sbjct: 166 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 60 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 119
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 120 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV 179
Query: 264 SDFGLARLISDCE---SHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 180 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 239
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 240 APPYPDVNTFD 250
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 115 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV 174
Query: 264 SDFGLARLISDCE---SHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 235 APPYPDVNTFD 245
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 113 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV 172
Query: 264 SDFGLARLISDCE---SHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 173 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 232
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 233 APPYPDVNTFD 243
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 74 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 133
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 134 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 193
Query: 264 SDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 194 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 253
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 254 APPYPDVNTFD 264
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 114 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 173
Query: 264 SDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 174 ADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 234 APPYPDVNTFD 244
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 56 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 116 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV 175
Query: 264 SDFGLARLISDCE---SHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 176 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 235
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 236 APPYPDVNTFD 246
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 115 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV 174
Query: 264 SDFGLARLISDCE---SHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 235 APPYPDVNTFD 245
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 115 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 174
Query: 264 SDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 175 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 235 APPYPDVNTFD 245
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 114 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 174 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV 233
Query: 264 SDFGLARLISDCE---SHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 293
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 294 APPYPDVNTFD 304
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 115 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 174
Query: 264 SDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 175 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 235 APPYPDVNTFD 245
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 38 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 157 RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP 216
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 217 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 257
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 173 VAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L T + R+F E +G H N++ L G + + ++V EYM GSLD
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 232 WLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLAR 270
+L+ D G + + A NIL+N + K+SDFGL+R
Sbjct: 113 FLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 172
Query: 271 LISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
++ D T G I + PE K T DV+S+G+++ E+V+ G++P
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 114 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 173
Query: 264 SDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 174 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 234 APPYPDVNTFD 244
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 52 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 171
Query: 264 SDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 172 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 231
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 232 APPYPDVNTFD 242
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 56 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 116 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV 175
Query: 264 SDFGLARLISDCE---SHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 176 ADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 235
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 236 APPYPDVNTFD 246
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 47 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 106
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 107 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 166
Query: 264 SDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 167 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 226
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 227 APPYPDVNTFD 237
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 45 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 103
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 164 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 223
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 224 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 41 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 99
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 100 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 159
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 160 RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 219
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 220 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 260
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 113 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 172
Query: 264 SDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 173 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 232
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 233 APPYPDVNTFD 243
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + D EF E + + + H+ LV+L G C+ ++ EYM G L ++
Sbjct: 31 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 89
Query: 233 LR---NQAASLDWGKRCK------------------IVASNILLNDDFEAKISDFGLARL 271
LR ++ + + CK + A N L+ND K+SDFGL+R
Sbjct: 90 LREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 149
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+ D E S + + PPE K + + D+++FGV++ E+ + GK P
Sbjct: 150 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 169 DGKTV--AVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDE-EKLLVYEYM 224
DGK + AVK L++ T G+ +F E + H N++ LLG C E L+V YM
Sbjct: 50 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109
Query: 225 VKGSLDDWLRNQAAS----------LDWGKRCKIVAS-----------NILLNDDFEAKI 263
G L +++RN+ + L K K +AS N +L++ F K+
Sbjct: 110 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 169
Query: 264 SDFGLARLISDCES---HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
+DFGLAR + D E H T + ++ E T K T + DV+SFGV+L EL+T
Sbjct: 170 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 229
Query: 321 QPTGPEFEDKD 331
P P+ D
Sbjct: 230 APPYPDVNTFD 240
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + D EF E + + + H+ LV+L G C+ ++ EYM G L ++
Sbjct: 51 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 233 LR---NQAASLDWGKRCK------------------IVASNILLNDDFEAKISDFGLARL 271
LR ++ + + CK + A N L+ND K+SDFGL+R
Sbjct: 110 LREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 169
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+ D E S + + PPE K + + D+++FGV++ E+ + GK P
Sbjct: 170 VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + D EF E + + + H+ LV+L G C+ ++ EYM G L ++
Sbjct: 35 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 93
Query: 233 LR---NQAASLDWGKRCK------------------IVASNILLNDDFEAKISDFGLARL 271
LR ++ + + CK + A N L+ND K+SDFGL+R
Sbjct: 94 LREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 153
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+ D E S + + PPE K + + D+++FGV++ E+ + GK P
Sbjct: 154 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 45 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 164 RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 223
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 224 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 264
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 25/176 (14%)
Query: 172 TVAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K L T + R+F E +G H N+V L G + + ++V E+M G+LD
Sbjct: 73 AVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALD 132
Query: 231 DWLRNQ----------------AASL----DWGKRCK-IVASNILLNDDFEAKISDFGLA 269
+LR AA + D G + + A NIL+N + K+SDFGL+
Sbjct: 133 AFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R+I D V T G I + PE K T DV+S+G+++ E+++ G++P
Sbjct: 193 RVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 38 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 157 RLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP 216
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 217 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 257
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 45 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 164 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 223
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 224 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 40 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 99 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 219 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 259
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + D EF E + + + H+ LV+L G C+ ++ EYM G L ++
Sbjct: 36 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 233 LR---NQAASLDWGKRCK------------------IVASNILLNDDFEAKISDFGLARL 271
LR ++ + + CK + A N L+ND K+SDFGL+R
Sbjct: 95 LREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 154
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+ D E S + + PPE K + + D+++FGV++ E+ + GK P
Sbjct: 155 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 40 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 219 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 259
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 44 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 102
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 103 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 162
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 163 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 222
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 223 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 263
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 40 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 99 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 219 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 259
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + D EF E + + + H+ LV+L G C+ ++ EYM G L ++
Sbjct: 51 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 233 LR---NQAASLDWGKRCK------------------IVASNILLNDDFEAKISDFGLARL 271
LR ++ + + CK + A N L+ND K+SDFGL+R
Sbjct: 110 LREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 169
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+ D E S + + PPE K + + D+++FGV++ E+ + GK P
Sbjct: 170 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 40 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 219 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 259
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 53 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 111
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 112 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 171
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 172 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 231
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 232 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 272
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 247 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 305
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 306 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 365
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 425
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 426 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 466
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 41 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 99
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 100 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 159
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 160 RLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 219
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 220 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 40 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 219 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 259
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + D EF E + + + H+ LV+L G C+ ++ EYM G L ++
Sbjct: 36 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 233 LR---NQAASLDWGKRCK------------------IVASNILLNDDFEAKISDFGLARL 271
LR ++ + + CK + A N L+ND K+SDFGL+R
Sbjct: 95 LREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 154
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+ D E S + + PPE K + + D+++FGV++ E+ + GK P
Sbjct: 155 VLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 286 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 344
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 345 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 404
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 405 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 464
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 465 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 505
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 42 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 161 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 220
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 221 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 261
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 42 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 161 RLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 220
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 221 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 261
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 40 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 218
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 219 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 259
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + D EF E + + + H+ LV+L G C+ ++ EYM G L ++
Sbjct: 42 VAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 100
Query: 233 LR---NQAASLDWGKRCK------------------IVASNILLNDDFEAKISDFGLARL 271
LR ++ + + CK + A N L+ND K+SDFGL+R
Sbjct: 101 LREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 160
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+ D E S + + PPE K + + D+++FGV++ E+ + GK P
Sbjct: 161 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 45 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 164 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 223
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 224 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 264
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 24/174 (13%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+++ +V EYM G+L D
Sbjct: 59 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLD 117
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 118 YLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLS 177
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
RL++ I + PE + + DV++FGV+L E+ T G P
Sbjct: 178 RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 45 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 104 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 164 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 223
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 224 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 42 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 161 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 220
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 221 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 261
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 172 TVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
TVAVK L + T + + EF E + +KH NLV+LLG C+ + ++ E+M G+L D
Sbjct: 244 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 302
Query: 232 WLR-----------------NQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
+LR ++++++ ++ + A N L+ ++ K++DFGL+
Sbjct: 303 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS 362
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
RL++ I + PE K + + DV++FGV+L E+ T P +
Sbjct: 363 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 422
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
L++ M + E E K+ ++ C +P+ RP+
Sbjct: 423 SQVYELLEKDYRMERPEGCPE----------------KVYELMRACWQWNPSDRPSF 463
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 108/235 (45%), Gaps = 50/235 (21%)
Query: 170 GKTVAVKKL-SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEK---LLVYEYMV 225
G VAVK + + AT Q F AE + ++H NLV+LLG + EEK +V EYM
Sbjct: 216 GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLG--VIVEEKGGLYIVTEYMA 270
Query: 226 KGSLDDWLRNQAASLDWGKRC-----------------------KIVASNILLNDDFEAK 262
KGSL D+LR++ S+ G C + A N+L+++D AK
Sbjct: 271 KGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK 329
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+SDFGL + S + V T PE K + + DV+SFG++L E+ + +
Sbjct: 330 VSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGRV 385
Query: 323 TGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAV---------LNANSKPTMLKM 368
P KD V+ M A + PAV L+A ++PT L++
Sbjct: 386 PYPRIPLKDVVPRVEKGYKM----DAPDGCPPAVYDVMKNCWHLDAATRPTFLQL 436
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VAVK + + + F AE + ++H LV+L + E ++ E+M KGSL D+
Sbjct: 42 VAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDF 99
Query: 233 LRNQAAS-------LDWGKRCK---------------IVASNILLNDDFEAKISDFGLAR 270
L++ S +D+ + + A+NIL++ KI+DFGLAR
Sbjct: 100 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 159
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDK 330
+I D E I + PE G T + DV+SFG++L+E+VT + P +
Sbjct: 160 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 219
Query: 331 DGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
+ ++ M + E E ++ I C N P RPT
Sbjct: 220 EVIRALERGYRMPRPENCPE----------------ELYNIMMRCWKNRPEERPTF 259
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VAVK L T + F E + ++H LV L + +E ++ E+M KGSL D+
Sbjct: 39 VAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDF 97
Query: 233 LRNQ-----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
L++ A + + +R + A+N+L+++ KI+DFGLAR
Sbjct: 98 LKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR 157
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+I D E I + PE G T + +V+SFG++L E+VT GK P
Sbjct: 158 VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 31/179 (17%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L S T + R+F +E +G H N++ L G + +++ E+M GSLD
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 232 WLRNQ----------------------AASLDWGKRCKIVASNILLNDDFEAKISDFGLA 269
+LR A +++ R + A NIL+N + K+SDFGL+
Sbjct: 98 FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRA-LAARNILVNSNLVCKVSDFGLS 156
Query: 270 RLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R + D S T + G +P PE K T DV+S+G+++ E+++ G++P
Sbjct: 157 RFLEDDTSD-PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + D +F E E + + H LV+L G C LV+E+M G L D+
Sbjct: 54 VAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 233 LRNQ----AASLDWG-------------KRCKI----VASNILLNDDFEAKISDFGLARL 271
LR Q AA G + C I A N L+ ++ K+SDFG+ R
Sbjct: 113 LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 172
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFEDK 330
+ D + ST + + PE + + + DV+SFGV++ E+ + GK P +E++
Sbjct: 173 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENR 228
Query: 331 DGENLVD 337
+V+
Sbjct: 229 SNSEVVE 235
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + +F E E + + H LV+L G C LV+E+M G L D+
Sbjct: 32 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 233 LRNQ----AASLDWG-------------KRCKI----VASNILLNDDFEAKISDFGLARL 271
LR Q AA G + C I A N L+ ++ K+SDFG+ R
Sbjct: 91 LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFEDK 330
+ D + ST + + PE + + + DV+SFGV++ E+ + GK P +E++
Sbjct: 151 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENR 206
Query: 331 DGENLVD 337
+V+
Sbjct: 207 SNSEVVE 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VAVK + + + F AE + ++H LV+L + E ++ E+M KGSL D+
Sbjct: 215 VAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDF 272
Query: 233 LRNQAAS-------LDWGKRCK---------------IVASNILLNDDFEAKISDFGLAR 270
L++ S +D+ + + A+NIL++ KI+DFGLAR
Sbjct: 273 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 332
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDK 330
+I D E I + PE G T + DV+SFG++L+E+VT + P +
Sbjct: 333 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 392
Query: 331 DGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
+ ++ M + E E ++ I C N P RPT
Sbjct: 393 EVIRALERGYRMPRPENCPE----------------ELYNIMMRCWKNRPEERPTF 432
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Query: 173 VAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L T + R+F +E +G H N++ L G + + +++ EYM GSLD
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 232 WLRNQ----------------------AASLDWGKRCKIVASNILLNDDFEAKISDFGLA 269
+LR + + + R + A NIL+N + K+SDFG++
Sbjct: 105 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHR-DLAARNILVNSNLVCKVSDFGMS 163
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G+++ E+++ G++P
Sbjct: 164 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Query: 173 VAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L T + R+F +E +G H N++ L G + + +++ EYM GSLD
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 232 WLRNQ----------------------AASLDWGKRCKIVASNILLNDDFEAKISDFGLA 269
+LR + + + R + A NIL+N + K+SDFG++
Sbjct: 99 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHR-DLAARNILVNSNLVCKVSDFGMS 157
Query: 270 RLISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R++ D T G I + PE K T DV+S+G+++ E+++ G++P
Sbjct: 158 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 31/179 (17%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L S T + R+F +E +G H N++ L G + +++ E+M GSLD
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 232 WLRNQ----------------------AASLDWGKRCKIVASNILLNDDFEAKISDFGLA 269
+LR A +++ R + A NIL+N + K+SDFGL+
Sbjct: 124 FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHR-DLAARNILVNSNLVCKVSDFGLS 182
Query: 270 RLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R + D S T + G +P PE K T DV+S+G+++ E+++ G++P
Sbjct: 183 RFLEDDTSD-PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + +F E E + + H LV+L G C LV+E+M G L D+
Sbjct: 34 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 233 LRNQ----AASLDWG-------------KRCKI----VASNILLNDDFEAKISDFGLARL 271
LR Q AA G + C I A N L+ ++ K+SDFG+ R
Sbjct: 93 LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFEDK 330
+ D + ST + + PE + + + DV+SFGV++ E+ + GK P +E++
Sbjct: 153 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENR 208
Query: 331 DGENLVD 337
+V+
Sbjct: 209 SNSEVVE 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + +F E E + + H LV+L G C LV+E+M G L D+
Sbjct: 37 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 233 LRNQ----AASLDWG-------------KRCKI----VASNILLNDDFEAKISDFGLARL 271
LR Q AA G + C I A N L+ ++ K+SDFG+ R
Sbjct: 96 LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFEDK 330
+ D + ST + + PE + + + DV+SFGV++ E+ + GK P +E++
Sbjct: 156 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENR 211
Query: 331 DGENLVD 337
+V+
Sbjct: 212 SNSEVVE 218
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 37/189 (19%)
Query: 170 GKTVAVKKL-SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEK---LLVYEYMV 225
G VAVK + + AT Q F AE + ++H NLV+LLG + EEK +V EYM
Sbjct: 29 GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV--IVEEKGGLYIVTEYMA 83
Query: 226 KGSLDDWLRNQAASLDWGKRC-----------------------KIVASNILLNDDFEAK 262
KGSL D+LR++ S+ G C + A N+L+++D AK
Sbjct: 84 KGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK 142
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+SDFGL + S + V T PE K + + DV+SFG++L E+ + +
Sbjct: 143 VSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 323 TGPEFEDKD 331
P KD
Sbjct: 199 PYPRIPLKD 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 173 VAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L T + R+F +E +G H N++ L G + + +++ EYM GSLD
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 232 WLRNQAASLD----------WGKRCK-----------IVASNILLNDDFEAKISDFGLAR 270
+LR G K + A NIL+N + K+SDFG++R
Sbjct: 120 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 271 LISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
++ D T G I + PE K T DV+S+G+++ E+++ G++P
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 25/175 (14%)
Query: 173 VAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L T + R+F +E +G H N++ L G + ++V EYM GSLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 232 WLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLAR 270
+LR D G + + A N+L++ + K+SDFGL+R
Sbjct: 140 FLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 271 LISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQP 322
++ D T G I + PE + DV+SFGV++ E L G++P
Sbjct: 200 VLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 25/175 (14%)
Query: 173 VAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L T + R+F +E +G H N++ L G + ++V EYM GSLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 232 WLRNQAASL--------------------DWGKRCK-IVASNILLNDDFEAKISDFGLAR 270
+LR D G + + A N+L++ + K+SDFGL+R
Sbjct: 140 FLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
Query: 271 LISDCESHVSTVVAGTIG--YVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQP 322
++ D T G I + PE + DV+SFGV++ E L G++P
Sbjct: 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 37/189 (19%)
Query: 170 GKTVAVKKL-SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEK---LLVYEYMV 225
G VAVK + + AT Q F AE + ++H NLV+LLG + EEK +V EYM
Sbjct: 44 GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV--IVEEKGGLYIVTEYMA 98
Query: 226 KGSLDDWLRNQAASLDWGKRC-----------------------KIVASNILLNDDFEAK 262
KGSL D+LR++ S+ G C + A N+L+++D AK
Sbjct: 99 KGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK 157
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+SDFGL + S + V T PE K + + DV+SFG++L E+ + +
Sbjct: 158 VSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGRV 213
Query: 323 TGPEFEDKD 331
P KD
Sbjct: 214 PYPRIPLKD 222
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + +F E E + + H LV+L G C LV+E+M G L D+
Sbjct: 34 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 233 LRNQ----AASLDWG---KRCK--------------IVASNILLNDDFEAKISDFGLARL 271
LR Q AA G C+ + A N L+ ++ K+SDFG+ R
Sbjct: 93 LRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFEDK 330
+ D + ST + + PE + + + DV+SFGV++ E+ + GK P +E++
Sbjct: 153 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENR 208
Query: 331 DGENLVD 337
+V+
Sbjct: 209 SNSEVVE 215
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 37/190 (19%)
Query: 169 DGKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
D VAVK L A+ ++F E E L ++H+++V+ G C + ++V+EYM G
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 229 LDDWLRNQA----------------------------------ASLDWGKRCKIVASNIL 254
L+ +LR AS + R + N L
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHR-DLATRNCL 160
Query: 255 LNDDFEAKISDFGLARLISDCESH-VSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVIL 313
+ ++ KI DFG++R + + + V I ++PPE K T DV+S GV+L
Sbjct: 161 VGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 220
Query: 314 LELVT-GKQP 322
E+ T GKQP
Sbjct: 221 WEIFTYGKQP 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 40/193 (20%)
Query: 169 DGKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
D VAVK L T ++F E E L ++H+++V+ G C + ++V+EYM G
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 229 LDDWLRNQA-------------------------------------ASLDWGKRCKIVAS 251
L+ +LR AS + R +
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHR-DLATR 162
Query: 252 NILLNDDFEAKISDFGLARLISDCESH-VSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
N L+ + KI DFG++R + + + V I ++PPE K T DV+SFG
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG 222
Query: 311 VILLELVT-GKQP 322
VIL E+ T GKQP
Sbjct: 223 VILWEIFTYGKQP 235
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L S AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 231 DWLR------------------NQAASLDW---------------GKRC---KIVASNIL 254
++L+ Q +S D K+C + A N+L
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 167
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVIL 313
+ +D KI+DFGLAR I + + T + ++ PE T + DV+SFGV+L
Sbjct: 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 227
Query: 314 LELVT 318
E+ T
Sbjct: 228 WEIFT 232
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 89/189 (47%), Gaps = 37/189 (19%)
Query: 170 GKTVAVKKL-SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEK---LLVYEYMV 225
G VAVK + + AT Q F AE + ++H NLV+LLG + EEK +V EYM
Sbjct: 35 GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV--IVEEKGGLYIVTEYMA 89
Query: 226 KGSLDDWLRNQAASLDWGKRC-----------------------KIVASNILLNDDFEAK 262
KGSL D+LR++ S+ G C + A N+L+++D AK
Sbjct: 90 KGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK 148
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+SDFGL + S + V T PE + + DV+SFG++L E+ + +
Sbjct: 149 VSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKSDVWSFGILLWEIYSFGRV 204
Query: 323 TGPEFEDKD 331
P KD
Sbjct: 205 PYPRIPLKD 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VAVK + + + D EF E +T+ + H LV+ G CS + +V EY+ G L ++
Sbjct: 35 VAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93
Query: 233 LRNQAASLDWGKRCK---------------------IVASNILLNDDFEAKISDFGLARL 271
LR+ L+ + + + A N L++ D K+SDFG+ R
Sbjct: 94 LRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRY 153
Query: 272 ISDCESHVSTV-VAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFED 329
+ D + +VS+V + + PE K + + DV++FG+++ E+ + GK P ++
Sbjct: 154 VLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP----YDL 208
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
+V +K Q + P + + + QI C P RPT
Sbjct: 209 YTNSEVV------LKVSQGHRLYRPHLASDT-------IYQIMYSCWHELPEKRPTF 252
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 47/189 (24%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L S AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 231 DWLR------------------NQAASLDW---------------GKRC---KIVASNIL 254
++L+ Q +S D K+C + A N+L
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSF 309
+ +D KI+DFGLAR I H+ T G +P PE T + DV+SF
Sbjct: 183 VTEDNVMKIADFGLARDI----HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 310 GVILLELVT 318
GV+L E+ T
Sbjct: 239 GVLLWEIFT 247
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VA+K + + + +F E E + + H LV+L G C LV E+M G L D+
Sbjct: 35 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 233 LRNQ----AASLDWG-------------KRCKI----VASNILLNDDFEAKISDFGLARL 271
LR Q AA G + C I A N L+ ++ K+SDFG+ R
Sbjct: 94 LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFEDK 330
+ D + ST + + PE + + + DV+SFGV++ E+ + GK P +E++
Sbjct: 154 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENR 209
Query: 331 DGENLVD 337
+V+
Sbjct: 210 SNSEVVE 216
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L S AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 231 DWLR------------------NQAASLDW---------------GKRC---KIVASNIL 254
++L+ Q +S D K+C + A N+L
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 171
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVIL 313
+ +D KI+DFGLAR I + + T + ++ PE T + DV+SFGV+L
Sbjct: 172 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 231
Query: 314 LELVT 318
E+ T
Sbjct: 232 WEIFT 236
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L S AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 231 DWLR------------------NQAASLDW---------------GKRC---KIVASNIL 254
++L+ Q +S D K+C + A N+L
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVIL 313
+ +D KI+DFGLAR I + + T + ++ PE T + DV+SFGV+L
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 314 LELVT 318
E+ T
Sbjct: 243 WEIFT 247
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 115 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 234
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 294
Query: 313 LLELVT 318
+ E+ T
Sbjct: 295 MWEIFT 300
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L S AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 231 DWLR------------------NQAASLDW---------------GKRC---KIVASNIL 254
++L+ Q +S D K+C + A N+L
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 175
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVIL 313
+ +D KI+DFGLAR I + + T + ++ PE T + DV+SFGV+L
Sbjct: 176 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 235
Query: 314 LELVT 318
E+ T
Sbjct: 236 WEIFT 240
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L S AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 231 DWLR------------------NQAASLDW---------------GKRC---KIVASNIL 254
++L+ Q +S D K+C + A N+L
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVIL 313
+ +D KI+DFGLAR I + + T + ++ PE T + DV+SFGV+L
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 314 LELVT 318
E+ T
Sbjct: 243 WEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L S AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 231 DWLR------------------NQAASLDW---------------GKRC---KIVASNIL 254
++L+ Q +S D K+C + A N+L
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVIL 313
+ +D KI+DFGLAR I + + T + ++ PE T + DV+SFGV+L
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 314 LELVT 318
E+ T
Sbjct: 243 WEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L S AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 231 DWLR------------------NQAASLDW---------------GKRC---KIVASNIL 254
++L+ Q +S D K+C + A N+L
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 174
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVIL 313
+ +D KI+DFGLAR I + + T + ++ PE T + DV+SFGV+L
Sbjct: 175 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 234
Query: 314 LELVT 318
E+ T
Sbjct: 235 WEIFT 239
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 173 VAVKKL-SQATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L S AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 231 DWLR------------------NQAASLDW---------------GKRC---KIVASNIL 254
++L+ Q +S D K+C + A N+L
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVIL 313
+ +D KI+DFGLAR I + + T + ++ PE T + DV+SFGV+L
Sbjct: 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 283
Query: 314 LELVT 318
E+ T
Sbjct: 284 WEIFT 288
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + +T + ++ PE T + DV+SFGV+
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 313 LLELVT 318
+ E+ T
Sbjct: 249 MWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL 128
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 313 LLELVT 318
+ E+ T
Sbjct: 249 MWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 56 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNV 175
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 176 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 235
Query: 313 LLELVT 318
+ E+ T
Sbjct: 236 MWEIFT 241
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 69 TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 313 LLELVT 318
+ E+ T
Sbjct: 249 MWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 58 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 177
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 178 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 237
Query: 313 LLELVT 318
+ E+ T
Sbjct: 238 MWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 61 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 180
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 181 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 240
Query: 313 LLELVT 318
+ E+ T
Sbjct: 241 MWEIFT 246
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL 128
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 313 LLELVT 318
+ E+ T
Sbjct: 249 MWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ +I+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 189 LVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 313 LLELVT 318
+ E+ T
Sbjct: 249 MWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 129 REYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + T + ++ PE T + DV+SFGV+
Sbjct: 189 LVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 313 LLELVT 318
+ E+ T
Sbjct: 249 MWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ EY KG+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + T + ++ PE T + DV+SFGV+
Sbjct: 189 LVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 313 LLELVT 318
+ E+ T
Sbjct: 249 MWEIFT 254
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLG--YCSVDEEKLLVYEYMVKG 227
G VAVK+L + R+F E++ L + +V+ G Y + LV EY+ G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 228 SLDDWLRNQAASLDWGK------------------RC---KIVASNILLNDDFEAKISDF 266
L D+L+ A LD + RC + A NIL+ + KI+DF
Sbjct: 100 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 159
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
GLA+L+ + + G I + PE + + DV+SFGV+L EL T
Sbjct: 160 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLG--YCSVDEEKLLVYEYMVKG 227
G VAVK+L + R+F E++ L + +V+ G Y + LV EY+ G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 228 SLDDWLRNQAASLDWGK------------------RC---KIVASNILLNDDFEAKISDF 266
L D+L+ A LD + RC + A NIL+ + KI+DF
Sbjct: 99 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 158
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
GLA+L+ + + G I + PE + + DV+SFGV+L EL T
Sbjct: 159 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLG--YCSVDEEKLLVYEYMVKG 227
G VAVK+L + R+F E++ L + +V+ G Y E LV EY+ G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 228 SLDDWLRNQAASLDWGK------------------RC---KIVASNILLNDDFEAKISDF 266
L D+L+ A LD + RC + A NIL+ + KI+DF
Sbjct: 96 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 155
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
GLA+L+ + G I + PE + + DV+SFGV+L EL T
Sbjct: 156 GLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLG--YCSVDEEKLLVYEYMVKG 227
G VAVK+L + R+F E++ L + +V+ G Y + LV EY+ G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 228 SLDDWLRNQAASLDWGK------------------RC---KIVASNILLNDDFEAKISDF 266
L D+L+ A LD + RC + A NIL+ + KI+DF
Sbjct: 112 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 171
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
GLA+L+ + + G I + PE + + DV+SFGV+L EL T
Sbjct: 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 31/179 (17%)
Query: 173 VAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L T + REF +E +G +H N++ L G + +++ E+M G+LD
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 232 WLR----------------------NQAASLDWGKRCKIVASNILLNDDFEAKISDFGLA 269
+LR A + + R + A NIL+N + K+SDFGL+
Sbjct: 105 FLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR-DLAARNILVNSNLVCKVSDFGLS 163
Query: 270 RLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R + + S T + G +P PE K T D +S+G+++ E+++ G++P
Sbjct: 164 RFLEENSSD-PTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 68/253 (26%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
K VA+K++ + + + F E+ L V H N+V+L G C LV EY GSL
Sbjct: 31 AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSL 86
Query: 230 DDWLR--------NQAASLDWGKRC-------KIVASNILLNDDFEA------------K 262
+ L A ++ W +C + L++ D + K
Sbjct: 87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 146
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I DFG A D ++H+ T G+ ++ PE +E+ DV+S+G+IL E++T ++P
Sbjct: 147 ICDFGTA---CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 202
Query: 323 T----GPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML-----QIAT 373
GP F + W +H ++P ++K L + T
Sbjct: 203 FDEIGGPAFR-------IMWAVH-----------------NGTRPPLIKNLPKPIESLMT 238
Query: 374 GCISNDPTVRPTM 386
C S DP+ RP+M
Sbjct: 239 RCWSKDPSQRPSM 251
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ Y KG+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL 128
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 313 LLELVT 318
+ E+ T
Sbjct: 249 MWEIFT 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 68/253 (26%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
K VA+K++ + + + F E+ L V H N+V+L G C LV EY GSL
Sbjct: 32 AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSL 87
Query: 230 DDWLR--------NQAASLDWGKRC-------KIVASNILLNDDFEA------------K 262
+ L A ++ W +C + L++ D + K
Sbjct: 88 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 147
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I DFG A D ++H+ T G+ ++ PE +E+ DV+S+G+IL E++T ++P
Sbjct: 148 ICDFGTA---CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 203
Query: 323 T----GPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML-----QIAT 373
GP F + W +H ++P ++K L + T
Sbjct: 204 FDEIGGPAFR-------IMWAVH-----------------NGTRPPLIKNLPKPIESLMT 239
Query: 374 GCISNDPTVRPTM 386
C S DP+ RP+M
Sbjct: 240 RCWSKDPSQRPSM 252
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 31/179 (17%)
Query: 173 VAVKKLSQA-TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L T + REF +E +G +H N++ L G + +++ E+M G+LD
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 232 WLR----------------------NQAASLDWGKRCKIVASNILLNDDFEAKISDFGLA 269
+LR A + + R + A NIL+N + K+SDFGL+
Sbjct: 107 FLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR-DLAARNILVNSNLVCKVSDFGLS 165
Query: 270 RLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
R + + S T + G +P PE K T D +S+G+++ E+++ G++P
Sbjct: 166 RFLEENSSD-PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 39/186 (20%)
Query: 172 TVAVKKLSQ-ATGQGDREFAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L AT + + +EME + M+ KH+N++ LLG C+ D ++ Y KG+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL 128
Query: 230 DDWLRNQ-------------------------------AASLDW--GKRC---KIVASNI 253
++LR + A +++ ++C + A N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
L+ ++ KI+DFGLAR I++ + + T + ++ PE T + DV+SFGV+
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 313 LLELVT 318
+ E+ T
Sbjct: 249 MWEIFT 254
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 52/245 (21%)
Query: 170 GKTVAVKKLSQ-------ATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYE 222
G VAVK L++ G+ RE ++ L + +H ++++L S + +V E
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKRE----IQNLKLFRHPHIIKLYQVISTPTDFFMVME 91
Query: 223 YMVKGSLDDWLRNQA---------------ASLDWGKRCKIV-----ASNILLNDDFEAK 262
Y+ G L D++ +++D+ R +V N+LL+ AK
Sbjct: 92 YVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK 151
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEY-GGTGKATERGDVYSFGVILLELVTGKQ 321
I+DFGL+ ++SD E ++ G+ Y PE G A D++S GVIL L+ G
Sbjct: 152 IADFGLSNMMSDGEFLRTS--CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL 209
Query: 322 PTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPT 381
P F+D+ L K + P LN + ++ MLQ+ DP
Sbjct: 210 P----FDDEHVPTL-------FKKIRGGVFYIPEYLNRSVATLLMHMLQV-------DPL 251
Query: 382 VRPTM 386
R T+
Sbjct: 252 KRATI 256
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 170 GKTVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEK--LLVYEYMVK 226
G+ VAVK L + G R + E+E L + H+++V+ G C EK LV EY+
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 227 GSLDDWLRNQAASL--------------------DWGKRCKIVASNILLNDDFEAKISDF 266
GSL D+L L + R + A N+LL++D KI DF
Sbjct: 97 GSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR-ALAARNVLLDNDRLVKIGDF 155
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
GLA+ + + + G + + PE K DV+SFGV L EL+T
Sbjct: 156 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 170 GKTVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEK--LLVYEYMVK 226
G+ VAVK L + G R + E+E L + H+++V+ G C EK LV EY+
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 227 GSLDDWLRNQAASL--------------------DWGKRCKIVASNILLNDDFEAKISDF 266
GSL D+L L + R + A N+LL++D KI DF
Sbjct: 98 GSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR-ALAARNVLLDNDRLVKIGDF 156
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
GLA+ + + + G + + PE K DV+SFGV L EL+T
Sbjct: 157 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYH 92
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 93 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A + S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 151 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 52/245 (21%)
Query: 170 GKTVAVKKLSQ-------ATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYE 222
G VAVK L++ G+ RE ++ L + +H ++++L S + +V E
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKRE----IQNLKLFRHPHIIKLYQVISTPTDFFMVME 91
Query: 223 YMVKGSLDDWLRNQA---------------ASLDWGKRCKIV-----ASNILLNDDFEAK 262
Y+ G L D++ +++D+ R +V N+LL+ AK
Sbjct: 92 YVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK 151
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEY-GGTGKATERGDVYSFGVILLELVTGKQ 321
I+DFGL+ ++SD E + G+ Y PE G A D++S GVIL L+ G
Sbjct: 152 IADFGLSNMMSDGEFLRDS--CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL 209
Query: 322 PTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPT 381
P F+D+ L K + P LN + ++ MLQ+ DP
Sbjct: 210 P----FDDEHVPTL-------FKKIRGGVFYIPEYLNRSVATLLMHMLQV-------DPL 251
Query: 382 VRPTM 386
R T+
Sbjct: 252 KRATI 256
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 98/260 (37%), Gaps = 64/260 (24%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L + +RE +E++ L + H N+V LLG C++ L++ EY G L
Sbjct: 55 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 114
Query: 230 DDWLRNQAASLDWGKRCKIV--------------------------------------AS 251
++LR + S K + A
Sbjct: 115 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 174
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGT----IGYVPPEYGGTGKATERGDVY 307
NILL KI DFGLAR D ++ + VV G + ++ PE T DV+
Sbjct: 175 NILLTHGRITKICDFGLAR---DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 231
Query: 308 SFGVILLELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
S+G+ L EL + G P D ++ M+ E A PA
Sbjct: 232 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA-----PA----------- 275
Query: 367 KMLQIATGCISNDPTVRPTM 386
+M I C DP RPT
Sbjct: 276 EMYDIMKTCWDADPLKRPTF 295
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 98/260 (37%), Gaps = 64/260 (24%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L + +RE +E++ L + H N+V LLG C++ L++ EY G L
Sbjct: 71 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 130
Query: 230 DDWLRNQAASLDWGKRCKIV--------------------------------------AS 251
++LR + S K + A
Sbjct: 131 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 190
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGT----IGYVPPEYGGTGKATERGDVY 307
NILL KI DFGLAR D ++ + VV G + ++ PE T DV+
Sbjct: 191 NILLTHGRITKICDFGLAR---DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 247
Query: 308 SFGVILLELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
S+G+ L EL + G P D ++ M+ E A PA
Sbjct: 248 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA-----PA----------- 291
Query: 367 KMLQIATGCISNDPTVRPTM 386
+M I C DP RPT
Sbjct: 292 EMYDIMKTCWDADPLKRPTF 311
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 98/260 (37%), Gaps = 64/260 (24%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L + +RE +E++ L + H N+V LLG C++ L++ EY G L
Sbjct: 73 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 132
Query: 230 DDWLRNQAASLDWGKRCKIV--------------------------------------AS 251
++LR + S K + A
Sbjct: 133 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 192
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGT----IGYVPPEYGGTGKATERGDVY 307
NILL KI DFGLAR D ++ + VV G + ++ PE T DV+
Sbjct: 193 NILLTHGRITKICDFGLAR---DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 249
Query: 308 SFGVILLELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
S+G+ L EL + G P D ++ M+ E A PA
Sbjct: 250 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA-----PA----------- 293
Query: 367 KMLQIATGCISNDPTVRPTM 386
+M I C DP RPT
Sbjct: 294 EMYDIMKTCWDADPLKRPTF 313
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 98/260 (37%), Gaps = 64/260 (24%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L + +RE +E++ L + H N+V LLG C++ L++ EY G L
Sbjct: 78 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 230 DDWLRNQAASLDWGKRCKIV--------------------------------------AS 251
++LR + S K + A
Sbjct: 138 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 197
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGT----IGYVPPEYGGTGKATERGDVY 307
NILL KI DFGLAR D ++ + VV G + ++ PE T DV+
Sbjct: 198 NILLTHGRITKICDFGLAR---DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 254
Query: 308 SFGVILLELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
S+G+ L EL + G P D ++ M+ E A PA
Sbjct: 255 SYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA-----PA----------- 298
Query: 367 KMLQIATGCISNDPTVRPTM 386
+M I C DP RPT
Sbjct: 299 EMYDIMKTCWDADPLKRPTF 318
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDWGKR 245
HQ++V G+ ++ +V E + SL + +LR + R
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 133
Query: 246 CKIVAS-----NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKA 300
+++ N+ LN+D E KI DFGLA + + + V+ GT Y+ PE
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGH 192
Query: 301 TERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN 360
+ DV+S G I+ L+ GK P FE L + L + KNE + P +N
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPP----FET---SCLKETYLRIKKNEYS----IPKHINPV 241
Query: 361 SKPTMLKMLQIATGCISNDPTVRPTM 386
+ + KMLQ DPT RPT+
Sbjct: 242 AASLIQKMLQ-------TDPTARPTI 260
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 94
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 95 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 152
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A + S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 153 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 187 REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA-------- 238
+ F E+ + HQN+V ++ D+ LV EY+ +L +++ +
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 239 ----SLDWGKRCK--------IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT 286
LD K I NIL++ + KI DFG+A+ +S+ + V GT
Sbjct: 116 FTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGT 175
Query: 287 IGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ Y PE E D+YS G++L E++ G+ P E
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 119
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 120 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 177
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A + S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 178 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 97/257 (37%), Gaps = 58/257 (22%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
TVAVK L + +RE +E++ L + H N+V LLG C++ L++ EY G L
Sbjct: 78 TVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 230 DDWLRNQAASLDWGKRCKIV--------------------------------------AS 251
++LR + S K + A
Sbjct: 138 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 197
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL KI DFGLAR I + ++V A + ++ PE T DV+S+G
Sbjct: 198 NILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 257
Query: 311 VILLELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML 369
+ L EL + G P D ++ M+ E A PA +M
Sbjct: 258 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA-----PA-----------EMY 301
Query: 370 QIATGCISNDPTVRPTM 386
I C DP RPT
Sbjct: 302 DIMKTCWDADPLKRPTF 318
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 97
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 98 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 155
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A + S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 156 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDWGKR 245
HQ++V G+ ++ +V E + SL + +LR + R
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 157
Query: 246 CKIVAS-----NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKA 300
+++ N+ LN+D E KI DFGLA + + + V+ GT Y+ PE
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGH 216
Query: 301 TERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN 360
+ DV+S G I+ L+ GK P FE L + L + KNE + P +N
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPP----FET---SCLKETYLRIKKNEYS----IPKHINPV 265
Query: 361 SKPTMLKMLQIATGCISNDPTVRPTM 386
+ + KMLQ DPT RPT+
Sbjct: 266 AASLIQKMLQ-------TDPTARPTI 284
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 120
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 121 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 178
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A + S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 179 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 97
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 98 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 155
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A + S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 156 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDWGKR 245
HQ++V G+ ++ +V E + SL + +LR + R
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 159
Query: 246 CKIVA-----SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKA 300
+++ N+ LN+D E KI DFGLA + + + V+ GT Y+ PE
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGH 218
Query: 301 TERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN 360
+ DV+S G I+ L+ GK P FE L + L + KNE + P +N
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPP----FET---SCLKETYLRIKKNEYS----IPKHINPV 267
Query: 361 SKPTMLKMLQIATGCISNDPTVRPTM 386
+ + KMLQ DPT RPT+
Sbjct: 268 AASLIQKMLQ-------TDPTARPTI 286
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 92
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 93 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A + S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 151 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 102
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 103 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 162
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + G G +P PE G T DV+SFGV+L E+
Sbjct: 163 KIGDFGMTRDIXETDXXRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML L++ C
Sbjct: 219 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--LELMRMC 261
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 262 WQYNPKMRPSFLE 274
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 50/236 (21%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
VAVK + + + F AE + ++H LV+L + E ++ E+M KGSL D+
Sbjct: 209 VAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDF 266
Query: 233 LRNQAAS-------LDWGKRCK---------------IVASNILLNDDFEAKISDFGLAR 270
L++ S +D+ + + A+NIL++ KI+DFGLAR
Sbjct: 267 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 326
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDK 330
+ + I + PE G T + DV+SFG++L+E+VT + P +
Sbjct: 327 VGAKF----------PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 376
Query: 331 DGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
+ ++ M + E E ++ I C N P RPT
Sbjct: 377 EVIRALERGYRMPRPENCPE----------------ELYNIMMRCWKNRPEERPTF 416
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 58/252 (23%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 140 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 199
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 200 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 256 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 298
Query: 376 ISNDPTVRPTML 387
+P +RP+ L
Sbjct: 299 WQYNPKMRPSFL 310
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 164
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 165 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 221 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 263
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 264 WQYNPKMRPSFLE 276
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 170 GKTVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEK--LLVYEYMVK 226
G+ VAVK L G R + E++ L + H+++++ G C EK LV EY+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 227 GSLDDWLRNQAASL--------------------DWGKRCKIVASNILLNDDFEAKISDF 266
GSL D+L + L + R + A N+LL++D KI DF
Sbjct: 103 GSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHR-NLAARNVLLDNDRLVKIGDF 161
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
GLA+ + + + G + + PE K DV+SFGV L EL+T
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 170
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 171 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 227 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 269
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 270 WQYNPKMRPSFLE 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 171
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 172 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 228 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 270
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 271 WQYNPKMRPSFLE 283
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 170
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 171 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 227 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 269
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 270 WQYNPKMRPSFLE 282
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N + +DF
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTV 164
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 165 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML L++ C
Sbjct: 221 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--LELMRMC 263
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 264 WQYNPKMRPSFLE 276
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 170 GKTVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEK--LLVYEYMVK 226
G+ VAVK L G R + E++ L + H+++++ G C EK LV EY+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 227 GSLDDWLRNQAASL--------------------DWGKRCKIVASNILLNDDFEAKISDF 266
GSL D+L + L + R + A N+LL++D KI DF
Sbjct: 103 GSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR-NLAARNVLLDNDRLVKIGDF 161
Query: 267 GLARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
GLA+ + + + G + + PE K DV+SFGV L EL+T
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 108
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 109 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 168
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 169 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 225 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 267
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 268 WQYNPKMRPSFLE 280
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 118 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 177
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 178 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 234 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 276
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 277 WQYNPKMRPSFLE 289
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 118 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 177
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 178 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 234 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 276
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 277 WQYNPKMRPSFLE 289
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 106/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 107
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 108 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 167
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T DV+SFGV+L E+
Sbjct: 168 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 224 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 266
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 267 WQYNPKMRPSFLE 279
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 47/197 (23%)
Query: 173 VAVKKLSQ-ATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK L + A+ +F E + + N+V+LLG C+V + L++EYM G L++
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 232 WLRNQ---------------------------------------AASLDWGKRCKIV--- 249
+LR+ AA + + K V
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 199
Query: 250 --ASNILLNDDFEAKISDFGLARLISDCESHVSTVV-AGTIGYVPPEYGGTGKATERGDV 306
N L+ ++ KI+DFGL+R I + + + A I ++PPE + T DV
Sbjct: 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDV 259
Query: 307 YSFGVILLELVT-GKQP 322
+++GV+L E+ + G QP
Sbjct: 260 WAYGVVLWEIFSYGLQP 276
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 112
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 113 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 170
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 171 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 39/206 (18%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDWGKR 245
HQ++V G+ ++ +V E + SL + +LR + R
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 139
Query: 246 CKIVAS-----NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKA 300
+++ N+ LN+D E KI DFGLA + + + + GT Y+ PE
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGH 198
Query: 301 TERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN 360
+ DV+S G I+ L+ GK P FE L + L + KNE + P +N
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPP----FET---SCLKETYLRIKKNEYS----IPKHINPV 247
Query: 361 SKPTMLKMLQIATGCISNDPTVRPTM 386
+ + KMLQ DPT RPT+
Sbjct: 248 AASLIQKMLQ-------TDPTARPTI 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 96
Query: 223 YMVKG-------SLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
++ L D R A +D+ I+ ++NI L++D KI DFGLA
Sbjct: 97 HLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 156
Query: 271 LISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
+ S SH ++G+I ++ PE + + + DVY+FG++L EL+TG+ P
Sbjct: 157 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 39/206 (18%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDWGKR 245
HQ++V G+ ++ +V E + SL + +LR + R
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 246 CKIVAS-----NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKA 300
+++ N+ LN+D E KI DFGLA + + + + GT Y+ PE
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 301 TERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN 360
+ DV+S G I+ L+ GK P FE L + L + KNE + P +N
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPP----FET---SCLKETYLRIKKNEYS----IPKHINPV 243
Query: 361 SKPTMLKMLQIATGCISNDPTVRPTM 386
+ + KMLQ DPT RPT+
Sbjct: 244 AASLIQKMLQ-------TDPTARPTI 262
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 50/248 (20%)
Query: 173 VAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L ++E +E++ + + +H+N+V LLG C+ L++ EY G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 231 DWLRNQA-ASLD--------------------------WGKRC---KIVASNILLNDDFE 260
++LR +A A LD K C + A N+LL +
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 190
Query: 261 AKISDFGLAR-LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT- 318
AKI DFGLAR +++D V + ++ PE T + DV+S+G++L E+ +
Sbjct: 191 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 250
Query: 319 GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISN 378
G P + LV + ++ PA N + I C +
Sbjct: 251 GLNPYPGILVNSKFYKLV---------KDGYQMAQPAFAPKN-------IYSIMQACWAL 294
Query: 379 DPTVRPTM 386
+PT RPT
Sbjct: 295 EPTHRPTF 302
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 105/253 (41%), Gaps = 58/253 (22%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K +++A +R EF E + ++V LLG S + L++ E M +G L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ +DF
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 171
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + G G +P PE G T DV+SFGV+L E+
Sbjct: 172 KIGDFGMTRDIXETDXXRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
T +QP ++ E ++ +V+ +LD ++ P ML ++ C
Sbjct: 228 ATLAEQP----YQGLSNEQVLRFVME-------GGLLD----KPDNCPDML--FELMRMC 270
Query: 376 ISNDPTVRPTMLH 388
+P +RP+ L
Sbjct: 271 WQYNPKMRPSFLE 283
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 39/206 (18%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDWGKR 245
HQ++V G+ ++ +V E + SL + +LR + R
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 246 CKIVAS-----NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKA 300
+++ N+ LN+D E KI DFGLA + + + + GT Y+ PE
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 301 TERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN 360
+ DV+S G I+ L+ GK P FE L + L + KNE + P +N
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPP----FET---SCLKETYLRIKKNEYS----IPKHINPV 243
Query: 361 SKPTMLKMLQIATGCISNDPTVRPTM 386
+ + KMLQ DPT RPT+
Sbjct: 244 AASLIQKMLQ-------TDPTARPTI 262
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 120
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 121 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 178
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 179 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 30/178 (16%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 92
Query: 223 Y---------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
+ M+K L D R A +D+ I+ ++NI L++D KI DFGL
Sbjct: 93 HLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
Query: 269 ARLISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
A S SH ++G+I ++ PE + + DVY+FG++L EL+TG+ P
Sbjct: 151 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 50/248 (20%)
Query: 173 VAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L ++E +E++ + + +H+N+V LLG C+ L++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 231 DWLRNQA-ASLD--------------------------WGKRC---KIVASNILLNDDFE 260
++LR +A A LD K C + A N+LL +
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 198
Query: 261 AKISDFGLAR-LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT- 318
AKI DFGLAR +++D V + ++ PE T + DV+S+G++L E+ +
Sbjct: 199 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 258
Query: 319 GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISN 378
G P + LV + ++ PA N + I C +
Sbjct: 259 GLNPYPGILVNSKFYKLV---------KDGYQMAQPAFAPKN-------IYSIMQACWAL 302
Query: 379 DPTVRPTM 386
+PT RPT
Sbjct: 303 EPTHRPTF 310
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 102/245 (41%), Gaps = 52/245 (21%)
Query: 170 GKTVAVKKLSQ-------ATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYE 222
G VAVK L++ G+ RE ++ L + +H ++++L S + +V E
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRRE----IQNLKLFRHPHIIKLYQVISTPSDIFMVME 96
Query: 223 YMVKGSLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAK 262
Y+ G L D++ + + +D+ R +V N+LL+ AK
Sbjct: 97 YVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAK 156
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEY-GGTGKATERGDVYSFGVILLELVTGKQ 321
I+DFGL+ ++SD E G+ Y PE G A D++S GVIL L+ G
Sbjct: 157 IADFGLSNMMSDGE--FLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTL 214
Query: 322 PTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPT 381
P F+D D V + K P LN + + MLQ+ DP
Sbjct: 215 P----FDD-------DHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQV-------DPM 256
Query: 382 VRPTM 386
R T+
Sbjct: 257 KRATI 261
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 44/230 (19%)
Query: 167 MPDGKT----VAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G++ V +K + +G Q + M +G + H ++V LLG C +L V
Sbjct: 35 IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VT 93
Query: 222 EYMVKGSLDDWLRNQAASL------DWGKRCK---------------IVASNILLNDDFE 260
+Y+ GSL D +R +L +WG + + A N+LL +
Sbjct: 94 QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQ 153
Query: 261 AKISDFGLARLISDCESHVSTVVAGT-IGYVPPEYGGTGKATERGDVYSFGVILLELVT- 318
+++DFG+A L+ + + A T I ++ E GK T + DV+S+GV + EL+T
Sbjct: 154 VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTF 213
Query: 319 GKQPTG-------PEFEDKDGENL-------VDWVLHMMKNEQADEVLDP 354
G +P P+ +K GE L +D + M+K DE + P
Sbjct: 214 GAEPYAGLRLAEVPDLLEK-GERLAQPQICTIDVYMVMVKCWMIDENIRP 262
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYH 108
Query: 223 YMVKG-------SLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
++ L D R A +D+ I+ ++NI L++D KI DFGLA
Sbjct: 109 HLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 168
Query: 271 LISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
S SH ++G+I ++ PE + + + DVY+FG++L EL+TG+ P
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 29/184 (15%)
Query: 167 MPDGKT----VAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G++ V +K + +G Q + M +G + H ++V LLG C +L V
Sbjct: 53 IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VT 111
Query: 222 EYMVKGSLDDWLRNQAASL------DWGKRCK---------------IVASNILLNDDFE 260
+Y+ GSL D +R +L +WG + + A N+LL +
Sbjct: 112 QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQ 171
Query: 261 AKISDFGLARLISDCESHVSTVVAGT-IGYVPPEYGGTGKATERGDVYSFGVILLELVT- 318
+++DFG+A L+ + + A T I ++ E GK T + DV+S+GV + EL+T
Sbjct: 172 VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTF 231
Query: 319 GKQP 322
G +P
Sbjct: 232 GAEP 235
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 54/197 (27%)
Query: 172 TVAVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
TVAVK L + + R+ +E L V H ++++L G CS D LL+ EY GSL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 231 DWLRNQ---------------------------------------AASLDWGKRCKIV-- 249
+LR + + + K+V
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR 174
Query: 250 ---ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGK-----AT 301
A NIL+ + + KISDFGL+R + + +S+V + G +P ++ T
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR----SQGRIPVKWMAIESLFDHIYT 230
Query: 302 ERGDVYSFGVILLELVT 318
+ DV+SFGV+L E+VT
Sbjct: 231 TQSDVWSFGVLLWEIVT 247
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 49/252 (19%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
G+ + +K+L + + R F E++ + ++H N+++ +G D+ + EY+ G+L
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
Query: 230 DDWLRNQAASLDWGKR---CKIVAS------------------NILLNDDFEAKISDFGL 268
+++ + W +R K +AS N L+ ++ ++DFGL
Sbjct: 95 RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGL 154
Query: 269 ARLISDCESHVSTV-------------VAGTIGYVPPEYGGTGKATERGDVYSFGVILLE 315
ARL+ D ++ + V G ++ PE E+ DV+SFG++L E
Sbjct: 155 ARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE 214
Query: 316 LVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
++ G+ P++ + +D+ L++ D P N P+ I C
Sbjct: 215 II-GRVNADPDYLPRT----MDFGLNV--RGFLDRYCPP-----NCPPSFFP---ITVRC 259
Query: 376 ISNDPTVRPTML 387
DP RP+ +
Sbjct: 260 CDLDPEKRPSFV 271
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 48/242 (19%)
Query: 174 AVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKL--LVYEYMVKGSLD 230
A+K LS+ T E F E + + H N++ L+G + E L ++ YM G L
Sbjct: 53 AIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG-IMLPPEGLPHVLLPYMCHGDLL 111
Query: 231 DWLRNQ----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA 269
++R+ A +++ K V A N +L++ F K++DFGLA
Sbjct: 112 QFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLA 171
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGG-----TGKATERGDVYSFGVILLELVTGKQPTG 324
R I D E + +V +P ++ T + T + DV+SFGV+L EL+T
Sbjct: 172 RDILDREYY--SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG---A 226
Query: 325 PEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
P + D +L ++ + Q + D + Q+ C DP VRP
Sbjct: 227 PPYRHIDPFDLTHFLAQGRRLPQPEYCPD-------------SLYQVMQQCWEADPAVRP 273
Query: 385 TM 386
T
Sbjct: 274 TF 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 173 VAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK L + T Q + F E+ L +H N++ +GY + + ++ +Y
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYH 108
Query: 223 YMVKG-------SLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
++ L D R A +D+ I+ ++NI L++D KI DFGLA
Sbjct: 109 HLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT 168
Query: 271 LISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
S SH ++G+I ++ PE + + + DVY+FG++L EL+TG+ P
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 98/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + + HQN+V +G + ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 178
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 179 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 239 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 281
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 282 CWQHQPEDRPNF 293
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 98/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + + HQN+V +G + ++ E M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 192
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 253 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 295
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 296 CWQHQPEDRPNF 307
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 172 TVAVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
TVAVK L + + R+ +E L V H ++++L G CS D LL+ EY GSL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 231 DWLRNQ---------------------------------------AASLDWGKRCKIV-- 249
+LR + + + K+V
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR 174
Query: 250 ---ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGK-----AT 301
A NIL+ + + KISDFGL+R + + +S V + G +P ++ T
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR----SQGRIPVKWMAIESLFDHIYT 230
Query: 302 ERGDVYSFGVILLELVT 318
+ DV+SFGV+L E+VT
Sbjct: 231 TQSDVWSFGVLLWEIVT 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 37/205 (18%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 85 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 144
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 145 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 204
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 205 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 264
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWV 339
+ + G P + K + ++++V
Sbjct: 265 IFSLGYMP----YPSKSNQEVLEFV 285
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 65 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 124
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 125 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 184
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 185 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 244
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 245 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 287
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 288 CWQHQPEDRPNF 299
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 37/205 (18%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 75 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 134
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 135 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 194
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 195 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 254
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWV 339
+ + G P + K + ++++V
Sbjct: 255 IFSLGYMP----YPSKSNQEVLEFV 275
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 117
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 177
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 238 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 280
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 281 CWQHQPEDRPNF 292
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 117
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 177
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 238 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 280
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 281 CWQHQPEDRPNF 292
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 178
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 179 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 239 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 281
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 282 CWQHQPEDRPNF 293
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 50 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 109
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 110 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 169
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 170 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 229
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 230 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 272
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 273 CWQHQPEDRPNF 284
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRN---------- 235
+ + E+E ++H N++ L GY L+ EY +G + L+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 236 -------QAASLDWGKRC---KIVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
A S KR I N+LL E KI+DFG + S T + G
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 173
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 233
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 234 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 50/189 (26%)
Query: 173 VAVKKLSQATGQGD-REFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLVYEYMVKGSLD 230
A+K++ + + D R+FA E+E L + H N++ LLG C L EY G+L
Sbjct: 52 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 111
Query: 231 DWLR--------------NQAAS-----------------LDWGKRCKIV-----ASNIL 254
D+LR N AS +D+ + + + A NIL
Sbjct: 112 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNIL 171
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGT-----GKATERGDVYSF 309
+ +++ AKI+DFGL+R V T+G +P + T DV+S+
Sbjct: 172 VGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 224
Query: 310 GVILLELVT 318
GV+L E+V+
Sbjct: 225 GVLLWEIVS 233
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 132
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 192
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 253 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 295
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 296 CWQHQPEDRPNF 307
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 50/189 (26%)
Query: 173 VAVKKLSQATGQGD-REFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLVYEYMVKGSLD 230
A+K++ + + D R+FA E+E L + H N++ LLG C L EY G+L
Sbjct: 45 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 104
Query: 231 DWLR--------------NQAAS-----------------LDWGKRCKIV-----ASNIL 254
D+LR N AS +D+ + + + A NIL
Sbjct: 105 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL 164
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGT-----GKATERGDVYSF 309
+ +++ AKI+DFGL+R V T+G +P + T DV+S+
Sbjct: 165 VGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 217
Query: 310 GVILLELVT 318
GV+L E+V+
Sbjct: 218 GVLLWEIVS 226
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 54/252 (21%)
Query: 173 VAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L ++E +E++ + + +H+N+V LLG C+ L++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 231 DWLRNQAASLD-------------------------------WGKRC---KIVASNILLN 256
++LR ++ L+ K C + A N+LL
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 257 DDFEAKISDFGLAR-LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE 315
+ AKI DFGLAR +++D V + ++ PE T + DV+S+G++L E
Sbjct: 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 258
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + LV + ++ PA N + I
Sbjct: 259 IFSLGLNPYPGILVNSKFYKLV---------KDGYQMAQPAFAPKN-------IYSIMQA 302
Query: 375 CISNDPTVRPTM 386
C + +PT RPT
Sbjct: 303 CWALEPTHRPTF 314
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 50/189 (26%)
Query: 173 VAVKKLSQATGQGD-REFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLVYEYMVKGSLD 230
A+K++ + + D R+FA E+E L + H N++ LLG C L EY G+L
Sbjct: 55 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 114
Query: 231 DWLR--------------NQAAS-----------------LDWGKRCKIV-----ASNIL 254
D+LR N AS +D+ + + + A NIL
Sbjct: 115 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL 174
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGT-----GKATERGDVYSF 309
+ +++ AKI+DFGL+R V T+G +P + T DV+S+
Sbjct: 175 VGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 227
Query: 310 GVILLELVT 318
GV+L E+V+
Sbjct: 228 GVLLWEIVS 236
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 54/252 (21%)
Query: 173 VAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L ++E +E++ + + +H+N+V LLG C+ L++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 231 DWLRNQAASLD-------------------------------WGKRC---KIVASNILLN 256
++LR ++ L+ K C + A N+LL
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 257 DDFEAKISDFGLAR-LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE 315
+ AKI DFGLAR +++D V + ++ PE T + DV+S+G++L E
Sbjct: 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 258
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + LV + ++ PA N + I
Sbjct: 259 IFSLGLNPYPGILVNSKFYKLV---------KDGYQMAQPAFAPKN-------IYSIMQA 302
Query: 375 CISNDPTVRPTM 386
C + +PT RPT
Sbjct: 303 CWALEPTHRPTF 314
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 73 PSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 192
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 253 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 295
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 296 CWQHQPEDRPNF 307
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 99 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 158
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 159 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 218
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 278
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 279 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 321
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 322 CWQHQPEDRPNF 333
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 41/173 (23%)
Query: 192 EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD--------------DWLRNQA 237
E + M+KH N++ L G C + LV E+ G L+ +W A
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIA 115
Query: 238 ASLDWGKRCKIV--------ASNILLNDDFE--------AKISDFGLARLISDCESHVST 281
+++ IV +SNIL+ E KI+DFGLAR E H +T
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTT 170
Query: 282 VV--AGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDKDG 332
+ AG ++ PE ++ DV+S+GV+L EL+TG+ P F DG
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP----FRGIDG 219
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 76 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 135
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 136 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 195
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+AR I + A + ++PPE G T + D +SFGV+L E
Sbjct: 196 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 255
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 256 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 298
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 299 CWQHQPEDRPNF 310
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 54/197 (27%)
Query: 172 TVAVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
TVAVK L + + R+ +E L V H ++++L G CS D LL+ EY GSL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 231 DWLRNQAA-------------------------------SLDWG-------------KRC 246
+LR S W
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHR 174
Query: 247 KIVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGK-----AT 301
+ A NIL+ + + KISDFGL+R + + +S V + G +P ++ T
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR----SQGRIPVKWMAIESLFDHIYT 230
Query: 302 ERGDVYSFGVILLELVT 318
+ DV+SFGV+L E+VT
Sbjct: 231 TQSDVWSFGVLLWEIVT 247
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVY 307
I A+N+LL++ E K++DFG+A ++D + +T V GT ++ PE + D++
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADIW 188
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN-SKPTML 366
S G+ +EL G+ P LH MK +P L N SKP
Sbjct: 189 SLGITAIELARGEPPHSE--------------LHPMKVLFLIPKNNPPTLEGNYSKP--- 231
Query: 367 KMLQIATGCISNDPTVRPT 385
+ + C++ +P+ RPT
Sbjct: 232 -LKEFVEACLNKEPSFRPT 249
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T ++G
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSG 169
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 229
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 230 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 29/184 (15%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+TV A+K L++ TG + + EF E + + H +LV LLG C + LV
Sbjct: 37 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVC-LSPTIQLVT 95
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L +++ + L+W + + A N+L+
Sbjct: 96 QLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH 155
Query: 261 AKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT- 318
KI+DFGLARL+ D + + + I ++ E K T + DV+S+GV + EL+T
Sbjct: 156 VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF 215
Query: 319 GKQP 322
G +P
Sbjct: 216 GGKP 219
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 29/184 (15%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+TV A+K L++ TG + + EF E + + H +LV LLG C + LV
Sbjct: 60 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVC-LSPTIQLVT 118
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L +++ + L+W + + A N+L+
Sbjct: 119 QLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH 178
Query: 261 AKISDFGLARLI-SDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT- 318
KI+DFGLARL+ D + + + I ++ E K T + DV+S+GV + EL+T
Sbjct: 179 VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF 238
Query: 319 GKQP 322
G +P
Sbjct: 239 GGKP 242
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 173
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 233
Query: 328 EDKDGENLVDWVLHMMKNEQAD--EVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 234 VTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSSKPS 273
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 171
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 232 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 168
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 229 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 173
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 233
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 234 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVY 307
I A+N+LL++ E K++DFG+A ++D + +T V GT ++ PE + D++
Sbjct: 150 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADIW 208
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN-SKPTML 366
S G+ +EL G+ P LH MK +P L N SKP
Sbjct: 209 SLGITAIELARGEPPHSE--------------LHPMKVLFLIPKNNPPTLEGNYSKP--- 251
Query: 367 KMLQIATGCISNDPTVRPT 385
+ + C++ +P+ RPT
Sbjct: 252 -LKEFVEACLNKEPSFRPT 269
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 194
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 254
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 255 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 56/254 (22%)
Query: 173 VAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L ++E +E++ + + +H+N+V LLG C+ L++ EY G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 231 DWLRN---------------------------------QAASLDWGKRC---KIVASNIL 254
++LR Q + K C + A N+L
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 198
Query: 255 LNDDFEAKISDFGLAR-LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVIL 313
L + AKI DFGLAR +++D V + ++ PE T + DV+S+G++L
Sbjct: 199 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 258
Query: 314 LELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIA 372
E+ + G P + LV + ++ PA N + I
Sbjct: 259 WEIFSLGLNPYPGILVNSKFYKLV---------KDGYQMAQPAFAPKN-------IYSIM 302
Query: 373 TGCISNDPTVRPTM 386
C + +PT RPT
Sbjct: 303 QACWALEPTHRPTF 316
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 110
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 111 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 167
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 227
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 228 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 115
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 172
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 232
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 233 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 27/181 (14%)
Query: 171 KTVAVKKLS-QATGQGDREFAAEMET--LGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
+ VA+K +S Q + D E E L +++H ++++L + + ++V EY G
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGG 93
Query: 228 SLDDWLRNQA---------------ASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
L D++ + ++++ R KIV N+LL+D+ KI+DFG
Sbjct: 94 ELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFG 153
Query: 268 LARLISDCESHVSTVVAGTIGYVPPEY-GGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
L+ +++D + G+ Y PE G A DV+S G++L ++ G+ P E
Sbjct: 154 LSNIMTD--GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
Query: 327 F 327
F
Sbjct: 212 F 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVA--GTIGYVPPEYGGTGKATERGDVYS 308
+NI+++ K+ DFG+AR I+D + V+ A GT Y+ PE R DVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 309 FGVILLELVTGKQPTGPEFEDKDGENLV--DWVLHMMKNEQADEVLDPAVLNANSK 362
G +L E++TG+ P + D V D + ++E LD VL A +K
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 53/244 (21%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK ++++ +R EF E + ++V LLG S + L+V E M G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 232 WLRN---------------------QAASLDWGK---------RCKIVASNILLNDDFEA 261
+LR+ AA + G + A N ++ DF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTV 169
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T D++SFGV+L E+
Sbjct: 170 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAV--------LNANSKPTMLK 367
+ +QP ++ E ++ +V+ +Q D + N N +PT L+
Sbjct: 226 TSLAEQP----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 368 MLQI 371
++ +
Sbjct: 282 IVNL 285
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHV--STVVAGTIGYVPPEYGGTGKATERGDVYS 308
+NIL++ K+ DFG+AR I+D + V + V GT Y+ PE R DVYS
Sbjct: 145 ANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 309 FGVILLELVTGKQP 322
G +L E++TG+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 128
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 129 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 185
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 245
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 246 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 285
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 53/244 (21%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK ++++ +R EF E + ++V LLG S + L+V E M G L
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 232 WLRN---------------------QAASLDWGK---------RCKIVASNILLNDDFEA 261
+LR+ AA + G + A N ++ DF
Sbjct: 111 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTV 170
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T D++SFGV+L E+
Sbjct: 171 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAV--------LNANSKPTMLK 367
+ +QP ++ E ++ +V+ +Q D + N N +PT L+
Sbjct: 227 TSLAEQP----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLE 282
Query: 368 MLQI 371
++ +
Sbjct: 283 IVNL 286
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 97/252 (38%), Gaps = 50/252 (19%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P VAVK L + + D +F E + HQN+V +G + ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 227 GSLDDWLR------NQAASL----------DWGKRCKIVASNILLNDDFE---------- 260
G L +LR +Q +SL D C+ + N ++ D
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 178
Query: 261 ----AKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLE 315
AKI DFG+A+ I + A + ++PPE G T + D +SFGV+L E
Sbjct: 179 PGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 316 LVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATG 374
+ + G P + K + ++++V + + P + +I T
Sbjct: 239 IFSLGYMP----YPSKSNQEVLEFVTSGGRMDPPKNCPGP-------------VYRIMTQ 281
Query: 375 CISNDPTVRPTM 386
C + P RP
Sbjct: 282 CWQHQPEDRPNF 293
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 98
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ + K+ DFGL+
Sbjct: 99 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 159 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 214
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 215 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 257
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 98
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ + K+ DFGL+
Sbjct: 99 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 159 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 214
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 215 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 257
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 170 GKTVAVKKLS-QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEK--LLVYEYMVK 226
G+ VAVK L ++ G + E+E L + H+N+V+ G C+ D L+ E++
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 227 GSLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDFEAKISD 265
GSL ++L ++ ++ K + A N+L+ + + KI D
Sbjct: 110 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 169
Query: 266 FGLARLISDCESHVSTVV---AGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
FGL + I + + TV + + PE K DV+SFGV L EL+T
Sbjct: 170 FGLTKAI-ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + K++ N+LL E KI+DFG + S + G
Sbjct: 112 TYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCG 168
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDF 228
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 229 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCG 168
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 229 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 170 GKTVAVKKLS-QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEK--LLVYEYMVK 226
G+ VAVK L ++ G + E+E L + H+N+V+ G C+ D L+ E++
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 227 GSLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDFEAKISD 265
GSL ++L ++ ++ K + A N+L+ + + KI D
Sbjct: 98 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 157
Query: 266 FGLARLISDCESHVSTVV---AGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
FGL + I + + TV + + PE K DV+SFGV L EL+T
Sbjct: 158 FGLTKAI-ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 68 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 126
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ + K+ DFGL+
Sbjct: 127 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 187 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 242
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 243 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 285
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 43/216 (19%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 171
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNANS 361
+ +L+ +L +++ EVL+ + ANS
Sbjct: 232 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 36/186 (19%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQ----NLVELLGYCSVDEEKLLVYEYMVKGS 228
VA+K L Q T + D E EM + HQ +V L+G C E +LV E G
Sbjct: 40 VAIKVLKQGTEKADTE---EMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 95
Query: 229 LDDWLRNQAASLDWGKRCKIV---------------------ASNILLNDDFEAKISDFG 267
L +L + + +++ A N+LL + AKISDFG
Sbjct: 96 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG 155
Query: 268 LARLISDCESHVSTVVAGT--IGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQP-- 322
L++ + +S+ + AG + + PE K + R DV+S+GV + E L G++P
Sbjct: 156 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
Query: 323 --TGPE 326
GPE
Sbjct: 216 KMKGPE 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 43 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 101
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ + K+ DFGL+
Sbjct: 102 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 162 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 217
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 218 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 260
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 45 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 103
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ + K+ DFGL+
Sbjct: 104 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 219
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 220 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 262
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 173 VAVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VA+K L Q T + D E E + + + + +V L+G C E +LV E G L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHK 424
Query: 232 WLRNQAASLDWGKRCKIV---------------------ASNILLNDDFEAKISDFGLAR 270
+L + + +++ A N+LL + AKISDFGL++
Sbjct: 425 FLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSK 484
Query: 271 LISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQP----T 323
+ +S+ + AG + + PE K + R DV+S+GV + E L G++P
Sbjct: 485 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544
Query: 324 GPE 326
GPE
Sbjct: 545 GPE 547
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 37 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 95
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ + K+ DFGL+
Sbjct: 96 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 156 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 211
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 212 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 254
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVA--GTIGYVPPEYGGTGKATERGDVYS 308
+NI+++ K+ DFG+AR I+D + V+ A GT Y+ PE R DVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 309 FGVILLELVTGKQP 322
G +L E++TG+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVA--GTIGYVPPEYGGTGKATERGDVYS 308
+NI+++ K+ DFG+AR I+D + V+ A GT Y+ PE R DVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 309 FGVILLELVTGKQP 322
G +L E++TG+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVA--GTIGYVPPEYGGTGKATERGDVYS 308
+NI+++ K+ DFG+AR I+D + V+ A GT Y+ PE R DVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 309 FGVILLELVTGKQP 322
G +L E++TG+ P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 43/216 (19%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 108
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 109 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCG 165
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 225
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNANS 361
+ +L+ +L +++ EVL+ + ANS
Sbjct: 226 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 261
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 42 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 100
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ + K+ DFGL+
Sbjct: 101 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 161 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 216
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 217 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 259
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 170 GKTVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYC--SVDEEKLLVYEYMVK 226
G+ VAVK L G R + E++ L + H+++++ G C + LV EY+
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 227 GSLDDWLRNQAASLDW-----GKRCK--------------IVASNILLNDDFEAKISDFG 267
GSL D+L + L + C+ + A N+LL++D KI DFG
Sbjct: 120 GSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFG 179
Query: 268 LARLISDCESHVSTVVAG--TIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
LA+ + + G + + PE K DV+SFGV L EL+T
Sbjct: 180 LAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 32/189 (16%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
GK VAVK + +Q ++ E+ + ++ H N+V+L ++ LV EY G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + IV A N+LL+ D KI+DFG
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 268 LARLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ + + + T G+ Y PE + G DV+S GVIL LV+G P
Sbjct: 159 FSNEFT-FGNKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--- 213
Query: 327 FEDKDGENL 335
DG+NL
Sbjct: 214 ----DGQNL 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 32/189 (16%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
GK VAVK + +Q ++ E+ + ++ H N+V+L ++ LV EY G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + IV A N+LL+ D KI+DFG
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 268 LARLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ + + + T G+ Y PE + G DV+S GVIL LV+G P
Sbjct: 159 FSNEFT-FGNKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--- 213
Query: 327 FEDKDGENL 335
DG+NL
Sbjct: 214 ----DGQNL 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
GK VAVK + +Q ++ E+ + ++ H N+V+L ++ LV EY G
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 91
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + IV A N+LL+ D KI+DFG
Sbjct: 92 EVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 151
Query: 268 LARLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ + G+ Y PE + G DV+S GVIL LV+G P
Sbjct: 152 FSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--- 206
Query: 327 FEDKDGENL 335
DG+NL
Sbjct: 207 ----DGQNL 211
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVA--GTIGYVPPEYGGTGKATERGDVYS 308
+NI+++ K+ DFG+AR I+D + V+ A GT Y+ PE R DVYS
Sbjct: 162 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 221
Query: 309 FGVILLELVTGKQP 322
G +L E++TG+ P
Sbjct: 222 LGCVLYEVLTGEPP 235
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCG 168
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 229 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 102/252 (40%), Gaps = 58/252 (23%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK ++++ +R EF E + ++V LLG S + L+V E M G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ DF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 169
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T D++SFGV+L E+
Sbjct: 170 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
+ +QP ++ E ++ +V+ +Q D N + T L + C
Sbjct: 226 TSLAEQP----YQGLSNEQVLKFVMDGGYLDQPD--------NCPERVTDLMRM-----C 268
Query: 376 ISNDPTVRPTML 387
+P +RPT L
Sbjct: 269 WQFNPKMRPTFL 280
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 53/244 (21%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK ++++ +R EF E + ++V LLG S + L+V E M G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ DF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 169
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + G G +P PE G T D++SFGV+L E+
Sbjct: 170 KIGDFGMTRDIXETDXXRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAV--------LNANSKPTMLK 367
+ +QP ++ E ++ +V+ +Q D + N N +PT L+
Sbjct: 226 TSLAEQP----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 368 MLQI 371
++ +
Sbjct: 282 IVNL 285
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRN---------- 235
+ + E+E ++H N++ L GY L+ EY +G + L+
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 236 -------QAASLDWGKRC---KIVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
A S KR I N+LL E KI+DFG + S + G
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXG 173
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 233
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 234 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVY 307
I A+N+LL++ E K++DFG+A ++D + + V GT ++ PE + D++
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADIW 188
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN-SKPTML 366
S G+ +EL G+ P LH MK +P L N SKP
Sbjct: 189 SLGITAIELARGEPPHSE--------------LHPMKVLFLIPKNNPPTLEGNYSKP--- 231
Query: 367 KMLQIATGCISNDPTVRPT 385
+ + C++ +P+ RPT
Sbjct: 232 -LKEFVEACLNKEPSFRPT 249
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVY 307
I A+N+LL++ E K++DFG+A ++D + + V GT ++ PE + D++
Sbjct: 145 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADIW 203
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN-SKPTML 366
S G+ +EL G+ P LH MK +P L N SKP
Sbjct: 204 SLGITAIELARGEPPHSE--------------LHPMKVLFLIPKNNPPTLEGNYSKP--- 246
Query: 367 KMLQIATGCISNDPTVRPT 385
+ + C++ +P+ RPT
Sbjct: 247 -LKEFVEACLNKEPSFRPT 264
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 102/252 (40%), Gaps = 58/252 (23%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK ++++ +R EF E + ++V LLG S + L+V E M G L
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 108
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ DF
Sbjct: 109 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 168
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + + G G +P PE G T D++SFGV+L E+
Sbjct: 169 KIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
+ +QP ++ E ++ +V+ +Q D N + T L + C
Sbjct: 225 TSLAEQP----YQGLSNEQVLKFVMDGGYLDQPD--------NCPERVTDLMRM-----C 267
Query: 376 ISNDPTVRPTML 387
+P +RPT L
Sbjct: 268 WQFNPKMRPTFL 279
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCG 173
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 233
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 234 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 50/194 (25%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMV----KHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
VAVK L + +RE A M L M+ H+N+V LLG C++ L++EY G
Sbjct: 78 VAVKMLKEKADSSERE--ALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 229 LDDWLRNQ--------------------------------------AASLDW--GKRC-- 246
L ++LR++ A +++ K C
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH 195
Query: 247 -KIVASNILLNDDFEAKISDFGLAR-LISDCESHVSTVVAGTIGYVPPEYGGTGKATERG 304
+ A N+L+ KI DFGLAR ++SD V + ++ PE G T +
Sbjct: 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS 255
Query: 305 DVYSFGVILLELVT 318
DV+S+G++L E+ +
Sbjct: 256 DVWSYGILLWEIFS 269
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCG 169
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 229
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 230 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI++FG + S T + G
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCG 170
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 230
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 231 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCG 168
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 229 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S T + G
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCG 168
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 229 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 98
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ + K+ DFGL+
Sbjct: 99 SFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 159 RYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 214
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 215 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 257
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 32/189 (16%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
GK VAVK + +Q ++ E+ + ++ H N+V+L ++ LV EY G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + IV A N+LL+ D KI+DFG
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 268 LARLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ + G Y PE + G DV+S GVIL LV+G P
Sbjct: 159 FSNEFTFGNK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--- 213
Query: 327 FEDKDGENL 335
DG+NL
Sbjct: 214 ----DGQNL 218
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 32/189 (16%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
G+ VAVK + +Q ++ E+ + ++ H N+V+L ++ LV EY G
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG 99
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + IV A N+LL+ D KI+DFG
Sbjct: 100 EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFG 159
Query: 268 LARLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ + + + T G+ Y PE + G DV+S GVIL LV+G P
Sbjct: 160 FSNEFT-VGNKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--- 214
Query: 327 FEDKDGENL 335
DG+NL
Sbjct: 215 ----DGQNL 219
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 58/252 (23%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK ++++ +R EF E + ++V LLG S + L+V E M G L
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ DF
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 166
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + G G +P PE G T D++SFGV+L E+
Sbjct: 167 KIGDFGMTRDIXETDXXRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
+ +QP ++ E ++ +V+ +Q D N + T L + C
Sbjct: 223 TSLAEQP----YQGLSNEQVLKFVMDGGYLDQPD--------NCPERVTDLMRM-----C 265
Query: 376 ISNDPTVRPTML 387
+P +RPT L
Sbjct: 266 WQFNPKMRPTFL 277
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL + E KI+DFG + S T + G
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCG 172
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + G P T P+F
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF 232
Query: 328 EDKDGENLVDWVLHMMKNEQAD--EVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 233 VTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI++FG + S T + G
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCG 171
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 232 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S + G
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCG 171
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 232 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 58/252 (23%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK ++++ +R EF E + ++V LLG S + L+V E M G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ DF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 169
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + G G +P PE G T D++SFGV+L E+
Sbjct: 170 KIGDFGMTRDIYETAYYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
+ +QP ++ E ++ +V+ +Q D N + T L + C
Sbjct: 226 TSLAEQP----YQGLSNEQVLKFVMDGGYLDQPD--------NCPERVTDLMRM-----C 268
Query: 376 ISNDPTVRPTML 387
+P +RPT L
Sbjct: 269 WQFNPKMRPTFL 280
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 29/172 (16%)
Query: 171 KTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
K V +L Q D E L +V H ++ + G ++ ++ +Y+ G L
Sbjct: 40 KKEIVVRLKQVEHTND-----ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELF 94
Query: 231 DWLR------NQAASLDWGKRC--------------KIVASNILLNDDFEAKISDFGLAR 270
LR N A + C + NILL+ + KI+DFG A+
Sbjct: 95 SLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK 154
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ D V+ + GT Y+ PE T + D +SFG+++ E++ G P
Sbjct: 155 YVPD----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 32/189 (16%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
GK VAV+ + +Q ++ E+ + ++ H N+V+L ++ LV EY G
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + IV A N+LL+ D KI+DFG
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 268 LARLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ + + + T G+ Y PE + G DV+S GVIL LV+G P
Sbjct: 159 FSNEFT-FGNKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--- 213
Query: 327 FEDKDGENL 335
DG+NL
Sbjct: 214 ----DGQNL 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 32/189 (16%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
G+ VA+K + +Q ++ E+ + ++ H N+V+L ++ L+ EY G
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 96
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + +IV A N+LL+ D KI+DFG
Sbjct: 97 EVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG 156
Query: 268 LARLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ + + T G+ Y PE + G DV+S GVIL LV+G P
Sbjct: 157 FSNEFT-VGGKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--- 211
Query: 327 FEDKDGENL 335
DG+NL
Sbjct: 212 ----DGQNL 216
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 63/261 (24%)
Query: 173 VAVKKLSQATGQGDRE-FAAEMETLGMV-KHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VAVK L ++E +E++ + + +H+N+V LLG C+ L++ EY G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 231 DWLRNQA-----ASLDWG-----------------------------------KRC---K 247
++LR +A SL G K C
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRD 183
Query: 248 IVASNILLNDDFEAKISDFGLAR-LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
+ A N+LL + AKI DFGLAR +++D V + ++ PE T + DV
Sbjct: 184 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 243
Query: 307 YSFGVILLELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTM 365
+S+G++L E+ + G P + LV + ++ PA N
Sbjct: 244 WSYGILLWEIFSLGLNPYPGILVNSKFYKLV---------KDGYQMAQPAFAPKN----- 289
Query: 366 LKMLQIATGCISNDPTVRPTM 386
+ I C + +PT RPT
Sbjct: 290 --IYSIMQACWALEPTHRPTF 308
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 420 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 478
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ + K+ DFGL+
Sbjct: 479 SFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 594
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 595 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 637
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 54/250 (21%)
Query: 173 VAVK--KLSQATGQGDREFAAEMETLGMVKHQNLVELLGYC-----SVDEEKLLVYEYMV 225
VAVK KL ++ + EF +E + H N++ LLG C + +++ +M
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 226 KGSLDDWLRNQAASLDWGKRC----------------------------KIVASNILLND 257
G L +L + L+ G + + A N +L D
Sbjct: 125 YGDLHTYL--LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD 182
Query: 258 DFEAKISDFGLARLISDCESHVSTVVAGT-IGYVPPEYGGTGKATERGDVYSFGVILLEL 316
D ++DFGL++ I + + +A + ++ E T + DV++FGV + E+
Sbjct: 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
Query: 317 VTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCI 376
T P ++ + + D++LH + +Q ++ LD ++ +I C
Sbjct: 243 ATRGMTPYPGVQNHE---MYDYLLHGHRLKQPEDCLD-------------ELYEIMYSCW 286
Query: 377 SNDPTVRPTM 386
DP RPT
Sbjct: 287 RTDPLDRPTF 296
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 58/252 (23%)
Query: 173 VAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK ++++ +R EF E + ++V LLG S + L+V E M G L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 232 WLR----------------------------NQAASLDWGKRCK--IVASNILLNDDFEA 261
+LR + A L+ K + A N ++ DF
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 169
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVP-----PEYGGTGKATERGDVYSFGVILLEL 316
KI DFG+ R I + + G G +P PE G T D++SFGV+L E+
Sbjct: 170 KIGDFGMTRDIXETDXXRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 317 VT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGC 375
+ +QP ++ E ++ +V+ +Q D N + T L + C
Sbjct: 226 TSLAEQP----YQGLSNEQVLKFVMDGGYLDQPD--------NCPERVTDLMRM-----C 268
Query: 376 ISNDPTVRPTML 387
+P +RPT L
Sbjct: 269 WQFNPKMRPTFL 280
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 57/253 (22%)
Query: 169 DGKTVAVKKLSQATGQGD-------REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
D VA+K L +G+ +EF E+ + + H N+V+L G + +V
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL--MHNPPRMVM 100
Query: 222 EYMVKGSLDDWLRNQAASLDWGKRCKIV-----------------------ASNILL--- 255
E++ G L L ++A + W + +++ + NI L
Sbjct: 101 EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSL 160
Query: 256 --NDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKA--TERGDVYSFGV 311
N AK++DFGL S H + + G ++ PE G + TE+ D YSF +
Sbjct: 161 DENAPVCAKVADFGL----SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI 371
IL ++TG+ P D+ + ++ N +E L P + + P + ++++
Sbjct: 217 ILYTILTGEGPF-----DEYSYGKIKFI-----NMIREEGLRPTI-PEDCPPRLRNVIEL 265
Query: 372 ATGCISNDPTVRP 384
C S DP RP
Sbjct: 266 ---CWSGDPKKRP 275
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S + G
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCG 168
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 229 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 98
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ K+ DFGL+
Sbjct: 99 SFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 159 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 214
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 215 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 257
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S + G
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCG 169
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 229
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 230 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
GK VAVKK+ Q E+ + +H+N+VE+ V +E +V E++ G+L
Sbjct: 54 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 230 DDWLRN----------------QAASLDWGK---RCKIVASNILLNDDFEAKISDFGLAR 270
D + + QA S+ + I + +ILL D K+SDFG
Sbjct: 114 TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 173
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+S E + GT ++ PE D++S G++++E+V G+ P
Sbjct: 174 QVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
GK VAVKK+ Q E+ + +H+N+VE+ V +E +V E++ G+L
Sbjct: 45 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 230 DDWLRN----------------QAASLDWGK---RCKIVASNILLNDDFEAKISDFGLAR 270
D + + QA S+ + I + +ILL D K+SDFG
Sbjct: 105 TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+S E + GT ++ PE D++S G++++E+V G+ P
Sbjct: 165 QVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S + G
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCG 170
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 230
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 231 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+ LNDD + KI DFGLA I + + + GT Y+ PE + D++S G
Sbjct: 172 NLFLNDDMDVKIGDFGLATKI-EFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGC 230
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI 371
IL L+ GK P FE L + + + KNE + P +N + + +ML
Sbjct: 231 ILYTLLVGKPP----FET---SCLKETYIRIKKNEYS----VPRHINPVASALIRRMLH- 278
Query: 372 ATGCISNDPTVRPTM 386
DPT+RP++
Sbjct: 279 ------ADPTLRPSV 287
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
GK VAVKK+ Q E+ + +H+N+VE+ V +E +V E++ G+L
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 230 DDWLRN----------------QAASLDWGK---RCKIVASNILLNDDFEAKISDFGLAR 270
D + + QA S+ + I + +ILL D K+SDFG
Sbjct: 116 TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 175
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+S E + GT ++ PE D++S G++++E+V G+ P
Sbjct: 176 QVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
GK VAVKK+ Q E+ + +H+N+VE+ V +E +V E++ G+L
Sbjct: 49 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 108
Query: 230 DDWLRN----------------QAASLDWGK---RCKIVASNILLNDDFEAKISDFGLAR 270
D + + QA S+ + I + +ILL D K+SDFG
Sbjct: 109 TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 168
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+S E + GT ++ PE D++S G++++E+V G+ P
Sbjct: 169 QVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S + G
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCG 168
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 229 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
GK VAVKK+ Q E+ + +H+N+VE+ V +E +V E++ G+L
Sbjct: 176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 230 DDWLRN----------------QAASLDWGK---RCKIVASNILLNDDFEAKISDFGLAR 270
D + + QA S+ + I + +ILL D K+SDFG
Sbjct: 236 TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+S E + GT ++ PE D++S G++++E+V G+ P
Sbjct: 296 QVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+ LNDD + KI DFGLA I + + + GT Y+ PE + D++S G
Sbjct: 172 NLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGC 230
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI 371
IL L+ GK P FE L + + + KNE + P +N + + +ML
Sbjct: 231 ILYTLLVGKPP----FET---SCLKETYIRIKKNEYS----VPRHINPVASALIRRMLH- 278
Query: 372 ATGCISNDPTVRPTM 386
DPT+RP++
Sbjct: 279 ------ADPTLRPSV 287
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
GK VAVKK+ Q E+ + +H+N+VE+ V +E +V E++ G+L
Sbjct: 99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 230 DDWLRN----------------QAASLDWGK---RCKIVASNILLNDDFEAKISDFGLAR 270
D + + QA S+ + I + +ILL D K+SDFG
Sbjct: 159 TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+S E + GT ++ PE D++S G++++E+V G+ P
Sbjct: 219 QVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 46/196 (23%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
G+ VA+K + +Q ++ E+ + ++ H N+V+L ++ L+ EY G
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + +IV A N+LL+ D KI+DFG
Sbjct: 100 EVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG 159
Query: 268 LA-------RLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTG 319
+ +L + C G Y PE + G DV+S GVIL LV+G
Sbjct: 160 FSNEFTVGGKLDAFC---------GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
Query: 320 KQPTGPEFEDKDGENL 335
P DG+NL
Sbjct: 211 SLPF-------DGQNL 219
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 29/190 (15%)
Query: 174 AVKKLSQATGQGDREFAAEME--TLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSL- 229
A+K L +AT + +ME L V H +V+L Y E KL L+ +++ G L
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF 114
Query: 230 --------------DDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
+L A +LD I+ NILL+++ K++DFGL++
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDK 330
D E + GT+ Y+ PE T+ D +SFGV++ E++TG P F+ K
Sbjct: 175 ESIDHEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP----FQGK 229
Query: 331 DGENLVDWVL 340
D + + +L
Sbjct: 230 DRKETMTMIL 239
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
GK VAV+ + +Q ++ E+ + ++ H N+V+L ++ LV EY G
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + IV A N+LL+ D KI+DFG
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 268 LARLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ + + G+ Y PE + G DV+S GVIL LV+G P
Sbjct: 159 FSNEFTF--GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--- 213
Query: 327 FEDKDGENL 335
DG+NL
Sbjct: 214 ----DGQNL 218
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 29/190 (15%)
Query: 174 AVKKLSQATGQGDREFAAEME--TLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSL- 229
A+K L +AT + +ME L V H +V+L Y E KL L+ +++ G L
Sbjct: 57 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF 115
Query: 230 --------------DDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
+L A +LD I+ NILL+++ K++DFGL++
Sbjct: 116 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 175
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDK 330
D E + GT+ Y+ PE T+ D +SFGV++ E++TG P F+ K
Sbjct: 176 ESIDHEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP----FQGK 230
Query: 331 DGENLVDWVL 340
D + + +L
Sbjct: 231 DRKETMTMIL 240
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 29/190 (15%)
Query: 174 AVKKLSQATGQGDREFAAEME--TLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGSL- 229
A+K L +AT + +ME L V H +V+L Y E KL L+ +++ G L
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF 114
Query: 230 --------------DDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
+L A +LD I+ NILL+++ K++DFGL++
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDK 330
D E + GT+ Y+ PE T+ D +SFGV++ E++TG P F+ K
Sbjct: 175 ESIDHEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP----FQGK 229
Query: 331 DGENLVDWVL 340
D + + +L
Sbjct: 230 DRKETMTMIL 239
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 173 VAVK--KLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLL--------VYE 222
VAVK K+ T + + F E+ L +H N++ +GY + D ++ +Y+
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYK 120
Query: 223 YM-VKGS------LDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
++ V+ + L D R A +D+ I+ ++NI L++ KI DFGLA
Sbjct: 121 HLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT 180
Query: 271 LISDCE-SHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQP 322
+ S S G++ ++ PE + + DVYS+G++L EL+TG+ P
Sbjct: 181 VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 41/236 (17%)
Query: 172 TVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
VA+K T RE F E T+ H ++V+L+G + + ++ E G L
Sbjct: 420 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 478
Query: 231 DWLRNQAASLDWG------------------KRC---KIVASNILLNDDFEAKISDFGLA 269
+L+ + SLD KR I A N+L++ K+ DFGL+
Sbjct: 479 SFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE-LVTGKQPTGPEFE 328
R + D + ++ I ++ PE + T DV+ FGV + E L+ G +P F+
Sbjct: 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQ 594
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
+++ + E + + P N PT+ ++ T C + DP+ RP
Sbjct: 595 GVKNNDVIGRI------ENGERLPMP----PNCPPTLYSLM---TKCWAYDPSRRP 637
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 43/216 (19%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S + G
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCG 171
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNANS 361
+ +L+ +L +++ EVL+ + ANS
Sbjct: 232 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 23/192 (11%)
Query: 169 DGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
D VAVK + + +F E L H N+V L+G C+ + +V E + G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 228 SLDDWLRNQAASLDWGKRCKIV---------------------ASNILLNDDFEAKISDF 266
+LR + A L ++V A N L+ + KISDF
Sbjct: 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDF 257
Query: 267 GLARLISDCESHVSTVVAGT-IGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
G++R +D S + + + PE G+ + DV+SFG++L E + P
Sbjct: 258 GMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP 317
Query: 326 EFEDKDGENLVD 337
++ V+
Sbjct: 318 NLSNQQTREFVE 329
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 192 EMETLGMVKHQNLVELLGYCSVDEEKLLV-YEYMVKGSLDDWLRNQAASLDWGKR---CK 247
E + + + H V+L +C D+EKL Y G L ++R + + R +
Sbjct: 87 ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 248 IVAS-----------------NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGY 289
IV++ NILLN+D +I+DFG A+++S + + + GT Y
Sbjct: 146 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 290 VPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
V PE A + D+++ G I+ +LV G P
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 28/143 (19%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVY 307
I A+N+LL++ + K++DFG+A ++D + +T V GT ++ PE + D++
Sbjct: 146 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKADIW 204
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML- 366
S G+ +EL G+ P +H M+ VL ++ N+ PT++
Sbjct: 205 SLGITAIELAKGEPPNSD--------------MHPMR------VL--FLIPKNNPPTLVG 242
Query: 367 ----KMLQIATGCISNDPTVRPT 385
+ C++ DP+ RPT
Sbjct: 243 DFTKSFKEFIDACLNKDPSFRPT 265
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
G+ VA+++++ E+ + K+ N+V L V +E +V EY+ GSL
Sbjct: 46 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 230 DDWL--------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
D + R +L++ +++ + NILL D K++DFG
Sbjct: 106 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCA 165
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I+ +S ST+V GT ++ PE + D++S G++ +E++ G+ P
Sbjct: 166 QITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 57/253 (22%)
Query: 169 DGKTVAVKKLSQATGQGD-------REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
D VA+K L +G+ +EF E+ + + H N+V+L G + +V
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL--MHNPPRMVM 100
Query: 222 EYMVKGSLDDWLRNQAASLDWGKRCKIV-----------------------ASNILL--- 255
E++ G L L ++A + W + +++ + NI L
Sbjct: 101 EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSL 160
Query: 256 --NDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKA--TERGDVYSFGV 311
N AK++DFG S H + + G ++ PE G + TE+ D YSF +
Sbjct: 161 DENAPVCAKVADFG----TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI 371
IL ++TG+ P D+ + ++ N +E L P + + P + ++++
Sbjct: 217 ILYTILTGEGPF-----DEYSYGKIKFI-----NMIREEGLRPTI-PEDCPPRLRNVIEL 265
Query: 372 ATGCISNDPTVRP 384
C S DP RP
Sbjct: 266 ---CWSGDPKKRP 275
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 23/192 (11%)
Query: 169 DGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
D VAVK + + +F E L H N+V L+G C+ + +V E + G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 228 SLDDWLRNQAASLDWGKRCKIV---------------------ASNILLNDDFEAKISDF 266
+LR + A L ++V A N L+ + KISDF
Sbjct: 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDF 257
Query: 267 GLARLISDCESHVSTVVAGT-IGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
G++R +D S + + + PE G+ + DV+SFG++L E + P
Sbjct: 258 GMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP 317
Query: 326 EFEDKDGENLVD 337
++ V+
Sbjct: 318 NLSNQQTREFVE 329
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
G+ VA+++++ E+ + K+ N+V L V +E +V EY+ GSL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 230 DDWL--------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
D + R +L++ +++ + NILL D K++DFG
Sbjct: 105 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I+ +S ST+V GT ++ PE + D++S G++ +E++ G+ P
Sbjct: 165 QITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+ LNDD + KI DFGLA I + + + GT Y+ PE + D++S G
Sbjct: 156 NLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGC 214
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI 371
IL L+ GK P FE L + + + KNE + P +N + + +ML
Sbjct: 215 ILYTLLVGKPP----FET---SCLKETYIRIKKNEYS----VPRHINPVASALIRRMLH- 262
Query: 372 ATGCISNDPTVRPTM 386
DPT+RP++
Sbjct: 263 ------ADPTLRPSV 271
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+ LNDD + KI DFGLA I + + + GT Y+ PE + D++S G
Sbjct: 172 NLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGC 230
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI 371
IL L+ GK P FE L + + + KNE + P +N + + +ML
Sbjct: 231 ILYTLLVGKPP----FET---SCLKETYIRIKKNEYS----VPRHINPVASALIRRMLH- 278
Query: 372 ATGCISNDPTVRPTM 386
DPT+RP++
Sbjct: 279 ------ADPTLRPSV 287
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRN---------- 235
+ + E+E ++H N++ L GY L+ EY G++ L+
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 236 -------QAASLDWGKRC---KIVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
A S KR I N+LL E KI+DFG + S + G
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCG 194
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 254
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 255 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL E KI+DFG + S + G
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCG 171
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + GK P T P+F
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 328 EDKDGENLVDWVLHMMKNEQA--DEVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 232 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 32/189 (16%)
Query: 170 GKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
GK VAVK + +Q ++ E+ ++ H N+V+L ++ LV EY G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG 98
Query: 228 SLDDWL---------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+ D+L R +++ + + IV A N+LL+ D KI+DFG
Sbjct: 99 EVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFG 158
Query: 268 LARLISDCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
+ + + G Y PE + G DV+S GVIL LV+G P
Sbjct: 159 FSNEFT--FGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--- 213
Query: 327 FEDKDGENL 335
DG+NL
Sbjct: 214 ----DGQNL 218
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 168 PD-GKTVAVKKLSQATGQGDREFAAEME--TLGMVKHQNLVELLGYCSVDEEKL-LVYEY 223
PD G A+K L +AT + +ME L V H +V+L Y E KL L+ ++
Sbjct: 53 PDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL-HYAFQTEGKLYLILDF 111
Query: 224 MVKGSL---------------DDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKI 263
+ G L +L A LD I+ NILL+++ K+
Sbjct: 112 LRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKL 171
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPT 323
+DFGL++ D E + GT+ Y+ PE + D +S+GV++ E++TG P
Sbjct: 172 TDFGLSKEAIDHEKKAYSF-CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP- 229
Query: 324 GPEFEDKDGENLVDWVL 340
F+ KD + + +L
Sbjct: 230 ---FQGKDRKETMTLIL 243
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 173 VAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK + ++E F +E + + H ++V+L+G +E ++ E G L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGH 97
Query: 232 WLRNQAASLDWG-------KRCK--------------IVASNILLNDDFEAKISDFGLAR 270
+L SL + CK I NIL+ K+ DFGL+R
Sbjct: 98 YLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 157
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFED 329
I D + + ++V I ++ PE + T DV+ F V + E+++ GKQP E+
Sbjct: 158 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF-WLEN 216
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
KD ++ E+ D + P + P +L L T C DP+ RP
Sbjct: 217 KDVIGVL---------EKGDRLPKPDLC-----PPVLYTLM--TRCWDYDPSDRP 255
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 186 DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL---------------D 230
+ + E+E ++H N++ L GY L+ EY G++
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 231 DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG 285
++ A +L + +++ N+LL + E KI+DFG + S + G
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCG 172
Query: 286 TIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP------------------TGPEF 327
T+ Y+PPE E+ D++S GV+ E + G P T P+F
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF 232
Query: 328 EDKDGENLVDWVLHMMKNEQAD--EVLDPAVLNAN-SKPT 364
+ +L+ +L +++ EVL+ + AN SKP+
Sbjct: 233 VTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 57/253 (22%)
Query: 169 DGKTVAVKKLSQATGQGD-------REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
D VA+K L +G+ +EF E+ + + H N+V+L G + +V
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL--MHNPPRMVM 100
Query: 222 EYMVKGSLDDWLRNQAASLDWGKRCKIV-----------------------ASNILL--- 255
E++ G L L ++A + W + +++ + NI L
Sbjct: 101 EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSL 160
Query: 256 --NDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKA--TERGDVYSFGV 311
N AK++DF L S H + + G ++ PE G + TE+ D YSF +
Sbjct: 161 DENAPVCAKVADFSL----SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI 371
IL ++TG+ P D+ + ++ N +E L P + + P + ++++
Sbjct: 217 ILYTILTGEGPF-----DEYSYGKIKFI-----NMIREEGLRPTI-PEDCPPRLRNVIEL 265
Query: 372 ATGCISNDPTVRP 384
C S DP RP
Sbjct: 266 ---CWSGDPKKRP 275
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 173 VAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK + ++E F +E + + H ++V+L+G +E ++ E G L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGH 113
Query: 232 WLRNQAASLDWG-------KRCK--------------IVASNILLNDDFEAKISDFGLAR 270
+L SL + CK I NIL+ K+ DFGL+R
Sbjct: 114 YLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 173
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFED 329
I D + + ++V I ++ PE + T DV+ F V + E+++ GKQP E+
Sbjct: 174 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF-WLEN 232
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
KD ++ E+ D + P + P +L L T C DP+ RP
Sbjct: 233 KDVIGVL---------EKGDRLPKPDLC-----PPVLYTLM--TRCWDYDPSDRP 271
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 37/189 (19%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 228 SLDDWLRNQ---------------------AASLDWGKRCKIVAS-----------NILL 255
+L +LR++ S K + +AS NILL
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 177
Query: 256 NDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILL 314
++ KI DFGLAR I +V A + ++ PE T + DV+SFGV+L
Sbjct: 178 SEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 315 ELVT-GKQP 322
E+ + G P
Sbjct: 238 EIFSLGASP 246
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 45/229 (19%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEK--LLVYEYM 224
G+ VAVKK+ Q + R F M + H+N+V LL D ++ LV++YM
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93
Query: 225 -------VKGSLDDWLRNQAASLDWGKRCKIV-----------ASNILLNDDFEAKISDF 266
++ ++ + + Q K K + SNILLN + K++DF
Sbjct: 94 ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADF 153
Query: 267 GLARLIS--------------------DCESHVSTVVAGTIGYVPPE-YGGTGKATERGD 305
GL+R D + + T T Y PE G+ K T+ D
Sbjct: 154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGID 213
Query: 306 VYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDP 354
++S G IL E++ GK P P + + V+ NE + + P
Sbjct: 214 MWSLGCILGEILCGK-PIFPGSSTMNQLERIIGVIDFPSNEDVESIQSP 261
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 37/189 (19%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 228 SLDDWLRNQ---------------------AASLDWGKRCKIVAS-----------NILL 255
+L +LR++ S K + +AS NILL
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILL 177
Query: 256 NDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILL 314
++ KI DFGLAR I +V A + ++ PE T + DV+SFGV+L
Sbjct: 178 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 315 ELVT-GKQP 322
E+ + G P
Sbjct: 238 EIFSLGASP 246
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 173 VAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
VAVK + ++E F +E + + H ++V+L+G +E ++ E G L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGH 101
Query: 232 WLRNQAASLDWG-------KRCK--------------IVASNILLNDDFEAKISDFGLAR 270
+L SL + CK I NIL+ K+ DFGL+R
Sbjct: 102 YLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 161
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQPTGPEFED 329
I D + + ++V I ++ PE + T DV+ F V + E+++ GKQP E+
Sbjct: 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF-WLEN 220
Query: 330 KDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRP 384
KD ++ E+ D + P + P +L L T C DP+ RP
Sbjct: 221 KDVIGVL---------EKGDRLPKPDLC-----PPVLYTLM--TRCWDYDPSDRP 259
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 41/193 (21%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 228 SLDDWLRNQ-------------------------------AASLDW--GKRC---KIVAS 251
+L +LR++ A +++ ++C + A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL++ KI DFGLAR I +V A + ++ PE T + DV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 311 VILLELVT-GKQP 322
V+L E+ + G P
Sbjct: 238 VLLWEIFSLGASP 250
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 170 GKTVAVKKLS-QATGQGDREFAA-EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+K++ A +G A E+ L + H N+V L+ + LV+E+M
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD 104
Query: 225 VKGSLDD------------WLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+K LD+ +L + + +I+ N+L+N D K++DFG
Sbjct: 105 LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFG 164
Query: 268 LARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
LAR S+ VV T+ Y P+ G+ K + D++S G I E++TGK P P
Sbjct: 165 LARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK-PLFP 221
Query: 326 EFEDKD 331
D D
Sbjct: 222 GVTDDD 227
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 170 GKTVAVKKLS-QATGQGDREFAA-EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+K++ A +G A E+ L + H N+V L+ + LV+E+M
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD 104
Query: 225 VKGSLDD------------WLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+K LD+ +L + + +I+ N+L+N D K++DFG
Sbjct: 105 LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFG 164
Query: 268 LARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
LAR S+ VV T+ Y P+ G+ K + D++S G I E++TGK P P
Sbjct: 165 LARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK-PLFP 221
Query: 326 EFEDKD 331
D D
Sbjct: 222 GVTDDD 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 42/240 (17%)
Query: 170 GKTVAVKKLSQAT-GQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
G+ VA+K + + T G E+E L ++HQ++ +L + +V EY G
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94
Query: 229 LDDWLRNQAASLDWGKRC---KIVAS-----------------NILLNDDFEAKISDFGL 268
L D++ +Q + R +IV++ N+L ++ + K+ DFGL
Sbjct: 95 LFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154
Query: 269 -ARLISDCESHVSTVVAGTIGYVPPEY-GGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
A+ + + H+ T G++ Y PE G DV+S G++L L+ G P
Sbjct: 155 CAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP---- 209
Query: 327 FEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
F+D D V+ + K + P L+ +S + +MLQ+ DP R +M
Sbjct: 210 FDD-------DNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQV-------DPKKRISM 255
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 41/193 (21%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 228 SLDDWLRNQ-------------------------------AASLDW--GKRC---KIVAS 251
+L +LR++ A +++ ++C + A
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 179
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL++ KI DFGLAR I +V A + ++ PE T + DV+SFG
Sbjct: 180 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 239
Query: 311 VILLELVT-GKQP 322
V+L E+ + G P
Sbjct: 240 VLLWEIFSLGASP 252
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 41/193 (21%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLVY-EYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 228 SLDDWLRNQ-------------------------------AASLDW--GKRC---KIVAS 251
+L +LR++ A +++ ++C + A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL++ KI DFGLAR I +V A + ++ PE T + DV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 311 VILLELVT-GKQP 322
V+L E+ + G P
Sbjct: 229 VLLWEIFSLGASP 241
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 41/193 (21%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 228 SLDDWLRNQ-------------------------------AASLDW--GKRC---KIVAS 251
+L +LR++ A +++ ++C + A
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 214
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL++ KI DFGLAR I +V A + ++ PE T + DV+SFG
Sbjct: 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 274
Query: 311 VILLELVT-GKQP 322
V+L E+ + G P
Sbjct: 275 VLLWEIFSLGASP 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 42/252 (16%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P + VA+K+++ Q E E++ + H N+V V +E LV + +
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 227 GSLDDWLRNQAAS-------LDWGKRCKIV---------------------ASNILLNDD 258
GS+ D +++ A LD I+ A NILL +D
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 152
Query: 259 FEAKISDFGLARLISD----CESHVSTVVAGTIGYVPPEYGGTGKATE-RGDVYSFGVIL 313
+I+DFG++ ++ + V GT ++ PE + + + D++SFG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 314 LELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIAT 373
+EL TG P + ++ L V D +L K + KM+ +
Sbjct: 213 IELATGAAP----YHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK-SFRKMISL-- 265
Query: 374 GCISNDPTVRPT 385
C+ DP RPT
Sbjct: 266 -CLQKDPEKRPT 276
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 41/193 (21%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLVY-EYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 228 SLDDWLRNQ-------------------------------AASLDW--GKRC---KIVAS 251
+L +LR++ A +++ ++C + A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL++ KI DFGLAR I +V A + ++ PE T + DV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 311 VILLELVT-GKQP 322
V+L E+ + G P
Sbjct: 229 VLLWEIFSLGASP 241
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 42/252 (16%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P + VA+K+++ Q E E++ + H N+V V +E LV + +
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 227 GSLDDWLRNQAAS-------LDWGKRCKIV---------------------ASNILLNDD 258
GS+ D +++ A LD I+ A NILL +D
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 157
Query: 259 FEAKISDFGLARLISD----CESHVSTVVAGTIGYVPPEYGGTGKATE-RGDVYSFGVIL 313
+I+DFG++ ++ + V GT ++ PE + + + D++SFG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 314 LELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIAT 373
+EL TG P + ++ L V D +L K + KM+ +
Sbjct: 218 IELATGAAP----YHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK-SFRKMISL-- 270
Query: 374 GCISNDPTVRPT 385
C+ DP RPT
Sbjct: 271 -CLQKDPEKRPT 281
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 40/192 (20%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 228 SLDDWLRNQ------------------------------AASLDW--GKRC---KIVASN 252
+L +LR++ A +++ ++C + A N
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178
Query: 253 ILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGV 311
ILL++ KI DFGLAR I V A + ++ PE T + DV+SFGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 312 ILLELVT-GKQP 322
+L E+ + G P
Sbjct: 239 LLWEIFSLGASP 250
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A++ D+++ G
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALG 221
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALG 219
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 220 CIIYQLVAGLPP 231
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 208 LGYCSVDEEKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIVASNILLNDDFEAKISDFG 267
+G E + + Y + L+D R + D + NILL+D +ISD G
Sbjct: 278 MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD------LKPENILLDDHGHIRISDLG 331
Query: 268 LARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
LA + + ++ V GT+GY+ PE + T D ++ G +L E++ G+ P
Sbjct: 332 LAVHVPEGQTIKGRV--GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 208 LGYCSVDEEKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIVASNILLNDDFEAKISDFG 267
+G E + + Y + L+D R + D + NILL+D +ISD G
Sbjct: 278 MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD------LKPENILLDDHGHIRISDLG 331
Query: 268 LARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
LA + + ++ V GT+GY+ PE + T D ++ G +L E++ G+ P
Sbjct: 332 LAVHVPEGQTIKGRV--GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 139 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 198
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 199 CIIYQLVAGLPP 210
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 138 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 197
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 198 CIIYQLVAGLPP 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 171 KTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEY------- 223
K + K L+++ QG E E+ L +++H ++++L +E ++V EY
Sbjct: 35 KIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 92
Query: 224 -------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARL 271
M + + + +++++ R KIV N+LL++ KI+DFGL+ +
Sbjct: 93 YIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 152
Query: 272 ISDCESHVSTVVAGTIGYVPPEY-GGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
++D + G+ Y PE G A DV+S GVIL ++ + P E
Sbjct: 153 MTD--GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 137 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 196
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 197 CIIYQLVAGLPP 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 30/175 (17%)
Query: 192 EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM---VKGSLDD------------WLRNQ 236
E+ L +KH N+V L ++ LV+EY+ +K LDD +L
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQL 109
Query: 237 AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYV 290
L + R K++ N+L+N+ E K++DFGLAR S +++ + VV T+ Y
Sbjct: 110 LRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYR 167
Query: 291 PPE--YGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
PP+ G T +T+ D++ G I E+ TG+ P F E + ++ ++
Sbjct: 168 PPDILLGSTDYSTQI-DMWGVGCIFYEMATGR----PLFPGSTVEEQLHFIFRIL 217
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 140 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 199
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 200 CIIYQLVAGLPP 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 144 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 203
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 204 CIIYQLVAGLPP 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 171 KTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEY------- 223
K + K L+++ QG E E+ L +++H ++++L +E ++V EY
Sbjct: 45 KIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 102
Query: 224 -------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARL 271
M + + + +++++ R KIV N+LL++ KI+DFGL+ +
Sbjct: 103 YIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 162
Query: 272 ISDCESHVSTVVAGTIGYVPPEY-GGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
++D + G+ Y PE G A DV+S GVIL ++ + P E
Sbjct: 163 MTD--GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 216
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 159 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 218
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 219 CIIYQLVAGLPP 230
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 41/193 (21%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 228 SLDDWLRNQ-------------------------------AASLDW--GKRC---KIVAS 251
+L +LR++ A +++ ++C + A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL++ KI DFGLAR I V A + ++ PE T + DV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 311 VILLELVT-GKQP 322
V+L E+ + G P
Sbjct: 238 VLLWEIFSLGASP 250
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 221
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 171 KTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEY------- 223
K + K L+++ QG E E+ L +++H ++++L +E ++V EY
Sbjct: 39 KIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 96
Query: 224 -------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARL 271
M + + + +++++ R KIV N+LL++ KI+DFGL+ +
Sbjct: 97 YIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 156
Query: 272 ISDCESHVSTVVAGTIGYVPPEY-GGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
++D + G+ Y PE G A DV+S GVIL ++ + P E
Sbjct: 157 MTD--GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 171 KTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEY------- 223
K + K L+++ QG E E+ L +++H ++++L +E ++V EY
Sbjct: 44 KIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 101
Query: 224 -------MVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARL 271
M + + + +++++ R KIV N+LL++ KI+DFGL+ +
Sbjct: 102 YIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161
Query: 272 ISDCESHVSTVVAGTIGYVPPEY-GGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
++D + G+ Y PE G A DV+S GVIL ++ + P E
Sbjct: 162 MTD--GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 219
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 220 CIIYQLVAGLPP 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALG 221
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 219
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 220 CIIYQLVAGLPP 231
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
G+ VA+++++ E+ + K+ N+V L V +E +V EY+ GSL
Sbjct: 46 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 230 DDWL--------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
D + R +L++ +++ + NILL D K++DFG
Sbjct: 106 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 165
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I+ +S S +V GT ++ PE + D++S G++ +E++ G+ P
Sbjct: 166 QITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 219
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 220 CIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 221
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 159 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALG 218
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 219 CIIYQLVAGLPP 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 163 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 222
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 223 CIIYQLVAGLPP 234
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
G+ VA+++++ E+ + K+ N+V L V +E +V EY+ GSL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 230 DDWL--------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
D + R +L++ +++ + NILL D K++DFG
Sbjct: 105 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I+ +S S +V GT ++ PE + D++S G++ +E++ G+ P
Sbjct: 165 QITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 221
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 28/143 (19%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVY 307
I A+N+LL++ + K++DFG+A ++D + + V GT ++ PE + D++
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKADIW 200
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTM-- 365
S G+ +EL G+ P LH M+ VL ++ NS PT+
Sbjct: 201 SLGITAIELAKGEPPNSD--------------LHPMR------VL--FLIPKNSPPTLEG 238
Query: 366 ---LKMLQIATGCISNDPTVRPT 385
+ C++ DP RPT
Sbjct: 239 QHSKPFKEFVEACLNKDPRFRPT 261
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 221
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 222 CIIYQLVAGLPP 233
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 41/193 (21%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 228 SLDDWLRNQ-------------------------------AASLDW--GKRC---KIVAS 251
+L +LR++ A +++ ++C + A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL++ KI DFGLAR I V A + ++ PE T + DV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 311 VILLELVT-GKQP 322
V+L E+ + G P
Sbjct: 229 VLLWEIFSLGASP 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 41/193 (21%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 228 SLDDWLRNQ-------------------------------AASLDW--GKRC---KIVAS 251
+L +LR++ A +++ ++C + A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL++ KI DFGLAR I V A + ++ PE T + DV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 311 VILLELVT-GKQP 322
V+L E+ + G P
Sbjct: 238 VLLWEIFSLGASP 250
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 41/193 (21%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLVY-EYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 228 SLDDWLRNQ-------------------------------AASLDW--GKRC---KIVAS 251
+L +LR++ A +++ ++C + A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFG 310
NILL++ KI DFGLAR I V A + ++ PE T + DV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 311 VILLELVT-GKQP 322
V+L E+ + G P
Sbjct: 229 VLLWEIFSLGASP 241
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 165 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALG 224
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 225 CIIYQLVAGLPP 236
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
G+ VA+++++ E+ + K+ N+V L V +E +V EY+ GSL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 230 DDWL--------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLAR 270
D + R +L++ +++ + NILL D K++DFG
Sbjct: 105 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I+ +S S +V GT ++ PE + D++S G++ +E++ G+ P
Sbjct: 165 QITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 252 NILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
NILLN+D +I+DFG A+++S + + + GT YV PE A + D+++ G
Sbjct: 163 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALG 222
Query: 311 VILLELVTGKQP 322
I+ +LV G P
Sbjct: 223 CIIYQLVAGLPP 234
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 51/219 (23%)
Query: 171 KTVAVKKLS-QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
+ VA+K L +A G EF E ++H N+V LLG + D+ +++ Y G L
Sbjct: 57 QAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116
Query: 230 DDWL---------------RNQAASLDWGKRCKIVAS---------------------NI 253
++L R ++L+ +VA N+
Sbjct: 117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNV 176
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAGT---IGYVPPEYGGTGKATERGDVYSFG 310
L+ D KISD GL R + + + ++ + I ++ PE GK + D++S+G
Sbjct: 177 LVYDKLNVKISDLGLFREVYAADYY--KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 234
Query: 311 VILLELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQA 348
V+L E+ + G QP + ++D V+ M++N Q
Sbjct: 235 VVLWEVFSYGLQPYC-GYSNQD-------VVEMIRNRQV 265
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 83/191 (43%), Gaps = 39/191 (20%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 228 SLDDWLRNQ-----------------------AASLDWGKRCKIVAS-----------NI 253
+L +LR++ S K + +AS NI
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNI 179
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVI 312
LL++ KI DFGLAR I V A + ++ PE T + DV+SFGV+
Sbjct: 180 LLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 313 LLELVT-GKQP 322
L E+ + G P
Sbjct: 240 LWEIFSLGASP 250
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 38 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 96
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 97 QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 156
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 210
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 211 WELMTFGSKP 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 60/257 (23%)
Query: 171 KTVAVKKLS-QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
+ VA+K L +A G EF E ++H N+V LLG + D+ +++ Y G L
Sbjct: 40 QAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
Query: 230 DDWL---------------RNQAASLDWGKRCKIVAS---------------------NI 253
++L R ++L+ +VA N+
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNV 159
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTVVAGT---IGYVPPEYGGTGKATERGDVYSFG 310
L+ D KISD GL R + + + ++ + I ++ PE GK + D++S+G
Sbjct: 160 LVYDKLNVKISDLGLFREVYAADYY--KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 217
Query: 311 VILLELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML 369
V+L E+ + G QP + ++D V+ M++N Q D P + L
Sbjct: 218 VVLWEVFSYGLQPYC-GYSNQD-------VVEMIRNRQVLPCPDDC-------PAWVYAL 262
Query: 370 QIATGCISNDPTVRPTM 386
I C + P+ RP
Sbjct: 263 MIE--CWNEFPSRRPRF 277
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 41 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 99
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 100 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 159
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 160 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 213
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 214 WELMTFGSKP 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 38 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 96
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 97 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 156
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 157 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 210
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 211 WELMTFGSKP 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 95
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 155
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 210 WELMTFGSKP 219
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 98
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 158
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 213 WELMTFGSKP 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 97
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 157
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 212 WELMTFGSKP 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 95
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 155
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 210 WELMTFGSKP 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 252 NILLNDDFEAKISDFGLAR--LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSF 309
NILL+ D KI+DFG+ + ++ D ++ GT Y+ PE K D +SF
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDAKT---NXFCGTPDYIAPEILLGQKYNHSVDWWSF 204
Query: 310 GVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML 369
GV+L E++ G+ P F +D E L + + D P L +K ++K+
Sbjct: 205 GVLLYEMLIGQSP----FHGQDEEELFHSI-------RMDNPFYPRWLEKEAKDLLVKLF 253
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 47 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 105
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 106 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 165
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 166 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 219
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 220 WELMTFGSKP 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 102
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 162
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 217 WELMTFGSKP 226
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
+A+K++ + + + E+ +KH+N+V+ LG S + + E + GSL
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 109
Query: 233 LRNQAASLDWGKRC------------KIVASNILLNDDFEA------------KISDFGL 268
LR++ L ++ K + N +++ D + KISDFG
Sbjct: 110 LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT 169
Query: 269 ARLISDCESHVSTVVAGTIGYVPPEY-----GGTGKATERGDVYSFGVILLELVTGKQP 322
++ ++ T GT+ Y+ PE G GKA D++S G ++E+ TGK P
Sbjct: 170 SKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYGKAA---DIWSLGCTIIEMATGKPP 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 31 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 89
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 90 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 149
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 150 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 203
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 204 WELMTFGSKP 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 95
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 96 QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 155
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 210 WELMTFGSKP 219
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 95
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 155
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 210 WELMTFGSKP 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 97
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 157
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 158 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 212 WELMTFGSKP 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 24/146 (16%)
Query: 199 VKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAASLDWGK-------------- 244
+KH +++EL Y LV E G ++ +L+N+ +
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 245 -------RCKIVASNILLNDDFEAKISDFGLA-RLISDCESHVSTVVAGTIGYVPPEYGG 296
+ SN+LL + KI+DFGLA +L E H + + GT Y+ PE
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIAT 185
Query: 297 TGKATERGDVYSFGVILLELVTGKQP 322
DV+S G + L+ G+ P
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 98
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 158
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 213 WELMTFGSKP 222
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 95
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 155
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 156 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 210 WELMTFGSKP 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 78/206 (37%), Gaps = 41/206 (19%)
Query: 168 PDGKTVAVKK-------LSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLV 220
P GKTV+V LSQ D F E+ + + H+NL+ L G K+ V
Sbjct: 32 PSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-V 88
Query: 221 YEYMVKGSLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDF 259
E GSL D LR G + + A N+LL
Sbjct: 89 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD 148
Query: 260 EAKISDFGLARLISDCESHVSTVVAGTIGYV--PPEYGGTGKATERGDVYSFGVILLELV 317
KI DFGL R + + H + + PE T + D + FGV L E+
Sbjct: 149 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208
Query: 318 T-GKQP----TGPEFE---DKDGENL 335
T G++P G + DK+GE L
Sbjct: 209 TYGQEPWIGLNGSQILHKIDKEGERL 234
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 34 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 92
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 93 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQH 152
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 153 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 206
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 207 WELMTFGSKP 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 98
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 158
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 213 WELMTFGSKP 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 102
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 162
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 217 WELMTFGSKP 226
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 78/206 (37%), Gaps = 41/206 (19%)
Query: 168 PDGKTVAVKK-------LSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLV 220
P GKTV+V LSQ D F E+ + + H+NL+ L G K+ V
Sbjct: 32 PSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-V 88
Query: 221 YEYMVKGSLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDF 259
E GSL D LR G + + A N+LL
Sbjct: 89 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD 148
Query: 260 EAKISDFGLARLISDCESHVSTVVAGTIGYV--PPEYGGTGKATERGDVYSFGVILLELV 317
KI DFGL R + + H + + PE T + D + FGV L E+
Sbjct: 149 LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208
Query: 318 T-GKQP----TGPEFE---DKDGENL 335
T G++P G + DK+GE L
Sbjct: 209 TYGQEPWIGLNGSQILHKIDKEGERL 234
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 43 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 101
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 102 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 161
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 162 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 215
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 216 WELMTFGSKP 225
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 98
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 158
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 159 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 212
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 213 WELMTFGSKP 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 78/206 (37%), Gaps = 41/206 (19%)
Query: 168 PDGKTVAVKK-------LSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLV 220
P GKTV+V LSQ D F E+ + + H+NL+ L G K+ V
Sbjct: 36 PSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-V 92
Query: 221 YEYMVKGSLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDF 259
E GSL D LR G + + A N+LL
Sbjct: 93 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD 152
Query: 260 EAKISDFGLARLISDCESHVSTVVAGTIGYV--PPEYGGTGKATERGDVYSFGVILLELV 317
KI DFGL R + + H + + PE T + D + FGV L E+
Sbjct: 153 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 212
Query: 318 T-GKQP----TGPEFE---DKDGENL 335
T G++P G + DK+GE L
Sbjct: 213 TYGQEPWIGLNGSQILHKIDKEGERL 238
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 102
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 162
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 163 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 217 WELMTFGSKP 226
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 78/206 (37%), Gaps = 41/206 (19%)
Query: 168 PDGKTVAVKK-------LSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLV 220
P GKTV+V LSQ D F E+ + + H+NL+ L G K+ V
Sbjct: 36 PSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-V 92
Query: 221 YEYMVKGSLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDF 259
E GSL D LR G + + A N+LL
Sbjct: 93 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD 152
Query: 260 EAKISDFGLARLISDCESHVSTVVAGTIGYV--PPEYGGTGKATERGDVYSFGVILLELV 317
KI DFGL R + + H + + PE T + D + FGV L E+
Sbjct: 153 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 212
Query: 318 T-GKQP----TGPEFE---DKDGENL 335
T G++P G + DK+GE L
Sbjct: 213 TYGQEPWIGLNGSQILHKIDKEGERL 238
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 78/206 (37%), Gaps = 41/206 (19%)
Query: 168 PDGKTVAVKK-------LSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLV 220
P GKTV+V LSQ D F E+ + + H+NL+ L G K+ V
Sbjct: 32 PSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-V 88
Query: 221 YEYMVKGSLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDF 259
E GSL D LR G + + A N+LL
Sbjct: 89 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD 148
Query: 260 EAKISDFGLARLISDCESHVSTVVAGTIGYV--PPEYGGTGKATERGDVYSFGVILLELV 317
KI DFGL R + + H + + PE T + D + FGV L E+
Sbjct: 149 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208
Query: 318 T-GKQP----TGPEFE---DKDGENL 335
T G++P G + DK+GE L
Sbjct: 209 TYGQEPWIGLNGSQILHKIDKEGERL 234
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 35/195 (17%)
Query: 169 DGKTVAVKKL--SQATGQGDREFAAEMETLGMVKHQNLVE-------------LLGYCS- 212
DG+ +K++ S+ + + E E+ L +KH N+V+ ++ YC
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 213 ------VDEEKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEA 261
++ +K ++++ + + DW +L KI+ + NI L D
Sbjct: 108 GDLFKRINAQKGVLFQ---EDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTV 164
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQ 321
++ DFG+AR++ + ++ GT Y+ PE + D+++ G +L EL T K
Sbjct: 165 QLGDFGIARVL-NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
Query: 322 PTGPEFEDKDGENLV 336
FE +NLV
Sbjct: 224 ----AFEAGSMKNLV 234
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
GK VAVKK+ Q E+ + H N+V++ V +E +V E++ G+L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 230 DD------------------------WLRNQAASLDWGKRCKIVASNILLNDDFEAKISD 265
D +L NQ I + +ILL D K+SD
Sbjct: 130 TDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVI-----HRDIKSDSILLTSDGRIKLSD 184
Query: 266 FGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
FG +S E + GT ++ PE D++S G++++E++ G+ P
Sbjct: 185 FGFCAQVSK-EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 62 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 120
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 121 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 180
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 181 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 234
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 235 WELMTFGSKP 244
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
+A+K++ + + + E+ +KH+N+V+ LG S + + E + GSL
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 95
Query: 233 LRNQAASLDWGKRC------------KIVASNILLNDDFEA------------KISDFGL 268
LR++ L ++ K + N +++ D + KISDFG
Sbjct: 96 LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT 155
Query: 269 ARLISDCESHVSTVVAGTIGYVPPEY-----GGTGKATERGDVYSFGVILLELVTGKQP 322
++ ++ T GT+ Y+ PE G GKA D++S G ++E+ TGK P
Sbjct: 156 SKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYGKAA---DIWSLGCTIIEMATGKPP 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 252 NILLNDDFEAKISDFGLAR--LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSF 309
NILL+ D KI+DFG+ + ++ D ++ GT Y+ PE K D +SF
Sbjct: 149 NILLDKDGHIKIADFGMCKENMLGDAKT---NEFCGTPDYIAPEILLGQKYNHSVDWWSF 205
Query: 310 GVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML 369
GV+L E++ G+ P F +D E L + + D P L +K ++K+
Sbjct: 206 GVLLYEMLIGQSP----FHGQDEEELFHSI-------RMDNPFYPRWLEKEAKDLLVKLF 254
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 78/206 (37%), Gaps = 41/206 (19%)
Query: 168 PDGKTVAVKK-------LSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLV 220
P GKTV+V LSQ D F E+ + + H+NL+ L G K+ V
Sbjct: 42 PSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-V 98
Query: 221 YEYMVKGSLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDF 259
E GSL D LR G + + A N+LL
Sbjct: 99 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD 158
Query: 260 EAKISDFGLARLISDCESHVSTVVAGTIGYV--PPEYGGTGKATERGDVYSFGVILLELV 317
KI DFGL R + + H + + PE T + D + FGV L E+
Sbjct: 159 LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 218
Query: 318 T-GKQP----TGPEFE---DKDGENL 335
T G++P G + DK+GE L
Sbjct: 219 TYGQEPWIGLNGSQILHKIDKEGERL 244
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 78/206 (37%), Gaps = 41/206 (19%)
Query: 168 PDGKTVAVKK-------LSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLV 220
P GKTV+V LSQ D F E+ + + H+NL+ L G K+ V
Sbjct: 42 PSGKTVSVAVKCLKPDVLSQPEAMDD--FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-V 98
Query: 221 YEYMVKGSLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDF 259
E GSL D LR G + + A N+LL
Sbjct: 99 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD 158
Query: 260 EAKISDFGLARLISDCESHVSTVVAGTIGYV--PPEYGGTGKATERGDVYSFGVILLELV 317
KI DFGL R + + H + + PE T + D + FGV L E+
Sbjct: 159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 218
Query: 318 T-GKQP----TGPEFE---DKDGENL 335
T G++P G + DK+GE L
Sbjct: 219 TYGQEPWIGLNGSQILHKIDKEGERL 244
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 99/256 (38%), Gaps = 45/256 (17%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEY---M 224
G+ VA+KK ++ + A E+ L +KH NLV LL LV+EY
Sbjct: 28 GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87
Query: 225 VKGSLDDWLRN--------------QAASLDWGKRC---KIVASNILLNDDFEAKISDFG 267
V LD + R QA + C + NIL+ K+ DFG
Sbjct: 88 VLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFG 147
Query: 268 LARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEF 327
ARL++ + VA P G + DV++ G + EL++G P P
Sbjct: 148 FARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGK 206
Query: 328 EDKDGENLVDWVLH--MMKNEQAD---------EVLDPAVLNANSKPTMLKMLQIA---- 372
D D L+ L + +++Q ++ DP + +P LK I+
Sbjct: 207 SDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDP----EDMEPLELKFPNISYPAL 262
Query: 373 ---TGCISNDPTVRPT 385
GC+ DPT R T
Sbjct: 263 GLLKGCLHMDPTERLT 278
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+PDG+ V A+K L + T + ++E E + V + LLG C +L V
Sbjct: 39 IPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VT 97
Query: 222 EYMVKGSLDD----------------WLRNQAASLDWGKRCKIV-----ASNILLNDDFE 260
+ M G L D W A + + + ++V A N+L+
Sbjct: 98 QLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNH 157
Query: 261 AKISDFGLARL--ISDCESHVSTVVAGTIGYVPPEYGG-----TGKATERGDVYSFGVIL 313
KI+DFGLARL I + E H G VP ++ + T + DV+S+GV +
Sbjct: 158 VKITDFGLARLLDIDETEYHADG------GKVPIKWMALESILRRRFTHQSDVWSYGVTV 211
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 212 WELMTFGAKP 221
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 170 GKTVAVKKLSQATGQGD-REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
G+ VA+K Q + D +E E+ + ++V+ G + + +V EY GS
Sbjct: 54 GQIVAIK---QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGS 110
Query: 229 LDDWLRNQAASLDWGKRCKIV---------------------ASNILLNDDFEAKISDFG 267
+ D +R + +L + I+ A NILLN + AK++DFG
Sbjct: 111 VSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFG 170
Query: 268 LARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+A ++D + + V+ GT ++ PE D++S G+ +E+ GK P
Sbjct: 171 VAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT--IGYVPPEYGGTGKATERGD 305
+ A N+LL AKISDFGL++ + E++ G + + PE K + + D
Sbjct: 143 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 202
Query: 306 VYSFGVILLELVT-GKQP 322
V+SFGV++ E + G++P
Sbjct: 203 VWSFGVLMWEAFSYGQKP 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT--IGYVPPEYGGTGKATERGD 305
+ A N+LL AKISDFGL++ + E++ G + + PE K + + D
Sbjct: 131 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 190
Query: 306 VYSFGVILLELVT-GKQP 322
V+SFGV++ E + G++P
Sbjct: 191 VWSFGVLMWEAFSYGQKP 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT--IGYVPPEYGGTGKATERGD 305
+ A N+LL AKISDFGL++ + E++ G + + PE K + + D
Sbjct: 133 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 192
Query: 306 VYSFGVILLELVT-GKQP 322
V+SFGV++ E + G++P
Sbjct: 193 VWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT--IGYVPPEYGGTGKATERGD 305
+ A N+LL AKISDFGL++ + E++ G + + PE K + + D
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 196
Query: 306 VYSFGVILLELVT-GKQP 322
V+SFGV++ E + G++P
Sbjct: 197 VWSFGVLMWEAFSYGQKP 214
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 36/152 (23%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIVAS--------- 251
H N+++L + LV++ M KG L D+L + +L + KI+ +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 141
Query: 252 ------------NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPE------ 293
NILL+DD K++DFG + + E S V GT Y+ PE
Sbjct: 142 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGTPSYLAPEIIECSM 199
Query: 294 ---YGGTGKATERGDVYSFGVILLELVTGKQP 322
+ G GK D++S GVI+ L+ G P
Sbjct: 200 NDNHPGYGKEV---DMWSTGVIMYTLLAGSPP 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT--IGYVPPEYGGTGKATERGD 305
+ A N+LL AKISDFGL++ + E++ G + + PE K + + D
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 212
Query: 306 VYSFGVILLELVT-GKQP 322
V+SFGV++ E + G++P
Sbjct: 213 VWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT--IGYVPPEYGGTGKATERGD 305
+ A N+LL AKISDFGL++ + E++ G + + PE K + + D
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 212
Query: 306 VYSFGVILLELVT-GKQP 322
V+SFGV++ E + G++P
Sbjct: 213 VWSFGVLMWEAFSYGQKP 230
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 31/197 (15%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKG 227
G+ VA+KK ++ + A E++ L ++H+NLV LL C + LV+E++
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109
Query: 228 SLDDWLRNQAASLDWGKRCK---------------------IVASNILLNDDFEAKISDF 266
LDD L LD+ K I NIL++ K+ DF
Sbjct: 110 ILDD-LELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDF 168
Query: 267 GLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
G AR ++ VA P G K + DV++ G ++ E+ G +P P
Sbjct: 169 GFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG-EPLFP- 226
Query: 327 FEDKDGENLVDWVLHMM 343
G++ +D + H+M
Sbjct: 227 -----GDSDIDQLYHIM 238
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT--IGYVPPEYGGTGKATERGD 305
+ A N+LL AKISDFGL++ + E++ G + + PE K + + D
Sbjct: 151 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 210
Query: 306 VYSFGVILLELVT-GKQP 322
V+SFGV++ E + G++P
Sbjct: 211 VWSFGVLMWEAFSYGQKP 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 41 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 99
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 100 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 159
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFG A+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 160 VKITDFGRAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 213
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 214 WELMTFGSKP 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+ +L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 71 IPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 129
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 130 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 189
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFGLA+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 190 VKITDFGLAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 243
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 244 WELMTFGSKP 253
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 170 GKTVAVKKLSQATGQGD------REFAAEMETLGMVKHQNLVELLGYCSVD----EEKL- 218
G+ VA+K++ TG+ RE A + L +H N+V L C+V E KL
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95
Query: 219 LVYEYMVKG----------------SLDDWLRNQAASLDWGKRCKIV-----ASNILLND 257
LV+E++ + ++ D + LD+ ++V NIL+
Sbjct: 96 LVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS 155
Query: 258 DFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELV 317
+ K++DFGLAR+ S + S VV T+ Y PE D++S G I E+
Sbjct: 156 SGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Query: 318 TGK 320
K
Sbjct: 214 RRK 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 43/168 (25%)
Query: 192 EMETLGMVKHQNLVELLGY----CSVDEEKLLVYEYMVKGSLDDWLRNQAASLDWGKRCK 247
E+ +L +KH+N+++ +G SVD + L+ + KGSL D+L+ S W + C
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS--WNELCH 125
Query: 248 IV-------------------------------ASNILLNDDFEAKISDFGLARLISDCE 276
I + N+LL ++ A I+DFGLA +
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 277 SHVSTV-VAGTIGYVPPEY--GGTG---KATERGDVYSFGVILLELVT 318
S T GT Y+ PE G A R D+Y+ G++L EL +
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 34/151 (22%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAASLDWGKRC-------------- 246
H +++ L+ LV++ M KG L D+L + A + R
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 247 ------KIVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPE------- 293
+ NILL+D+ + ++SDFG + + E + GT GY+ PE
Sbjct: 219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMD 276
Query: 294 --YGGTGKATERGDVYSFGVILLELVTGKQP 322
+ G GK D+++ GVIL L+ G P
Sbjct: 277 ETHPGYGKEV---DLWACGVILFTLLAGSPP 304
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 97
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 157
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFG A+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 212 WELMTFGSKP 221
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 188 EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQ----------- 236
E AE + + + +V ++G C E +LV E G L+ +L+
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 475
Query: 237 ----AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT- 286
+ + + + V A N+LL AKISDFGL++ + E++ G
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 287 -IGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+ + PE K + + DV+SFGV++ E + G++P
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L++
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM- 97
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 157
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFG A+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 212 WELMTFGSKP 221
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 188 EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQ----------- 236
E AE + + + +V ++G C E +LV E G L+ +L+
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 474
Query: 237 ----AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT- 286
+ + + + V A N+LL AKISDFGL++ + E++ G
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 287 -IGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+ + PE K + + DV+SFGV++ E + G++P
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 95
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 155
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFG A+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 156 VKITDFGRAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 209
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 210 WELMTFGSKP 219
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 41/190 (21%)
Query: 167 MPDGKTV----AVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ V A+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 97
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 157
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFG A+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 158 VKITDFGRAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 211
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 212 WELMTFGSKP 221
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 170 GKTVAVKKLSQATGQGD------REFAAEMETLGMVKHQNLVELLGYCSVD----EEKL- 218
G+ VA+K++ TG+ RE A + L +H N+V L C+V E KL
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95
Query: 219 LVYEYMVKG----------------SLDDWLRNQAASLDWGKRCKIV-----ASNILLND 257
LV+E++ + ++ D + LD+ ++V NIL+
Sbjct: 96 LVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS 155
Query: 258 DFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELV 317
+ K++DFGLAR+ S + S VV T+ Y PE D++S G I E+
Sbjct: 156 SGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Query: 318 TGK 320
K
Sbjct: 214 RRK 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 37/193 (19%)
Query: 170 GKTVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVEL------LGYCSVDEEKLLVYE 222
G+ VA+K+ Q +RE + E++ + + H N+V L + ++ LL E
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98
Query: 223 YMVKGSLDDWLRNQAASL-------------DWGKRCKIVASNILLNDDFEA-------- 261
Y G L +L NQ + D + + N +++ D +
Sbjct: 99 YCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 157
Query: 262 ------KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE 315
KI D G A+ + E + T GT+ Y+ PE K T D +SFG + E
Sbjct: 158 PQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215
Query: 316 LVTGKQPTGPEFE 328
+TG +P P ++
Sbjct: 216 CITGFRPFLPNWQ 228
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 37/193 (19%)
Query: 170 GKTVAVKKLSQATGQGDRE-FAAEMETLGMVKHQNLVEL------LGYCSVDEEKLLVYE 222
G+ VA+K+ Q +RE + E++ + + H N+V L + ++ LL E
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 99
Query: 223 YMVKGSLDDWLRNQAASL-------------DWGKRCKIVASNILLNDDFEA-------- 261
Y G L +L NQ + D + + N +++ D +
Sbjct: 100 YCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 158
Query: 262 ------KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE 315
KI D G A+ + E + T GT+ Y+ PE K T D +SFG + E
Sbjct: 159 PQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 216
Query: 316 LVTGKQPTGPEFE 328
+TG +P P ++
Sbjct: 217 CITGFRPFLPNWQ 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 30/195 (15%)
Query: 170 GKTVAVKKLSQATGQG-DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
GK AVK + + +G + E+ L +KH+N+V L LV + + G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 229 LDD---------------WLRNQAASLDWGKRCKIVASNI------LLNDDFEAKI--SD 265
L D +R ++ + R IV ++ + D E+KI SD
Sbjct: 107 LFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISD 166
Query: 266 FGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
FGL+++ + + V + GT GYV PE ++ D +S GVI L+ G P
Sbjct: 167 FGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP--- 221
Query: 326 EFEDKDGENLVDWVL 340
F D++ L + +L
Sbjct: 222 -FYDENDSKLFEQIL 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 36/215 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA-EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM---V 225
G VA+K++ + +G A E+ + +KH+N+V L + + LV+E+M +
Sbjct: 30 GVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDL 89
Query: 226 KGSLD-------------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEA 261
K +D W Q L + KI+ N+L+N +
Sbjct: 90 KKYMDSRTVGNTPRGLELNLVKYFQWQLLQG--LAFCHENKILHRDLKPQNLLINKRGQL 147
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQ 321
K+ DFGLAR + S+ V P G+ + D++S G IL E++TGK
Sbjct: 148 KLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK- 206
Query: 322 PTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAV 356
P F + E + + +M +E L P+V
Sbjct: 207 ---PLFPGTNDEEQLKLIFDIMGT--PNESLWPSV 236
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 170 GKTVAVKKLSQATGQGD------REFAAEMETLGMVKHQNLVELLGYCSVD----EEKL- 218
G+ VA+K++ TG+ RE A + L +H N+V L C+V E KL
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95
Query: 219 LVYEYMVKG----------------SLDDWLRNQAASLDWGKRCKIV-----ASNILLND 257
LV+E++ + ++ D + LD+ ++V NIL+
Sbjct: 96 LVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS 155
Query: 258 DFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELV 317
+ K++DFGLAR+ S + S VV T+ Y PE D++S G I E+
Sbjct: 156 SGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Query: 318 TGK 320
K
Sbjct: 214 RRK 216
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATE-RGDVYSF 309
+NILL++ +ISD GLA S + H S GT GY+ PE G A + D +S
Sbjct: 321 ANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 310 GVILLELVTGKQP 322
G +L +L+ G P
Sbjct: 378 GCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATE-RGDVYSF 309
+NILL++ +ISD GLA S + H S GT GY+ PE G A + D +S
Sbjct: 321 ANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 310 GVILLELVTGKQP 322
G +L +L+ G P
Sbjct: 378 GCMLFKLLRGHSP 390
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 41/190 (21%)
Query: 167 MPDGK----TVAVKKLSQATG-QGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVY 221
+P+G+ VA+K+L +AT + ++E E + V + ++ LLG C +L+
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 102
Query: 222 EYMVKGSLDDWLRNQAAS------LDWGKRCK---------------IVASNILLNDDFE 260
+ M G L D++R + L+W + + A N+L+
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 162
Query: 261 AKISDFGLARLI--SDCESHVSTVVAGTIGYVPPEYGGTGKA-----TERGDVYSFGVIL 313
KI+DFG A+L+ + E H G VP ++ T + DV+S+GV +
Sbjct: 163 VKITDFGRAKLLGAEEKEYHAEG------GKVPIKWMALESILHRIYTHQSDVWSYGVTV 216
Query: 314 LELVT-GKQP 322
EL+T G +P
Sbjct: 217 WELMTFGSKP 226
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATE-RGDVYSF 309
+NILL++ +ISD GLA S + H S GT GY+ PE G A + D +S
Sbjct: 321 ANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 310 GVILLELVTGKQP 322
G +L +L+ G P
Sbjct: 378 GCMLFKLLRGHSP 390
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 31/196 (15%)
Query: 170 GKTVAVKKLSQA----TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMV 225
GK A+K L +A + AE L VKH +V+L+ + L+ EY+
Sbjct: 45 GKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLS 104
Query: 226 KGSLDDWLRNQAASLDWGKRCKIVAS---------------------NILLNDDFEAKIS 264
G L L + ++ C +A NI+LN K++
Sbjct: 105 GGELFMQLEREGIFME-DTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLT 163
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTG 324
DFGL + S + V+ GTI Y+ PE D +S G ++ +++TG
Sbjct: 164 DFGLCKE-SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG----A 218
Query: 325 PEFEDKDGENLVDWVL 340
P F ++ + +D +L
Sbjct: 219 PPFTGENRKKTIDKIL 234
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATE-RGDVYSF 309
+NILL++ +ISD GLA S + H S GT GY+ PE G A + D +S
Sbjct: 320 ANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSL 376
Query: 310 GVILLELVTGKQP 322
G +L +L+ G P
Sbjct: 377 GCMLFKLLRGHSP 389
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT--IGYVPPEYGGTGKATERGD 305
+ A N+LL AKISDFGL++ + E+ G + + PE K + + D
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSD 196
Query: 306 VYSFGVILLELVT-GKQP 322
V+SFGV++ E + G++P
Sbjct: 197 VWSFGVLMWEAFSYGQKP 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
GK A+K + ++ D E+ L +KH+N+V L LV + + G L
Sbjct: 34 GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93
Query: 230 DDWLRNQA------ASLDWGK---RCKIVASNILLNDDFEAK--------------ISDF 266
D + + ASL + K + N +++ D + + I+DF
Sbjct: 94 FDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDF 153
Query: 267 GLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
GL+++ ++ + + GT GYV PE ++ D +S GVI L+ G P E
Sbjct: 154 GLSKM---EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210
Query: 327 FEDKDGENL 335
E K E +
Sbjct: 211 TESKLFEKI 219
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 24/165 (14%)
Query: 179 SQATGQG-DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQ- 236
SQ +G + + E+E ++H N++ + Y + L+ E+ +G L L+
Sbjct: 50 SQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG 109
Query: 237 --------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCES 277
A +L + K++ N+L+ E KI+DFG + S
Sbjct: 110 RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPS 166
Query: 278 HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ GT+ Y+PPE E+ D++ GV+ E + G P
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 36/152 (23%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIVAS--------- 251
H N+++L + LV++ M KG L D+L + +L + KI+ +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 128
Query: 252 ------------NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPE------ 293
NILL+DD K++DFG + + E V GT Y+ PE
Sbjct: 129 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGTPSYLAPEIIECSM 186
Query: 294 ---YGGTGKATERGDVYSFGVILLELVTGKQP 322
+ G GK D++S GVI+ L+ G P
Sbjct: 187 NDNHPGYGKEV---DMWSTGVIMYTLLAGSPP 215
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 36/152 (23%)
Query: 201 HQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIVAS--------- 251
H N+++L + LV++ M KG L D+L + +L + KI+ +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 141
Query: 252 ------------NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPE------ 293
NILL+DD K++DFG + + E V GT Y+ PE
Sbjct: 142 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGTPSYLAPEIIECSM 199
Query: 294 ---YGGTGKATERGDVYSFGVILLELVTGKQP 322
+ G GK D++S GVI+ L+ G P
Sbjct: 200 NDNHPGYGKEV---DMWSTGVIMYTLLAGSPP 228
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 24/165 (14%)
Query: 179 SQATGQG-DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQ- 236
SQ +G + + E+E ++H N++ + Y + L+ E+ +G L L+
Sbjct: 51 SQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG 110
Query: 237 --------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCES 277
A +L + K++ N+L+ E KI+DFG + S
Sbjct: 111 RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPS 167
Query: 278 HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ GT+ Y+PPE E+ D++ GV+ E + G P
Sbjct: 168 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
+N+ L+ K+ DFGLAR+++ S T V GT Y+ PE E+ D++S G
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 311 VILLELVTGKQP 322
+L EL P
Sbjct: 204 CLLYELCALMPP 215
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 24/165 (14%)
Query: 179 SQATGQG-DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQ- 236
SQ +G + + E+E ++H N++ + Y + L+ E+ +G L L+
Sbjct: 50 SQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG 109
Query: 237 --------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCES 277
A +L + K++ N+L+ E KI+DFG + S
Sbjct: 110 RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPS 166
Query: 278 HVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ GT+ Y+PPE E+ D++ GV+ E + G P
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 31/196 (15%)
Query: 170 GKTVAVKKLSQA----TGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMV 225
GK A+K L +A + AE L VKH +V+L+ + L+ EY+
Sbjct: 45 GKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLS 104
Query: 226 KGSLDDWLRNQAASLDWGKRCKIVAS---------------------NILLNDDFEAKIS 264
G L L + ++ C +A NI+LN K++
Sbjct: 105 GGELFMQLEREGIFME-DTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLT 163
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTG 324
DFGL + S + V+ GTI Y+ PE D +S G ++ +++TG
Sbjct: 164 DFGLCKE-SIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG----A 218
Query: 325 PEFEDKDGENLVDWVL 340
P F ++ + +D +L
Sbjct: 219 PPFTGENRKKTIDKIL 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
G+ VAVK + Q E+ + +H N+VE+ V EE ++ E++ G+L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 230 DDWLRN----------------QAASLDWGK---RCKIVASNILLNDDFEAKISDFGLAR 270
D + QA + + I + +ILL D K+SDFG
Sbjct: 130 TDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCA 189
Query: 271 LISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
IS +V GT ++ PE D++S G++++E+V G+ P
Sbjct: 190 QISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
SNIL+N E K+ DFG++ + D ++ GT Y+ PE + + D++S G
Sbjct: 144 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPERLQGTHYSVQSDIWSMG 200
Query: 311 VILLELVTGKQPTGP----EFEDKDGENLVD 337
+ L+EL G+ P P E E G +VD
Sbjct: 201 LSLVELAVGRYPIPPPDAKELEAIFGRPVVD 231
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATE----R 303
I SNILL+ K+ DFG++ + D S T AG Y+ PE + + R
Sbjct: 152 IKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTRDAGCRPYMAPERIDPSASRQGYDVR 209
Query: 304 GDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKP 363
DV+S G+ L EL TG+ P P++ ++ D + ++K + P + N+ +
Sbjct: 210 SDVWSLGITLYELATGRFPY-PKW-----NSVFDQLTQVVKGDP------PQLSNSEERE 257
Query: 364 TMLKMLQIATGCISNDPTVRP 384
+ C++ D + RP
Sbjct: 258 FSPSFINFVNLCLTKDESKRP 278
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 248 IVASNILLNDDFEAKISDFGLA-RLISDCESHVSTVVAGTIGYVPPEYGGTGKATE---- 302
+ SNILL++ + K+ DFG++ RL+ D S AG Y+ PE T+
Sbjct: 151 VKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS---AGCAAYMAPERIDPPDPTKPDYD 207
Query: 303 -RGDVYSFGVILLELVTGKQP 322
R DV+S G+ L+EL TG+ P
Sbjct: 208 IRADVWSLGISLVELATGQFP 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 39/182 (21%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIG---YVPPEYG-GTGKATERGDVYSFGVILLELVT 318
I DFGLAR H +AG + Y PE + D++S G I+ EL+T
Sbjct: 166 ILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 319 GK 320
G+
Sbjct: 219 GR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 39/182 (21%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIG---YVPPEYG-GTGKATERGDVYSFGVILLELVT 318
I DFGLAR H +AG + Y PE + D++S G I+ EL+T
Sbjct: 166 ILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 319 GK 320
G+
Sbjct: 219 GR 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 27/180 (15%)
Query: 170 GKTVAVKKLSQAT----GQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYM 224
GK A+K L +AT + E + L ++ + L Y E KL L+ +Y+
Sbjct: 82 GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI 141
Query: 225 VKGSLDDWLRNQ---------------AASLDWGKRCKIVA-----SNILLNDDFEAKIS 264
G L L + +L+ + I+ NILL+ + ++
Sbjct: 142 NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLT 201
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEY--GGTGKATERGDVYSFGVILLELVTGKQP 322
DFGL++ E+ + GTI Y+ P+ GG + D +S GV++ EL+TG P
Sbjct: 202 DFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 39/182 (21%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
Query: 263 ISDFGLARLISDCESHVSTVVAGTIG---YVPPEYG-GTGKATERGDVYSFGVILLELVT 318
I DFGLAR H +AG + Y PE + D++S G I+ EL+T
Sbjct: 162 ILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 319 GK 320
G+
Sbjct: 215 GR 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 29/160 (18%)
Query: 189 FAAEMETLGMVKHQNLVELLGYCSVDEEKLL--VYEYMVKGSLDDWLRNQAASLDWGK-- 244
F E + + +V+L +C+ ++K L V EYM G L + + N W K
Sbjct: 122 FWEERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFY 179
Query: 245 -----------------RCKIVASNILLNDDFEAKISDFGLARLISDCE-SHVSTVVAGT 286
+ N+LL+ K++DFG + + H T V GT
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GT 238
Query: 287 IGYVPPEY----GGTGKATERGDVYSFGVILLELVTGKQP 322
Y+ PE GG G D +S GV L E++ G P
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 187 REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA-------- 238
R E++ + ++H LV L +E+ +V + ++ G L L+
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL 119
Query: 239 -------SLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGT 286
+LD+ + +I+ NILL++ I+DF +A ++ E+ ++T +AGT
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT-MAGT 177
Query: 287 IGYVPPEYGGTGKATERG---DVYSFGVILLELVTGKQP 322
Y+ PE + K D +S GV EL+ G++P
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 172 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 46/188 (24%)
Query: 169 DGKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLG--------------YCSVD 214
DGKT +K++ + +RE A L + H N+V G S
Sbjct: 35 DGKTYVIKRVKYNNEKAEREVKA----LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90
Query: 215 EEKLLVY--EYMVKGSLDDWLRNQ-----------------AASLDWGKRCKIV-----A 250
+ K L E+ KG+L+ W+ + +D+ K++
Sbjct: 91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKP 150
Query: 251 SNILLNDDFEAKISDFGL-ARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSF 309
SNI L D + KI DFGL L +D + S GT+ Y+ PE + + D+Y+
Sbjct: 151 SNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KGTLRYMSPEQISSQDYGKEVDLYAL 207
Query: 310 GVILLELV 317
G+IL EL+
Sbjct: 208 GLILAELL 215
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 31/201 (15%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P G +A K + R + E++ L +V G D E + E+M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 227 GSLDDWLRNQAASLD--WGK--------------RCKIV-----ASNILLNDDFEAKISD 265
GSLD L+ + GK + KI+ SNIL+N E K+ D
Sbjct: 89 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148
Query: 266 FGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
FG++ + D ++ GT Y+ PE + + D++S G+ L+E+ G+ P P
Sbjct: 149 FGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
Query: 326 EFEDKDGE------NLVDWVL 340
+D L+D+++
Sbjct: 206 PDAKEDSRPPMAIFELLDYIV 226
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
NIL++ D A + DFG+A +D + GT+ Y PE AT R D+Y+
Sbjct: 164 NILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTC 223
Query: 312 ILLELVTGKQP 322
+L E +TG P
Sbjct: 224 VLYECLTGSPP 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 115
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 116 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 175
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 176 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 177 KLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRN 235
K + D+E E++T+ +++H LV L D E +++YE+M G L + + +
Sbjct: 82 KFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD 141
Query: 236 QA------ASLDWGKR-CK--------------IVASNILLNDDF--EAKISDFGLARLI 272
+ ++++ ++ CK + NI+ E K+ DFGL +
Sbjct: 142 EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 201
Query: 273 SDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDKDG 332
+S V GT + PE D++S GV+ L++G P G E +D+
Sbjct: 202 DPKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 259
Query: 333 ENL--VDW 338
N+ DW
Sbjct: 260 RNVKSCDW 267
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 186 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR +D T T Y PE + D++S G I+ EL+TG+
Sbjct: 173 ILDFGLARHTAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 162 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 192 EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAASLD--WGK----- 244
E++ L +V G D E + E+M GSLD L+ + GK
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 175
Query: 245 ---------RCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYV 290
+ KI+ SNIL+N E K+ DFG++ + D ++ GT Y+
Sbjct: 176 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYM 232
Query: 291 PPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
PE + + D++S G+ L+E+ G+ P P
Sbjct: 233 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR +D T T Y PE + D++S G I+ EL+TG+
Sbjct: 173 ILDFGLARHTAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR +D T T Y PE + D++S G I+ EL+TG+
Sbjct: 173 ILDFGLARHTAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
+N+ L+ K+ DFGLAR+++ E V GT Y+ PE E+ D++S G
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 311 VILLELVTGKQP 322
+L EL P
Sbjct: 204 CLLYELCALMPP 215
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 125 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 184
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 185 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P G +A K + R + E++ L +V G D E + E+M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 227 GSLDDWLRNQAASLD--WGK--------------RCKIV-----ASNILLNDDFEAKISD 265
GSLD L+ + GK + KI+ SNIL+N E K+ D
Sbjct: 89 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148
Query: 266 FGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
FG++ + D ++ GT Y+ PE + + D++S G+ L+E+ G+ P P
Sbjct: 149 FGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P G +A K + R + E++ L +V G D E + E+M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 227 GSLDDWLRNQAASLD--WGK--------------RCKIV-----ASNILLNDDFEAKISD 265
GSLD L+ + GK + KI+ SNIL+N E K+ D
Sbjct: 89 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148
Query: 266 FGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
FG++ + D ++ GT Y+ PE + + D++S G+ L+E+ G+ P P
Sbjct: 149 FGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P G +A K + R + E++ L +V G D E + E+M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 227 GSLDDWLRNQAASLD--WGK--------------RCKIV-----ASNILLNDDFEAKISD 265
GSLD L+ + GK + KI+ SNIL+N E K+ D
Sbjct: 89 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148
Query: 266 FGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
FG++ + D ++ GT Y+ PE + + D++S G+ L+E+ G+ P P
Sbjct: 149 FGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P G +A K + R + E++ L +V G D E + E+M
Sbjct: 29 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 88
Query: 227 GSLDDWLRNQAASLD--WGK--------------RCKIV-----ASNILLNDDFEAKISD 265
GSLD L+ + GK + KI+ SNIL+N E K+ D
Sbjct: 89 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148
Query: 266 FGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
FG++ + D ++ GT Y+ PE + + D++S G+ L+E+ G+ P P
Sbjct: 149 FGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
SNIL+N E K+ DFG++ + D ++ GT Y+ PE + + D++S G
Sbjct: 153 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 209
Query: 311 VILLELVTGKQPTG 324
+ L+E+ G+ P G
Sbjct: 210 LSLVEMAVGRYPIG 223
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 248 IVASNILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
I N++L+ D KI+DFGL + ISD + GT Y+ PE D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 307 YSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
+ GV++ E++ G+ P F ++D E L + +L +E+ P L+ +K
Sbjct: 189 WGLGVVMYEMMCGRLP----FYNQDHERLFELIL-------MEEIRFPRTLSPEAK---- 233
Query: 367 KMLQIATGCISNDPTVR 383
+ G + DP R
Sbjct: 234 ---SLLAGLLKKDPKQR 247
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 177 KLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRN 235
K + D+E E++T+ +++H LV L D E +++YE+M G L + + +
Sbjct: 188 KFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD 247
Query: 236 QA------ASLDWGKR-CK--------------IVASNILLNDDF--EAKISDFGLARLI 272
+ ++++ ++ CK + NI+ E K+ DFGL +
Sbjct: 248 EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307
Query: 273 SDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDKDG 332
+S V GT + PE D++S GV+ L++G P G E +D+
Sbjct: 308 DPKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 365
Query: 333 ENL--VDW 338
N+ DW
Sbjct: 366 RNVKSCDW 373
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELK 170
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 171 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P G +A K + R + E++ L +V G D E + E+M
Sbjct: 56 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 115
Query: 227 GSLDDWLRNQAASLD--WGK--------------RCKIV-----ASNILLNDDFEAKISD 265
GSLD L+ + GK + KI+ SNIL+N E K+ D
Sbjct: 116 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 175
Query: 266 FGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
FG++ + D ++ GT Y+ PE + + D++S G+ L+E+ G+ P P
Sbjct: 176 FGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
+N+ L+ K+ DFGLAR+++ S V GT Y+ PE E+ D++S G
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 311 VILLELVTGKQP 322
+L EL P
Sbjct: 204 CLLYELCALMPP 215
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELK 170
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 171 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 148 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 204
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 205 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 243
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 256 NDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLE 315
ND+ E KI DFG ARL + T T+ Y PE E D++S GVIL
Sbjct: 143 NDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYT 201
Query: 316 LVTGKQP 322
+++G+ P
Sbjct: 202 MLSGQVP 208
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 248 IVASNILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
I N++L+ D KI+DFGL + ISD + GT Y+ PE D
Sbjct: 134 IKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDW 191
Query: 307 YSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
+ GV++ E++ G+ P F ++D E L + +L +E+ P L+ +K
Sbjct: 192 WGLGVVMYEMMCGRLP----FYNQDHERLFELIL-------MEEIRFPRTLSPEAK---- 236
Query: 367 KMLQIATGCISNDPTVR 383
+ G + DP R
Sbjct: 237 ---SLLAGLLKKDPKQR 250
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 248 IVASNILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
I N++L+ D KI+DFGL + ISD + GT Y+ PE D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 307 YSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
+ GV++ E++ G+ P F ++D E L + +L +E+ P L+ +K
Sbjct: 189 WGLGVVMYEMMCGRLP----FYNQDHERLFELIL-------MEEIRFPRTLSPEAK---- 233
Query: 367 KMLQIATGCISNDPTVR 383
+ G + DP R
Sbjct: 234 ---SLLAGLLKKDPKQR 247
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 172 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 153 SNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 213 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 241
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 27/173 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
V +K L +A F + + H++LV G C +E +LV E++ GSLD +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY 102
Query: 233 LRNQ------------AASLDWGKRC---------KIVASNILLNDDFEAKISDFGLARL 271
L+ A L W + A NILL + + K + +L
Sbjct: 103 LKKNKNCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162
Query: 272 ISDCESHVST----VVAGTIGYVPPEYGGTGKATERG-DVYSFGVILLELVTG 319
SD ++ ++ I +VPPE K D +SFG L E+ +G
Sbjct: 163 -SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 34/182 (18%)
Query: 169 DGKT---VAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEE------ 216
DG+T VA+KKL Q+ R + E+ L ++H+N++ LL + DE
Sbjct: 46 DGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104
Query: 217 -------------KLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDD 258
KL+ +E + + + + L + I+ N+ +N+D
Sbjct: 105 FYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED 164
Query: 259 FEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVT 318
E KI DFGLAR +S + V P + T+ D++S G I+ E++T
Sbjct: 165 CELKILDFGLAR---QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
Query: 319 GK 320
GK
Sbjct: 222 GK 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 116
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 117 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELK 176
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 177 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 248 IVASNILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
I N++L+ D KI+DFGL + ISD + GT Y+ PE D
Sbjct: 136 IKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDW 193
Query: 307 YSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
+ GV++ E++ G+ P F ++D E L + +L +E+ P L+ +K
Sbjct: 194 WGLGVVMYEMMCGRLP----FYNQDHERLFELIL-------MEEIRFPRTLSPEAK---- 238
Query: 367 KMLQIATGCISNDPTVR 383
+ G + DP R
Sbjct: 239 ---SLLAGLLKKDPKQR 252
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+LL+ + K++DFG+ + C + GT Y+ PE D ++ GV
Sbjct: 154 NVLLDHEGHCKLADFGMCKE-GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGV 212
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI 371
+L E++ G P FE ++ ++L + +L+ DEV+ P L+ +
Sbjct: 213 LLYEMLCGHAP----FEAENEDDLFEAILN-------DEVVYPTWLHED----------- 250
Query: 372 ATGCISNDPTVRPTM 386
ATG + + T PTM
Sbjct: 251 ATGILKSFMTKNPTM 265
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 148 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRALF 204
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 205 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 170
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 171 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 248 IVASNILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
I N++L+ D KI+DFGL + ISD + GT Y+ PE D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 307 YSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
+ GV++ E++ G+ P F ++D E L + +L +E+ P L+ +K
Sbjct: 189 WGLGVVMYEMMCGRLP----FYNQDHERLFELIL-------MEEIRFPRTLSPEAK---- 233
Query: 367 KMLQIATGCISNDPTVR 383
+ G + DP R
Sbjct: 234 ---SLLAGLLKKDPKQR 247
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 75/180 (41%), Gaps = 37/180 (20%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLV 220
G VAVKKLS Q R + E+ L V H+N++ LL + ++ LV
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 107
Query: 221 YEYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFE 260
E M + LD + + L + C I SNI++ D
Sbjct: 108 MELMDANLCQVIHMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164
Query: 261 AKISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR + C + + T T Y PE G G A D++S G I+ ELV G
Sbjct: 165 LKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILGMGYAA-NVDIWSVGCIMGELVKG 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 172 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 153 SNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 213 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 241
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 173 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 170 GKTVAVKKLS-QATGQG-DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+T A+KK+ + +G E+ L +KH N+V+L + +LV+E++
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85
Query: 225 VKGSLD------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+K LD +L + + +++ N+L+N + E KI+DFG
Sbjct: 86 LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG 145
Query: 268 LARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
LAR + VV T+ Y P+ G+ K + D++S G I E+V G P P
Sbjct: 146 LARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-APLFP 202
Query: 326 EFEDKD 331
+ D
Sbjct: 203 GVSEAD 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 35 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 94
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 95 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 154
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 155 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 211
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 212 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 250
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 170 GKTVAVKKLS-QATGQG-DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+T A+KK+ + +G E+ L +KH N+V+L + +LV+E++
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85
Query: 225 VKGSLD------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+K LD +L + + +++ N+L+N + E KI+DFG
Sbjct: 86 LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG 145
Query: 268 LARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
LAR + VV T+ Y P+ G+ K + D++S G I E+V G P P
Sbjct: 146 LARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFP 202
Query: 326 EFEDKD 331
+ D
Sbjct: 203 GVSEAD 208
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 148 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 204
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 205 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 243
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 110
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 170
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 171 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 248 IVASNILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
I N++L+ D KI+DFGL + ISD + GT Y+ PE D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 307 YSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
+ GV++ E++ G+ P F ++D E L + +L +E+ P L+ +K
Sbjct: 189 WGLGVVMYEMMCGRLP----FYNQDHERLFELIL-------MEEIRFPRTLSPEAK---- 233
Query: 367 KMLQIATGCISNDPTVR 383
+ G + DP R
Sbjct: 234 ---SLLAGLLKKDPKQR 247
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 167
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 168 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 104
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 105 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 164
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 165 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 248 IVASNILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
I N++L+ D KI+DFGL + ISD + GT Y+ PE D
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 307 YSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTML 366
+ GV++ E++ G+ P F ++D E L + +L +E+ P L+ +K
Sbjct: 189 WGLGVVMYEMMCGRLP----FYNQDHERLFELIL-------MEEIRFPRTLSPEAK---- 233
Query: 367 KMLQIATGCISNDPTVR 383
+ G + DP R
Sbjct: 234 ---SLLAGLLKKDPKQR 247
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 147 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 203
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 204 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 35 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 94
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 95 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 154
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 155 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRALF 211
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 212 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 250
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 103 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 162
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 163 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 168 PDGKTVAVKKLSQATGQGDR-EFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
P G +A K + R + E++ L +V G D E + E+M
Sbjct: 32 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 91
Query: 227 GSLDDWLRNQAASLD--WGK--------------RCKIV-----ASNILLNDDFEAKISD 265
GSLD L+ + GK + KI+ SNIL+N E K+ D
Sbjct: 92 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 151
Query: 266 FGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
FG++ + D ++ GT Y+ PE + + D++S G+ L+E+ G+ P P
Sbjct: 152 FGVSGQLID---EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPP 208
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELK 167
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 168 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 153 SNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 213 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 241
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 31/178 (17%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 118 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 177
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D ++ VA P + D++S G I+ EL+TG+
Sbjct: 178 ILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 157 SNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 217 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 245
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 31/178 (17%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 118 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 177
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D ++ VA P + D++S G I+ EL+TG+
Sbjct: 178 ILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 111
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELK 171
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 172 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 31/178 (17%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 167
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D ++ VA P + D++S G I+ EL+TG+
Sbjct: 168 ILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 32 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 91
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 92 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 151
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 152 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 208
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 209 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 247
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 129 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 188
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 189 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 59 GLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 117
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 118 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 177
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 178 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 147 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 203
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 204 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 39/182 (21%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
Query: 263 ISDFGLARLISDCESHVSTVVAGTIG---YVPPEYG-GTGKATERGDVYSFGVILLELVT 318
I DFGLAR H + G + Y PE + D++S G I+ EL+T
Sbjct: 186 ILDFGLAR-------HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 319 GK 320
G+
Sbjct: 239 GR 240
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 107
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 167
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 168 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 43 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 162 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 45 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 103
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 104 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 163
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 164 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 88
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 148
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 149 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 205
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 206 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 244
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 157 SNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 217 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 245
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 148 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 204
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 205 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 102
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 103 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 162
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 163 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 186 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 157 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 217 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 245
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 90
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 91 LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 151 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 207
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 208 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 246
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD 90
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 91 LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 151 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 207
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 208 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 246
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 147 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 203
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 204 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 148 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 204
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 205 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 243
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 148 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 204
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 205 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 116
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 117 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 176
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 177 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 148 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 204
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 205 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 243
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD 90
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 91 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF 150
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 151 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 207
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 208 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 246
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 125 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 184
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 185 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 170 GKTVAVKKLS-QATGQG-DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+T A+KK+ + +G E+ L +KH N+V+L + +LV+E++
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85
Query: 225 VKGSLD------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFG 267
+K LD +L + + +++ N+L+N + E KI+DFG
Sbjct: 86 LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG 145
Query: 268 LARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
LAR + +V T+ Y P+ G+ K + D++S G I E+V G P P
Sbjct: 146 LARAFGIPVRKYTHEIV--TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFP 202
Query: 326 EFEDKD 331
+ D
Sbjct: 203 GVSEAD 208
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 90
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 91 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 151 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 207
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 208 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 246
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD 89
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 90 LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 149
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 150 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 206
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 207 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 245
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 89
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 90 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 149
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 150 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 206
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 207 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 245
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 90
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 91 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 151 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 207
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 208 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 246
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 147
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 148 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 204
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 205 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 243
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 153 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 213 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 241
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 88
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 148
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 149 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 205
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 206 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 244
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 155 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 214
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 215 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 243
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 157 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 217 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 245
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 147 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 203
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 204 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 158 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 217
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 218 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 159 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 218
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 219 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 150 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 209
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 210 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 157 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 217 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 245
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 173 SNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 232
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 233 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 261
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD 88
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF 148
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 149 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 205
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 206 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 244
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 155 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 214
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 215 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 243
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 151 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 210
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 211 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 239
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 88
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 148
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 149 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 205
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 206 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 244
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 151 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 210
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 211 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 239
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 32 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 91
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 92 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 151
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 152 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 208
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 209 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 247
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 161 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 220
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 221 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 153 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 213 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 241
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 88
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF 148
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 149 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 205
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 206 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 244
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 89
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 90 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 149
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 150 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 206
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 207 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 245
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 88 LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF 147
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 148 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 204
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 205 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 31/177 (17%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSV-----DEEKLLVYE 222
+ VAVKKLS Q+ R + E+ L +KH+N++ LL + D ++ +
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVT 112
Query: 223 YMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAKI 263
++ L++ +++QA S L + I+ SN+ +N+D E +I
Sbjct: 113 TLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
DFGLAR + ++ VA P + D++S G I+ EL+ GK
Sbjct: 173 LDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 89
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 90 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF 149
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 150 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 206
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 207 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 245
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 252 NILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
N++L+ D KI+DFGL + I D + GT Y+ PE D + G
Sbjct: 282 NLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 339
Query: 311 VILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQ 370
V++ E++ G+ P F ++D E L + +L +E+ P L +K
Sbjct: 340 VVMYEMMCGRLP----FYNQDHEKLFELIL-------MEEIRFPRTLGPEAK-------S 381
Query: 371 IATGCISNDPTVR 383
+ +G + DP R
Sbjct: 382 LLSGLLKKDPKQR 394
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 252 NILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
N++L+ D KI+DFGL + I D + GT Y+ PE D + G
Sbjct: 279 NLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 336
Query: 311 VILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQ 370
V++ E++ G+ P F ++D E L + +L +E+ P L +K
Sbjct: 337 VVMYEMMCGRLP----FYNQDHEKLFELIL-------MEEIRFPRTLGPEAK-------S 378
Query: 371 IATGCISNDPTVR 383
+ +G + DP R
Sbjct: 379 LLSGLLKKDPKQR 391
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ +++Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGL R D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFGLCRHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 105/261 (40%), Gaps = 74/261 (28%)
Query: 173 VAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGY----CSVDEEKLLVYEYMV 225
VAVK + + Q +RE T GM KH+NL++ + +++ E L+ +
Sbjct: 41 VAVKIFPLQDKQSWQSEREI---FSTPGM-KHENLLQFIAAEKRGSNLEVELWLITAFHD 96
Query: 226 KGSLDDWLRNQAASLDWGKRCKIV--------------------------------ASNI 253
KGSL D+L+ + W + C + + N+
Sbjct: 97 KGSLTDYLKGNI--ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNV 154
Query: 254 LLNDDFEAKISDFGLARLISDCESHVSTV-VAGTIGYVPPEY--GGTG---KATERGDVY 307
LL D A ++DFGLA + T GT Y+ PE G A R D+Y
Sbjct: 155 LLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMY 214
Query: 308 SFGVILLELVTG-KQPTGP------EFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNAN 360
+ G++L ELV+ K GP FE++ G++ + E L V++
Sbjct: 215 AMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQH------------PSLEELQEVVVHKK 262
Query: 361 SKPTM----LKMLQIATGCIS 377
+PT+ LK +A C++
Sbjct: 263 MRPTIKDHWLKHPGLAQLCVT 283
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 173 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 232
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 233 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 261
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 155 SNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 214
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 215 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 243
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 46/220 (20%)
Query: 168 PDGKTVAVKKLSQATGQGDREFAA-----EMETLGMVKHQNLVELLGYCSVDE----EKL 218
P G+ VA+KK+ D+ A E++ L KH+N++ + D ++
Sbjct: 34 PTGEIVAIKKIEPF----DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89
Query: 219 LVYEYMVKGSLDDWLRNQAASLDWG--------KRCKIV-----------ASNILLNDDF 259
+ + +++ L + Q S D + K++ SN+L+N +
Sbjct: 90 YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC 149
Query: 260 EAKISDFGLARLISDCESHVS---------TVVAGTIGYVPPEYGGTGKATERG-DVYSF 309
+ K+ DFGLAR+I + + S T T Y PE T R DV+S
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 310 GVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQAD 349
G IL EL + P F +D + + + ++ +D
Sbjct: 210 GCILAELFLRR----PIFPGRDYRHQLLLIFGIIGTPHSD 245
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 46/220 (20%)
Query: 168 PDGKTVAVKKLSQATGQGDREFAA-----EMETLGMVKHQNLVELLGYCSVDE----EKL 218
P G+ VA+KK+ D+ A E++ L KH+N++ + D ++
Sbjct: 34 PTGEIVAIKKIEPF----DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89
Query: 219 LVYEYMVKGSLDDWLRNQAASLDWG--------KRCKIV-----------ASNILLNDDF 259
+ + +++ L + Q S D + K++ SN+L+N +
Sbjct: 90 YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC 149
Query: 260 EAKISDFGLARLISDCESHVS---------TVVAGTIGYVPPEYGGTGKATERG-DVYSF 309
+ K+ DFGLAR+I + + S T T Y PE T R DV+S
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 310 GVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQAD 349
G IL EL + P F +D + + + ++ +D
Sbjct: 210 GCILAELFLRR----PIFPGRDYRHQLLLIFGIIGTPHSD 245
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILL 314
L++D + ISDFGL+++ D S +ST GT GYV PE ++ D +S GVI
Sbjct: 152 LDEDSKIMISDFGLSKM-EDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 315 ELVTGKQPTGPEFEDKDGENLVDWVL 340
L+ G P F D++ L + +L
Sbjct: 210 ILLCGYPP----FYDENDAKLFEQIL 231
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 45/185 (24%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGY----CSVDE-EKLLVY 221
G +AVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 76 GLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLV 134
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 135 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 194
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPE-------YGGTGKATERGDVYSFGVILLE 315
I DFGLAR D T T Y PE Y T D++S G I+ E
Sbjct: 195 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNMT------VDIWSVGCIMAE 244
Query: 316 LVTGK 320
L+TG+
Sbjct: 245 LLTGR 249
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILL 314
L++D + ISDFGL+++ D S +ST GT GYV PE ++ D +S GVI
Sbjct: 152 LDEDSKIMISDFGLSKM-EDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 315 ELVTGKQPTGPEFEDKDGENLVDWVL 340
L+ G P F D++ L + +L
Sbjct: 210 ILLCGYPP----FYDENDAKLFEQIL 231
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 31/178 (17%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 129 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 188
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D + VA P + D++S G I+ EL+TG+
Sbjct: 189 ILDFGLARHTDD---EMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 192 EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM----------VKGSLD-----DWLRNQ 236
E+ L +KH+N+V L D++ LV+E+ G LD +L
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 237 AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYV 290
L + ++ N+L+N + E K++DFGLAR + + VV T+ Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYR 168
Query: 291 PPE--YGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
PP+ +G +T D++S G I EL +P P
Sbjct: 169 PPDVLFGAKLYSTS-IDMWSAGCIFAELANAARPLFP 204
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 36/191 (18%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL--LVYEYMVKG 227
K + KKLS Q + E ++H N+V L + S+ EE LV++ + G
Sbjct: 59 AKIINTKKLSARDFQ---KLEREARICRKLQHPNIVRL--HDSIQEESFHYLVFDLVTGG 113
Query: 228 SL-DDWLRNQAASLDWGKRC--KIVAS-----------------NILLNDDFEA---KIS 264
L +D + + S C +I+ S N+LL + K++
Sbjct: 114 ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 173
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTG 324
DFGLA ++D E+ AGT GY+ PE ++ D+++ GVIL L+ G
Sbjct: 174 DFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY---- 227
Query: 325 PEFEDKDGENL 335
P F D+D L
Sbjct: 228 PPFWDEDQHRL 238
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILL 314
L++D + ISDFGL+++ D S +ST GT GYV PE ++ D +S GVI
Sbjct: 152 LDEDSKIMISDFGLSKM-EDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 315 ELVTGKQPTGPEFEDKDGENLVDWVL 340
L+ G P F D++ L + +L
Sbjct: 210 ILLCGY----PPFYDENDAKLFEQIL 231
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 255 LNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILL 314
L++D + ISDFGL+++ D S +ST GT GYV PE ++ D +S GVI
Sbjct: 152 LDEDSKIMISDFGLSKM-EDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
Query: 315 ELVTGKQPTGPEFEDKDGENLVDWVL 340
L+ G P F D++ L + +L
Sbjct: 210 ILLCGYPP----FYDENDAKLFEQIL 231
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEY-----GGTGKATE 302
I N+LL+ + +++DFG ++D + S+V GT Y+ PE G GK
Sbjct: 201 IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 260
Query: 303 RGDVYSFGVILLELVTGKQPTGPE 326
D +S GV + E++ G+ P E
Sbjct: 261 ECDWWSLGVCMYEMLYGETPFYAE 284
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I D+GLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDYGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 252 NILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
N++L+ D KI+DFGL + I D + GT Y+ PE D + G
Sbjct: 140 NLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 311 VILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQ 370
V++ E++ G+ P F ++D E L + +L +E+ P L +K
Sbjct: 198 VVMYEMMCGRLP----FYNQDHEKLFELIL-------MEEIRFPRTLGPEAK-------S 239
Query: 371 IATGCISNDPTVR 383
+ +G + DP R
Sbjct: 240 LLSGLLKKDPKQR 252
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEY-----GGTGKATE 302
I N+LL+ + +++DFG ++D + S+V GT Y+ PE G GK
Sbjct: 217 IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 276
Query: 303 RGDVYSFGVILLELVTGKQPTGPE 326
D +S GV + E++ G+ P E
Sbjct: 277 ECDWWSLGVCMYEMLYGETPFYAE 300
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQD 86
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 87 LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 146
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 147 GLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 203
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 204 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVST-VVAGTIGYVPPE---YGGTGKATERGDVY 307
N++L+ + KI+DFG+ + + V+T GT Y+ PE Y GK+ D +
Sbjct: 472 NVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV---DWW 526
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVL 340
+FGV+L E++ G+ P FE +D + L ++
Sbjct: 527 AFGVLLYEMLAGQAP----FEGEDEDELFQSIM 555
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQ 321
K++DFGLA ++D E+ AGT GY+ PE ++ D+++ GVIL L+ G
Sbjct: 148 KLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY- 204
Query: 322 PTGPEFEDKDGENL 335
P F D+D L
Sbjct: 205 ---PPFWDEDQHRL 215
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTV--VAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H + T Y PE K T+ D++
Sbjct: 157 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIW 216
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 217 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTV--VAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+LLN + KI DFGLAR+ H + T Y PE K T+ D++
Sbjct: 158 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIW 217
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 218 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 246
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQ 321
K++DFGLA ++D E+ AGT GY+ PE ++ D+++ GVIL L+ G
Sbjct: 148 KLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 322 PTGPEFEDKDGENL 335
P F D+D L
Sbjct: 206 P----FWDEDQHRL 215
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 252 NILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
N++L+ D KI+DFGL + I D + GT Y+ PE D + G
Sbjct: 141 NLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 198
Query: 311 VILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQ 370
V++ E++ G+ P F ++D E L + +L +E+ P L +K
Sbjct: 199 VVMYEMMCGRLP----FYNQDHEKLFELIL-------MEEIRFPRTLGPEAK-------S 240
Query: 371 IATGCISNDPTVR 383
+ +G + DP R
Sbjct: 241 LLSGLLKKDPKQR 253
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQ 321
K++DFGLA ++D E+ AGT GY+ PE ++ D+++ GVIL L+ G
Sbjct: 147 KLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY- 203
Query: 322 PTGPEFEDKDGENL 335
P F D+D L
Sbjct: 204 ---PPFWDEDQHRL 214
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 252 NILLNDDFEAKISDFGLARL-ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
N++L+ D KI+DFGL + I D + GT Y+ PE D + G
Sbjct: 139 NLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 196
Query: 311 VILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQ 370
V++ E++ G+ P F ++D E L + +L +E+ P L +K
Sbjct: 197 VVMYEMMCGRLP----FYNQDHEKLFELIL-------MEEIRFPRTLGPEAK-------S 238
Query: 371 IATGCISNDPTVR 383
+ +G + DP R
Sbjct: 239 LLSGLLKKDPKQR 251
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM--- 224
G+ VA+KK+ T A E+ L + H N+V+LL + + LV+E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQD 90
Query: 225 VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDF 266
+K +D +L L + +++ N+L+N + K++DF
Sbjct: 91 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 150
Query: 267 GLARLIS-DCESHVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTG 324
GLAR ++ VV T+ Y PE G + D++S G I E+VT ++
Sbjct: 151 GLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALF 207
Query: 325 PEFEDKDGENLVDWVLHMMKN-EQADEVLDPAVLN-ANSKPTMLK 367
P G++ +D + + + DEV+ P V + + KP+ K
Sbjct: 208 P------GDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 246
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVS--TVVAGTIGYVPPEYGGTGKA-TERGDVY 307
SN+L+N + KI DFGLAR+ H T T Y PE K T+ D++
Sbjct: 173 SNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIW 232
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMM 343
S G IL E+++ + P P G++ +D + H++
Sbjct: 233 SVGCILAEMLSNR-PIFP------GKHYLDQLNHIL 261
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ + L + I+ SN+ +N+D E K
Sbjct: 102 THLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 162 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSV-----DEEKLLVYE 222
+ VAVKKLS Q+ R + E+ L +KH+N++ LL + D ++ +
Sbjct: 46 QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVT 104
Query: 223 YMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAKI 263
++ L++ ++ QA S L + I+ SN+ +N+D E +I
Sbjct: 105 TLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI 164
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
DFGLAR + ++ VA P + D++S G I+ EL+ GK
Sbjct: 165 LDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 17/87 (19%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVA-----GTIGYVPPE---YGGTGKATER 303
N++L+ + KI+DFG+ C+ H+ V GT Y+ PE Y GK+
Sbjct: 150 NVMLDSEGHIKIADFGM------CKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSV-- 201
Query: 304 GDVYSFGVILLELVTGKQPTGPEFEDK 330
D +++GV+L E++ G+ P E ED+
Sbjct: 202 -DWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEY-----GGTGKATE 302
I NIL++ + +++DFG + + + S+V GT Y+ PE GG G+
Sbjct: 201 IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGP 260
Query: 303 RGDVYSFGVILLELVTGKQPTGPE 326
D +S GV + E++ G+ P E
Sbjct: 261 ECDWWSLGVCMYEMLYGETPFYAE 284
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 26/173 (15%)
Query: 173 VAVKKL--SQATGQG-DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
VA+K L SQ +G + + E+E + H N++ L Y L+ EY +G L
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
Query: 230 DDWLRNQ---------------AASLDWGKRCKIVASNI-----LLNDDFEAKISDFGLA 269
L+ A +L + K++ +I LL E KI+DFG +
Sbjct: 111 YKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS 170
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
S + GT+ Y+PPE E+ D++ GV+ EL+ G P
Sbjct: 171 ---VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 94/244 (38%), Gaps = 49/244 (20%)
Query: 169 DGKTVAVKKLSQATGQGD---REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMV 225
+ + VA+KK+S + Q + ++ E+ L ++H N ++ G + LV EY +
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98
Query: 226 KGSLDDWLRNQAASLDWGKRCKIV---------------------ASNILLNDDFEAKIS 264
GS D L L + + A NILL++ K+
Sbjct: 99 -GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG 157
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQ 321
DFG A +++ V GT ++ PE G+ + DV+S G+ +EL K
Sbjct: 158 DFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 212
Query: 322 PTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPT 381
P N + + H+ +NE PA+ + + + C+ P
Sbjct: 213 PLF-------NMNAMSALYHIAQNE------SPALQSGHWSEYFRNFVD---SCLQKIPQ 256
Query: 382 VRPT 385
RPT
Sbjct: 257 DRPT 260
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 216 EKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIVASNILLNDDFEAKISDFGLARLISDC 275
E L+ Y + V ++ + D + A NILL++ KI DFGLAR I
Sbjct: 198 EHLICYSFQVAKGMEFLASRKCIHRD------LAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 276 ESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+V A + ++ PE T + DV+SFGV+L E+ + G P
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 228 SLDDWLRNQ 236
+L +LR++
Sbjct: 118 NLSTYLRSK 126
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVST-VVAGTIGYVPPE---YGGTGKATERGDVY 307
N++L+ + KI+DFG+ + + V+T GT Y+ PE Y GK+ D +
Sbjct: 151 NVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV---DWW 205
Query: 308 SFGVILLELVTGKQPTGPEFEDKDGENLVDWVL 340
+FGV+L E++ G+ P FE +D + L ++
Sbjct: 206 AFGVLLYEMLAGQAP----FEGEDEDELFQSIM 234
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 216 EKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIVASNILLNDDFEAKISDFGLARLISDC 275
E L+ Y + V ++ + D + A NILL++ KI DFGLAR I
Sbjct: 193 EHLICYSFQVAKGMEFLASRKCIHRD------LAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 276 ESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+V A + ++ PE T + DV+SFGV+L E+ + G P
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 53 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 228 SLDDWLRNQ 236
+L +LR++
Sbjct: 113 NLSTYLRSK 121
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I DF LAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDFYLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 34/201 (16%)
Query: 192 EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM---VKGSLD-------------DWLRN 235
E+ L + H N+V+LL + + LV+E++ +K +D +L
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 236 QAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGY 289
L + +++ N+L+N + K++DFGLAR ++ VV T+ Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWY 169
Query: 290 VPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKN-EQ 347
PE G + D++S G I E+VT ++ P G++ +D + + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP------GDSEIDQLFRIFRTLGT 222
Query: 348 ADEVLDPAVLN-ANSKPTMLK 367
DEV+ P V + + KP+ K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPK 243
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 34/201 (16%)
Query: 192 EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM---VKGSLD-------------DWLRN 235
E+ L + H N+V+LL + + LV+E++ +K +D +L
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 236 QAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGY 289
L + +++ N+L+N + K++DFGLAR ++ VV T+ Y
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWY 168
Query: 290 VPPE-YGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKN-EQ 347
PE G + D++S G I E+VT ++ P G++ +D + + +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFP------GDSEIDQLFRIFRTLGT 221
Query: 348 ADEVLDPAVLN-ANSKPTMLK 367
DEV+ P V + + KP+ K
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPK 242
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 216 EKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIVASNILLNDDFEAKISDFGLARLISDC 275
E L+ Y + V ++ + D + A NILL++ KI DFGLAR I
Sbjct: 200 EHLICYSFQVAKGMEFLASRKCIHRD------LAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 276 ESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+V A + ++ PE T + DV+SFGV+L E+ + G P
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 228 SLDDWLRNQ 236
+L +LR++
Sbjct: 120 NLSTYLRSK 128
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 216 EKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIVASNILLNDDFEAKISDFGLARLISDC 275
E L+ Y + V ++ + D + A NILL++ KI DFGLAR I
Sbjct: 191 EHLICYSFQVAKGMEFLASRKCIHRD------LAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 276 ESHVSTVVAG-TIGYVPPEYGGTGKATERGDVYSFGVILLELVT-GKQP 322
+V A + ++ PE T + DV+SFGV+L E+ + G P
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 171 KTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYMVKG 227
+TVAVK L + AT R +E++ L + H N+V LLG C+ L+V E+ G
Sbjct: 51 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 228 SLDDWLRNQ 236
+L +LR++
Sbjct: 111 NLSTYLRSK 119
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
V +K L +A F + + H++LV G C +E +LV E++ GSLD +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102
Query: 233 LRNQ----------------AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARL 271
L+ AA++ + + ++ A NILL + + K + +L
Sbjct: 103 LKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162
Query: 272 ISDCESHVST----VVAGTIGYVPPEYGGTGKATERG-DVYSFGVILLELVTG 319
SD ++ ++ I +VPPE K D +SFG L E+ +G
Sbjct: 163 -SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSV-----DEEKLLVYE 222
+ VAVKKLS Q+ R + E+ L +KH+N++ LL + D ++ +
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVT 112
Query: 223 YMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAKI 263
++ L++ ++ QA S L + I+ SN+ +N+D E +I
Sbjct: 113 TLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
DFGLAR + ++ VA P + D++S G I+ EL+ GK
Sbjct: 173 LDFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 88/220 (40%), Gaps = 46/220 (20%)
Query: 168 PDGKTVAVKKLSQATGQGDREFAA-----EMETLGMVKHQNLVELLGYCSVDE----EKL 218
P G+ VA+KK+ D+ A E++ L KH+N++ + D ++
Sbjct: 34 PTGEIVAIKKIEPF----DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89
Query: 219 LVYEYMVKGSLDDWLRNQAASLDWG--------KRCKIV-----------ASNILLNDDF 259
+ + +++ L + Q S D + K++ SN+L+N +
Sbjct: 90 YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC 149
Query: 260 EAKISDFGLARLISDCESHVSTVVAGTIG---------YVPPEYGGTGKATERG-DVYSF 309
+ K+ DFGLAR+I + + S G Y PE T R DV+S
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 310 GVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQAD 349
G IL EL + P F +D + + + ++ +D
Sbjct: 210 GCILAELFLRR----PIFPGRDYRHQLLLIFGIIGTPHSD 245
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 94/244 (38%), Gaps = 49/244 (20%)
Query: 169 DGKTVAVKKLSQATGQGD---REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMV 225
+ + VA+KK+S + Q + ++ E+ L ++H N ++ G + LV EY +
Sbjct: 78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137
Query: 226 KGSLDDWLRNQAASLDWGKRCKIV---------------------ASNILLNDDFEAKIS 264
GS D L L + + A NILL++ K+
Sbjct: 138 -GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG 196
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEY---GGTGKATERGDVYSFGVILLELVTGKQ 321
DFG A +++ V GT ++ PE G+ + DV+S G+ +EL K
Sbjct: 197 DFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251
Query: 322 PTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDPT 381
P N + + H+ +NE PA+ + + + C+ P
Sbjct: 252 PLF-------NMNAMSALYHIAQNE------SPALQSGHWSEYFRNFVD---SCLQKIPQ 295
Query: 382 VRPT 385
RPT
Sbjct: 296 DRPT 299
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 65/178 (36%), Gaps = 26/178 (14%)
Query: 171 KTVAVKKLS--QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKG 227
K A+K LS + + D F E + + V L Y D+ L +V EYM G
Sbjct: 95 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 154
Query: 228 SLDDWLRNQAASLDWGK-------------------RCKIVASNILLNDDFEAKISDFGL 268
L + + N W + + N+LL+ K++DFG
Sbjct: 155 DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT 214
Query: 269 ARLISDCESHVSTVVAGTIGYVPPEY----GGTGKATERGDVYSFGVILLELVTGKQP 322
++ GT Y+ PE GG G D +S GV L E++ G P
Sbjct: 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 65/178 (36%), Gaps = 26/178 (14%)
Query: 171 KTVAVKKLS--QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKG 227
K A+K LS + + D F E + + V L Y D+ L +V EYM G
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 159
Query: 228 SLDDWLRNQAASLDWGK-------------------RCKIVASNILLNDDFEAKISDFGL 268
L + + N W + + N+LL+ K++DFG
Sbjct: 160 DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT 219
Query: 269 ARLISDCESHVSTVVAGTIGYVPPEY----GGTGKATERGDVYSFGVILLELVTGKQP 322
++ GT Y+ PE GG G D +S GV L E++ G P
Sbjct: 220 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 167 MPDGKTVAVKKLSQATGQGDREFAAEMETLGMVK-HQNLVELLGYCSVDEEKLLVYEYMV 225
+ +GK AVK + + G E+ETL + ++N++EL+ + D LV+E +
Sbjct: 35 LQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQ 94
Query: 226 KGSL---------------DDWLRNQAASLDWGKRCKIV-----ASNILLNDDFE---AK 262
GS+ +R+ AA+LD+ I NIL + K
Sbjct: 95 GGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVK 154
Query: 263 ISDFGLA---RLISDCESHVS---TVVAGTIGYVPPEYGG--TGKAT---ERGDVYSFGV 311
I DF L +L + C + T G+ Y+ PE T +AT +R D++S GV
Sbjct: 155 ICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGV 214
Query: 312 ILLELVTGKQP 322
+L +++G P
Sbjct: 215 VLYIMLSGYPP 225
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 65/178 (36%), Gaps = 26/178 (14%)
Query: 171 KTVAVKKLS--QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKG 227
K A+K LS + + D F E + + V L Y D+ L +V EYM G
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 159
Query: 228 SLDDWLRNQAASLDWGK-------------------RCKIVASNILLNDDFEAKISDFGL 268
L + + N W + + N+LL+ K++DFG
Sbjct: 160 DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT 219
Query: 269 ARLISDCESHVSTVVAGTIGYVPPEY----GGTGKATERGDVYSFGVILLELVTGKQP 322
++ GT Y+ PE GG G D +S GV L E++ G P
Sbjct: 220 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 252 NILLNDDFEAKISDFGLARLISDC-------------ESHVSTVVAGTIGYVPPE-YGGT 297
NI +++ KI DFGLA+ + S T GT YV E GT
Sbjct: 146 NIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT 205
Query: 298 GKATERGDVYSFGVILLELV 317
G E+ D+YS G+I E++
Sbjct: 206 GHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 197 GMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLD 241
M+ H+N+V+ G+ + L EY G L D + A +
Sbjct: 60 AMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 242 WGKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYG 295
+ I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 296 GTGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 252 NILLND---DFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYS 308
NIL D KI DFGLA L E ST AGT Y+ PE T + D++S
Sbjct: 154 NILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVFKRD-VTFKCDIWS 210
Query: 309 FGVILLELVTGKQP-TGPEFED 329
GV++ L+TG P TG E+
Sbjct: 211 AGVVMYFLLTGCLPFTGTSLEE 232
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 252 NILLNDDFEAKISDFGLARLISDC-------------ESHVSTVVAGTIGYVPPE-YGGT 297
NI +++ KI DFGLA+ + S T GT YV E GT
Sbjct: 146 NIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT 205
Query: 298 GKATERGDVYSFGVILLELV 317
G E+ D+YS G+I E++
Sbjct: 206 GHYNEKIDMYSLGIIFFEMI 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+LL+DD +ISD GLA + ++ AGT G++ PE + D ++ GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQ 370
L E++ + P E + + L VL EQA V P + SK +LQ
Sbjct: 378 TLYEMIAARGPFRARGEKVENKELKQRVL-----EQA--VTYPDKFSPASKDFCEALLQ 429
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 59 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 72/179 (40%), Gaps = 35/179 (19%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLV 220
G VAVKKLS Q R + E+ L V H+N++ LL + ++ LV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 105
Query: 221 YEYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFE 260
E M + LD + + L + C I SNI++ D
Sbjct: 106 MELMDANLCQVIHMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 162
Query: 261 AKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR S + + T T Y PE E D++S G I+ ELV G
Sbjct: 163 LKILDFGLARTAST--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+LL+DD +ISD GLA + ++ AGT G++ PE + D ++ GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQ 370
L E++ + P E + + L VL EQA V P + SK +LQ
Sbjct: 378 TLYEMIAARGPFRARGEKVENKELKQRVL-----EQA--VTYPDKFSPASKDFCEALLQ 429
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 248 IVASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGK-ATERGD 305
I N+LL++ KISDFGLA + + + + GT+ YV PE + E D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 306 VYSFGVILLELVTGKQP 322
V+S G++L ++ G+ P
Sbjct: 190 VWSCGIVLTAMLAGELP 206
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKL--------L 219
G+ VA+KK+ + A E++ L ++KH+N+V L+ C L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 220 VYEY------------MVKGSLDDWLRNQAASLD---WGKRCKIV-----ASNILLNDDF 259
V+++ +VK +L + R L+ + R KI+ A+N+L+ D
Sbjct: 103 VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 162
Query: 260 EAKISDFGLARLISDCES-----HVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVIL 313
K++DFGLAR S ++ + + VV T+ Y PPE G D++ G I+
Sbjct: 163 VLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 314 LELVT 318
E+ T
Sbjct: 221 AEMWT 225
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 248 IVASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGK-ATERGD 305
I N+LL++ KISDFGLA + + + + GT+ YV PE + E D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 306 VYSFGVILLELVTGKQP 322
V+S G++L ++ G+ P
Sbjct: 190 VWSCGIVLTAMLAGELP 206
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 171 KTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM------ 224
K V V K + + G + E M+KH ++VELL S D +V+E+M
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC 114
Query: 225 ---VKGSLDDWLRNQAAS-------LDWGKRCK--------IVASNILL---NDDFEAKI 263
VK + ++ ++A + L+ + C + N+LL + K+
Sbjct: 115 FEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKL 174
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
DFG+A + + V+ GT ++ PE + DV+ GVIL L++G P
Sbjct: 175 GDFGVAIQLGE-SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+LL+DD +ISD GLA + ++ AGT G++ PE + D ++ GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQ 370
L E++ + P E + + L VL EQA V P + SK +LQ
Sbjct: 378 TLYEMIAARGPFRARGEKVENKELKQRVL-----EQA--VTYPDKFSPASKDFCEALLQ 429
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKL--------L 219
G+ VA+KK+ + A E++ L ++KH+N+V L+ C L
Sbjct: 42 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101
Query: 220 VYEY------------MVKGSLDDWLRNQAASLD---WGKRCKIV-----ASNILLNDDF 259
V+++ +VK +L + R L+ + R KI+ A+N+L+ D
Sbjct: 102 VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 161
Query: 260 EAKISDFGLARLISDCES-----HVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVIL 313
K++DFGLAR S ++ + + VV T+ Y PPE G D++ G I+
Sbjct: 162 VLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIM 219
Query: 314 LELVT 318
E+ T
Sbjct: 220 AEMWT 224
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 248 IVASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGGTGK-ATERGD 305
I N+LL++ KISDFGLA + + + + GT+ YV PE + E D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 306 VYSFGVILLELVTGKQP 322
V+S G++L ++ G+ P
Sbjct: 190 VWSCGIVLTAMLAGELP 206
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 31/189 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
K + KKLS + ++ E ++KH N+V L S + LV++ + G L
Sbjct: 61 AKIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
Query: 230 -DDWLRNQAASLDWGKRC--KIVAS-----------------NILLNDDFEA---KISDF 266
+D + + S C +I+ S N+LL + K++DF
Sbjct: 118 FEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADF 177
Query: 267 GLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
GLA + E AGT GY+ PE + D+++ GVIL L+ G P
Sbjct: 178 GLAIEVQG-EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGY----PP 232
Query: 327 FEDKDGENL 335
F D+D L
Sbjct: 233 FWDEDQHKL 241
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 198 MVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD---------------WLRNQAASLDW 242
M+ H+N+V+ G+ + L EY G L D + A + +
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 243 GKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYVPPEYGG 296
I N+LL++ KISDFGLA + + + + GT+ YV PE
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 297 TGK-ATERGDVYSFGVILLELVTGKQP 322
+ E DV+S G++L ++ G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+LL+DD +ISD GLA + ++ AGT G++ PE + D ++ GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 312 ILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQ 370
L E++ + P E + + L VL EQA V P + SK +LQ
Sbjct: 378 TLYEMIAARGPFRARGEKVENKELKQRVL-----EQA--VTYPDKFSPASKDFCEALLQ 429
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 31/189 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
K + KKLS + ++ E ++KH N+V L S + L+++ + G L
Sbjct: 52 AKIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 108
Query: 230 -DDWLRNQAASLDWGKRC-------------------KIVASNILLNDDFEA---KISDF 266
+D + + S C + N+LL + K++DF
Sbjct: 109 FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADF 168
Query: 267 GLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
GLA + + E AGT GY+ PE + D+++ GVIL L+ G P
Sbjct: 169 GLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGY----PP 223
Query: 327 FEDKDGENL 335
F D+D L
Sbjct: 224 FWDEDQHRL 232
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 29/183 (15%)
Query: 177 KLSQATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRN 235
K+ + G D+E E+ + + H NL++L + +LV EY+ G L D + +
Sbjct: 120 KIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIID 179
Query: 236 QAASLD---------------------WGKRCKIVASNILL--NDDFEAKISDFGLARLI 272
++ +L + + NIL D + KI DFGLAR
Sbjct: 180 ESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239
Query: 273 SDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDKDG 332
E V GT ++ PE + D++S GVI L++G P D D
Sbjct: 240 KPREK--LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG---LSPFLGDNDA 294
Query: 333 ENL 335
E L
Sbjct: 295 ETL 297
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKL--------L 219
G+ VA+KK+ + A E++ L ++KH+N+V L+ C L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYL 102
Query: 220 VYEY------------MVKGSLDDWLRNQAASLD---WGKRCKIV-----ASNILLNDDF 259
V+++ +VK +L + R L+ + R KI+ A+N+L+ D
Sbjct: 103 VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 162
Query: 260 EAKISDFGLARLISDCES-----HVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVIL 313
K++DFGLAR S ++ + + VV T+ Y PPE G D++ G I+
Sbjct: 163 VLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 314 LELVT 318
E+ T
Sbjct: 221 AEMWT 225
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I FGLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILGFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 79/199 (39%), Gaps = 56/199 (28%)
Query: 169 DGKTVAVKKLSQATGQGDREFAAE--METLGMVKHQNLVELL---GYCSVD--EEKLLVY 221
D + VAVK S A Q F E + + +++H N+ + + D E LLV
Sbjct: 35 DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91
Query: 222 EYMVKGSLDDWLRNQAASLDWGKRCKIVAS------------------------------ 251
EY GSL +L + DW C++ S
Sbjct: 92 EYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSR 149
Query: 252 NILLNDDFEAKISDFGLA------RLISDCESHVSTVV-AGTIGYVPPEY--GGTG---- 298
N+L+ +D ISDFGL+ RL+ E + + GTI Y+ PE G
Sbjct: 150 NVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDX 209
Query: 299 -KATERGDVYSFGVILLEL 316
A ++ D+Y+ G+I E+
Sbjct: 210 ESALKQVDMYALGLIYWEI 228
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 170 GKTVAVKKLSQATGQGDREFAA--EMETLGMVKHQNLVELLGYCSVDEEKL--------L 219
G+ VA+KK+ + A E++ L ++KH+N+V L+ C L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 220 VYEY------------MVKGSLDDWLRNQAASLD---WGKRCKIV-----ASNILLNDDF 259
V+++ +VK +L + R L+ + R KI+ A+N+L+ D
Sbjct: 103 VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 162
Query: 260 EAKISDFGLARLISDCES-----HVSTVVAGTIGYVPPE-YGGTGKATERGDVYSFGVIL 313
K++DFGLAR S ++ + + VV T+ Y PPE G D++ G I+
Sbjct: 163 VLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 314 LELVT 318
E+ T
Sbjct: 221 AEMWT 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFG 310
SNI L D + KI DFGL + + T GT+ Y+ PE + + D+Y+ G
Sbjct: 165 SNIFLVDTKQVKIGDFGLVTSLKN--DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALG 222
Query: 311 VILLELV 317
+IL EL+
Sbjct: 223 LILAELL 229
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 192 EMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM----------VKGSLD-----DWLRNQ 236
E+ L +KH+N+V L D++ LV+E+ G LD +L
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 237 AASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLIS-DCESHVSTVVAGTIGYV 290
L + ++ N+L+N + E K+++FGLAR + + VV T+ Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYR 168
Query: 291 PPE--YGGTGKATERGDVYSFGVILLELVTGKQPTGP 325
PP+ +G +T D++S G I EL +P P
Sbjct: 169 PPDVLFGAKLYSTSI-DMWSAGCIFAELANAGRPLFP 204
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 18/141 (12%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTV-VAGTIGYVPPEYGGTGKATERGDV 306
+ A NILL+++ KI DFGLAR I +V + ++ PE + + DV
Sbjct: 225 LAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDV 284
Query: 307 YSFGVILLELVT-GKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTM 365
+S+GV+L E+ + G P D+D + + + M +A E P +
Sbjct: 285 WSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRM----RAPEYSTPEI--------- 331
Query: 366 LKMLQIATGCISNDPTVRPTM 386
QI C DP RP
Sbjct: 332 ---YQIMLDCWHRDPKERPRF 349
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 168 PDGKTVAVKKLSQ-ATGQGDREFAAEMETLGMVKHQ-NLVELLGYCSVDEEKLLV-YEYM 224
P +TVAVK L + AT + E++ L + H N+V LLG C+ L+V EY
Sbjct: 55 PTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYC 114
Query: 225 VKGSLDDWLRNQ 236
G+L ++L+++
Sbjct: 115 KYGNLSNYLKSK 126
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 30/147 (20%)
Query: 252 NILLNDDFEAKISDFGLARLISDC-------------ESHVSTVVAGTIGYVPPE-YGGT 297
NI +++ KI DFGLA+ + S T GT YV E GT
Sbjct: 146 NIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGT 205
Query: 298 GKATERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVL 357
G E+ D YS G+I E + TG E ++++K ++ + P
Sbjct: 206 GHYNEKIDXYSLGIIFFEXIY-PFSTGXE------------RVNILKKLRSVSIEFPPDF 252
Query: 358 NANSKPTMLKMLQIATGCISNDPTVRP 384
+ N K++++ I +DP RP
Sbjct: 253 DDNKXKVEKKIIRL---LIDHDPNKRP 276
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I D GLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDAGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I D GLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDRGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 31/186 (16%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL-DD 231
+ KKLS + ++ E ++KH N+V L S + L+++ + G L +D
Sbjct: 44 INTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFED 100
Query: 232 WLRNQAASLDWGKRC-------------------KIVASNILLNDDFEA---KISDFGLA 269
+ + S C + N+LL + K++DFGLA
Sbjct: 101 IVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFED 329
+ + E AGT GY+ PE + D+++ GVIL L+ G P F D
Sbjct: 161 -IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGY----PPFWD 215
Query: 330 KDGENL 335
+D L
Sbjct: 216 EDQHRL 221
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 36/226 (15%)
Query: 170 GKTVAVKKLS--QATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
G+ AVK +S Q + D+E E++ L + H N+++L + LV E
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 116
Query: 227 GSLDDWL--RNQAASLDWGKRCKIVAS------------------NILL---NDDFEAKI 263
G L D + R + + +D + + V S N+LL + D +I
Sbjct: 117 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 176
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPT 323
DFGL+ + + GT Y+ PE G E+ DV+S GVIL L++G P
Sbjct: 177 IDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF 233
Query: 324 GPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML 369
+G N D + + K + E+ ++ ++K + KML
Sbjct: 234 -------NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 272
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 42/237 (17%)
Query: 174 AVKKLSQATGQGD--REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
AVK +++A+ + E+E L + H N+++L +V E G L D
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 232 WL--RNQAASLDWGKRCKIVAS------------------NILLND---DFEAKISDFGL 268
+ R + + D + K V S NILL D + KI DFGL
Sbjct: 111 EIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
Query: 269 ARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFE 328
+ + GT Y+ PE G E+ DV+S GVIL L++G P
Sbjct: 171 STCFQQNTKMKDRI--GTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFY---- 223
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI-------ATGCISN 378
G+N D + + + A ++ ++ ++K + KML AT C+ +
Sbjct: 224 ---GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 28/174 (16%)
Query: 174 AVKKLSQATGQGD--REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
AVK +++A+ + E+E L + H N+++L +V E G L D
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 232 WL--RNQAASLDWGKRCKIVAS------------------NILLND---DFEAKISDFGL 268
+ R + + D + K V S NILL D + KI DFGL
Sbjct: 111 EIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
Query: 269 ARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT Y+ PE G E+ DV+S GVIL L++G P
Sbjct: 171 STCFQQNTKMKDRI--GTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 178 LSQATGQGDREFAAEMETLGMVKHQN--LVELLGYCSVDEEKLLVYEYMVKGSLD--DWL 233
L +A Q + E+ L ++ + ++ L Y D+ +Y M G++D WL
Sbjct: 62 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 118
Query: 234 RNQAASLDWGKRCK---------------IVASNI----LLNDDFEAKISDFGLA-RLIS 273
+ + + W ++ IV S++ L D K+ DFG+A ++
Sbjct: 119 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 178
Query: 274 DCESHVSTVVAGTIGYVPPE-YGGTGKATERG----------DVYSFGVILLELVTGKQP 322
D S V GT+ Y+PPE + E G DV+S G IL + GK P
Sbjct: 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 178 LSQATGQGDREFAAEMETLGMVKHQN--LVELLGYCSVDEEKLLVYEYMVKGSLD--DWL 233
L +A Q + E+ L ++ + ++ L Y D+ +Y M G++D WL
Sbjct: 46 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 102
Query: 234 RNQAASLDWGKRCK---------------IVASNI----LLNDDFEAKISDFGLA-RLIS 273
+ + + W ++ IV S++ L D K+ DFG+A ++
Sbjct: 103 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 162
Query: 274 DCESHVSTVVAGTIGYVPPE-YGGTGKATERG----------DVYSFGVILLELVTGKQP 322
D S V GT+ Y+PPE + E G DV+S G IL + GK P
Sbjct: 163 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYC----SVDE-EKLLVY 221
G VAVKKLS Q+ R + E+ L +KH+N++ LL S++E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 105
Query: 222 EYMVKGSLDDWLRNQAAS--------------LDWGKRCKIV-----ASNILLNDDFEAK 262
+++ L++ ++ Q + L + I+ SN+ +N+D E K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYG-GTGKATERGDVYSFGVILLELVTGK 320
I D GLAR D T T Y PE + D++S G I+ EL+TG+
Sbjct: 166 ILDGGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 42/237 (17%)
Query: 174 AVKKLSQATGQGD--REFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD 231
AVK +++A+ + E+E L + H N+++L +V E G L D
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 232 WL--RNQAASLDWGKRCKIVAS------------------NILLND---DFEAKISDFGL 268
+ R + + D + K V S NILL D + KI DFGL
Sbjct: 111 EIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
Query: 269 ARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFE 328
+ + GT Y+ PE G E+ DV+S GVIL L++G P
Sbjct: 171 STCFQQNTKMKDRI--GTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFY---- 223
Query: 329 DKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQI-------ATGCISN 378
G+N D + + + A ++ ++ ++K + KML AT C+ +
Sbjct: 224 ---GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 178 LSQATGQGDREFAAEMETLGMVKHQN--LVELLGYCSVDEEKLLVYEYMVKGSLD--DWL 233
L +A Q + E+ L ++ + ++ L Y D+ +Y M G++D WL
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 146
Query: 234 RNQAASLDWGKRCK---------------IVASNI----LLNDDFEAKISDFGLA-RLIS 273
+ + + W ++ IV S++ L D K+ DFG+A ++
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 206
Query: 274 DCESHVSTVVAGTIGYVPPE-YGGTGKATERG----------DVYSFGVILLELVTGKQP 322
D S V GT+ Y+PPE + E G DV+S G IL + GK P
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 174 AVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
A K + + + ++ E++ L H N+V+LL + ++ E+ G++D +
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
Query: 234 ----------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLI 272
+ +L++ KI+ A NIL D + K++DFG++
Sbjct: 99 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 158
Query: 273 SDCESHVSTVVAGTIGYVPPEYGGTGKATER-----GDVYSFGVILLELVTGKQP 322
+ GT ++ PE + +R DV+S G+ L+E+ + P
Sbjct: 159 TRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 26/177 (14%)
Query: 171 KTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLD 230
+ + + + + + + + E+ L ++ H N+++L + LV E G L
Sbjct: 65 RAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124
Query: 231 DWL--RNQAASLDWGKRCKIVAS------------------NILLND---DFEAKISDFG 267
D + R + +D K V S N+LL D KI DFG
Sbjct: 125 DEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFG 184
Query: 268 LARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTG 324
L+ + + + + GT Y+ PE K E+ DV+S GVIL L+ G P G
Sbjct: 185 LSAVFENQKKMKERL--GTAYYIAPEVL-RKKYDEKCDVWSIGVILFILLAGYPPFG 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLXQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 178 LSQATGQGDREFAAEMETLGMVKHQN--LVELLGYCSVDEEKLLVYEYMVKGSLD--DWL 233
L +A Q + E+ L ++ + ++ L Y D+ +Y M G++D WL
Sbjct: 43 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 99
Query: 234 RNQAASLDWGKRCK---------------IVASNI----LLNDDFEAKISDFGLA-RLIS 273
+ + + W ++ IV S++ L D K+ DFG+A ++
Sbjct: 100 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 159
Query: 274 DCESHVSTVVAGTIGYVPPE-YGGTGKATERG----------DVYSFGVILLELVTGKQP 322
D S V GT+ Y+PPE + E G DV+S G IL + GK P
Sbjct: 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 29/175 (16%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + +V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDD-----WLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKIS 264
E M ++ LD L + I+ SNI++ D KI
Sbjct: 109 ELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
DFGLAR + S + T T Y PE E D++S GVI+ E++ G
Sbjct: 169 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 29/175 (16%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + +V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDD-----WLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKIS 264
E M ++ LD L + I+ SNI++ D KI
Sbjct: 109 ELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
DFGLAR + S + T T Y PE E D++S GVI+ E++ G
Sbjct: 169 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 178 LSQATGQGDREFAAEMETLGMVKHQN--LVELLGYCSVDEEKLLVYEYMVKGSLD--DWL 233
L +A Q + E+ L ++ + ++ L Y D+ +Y M G++D WL
Sbjct: 42 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 98
Query: 234 RNQAASLDWGKRCK---------------IVASNI----LLNDDFEAKISDFGLA-RLIS 273
+ + + W ++ IV S++ L D K+ DFG+A ++
Sbjct: 99 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 158
Query: 274 DCESHVSTVVAGTIGYVPPE-YGGTGKATERG----------DVYSFGVILLELVTGKQP 322
D S V GT+ Y+PPE + E G DV+S G IL + GK P
Sbjct: 159 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 178 LSQATGQGDREFAAEMETLGMVKHQN--LVELLGYCSVDEEKLLVYEYMVKGSLD--DWL 233
L +A Q + E+ L ++ + ++ L Y D+ +Y M G++D WL
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 146
Query: 234 RNQAASLDWGKRCK---------------IVASNI----LLNDDFEAKISDFGLA-RLIS 273
+ + + W ++ IV S++ L D K+ DFG+A ++
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 206
Query: 274 DCESHVSTVVAGTIGYVPPE-YGGTGKATERG----------DVYSFGVILLELVTGKQP 322
D S V GT+ Y+PPE + E G DV+S G IL + GK P
Sbjct: 207 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 35/184 (19%)
Query: 173 VAVKKLSQATGQGDREFAAEMETLGMV-KHQNLVELLGYC------SVDEEKLLVYEYMV 225
+A K+ TG + E E+ L H+N+ G +D++ LV E+
Sbjct: 51 LAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG 110
Query: 226 KGSLDDWLRNQAASL---DW-GKRCK------------------IVASNILLNDDFEAKI 263
GS+ D ++N + +W C+ I N+LL ++ E K+
Sbjct: 111 AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKL 170
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATE-----RGDVYSFGVILLELVT 318
DFG++ + +T + GT ++ PE + + + D++S G+ +E+
Sbjct: 171 VDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE 229
Query: 319 GKQP 322
G P
Sbjct: 230 GAPP 233
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 36/226 (15%)
Query: 170 GKTVAVKKLS--QATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
G+ AVK +S Q + D+E E++ L + H N+++L + LV E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110
Query: 227 GSLDDWL--RNQAASLDWGKRCKIVAS------------------NILL---NDDFEAKI 263
G L D + R + + +D + + V S N+LL + D +I
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 170
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPT 323
DFGL+ + + GT Y+ PE G E+ DV+S GVIL L++G P
Sbjct: 171 IDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF 227
Query: 324 GPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML 369
+G N D + + K + E+ ++ ++K + KML
Sbjct: 228 -------NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 266
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 36/226 (15%)
Query: 170 GKTVAVKKLS--QATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
G+ AVK +S Q + D+E E++ L + H N+++L + LV E
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 227 GSLDDWL--RNQAASLDWGKRCKIVAS------------------NILL---NDDFEAKI 263
G L D + R + + +D + + V S N+LL + D +I
Sbjct: 134 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 193
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPT 323
DFGL+ + + GT Y+ PE G E+ DV+S GVIL L++G P
Sbjct: 194 IDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF 250
Query: 324 GPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML 369
+G N D + + K + E+ ++ ++K + KML
Sbjct: 251 -------NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 289
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 204 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 260
Query: 321 QP 322
P
Sbjct: 261 PP 262
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 36/226 (15%)
Query: 170 GKTVAVKKLS--QATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
G+ AVK +S Q + D+E E++ L + H N+++L + LV E
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 227 GSLDDWL--RNQAASLDWGKRCKIVAS------------------NILL---NDDFEAKI 263
G L D + R + + +D + + V S N+LL + D +I
Sbjct: 135 GELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI 194
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPT 323
DFGL+ + + GT Y+ PE G E+ DV+S GVIL L++G P
Sbjct: 195 IDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF 251
Query: 324 GPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKML 369
+G N D + + K + E+ ++ ++K + KML
Sbjct: 252 -------NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 290
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 102
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 103 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 160 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 256 NDDFEAKISDFGLAR---LISDCESHVSTVVAGTIGYVPPEYGGTGKAT--ERGDVYSFG 310
N FE K+ DFGL++ +++ E + T AGT +V PE T + + D +S G
Sbjct: 204 NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 311 VILLELVTGKQPTGPEFEDKD 331
V+L L+ G P P D D
Sbjct: 264 VLLHLLLMGAVPF-PGVNDAD 283
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 165 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 221
Query: 321 QP 322
P
Sbjct: 222 PP 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 101
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 102 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 158
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 159 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 35/179 (19%)
Query: 174 AVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
A K + + + ++ E++ L H N+V+LL + ++ E+ G++D +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 234 ----------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA--- 269
+ +L++ KI+ A NIL D + K++DFG++
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 185
Query: 270 -RLISDCESHVSTVVAGTIGYVPPEYGGTGKATER-----GDVYSFGVILLELVTGKQP 322
R I +S + GT ++ PE + +R DV+S G+ L+E+ + P
Sbjct: 186 TRXIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 158 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 214
Query: 321 QP 322
P
Sbjct: 215 PP 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 102
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 103 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 160 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 159 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 215
Query: 321 QP 322
P
Sbjct: 216 PP 217
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 164 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 220
Query: 321 QP 322
P
Sbjct: 221 PP 222
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 210 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 266
Query: 321 QP 322
P
Sbjct: 267 PP 268
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 109
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 110 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 167 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 35/179 (19%)
Query: 174 AVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
A K + + + ++ E++ L H N+V+LL + ++ E+ G++D +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 234 ----------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA--- 269
+ +L++ KI+ A NIL D + K++DFG++
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 185
Query: 270 -RLISDCESHVSTVVAGTIGYVPPEYGGTGKATER-----GDVYSFGVILLELVTGKQP 322
R I +S + GT ++ PE + +R DV+S G+ L+E+ + P
Sbjct: 186 TRTIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 160 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 216
Query: 321 QP 322
P
Sbjct: 217 PP 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 31/189 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
K + KKLS + ++ E ++KH N+V L S + LV++ + G L
Sbjct: 34 AKIINTKKLS---ARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 230 -DDWLRNQAASLDWGKRC-------------------KIVASNILLNDDFEA---KISDF 266
+D + + S C + N+LL + K++DF
Sbjct: 91 FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADF 150
Query: 267 GLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPE 326
GLA + + AGT GY+ PE + D+++ GVIL L+ G P
Sbjct: 151 GLAIEVQG-DQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGY----PP 205
Query: 327 FEDKDGENL 335
F D+D L
Sbjct: 206 FWDEDQHKL 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 160 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 216
Query: 321 QP 322
P
Sbjct: 217 PP 218
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 166 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 222
Query: 321 QP 322
P
Sbjct: 223 PP 224
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 110/280 (39%), Gaps = 81/280 (28%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD-------EEKLLVYE 222
G+ VAVK T + E+ +++H+N+ LG+ + D + L+ +
Sbjct: 60 GEKVAVKVFF-TTEEASWFRETEIYQTVLMRHENI---LGFIAADIKGTGSWTQLYLITD 115
Query: 223 YMVKGSLDDWLRNQAASLDWGKRCKIVAS-----------------------------NI 253
Y GSL D+L+ + +LD K+ S NI
Sbjct: 116 YHENGSLYDYLK--STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173
Query: 254 LLNDDFEAKISDFGLA-RLISDC-ESHVS-TVVAGTIGYVPPEY------GGTGKATERG 304
L+ + I+D GLA + ISD E + GT Y+PPE ++
Sbjct: 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA 233
Query: 305 DVYSFGVILLEL----VTGK------------QPTGPEFEDKDGENLVDWVLHMMKNEQA 348
D+YSFG+IL E+ V+G P+ P +ED M+
Sbjct: 234 DMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYED-------------MREIVC 280
Query: 349 DEVLDPAVLNA-NSKPTMLKMLQIATGCISNDPTVRPTML 387
+ L P+ N +S + +M ++ T C +++P R T L
Sbjct: 281 IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTAL 320
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 49 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 107
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 108 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 164
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 165 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 109
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 110 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 167 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 21/129 (16%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERG--- 304
I SN+L+ +D KI+DFG++ ++ +S V GT ++ PE + G
Sbjct: 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKAL 221
Query: 305 DVYSFGVILLELVTGKQP---------------TGPEFEDKD--GENLVDWVLHMMKNEQ 347
DV++ GV L V G+ P EF D+ E+L D + M+
Sbjct: 222 DVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNP 281
Query: 348 ADEVLDPAV 356
++ P +
Sbjct: 282 ESRIVVPEI 290
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 248 IVASNILL---NDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERG 304
I NILL N KI DFGL+ S + + GT Y+ PE K E+
Sbjct: 172 IKPENILLENKNSLLNIKIVDFGLSSFFS--KDYKLRDRLGTAYYIAPEVLKK-KYNEKC 228
Query: 305 DVYSFGVILLELVTGKQPTGPE 326
DV+S GVI+ L+ G P G +
Sbjct: 229 DVWSCGVIMYILLCGYPPFGGQ 250
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 35/183 (19%)
Query: 170 GKTVAVKKLSQATGQGD------REFAAEMETLGMVKHQNLVELLGYCSVDE-----EKL 218
G VA+K + G+ RE A + L +H N+V L+ C+ +
Sbjct: 29 GHFVALKSVRVPNGEEGLPISTVREVAL-LRRLEAFEHPNVVRLMDVCATSRTDREIKVT 87
Query: 219 LVYEYM---VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLND 257
LV+E++ ++ LD D +R LD+ IV NIL+
Sbjct: 88 LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS 147
Query: 258 DFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELV 317
K++DFGLAR+ S + VV T+ Y PE D++S G I E+
Sbjct: 148 GGTVKLADFGLARIYSYQMALAPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
Query: 318 TGK 320
K
Sbjct: 206 RRK 208
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 174 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 230
Query: 321 QP 322
P
Sbjct: 231 PP 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 147 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 204 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 35/183 (19%)
Query: 170 GKTVAVKKLSQATGQGD------REFAAEMETLGMVKHQNLVELLGYCSVDE-----EKL 218
G VA+K + G+ RE A + L +H N+V L+ C+ +
Sbjct: 29 GHFVALKSVRVPNGEEGLPISTVREVAL-LRRLEAFEHPNVVRLMDVCATSRTDREIKVT 87
Query: 219 LVYEYM---VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLND 257
LV+E++ ++ LD D +R LD+ IV NIL+
Sbjct: 88 LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS 147
Query: 258 DFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELV 317
K++DFGLAR+ S + VV T+ Y PE D++S G I E+
Sbjct: 148 GGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
Query: 318 TGK 320
K
Sbjct: 206 RRK 208
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 29/179 (16%)
Query: 170 GKTVAVKKLS--QATGQGDRE-FAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVK 226
G+ AVK +S Q + D+E E++ L + H N+ +L + LV E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 227 GSLDD---------------WLRNQAASLDWGKRCKIVA-----SNILL---NDDFEAKI 263
G L D +R + + + + KIV N+LL + D +I
Sbjct: 111 GELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRI 170
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
DFGL+ + + GT Y+ PE G E+ DV+S GVIL L++G P
Sbjct: 171 IDFGLSTHFEASKKXKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 29/176 (16%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 222 EYM-------VKGSLDD-----WLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKIS 264
E M ++ LD L + I+ SNI++ D KI
Sbjct: 109 ELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 168
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 169 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + +V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLSQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR + S + T T Y PE E D++S G I+ E++ G
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 147 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 204 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 29/180 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
G A K + + + ++ E+E L H +V+LLG D + ++ E+ G++
Sbjct: 36 GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 95
Query: 230 DDWL----------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
D + R +L++ +I+ A N+L+ + + +++DFG+
Sbjct: 96 DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGV 155
Query: 269 -ARLISDCESHVSTVVAGTIGYVPPEY--GGTGKATE---RGDVYSFGVILLELVTGKQP 322
A+ + + S + GT ++ PE T K T + D++S G+ L+E+ + P
Sbjct: 156 SAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 29/176 (16%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 101
Query: 222 EYM-------VKGSLDD-----WLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKIS 264
E M ++ LD L + I+ SNI++ D KI
Sbjct: 102 ELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 161
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 162 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D++S GVI+ L+ G
Sbjct: 158 KLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 214
Query: 321 QP 322
P
Sbjct: 215 PP 216
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 171 KTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM------ 224
K V V K + + G + E M+KH ++VELL S D +V+E+M
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC 114
Query: 225 ---VKGSLDDWLRNQAASLDWGKRC----KIVASNILLNDDFE--------------AKI 263
VK + ++ ++A + + ++ + N +++ D + K+
Sbjct: 115 FEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL 174
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
FG+A + + V+ GT ++ PE + DV+ GVIL L++G P
Sbjct: 175 GGFGVAIQLGE-SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 38/180 (21%)
Query: 178 LSQATGQGDREFAAEMETLGMVKHQN--LVELLGYCSVDEEKLLVYEYMVKGSLD--DWL 233
L +A Q + E+ L ++ + ++ L Y D+ +Y M G++D WL
Sbjct: 62 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 118
Query: 234 RNQAASLDWGKRCK---------------IVASNI----LLNDDFEAKISDFGLA-RLIS 273
+ + + W ++ IV S++ L D K+ DFG+A ++
Sbjct: 119 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 178
Query: 274 DCESHVSTVVAGTIGYVPPE-YGGTGKATERG----------DVYSFGVILLELVTGKQP 322
D V GT+ Y+PPE + E G DV+S G IL + GK P
Sbjct: 179 DXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 29/180 (16%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSL 229
G A K + + + ++ E+E L H +V+LLG D + ++ E+ G++
Sbjct: 44 GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103
Query: 230 DDWL----------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGL 268
D + R +L++ +I+ A N+L+ + + +++DFG+
Sbjct: 104 DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGV 163
Query: 269 -ARLISDCESHVSTVVAGTIGYVPPEY--GGTGKATE---RGDVYSFGVILLELVTGKQP 322
A+ + + S + GT ++ PE T K T + D++S G+ L+E+ + P
Sbjct: 164 SAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 171 KTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYM------ 224
K V V K + + G + E M+KH ++VELL S D +V+E+M
Sbjct: 57 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC 116
Query: 225 ---VKGSLDDWLRNQAASLDWGKRC----KIVASNILLNDDFE--------------AKI 263
VK + ++ ++A + + ++ + N +++ D + K+
Sbjct: 117 FEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL 176
Query: 264 SDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
FG+A + + V+ GT ++ PE + DV+ GVIL L++G P
Sbjct: 177 GGFGVAIQLGE-SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 52 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 110
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 111 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 167
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR V VV T Y PE E D++S G I+ E++ G
Sbjct: 168 KILDFGLARTAGTSFMMVPFVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 29/176 (16%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ LV
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 222 EYM-------VKGSLDD-----WLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKIS 264
E M ++ LD L + I+ SNI++ D KI
Sbjct: 109 ELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 168
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 169 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 28/156 (17%)
Query: 191 AEMETLGMVKHQNLVELLGYCSVDE-----EKLLVYEYM---VKGSLD------------ 230
A + L +H N+V L+ C+ + LV+E++ ++ LD
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 231 -DWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVA 284
D +R LD+ IV NIL+ K++DFGLAR+ S + VV
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV- 181
Query: 285 GTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
T+ Y PE D++S G I E+ K
Sbjct: 182 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 38/180 (21%)
Query: 178 LSQATGQGDREFAAEMETLGMVKHQN--LVELLGYCSVDEEKLLVYEYMVKGSLD--DWL 233
L +A Q + E+ L ++ + ++ L Y D+ +Y M G++D WL
Sbjct: 90 LEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWL 146
Query: 234 RNQAASLDWGKRCK---------------IVASNI----LLNDDFEAKISDFGLA-RLIS 273
+ + + W ++ IV S++ L D K+ DFG+A ++
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQP 206
Query: 274 DCESHVSTVVAGTIGYVPPE-YGGTGKATERG----------DVYSFGVILLELVTGKQP 322
D S V G + Y+PPE + E G DV+S G IL + GK P
Sbjct: 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 258 DFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELV 317
D KI+DFGL++++ + V GT GY PE D++S G+I L+
Sbjct: 187 DAPLKIADFGLSKIVE--HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL 244
Query: 318 TGKQPTGPEFEDKDGENLV 336
G +P F D+ G+ +
Sbjct: 245 CGFEP----FYDERGDQFM 259
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR + S + T T Y PE E D++S G I+ E++ G
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR + S + T T Y PE E D++S G I+ E++ G
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Query: 176 KKLSQATGQG--DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
K+ S+A+ +G E E+ L V H N++ L + +L+ E + G L D+L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 234 RNQAA---------------SLDWGKRCKIV-----ASNILLNDDF----EAKISDFGLA 269
+ + +++ KI NI+L D K+ DFGLA
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I D + + GT +V PE D++S GVI L++G P
Sbjct: 167 HEIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 29/175 (16%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + +V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDD-----WLRNQAASLDWGKRCKIV-----ASNILLNDDFEAKIS 264
E M ++ LD L + I+ SNI++ D KI
Sbjct: 109 ELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
DFGLAR + S + T T Y PE E D++S G I+ E++ G
Sbjct: 169 DFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 35/179 (19%)
Query: 174 AVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
A K + + + ++ E++ L H N+V+LL + ++ E+ G++D +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 234 ----------------RNQAASLDWGKRCKIV-----ASNILLNDDFEAKISDFGLA--- 269
+ +L++ KI+ A NIL D + K++DFG++
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 185
Query: 270 -RLISDCESHVSTVVAGTIGYVPPEYGGTGKATER-----GDVYSFGVILLELVTGKQP 322
R I + + GT ++ PE + +R DV+S G+ L+E+ + P
Sbjct: 186 TRXIQRRDXFI-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Query: 176 KKLSQATGQG--DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
K+ S+A+ +G E E+ L V H N++ L + +L+ E + G L D+L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 234 RNQAA---------------SLDWGKRCKIV-----ASNILLNDDF----EAKISDFGLA 269
+ + +++ KI NI+L D K+ DFGLA
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I D + + GT +V PE D++S GVI L++G P
Sbjct: 167 HEIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 110 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR + S + T T Y PE E D++S G I+ E++ G
Sbjct: 167 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLSQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR + S + T T Y PE E D++S G I+ E++ G
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Query: 176 KKLSQATGQG--DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
K+ S+A+ +G E E+ L V H N++ L + +L+ E + G L D+L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 234 RNQAA---------------SLDWGKRCKIV-----ASNILLNDDF----EAKISDFGLA 269
+ + +++ KI NI+L D K+ DFGLA
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I D + + GT +V PE D++S GVI L++G P
Sbjct: 167 HEIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLSQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR + S + T T Y PE E D++S G I+ E++ G
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Query: 176 KKLSQATGQG--DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
K+ S+A+ +G E E+ L V H N++ L + +L+ E + G L D+L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 234 RNQAA---------------SLDWGKRCKIV-----ASNILLNDDF----EAKISDFGLA 269
+ + +++ KI NI+L D K+ DFGLA
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I D + + GT +V PE D++S GVI L++G P
Sbjct: 167 HEIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 35/183 (19%)
Query: 170 GKTVAVKKLSQATGQGD------REFAAEMETLGMVKHQNLVELLGYCSVDE-----EKL 218
G VA+K + G+ RE A + L +H N+V L+ C+ +
Sbjct: 29 GHFVALKSVRVPNGEEGLPISTVREVAL-LRRLEAFEHPNVVRLMDVCATSRTDREIKVT 87
Query: 219 LVYEYM---VKGSLD-------------DWLRNQAASLDWGKRCKIV-----ASNILLND 257
LV+E++ ++ LD D +R LD+ IV NIL+
Sbjct: 88 LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS 147
Query: 258 DFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELV 317
K++DFGLAR+ S + VV T+ Y PE D++S G I E+
Sbjct: 148 GGTVKLADFGLARIYSYQMALDPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
Query: 318 TGK 320
K
Sbjct: 206 RRK 208
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 11/78 (14%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVV-----------AGTIGYVPPEYGGTGK 299
SNI D K+ DFGL + E + + GT Y+ PE
Sbjct: 193 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNN 252
Query: 300 ATERGDVYSFGVILLELV 317
+ + D++S G+IL EL+
Sbjct: 253 YSHKVDIFSLGLILFELL 270
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Query: 176 KKLSQATGQG--DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
K+ S+A+ +G E E+ L V H N++ L + +L+ E + G L D+L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 234 RNQAA---------------SLDWGKRCKIV-----ASNILLNDDF----EAKISDFGLA 269
+ + +++ KI NI+L D K+ DFGLA
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 270 RLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
I D + + GT +V PE D++S GVI L++G P
Sbjct: 167 HEIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 22/219 (10%)
Query: 170 GKTVAVKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKL-LVYEYMVKGS 228
K V V S+A G+ M L +KH +L L + E L + +V+
Sbjct: 88 AKLVGVSLRSRAKGR----LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 229 LDDWLRNQAASLDWGKRCKIVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAG-TI 287
+D + S + A N +L +D ++DFGL+R I + + + +
Sbjct: 144 VDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPV 203
Query: 288 GYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVLHMMKNEQ 347
++ E T DV++FGV + E++T Q E+ + + ++++ + +Q
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYNYLIGGNRLKQ 260
Query: 348 ADEVLDPAVLNANSKPTMLKMLQIATGCISNDPTVRPTM 386
E ++ ++ + C S DP RP+
Sbjct: 261 PPECME-------------EVYDLMYQCWSADPKQRPSF 286
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 66/173 (38%), Gaps = 26/173 (15%)
Query: 175 VKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD--W 232
+KK S T E+ L + H N+++L + LV E G L D
Sbjct: 54 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII 113
Query: 233 LRNQAASLDWGKRCKIVAS------------------NILLND---DFEAKISDFGLARL 271
LR + + +D K V S N+LL D KI DFGL+
Sbjct: 114 LRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH 173
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTG 324
+ GT Y+ PE K E+ DV+S GVIL L+ G P G
Sbjct: 174 FEVGGKMKERL--GTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPPFG 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 30/174 (17%)
Query: 176 KKLSQATGQG--DREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWL 233
K+ S+A+ +G E E+ L V H N++ L + +L+ E + G L D+L
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 234 RNQAASLDWGKRCKIVAS---------------------NILLNDDF----EAKISDFGL 268
Q SL + + NI+L D K+ DFGL
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 269 ARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
A I D + + GT +V PE D++S GVI L++G P
Sbjct: 166 AHEIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 251 SNILLN-DDFEAKISDFGLARLISDCESHVSTVVAGTIG--YVPPE-YGGTGKATERGDV 306
+N+ +N +D KI DFGLAR++ SH + G + Y P T+ D+
Sbjct: 149 ANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDM 208
Query: 307 YSFGVILLELVTGK 320
++ G I E++TGK
Sbjct: 209 WAAGCIFAEMLTGK 222
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 170 GKTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLG----------------- 209
G+ VA+KKLS Q+ R + E+ L ++H+N++ LL
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 210 --YCSVDEEKLLVYEYMVKGSLDDWLRNQAASLDWGKRCKIV-----ASNILLNDDFEAK 262
+ D +K++ E+ + + + L + +V N+ +N+D E K
Sbjct: 126 MPFMQTDLQKIMGMEF-SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELK 184
Query: 263 ISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
I DFGLAR ++ ++ V P + D++S G I+ E++TGK
Sbjct: 185 ILDFGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTG-KATERGDVYSFG 310
N+ +N+D E KI DFGLAR +D E T T Y PE + + D++S G
Sbjct: 156 NLAVNEDCELKILDFGLARH-ADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 211
Query: 311 VILLELVTGK 320
I+ E++TGK
Sbjct: 212 CIMAEMLTGK 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTG 319
KI DFGLAR + S + T T Y PE E D++S G I+ E++ G
Sbjct: 166 KILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 262 KISDFGLARLISDCESHVS-TVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
K++DFG A+ + SH S T T YV PE G K + D +S GVI L+ G
Sbjct: 204 KLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGY 260
Query: 321 QP 322
P
Sbjct: 261 PP 262
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 251 SNILLNDDFEAKISDFGLAR-LISDCESH--VSTVVAGTIGYVPPEYG-GTGKATERGDV 306
SN+L+N++ E KI DFG+AR L + H T T Y PE + T+ D+
Sbjct: 188 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 247
Query: 307 YSFGVILLELVTGKQ 321
+S G I E++ +Q
Sbjct: 248 WSVGCIFGEMLARRQ 262
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 248 IVASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGY-----VPPEYGGTGKATE 302
+ SN+L+N + K+ DFG++ + D S T+ AG Y + PE G +
Sbjct: 180 VKPSNVLINALGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERINPELNQKGYSV- 236
Query: 303 RGDVYSFGVILLELVTGKQP 322
+ D++S G+ ++EL + P
Sbjct: 237 KSDIWSLGITMIELAILRFP 256
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 252 NILLNDDF---EAKISDFGLARLISD-CESHVSTVVAGTIGYVPPEYGGTGKATERGDVY 307
NILL+ + + KI DFG++R I CE + GT Y+ PE T D++
Sbjct: 161 NILLSSIYPLGDIKIVDFGMSRKIGHACELRE---IMGTPEYLAPEILNYDPITTATDMW 217
Query: 308 SFGVILLELVTGKQP 322
+ G+I L+T P
Sbjct: 218 NIGIIAYMLLTHTSP 232
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 251 SNILLNDDFEAKISDFGLAR-LISDCESH--VSTVVAGTIGYVPPEYG-GTGKATERGDV 306
SN+L+N++ E KI DFG+AR L + H T T Y PE + T+ D+
Sbjct: 187 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 246
Query: 307 YSFGVILLELVTGKQ 321
+S G I E++ +Q
Sbjct: 247 WSVGCIFGEMLARRQ 261
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 11/78 (14%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVV-----------AGTIGYVPPEYGGTGK 299
SNI D K+ DFGL + E + + GT Y+ PE
Sbjct: 147 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS 206
Query: 300 ATERGDVYSFGVILLELV 317
+ + D++S G+IL EL+
Sbjct: 207 YSHKVDIFSLGLILFELL 224
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 66/173 (38%), Gaps = 26/173 (15%)
Query: 175 VKKLSQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDD--W 232
+KK S T E+ L + H N+++L + LV E G L D
Sbjct: 37 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII 96
Query: 233 LRNQAASLDWGKRCKIVAS------------------NILLND---DFEAKISDFGLARL 271
LR + + +D K V S N+LL D KI DFGL+
Sbjct: 97 LRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH 156
Query: 272 ISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQPTG 324
+ GT Y+ PE K E+ DV+S GVIL L+ G P G
Sbjct: 157 FEVGGKMKERL--GTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPPFG 206
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 55 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 113
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 114 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 170
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 171 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 102
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 103 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR + S + T T Y PE E D++S G I+ E+V K
Sbjct: 160 KILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 251 SNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATE--RGDVYS 308
SNIL++ + K+SDFG + + D + S GT ++PPE+ + + D++S
Sbjct: 181 SNILMDKNGRVKLSDFGESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWS 237
Query: 309 FGVILLELVTGKQP 322
G+ L + P
Sbjct: 238 LGICLYVMFYNVVP 251
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 4 LPNLLYLNLADNRLEGEVPR--SGICQNLSIMSLTGN 38
L +L YL+LA+N+ GE+P SG C L+ + L+GN
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGN 301
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 6 NLLYLNLADNRLEGEVPR-SGICQNLSIMSLTGNKDLCGKIMG--SDCKIL 53
NL +++L++NRL GE+P+ G +NL+I+ L+ N G I DC+ L
Sbjct: 488 NLNWISLSNNRLTGEIPKWIGRLENLAILKLS-NNSFSGNIPAELGDCRSL 537
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 3 SLPNLLYLNLADNRLEGEVP-RSGICQNLSIMSLTGNKDLCGKI 45
S+P L LNL N + G +P G + L+I+ L+ NK L G+I
Sbjct: 651 SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK-LDGRI 693
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 4 LPNLLYLNLADNRLEGEVPR--SGICQNLSIMSLTGN 38
L +L YL+LA+N+ GE+P SG C L+ + L+GN
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGN 304
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 6 NLLYLNLADNRLEGEVPR-SGICQNLSIMSLTGNKDLCGKIMG--SDCKIL 53
NL +++L++NRL GE+P+ G +NL+I+ L+ N G I DC+ L
Sbjct: 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLS-NNSFSGNIPAELGDCRSL 540
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 3 SLPNLLYLNLADNRLEGEVP-RSGICQNLSIMSLTGNKDLCGKI 45
S+P L LNL N + G +P G + L+I+ L+ NK L G+I
Sbjct: 654 SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK-LDGRI 696
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEY--GGTGKATERGDVYSF 309
NI++ +DF K+ DFG A + + GTI Y PE G + E +++S
Sbjct: 160 NIVIAEDFTIKLIDFGSAAYLE--RGKLFYTFCGTIEYCAPEVLMGNPYRGPEL-EMWSL 216
Query: 310 GVILLELVTGKQP 322
GV L LV + P
Sbjct: 217 GVTLYTLVFEENP 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 19/126 (15%)
Query: 261 AKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI D GLA L + + V GT + PE K E DVY+FG LE T +
Sbjct: 171 VKIGDLGLATLKR---ASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSE 226
Query: 321 QPTGPEFEDKDGENLVDWVLHMMKNEQADEVLDPAVLNANSKPTMLKMLQIATGCISNDP 380
P E ++ + V +K D+V P V +I GCI +
Sbjct: 227 YPYS---ECQNAAQIYRRVTSGVKPASFDKVAIPEV------------KEIIEGCIRQNK 271
Query: 381 TVRPTM 386
R ++
Sbjct: 272 DERYSI 277
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 71/179 (39%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR VV T Y PE E D++S G I+ E+V K
Sbjct: 166 KILDFGLARTAGTSFMMEPEVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQ 321
K++DFG A+ + + T YV PE G K + D++S GVI+ L+ G
Sbjct: 152 KLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 208
Query: 322 P 322
P
Sbjct: 209 P 209
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 25/165 (15%)
Query: 196 LGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQ---------------AASL 240
L VKH LV L ++ V +Y+ G L L+ + A++L
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASAL 152
Query: 241 DWGKRCKIV-----ASNILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYG 295
+ IV NILL+ ++DFGL + + S ST GT Y+ PE
Sbjct: 153 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGTPEYLAPEVL 211
Query: 296 GTGKATERGDVYSFGVILLELVTGKQPTGPEFEDKDGENLVDWVL 340
D + G +L E++ G P F ++ + D +L
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGL----PPFYSRNTAEMYDNIL 252
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 27/178 (15%)
Query: 170 GKTVAVKKLSQAT-GQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
K + ++LS + G E E+ L ++H N++ L + +L+ E + G
Sbjct: 42 AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGE 101
Query: 229 LDDWLRNQAASLD-----------------WGKRCK---IVASNILLND----DFEAKIS 264
L D+L + + + KR + NI+L D + K+
Sbjct: 102 LFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI 161
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
DFG+A I + + GT +V PE D++S GVI L++G P
Sbjct: 162 DFGIAHKIEAGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQ 321
K++DFG A+ + + T YV PE G K + D++S GVI+ L+ G
Sbjct: 171 KLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 227
Query: 322 P 322
P
Sbjct: 228 P 228
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 27/178 (15%)
Query: 170 GKTVAVKKLSQAT-GQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
K + ++LS + G E E+ L ++H N++ L + +L+ E + G
Sbjct: 35 AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGE 94
Query: 229 LDDWLRNQAASLD-----------------WGKRCK---IVASNILLND----DFEAKIS 264
L D+L + + + KR + NI+L D + K+
Sbjct: 95 LFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI 154
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
DFG+A I + + GT +V PE D++S GVI L++G P
Sbjct: 155 DFGIAHKIEAGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 174 AVKKLSQATGQGDREFAAEMETLGMVK-HQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
AVK + + G E+E L + H+N++EL+ + ++ LV+E M GS+
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 233 LRNQ---------------AASLDWGKRCKIV-----ASNILL---NDDFEAKISDFGLA 269
+ + A++LD+ I NIL N KI DFGL
Sbjct: 102 IHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLG 161
Query: 270 ---RLISDCESHVST----VVAGTIGYVPPEY--GGTGKAT---ERGDVYSFGVILLELV 317
+L DC S +ST G+ Y+ PE + +A+ +R D++S GVIL L+
Sbjct: 162 SGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 318 TGKQP 322
+G P
Sbjct: 221 SGYPP 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 71/179 (39%), Gaps = 35/179 (19%)
Query: 171 KTVAVKKLS---QATGQGDREFAAEMETLGMVKHQNLVELLGYCSVD------EEKLLVY 221
+ VA+KKLS Q R + E+ + V H+N++ LL + ++ +V
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 EYM-------VKGSLDDWLRNQAASLDWGKRCKIV-------------ASNILLNDDFEA 261
E M ++ LD + + L + C I SNI++ D
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGK 320
KI DFGLAR VV T Y PE E D++S G I+ E+V K
Sbjct: 166 KILDFGLARTAGTSFMMEPEVV--TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N++++ K++DFGLA+ + + + GT Y+ PE + + D ++ GV
Sbjct: 171 NLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 312 ILLELVTGKQP 322
++ E+ G P
Sbjct: 227 LIYEMAAGYPP 237
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 251 SNILLNDDFEAKISDFGLARLI-SDCESHV 279
+N LLN D KI DFGLAR I SD + H+
Sbjct: 160 ANCLLNQDCSVKICDFGLARTINSDKDIHI 189
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+L++ K++DFG A+ + + + GT Y+ PE + + D ++ GV
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 312 ILLELVTGKQP 322
++ E+ G P
Sbjct: 227 LIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+L++ K++DFG A+ + + + GT Y+ PE + + D ++ GV
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 312 ILLELVTGKQP 322
++ E+ G P
Sbjct: 227 LIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+L++ K++DFG A+ + + + GT Y+ PE + + D ++ GV
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 312 ILLELVTGKQP 322
++ E+ G P
Sbjct: 227 LIYEMAAGYPP 237
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 15/78 (19%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSF-- 309
N+LL+ + K++D+G+ + ST GT Y+ PE RG+ Y F
Sbjct: 183 NVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAPE-------ILRGEDYGFSV 234
Query: 310 -----GVILLELVTGKQP 322
GV++ E++ G+ P
Sbjct: 235 DWWALGVLMFEMMAGRSP 252
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+L++ K++DFG A+ + + + GT Y+ PE + + D ++ GV
Sbjct: 172 NLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 312 ILLELVTGKQP 322
++ E+ G P
Sbjct: 228 LIYEMAAGYPP 238
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 69/178 (38%), Gaps = 27/178 (15%)
Query: 170 GKTVAVKKL-SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGS 228
K + ++L S G E E+ L ++H N++ L + +L+ E + G
Sbjct: 56 AKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGE 115
Query: 229 LDDWLRNQAASLD-----------------WGKRCK---IVASNILLND----DFEAKIS 264
L D+L + + + KR + NI+L D + K+
Sbjct: 116 LFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI 175
Query: 265 DFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
DFG+A I + + GT +V PE D++S GVI L++G P
Sbjct: 176 DFGIAHKIEAGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 251 SNILLNDDF----EAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
SNIL D+ +I DFG A+ + E+ + T +V PE D+
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLR-AENGLLMTPCYTANFVAPEVLERQGYDAACDI 203
Query: 307 YSFGVILLELVTGKQP--TGPE 326
+S GV+L ++TG P GP+
Sbjct: 204 WSLGVLLYTMLTGYTPFANGPD 225
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+LL+ + K++D+G+ + ++ GT Y+ PE D ++ GV
Sbjct: 151 NVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 209
Query: 312 ILLELVTGKQP 322
++ E++ G+ P
Sbjct: 210 LMFEMMAGRSP 220
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 10 LNLADNRLEGEVPRSGICQNLSIMSLTGNKDLCG 43
LN++ N L GE+P+ G Q + + NK LCG
Sbjct: 273 LNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 171 KTVAVKKL-----SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMV 225
+ VA+KK+ S+A +R E++ L + H N++ LL LV+++M
Sbjct: 36 QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM- 94
Query: 226 KGSLDDWLRNQAASL---------------------DWGKRCKIVASNILLNDDFEAKIS 264
+ L+ +++ + L W + +N+LL+++ K++
Sbjct: 95 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLA 154
Query: 265 DFGLARLI-SDCESHVSTVVAGTIGYVPPEYGGTGKATERG-DVYSFGVILLELV 317
DFGLA+ S ++ VV T Y PE + G D+++ G IL EL+
Sbjct: 155 DFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 50 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 109
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 168
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 169 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 50 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 109
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 168
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 169 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+L+++ +++DFG A+ + + + GT Y+ PE + + D ++ GV
Sbjct: 158 NLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 213
Query: 312 ILLELVTGKQP 322
++ E+ G P
Sbjct: 214 LIYEMAAGYPP 224
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+LL+ + K++D+G+ + ++ GT Y+ PE D ++ GV
Sbjct: 136 NVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 194
Query: 312 ILLELVTGKQP 322
++ E++ G+ P
Sbjct: 195 LMFEMMAGRSP 205
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 251 SNILLNDDFEAKISDFGLA-RLISDCESHVSTVVAGTIGY-----VPPEYGGTGKATERG 304
SN+L+N + K+ DFG++ L+ D + AG Y + PE G + +
Sbjct: 139 SNVLINALGQVKMCDFGISGYLVDDVAKDID---AGCKPYMAPERINPELNQKGYSV-KS 194
Query: 305 DVYSFGVILLELVTGKQP 322
D++S G+ ++EL + P
Sbjct: 195 DIWSLGITMIELAILRFP 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N+LL+ + K++D+G+ + ++ GT Y+ PE D ++ GV
Sbjct: 140 NVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 198
Query: 312 ILLELVTGKQP 322
++ E++ G+ P
Sbjct: 199 LMFEMMAGRSP 209
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 262 KISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQ 321
KI DFGLA I D + + GT +V PE D++S GVI L++G
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 322 P 322
P
Sbjct: 216 P 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 179 SQATGQGDREFAAEMETLGMVKHQNLVELLGYCSVDEEKLLVYEYMVKGSLDDWLRNQAA 238
S G + E+ L ++H N++ L + +L+ E + G L D+L + +
Sbjct: 51 SSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES 110
Query: 239 -----SLDWGKRC---------------KIVASNILLND----DFEAKISDFGLARLISD 274
+ ++ K+ + NI+L D KI DFGLA I D
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-D 169
Query: 275 CESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGVILLELVTGKQP 322
+ + GT +V PE D++S GVI L++G P
Sbjct: 170 FGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 252 NILLNDDFEAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDVYSFGV 311
N++++ +++DFGLA+ + + + GT Y+ PE + + D ++ GV
Sbjct: 171 NLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 312 ILLELVTGKQP 322
++ E+ G P
Sbjct: 227 LIYEMAAGYPP 237
>pdb|1KOH|A Chain A, The Crystal Structure And Mutational Analysis Of A Novel
Rna-Binding Domain Found In The Human Tap Nuclear Mrna
Export Factor
pdb|1KOH|B Chain B, The Crystal Structure And Mutational Analysis Of A Novel
Rna-Binding Domain Found In The Human Tap Nuclear Mrna
Export Factor
pdb|1KOH|C Chain C, The Crystal Structure And Mutational Analysis Of A Novel
Rna-Binding Domain Found In The Human Tap Nuclear Mrna
Export Factor
pdb|1KOH|D Chain D, The Crystal Structure And Mutational Analysis Of A Novel
Rna-Binding Domain Found In The Human Tap Nuclear Mrna
Export Factor
Length = 277
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 3 SLPNLLYLNLADNRLEGEVPRSGICQ---NLSIMSLTGNK 39
++P LL LNL++NRL S I Q NL I++L+GN+
Sbjct: 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE 207
>pdb|1KOO|A Chain A, The Crystal Structure And Mutational Analysis Of A Novel
Rna-Binding Domain Found In The Human Tap Nuclear Mrna
Export Factor
pdb|1KOO|B Chain B, The Crystal Structure And Mutational Analysis Of A Novel
Rna-Binding Domain Found In The Human Tap Nuclear Mrna
Export Factor
pdb|1KOO|C Chain C, The Crystal Structure And Mutational Analysis Of A Novel
Rna-Binding Domain Found In The Human Tap Nuclear Mrna
Export Factor
pdb|1KOO|D Chain D, The Crystal Structure And Mutational Analysis Of A Novel
Rna-Binding Domain Found In The Human Tap Nuclear Mrna
Export Factor
Length = 277
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 3 SLPNLLYLNLADNRLEGEVPRSGICQ---NLSIMSLTGNK 39
++P LL LNL++NRL S I Q NL I++L+GN+
Sbjct: 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE 207
>pdb|3RW6|A Chain A, Structure Of Nuclear Rna Export Factor Tap Bound To Cte
Rna
pdb|3RW6|B Chain B, Structure Of Nuclear Rna Export Factor Tap Bound To Cte
Rna
pdb|3RW7|A Chain A, Structure Of N-Terminal Domain Of Nuclear Rna Export
Factor Tap
pdb|3RW7|B Chain B, Structure Of N-Terminal Domain Of Nuclear Rna Export
Factor Tap
pdb|3RW7|C Chain C, Structure Of N-Terminal Domain Of Nuclear Rna Export
Factor Tap
pdb|3RW7|D Chain D, Structure Of N-Terminal Domain Of Nuclear Rna Export
Factor Tap
Length = 267
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 3 SLPNLLYLNLADNRLEGEVPRSGICQ---NLSIMSLTGNK 39
++P LL LNL++NRL S I Q NL I++L+GN+
Sbjct: 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE 207
>pdb|1FT8|A Chain A, Crystal Structure Of The Rna-Binding Domain Of The Mrna
Export Factor Tap
pdb|1FT8|B Chain B, Crystal Structure Of The Rna-Binding Domain Of The Mrna
Export Factor Tap
pdb|1FT8|C Chain C, Crystal Structure Of The Rna-Binding Domain Of The Mrna
Export Factor Tap
pdb|1FT8|D Chain D, Crystal Structure Of The Rna-Binding Domain Of The Mrna
Export Factor Tap
pdb|1FT8|E Chain E, Crystal Structure Of The Rna-Binding Domain Of The Mrna
Export Factor Tap
Length = 271
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 3 SLPNLLYLNLADNRLEGEVPRSGICQ---NLSIMSLTGNK 39
++P LL LNL++NRL S I Q NL I++L+GN+
Sbjct: 162 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE 201
>pdb|1FO1|A Chain A, Crystal Structure Of The Rna-Binding Domain Of The Mrna
Export Factor Tap
pdb|1FO1|B Chain B, Crystal Structure Of The Rna-Binding Domain Of The Mrna
Export Factor Tap
Length = 271
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 3 SLPNLLYLNLADNRLEGEVPRSGICQ---NLSIMSLTGNK 39
++P LL LNL++NRL S I Q NL I++L+GN+
Sbjct: 162 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE 201
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 251 SNILLNDDF----EAKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
SNIL D+ +I DFG A+ + E+ + T +V PE D+
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLR-AENGLLXTPCYTANFVAPEVLERQGYDAACDI 203
Query: 307 YSFGVILLELVTGKQP--TGPE 326
+S GV+L +TG P GP+
Sbjct: 204 WSLGVLLYTXLTGYTPFANGPD 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 251 SNILLNDDFE----AKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
SNIL D+ +I DFG A+ + E+ + T +V PE E D+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLR-AENGLLMTPCYTANFVAPEVLKRQGYDEGCDI 208
Query: 307 YSFGVILLELVTGKQP--TGP 325
+S G++L ++ G P GP
Sbjct: 209 WSLGILLYTMLAGYTPFANGP 229
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 251 SNILLNDDFE----AKISDFGLARLISDCESHVSTVVAGTIGYVPPEYGGTGKATERGDV 306
SNIL D+ +I DFG A+ + E+ + T +V PE E D+
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLR-AENGLLMTPCYTANFVAPEVLKRQGYDEGCDI 208
Query: 307 YSFGVILLELVTGKQP--TGP 325
+S G++L ++ G P GP
Sbjct: 209 WSLGILLYTMLAGYTPFANGP 229
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 37/185 (20%)
Query: 174 AVKKLSQATGQGDREFAAEMETLGMVK-HQNLVELLGYCSVDEEKLLVYEYMVKGSLDDW 232
AVK + + G E+E L + H+N++EL+ + ++ LV+E M GS+
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 233 LRNQ---------------AASLDWGKRCKIV-----ASNILL---NDDFEAKISDFGLA 269
+ + A++LD+ I NIL N KI DF L
Sbjct: 102 IHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG 161
Query: 270 ---RLISDCESHVST----VVAGTIGYVPPEY--GGTGKAT---ERGDVYSFGVILLELV 317
+L DC S +ST G+ Y+ PE + +A+ +R D++S GVIL L+
Sbjct: 162 SGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 318 TGKQP 322
+G P
Sbjct: 221 SGYPP 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 250 ASNILLNDDFEAKISDFGLARLIS 273
+N LLN D K+ DFGLAR I+
Sbjct: 157 PANCLLNQDCSVKVCDFGLARTIN 180
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,534,779
Number of Sequences: 62578
Number of extensions: 405261
Number of successful extensions: 2730
Number of sequences better than 100.0: 889
Number of HSP's better than 100.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 375
Number of HSP's that attempted gapping in prelim test: 1156
Number of HSP's gapped (non-prelim): 1145
length of query: 388
length of database: 14,973,337
effective HSP length: 101
effective length of query: 287
effective length of database: 8,652,959
effective search space: 2483399233
effective search space used: 2483399233
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)