Your job contains 1 sequence.
>035774
MANKLISEMRLPKSIANIFAARNITTAKDALSLTELELMKLLDVELSEVRSALALVSEIV
CPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCL
KLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILV
LQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQHPLSWHISLITS
LAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIVAVLGFHWAHAVT
IRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSGISLLTDDGTEMVVPETCNLSSR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035774
(357 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BE93 - symbol:RAD51B "Uncharacterized protein... 434 7.5e-41 1
UNIPROTKB|C9JYJ0 - symbol:RAD51B "DNA repair protein RAD5... 427 4.2e-40 1
UNIPROTKB|O15315 - symbol:RAD51B "DNA repair protein RAD5... 427 4.2e-40 1
MGI|MGI:1099436 - symbol:Rad51b "RAD51 homolog B" species... 418 3.7e-39 1
ZFIN|ZDB-GENE-040426-2750 - symbol:rad51b "RAD51 homolog ... 406 7.0e-38 1
UNIPROTKB|F1SA21 - symbol:RAD51B "Uncharacterized protein... 335 2.3e-30 1
RGD|1560681 - symbol:Rad51b "RAD51 homolog B (S. cerevisi... 327 1.6e-29 1
UNIPROTKB|E1BVI8 - symbol:RAD51B "Uncharacterized protein... 320 9.1e-29 1
UNIPROTKB|E2R3P3 - symbol:RAD51B "Uncharacterized protein... 311 8.2e-28 1
ZFIN|ZDB-GENE-041010-204 - symbol:rad51c "rad51 homolog C... 228 2.8e-17 1
MGI|MGI:2150020 - symbol:Rad51c "RAD51 homolog C" species... 227 4.2e-17 1
UNIPROTKB|Q8R2J9 - symbol:RAD51C "DNA repair protein RAD5... 226 5.6e-17 1
UNIPROTKB|F1M525 - symbol:Rad51c "Protein Rad51c" species... 219 2.6e-16 1
RGD|1563765 - symbol:Rad51c "Rad51 homolog c (S. cerevisi... 219 4.5e-16 1
UNIPROTKB|F1PMI7 - symbol:RAD51C "Uncharacterized protein... 218 6.2e-16 1
UNIPROTKB|O43502 - symbol:RAD51C "DNA repair protein RAD5... 218 6.9e-16 1
UNIPROTKB|O43542 - symbol:XRCC3 "DNA repair protein XRCC3... 216 7.9e-16 1
UNIPROTKB|Q06609 - symbol:RAD51 "DNA repair protein RAD51... 190 1.7e-15 2
UNIPROTKB|P70099 - symbol:RAD51 "DNA repair protein RAD51... 189 1.8e-15 2
UNIPROTKB|G1K2Z8 - symbol:RAD51 "Uncharacterized protein"... 189 2.1e-15 2
UNIPROTKB|P37383 - symbol:RAD51A "DNA repair protein RAD5... 189 2.2e-15 2
UNIPROTKB|B0M1M6 - symbol:pigRAD51 "Rad51" species:9823 "... 187 4.1e-15 2
UNIPROTKB|Q2KJ94 - symbol:RAD51 "DNA repair protein RAD51... 185 7.6e-15 2
UNIPROTKB|Q8MKI8 - symbol:RAD51 "DNA repair protein RAD51... 185 7.6e-15 2
UNIPROTKB|O77507 - symbol:RAD51 "DNA repair protein RAD51... 185 7.6e-15 2
MGI|MGI:97890 - symbol:Rad51 "RAD51 homolog" species:1009... 185 7.6e-15 2
UNIPROTKB|F1MW99 - symbol:RAD51C "Uncharacterized protein... 209 9.4e-15 1
UNIPROTKB|J3QKK3 - symbol:RAD51C "DNA repair protein RAD5... 206 1.4e-14 1
ZFIN|ZDB-GENE-040426-2286 - symbol:rad51 "RAD51 homolog (... 182 1.9e-14 2
POMBASE|SPAC20H4.07 - symbol:rad57 "RecA family ATPase Ra... 180 3.5e-14 2
ZFIN|ZDB-GENE-050320-116 - symbol:xrcc3 "X-ray repair com... 200 8.3e-14 1
UNIPROTKB|E2RAE7 - symbol:XRCC3 "Uncharacterized protein"... 199 1.1e-13 1
UNIPROTKB|F1S262 - symbol:RAD51C "Uncharacterized protein... 192 5.0e-13 1
TAIR|locus:2174577 - symbol:XRCC3 "homolog of X-ray repai... 189 8.6e-13 1
UNIPROTKB|E1BRQ1 - symbol:RAD51C "Uncharacterized protein... 145 9.5e-13 2
UNIPROTKB|F1NUE9 - symbol:RAD51C "Uncharacterized protein... 145 9.9e-13 2
FB|FBgn0003479 - symbol:spn-A "spindle A" species:7227 "D... 168 1.0e-12 2
FB|FBgn0003480 - symbol:spn-B "spindle B" species:7227 "D... 182 1.4e-12 2
TAIR|locus:2825233 - symbol:RAD51D "homolog of RAD51 D" s... 185 3.7e-12 1
UNIPROTKB|H7C2Q5 - symbol:RAD51C "DNA repair protein RAD5... 168 4.1e-12 1
UNIPROTKB|Q5ZM26 - symbol:XRCC3 "Uncharacterized protein"... 185 5.0e-12 1
ASPGD|ASPL0000057020 - symbol:uvsC species:162425 "Emeric... 165 5.9e-12 2
UNIPROTKB|F1S9W9 - symbol:XRCC3 "Uncharacterized protein"... 176 9.0e-12 2
UNIPROTKB|Q08DH8 - symbol:XRCC3 "DNA repair protein XRCC3... 182 1.1e-11 1
RGD|1306849 - symbol:Xrcc3 "X-ray repair complementing de... 181 1.5e-11 1
GENEDB_PFALCIPARUM|MAL8P1.76 - symbol:MAL8P1.76 "meiotic ... 158 1.6e-11 2
UNIPROTKB|Q8IB05 - symbol:MAL8P1.76 "Meiotic recombinatio... 158 1.6e-11 2
UNIPROTKB|B6JXU7 - symbol:SJAG_01410 "DNA repair protein ... 180 2.4e-11 1
MGI|MGI:1921585 - symbol:Xrcc3 "X-ray repair complementin... 176 5.8e-11 1
POMBASE|SPAC644.14c - symbol:rad51 "RecA family recombina... 176 6.6e-11 1
UNIPROTKB|A3E3X4 - symbol:rad51 "Rad51" species:4754 "Pne... 174 9.4e-11 1
UNIPROTKB|A3E3X6 - symbol:rad51 "Rad51" species:263815 "P... 174 9.4e-11 1
UNIPROTKB|Q2HJ51 - symbol:RAD51D "DNA repair protein RAD5... 168 1.2e-10 2
UNIPROTKB|G4MNW7 - symbol:MGG_06985 "Uncharacterized prot... 177 1.3e-10 1
UNIPROTKB|Q9C0P6 - symbol:dmc1 "Putative DMC1 protein" sp... 173 1.3e-10 1
DICTYBASE|DDB_G0283637 - symbol:xrcc3 "putative DNA repai... 158 1.4e-10 3
UNIPROTKB|Q6BP40 - symbol:DEHA2E16742g "DEHA2E16742p" spe... 172 1.4e-10 1
UNIPROTKB|Q9P972 - symbol:LIM15/DMC1 homolog "LIM15/DMC1 ... 172 1.6e-10 1
DICTYBASE|DDB_G0273611 - symbol:rad51-2 "putative DNA rep... 171 2.3e-10 1
DICTYBASE|DDB_G0273139 - symbol:rad51-1 "putative DNA rep... 171 2.3e-10 1
TAIR|locus:2147092 - symbol:RAD51 species:3702 "Arabidops... 169 3.5e-10 1
FB|FBgn0003482 - symbol:spn-D "spindle D" species:7227 "D... 165 4.0e-10 1
UNIPROTKB|E9PNT5 - symbol:RAD51 "DNA repair protein RAD51... 149 5.1e-10 1
SGD|S000000897 - symbol:RAD51 "Strand exchange protein" s... 169 5.3e-10 1
UNIPROTKB|F1N1D2 - symbol:DMC1 "Uncharacterized protein" ... 164 1.3e-09 1
DICTYBASE|DDB_G0284507 - symbol:DDB_G0284507 "putative Ra... 162 3.0e-09 1
ASPGD|ASPL0000051939 - symbol:AN10145 species:162425 "Eme... 164 3.7e-09 1
RGD|1563603 - symbol:Rad51 "RAD51 homolog (S. cerevisiae)... 152 6.9e-09 1
UNIPROTKB|O75771 - symbol:RAD51D "DNA repair protein RAD5... 155 8.1e-09 2
GENEDB_PFALCIPARUM|PF11_0087 - symbol:PF11_0087 "Rad51 ho... 157 9.2e-09 1
UNIPROTKB|Q8IIS8 - symbol:Rad51 "Rad51 homolog" species:3... 157 9.2e-09 1
CGD|CAL0001214 - symbol:RAD51 species:5476 "Candida albic... 157 1.0e-08 1
UNIPROTKB|Q59UY8 - symbol:RAD51 "Putative uncharacterized... 157 1.0e-08 1
SGD|S000000981 - symbol:DMC1 "Meiosis-specific protein re... 156 1.1e-08 1
MGI|MGI:105393 - symbol:Dmc1 "DMC1 dosage suppressor of m... 156 1.1e-08 1
UNIPROTKB|F1NI95 - symbol:DMC1 "Uncharacterized protein" ... 156 1.2e-08 1
UNIPROTKB|H7C1R0 - symbol:RAD51C "DNA repair protein RAD5... 152 1.2e-08 1
UNIPROTKB|G5EGG8 - symbol:rad-51 "RecA/Rad51/Dmc1-like pr... 156 1.3e-08 1
POMBASE|SPAC8E11.03c - symbol:dmc1 "RecA family ATPase Dm... 155 1.3e-08 1
ZFIN|ZDB-GENE-060331-93 - symbol:dmc1 "DMC1 dosage suppre... 155 1.5e-08 1
WB|WBGene00004297 - symbol:rad-51 species:6239 "Caenorhab... 156 1.6e-08 1
UNIPROTKB|Q95Q25 - symbol:rad-51 "Protein RAD-51, isoform... 156 1.6e-08 1
UNIPROTKB|E1BVK2 - symbol:RAD51D "Uncharacterized protein... 154 1.7e-08 1
UNIPROTKB|E2RK50 - symbol:DMC1 "Uncharacterized protein" ... 154 1.9e-08 1
UNIPROTKB|F1SKQ1 - symbol:DMC1 "Uncharacterized protein" ... 154 1.9e-08 1
UNIPROTKB|Q9DGC3 - symbol:Dmc1 "DMC1" species:8330 "Cynop... 154 1.9e-08 1
UNIPROTKB|E2RP02 - symbol:RAD51D "Uncharacterized protein... 151 2.0e-08 2
UNIPROTKB|Q14565 - symbol:DMC1 "Meiotic recombination pro... 153 2.4e-08 1
TAIR|locus:2084558 - symbol:DMC1 "DISRUPTION OF MEIOTIC C... 135 3.5e-08 2
UNIPROTKB|Q74ZU7 - symbol:AGR101C "AGR101Cp" species:2848... 151 4.0e-08 1
UNIPROTKB|Q4WAR2 - symbol:AFUA_7G02200 "Meiotic recombina... 150 5.3e-08 1
RGD|1307611 - symbol:Dmc1 "DMC1 dosage suppressor of mck1... 150 5.4e-08 1
RGD|1306944 - symbol:Rad51d "RAD51 homolog D (S. cerevisi... 142 1.2e-07 1
UNIPROTKB|I3LTG9 - symbol:RAD51D "Uncharacterized protein... 145 1.8e-07 1
UNIPROTKB|Q0MR21 - symbol:Q0MR21 "DMC1-like protein" spec... 145 2.0e-07 1
MGI|MGI:1261809 - symbol:Rad51d "RAD51 homolog D" species... 141 2.4e-07 2
UNIPROTKB|Q50LF6 - symbol:tilDmc1 "RecA homolog Dmc1" spe... 144 2.6e-07 1
UNIPROTKB|K7EN92 - symbol:RAD51D "DNA repair protein RAD5... 140 3.0e-07 1
UNIPROTKB|Q9GRA3 - symbol:CnDmc1 "DMC1 homologue CnDMC1" ... 141 5.4e-07 1
UNIPROTKB|G3V399 - symbol:XRCC3 "DNA repair protein XRCC3... 119 9.9e-07 1
WARNING: Descriptions of 14 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E1BE93 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 KO:K10869 OMA:CIMMSVL
GeneTree:ENSGT00550000074609 EMBL:DAAA02029475 EMBL:DAAA02029476
EMBL:DAAA02029477 EMBL:DAAA02029478 IPI:IPI00729339
RefSeq:NP_001180066.1 UniGene:Bt.25511 Ensembl:ENSBTAT00000025252
GeneID:617007 KEGG:bta:617007 NextBio:20900440 Uniprot:E1BE93
Length = 364
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 109/345 (31%), Positives = 171/345 (49%)
Query: 1 MANKLISEMRLPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSEVRSALALVSEIV 60
M +K + + L + + + I T +D + V L LVS
Sbjct: 15 MGSKKLRRVGLSQELCDRLNRHQIVTCQDFLCLSPLELMKMTGLSYQGVHELLCLVSRAC 74
Query: 61 CPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCL 120
P QTA + QR A H L T L LD AL GGV G +TE+ GP G GKTQFC+
Sbjct: 75 APQMQTAYEIKTQRCAA-HSSAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCI 133
Query: 121 KLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILV 180
+S+LA LP + GGL+G V+YID ES F++ R++E+ S FP F ++ + ++ +
Sbjct: 134 MMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFDTEEKLLLTSSKVHL 193
Query: 181 LQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQHP-----LSWHI 235
+ S E + +E ++ ++ VKL++IDS+ ++V + + G L+
Sbjct: 194 YRELSCDEVLQRIESLEEEIISKGVKLVIIDSVASVVRKEFDTQLQGNVRERNKFLAREA 253
Query: 236 SLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRI-LKDRTRYYSHIVAVLGFH 294
+ + LAE IP+++TNQ+ V D + L + T S + A LG
Sbjct: 254 ASLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPADDLSLSEGTSGSSCLTAALGNT 313
Query: 295 WAHAVTIRLVLE-AKSGQRFMNVEKSPTSPPLAFSFTINPSGISL 338
W+H+V RL+L+ S +R + + KSP +P AF +TI G+ L
Sbjct: 314 WSHSVNTRLILQYLGSERRQILIAKSPLAPFTAFVYTIEKEGLVL 358
>UNIPROTKB|C9JYJ0 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
HGNC:HGNC:9822 ChiTaRS:RAD51B HOGENOM:HOG000154062 EMBL:AL121595
EMBL:AL121820 EMBL:AL122013 EMBL:AL132986 EMBL:AL133313
EMBL:AL133370 EMBL:AL136294 EMBL:AL157915 EMBL:AL589168
IPI:IPI00945688 ProteinModelPortal:C9JYJ0 SMR:C9JYJ0 STRING:C9JYJ0
Ensembl:ENST00000487861 ArrayExpress:C9JYJ0 Bgee:C9JYJ0
Uniprot:C9JYJ0
Length = 425
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 104/345 (30%), Positives = 175/345 (50%)
Query: 1 MANKLISEMRLPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSEVRSALALVSEIV 60
M +K + + L + + + + I T +D + V L +VS
Sbjct: 1 MGSKKLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMVSRAC 60
Query: 61 CPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCL 120
P QTA + QR+A + L T L LD AL GGV G +TE+ GP G GKTQFC+
Sbjct: 61 APKMQTAYGIKAQRSA-DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCI 119
Query: 121 KLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILV 180
+S+LA LP + GGL+G V+YID ES F++ R++E+ S FP F+++ + ++ +
Sbjct: 120 MMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHL 179
Query: 181 LQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQHP-----LSWHI 235
+ + E + +E ++ ++ +KL+++DS+ ++V + + G L+
Sbjct: 180 YRELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREA 239
Query: 236 SLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRI-LKDRTRYYSHIVAVLGFH 294
S + LAE IP+++TNQ+ V D + L + T S ++A LG
Sbjct: 240 SSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPADDLSLSEGTSGSSCVIAALGNT 299
Query: 295 WAHAVTIRLVLE-AKSGQRFMNVEKSPTSPPLAFSFTINPSGISL 338
W+H+V RL+L+ S +R + + KSP +P +F +TI G+ L
Sbjct: 300 WSHSVNTRLILQYLDSERRQILIAKSPLAPFTSFVYTIKEEGLVL 344
>UNIPROTKB|O15315 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=TAS] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0007131 "reciprocal meiotic
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_604
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
GO:GO:0005524 GO:GO:0005654 EMBL:CH471061 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007131 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 MIM:150699 EMBL:U92074 EMBL:U84138 EMBL:Y15571
EMBL:BX161515 EMBL:BX248061 EMBL:BX248766 EMBL:DQ160197
EMBL:AC004518 EMBL:CR536560 EMBL:BC030219 EMBL:AY138857
EMBL:AY138858 EMBL:AY138859 IPI:IPI00006105 IPI:IPI00220523
IPI:IPI00386489 IPI:IPI00386490 IPI:IPI00395987 RefSeq:NP_002868.1
RefSeq:NP_598193.2 RefSeq:NP_598194.1 UniGene:Hs.172587
ProteinModelPortal:O15315 SMR:O15315 IntAct:O15315 MINT:MINT-224850
STRING:O15315 PhosphoSite:O15315 PRIDE:O15315 DNASU:5890
Ensembl:ENST00000390683 Ensembl:ENST00000471583
Ensembl:ENST00000487270 Ensembl:ENST00000488612 GeneID:5890
KEGG:hsa:5890 UCSC:uc001xkd.3 UCSC:uc001xke.3 UCSC:uc001xkf.2
UCSC:uc001xkg.2 UCSC:uc010aqr.3 CTD:5890 GeneCards:GC14P068287
H-InvDB:HIX0022466 HGNC:HGNC:9822 HPA:CAB016191 MIM:602948
neXtProt:NX_O15315 PharmGKB:PA34178 HOVERGEN:HBG061476
InParanoid:O15315 KO:K10869 OMA:CIMMSVL PhylomeDB:O15315
ChiTaRS:RAD51B GenomeRNAi:5890 NextBio:22908 ArrayExpress:O15315
Bgee:O15315 Genevestigator:O15315 Uniprot:O15315
Length = 384
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 104/345 (30%), Positives = 175/345 (50%)
Query: 1 MANKLISEMRLPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSEVRSALALVSEIV 60
M +K + + L + + + + I T +D + V L +VS
Sbjct: 1 MGSKKLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMVSRAC 60
Query: 61 CPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCL 120
P QTA + QR+A + L T L LD AL GGV G +TE+ GP G GKTQFC+
Sbjct: 61 APKMQTAYGIKAQRSA-DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCI 119
Query: 121 KLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILV 180
+S+LA LP + GGL+G V+YID ES F++ R++E+ S FP F+++ + ++ +
Sbjct: 120 MMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHL 179
Query: 181 LQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQHP-----LSWHI 235
+ + E + +E ++ ++ +KL+++DS+ ++V + + G L+
Sbjct: 180 YRELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREA 239
Query: 236 SLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRI-LKDRTRYYSHIVAVLGFH 294
S + LAE IP+++TNQ+ V D + L + T S ++A LG
Sbjct: 240 SSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPADDLSLSEGTSGSSCVIAALGNT 299
Query: 295 WAHAVTIRLVLE-AKSGQRFMNVEKSPTSPPLAFSFTINPSGISL 338
W+H+V RL+L+ S +R + + KSP +P +F +TI G+ L
Sbjct: 300 WSHSVNTRLILQYLDSERRQILIAKSPLAPFTSFVYTIKEEGLVL 344
>MGI|MGI:1099436 [details] [associations]
symbol:Rad51b "RAD51 homolog B" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1099436 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869 OMA:CIMMSVL
EMBL:U92068 EMBL:AK015771 EMBL:AK032913 IPI:IPI00331068
IPI:IPI00399712 RefSeq:NP_001239491.1 RefSeq:NP_033040.2
UniGene:Mm.341756 ProteinModelPortal:O35719 SMR:O35719
MINT:MINT-205633 STRING:O35719 PhosphoSite:O35719 PRIDE:O35719
Ensembl:ENSMUST00000079533 GeneID:19363 KEGG:mmu:19363
UCSC:uc007oai.1 UCSC:uc007oaj.1 GeneTree:ENSGT00550000074609
HOGENOM:HOG000154062 InParanoid:O35719 OrthoDB:EOG4G4GQP
NextBio:296429 Bgee:O35719 CleanEx:MM_RAD51L1 Genevestigator:O35719
Uniprot:O35719
Length = 350
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 110/302 (36%), Positives = 164/302 (54%)
Query: 49 VRSALALVSEIVCPPFQTALLLMEQRAATEHLG-GHLPTRLKGLDAALCGGVPFGVVTEL 107
V L VS+ P QTA L +R+A HL L T L LD AL GGVP G +TE+
Sbjct: 49 VHELLHTVSKACAPQMQTAYELKTRRSA--HLSPAFLSTTLCALDEALHGGVPCGSLTEI 106
Query: 108 VGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHS 167
GP G GKTQFC+ +S+LA LP GGL+G V+YID ES FT+ R++E+ S FP+ F++
Sbjct: 107 TGPPGCGKTQFCIMMSVLATLPTSLGGLEGAVVYIDTESAFTAERLVEIAESRFPQYFNT 166
Query: 168 KGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPG 227
+ + R+ + + + + LE ++ ++ VKL+++DS+ ++V + + G
Sbjct: 167 EEKLLLTSSRVHLCRELTCEGLLQRLESLEEEIISKGVKLVIVDSIASVVRKEFDPKLQG 226
Query: 228 QHP-----LSWHISLITSLA-EFSRIPIVVTNQVRPQSHDESCLYPFQVQKM----DRIL 277
L SL+ LA EFS IP+++TNQ+ +H L P Q + D L
Sbjct: 227 NIKERNKFLGKGASLLKYLAGEFS-IPVILTNQIT--THLSGAL-PSQADLVSPADDLSL 282
Query: 278 KDRTRYYSHIVAVLGFHWAHAVTIRLVLE-AKSGQRFMNVEKSPTSPPLAFSFTINPSGI 336
+ T S +VA LG W H V RL+L+ S +R + + KSP + +F +TI G+
Sbjct: 283 SEGTSGSSCLVAALGNTWGHCVNTRLILQYLDSERRQILIAKSPLAAFTSFVYTIKGEGL 342
Query: 337 SL 338
L
Sbjct: 343 VL 344
>ZFIN|ZDB-GENE-040426-2750 [details] [associations]
symbol:rad51b "RAD51 homolog B (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 ZFIN:ZDB-GENE-040426-2750
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869
HOGENOM:HOG000154062 HSSP:O74036 EMBL:BC052122 IPI:IPI00506696
RefSeq:NP_998577.1 UniGene:Dr.123796 ProteinModelPortal:Q7ZTX4
PRIDE:Q7ZTX4 GeneID:406721 KEGG:dre:406721 InParanoid:Q7ZTX4
NextBio:20818241 ArrayExpress:Q7ZTX4 Bgee:Q7ZTX4 Uniprot:Q7ZTX4
Length = 373
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 102/290 (35%), Positives = 162/290 (55%)
Query: 55 LVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTG 114
LVS+ P TAL L +++ E L T L LD L GG+P G +TE+ GP+G G
Sbjct: 55 LVSKACAPAVITALDLWKRK---EELC--FSTSLPALDRLLHGGLPRGALTEVTGPSGCG 109
Query: 115 KTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEM 174
KTQ C+ LS+LA LP GGLD GVIYID ES F++ R++EM S FPE F K EM
Sbjct: 110 KTQLCMMLSVLATLPKSLGGLDSGVIYIDTESAFSAERLVEMAQSRFPEFFSVKERLLEM 169
Query: 175 AGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQ--HP-- 230
A R+ + + + + + LE+++ ++ + L+++DS+ ++V + PG H
Sbjct: 170 AARVHLFRELTCQDVLKRLERLEEDIIACRAGLVILDSVASVVRKEFDTSLPGNLTHRSN 229
Query: 231 -LSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIVA 289
L +++ L++ IP+V+TNQ+ +H L+ Q + D ++ + + + A
Sbjct: 230 FLGQEAAVLKYLSQEFCIPVVLTNQIT--THVGEKLHCPQWNQTDASFEEDSGF---VTA 284
Query: 290 VLGFHWAHAVTIRLVLEAK-SGQRFMNVEKSPTSPPLAFSFTINPSGISL 338
LG W+H+V RL+++ + S +R + + KSP +P S+TI GI L
Sbjct: 285 ALGNTWSHSVNTRLIVQYEDSERRQIVIAKSPVAPFAVLSYTIQKEGIRL 334
>UNIPROTKB|F1SA21 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:CT797462
Ensembl:ENSSSCT00000002560 Uniprot:F1SA21
Length = 252
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 74/217 (34%), Positives = 113/217 (52%)
Query: 1 MANKLISEMRLPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSEVRSALALVSEIV 60
M +K + + L + + + +I T +D + V L LVS
Sbjct: 1 MGSKKLRRVGLSQELCDRLNRHHIITCQDFLCLSPLELMKMTGLSYQGVHDLLCLVSRAC 60
Query: 61 CPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCL 120
PP QTA + QR+A L T L LD AL GGV G +TE+ GP G GKTQFC+
Sbjct: 61 APPMQTAYEIKTQRSAVPS-PAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCI 119
Query: 121 KLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILV 180
+S+LA LP GGL+G V+YID ES F++ R++EM S FP F ++ ++ +
Sbjct: 120 MMSILATLPIDMGGLEGAVVYIDTESAFSAERLVEMAESRFPRYFSTEEKLLLTVSKVHL 179
Query: 181 LQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV 217
+ S E + +E ++ ++ VKL++IDS+ ++V
Sbjct: 180 YRELSCDEVLQRIESLEEEIISKGVKLVIIDSVASVV 216
>RGD|1560681 [details] [associations]
symbol:Rad51b "RAD51 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1560681
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
OrthoDB:EOG4G4GQP IPI:IPI00367665 Ensembl:ENSRNOT00000016459
UCSC:RGD:1560681 Uniprot:D4A4Y7
Length = 258
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 74/218 (33%), Positives = 115/218 (52%)
Query: 1 MANKLISEMRLPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSEVRSALALVSEIV 60
M++K + L + + + I +D + V L VS+
Sbjct: 1 MSSKKLRRAGLSQELCDRLCRYQIVNCQDFLNLSPLELMKVTGLSYRGVHELLHTVSKAC 60
Query: 61 CPPFQTALLLMEQRAATEHLG-GHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFC 119
P QTA L +R+A HL L T L LD AL GGVP G +TE+ GP G GKTQFC
Sbjct: 61 APQMQTAYELKTRRSA--HLSPAFLSTTLGALDEALHGGVPCGSLTEVTGPPGCGKTQFC 118
Query: 120 LKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRIL 179
+ +S+LA LP GGL+G V+YID ES FT+ R++E+ S FP+ F+++ + R+
Sbjct: 119 IMMSVLATLPTRLGGLEGAVLYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVH 178
Query: 180 VLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV 217
+ Q + + LE ++ ++ VKL+++DS+ ++V
Sbjct: 179 LCQELTCEGLLQRLESLEEEIISKGVKLVIVDSIASVV 216
>UNIPROTKB|E1BVI8 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 OMA:CIMMSVL GeneTree:ENSGT00550000074609
EMBL:AADN02003180 IPI:IPI00812156 Ensembl:ENSGALT00000015453
Uniprot:E1BVI8
Length = 275
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 81/254 (31%), Positives = 124/254 (48%)
Query: 1 MANKLISEMRLPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSEVRSALALVSEIV 60
MA K + +L + + + ITT +D V+ L VS
Sbjct: 1 MATKKLRRAKLSQELCERLSRYQITTCQDFLCLSLLELMKVTGESYRNVQKLLRKVSLAC 60
Query: 61 CPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCL 120
P QTA M+ R + LPT L LD L GG+P G +TEL P G GKTQFC+
Sbjct: 61 APKMQTAYE-MKVRRSINPSAAFLPTSLHSLDKVLHGGIPCGSLTELTSPPGCGKTQFCI 119
Query: 121 KLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILV 180
+S+LA LP GGLDG VIYID ES F++ R+IE+ + FP F S M I +
Sbjct: 120 TMSVLATLPVSMGGLDGAVIYIDTESAFSAERLIEIAGNRFPTYFDSDEKLFCMTRSIHL 179
Query: 181 LQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQ-----HPLSWHI 235
+ + + ++ ++ ++ ++KL++IDS+ ++V + + G + L+
Sbjct: 180 YRELTCDSVLKRIKSLEEEIISKKIKLIIIDSVASVVRKEFDTKLQGNLAERSNFLARGA 239
Query: 236 SLITSLAEFSRIPI 249
SL+ +AE IP+
Sbjct: 240 SLLKYVAEEFSIPV 253
>UNIPROTKB|E2R3P3 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:AAEX03005799
Ensembl:ENSCAFT00000026122 Uniprot:E2R3P3
Length = 272
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 68/217 (31%), Positives = 115/217 (52%)
Query: 1 MANKLISEMRLPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSEVRSALALVSEIV 60
M+++ + + L + + + I T +D + V L +VS
Sbjct: 1 MSSRKLRRVGLSQELCDRLNRYQIVTCQDFLCLSPLELMKMTGLSYKGVHELLCMVSRAC 60
Query: 61 CPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCL 120
P QTA + + +A+ L L T L LD AL GGV G +TE+ GP G GKTQFC+
Sbjct: 61 APKMQTAYRIKMETSASL-LPAFLATTLSALDEALHGGVACGSLTEITGPPGCGKTQFCI 119
Query: 121 KLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILV 180
+S+LA LP + GGL+G V+YID ES F++ R++E+ S FP F+++ + ++ +
Sbjct: 120 MMSILATLPTNMGGLEGDVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHL 179
Query: 181 LQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV 217
+ S + +E ++ ++ VKL++IDS+ ++V
Sbjct: 180 YRELSCDAVLQRIESLEEEIISKGVKLVIIDSVASVV 216
>ZFIN|ZDB-GENE-041010-204 [details] [associations]
symbol:rad51c "rad51 homolog C (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 ZFIN:ZDB-GENE-041010-204 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5889 HOVERGEN:HBG055764 KO:K10870
OrthoDB:EOG4CRM09 EMBL:BC083214 IPI:IPI00498753
RefSeq:NP_001006101.1 UniGene:Dr.83418 ProteinModelPortal:Q5XJT2
STRING:Q5XJT2 GeneID:450081 KEGG:dre:450081 InParanoid:Q5XJT2
NextBio:20833059 ArrayExpress:Q5XJT2 Uniprot:Q5XJT2
Length = 362
Score = 228 (85.3 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 84/285 (29%), Positives = 131/285 (45%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+ Q E G + T GLD A+ GGVP G TE+ G G GKTQ C++L++
Sbjct: 72 TALDLLHQ----EQTLGSIVTFCSGLDDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAVD 127
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASS------FPEIFHSKGMAQEM-AGRI 178
+P +GGL G +YID E +F +R+ +M ++ E KG +E+ +I
Sbjct: 128 VQIPVFFGGLGGKALYIDTEGSFLVQRVADMAEAAVQHCTLLAEDTEQKGALEELNVEKI 187
Query: 179 LV-LQPTSLSEFTESLEKIKV--SLLQN--QVKLLVIDSMEALVPGVHEQRAPGQHP--L 231
L L ++ + L ++ + L +V+L+VIDS+ P H+ Q L
Sbjct: 188 LSNLFLVRCHDYVKLLAEVYLLPDFLSEHPEVRLVVIDSIA--FPFRHDFEDLSQRTRLL 245
Query: 232 SWHISLITSLAEFSRIPIVVTNQVRPQ-SHDESCLYPFQVQKMDRILKDRTRYYSHIVAV 290
+ + LA R+ +V+TNQ+ + S+ +S L P
Sbjct: 246 NGLAQQLIQLATQHRVAVVLTNQMTTRVSNGQSKLVP----------------------A 283
Query: 291 LGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSG 335
LG W HA T RL+L + +R ++ KSP+ + I G
Sbjct: 284 LGESWGHAATQRLILHWEGQRRLASLYKSPSQMEATVQYQITVQG 328
>MGI|MGI:2150020 [details] [associations]
symbol:Rad51c "RAD51 homolog C" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048476 "Holliday junction resolvase complex" evidence=IC]
InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:2150020 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007283 EMBL:CH466556 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 GO:GO:0048476
EMBL:AL596130 GeneTree:ENSGT00550000074609 HSSP:O74036 CTD:5889
HOVERGEN:HBG055764 KO:K10870 OMA:QRDLVSF OrthoDB:EOG4CRM09
EMBL:AF324883 EMBL:AK076551 EMBL:CU406989 EMBL:CU406969
EMBL:AL669902 EMBL:BC090648 EMBL:BC141034 IPI:IPI00125672
IPI:IPI00226086 RefSeq:NP_444499.1 UniGene:Mm.37376
ProteinModelPortal:Q924H5 SMR:Q924H5 STRING:Q924H5 PRIDE:Q924H5
Ensembl:ENSMUST00000007790 Ensembl:ENSMUST00000067692 GeneID:114714
KEGG:mmu:114714 UCSC:uc007ktp.2 InParanoid:Q5SX32 NextBio:368733
Bgee:Q924H5 Genevestigator:Q924H5 Uniprot:Q924H5
Length = 366
Score = 227 (85.0 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 83/287 (28%), Positives = 130/287 (45%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH G + T LD L GG+P TE+ G G GKTQ C++L++
Sbjct: 77 TALELLEQ----EHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVD 132
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMG----------ASSFPEIFHSKGMAQEMA 175
+P +GG+ G ++ID E +F R++ + A + E H K +
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTL 192
Query: 176 GRILV-LQPTSLSEFTESLEKIKV--SLLQN--QVKLLVIDSMEALVPGVH--EQRAPGQ 228
IL + ++TE L ++ + L + +V+L++ID + P H E +
Sbjct: 193 ENILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIA--FPFRHDLEDLSLRT 250
Query: 229 HPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIV 288
L+ + SLA R+ +++TNQ+ K+D K++ +V
Sbjct: 251 RLLNGLAQQMISLANNHRLAVILTNQM--------------TTKID---KNQAL----LV 289
Query: 289 AVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSG 335
LG W HA TIRL+ + QRF + KSP+ F I P G
Sbjct: 290 PALGESWGHAATIRLIFHWEQKQRFATLYKSPSQKESTIPFQITPQG 336
>UNIPROTKB|Q8R2J9 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:10029 "Cricetulus griseus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0006310 GO:GO:0008094 GO:GO:0007062 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AJ413202
EMBL:AJ428572 RefSeq:NP_001231005.1 HSSP:O74036
ProteinModelPortal:Q8R2J9 GeneID:100689078 CTD:5889
HOVERGEN:HBG055764 Uniprot:Q8R2J9
Length = 366
Score = 226 (84.6 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 84/287 (29%), Positives = 132/287 (45%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH G + T LD L GG+P TE+ G G GKTQ C++L++
Sbjct: 77 TALELLEQ----EHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVD 132
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMG----------ASSFPEIFHSKGMAQEMA 175
+P +GG+ G ++ID E +F R++ + A + + H K +
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEEHQKALEGFTL 192
Query: 176 GRILV-LQPTSLSEFTESLEKIKV--SLLQN--QVKLLVIDSMEALVPGVHE--QRAPGQ 228
IL + ++TE L ++ + L N +V+L++ID + AL P H+ +
Sbjct: 193 ENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGI-AL-PFRHDLDDLSLRT 250
Query: 229 HPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIV 288
L+ + SLA R+ +++TNQ+ K+D K++ +V
Sbjct: 251 RLLNGLAQQMISLANNHRLAVILTNQM--------------TTKID---KNQAL----LV 289
Query: 289 AVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSG 335
LG W HA TIRL+ + QRF + KSP+ F I P G
Sbjct: 290 PALGESWGHAATIRLIFHWEQKQRFATLYKSPSQKESTIPFQITPQG 336
>UNIPROTKB|F1M525 [details] [associations]
symbol:Rad51c "Protein Rad51c" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 IPI:IPI00951574 Ensembl:ENSRNOT00000065976
ArrayExpress:F1M525 Uniprot:F1M525
Length = 336
Score = 219 (82.2 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 82/288 (28%), Positives = 132/288 (45%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH G + T LD L GG+P TE+ G G GKTQ C++L++
Sbjct: 47 TALELLEQ----EHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVD 102
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGM----AQEMAGRILVL 181
+P +GG+ G ++ID E +F R++ + + + G Q+ A + L
Sbjct: 103 VQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTL 162
Query: 182 QPTSLS--------EFTESLEKIKV--SLLQN--QVKLLVIDSMEALVPGVHE--QRAPG 227
+ LS ++TE L ++ + L + +V+L++ID + P H+
Sbjct: 163 E-NILSHIYYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIA--FPFRHDLDDLFLR 219
Query: 228 QHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHI 287
L+ + SLA R+ +++TNQ+ K+D K++ + +
Sbjct: 220 TRLLNGLAQQLISLANKHRLAVILTNQM--------------TTKID---KNQ----ASL 258
Query: 288 VAVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSG 335
V LG W HA TIRL+ + QRF + KSP+ F I P G
Sbjct: 259 VPALGESWGHAATIRLIFHWEQKQRFATLYKSPSQKESTVPFQITPQG 306
>RGD|1563765 [details] [associations]
symbol:Rad51c "Rad51 homolog c (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA;ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IEA;ISO] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA;ISO] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007283 "spermatogenesis" evidence=IEA;ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity"
evidence=IEA;ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 CTD:5889 KO:K10870
OMA:QRDLVSF RefSeq:NP_001123249.1 UniGene:Rn.160309
Ensembl:ENSRNOT00000008846 GeneID:497976 KEGG:rno:497976
NextBio:698267 Uniprot:G3V6U0
Length = 366
Score = 219 (82.2 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 82/288 (28%), Positives = 132/288 (45%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH G + T LD L GG+P TE+ G G GKTQ C++L++
Sbjct: 77 TALELLEQ----EHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVD 132
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGM----AQEMAGRILVL 181
+P +GG+ G ++ID E +F R++ + + + G Q+ A + L
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTL 192
Query: 182 QPTSLS--------EFTESLEKIKV--SLLQN--QVKLLVIDSMEALVPGVHE--QRAPG 227
+ LS ++TE L ++ + L + +V+L++ID + P H+
Sbjct: 193 E-NILSHIYYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIA--FPFRHDLDDLFLR 249
Query: 228 QHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHI 287
L+ + SLA R+ +++TNQ+ K+D K++ + +
Sbjct: 250 TRLLNGLAQQLISLANKHRLAVILTNQM--------------TTKID---KNQ----ASL 288
Query: 288 VAVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSG 335
V LG W HA TIRL+ + QRF + KSP+ F I P G
Sbjct: 289 VPALGESWGHAATIRLIFHWEQKQRFATLYKSPSQKESTVPFQITPQG 336
>UNIPROTKB|F1PMI7 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008821 "crossover junction endodeoxyribonuclease
activity" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:AAEX03006577
EMBL:AAEX03006578 EMBL:AAEX03006579 Ensembl:ENSCAFT00000027833
Uniprot:F1PMI7
Length = 368
Score = 218 (81.8 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 78/287 (27%), Positives = 128/287 (44%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH + T LD L GG+P TE+ G G GKTQ C++L++
Sbjct: 79 TALELLEQ----EHTQSFIITFCSALDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVD 134
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIF----------HSKGMAQEMA 175
+P +GG++G ++ID E +F R++++ + + HSK +
Sbjct: 135 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLHLIAGRHMGEEHSKALEDFTL 194
Query: 176 GRILV-LQPTSLSEFTESLEKIKV--SLLQ--NQVKLLVIDSMEALVPGVHE--QRAPGQ 228
IL + ++TE L ++ + L ++V+L+++D + P H+ +
Sbjct: 195 ENILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIA--FPFRHDLDDLSLRT 252
Query: 229 HPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIV 288
L+ + SLA R+ +++TNQ+ K+DR + +V
Sbjct: 253 RLLNGLAQQMISLANNHRLAVLLTNQM--------------TTKIDR-------NQALLV 291
Query: 289 AVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSG 335
LG W HA TIRL+ QR + KSP+ F I P G
Sbjct: 292 PALGESWGHAATIRLIFHWDQKQRLATLYKSPSQKESTVLFQITPQG 338
>UNIPROTKB|O43502 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IDA] [GO:0006310
"DNA recombination" evidence=IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596 "blood
coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 GO:GO:0048471 GO:GO:0005654 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007283 GO:GO:0006310
EMBL:CH471109 GO:GO:0007131 Orphanet:145 Orphanet:84 GO:GO:0007141
GO:GO:0008821 GO:GO:0008094 GO:GO:0007062 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 EMBL:AC025521 CTD:5889
HOVERGEN:HBG055764 KO:K10870 EMBL:AF029669 EMBL:AF029670
EMBL:AY623112 EMBL:AC011195 EMBL:BC107753 IPI:IPI00012829
IPI:IPI00040453 RefSeq:NP_002867.1 RefSeq:NP_478123.1
UniGene:Hs.412587 ProteinModelPortal:O43502 SMR:O43502
IntAct:O43502 MINT:MINT-204767 STRING:O43502 PhosphoSite:O43502
PRIDE:O43502 DNASU:5889 Ensembl:ENST00000337432
Ensembl:ENST00000421782 GeneID:5889 KEGG:hsa:5889 UCSC:uc002iwu.3
GeneCards:GC17P056769 HGNC:HGNC:9820 MIM:602774 MIM:613390
MIM:613399 neXtProt:NX_O43502 PharmGKB:PA34177 InParanoid:O43502
OMA:QRDLVSF OrthoDB:EOG4CRM09 PhylomeDB:O43502 GenomeRNAi:5889
NextBio:22902 ArrayExpress:O43502 Bgee:O43502 CleanEx:HS_RAD51C
Genevestigator:O43502 GermOnline:ENSG00000108384 Uniprot:O43502
Length = 376
Score = 218 (81.8 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 83/308 (26%), Positives = 134/308 (43%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH G + T LD L GGVP TE+ G G GKTQ C++L++
Sbjct: 86 TALELLEQ----EHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 141
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIF----------HSKGMAQEMA 175
+P +GG+ G ++ID E +F R++++ + + H K +
Sbjct: 142 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTL 201
Query: 176 GRILV-LQPTSLSEFTESLEKIKV--SLLQ--NQVKLLVIDSMEALVPGVHE--QRAPGQ 228
IL + ++TE L ++ + L ++V+L+++D + P H+ +
Sbjct: 202 DNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIA--FPFRHDLDDLSLRT 259
Query: 229 HPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIV 288
L+ + SLA R+ +++TNQ+ K+DR + +V
Sbjct: 260 RLLNGLAQQMISLANNHRLAVILTNQM--------------TTKIDR-------NQALLV 298
Query: 289 AVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSGISLLTDDGTEMVV 348
LG W HA TIRL+ QR + KSP+ F I P G + VV
Sbjct: 299 PALGESWGHAATIRLIFHWDRKQRLATLYKSPSQKECTVLFQIKPQGFR-------DTVV 351
Query: 349 PETCNLSS 356
C+L +
Sbjct: 352 TSACSLQT 359
>UNIPROTKB|O43542 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0010033 "response to organic substance" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006281 "DNA repair"
evidence=IGI] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 MIM:114480 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOGENOM:HOG000239162 KO:K10880 CTD:7517
HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS EMBL:AF035586
EMBL:AF037222 EMBL:AF508041 EMBL:BC001036 EMBL:BC002949
EMBL:BC011725 IPI:IPI00023073 RefSeq:NP_001093588.1
RefSeq:NP_001093589.1 RefSeq:NP_005423.1 UniGene:Hs.592325
UniGene:Hs.733412 ProteinModelPortal:O43542 SMR:O43542
IntAct:O43542 STRING:O43542 PhosphoSite:O43542 PaxDb:O43542
PRIDE:O43542 DNASU:7517 Ensembl:ENST00000352127
Ensembl:ENST00000445556 Ensembl:ENST00000553264
Ensembl:ENST00000554913 Ensembl:ENST00000555055 GeneID:7517
KEGG:hsa:7517 UCSC:uc001ynx.4 GeneCards:GC14M104163 HGNC:HGNC:12830
MIM:600675 MIM:613972 neXtProt:NX_O43542 PharmGKB:PA37422
InParanoid:O43542 PhylomeDB:O43542 GenomeRNAi:7517 NextBio:29415
ArrayExpress:O43542 Bgee:O43542 CleanEx:HS_XRCC3
Genevestigator:O43542 GermOnline:ENSG00000126215 Uniprot:O43542
Length = 346
Score = 216 (81.1 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 84/291 (28%), Positives = 133/291 (45%)
Query: 66 TALLLMEQ--RAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLS 123
TAL L +Q R T+H L LDA L GG+P +TEL G + GKTQ L+L
Sbjct: 64 TALQLHQQKERFPTQHQ--RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLC 121
Query: 124 LLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHS-KG-MAQEM--AGRIL 179
L P +GGL+ G +YI E F +R+ ++ A P + G + Q++ +I
Sbjct: 122 LAVQFPRQHGGLEAGAVYICTEDAFPHKRLQQLMAQQ-PRLRTDVPGELLQKLRFGSQIF 180
Query: 180 VLQPTSLSEFTESL-EKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQHPLSWHI-SL 237
+ + E + +K+ V L + +L+VIDS+ A P E + P + H+ SL
Sbjct: 181 IEHVADVDTLLECVNKKVPVLLSRGMARLVVIDSVAA--PFRCEFDSQASAPRARHLQSL 238
Query: 238 ITSLAEFS---RIPIVVTNQVRPQSHDESCLY-PFQVQKMDRILKDRTRYYSHIVAVLGF 293
+L E S + P++ NQV ++ + P + + LG
Sbjct: 239 GATLRELSSAFQSPVLCINQVTEAMEEQGAAHGPLGF------------WDERVSPALGI 286
Query: 294 HWAHAVTIRLVL------EAKSG--QRFMNVEKSPTSPPLAFSFTINPSGI 336
WA+ + +RL+ EA G R + V +P PP + S+TI+ G+
Sbjct: 287 TWANQLLVRLLADRLREEEAALGCPARTLRVLSAPHLPPSSCSYTISAEGV 337
>UNIPROTKB|Q06609 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006268 "DNA unwinding involved in replication" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0016605 "PML body" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=TAS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005524 "ATP
binding" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] [GO:0042802 "identical protein binding" evidence=IPI]
Reactome:REACT_216 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_111183 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 MIM:114480 GO:GO:0006312
Pathway_Interaction_DB:bard1pathway GO:GO:0007131 Orphanet:145
SUPFAM:SSF47794 GO:GO:0000800 PDB:1N0W PDBsum:1N0W EMBL:AC022405
EMBL:CH471125 EMBL:AC012476 Orphanet:238722 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 GO:GO:0000730 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13804 EMBL:D14134 EMBL:AF165094
EMBL:AF165088 EMBL:AF165089 EMBL:AF165090 EMBL:AF165091
EMBL:AF165092 EMBL:AF165093 EMBL:AF233744 EMBL:AF233740
EMBL:AF233741 EMBL:AF233742 EMBL:AF236021 EMBL:AF233743
EMBL:EU362635 EMBL:AY196785 EMBL:AK131299 EMBL:AK291969
EMBL:AK313503 EMBL:CR536559 EMBL:BC001459 IPI:IPI00032201
IPI:IPI00220649 IPI:IPI00553199 IPI:IPI01010370 PIR:I58295
RefSeq:NP_001157741.1 RefSeq:NP_001157742.1 RefSeq:NP_002866.2
RefSeq:NP_597994.3 UniGene:Hs.631709 PDB:1B22 PDBsum:1B22
ProteinModelPortal:Q06609 SMR:Q06609 DIP:DIP-462N IntAct:Q06609
MINT:MINT-1374477 STRING:Q06609 PhosphoSite:Q06609 DMDM:548663
PaxDb:Q06609 PRIDE:Q06609 DNASU:5888 Ensembl:ENST00000267868
Ensembl:ENST00000382643 Ensembl:ENST00000423169
Ensembl:ENST00000532743 Ensembl:ENST00000557850 GeneID:5888
KEGG:hsa:5888 UCSC:uc001zmi.4 UCSC:uc010bbw.3 GeneCards:GC15P040987
HGNC:HGNC:9817 HPA:CAB010381 MIM:179617 MIM:614508
neXtProt:NX_Q06609 PharmGKB:PA34176 PhylomeDB:Q06609
BindingDB:Q06609 ChiTaRS:RAD51 EvolutionaryTrace:Q06609
GenomeRNAi:5888 NextBio:22896 PMAP-CutDB:Q06609 ArrayExpress:Q06609
Bgee:Q06609 CleanEx:HS_RAD51 Genevestigator:Q06609
GermOnline:ENSG00000051180 Uniprot:Q06609
Length = 339
Score = 190 (71.9 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 63/219 (28%), Positives = 107/219 (48%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ LA +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 66 ISEAKADKILAEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 121
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 122 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 176
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + +++++ LL++DS AL G
Sbjct: 177 RYGLSG--SDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSG 234
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 235 RGELSARQMH-LARFLRMLLRLADEFGVAVVITNQVVAQ 272
Score = 62 (26.9 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R + SP P F IN G+
Sbjct: 293 AHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGV 334
>UNIPROTKB|P70099 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:10029 "Cricetulus griseus" [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0006268 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:Y08202 RefSeq:NP_001233686.1
ProteinModelPortal:P70099 SMR:P70099 GeneID:100689324
Uniprot:P70099
Length = 339
Score = 189 (71.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 63/219 (28%), Positives = 107/219 (48%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ LA +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 66 ISEAKADKILAEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 121
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 122 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 176
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + +++++ LL++DS AL G
Sbjct: 177 RYGLSG--SDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSG 234
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 235 RGELSARQMH-LARFLRMLLRLADEFGVAVVITNQVVAQ 272
Score = 63 (27.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R V SP P F IN G+
Sbjct: 293 AHASTTRLYLRKGRGETRICKVYDSPCLPEAEAMFAINADGV 334
>UNIPROTKB|G1K2Z8 [details] [associations]
symbol:RAD51 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006268
"DNA unwinding involved in replication" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:AADN02040043
ProteinModelPortal:G1K2Z8 Ensembl:ENSGALT00000007192 Uniprot:G1K2Z8
Length = 337
Score = 189 (71.6 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 64/219 (29%), Positives = 106/219 (48%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ LA +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 64 ISEAKADKILAEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 119
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TEL G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 120 ITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 174
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + + +++ LL++DS AL G
Sbjct: 175 RYGLSG--SDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSG 232
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 233 RGELSARQMH-LARFLRMLLRLADEFGVAVVITNQVVAQ 270
Score = 62 (26.9 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R + SP P F IN G+
Sbjct: 291 AHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGV 332
>UNIPROTKB|P37383 [details] [associations]
symbol:RAD51A "DNA repair protein RAD51 homolog 1"
species:9031 "Gallus gallus" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0006268 "DNA unwinding involved in
replication" evidence=ISS] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0007126
GO:GO:0048471 GO:GO:0005654 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 GO:GO:0003690 GO:GO:0003697 GO:GO:0000724
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0000800 Reactome:REACT_115612
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888 EMBL:L09655
EMBL:S59426 IPI:IPI00593131 PIR:S35642 RefSeq:NP_990504.1
UniGene:Gga.2303 ProteinModelPortal:P37383 SMR:P37383 STRING:P37383
Ensembl:ENSGALT00000032744 GeneID:396086 KEGG:gga:396086
InParanoid:P37383 NextBio:20816144 Uniprot:P37383
Length = 339
Score = 189 (71.6 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 64/219 (29%), Positives = 106/219 (48%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ LA +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 66 ISEAKADKILAEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 121
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TEL G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 122 ITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 176
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + + +++ LL++DS AL G
Sbjct: 177 RYGLSG--SDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSG 234
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 235 RGELSARQMH-LARFLRMLLRLADEFGVAVVITNQVVAQ 272
Score = 62 (26.9 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R + SP P F IN G+
Sbjct: 293 AHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGV 334
>UNIPROTKB|B0M1M6 [details] [associations]
symbol:pigRAD51 "Rad51" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051106
"positive regulation of DNA ligation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0006268 "DNA
unwinding involved in replication" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0000800
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:CU633257 EMBL:EU302125 EMBL:AB355632
RefSeq:NP_001116653.1 UniGene:Ssc.22664 SMR:B0M1M6 STRING:B0M1M6
Ensembl:ENSSSCT00000005265 GeneID:100141309 KEGG:ssc:100141309
Uniprot:B0M1M6
Length = 339
Score = 187 (70.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 63/219 (28%), Positives = 106/219 (48%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ L +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 66 ISEAKADKILTEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 121
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 122 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 176
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + +++++ LL+IDS AL G
Sbjct: 177 RYGLSG--SDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIIDSATALYRTDYSG 234
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 235 RGELSARQMH-LARFLRMLLRLADEFGVAVVITNQVVAQ 272
Score = 62 (26.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R + SP P F IN G+
Sbjct: 293 AHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGV 334
>UNIPROTKB|Q2KJ94 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0016605 GO:GO:0051260
GO:GO:0003690 GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:BC105458
IPI:IPI00686332 RefSeq:NP_001039644.1 UniGene:Bt.36197 HSSP:O73948
ProteinModelPortal:Q2KJ94 SMR:Q2KJ94 STRING:Q2KJ94 PRIDE:Q2KJ94
Ensembl:ENSBTAT00000003788 GeneID:514749 KEGG:bta:514749 CTD:5888
InParanoid:Q2KJ94 OrthoDB:EOG47H5QB NextBio:20871491 Uniprot:Q2KJ94
Length = 339
Score = 185 (70.2 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ L +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 66 ISEAKADKILTEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 121
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 122 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 176
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + +++++ LL++DS AL G
Sbjct: 177 RYGLSG--SDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSG 234
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 235 RGELSARQMH-LARFLRMLLRLADEFGVAVVITNQVVAQ 272
Score = 62 (26.9 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R + SP P F IN G+
Sbjct: 293 AHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGV 334
>UNIPROTKB|Q8MKI8 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9615 "Canis lupus familiaris" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006268 "DNA
unwinding involved in replication" evidence=ISS] [GO:0007126
"meiosis" evidence=ISS] [GO:0000794 "condensed nuclear chromosome"
evidence=ISS] [GO:0000793 "condensed chromosome" evidence=ISS]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0007126 GO:GO:0048471 GO:GO:0005759
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AB043896 RefSeq:NP_001003043.1
UniGene:Cfa.85 ProteinModelPortal:Q8MKI8 SMR:Q8MKI8 STRING:Q8MKI8
Ensembl:ENSCAFT00000014658 GeneID:403568 KEGG:cfa:403568
InParanoid:Q8MKI8 NextBio:20817076 Uniprot:Q8MKI8
Length = 339
Score = 185 (70.2 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ L +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 66 ISEAKADKILTEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 121
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 122 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 176
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + +++++ LL++DS AL G
Sbjct: 177 RYGLSG--SDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSG 234
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 235 RGELSARQMH-LARFLRMLLRLADEFGVAVVITNQVVAQ 272
Score = 62 (26.9 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R + SP P F IN G+
Sbjct: 293 AHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGV 334
>UNIPROTKB|O77507 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9986 "Oryctolagus cuniculus" [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0005759 GO:GO:0003684
GO:GO:0006281 GO:GO:0006310 GO:GO:0003690 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0006268
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AF017729 RefSeq:NP_001075493.1
UniGene:Ocu.2212 ProteinModelPortal:O77507 SMR:O77507 STRING:O77507
GeneID:100008661 Uniprot:O77507
Length = 339
Score = 185 (70.2 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ L +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 66 ISEAKADKILTEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 121
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 122 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 176
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + +++++ LL++DS AL G
Sbjct: 177 RYGLSG--SDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSG 234
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 235 RGELSARQMH-LARFLRMLLRLADEFGVTVVITNQVVAQ 272
Score = 62 (26.9 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R + SP P F IN G+
Sbjct: 293 AHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGV 334
>MGI|MGI:97890 [details] [associations]
symbol:Rad51 "RAD51 homolog" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO;IDA;IMP] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=TAS]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=TAS] [GO:0007126 "meiosis" evidence=IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016605 "PML
body" evidence=ISO] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:97890 GO:GO:0005524 GO:GO:0048471
GO:GO:0005654 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_120463 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 GO:GO:0007131 Reactome:REACT_27235 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13473 EMBL:D13803 EMBL:AK011242
EMBL:AK076468 EMBL:AK151157 EMBL:AK151177 EMBL:BC027384
IPI:IPI00118524 PIR:A48221 RefSeq:NP_035364.1 UniGene:Mm.330492
ProteinModelPortal:Q08297 SMR:Q08297 IntAct:Q08297 MINT:MINT-205669
STRING:Q08297 PhosphoSite:Q08297 PaxDb:Q08297 PRIDE:Q08297
Ensembl:ENSMUST00000028795 GeneID:19361 KEGG:mmu:19361
InParanoid:Q08297 NextBio:296421 Bgee:Q08297 CleanEx:MM_RAD51
Genevestigator:Q08297 GermOnline:ENSMUSG00000027323 Uniprot:Q08297
Length = 339
Score = 185 (70.2 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ L +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 66 ISEAKADKILTEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 121
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 122 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 176
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + +++++ LL++DS AL G
Sbjct: 177 RYGLSG--SDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSG 234
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 235 RGELSARQMH-LARFLRMLLRLADEFGVAVVITNQVVAQ 272
Score = 62 (26.9 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R + SP P F IN G+
Sbjct: 293 AHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGV 334
>UNIPROTKB|F1MW99 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:DAAA02048323
IPI:IPI00713775 Ensembl:ENSBTAT00000020012 Uniprot:F1MW99
Length = 382
Score = 209 (78.6 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 79/288 (27%), Positives = 127/288 (44%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH + T LD L GG+P TE+ G G GKTQ C++L++
Sbjct: 87 TALELLEQ----EHTQNFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAID 142
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMG----------ASSFPEIFHSKGMAQEMA 175
+P +GG++G ++ID E +F R++++ A + E H K +
Sbjct: 143 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAGTHMEEEHPKALQDFTL 202
Query: 176 GRILV-LQPTSLSEFTESLEKIKV--SLLQ--NQVKLLVIDSMEALVPGVHE--QRAPGQ 228
IL + ++TE L ++ + L ++V+L+++D + P H+ +
Sbjct: 203 ENILSHIYYFRCRDYTELLAQVYLLSDFLSEHSKVRLVIVDGIA--FPFRHDLDDLSLRT 260
Query: 229 HPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIV 288
L+ + SLA R+ +++TNQ+ K DR + +V
Sbjct: 261 RLLNGLAQQMISLANNHRLAVILTNQM--------------TTKFDR-------NQALLV 299
Query: 289 AVLGFHWAHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSG 335
LG W HA TIRL+ Q R + KSP+ F I P G
Sbjct: 300 PALGESWGHAATIRLIFHWDQKQSRLATLYKSPSQKESTVPFQITPQG 347
>UNIPROTKB|J3QKK3 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AC025521 EMBL:AC011195
HGNC:HGNC:9820 ProteinModelPortal:J3QKK3 Ensembl:ENST00000583539
Uniprot:J3QKK3
Length = 346
Score = 206 (77.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 78/286 (27%), Positives = 126/286 (44%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH G + T LD L GGVP TE+ G G GKTQ C++L++
Sbjct: 86 TALELLEQ----EHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 141
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIF----------HSKGMAQEMA 175
+P +GG+ G ++ID E +F R++++ + + H K +
Sbjct: 142 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTL 201
Query: 176 GRILV-LQPTSLSEFTESLEKIKV--SLLQ--NQVKLLVIDSMEALVPGVHE--QRAPGQ 228
IL + ++TE L ++ + L ++V+L+++D + P H+ +
Sbjct: 202 DNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIA--FPFRHDLDDLSLRT 259
Query: 229 HPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIV 288
L+ + SLA R+ +++TNQ+ K+DR + +V
Sbjct: 260 RLLNGLAQQMISLANNHRLAVILTNQM--------------TTKIDR-------NQALLV 298
Query: 289 AVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPS 334
LG W HA TIRL+ QR + KSP+ F I S
Sbjct: 299 PALGESWGHAATIRLIFHWDRKQRLATLYKSPSQKECTVLFQIKVS 344
>ZFIN|ZDB-GENE-040426-2286 [details] [associations]
symbol:rad51 "RAD51 homolog (RecA homolog, E.
coli) (S. cerevisiae)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0051597 "response to methylmercury" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382
ZFIN:ZDB-GENE-040426-2286 GO:GO:0005524 GO:GO:0046686 GO:GO:0003684
GO:GO:0006281 GO:GO:0051597 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:BX936455 IPI:IPI00496483
RefSeq:NP_998371.2 UniGene:Dr.1514 SMR:Q5TYR1
Ensembl:ENSDART00000060706 GeneID:406487 KEGG:dre:406487
InParanoid:Q5TYR1 NextBio:20818074 Uniprot:Q5TYR1
Length = 340
Score = 182 (69.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 61/218 (27%), Positives = 104/218 (47%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ L +++V F TA ++RA E + + T K LD L GG+ G
Sbjct: 67 ISEAKADKILTEAAKMVPMGFTTATEFHQRRA--EII--QISTGSKELDKLLQGGIETGS 122
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 123 ITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVA-----E 177
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQ 223
+ G ++ + + + T+ L + + +++ LL++DS AL +
Sbjct: 178 RYGLVG--SDVLDNVAYARAFNTDHQTQLLYQASAMMTESRYALLIVDSATALYRTDYSG 235
Query: 224 R---APGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
R + Q L + ++ LA+ + +V+TNQV Q
Sbjct: 236 RGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQ 273
Score = 62 (26.9 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L G+ R + SP P F IN G+
Sbjct: 294 AHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGV 335
>POMBASE|SPAC20H4.07 [details] [associations]
symbol:rad57 "RecA family ATPase Rad57/Rhp57"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000730 "DNA recombinase assembly" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0033062 "Rhp55-Rhp57 complex" evidence=NAS]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042148 "strand invasion" evidence=TAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR020588
PROSITE:PS50162 PomBase:SPAC20H4.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0007131
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000730 GO:GO:0033170 GO:GO:0042148
GO:GO:0033062 EMBL:AB024744 PIR:T43507 RefSeq:NP_593627.1
ProteinModelPortal:Q9UUL2 IntAct:Q9UUL2 STRING:Q9UUL2
EnsemblFungi:SPAC20H4.07.1 GeneID:2542007 KEGG:spo:SPAC20H4.07
KO:K10958 OMA:LERRTHC OrthoDB:EOG4HTD1G NextBio:20803087
Uniprot:Q9UUL2
Length = 354
Score = 180 (68.4 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 50/156 (32%), Positives = 87/156 (55%)
Query: 65 QTALLLMEQR-AATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLS 123
Q +LLL R +A++ +L T LD L GG+P G +TE+ G +G+GK+QFC++L
Sbjct: 55 QISLLLQPVRCSASKVTSKYLTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCMQLC 114
Query: 124 LLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIF---HSKGMAQEMAG-RIL 179
L+ LP GG++ ++I ES ++R+ E+ A PE + K + + G R+
Sbjct: 115 LMVQLPLSLGGMNKAAVFISTESGLETKRLFEL-ARYLPERYPKADKKDIIIKNPGDRVY 173
Query: 180 VLQPTSLSEFTESLEKIKVSLLQNQVK--LLVIDSM 213
+ L E E + + ++ +L N+ K L+++DS+
Sbjct: 174 TILCPDL-ESQEHIIQYQLPILFNRDKIGLVILDSV 208
Score = 63 (27.2 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 30/108 (27%), Positives = 42/108 (38%)
Query: 238 ITSLAEFSRIPIVVTNQVR---PQSHDESCLYPFQVQKMDRILKDRTRYYSHIVAVLGFH 294
+ +LA +V+ NQV P+ +D L+ Q D T I + LG
Sbjct: 245 LRTLAHQHEAAVVIANQVSDRIPRDYDAIGLFSLDYQSQWFSGWDDTDPNPKIPS-LGLV 303
Query: 295 WAHAVTIRLVLEAKSGQ------RFMNVEKSPTSPPLAFSFTINPSGI 336
W + ++ RL L K+ R V SP SP L I GI
Sbjct: 304 WTNNISTRLALIKKTDSATNNSGRIFRVVYSPNSPRLDVRICIGSVGI 351
>ZFIN|ZDB-GENE-050320-116 [details] [associations]
symbol:xrcc3 "X-ray repair complementing defective
repair in Chinese hamster cells 3" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 ZFIN:ZDB-GENE-050320-116
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:BX255905
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOVERGEN:HBG054179
OMA:INQVTEA IPI:IPI00494088 UniGene:Dr.75660
Ensembl:ENSDART00000010564 InParanoid:Q5TZD9 Uniprot:Q5TZD9
Length = 352
Score = 200 (75.5 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 69/253 (27%), Positives = 113/253 (44%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L++ G L LD + GG+P +TEL G + GKTQFCL+L L
Sbjct: 64 TALQLIQGECPVLEPGHRLSFACPVLDGLMRGGLPLRGITELAGESAAGKTQFCLQLCLS 123
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASS---FPEIFHSKGMAQEMAGRILVLQ 182
P +GGL+ G +YI E +F +R+ ++ P++ + + + I +
Sbjct: 124 VQYPQEHGGLNSGAVYICTEDSFPIKRLRQLITQQPRLRPDLPPALIHSLRFSDNIYIEH 183
Query: 183 PTSLSEFTESL-EKIKVSLLQNQVKLLVIDSMEALVPG---VHEQRAPGQHPLSWHISLI 238
L + +++ V L + V+LLV+DS+ AL E +H L++ S +
Sbjct: 184 AADLEALQVCVSQRVPVLLKRGLVRLLVVDSVAALFRSEFQADEAVQRSRHLLAFS-STL 242
Query: 239 TSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIVAVLGFHWAHA 298
L+ P++ NQV + P + D S ++ LG WA+
Sbjct: 243 HRLSHTYAAPVLCVNQVTDVVDGPN---PGRC--------DYGLVGSKVLPALGIAWANQ 291
Query: 299 VTIRLVLEAKSGQ 311
V +RL+L +GQ
Sbjct: 292 VMVRLMLRRLAGQ 304
>UNIPROTKB|E2RAE7 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 KO:K10880 CTD:7517 OMA:INQVTEA
EMBL:AAEX03006057 RefSeq:XP_003435154.1 Ensembl:ENSCAFT00000029054
GeneID:100687200 KEGG:cfa:100687200 Uniprot:E2RAE7
Length = 349
Score = 199 (75.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 79/290 (27%), Positives = 127/290 (43%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L E+ L LD L GG+P VTEL G + GKTQ L+L L
Sbjct: 64 TALQLCERAGGLPARPQRLSLGCPVLDRLLRGGLPLDGVTELAGLSSAGKTQLALQLCLA 123
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQ---EMAGRILVLQ 182
P +GGLD G +YI E F + R+ ++ A G + + +I +
Sbjct: 124 VQFPPRHGGLDAGAMYICTEDVFPNLRLQQLIAQQQRLRTDVPGEVVSRIKFSNQIFIEH 183
Query: 183 PTSLSEFTESL-EKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQHPLSWHISLI-TS 240
+ E + EK+ V L + +L+VIDS+ A P E P P + H+ + +
Sbjct: 184 VADVDSLLECVREKVPVLLSRGMARLVVIDSVAA--PFRCEFDGPALVPRARHLQALGAA 241
Query: 241 LAEFS---RIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIVAVLGFHWAH 297
L S + P++ NQV ++ +E P L+D + LG W++
Sbjct: 242 LRRLSCAFQSPVLCINQVT-EATEEQGTAP-----RPHGLRDE-----RVSPALGMTWSN 290
Query: 298 AVTIRLVLEAK---------SG--QRFMNVEKSPTSPPLAFSFTINPSGI 336
+ +RL++ + +G R ++V +P PP + S+T+N G+
Sbjct: 291 QLLMRLMVHRRRPGDEAVTPAGPPDRTLSVVFAPHLPPSSCSYTVNAEGV 340
>UNIPROTKB|F1S262 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004504 InterPro:IPR020588 PRINTS:PR01874
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:FP102481 Ensembl:ENSSSCT00000019210 Uniprot:F1S262
Length = 321
Score = 192 (72.6 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 73/265 (27%), Positives = 122/265 (46%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH + T LD L GGVP +TE+ G G GKTQ C++L++
Sbjct: 77 TALELLEQ----EHTQSFIITFCSALDNILGGGVPLTKITEICGAPGVGKTQLCMQLAVD 132
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKG--MAQEMAGRI--LVL 181
+P +GG++G ++ID E +F R++++ + + G M +E + L
Sbjct: 133 VQIPECFGGVEGEAVFIDTEGSFMVNRVVDLATACIQHLHLIAGTHMEEEQPKALQDFTL 192
Query: 182 QPTSLS--------EFTESLEKIKV--SLLQ--NQVKLLVIDSMEALVPGVHE--QRAPG 227
+ LS ++TE L ++ + L ++V+L+++D + P HE +
Sbjct: 193 E-NILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIA--FPFRHELDDLSLR 249
Query: 228 QHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHI 287
L+ + SLA R+ +++TNQ+ + + K + +L
Sbjct: 250 TRLLNGLAQQMISLANNHRLAVILTNQMTTK-----------IDKNEALL---------- 288
Query: 288 VAVLGFHWAHAVTIRLVLEAKSGQR 312
V LG W HA TIRL+ QR
Sbjct: 289 VPALGESWGHAATIRLIFHWDQRQR 313
>TAIR|locus:2174577 [details] [associations]
symbol:XRCC3 "homolog of X-ray repair cross complementing
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006302 "double-strand break repair"
evidence=RCA;IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IDA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003697 GO:GO:0045003 EMBL:AB011482
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AB062455 EMBL:AB073492
EMBL:AJ438908 EMBL:AJ438909 EMBL:AY032998 IPI:IPI00533166
RefSeq:NP_200554.1 RefSeq:NP_851202.1 UniGene:At.26227
UniGene:At.67214 ProteinModelPortal:Q9FKM5 SMR:Q9FKM5 STRING:Q9FKM5
EnsemblPlants:AT5G57450.1 EnsemblPlants:AT5G57450.2 GeneID:835850
KEGG:ath:AT5G57450 GeneFarm:4801 TAIR:At5g57450
HOGENOM:HOG000239162 InParanoid:Q9FKM5 KO:K10880 OMA:YSPETPN
PhylomeDB:Q9FKM5 ProtClustDB:CLSN2687414 Genevestigator:Q9FKM5
GermOnline:AT5G57450 Uniprot:Q9FKM5
Length = 304
Score = 189 (71.6 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 68/238 (28%), Positives = 106/238 (44%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
L T + LD L GG+ +TE+V +G GKTQ CL+LSL LP +GGL+G +Y+
Sbjct: 21 LTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISHGGLNGSSLYLH 80
Query: 144 VESTFTSRRMIEMGAS---SFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKV-- 198
E F RR+ ++ + S P I+ + + V S+ + + +I
Sbjct: 81 SEFPFPFRRLHQLSHTFHQSNPSIYANYN--DNPCDHVFVQNVHSVDHLFDIMPRIDGFV 138
Query: 199 --SLLQNQVKLLVIDSMEALVPGVHEQRAPG---QHPLSWHIS-LITSLAEFSRIPIVVT 252
S + +KL+V+DS+ AL + + L + IS + LA + IV+T
Sbjct: 139 GNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQLASKFDLAIVIT 198
Query: 253 NQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIVAVLGFHWAHAVTIRLVLEAKSG 310
NQV L ++ + R L R +V LG WA+ V R + G
Sbjct: 199 NQVTDLVETSDGLSGLRIGNL-RYLYSSGR---RVVPSLGLAWANCVNSRFFISRSDG 252
>UNIPROTKB|E1BRQ1 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 EMBL:AADN02025794 IPI:IPI00602048
ProteinModelPortal:E1BRQ1 Ensembl:ENSGALT00000008107 Uniprot:E1BRQ1
Length = 369
Score = 145 (56.1 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+E+ E G + T LD L GGV +TE+ G G GKTQ C++L++
Sbjct: 77 TALELLEE----EQTQGFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVD 132
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGAS 159
+P +GG+ G ++ID E +F R ++ +
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRAADIATA 166
Score = 91 (37.1 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 285 SHIVAVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSG 335
S +V LG W HA T+RL+ + QR + KSP+ + I P G
Sbjct: 288 SMLVPALGESWGHAATVRLIFHWDNTQRLATLYKSPSQKESTIPYNITPQG 338
>UNIPROTKB|F1NUE9 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007066 "female meiosis sister chromatid
cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007131 GO:GO:0007141 GO:GO:0008821
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0007066 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:AADN02025794 IPI:IPI00820436
Ensembl:ENSGALT00000039328 Uniprot:F1NUE9
Length = 373
Score = 145 (56.1 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+E+ E G + T LD L GGV +TE+ G G GKTQ C++L++
Sbjct: 82 TALELLEE----EQTQGFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVD 137
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGAS 159
+P +GG+ G ++ID E +F R ++ +
Sbjct: 138 VQIPECFGGVAGEAVFIDTEGSFMVDRAADIATA 171
Score = 91 (37.1 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 285 SHIVAVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSG 335
S +V LG W HA T+RL+ + QR + KSP+ + I P G
Sbjct: 293 SMLVPALGESWGHAATVRLIFHWDNTQRLATLYKSPSQKESTIPYNITPQG 343
>FB|FBgn0003479 [details] [associations]
symbol:spn-A "spindle A" species:7227 "Drosophila
melanogaster" [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;NAS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0007143
"female meiosis" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0009949 GO:GO:0007294 GO:GO:0003684 GO:GO:0007143
GO:GO:0008298 GO:GO:0030717 GO:GO:0000075 GO:GO:0045003
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D37788 EMBL:D17726 EMBL:L41342
EMBL:BT001791 RefSeq:NP_524583.1 RefSeq:NP_733342.1 UniGene:Dm.1913
ProteinModelPortal:Q27297 SMR:Q27297 DIP:DIP-20846N IntAct:Q27297
MINT:MINT-337614 STRING:Q27297 PaxDb:Q27297 PRIDE:Q27297
EnsemblMetazoa:FBtr0085589 GeneID:43577 KEGG:dme:Dmel_CG7948
CTD:43577 FlyBase:FBgn0003479 InParanoid:Q27297 OrthoDB:EOG4P2NHW
PhylomeDB:Q27297 GenomeRNAi:43577 NextBio:834653 Bgee:Q27297
GermOnline:CG7948 GO:GO:0009951 Uniprot:Q27297
Length = 336
Score = 168 (64.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 57/211 (27%), Positives = 97/211 (45%)
Query: 48 EVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTEL 107
+V + +++V F +A + RA L T K LD L GG+ G +TE+
Sbjct: 67 KVEQIITEANKLVPLGFLSARTFYQMRADVVQLS----TGSKELDKLLGGGIETGSITEI 122
Query: 108 VGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHS 167
G GKTQ C L++ LP G +G +YID E+TF R+ + A +
Sbjct: 123 FGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAI-AQRY------ 175
Query: 168 KGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQR--- 224
K E+ + + + + T+ ++ L +++ LL++DS AL + R
Sbjct: 176 KLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGEL 235
Query: 225 APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
A Q+ L + ++ LA+ + +V+TNQV
Sbjct: 236 AARQNHLGLFLRMLQRLADEFGVAVVITNQV 266
Score = 62 (26.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 291 LGFH-WAHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
+G H AH+ T RL L G+ R + SP P F I P GI
Sbjct: 283 IGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESEAMFAILPDGI 330
>FB|FBgn0003480 [details] [associations]
symbol:spn-B "spindle B" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IGI] [GO:0009949 "polarity
specification of anterior/posterior axis" evidence=IMP] [GO:0048477
"oogenesis" evidence=IGI;TAS] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0006417 "regulation of translation" evidence=TAS]
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0006281 "DNA
repair" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=TAS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0006302
"double-strand break repair" evidence=TAS] [GO:0007126 "meiosis"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
EMBL:AE014297 GO:GO:0005524 GO:GO:0009949 GO:GO:0007294
GO:GO:0006417 GO:GO:0003677 GO:GO:0006200 GO:GO:0006302
GO:GO:0030261 GO:GO:0008298 GO:GO:0030717 GO:GO:0007131
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HSSP:O74036
GO:GO:0009951 KO:K10880 OMA:YSPETPN EMBL:AF069531 EMBL:BT044133
EMBL:FJ219434 EMBL:FJ219442 EMBL:FJ219445 EMBL:FJ219448
RefSeq:NP_476740.1 UniGene:Dm.4725 SMR:O77135 IntAct:O77135
MINT:MINT-763026 STRING:O77135 EnsemblMetazoa:FBtr0082933
GeneID:41746 KEGG:dme:Dmel_CG3325 UCSC:CG3325-RA CTD:41746
FlyBase:FBgn0003480 HOGENOM:HOG000012350 InParanoid:O77135
OrthoDB:EOG49CNQT GenomeRNAi:41746 NextBio:825371 Uniprot:O77135
Length = 341
Score = 182 (69.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 59/178 (33%), Positives = 85/178 (47%)
Query: 91 LDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTS 150
LD GGV +TEL G AG GKTQ L+LSL LP GGL GV YI ES+F +
Sbjct: 95 LDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYICTESSFPA 154
Query: 151 RRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTES-LEKIKVSLLQNQVKLLV 209
RR+++M + E H + M G I V + +I + Q+ + L++
Sbjct: 155 RRLLQMSKAC--EKRHPE-MELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHGIGLII 211
Query: 210 IDSMEALVPGVHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQS-HDE-SCL 265
IDS+ A+ ++ +H +L+ S A+ +V NQV + DE CL
Sbjct: 212 IDSVAAIFRLYNDYLERARHMRRLADALL-SYADKYNCAVVCVNQVATRDGQDEIPCL 268
Score = 44 (20.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 288 VAVLGFHWAHAVTIRLVL-----EAKSGQRFMNVEK-----SPTSPPLAFSFTINPSGI 336
+ LG WAH RL + + + G + + V K SP +P F I G+
Sbjct: 265 IPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPETPNDFAEFLITAEGV 323
>TAIR|locus:2825233 [details] [associations]
symbol:RAD51D "homolog of RAD51 D" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISS;RCA;IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016444
"somatic cell DNA recombination" evidence=IMP] [GO:1900426
"positive regulation of defense response to bacterium"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=RCA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006281 EMBL:AC007583 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 Pfam:PF08423 EMBL:AJ549434
EMBL:AB194811 IPI:IPI00533353 PIR:H86212 RefSeq:NP_172254.2
UniGene:At.26372 ProteinModelPortal:Q9LQQ2 SMR:Q9LQQ2 STRING:Q9LQQ2
PRIDE:Q9LQQ2 EnsemblPlants:AT1G07745.1 GeneID:837289
KEGG:ath:AT1G07745 GeneFarm:4787 TAIR:At1g07745
HOGENOM:HOG000242993 InParanoid:Q9LQQ2 KO:K10871 OMA:RIKVERI
PhylomeDB:Q9LQQ2 ProtClustDB:CLSN2699036 Genevestigator:Q9LQQ2
GermOnline:AT1G07745 GO:GO:0002831 GO:GO:0016444 Uniprot:Q9LQQ2
Length = 322
Score = 185 (70.2 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 61/205 (29%), Positives = 106/205 (51%)
Query: 53 LALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAG 112
L+L+ E C P L L+E +H L T K D+ L GG G +TELVGP+
Sbjct: 62 LSLI-ERQCRPLVNGLKLLEDLHRNKHT---LSTGDKETDSLLQGGFREGQLTELVGPSS 117
Query: 113 TGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQ 172
+GKTQFC++ + A H G V+Y+D ++F++RR+ + SS K M++
Sbjct: 118 SGKTQFCMQAAASVA-ENHLGR----VLYLDTGNSFSARRIAQFICSSSDATLGQKVMSR 172
Query: 173 EMAGRILVLQPTSLSEFTESLE---KIKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQH 229
+ + + +L + + LE ++++++ +++++LLV+DS+ +L+ +
Sbjct: 173 ILCHTVYDIY--TLFDTLQDLEITLRLQMNVNESRLRLLVVDSISSLITPILGGSGSQGR 230
Query: 230 PLSWHIS-LITSLAEFSRIPIVVTN 253
L I L+ LA I I+VTN
Sbjct: 231 ALMVAIGYLLKKLAHEHSIAILVTN 255
>UNIPROTKB|H7C2Q5 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C2Q5 Ensembl:ENST00000425173 Bgee:H7C2Q5
Uniprot:H7C2Q5
Length = 213
Score = 168 (64.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 40/111 (36%), Positives = 62/111 (55%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L+EQ EH G + T LD L GGVP TE+ G G GKTQ C++L++
Sbjct: 18 TALELLEQ----EHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 73
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAG 176
+P +GG+ G ++ID E +F R++++ + I H + +A++ G
Sbjct: 74 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATAC---IQHLQLIAEKHKG 121
>UNIPROTKB|Q5ZM26 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162 KO:K10880
CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AADN02003784 EMBL:AJ719558 IPI:IPI00684938
RefSeq:NP_001006489.1 UniGene:Gga.3684 STRING:Q5ZM26
Ensembl:ENSGALT00000032496 GeneID:423485 KEGG:gga:423485
InParanoid:Q5ZM26 NextBio:20825955 Uniprot:Q5ZM26
Length = 347
Score = 185 (70.2 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 95/355 (26%), Positives = 139/355 (39%)
Query: 12 PKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSEVRSALALVSEIVCPPFQ-TALLL 70
PK IA + A +I + K+ + ++V L VS + TAL L
Sbjct: 10 PKVIAALKKA-DIKSIKEVLNLSGADLQRLMKLSSADVECLLKTVSRALRKNCMLTALQL 68
Query: 71 MEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPA 130
+ + L LD L GG+P +TEL G + GKTQ L+L L P
Sbjct: 69 YQDKDCFSSQCQKLSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQYPY 128
Query: 131 HYGGLDGGVIYIDVESTFTSRRMIEMGASSF-------PEIFHSKGMAQEMAGRILVLQP 183
YGGL+ G +YI E F S+R+ ++ A PEI I V
Sbjct: 129 RYGGLESGAVYICTEDAFPSKRLQQLIAQQHKLRADVPPEIIQKI----RFGNSIFVEHA 184
Query: 184 TSLSEFTESLEKIKVSLL--QNQVKLLVIDSMEALVP---GVHEQRAPGQHPLSWHISLI 238
L F + K ++SLL + V+L+VIDS+ AL G + ++ ++ L
Sbjct: 185 ADLDTFHNCITK-RLSLLLTRGMVRLVVIDSIAALFRCEFGASDSVLKARYLQTFGAQLH 243
Query: 239 TSLAEFSRIPIVVTNQVRP---QSHDESCLYPFQVQKMDRILKDRTRYYSHIVAVLGFHW 295
F R PI+ NQV +S C Y D S + LG W
Sbjct: 244 GLSTRF-RTPIMCINQVTDAVSESEAAQCSY----STAD----------SRVSPALGITW 288
Query: 296 AHAVTIRLVL------EAKSG--------QRFMNVEKSPTSPPLAFSFTINPSGI 336
A+ + +RL++ E G R + V +P PP FT+ G+
Sbjct: 289 ANQLLMRLMVSRVPQPEPSPGAVSHHPASMRTLRVVFAPHLPPSFCCFTVKLEGV 343
>ASPGD|ASPL0000057020 [details] [associations]
symbol:uvsC species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0006312 "mitotic recombination" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0006311 "meiotic gene conversion"
evidence=IEA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0030998 "linear element" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IEA]
[GO:0000150 "recombinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0043047 "single-stranded telomeric DNA
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProteinModelPortal:C8VSQ3
SMR:C8VSQ3 EnsemblFungi:CADANIAT00001386 Uniprot:C8VSQ3
Length = 348
Score = 165 (63.1 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 60/218 (27%), Positives = 103/218 (47%)
Query: 46 LSEVRSALALV--SEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ LV +++V F TA + +R+ E + + T K LD L GG+ G
Sbjct: 67 ISEQKATKILVEAAKLVPMGFTTATEMHARRS--ELIS--ITTGSKQLDTLLGGGIETGS 122
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGK+Q C L++ LP GG +G +YID E TF R++ + A +
Sbjct: 123 ITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDTEGTFRPVRLLAV-AQRYGL 181
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQ 223
+ +E+ + + + + L + + + + LLV+DS +L
Sbjct: 182 V------GEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLLVVDSATSLYRTDFNG 235
Query: 224 R---APGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
R + Q L+ + + LA+ I +V+TNQV Q
Sbjct: 236 RGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQ 273
Score = 59 (25.8 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 296 AHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAFSFTINPSGI 336
AHA T RL L+ G+ R + SP P F IN GI
Sbjct: 296 AHASTTRLSLKKGRGETRVCKIYDSPCLPESDCLFAINEDGI 337
>UNIPROTKB|F1S9W9 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:INQVTEA
EMBL:CU694215 Ensembl:ENSSSCT00000002829 Uniprot:F1S9W9
Length = 347
Score = 176 (67.0 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 57/209 (27%), Positives = 91/209 (43%)
Query: 12 PKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSEVRSAL-ALVSEIVCPPFQTALLL 70
P+ +A + + + +A++ + +V+ L A+ S + TAL L
Sbjct: 10 PRIVAAVKVSAKLKSAREVLRFSGPDLQRLTGLSGPDVQHLLRAVSSHLRGGSVSTALQL 69
Query: 71 MEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPA 130
Q L LD L GG+P +TEL G + TGKTQ L+L L LP
Sbjct: 70 YRQEEEFPEQHQRLSLGCPVLDGLLRGGLPLDGITELAGRSSTGKTQLALQLCLAVQLPR 129
Query: 131 HYGGLDGGVIYIDVESTFTSRRMIEMGASSF---PEIFHSKGMAQEMAGRILVLQPTSLS 187
+GGL G +Y+ E F SRR+ ++ A P++ + +I V +
Sbjct: 130 QHGGLGTGAVYVCTEGAFPSRRLQQLVAQQQLLRPDVPGDVLGKIKFGDQIFVEHVADVD 189
Query: 188 EFTESLE-KIKVSLLQNQVKLLVIDSMEA 215
+ + K+ V L + +LLVIDS+ A
Sbjct: 190 TLLDCVSRKVPVLLSRGVARLLVIDSVAA 218
Score = 44 (20.5 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 11/54 (20%), Positives = 26/54 (48%)
Query: 291 LGFHWAHAVTIRLVLEAKSGQ--------RFMNVEKSPTSPPLAFSFTINPSGI 336
LG W+ + +RL+++ + + R + + +P PP + +T+ G+
Sbjct: 281 LGITWSSQLLMRLLMDRRRPEEAAPAPPSRTLRLVFAPHLPPWSCCYTVTTEGV 334
>UNIPROTKB|Q08DH8 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 EMBL:BC123742 IPI:IPI00717766 RefSeq:NP_001071585.1
UniGene:Bt.41484 ProteinModelPortal:Q08DH8 STRING:Q08DH8
PRIDE:Q08DH8 Ensembl:ENSBTAT00000013145 GeneID:768244
KEGG:bta:768244 CTD:7517 HOVERGEN:HBG054179 InParanoid:Q08DH8
OMA:INQVTEA OrthoDB:EOG47D9GS NextBio:20918540 Uniprot:Q08DH8
Length = 341
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 83/289 (28%), Positives = 125/289 (43%)
Query: 43 DVELSEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFG 102
DV+L SA L VC TAL L+ Q L LDA L GG+P
Sbjct: 45 DVQLLLRASASLLRGHGVC----TALHLLRQEGPFPEQHQRLSLGCPVLDALLRGGLPLD 100
Query: 103 VVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFP 162
+TEL G + GKTQ L+L L LP +GGL G +Y+ E F SRR+ ++ A
Sbjct: 101 GITELAGRSSAGKTQLALQLCLAVQLPPRHGGLGAGAVYVCTEDAFPSRRLQQLIAQQQR 160
Query: 163 EIFHSKG--MAQEMAG-RILVLQPTSLSEFTESL-EKIKVSLLQNQVKLLVIDSMEALVP 218
G +++ G +I + + + + EK+ V L + +L+VIDS+ A
Sbjct: 161 LRADVPGHVISKIRFGHQIFIEHAADVDTLLQCVREKVPVLLARGMARLVVIDSVAAPFR 220
Query: 219 GVHEQRA---PGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDR 275
+ A Q L+ L F R P++ NQV E+ V++ D
Sbjct: 221 CEFDGAALALRAQRLLALGAELRRLSCAF-RSPVLCVNQVT-----EA------VEEQDL 268
Query: 276 ILKDRTRYYSHIVAVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPTSPP 324
+ + LG WA+ + +RL+ + QR E++P +PP
Sbjct: 269 VAGP-----PGMSPALGITWANQLLVRLLADR---QR---PEEAPLTPP 306
>RGD|1306849 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0010033 "response to organic substance"
evidence=IEP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306849
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0010033 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OrthoDB:EOG47D9GS
IPI:IPI00368372 Ensembl:ENSRNOT00000016208 UCSC:RGD:2325124
Uniprot:D4A5N4
Length = 349
Score = 181 (68.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 75/292 (25%), Positives = 126/292 (43%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
TAL L +QR + L LD L GG+P +T L G + GKTQ L+L L
Sbjct: 64 TALHLFQQRESFPEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGRSSAGKTQLALQLCLA 123
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHS-KG-MAQEM--AGRILVL 181
P YGGL+ G +YI E F S+R+ ++ E+ G + Q++ I +
Sbjct: 124 VQFPRQYGGLEAGAVYICTEDAFPSKRLWQL-IEQLQELRTDVPGEVTQKIRFGNHIFIE 182
Query: 182 QPTSLSEFTESLEK-IKVSLLQNQVKLLVIDSMEALVPGVHEQRAPGQHPLSWHISLITS 240
+ E + K + + L + +L+V+DS+ A +A H SL +
Sbjct: 183 HAADVDTLMECVSKRVPILLSRGMARLVVVDSIAAPFRCEFHLQASAVRAKHLH-SLGAA 241
Query: 241 LAEFS---RIPIVVTNQVRPQSHDES----CLYPFQVQKMDRILKDRTRYYSHIVAVLGF 293
L S R P++ NQV D+ CL ++ +++ L + + ++ L
Sbjct: 242 LQRLSSTFRSPVLCINQVTEMVEDQESAGLCLRAWE-ERLSPALG--ITWANQLLMQLMV 298
Query: 294 HWAHAVTIRLVLEAKSGQRFMNVEKSPTSPPLAFSFTINPSGISLLTDDGTE 345
H ++ L +S R + V +P P + +T++ G+ + GTE
Sbjct: 299 DRIHEDSVTTGLP-RSPARTLRVLFAPHLPLSSCCYTVSGEGVRGMA--GTE 347
>GENEDB_PFALCIPARUM|MAL8P1.76 [details] [associations]
symbol:MAL8P1.76 "meiotic recombination protein
dmc1-like protein" species:5833 "Plasmodium falciparum" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 158 (60.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 61/213 (28%), Positives = 98/213 (46%)
Query: 47 SEVRSALALVSEIV-CPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVT 105
++V L + S+I C F TA L+++R+ + T D L GG+ +T
Sbjct: 76 AKVDKILEVASKIENCSSFITANELVQKRSKVLKI----TTGSTVFDQTLGGGIESMCIT 131
Query: 106 ELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIF 165
EL G GKTQ C L++ A LP G +G V YID E TF ++ ++ E +
Sbjct: 132 ELFGENRCGKTQVCHTLAVTAQLPKSLNGGNGKVCYIDTEGTFRPEKVCKIA-----ERY 186
Query: 166 HSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQR- 224
G A + IL + + + L + + LLV+DS+ +L R
Sbjct: 187 GLDGEA--VLDNILYARAFTHEHLYQLLAISAAKMCEEPFALLVVDSIISLFRVDFSGRG 244
Query: 225 --APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
+ Q L+ +S+++ L+E I I++TNQV
Sbjct: 245 ELSERQQKLNKTMSILSKLSEQFNIAILITNQV 277
Score = 63 (27.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 297 HAVTIRLVL-EAKSGQRFMNVEKSPTSPPLAFSFTINPSGISLLTD 341
HA TIRL L + K QR V +P P + F ++ G+ TD
Sbjct: 302 HASTIRLSLRKGKGDQRVCKVYDAPNLPEVECIFQLSDKGVIDATD 347
>UNIPROTKB|Q8IB05 [details] [associations]
symbol:MAL8P1.76 "Meiotic recombination protein dmc1-like
protein" species:36329 "Plasmodium falciparum 3D7" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 158 (60.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 61/213 (28%), Positives = 98/213 (46%)
Query: 47 SEVRSALALVSEIV-CPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVT 105
++V L + S+I C F TA L+++R+ + T D L GG+ +T
Sbjct: 76 AKVDKILEVASKIENCSSFITANELVQKRSKVLKI----TTGSTVFDQTLGGGIESMCIT 131
Query: 106 ELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIF 165
EL G GKTQ C L++ A LP G +G V YID E TF ++ ++ E +
Sbjct: 132 ELFGENRCGKTQVCHTLAVTAQLPKSLNGGNGKVCYIDTEGTFRPEKVCKIA-----ERY 186
Query: 166 HSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQR- 224
G A + IL + + + L + + LLV+DS+ +L R
Sbjct: 187 GLDGEA--VLDNILYARAFTHEHLYQLLAISAAKMCEEPFALLVVDSIISLFRVDFSGRG 244
Query: 225 --APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
+ Q L+ +S+++ L+E I I++TNQV
Sbjct: 245 ELSERQQKLNKTMSILSKLSEQFNIAILITNQV 277
Score = 63 (27.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 297 HAVTIRLVL-EAKSGQRFMNVEKSPTSPPLAFSFTINPSGISLLTD 341
HA TIRL L + K QR V +P P + F ++ G+ TD
Sbjct: 302 HASTIRLSLRKGKGDQRVCKVYDAPNLPEVECIFQLSDKGVIDATD 347
>UNIPROTKB|B6JXU7 [details] [associations]
symbol:SJAG_01410 "DNA repair protein RAD51" species:402676
"Schizosaccharomyces japonicus yFS275" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0003684 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z EMBL:DS022225
RefSeq:XP_002172658.1 ProteinModelPortal:B6JXU7 GeneID:7048158
Uniprot:B6JXU7
Length = 370
Score = 180 (68.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 57/179 (31%), Positives = 86/179 (48%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
+ T K LD L GGV G +TEL G TGK+Q C L++ LP GG +G +YID
Sbjct: 128 ITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYID 187
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN 203
E TF R++ + E + G +E+ + + + E L++ + ++
Sbjct: 188 TEGTFRPVRLLAVA-----ERYGLNG--EEVLDNVAYARAYNADHQLELLQQAANMMAES 240
Query: 204 QVKLLVIDSMEALV----PGVHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
+ LLV+DS AL G E A H L+ + + LA+ I +V+TNQV Q
Sbjct: 241 RFSLLVVDSCTALYRTDFSGRGELSARQMH-LARFMRTLQRLADEFGIAVVITNQVVAQ 298
>MGI|MGI:1921585 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:1921585
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AK014491 IPI:IPI00110210 RefSeq:NP_083151.1 UniGene:Mm.19082
ProteinModelPortal:Q9CXE6 SMR:Q9CXE6 STRING:Q9CXE6
PhosphoSite:Q9CXE6 PRIDE:Q9CXE6 DNASU:74335
Ensembl:ENSMUST00000021715 GeneID:74335 KEGG:mmu:74335
UCSC:uc007pdz.1 InParanoid:Q9CXE6 NextBio:340475 Bgee:Q9CXE6
Genevestigator:Q9CXE6 GermOnline:ENSMUSG00000021287 Uniprot:Q9CXE6
Length = 349
Score = 176 (67.0 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 66/250 (26%), Positives = 109/250 (43%)
Query: 66 TALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLL 125
+AL L +Q+ + L LD L GG+P +T L G + GKTQ L+L L
Sbjct: 64 SALHLFQQKESFPEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLA 123
Query: 126 AALPAHYGGLDGGVIYIDVESTFTSRRMIEMGA------SSFPEIFHSKGMAQEMAGRIL 179
P YGGL+ G +YI E F S+R+ ++ A + PE K + I
Sbjct: 124 VQFPRQYGGLEAGAVYICTEDAFPSKRLWQLIAQQRRLRTDAPEELIEK---IRFSNHIF 180
Query: 180 VLQPTSLSEFTESL-EKIKVSLLQNQVKLLVIDSMEALVP-GVHEQRAPGQHPLSWHI-S 236
+ + E + +K+ + L + +L+V+DS+ A H Q + + L + +
Sbjct: 181 IEHAADVDTLLECVSKKVPILLSRGMARLVVVDSIAAPFRCEFHLQASAIRAKLLLSLGA 240
Query: 237 LITSLAEFSRIPIVVTNQVRPQSHDESCLYPFQVQKMDRILKDRTRYYSHIVAVLGFHWA 296
+ L+ R P++ NQV D+ Q + R L S LG WA
Sbjct: 241 TLRRLSSTFRSPVLCINQVTDMVEDQ--------QSVSRSLGASEERLS---PALGITWA 289
Query: 297 HAVTIRLVLE 306
+ + +RL+++
Sbjct: 290 NQLLMRLMVD 299
>POMBASE|SPAC644.14c [details] [associations]
symbol:rad51 "RecA family recombinase Rad51/Rhp51"
species:4896 "Schizosaccharomyces pombe" [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IMP] [GO:0000723 "telomere maintenance" evidence=IGI]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=NAS]
[GO:0000794 "condensed nuclear chromosome" evidence=ISO]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006311 "meiotic gene conversion" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=IGI] [GO:0007533
"mating type switching" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0030998 "linear element" evidence=IDA]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=TAS] [GO:0042148 "strand invasion" evidence=TAS]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IDA]
[GO:0051260 "protein homooligomerization" evidence=IPI]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
PomBase:SPAC644.14c GO:GO:0005524 GO:GO:0005635 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003684 GO:GO:0051260 GO:GO:0000790
GO:GO:0000724 GO:GO:0006312 GO:GO:0000723 SUPFAM:SSF47794
GO:GO:0042138 GO:GO:0043047 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0006311 GO:GO:0007533
GO:GO:0030998 GO:GO:0003691 GO:GO:0000711 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D13805 EMBL:Z22691 EMBL:Z24756 PIR:S42107
ProteinModelPortal:P36601 SMR:P36601 DIP:DIP-29235N IntAct:P36601
MINT:MINT-239321 STRING:P36601 OrthoDB:EOG41CB4Z NextBio:20804587
GO:GO:0033170 GO:GO:0042148 Uniprot:P36601
Length = 365
Score = 176 (67.0 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 56/179 (31%), Positives = 86/179 (48%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
+ T K LD L GGV G +TEL G TGK+Q C L++ LP GG +G +YID
Sbjct: 124 ITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYID 183
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN 203
E TF R++ + + + G +E+ + + + E L++ + ++
Sbjct: 184 TEGTFRPVRLLAVA-----DRYGLNG--EEVLDNVAYARAYNADHQLELLQQAANMMSES 236
Query: 204 QVKLLVIDSMEALV----PGVHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
+ LLV+DS AL G E A H L+ + + LA+ I +V+TNQV Q
Sbjct: 237 RFSLLVVDSCTALYRTDFSGRGELSARQMH-LARFMRTLQRLADEFGIAVVITNQVVAQ 294
>UNIPROTKB|A3E3X4 [details] [associations]
symbol:rad51 "Rad51" species:4754 "Pneumocystis carinii"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865192 EMBL:DQ865193
ProteinModelPortal:A3E3X4 SMR:A3E3X4 Uniprot:A3E3X4
Length = 343
Score = 174 (66.3 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 60/227 (26%), Positives = 107/227 (47%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ ++ S++V F TA ++R E + + T K LD L GG+ G
Sbjct: 68 ISEAKADKLISEASKLVPMGFTTATEFHQRRC--ELIS--ITTGSKQLDTLLAGGIETGS 123
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGK+Q C L++ LP GG +G +YID E TF R++ + +
Sbjct: 124 ITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPTRLLAVA-----D 178
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G +E+ + + + + L + + +++ LL++DS +L G
Sbjct: 179 RYGLNG--EEVLDNVAYARAYNADHQLQLLGQAANMMAESRFSLLIVDSATSLYRTDFAG 236
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLY 266
E A H L+ + + LA+ I +V+TNQV Q + ++
Sbjct: 237 RGELSARQMH-LAKFLRTLQRLADEYGIAVVITNQVVAQVDGNASMF 282
>UNIPROTKB|A3E3X6 [details] [associations]
symbol:rad51 "Rad51" species:263815 "Pneumocystis murina"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865194 EMBL:DQ865195
ProteinModelPortal:A3E3X6 SMR:A3E3X6 Uniprot:A3E3X6
Length = 343
Score = 174 (66.3 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 60/227 (26%), Positives = 107/227 (47%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ ++ S++V F TA ++R E + + T K LD L GG+ G
Sbjct: 68 ISEAKADKLISEASKLVPMGFTTATEFHQRRC--ELIS--ITTGSKQLDTLLAGGIETGS 123
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGK+Q C L++ LP GG +G +YID E TF R++ + +
Sbjct: 124 ITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPTRLLAVA-----D 178
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G +E+ + + + + L + + +++ LL++DS +L G
Sbjct: 179 RYGLNG--EEVLDNVAYARAYNADHQLQLLGQAANMMAESRFSLLIVDSATSLYRTDFAG 236
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLY 266
E A H L+ + + LA+ I +V+TNQV Q + ++
Sbjct: 237 RGELSARQMH-LAKFLRTLQRLADEYGIAVVITNQVVAQVDGNASMF 282
>UNIPROTKB|Q2HJ51 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 EMBL:BC113309 IPI:IPI00716231 RefSeq:NP_001039769.1
UniGene:Bt.59591 ProteinModelPortal:Q2HJ51 STRING:Q2HJ51
Ensembl:ENSBTAT00000025404 GeneID:529507 KEGG:bta:529507 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 InParanoid:Q2HJ51
OMA:QARTQDE OrthoDB:EOG4K0QP3 NextBio:20875047 Uniprot:Q2HJ51
Length = 326
Score = 168 (64.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 64/220 (29%), Positives = 106/220 (48%)
Query: 55 LVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTG 114
L+++ PF A L E + +T L T + LD L G+ G VTE+VG G+G
Sbjct: 57 LLAQFSAFPFNGADLYEELKTSTAILS----TGIGSLDKLLDAGLYTGEVTEIVGAPGSG 112
Query: 115 KTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEM 174
KTQ CL +AA AH GL V+YID T+ R++++ + P+ G Q
Sbjct: 113 KTQVCL---CVAAHVAH--GLQQNVLYIDSNGGLTASRILQLLQARTPDEEEQAGALQ-- 165
Query: 175 AGRILVLQPTSLSEFTESLEKIK------VSLLQNQVKLLVIDSMEALV-PGVHEQRAPG 227
RI V++ + + + L+ ++ VS +K++V+DS+ A+V P + Q+ G
Sbjct: 166 --RIQVVRAFDIFQMLDVLQDLRGAVSQQVSSSSGTLKVVVVDSVAAVVAPLLGGQQREG 223
Query: 228 QHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYP 267
+ + +LA + ++VTN + + D L P
Sbjct: 224 LALMMQLARELKTLARDLSVAVLVTNHMT-RDRDSGQLKP 262
Score = 41 (19.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 280 RTRYYSHIVAVLGFHWAHAVTIRLVLEA--KSGQ----RFMNVEKSPTSP 323
R R + LG W+ + RL+L++ SG R + + KSP P
Sbjct: 253 RDRDSGQLKPALGRSWSFVPSTRLLLDSTQSSGSLGSWRVVCLTKSPRLP 302
>UNIPROTKB|G4MNW7 [details] [associations]
symbol:MGG_06985 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
EMBL:CM001231 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10958 RefSeq:XP_003709736.1 ProteinModelPortal:G4MNW7
EnsemblFungi:MGG_06985T0 GeneID:2685158 KEGG:mgr:MGG_06985
Uniprot:G4MNW7
Length = 548
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 57/174 (32%), Positives = 88/174 (50%)
Query: 91 LDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTS 150
LDAAL GG+P G VTE+ G +G GKTQF L L L LP +G L +YI E+ ++
Sbjct: 144 LDAALGGGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPPHG-LGRKAMYIPTEAALST 202
Query: 151 RRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSL--LQNQVKLL 208
RR+ +M A++ P + + + IL LQP E + + +V L + V L+
Sbjct: 203 RRVAQMLAAN-PLLLSAS--PRPSLDSILSLQPLGDIEAQDHILSFQVPLEAARRNVGLI 259
Query: 209 VIDSMEALVPGVHE---QRAPGQHPLSWHI----SLITSLAEFSRIPIVVTNQV 255
++DS+ A ++ R+ G S + + +LA + +VV NQV
Sbjct: 260 ILDSVAANFRAEYDAAGSRSTGLAARSAELVRLGMQLRNLARSLNLAVVVANQV 313
>UNIPROTKB|Q9C0P6 [details] [associations]
symbol:dmc1 "Putative DMC1 protein" species:5322 "Pleurotus
ostreatus" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AJ311528 EMBL:AJ308557 ProteinModelPortal:Q9C0P6
Uniprot:Q9C0P6
Length = 347
Score = 173 (66.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 58 EIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQ 117
+I+ F T + + E+R + T K +D L GG+ V+E+ G TGKTQ
Sbjct: 88 KILGSSFATGIEIQEKRKRVNTIS----TGSKNVDVILGGGIMSQSVSEVYGEFRTGKTQ 143
Query: 118 FCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKG-MAQEMAG 176
+S++A LP GG G V YID E TF R+ S E F G +A E
Sbjct: 144 LAHTMSVVAQLPPDLGGASGKVAYIDTEGTFRPDRI-----RSIAERFGVDGSLALE--- 195
Query: 177 RILVLQPTSLSEFTESLEKIKVSLLQNQ-VKLLVIDSMEALVPGVHEQR---APGQHPLS 232
IL + + E + + + +++ +LL++DS+ AL + R + Q L+
Sbjct: 196 NILYARAFNSEHQMELINECSMRFAEDKDFRLLIVDSIMALFRVDYSGRGELSERQQKLA 255
Query: 233 WHISLITSLAEFSRIPIVVTNQVR 256
+S +T L+E I +++TNQV+
Sbjct: 256 QMLSRLTKLSEEYNIAVLLTNQVQ 279
>DICTYBASE|DDB_G0283637 [details] [associations]
symbol:xrcc3 "putative DNA repair protein XRCC3"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0283637 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0003677
GO:GO:0006310 GO:GO:0006302 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 RefSeq:XP_638929.1
ProteinModelPortal:Q54QU4 EnsemblProtists:DDB0232275 GeneID:8624168
KEGG:ddi:DDB_G0283637 InParanoid:Q54QU4 Uniprot:Q54QU4
Length = 564
Score = 158 (60.7 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 84 LPTRLKGLDAALCGGV-PFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYI 142
L T K +D L GG+ P G+ TE+ G +G+GKTQ C++LSL LP GGL+G +YI
Sbjct: 167 LSTGCKIMDKCLGGGISPIGI-TEIAGESGSGKTQLCIQLSLQVQLPFEMGGLNGACLYI 225
Query: 143 DVESTFTSRRMIEM 156
E F ++R+ +M
Sbjct: 226 TTEPPFPTKRLNQM 239
Score = 57 (25.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 178 ILVLQPTSLSEFTESL-EKIKVSLLQNQVKLLVIDSMEALVP---GVHEQRAPGQHPLSW 233
I + T++ + L +I L + ++LL+IDS+ AL+ G + + L W
Sbjct: 284 IFIQSTTTIDSLMDLLINQITGYLEKKTIRLLIIDSIAALLRHEYGNEKSEIIEKTKLLW 343
Query: 234 HIS-LITSLAEFSRIPIVVTNQV 255
++ + + E I IVV NQV
Sbjct: 344 SLANRLKLINEQYGITIVVVNQV 366
Score = 41 (19.5 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 285 SHIVAVLGFHWAHAVTIRLVLEAKSGQRFMNVEKSPT 321
S + LG WA+ + R +L+ + +PT
Sbjct: 496 STTIPALGLSWANFINSRFLLQRSKSTVPDPINNNPT 532
>UNIPROTKB|Q6BP40 [details] [associations]
symbol:DEHA2E16742g "DEHA2E16742p" species:284592
"Debaryomyces hansenii CBS767" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0003690 GO:GO:0003697
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR382137
GenomeReviews:CR382137_GR HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 RefSeq:XP_460030.2 ProteinModelPortal:Q6BP40
STRING:Q6BP40 GeneID:2902232 KEGG:dha:DEHA2E16742g Uniprot:Q6BP40
Length = 330
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 57/176 (32%), Positives = 78/176 (44%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
L T K LD L GGV +TE+ G GKTQ C L + A LP GG +G V YID
Sbjct: 93 LSTGSKQLDDVLGGGVSSMSITEVFGEFRCGKTQLCHTLCVTAQLPKEMGGSEGKVAYID 152
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN 203
E TF R+ S E F A I + + E E++ +
Sbjct: 153 TEGTFRPDRI-----RSIAERFQVD--ADACLENISYARALNSEHQMELAEQLGLQFADG 205
Query: 204 QVKLLVIDSMEALVPGVHEQRAP---GQHPLSWHISLITSLAEFSRIPIVVTNQVR 256
+LLV+DS+ A + R Q L+ H+S + LAE + + +TNQV+
Sbjct: 206 TYRLLVVDSIMACFRVDYSGRGELNDRQQKLNQHLSSLIRLAEDYNVAVFLTNQVQ 261
>UNIPROTKB|Q9P972 [details] [associations]
symbol:LIM15/DMC1 homolog "LIM15/DMC1 homolog protein"
species:5346 "Coprinopsis cinerea" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
HSSP:Q06609 EMBL:AB036801 ProteinModelPortal:Q9P972 Uniprot:Q9P972
Length = 345
Score = 172 (65.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 58/178 (32%), Positives = 88/178 (49%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
+ T K +D L GGV +TE+ G TGKTQ +S++A LP YGG G V YID
Sbjct: 108 ISTGSKLVDGILGGGVMSQSITEVYGEYRTGKTQLAHTMSVVAQLPPEYGGAAGKVAYID 167
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKG-MAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQ 202
E TF R+ + + F G MA E IL + + E + + +
Sbjct: 168 TEGTFRPDRI-----RAIADRFGVDGTMALE---NILYARAFNSEHQMELINECSARFAE 219
Query: 203 NQ-VKLLVIDSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQVR 256
++ +LL+IDS+ AL + R + Q L+ +S +T L+E I +++TNQV+
Sbjct: 220 DKDFRLLIIDSIMALFRVDYSGRGELSERQQKLAQMLSKLTKLSEEFNIAVLMTNQVQ 277
>DICTYBASE|DDB_G0273611 [details] [associations]
symbol:rad51-2 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 171 (65.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 58/206 (28%), Positives = 97/206 (47%)
Query: 53 LALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAG 112
LA ++V F+TA + + RA E + + T K D+ L GG+ G +TE+ G
Sbjct: 85 LAEAKKLVFMGFRTATDINKARA--EII--QITTGSKEFDSLLDGGIESGSITEIFGEFR 140
Query: 113 TGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQ 172
TGKTQ C L + L GG +G +YID E TF R++ + E ++ G +
Sbjct: 141 TGKTQICHTLCVTCQLGYSQGGGEGRALYIDTEGTFRPERLLAIA-----ERYNLNG--E 193
Query: 173 EMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQR---APGQH 229
+ + + + E L + + +++ LL++DS AL + R A Q
Sbjct: 194 HVLDNVSYARAYNSDHQLELLVQASAMMSESRYALLIVDSATALYRTDYAGRGELADRQK 253
Query: 230 PLSWHISLITSLAEFSRIPIVVTNQV 255
L+ + + LA+ + +V+TNQV
Sbjct: 254 HLARFLRTLQRLADEFGVAVVITNQV 279
>DICTYBASE|DDB_G0273139 [details] [associations]
symbol:rad51-1 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 171 (65.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 58/206 (28%), Positives = 97/206 (47%)
Query: 53 LALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAG 112
LA ++V F+TA + + RA E + + T K D+ L GG+ G +TE+ G
Sbjct: 85 LAEAKKLVFMGFRTATDINKARA--EII--QITTGSKEFDSLLDGGIESGSITEIFGEFR 140
Query: 113 TGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQ 172
TGKTQ C L + L GG +G +YID E TF R++ + E ++ G +
Sbjct: 141 TGKTQICHTLCVTCQLGYSQGGGEGRALYIDTEGTFRPERLLAIA-----ERYNLNG--E 193
Query: 173 EMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQR---APGQH 229
+ + + + E L + + +++ LL++DS AL + R A Q
Sbjct: 194 HVLDNVSYARAYNSDHQLELLVQASAMMSESRYALLIVDSATALYRTDYAGRGELADRQK 253
Query: 230 PLSWHISLITSLAEFSRIPIVVTNQV 255
L+ + + LA+ + +V+TNQV
Sbjct: 254 HLARFLRTLQRLADEFGVAVVITNQV 279
>TAIR|locus:2147092 [details] [associations]
symbol:RAD51 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010332 "response to gamma radiation" evidence=IEP;RCA]
[GO:0006302 "double-strand break repair" evidence=RCA;IMP]
[GO:0006259 "DNA metabolic process" evidence=IDA;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0009555
"pollen development" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA] [GO:0045003
"double-strand break repair via synthesis-dependent strand
annealing" evidence=IDA] [GO:0009314 "response to radiation"
evidence=NAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163
SMART:SM00278 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0003684
GO:GO:0010332 EMBL:AF296834 GO:GO:0045003 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K04482 EMBL:U43652 EMBL:AJ001100 EMBL:U43528
IPI:IPI00532326 RefSeq:NP_568402.1 UniGene:At.110
ProteinModelPortal:P94102 SMR:P94102 DIP:DIP-31780N IntAct:P94102
STRING:P94102 EnsemblPlants:AT5G20850.1 GeneID:832208
KEGG:ath:AT5G20850 GeneFarm:4757 TAIR:At5g20850 InParanoid:P94102
OMA:MMAESRY PhylomeDB:P94102 ProtClustDB:PLN03186
Genevestigator:P94102 GermOnline:AT5G20850 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 Uniprot:P94102
Length = 342
Score = 169 (64.5 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 47 SEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTE 106
++V + S++V F +A L QR E + + + + LD L GG+ G +TE
Sbjct: 72 AKVDKIVEAASKLVPLGFTSASQLHAQRQ--EII--QITSGSRELDKVLEGGIETGSITE 127
Query: 107 LVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFH 166
L G +GKTQ C L + LP GG +G +YID E TF +R++++ + F
Sbjct: 128 LYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIA-----DRFG 182
Query: 167 SKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PGVHE 222
G ++ + + + + L + +++ + LL++DS AL G E
Sbjct: 183 LNGA--DVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGE 240
Query: 223 QRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLY 266
A H L+ + + LA+ + +V+TNQV Q D S L+
Sbjct: 241 LSARQMH-LAKFLRSLQKLADEFGVAVVITNQVVAQV-DGSALF 282
>FB|FBgn0003482 [details] [associations]
symbol:spn-D "spindle D" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IGI] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0009951 "polarity
specification of dorsal/ventral axis" evidence=IMP] [GO:0030720
"oocyte localization involved in germarium-derived egg chamber
formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=TAS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IMP] [GO:0046843 "dorsal appendage formation"
evidence=IMP] InterPro:IPR020588 PROSITE:PS50162 EMBL:AE014297
GO:GO:0005524 GO:GO:0009949 GO:GO:0007294 GO:GO:0003677
GO:GO:0006200 GO:GO:0008298 GO:GO:0046843 GO:GO:0031023
GO:GO:0030720 GO:GO:0030717 GO:GO:0007131 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
KO:K10870 GO:GO:0009951 HSSP:Q06609 EMBL:AY071162 EMBL:AY257540
RefSeq:NP_733200.1 UniGene:Dm.6085 SMR:Q8SZ30 STRING:Q8SZ30
EnsemblMetazoa:FBtr0085116 GeneID:318579 KEGG:dme:Dmel_CG31069
UCSC:CG31069-RA CTD:318579 FlyBase:FBgn0003482 InParanoid:Q8SZ30
OMA:CLNVQIP OrthoDB:EOG4MKKZ1 GenomeRNAi:318579 NextBio:845512
Uniprot:Q8SZ30
Length = 270
Score = 165 (63.1 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/131 (31%), Positives = 67/131 (51%)
Query: 86 TRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVE 145
T K LD GG+ G + EL+G +GTGKTQ CL+L L +P GGL+G ++ID
Sbjct: 48 TGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTR 107
Query: 146 STFTSRRMIEMGASSFPEIFHS--KGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN 203
F R++ + + H + A +M +I ++ L + ++ L+ +
Sbjct: 108 QDFHPDRLMGLALKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHRHLVDH 167
Query: 204 -QVKLLVIDSM 213
+KL+VIDS+
Sbjct: 168 PDIKLIVIDSL 178
>UNIPROTKB|E9PNT5 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR011941
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00278 GO:GO:0005524
GO:GO:0003684 GO:GO:0006281 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51 IPI:IPI00980924
ProteinModelPortal:E9PNT5 SMR:E9PNT5 Ensembl:ENST00000527860
UCSC:uc001zmn.1 ArrayExpress:E9PNT5 Bgee:E9PNT5 Uniprot:E9PNT5
Length = 172
Score = 149 (57.5 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 46 LSEVRS--ALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGV 103
+SE ++ LA +++V F TA ++R+ E + + T K LD L GG+ G
Sbjct: 66 ISEAKADKILAEAAKLVPMGFTTATEFHQRRS--EII--QITTGSKELDKLLQGGIETGS 121
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMI 154
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++
Sbjct: 122 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLL 172
>SGD|S000000897 [details] [associations]
symbol:RAD51 "Strand exchange protein" species:4932
"Saccharomyces cerevisiae" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IMP] [GO:0045002 "double-strand break
repair via single-strand annealing" evidence=IMP] [GO:0030491
"heteroduplex formation" evidence=IDA] [GO:0000709 "meiotic joint
molecule formation" evidence=IMP] [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0042148 "strand invasion" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
SGD:S000000897 GO:GO:0005524 GO:GO:0003684 EMBL:BK006939
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 EMBL:U18839 GO:GO:0000722
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0000709 RefSeq:NP_011021.3
GeneID:856831 KEGG:sce:YER095W KO:K04482 EMBL:M88470
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z GO:GO:0042148 EMBL:X64270
EMBL:D10023 PIR:A44348 RefSeq:NP_011026.3 PDB:1SZP PDB:3LDA
PDBsum:1SZP PDBsum:3LDA ProteinModelPortal:P25454 SMR:P25454
DIP:DIP-195N IntAct:P25454 MINT:MINT-386096 STRING:P25454
PaxDb:P25454 PeptideAtlas:P25454 EnsemblFungi:YER095W GeneID:856837
KEGG:sce:YER100W CYGD:YER095w KO:K04554 EvolutionaryTrace:P25454
NextBio:983130 Genevestigator:P25454 GermOnline:YER095W
GO:GO:0030491 Uniprot:P25454
Length = 400
Score = 169 (64.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 56/180 (31%), Positives = 85/180 (47%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
L T K LD L GGV G +TEL G TGK+Q C L++ +P GG +G +YID
Sbjct: 160 LTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYID 219
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQEMA-GRILVLQPTSLSEFTESLEKIKVSLLQ 202
E TF R++ + A F G+ + A + + + L+ + +
Sbjct: 220 TEGTFRPVRLVSI-AQRF-------GLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSE 271
Query: 203 NQVKLLVIDSMEALV----PGVHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
++ L+V+DS+ AL G E A H L+ + + LA+ + +VVTNQV Q
Sbjct: 272 SRFSLIVVDSVMALYRTDFSGRGELSARQMH-LAKFMRALQRLADQFGVAVVVTNQVVAQ 330
>UNIPROTKB|F1N1D2 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:DAAA02014664 IPI:IPI00691200 Ensembl:ENSBTAT00000007794
Uniprot:F1N1D2
Length = 339
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 62/218 (28%), Positives = 102/218 (46%)
Query: 43 DVELSEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFG 102
+ ++ +++ A ++++ P F TA E+R H+ T + D L GG+
Sbjct: 67 EAKVDKIKEA---ANKLIEPGFLTAFEYSEKRKMVFHI----TTGSQEFDKLLGGGIESM 119
Query: 103 VVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFP 162
+TE G TGKTQ L + A LP GG GG+I+ID E+TF R+ ++ A F
Sbjct: 120 AITEAFGEFRTGKTQLSHTLCVTAQLPGA-GGYSGGIIFIDTENTFRPDRLRDI-ADRF- 176
Query: 163 EIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQ--VKLLVIDSMEALVPGV 220
+ H+ + + R TS + E L+ + + KLL+IDS+ AL
Sbjct: 177 NVDHNAVLDNVLYARAY----TSEHQM-ELLDYVAAKFHEEAGIFKLLIIDSIMALFRVD 231
Query: 221 HEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
R A Q L+ +S + ++E + + VTNQ+
Sbjct: 232 FSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 269
>DICTYBASE|DDB_G0284507 [details] [associations]
symbol:DDB_G0284507 "putative Rad51C protein"
species:44689 "Dictyostelium discoideum" [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
dictyBase:DDB_G0284507 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
EMBL:AAFI02000066 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
RefSeq:XP_638535.1 HSSP:Q55075 ProteinModelPortal:Q54PJ7
EnsemblProtists:DDB0232315 GeneID:8624628 KEGG:ddi:DDB_G0284507
InParanoid:Q54PJ7 KO:K10870 OMA:VREMATH Uniprot:Q54PJ7
Length = 381
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 70/261 (26%), Positives = 112/261 (42%)
Query: 91 LDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTS 150
+D L GG P +TE+ G G GKT +L + ++P GG+ G IYID E +++
Sbjct: 71 IDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYIDTEGSYSC 130
Query: 151 RRMIEMGA---SSFPEIFHSKGMAQE--------MAGRILVLQPTSLSEFTESLEKIKVS 199
+R+ EM + + M Q + I + E + ++ +
Sbjct: 131 QRVREMATHLVNHLECVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYIEIISLIHQLPLF 190
Query: 200 LLQNQ-VKLLVIDSMEALVPGVHEQRAPGQHPLSWHISLITSLAEFS---RIPIVVTNQV 255
L +N+ VKL+V+DS+ P + + G S +SL +L + + +VV NQV
Sbjct: 191 LEKNKDVKLIVVDSIT--YPFRCDFKDMGLRTRSL-LSLAQNLMNIATRYNLAVVVMNQV 247
Query: 256 RPQSHDESCLYPFQVQKMDRILKDRTRYYSHIVAVLGFHWAHAVTIRLVLEAKSGQRFMN 315
+ + P Q + + +V LG W H T R+VL K QRF +
Sbjct: 248 TTK------ISPNQKESI-------------LVPYLGESWTHICTYRMVLFWKQKQRFCH 288
Query: 316 VEKSPTSPPLAFSFTINPSGI 336
+ KSP+ F I GI
Sbjct: 289 LYKSPSFKSCFTPFDIVEYGI 309
>ASPGD|ASPL0000051939 [details] [associations]
symbol:AN10145 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0033062 "Rhp55-Rhp57 complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=IEA]
[GO:0030491 "heteroduplex formation" evidence=IEA] [GO:0000707
"meiotic DNA recombinase assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 ProteinModelPortal:C8VTV7
EnsemblFungi:CADANIAT00001591 OMA:ILSINAM Uniprot:C8VTV7
Length = 554
Score = 164 (62.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 61/198 (30%), Positives = 92/198 (46%)
Query: 91 LDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTS 150
LD L GG+ G VTE+ G +G+GKTQF L L L LP G IYI E+ +
Sbjct: 112 LDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQGA-GRSAIYISTEAPLAT 170
Query: 151 RRMIEMGASSFPEIFH-SKGMAQEMAGRILVLQPTSLSEFTESLE-KIKVSLLQNQVKLL 208
R+ ++ P + S+ A + GRIL + L L ++ V++ + V L+
Sbjct: 171 NRLSQL-IECHPYLSTLSREQAPSL-GRILSINAMDLESQDHILNYQLPVAIKRYNVGLV 228
Query: 209 VIDSMEALVPGVHEQR-APGQHPLSWHIS----LITSLAEFSRIPIVVTNQVRPQSHDES 263
VIDS+ + H G S ++ ++ +LA + IVV NQV + ++
Sbjct: 229 VIDSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLAASEDVAIVVANQVSDRFEGDA 288
Query: 264 CLYPFQVQKMDRILKDRT 281
L PF R+ DRT
Sbjct: 289 PL-PFS-----RVTGDRT 300
>RGD|1563603 [details] [associations]
symbol:Rad51 "RAD51 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISO] [GO:0000793 "condensed
chromosome" evidence=ISO] [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0000800 "lateral element"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 RGD:1563603
GO:GO:0005524 GO:GO:0005634 GO:GO:0042493 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 IPI:IPI00948014 Ensembl:ENSRNOT00000068607
UCSC:RGD:1563603 ArrayExpress:F1LZR2 Uniprot:F1LZR2
Length = 236
Score = 152 (58.6 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 104 VTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPE 163
+TE+ G TGKTQ C L++ LP GG +G +YID E TF R++ + E
Sbjct: 1 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA-----E 55
Query: 164 IFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALV----PG 219
+ G ++ + + + T+ L + +++++ LL++DS AL G
Sbjct: 56 RYGLSG--SDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSG 113
Query: 220 VHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQ 258
E A H L+ + ++ LA+ + +V+TNQV Q
Sbjct: 114 RGELSARQMH-LARFLRMLLRLADEFGVAVVITNQVVAQ 151
>UNIPROTKB|O75771 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 EMBL:CH471147
GO:GO:0007131 Orphanet:145 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 EMBL:AC022916 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OMA:QARTQDE
OrthoDB:EOG4K0QP3 EMBL:Y15572 EMBL:AF034956 EMBL:AB013341
EMBL:AB016223 EMBL:AB016224 EMBL:AB016225 EMBL:AB018360
EMBL:AB018361 EMBL:AB018362 EMBL:AB018363 EMBL:AB020412
EMBL:AY623116 EMBL:AK296241 EMBL:BC014422 EMBL:AL117459
IPI:IPI00216381 IPI:IPI00216382 IPI:IPI00216383 IPI:IPI00216384
IPI:IPI00216386 IPI:IPI00291454 IPI:IPI00411326 IPI:IPI00791891
PIR:T17247 RefSeq:NP_001136043.1 RefSeq:NP_002869.3
RefSeq:NP_598332.1 UniGene:Hs.631757 PDB:2KZ3 PDBsum:2KZ3
ProteinModelPortal:O75771 SMR:O75771 DIP:DIP-24265N IntAct:O75771
MINT:MINT-127795 STRING:O75771 PhosphoSite:O75771 PRIDE:O75771
DNASU:5892 Ensembl:ENST00000335858 Ensembl:ENST00000345365
Ensembl:ENST00000357906 Ensembl:ENST00000360276
Ensembl:ENST00000394589 GeneID:5892 KEGG:hsa:5892 UCSC:uc002hir.2
UCSC:uc002his.2 GeneCards:GC17M033427 HGNC:HGNC:9823 MIM:602954
MIM:614291 neXtProt:NX_O75771 PharmGKB:PA34179 PhylomeDB:O75771
GenomeRNAi:5892 NextBio:22920 ArrayExpress:O75771 Bgee:O75771
Genevestigator:O75771 GermOnline:ENSG00000185379 Uniprot:O75771
Length = 328
Score = 155 (59.6 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 55/191 (28%), Positives = 96/191 (50%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
L T + LD L G+ G VTE+VG G+GKTQ CL +AA AH GL V+Y+D
Sbjct: 82 LSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL---CMAANVAH--GLQQNVLYVD 136
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN 203
T+ R++++ + + + A+ + RI V+ + + + L++++ ++ Q
Sbjct: 137 SNGGLTASRLLQLLQAKTQD---EEEQAEALR-RIQVVHAFDIFQMLDVLQELRGTVAQQ 192
Query: 204 ------QVKLLVIDSMEALV-PGVHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVR 256
VK++V+DS+ A+V P + Q+ G + + +LA + +VVTN +
Sbjct: 193 VTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHIT 252
Query: 257 PQSHDESCLYP 267
+ D L P
Sbjct: 253 -RDRDSGRLKP 262
Score = 39 (18.8 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 280 RTRYYSHIVAVLGFHWAHAVTIRLVLE------AKSGQRFMNVEKSPTSP 323
R R + LG W+ + R++L+ A G+R + KS P
Sbjct: 253 RDRDSGRLKPALGRSWSFVPSTRILLDTIEGAGASGGRRMACLAKSSRQP 302
>GENEDB_PFALCIPARUM|PF11_0087 [details] [associations]
symbol:PF11_0087 "Rad51 homolog, putative"
species:5833 "Plasmodium falciparum" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281
SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035 GenomeReviews:AE014186_GR
RefSeq:XP_001347762.2 ProteinModelPortal:Q8IIS8 SMR:Q8IIS8
EnsemblProtists:PF11_0087:mRNA GeneID:810638 KEGG:pfa:PF11_0087
EuPathDB:PlasmoDB:PF3D7_1107400 Uniprot:Q8IIS8
Length = 350
Score = 157 (60.3 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 50/173 (28%), Positives = 78/173 (45%)
Query: 86 TRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVE 145
T K LDA L GG+ G +TEL G TGK+Q C L++ LP G +G ++ID E
Sbjct: 114 TGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTE 173
Query: 146 STFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQV 205
TF R++ + A + H + I + + TE L + +
Sbjct: 174 GTFRPERIVAI-AKRYG--LHPT----DCLNNIAYAKAYNCDHQTELLIDASAMMADARF 226
Query: 206 KLLVIDSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
LL++DS AL + R A Q L + + +A+ + +++TNQV
Sbjct: 227 ALLIVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQV 279
>UNIPROTKB|Q8IIS8 [details] [associations]
symbol:Rad51 "Rad51 homolog" species:36329 "Plasmodium
falciparum 3D7" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
GO:GO:0006281 SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035
GenomeReviews:AE014186_GR RefSeq:XP_001347762.2
ProteinModelPortal:Q8IIS8 SMR:Q8IIS8 EnsemblProtists:PF11_0087:mRNA
GeneID:810638 KEGG:pfa:PF11_0087 EuPathDB:PlasmoDB:PF3D7_1107400
Uniprot:Q8IIS8
Length = 350
Score = 157 (60.3 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 50/173 (28%), Positives = 78/173 (45%)
Query: 86 TRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVE 145
T K LDA L GG+ G +TEL G TGK+Q C L++ LP G +G ++ID E
Sbjct: 114 TGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTE 173
Query: 146 STFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQV 205
TF R++ + A + H + I + + TE L + +
Sbjct: 174 GTFRPERIVAI-AKRYG--LHPT----DCLNNIAYAKAYNCDHQTELLIDASAMMADARF 226
Query: 206 KLLVIDSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
LL++DS AL + R A Q L + + +A+ + +++TNQV
Sbjct: 227 ALLIVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQV 279
>CGD|CAL0001214 [details] [associations]
symbol:RAD51 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030998 "linear
element" evidence=IEA] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IEA] [GO:0000150 "recombinase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006311 "meiotic gene conversion" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0042148 "strand
invasion" evidence=IEA] [GO:0000709 "meiotic joint molecule
formation" evidence=IEA] [GO:0030491 "heteroduplex formation"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0000711 "meiotic DNA repair synthesis" evidence=IEA]
[GO:0006200 "ATP catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
L T K LD L GGV G +TE+ G TGK+Q C L++ LP GG +G +YID
Sbjct: 119 LTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYID 178
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGM-AQEMAGRILVLQPTSLSEFTESLEKIKVSLL- 201
E TF R++ + A + G+ + + + + +E +L I ++
Sbjct: 179 TEGTFRPNRLVSI-AQRY-------GLNPNDCLDNVAYARAYN-AEHQLNLLNIAAEMMA 229
Query: 202 QNQVKLLVIDSMEALV----PGVHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRP 257
+++ LL++DS+ +L G E A H + +L EF I +V+TNQV
Sbjct: 230 ESRFSLLIVDSIMSLYRTDYAGRGELSARQTHVAKFMRTLQRLADEFG-IAVVITNQVVA 288
Query: 258 Q 258
Q
Sbjct: 289 Q 289
>UNIPROTKB|Q59UY8 [details] [associations]
symbol:RAD51 "Putative uncharacterized protein RAD51"
species:237561 "Candida albicans SC5314" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
L T K LD L GGV G +TE+ G TGK+Q C L++ LP GG +G +YID
Sbjct: 119 LTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYID 178
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGM-AQEMAGRILVLQPTSLSEFTESLEKIKVSLL- 201
E TF R++ + A + G+ + + + + +E +L I ++
Sbjct: 179 TEGTFRPNRLVSI-AQRY-------GLNPNDCLDNVAYARAYN-AEHQLNLLNIAAEMMA 229
Query: 202 QNQVKLLVIDSMEALV----PGVHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRP 257
+++ LL++DS+ +L G E A H + +L EF I +V+TNQV
Sbjct: 230 ESRFSLLIVDSIMSLYRTDYAGRGELSARQTHVAKFMRTLQRLADEFG-IAVVITNQVVA 288
Query: 258 Q 258
Q
Sbjct: 289 Q 289
>SGD|S000000981 [details] [associations]
symbol:DMC1 "Meiosis-specific protein required for repair of
double-strand breaks" species:4932 "Saccharomyces cerevisiae"
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0007126
"meiosis" evidence=IEA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 SGD:S000000981 GO:GO:0005524
GO:GO:0016887 GO:GO:0030435 EMBL:BK006939 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:U18922 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709 EMBL:M87549
EMBL:D10865 PIR:A38214 RefSeq:NP_011106.1 ProteinModelPortal:P25453
SMR:P25453 DIP:DIP-110N IntAct:P25453 MINT:MINT-387175
STRING:P25453 PeptideAtlas:P25453 EnsemblFungi:YER179W
GeneID:856926 KEGG:sce:YER179W CYGD:YER179w NextBio:983398
Genevestigator:P25453 GermOnline:YER179W Uniprot:P25453
Length = 334
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/217 (28%), Positives = 101/217 (46%)
Query: 43 DVELSEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFG 102
+V++ +++ A + ++ P T L + QR + L T K LD+ L GG+
Sbjct: 62 EVKVEKIKEAAGKIIQVGFIP-ATVQLDIRQRVYS------LSTGSKQLDSILGGGIMTM 114
Query: 103 VVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFP 162
+TE+ G GKTQ L + LP GG +G V YID E TF R+ ++ A +
Sbjct: 115 SITEVFGEFRCGKTQMSHTLCVTTQLPREMGGGEGKVAYIDTEGTFRPERIKQI-AEGY- 172
Query: 163 EIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHE 222
E+ +A R L S + E +E++ L +L+V+DS+ A +
Sbjct: 173 ELDPESCLANVSYARAL----NSEHQM-ELVEQLGEELSSGDYRLIVVDSIMANFRVDYC 227
Query: 223 QR---APGQHPLSWHISLITSLAEFSRIPIVVTNQVR 256
R + Q L+ H+ + LAE + + +TNQV+
Sbjct: 228 GRGELSERQQKLNQHLFKLNRLAEEFNVAVFLTNQVQ 264
>MGI|MGI:105393 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007129
"synapsis" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:105393 GO:GO:0005524 GO:GO:0005654
GO:GO:0007286 GO:GO:0006281 GO:GO:0016887 Reactome:REACT_120463
GO:GO:0003690 GO:GO:0003697 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 Reactome:REACT_27235
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:D58419 EMBL:D64107 IPI:IPI00126394 PIR:JC4191
RefSeq:NP_034189.1 UniGene:Mm.2524 ProteinModelPortal:Q61880
SMR:Q61880 STRING:Q61880 PhosphoSite:Q61880 PRIDE:Q61880
Ensembl:ENSMUST00000023065 GeneID:13404 KEGG:mmu:13404
GeneTree:ENSGT00550000075091 InParanoid:Q61880 NextBio:283799
Bgee:Q61880 Genevestigator:Q61880 GermOnline:ENSMUSG00000022429
GO:GO:0000150 Uniprot:Q61880
Length = 340
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 60/215 (27%), Positives = 97/215 (45%)
Query: 47 SEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTE 106
++V ++++ P F TA E+R H+ T + D L GG+ +TE
Sbjct: 68 AKVEKIKEAANKLIEPGFLTAFQYSERRKMVFHI----TTGSQEFDKLLGGGIESMAITE 123
Query: 107 LVGPAGTGKTQFCLKLSLLAALPAHYGGLDGG-VIYIDVESTFTSRRMIEMGASSFPEIF 165
G TGKTQ L + A LP GG GG +I+ID E+TF R+ ++ A F +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGT-GGYSGGKIIFIDTENTFRPDRLRDI-ADRF-NVD 180
Query: 166 HSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQ--VKLLVIDSMEALVPGVHEQ 223
H + + +L + + E L+ + + KLL+IDS+ AL
Sbjct: 181 H-----EAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSG 235
Query: 224 R---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
R A Q L+ +S + ++E + + VTNQ+
Sbjct: 236 RGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>UNIPROTKB|F1NI95 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0001541 "ovarian follicle development" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0000794 GO:GO:0000781 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:AADN02006146 IPI:IPI00578251 Ensembl:ENSGALT00000019979
Uniprot:F1NI95
Length = 346
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 61/218 (27%), Positives = 100/218 (45%)
Query: 43 DVELSEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFG 102
+V++ +++ A ++++ P F TA E+R H+ T + D L GG+
Sbjct: 73 EVKVDKIKEA---ANKLIEPGFLTAFEYSEKRKMVFHI----TTGSQEFDKLLGGGIESM 125
Query: 103 VVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFP 162
+TE G TGKTQ L + A LP G G +I+ID E+TF R+ ++ A F
Sbjct: 126 AITEAFGEFRTGKTQLSHTLCVTAQLPGPKGYTGGKIIFIDTENTFRPDRLRDI-ADRF- 183
Query: 163 EIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQ--VKLLVIDSMEALVPGV 220
+ H + + R TS + E L+ + + KLL+IDS+ AL
Sbjct: 184 NVDHDAVLDNVLYARAY----TSEHQM-ELLDYVAAKFHEEAGIFKLLIIDSIMALFRVD 238
Query: 221 HEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
R A Q L+ +S + ++E + + VTNQ+
Sbjct: 239 FSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 276
>UNIPROTKB|H7C1R0 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C1R0 Ensembl:ENST00000413590 Uniprot:H7C1R0
Length = 257
Score = 152 (58.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 65/269 (24%), Positives = 114/269 (42%)
Query: 106 ELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIF 165
E+ G G GKTQ C++L++ +P +GG+ G ++ID E +F R++++ + +
Sbjct: 2 EICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ 61
Query: 166 ----------HSKGMAQEMAGRILV-LQPTSLSEFTESLEKIKV--SLLQ--NQVKLLVI 210
H K + IL + ++TE L ++ + L ++V+L+++
Sbjct: 62 LIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIV 121
Query: 211 DSMEALVPGVHE--QRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYPF 268
D + P H+ + L+ + SLA R+ +++TNQ+
Sbjct: 122 DGIA--FPFRHDLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQM------------- 166
Query: 269 QVQKMDRILKDRTRYYSHIVAVLGFHWAHAVTIRLVLEAKSGQ-RFMNVEKSPTSPPLAF 327
K+DR + +V LG W HA TIRL+ Q R + KSP+
Sbjct: 167 -TTKIDR-------NQALLVPALGESWGHAATIRLIFHWDRKQSRLATLYKSPSQKECTV 218
Query: 328 SFTINPSGISLLTDDGTEMVVPETCNLSS 356
F I P G + VV C+L +
Sbjct: 219 LFQIKPQGFR-------DTVVTSACSLQT 240
>UNIPROTKB|G5EGG8 [details] [associations]
symbol:rad-51 "RecA/Rad51/Dmc1-like protein" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 EMBL:AF061201
EMBL:AB011382 PIR:T37305 RefSeq:NP_001023466.1 UniGene:Cel.19596
ProteinModelPortal:G5EGG8 SMR:G5EGG8 IntAct:G5EGG8
EnsemblMetazoa:Y43C5A.6b GeneID:177914 KEGG:cel:CELE_Y43C5A.6
CTD:177914 WormBase:Y43C5A.6b NextBio:898916 Uniprot:G5EGG8
Length = 357
Score = 156 (60.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 91 LDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTS 150
LD L GG+ G +TE+ G TGKTQ C L++L LP GG +G +YID +TF
Sbjct: 125 LDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRP 184
Query: 151 RRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVI 210
R+I + + H + I V + + + + + +++ ++++
Sbjct: 185 ERIIAIAQRYNMDSAH-------VLENIAVARAYNSEHLMALIIRAGAMMSESRYAVVIV 237
Query: 211 DSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYP 267
D A + R A Q LS + + LA+ + +++TNQV Q + ++
Sbjct: 238 DCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVDGGASMFQ 297
Query: 268 FQVQK 272
+K
Sbjct: 298 ADAKK 302
>POMBASE|SPAC8E11.03c [details] [associations]
symbol:dmc1 "RecA family ATPase Dmc1" species:4896
"Schizosaccharomyces pombe" [GO:0000150 "recombinase activity"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IMP]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 PomBase:SPAC8E11.03c
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0006281 GO:GO:0051260 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 EMBL:AB008545 EMBL:D64035
PIR:T39157 PIR:T51302 RefSeq:NP_594166.1 ProteinModelPortal:O42634
DIP:DIP-29236N IntAct:O42634 STRING:O42634
EnsemblFungi:SPAC8E11.03c.1 GeneID:2542106 KEGG:spo:SPAC8E11.03c
OrthoDB:EOG43XZC8 NextBio:20803178 GO:GO:0006311 GO:GO:0000709
Uniprot:O42634
Length = 332
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 56/203 (27%), Positives = 96/203 (47%)
Query: 60 VCPP-FQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQF 118
+CP F TA+ + + R + T + L+ L GG+ +TE+ G GKTQ
Sbjct: 74 MCPANFSTAMEISQNRKKVWSIS----TGSEALNGILGGGIQSMSITEVFGEFRCGKTQM 129
Query: 119 CLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGM-AQEMAGR 177
L + A LP GG +G V +ID E TF R+ + E F G+ A +
Sbjct: 130 SHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRI-----KAIAERF---GVDADQAMEN 181
Query: 178 ILVLQPTSLSEFTESLEKIKVSLLQN-QVKLLVIDSMEALVPGVHEQR---APGQHPLSW 233
I+V + + + E + K+ ++ Q +LL++DS+ AL + R + Q L+
Sbjct: 182 IIVSRAYNSEQQMEYITKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNI 241
Query: 234 HISLITSLAEFSRIPIVVTNQVR 256
++ + ++E + + VTNQV+
Sbjct: 242 MLARLNHISEEFNVAVFVTNQVQ 264
>ZFIN|ZDB-GENE-060331-93 [details] [associations]
symbol:dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
ZFIN:ZDB-GENE-060331-93 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:AB182999 IPI:IPI00832294 RefSeq:NP_001018618.1
UniGene:Dr.92382 ProteinModelPortal:Q50LF4 SMR:Q50LF4 STRING:Q50LF4
GeneID:553953 KEGG:dre:553953 InParanoid:Q50LF4 NextBio:20880545
Uniprot:Q50LF4
Length = 342
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/178 (30%), Positives = 81/178 (45%)
Query: 83 HLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYI 142
H+ T D L GGV +TE G TGKTQ L + A LP YG G VI+I
Sbjct: 102 HITTGSLEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFI 161
Query: 143 DVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQ 202
D E+TF R+ ++ A F + H + + +L + + E L+ + +
Sbjct: 162 DTENTFRPERLKDI-ADRF-NVDH-----EAVLDNVLYARAYTSEHQMELLDFVAAKFHE 214
Query: 203 NQ--VKLLVIDSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
KLL+IDS+ AL R A Q L+ +S + ++E + + VTNQ+
Sbjct: 215 EGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 272
>WB|WBGene00004297 [details] [associations]
symbol:rad-51 species:6239 "Caenorhabditis elegans"
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0009432 "SOS
response" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0033554 "cellular
response to stress" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IGI] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0043073 "germ cell nucleus" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0000150 "recombinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA
helicase binding" evidence=IPI] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 UniGene:Cel.19596
GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914 NextBio:898916
RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25 SMR:Q95Q25
DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974 STRING:Q95Q25
EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b WormBase:Y43C5A.6a
InParanoid:Q95Q25 ArrayExpress:Q95Q25 Uniprot:Q95Q25
Length = 395
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 91 LDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTS 150
LD L GG+ G +TE+ G TGKTQ C L++L LP GG +G +YID +TF
Sbjct: 163 LDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRP 222
Query: 151 RRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVI 210
R+I + + H + I V + + + + + +++ ++++
Sbjct: 223 ERIIAIAQRYNMDSAH-------VLENIAVARAYNSEHLMALIIRAGAMMSESRYAVVIV 275
Query: 211 DSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYP 267
D A + R A Q LS + + LA+ + +++TNQV Q + ++
Sbjct: 276 DCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVDGGASMFQ 335
Query: 268 FQVQK 272
+K
Sbjct: 336 ADAKK 340
>UNIPROTKB|Q95Q25 [details] [associations]
symbol:rad-51 "Protein RAD-51, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0035188 GO:GO:0043066 GO:GO:0042771
GO:GO:0003684 GO:GO:0006281 GO:GO:0003690 GO:GO:0000794
GO:GO:0045132 SUPFAM:SSF47794 GO:GO:0008094 GO:GO:0010032
GO:GO:0043073 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838
UniGene:Cel.19596 GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914
NextBio:898916 RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25
SMR:Q95Q25 DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974
STRING:Q95Q25 EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b
WormBase:Y43C5A.6a InParanoid:Q95Q25 ArrayExpress:Q95Q25
Uniprot:Q95Q25
Length = 395
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 91 LDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTS 150
LD L GG+ G +TE+ G TGKTQ C L++L LP GG +G +YID +TF
Sbjct: 163 LDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRP 222
Query: 151 RRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVI 210
R+I + + H + I V + + + + + +++ ++++
Sbjct: 223 ERIIAIAQRYNMDSAH-------VLENIAVARAYNSEHLMALIIRAGAMMSESRYAVVIV 275
Query: 211 DSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQVRPQSHDESCLYP 267
D A + R A Q LS + + LA+ + +++TNQV Q + ++
Sbjct: 276 DCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVDGGASMFQ 335
Query: 268 FQVQK 272
+K
Sbjct: 336 ADAKK 340
>UNIPROTKB|E1BVK2 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00550000074609 KO:K10871 CTD:5892 OMA:QARTQDE
EMBL:AADN02025945 IPI:IPI00597433 RefSeq:NP_001185575.1
UniGene:Gga.9680 ProteinModelPortal:E1BVK2
Ensembl:ENSGALT00000003463 GeneID:417528 KEGG:gga:417528
NextBio:20820813 Uniprot:E1BVK2
Length = 327
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 69/258 (26%), Positives = 114/258 (44%)
Query: 11 LPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSE-VRSALALVSEIVCPPFQTALL 69
L + + + A NI T D + V L+++ P A L
Sbjct: 12 LTEEMIQLLRANNIRTVVDFVSSDLEDVAQSCSLSYKALVAVRRVLLAQFSAFPTNGADL 71
Query: 70 LMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALP 129
E +++T LPT LD L G+ G VTEL G G+GKTQ CL ++ +L
Sbjct: 72 YEELKSST----AILPTGNPSLDQLLDAGLYTGEVTELAGAPGSGKTQVCLSIAASVSL- 126
Query: 130 AHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEF 189
GL V ++D FT+ R+ +M + + K E R+ V++ + E
Sbjct: 127 ----GLRQHVFFLDSTGGFTASRLYQMLQARVED----KEEQLEALQRVQVVRMFDIYEM 178
Query: 190 TESLEKIKVSLLQN------QVKLLVIDSMEALV-PGVHEQRAPGQHPLSWHISLITSLA 242
+L +++ L Q +K ++IDS+ A++ P + +++ G + + +LA
Sbjct: 179 LRALHEVRDCLSQQVESSAGPLKAVLIDSVSAVLSPLLGGRQSEGLAIMMQLARELKTLA 238
Query: 243 -EFSRIPIVVTNQVRPQS 259
EFS + +VVTNQV S
Sbjct: 239 KEFS-VAVVVTNQVTRDS 255
>UNIPROTKB|E2RK50 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:AAEX03007314 RefSeq:XP_849984.1
ProteinModelPortal:E2RK50 Ensembl:ENSCAFT00000002150 GeneID:608268
KEGG:cfa:608268 NextBio:20893933 Uniprot:E2RK50
Length = 340
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 62/219 (28%), Positives = 101/219 (46%)
Query: 43 DVELSEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFG 102
+ ++ +++ A ++++ P F TA E+R H+ T + D L GG+
Sbjct: 67 EAKVDKIKEA---ANKLIEPGFLTAFEYSEKRKMVFHI----TTGSQEFDKLLGGGIESM 119
Query: 103 VVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGG-VIYIDVESTFTSRRMIEMGASSF 161
+TE G TGKTQ L + A LP GG GG +I+ID E+TF R+ ++ A F
Sbjct: 120 AITEAFGEFRTGKTQLSHTLCVTAQLPGA-GGYSGGKIIFIDTENTFRPDRLRDI-ADRF 177
Query: 162 PEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQ--VKLLVIDSMEALVPG 219
+ H + + R TS + E L+ + + KLL+IDS+ AL
Sbjct: 178 -NVDHDAVLDNVLYARAY----TSEHQM-ELLDYVAAKFHEEAGIFKLLIIDSIMALFRV 231
Query: 220 VHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
R A Q L+ +S + ++E + + VTNQ+
Sbjct: 232 DFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>UNIPROTKB|F1SKQ1 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:FP102457 RefSeq:XP_003126070.1
Ensembl:ENSSSCT00000000109 GeneID:100522866 KEGG:ssc:100522866
Uniprot:F1SKQ1
Length = 340
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 62/219 (28%), Positives = 101/219 (46%)
Query: 43 DVELSEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFG 102
+ ++ +++ A ++++ P F TA E+R H+ T + D L GG+
Sbjct: 67 EAKVDKIKEA---ANKLIEPGFLTAFEYSEKRKMVFHI----TTGSQEFDKLLGGGIESM 119
Query: 103 VVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGG-VIYIDVESTFTSRRMIEMGASSF 161
+TE G TGKTQ L + A LP GG GG +I+ID E+TF R+ ++ A F
Sbjct: 120 AITEAFGEFRTGKTQLSHTLCVTAQLPGA-GGYSGGKIIFIDTENTFRPDRLRDI-ADRF 177
Query: 162 PEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQ--VKLLVIDSMEALVPG 219
+ H + + R TS + E L+ + + KLL+IDS+ AL
Sbjct: 178 -NVDHDAVLDNVLYARAY----TSEHQM-ELLDYVAAKFHEEAGIFKLLIIDSIMALFRV 231
Query: 220 VHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
R A Q L+ +S + ++E + + VTNQ+
Sbjct: 232 DFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>UNIPROTKB|Q9DGC3 [details] [associations]
symbol:Dmc1 "DMC1" species:8330 "Cynops pyrrhogaster"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 HSSP:Q06609 EMBL:AB041944
ProteinModelPortal:Q9DGC3 SMR:Q9DGC3 Uniprot:Q9DGC3
Length = 342
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 62/218 (28%), Positives = 100/218 (45%)
Query: 43 DVELSEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFG 102
+ ++ +++ A V++++ P F TA E+R H+ T + D L GG+
Sbjct: 69 EAKVDKIKEA---VNKLIEPGFLTAFEYSEKRKMVFHI----TTGSQEFDKLLGGGIESM 121
Query: 103 VVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFP 162
+TE G TGKTQ L + A LP G G VI+ID E+TF R+ ++ A F
Sbjct: 122 AITETFGEFRTGKTQLSHTLCVTAQLPGTDGYTGGKVIFIDTENTFRPDRLRDI-ADRF- 179
Query: 163 EIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQ--VKLLVIDSMEALVPGV 220
+ H + + R TS + E L+ + + KLLVIDS+ AL
Sbjct: 180 SVDHDAVLDNVLYARAY----TSEHQM-ELLDYVAAKFHEEAGIFKLLVIDSIMALFRVD 234
Query: 221 HEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
R A Q L+ ++ + ++E + + VTNQ+
Sbjct: 235 FSGRGELAERQQKLAQMLARLQKISEEYNVAVFVTNQM 272
>UNIPROTKB|E2RP02 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 CTD:5892 OMA:QARTQDE EMBL:AAEX03006625 RefSeq:XP_548263.2
Ensembl:ENSCAFT00000029092 GeneID:491143 KEGG:cfa:491143
NextBio:20864025 Uniprot:E2RP02
Length = 328
Score = 151 (58.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 57/191 (29%), Positives = 94/191 (49%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
L T + LD L G+ G VTE+VG G+GKTQ CL +AA A+ GL V+YID
Sbjct: 82 LSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL---CVAANVAY--GLQQNVVYID 136
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN 203
T+ R++++ + P+ G Q RI V++ + + + L+ + +L Q
Sbjct: 137 SNGGLTASRILQLLQARTPDEEVQAGALQ----RIQVVRAFDIFQMLDVLQDCRGTLSQQ 192
Query: 204 ------QVKLLVIDSMEALV-PGVHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQVR 256
VK++++DS+ A+V P + Q+ G + + +LA + +VVTN +
Sbjct: 193 VSSASGTVKVVIVDSVTAVVSPLLGGQQREGLALMMQLARELKTLARDLGMAVVVTNHMT 252
Query: 257 PQSHDESCLYP 267
+ D L P
Sbjct: 253 -RDRDSGELKP 262
Score = 40 (19.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 280 RTRYYSHIVAVLGFHWAHAVTIRLVLEAKSGQR 312
R R + LG W+ + R++L+ G R
Sbjct: 253 RDRDSGELKPALGRSWSFVPSTRILLDIDEGAR 285
>UNIPROTKB|Q14565 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005694 "chromosome" evidence=ISS] [GO:0007126
"meiosis" evidence=TAS] [GO:0007292 "female gamete generation"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0007286
GO:GO:0003677 GO:GO:0007283 Reactome:REACT_111183 GO:GO:0001541
GO:GO:0000794 GO:GO:0001556 GO:GO:0000781 GO:GO:0007292
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:D63882 EMBL:D64108
EMBL:CR456486 EMBL:AK292617 EMBL:AY520538 EMBL:AL022320
EMBL:BC125163 EMBL:BC125164 IPI:IPI00031512 PIR:S62354
RefSeq:NP_008999.2 UniGene:Hs.339396 PDB:1V5W PDB:2ZJB PDBsum:1V5W
PDBsum:2ZJB ProteinModelPortal:Q14565 SMR:Q14565 DIP:DIP-24192N
IntAct:Q14565 MINT:MINT-3029876 STRING:Q14565 PhosphoSite:Q14565
DMDM:13878923 PaxDb:Q14565 PRIDE:Q14565 DNASU:11144
Ensembl:ENST00000216024 GeneID:11144 KEGG:hsa:11144 UCSC:uc003avz.1
CTD:11144 GeneCards:GC22M038914 HGNC:HGNC:2927 HPA:CAB015397
HPA:HPA001232 MIM:602721 neXtProt:NX_Q14565 PharmGKB:PA27377
HOVERGEN:HBG001504 InParanoid:Q14565 OrthoDB:EOG4F7NKC
PhylomeDB:Q14565 EvolutionaryTrace:Q14565 GenomeRNAi:11144
NextBio:42364 ArrayExpress:Q14565 Bgee:Q14565 CleanEx:HS_DMC1
Genevestigator:Q14565 GermOnline:ENSG00000100206 Uniprot:Q14565
Length = 340
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 62/219 (28%), Positives = 101/219 (46%)
Query: 43 DVELSEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFG 102
+ ++ +++ A ++++ P F TA E+R H+ T + D L GG+
Sbjct: 67 EAKVDKIKEA---ANKLIEPGFLTAFEYSEKRKMVFHI----TTGSQEFDKLLGGGIESM 119
Query: 103 VVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGG-VIYIDVESTFTSRRMIEMGASSF 161
+TE G TGKTQ L + A LP GG GG +I+ID E+TF R+ ++ A F
Sbjct: 120 AITEAFGEFRTGKTQLSHTLCVTAQLPGA-GGYPGGKIIFIDTENTFRPDRLRDI-ADRF 177
Query: 162 PEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQ--VKLLVIDSMEALVPG 219
+ H + + R TS + E L+ + + KLL+IDS+ AL
Sbjct: 178 -NVDHDAVLDNVLYARAY----TSEHQM-ELLDYVAAKFHEEAGIFKLLIIDSIMALFRV 231
Query: 220 VHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
R A Q L+ +S + ++E + + VTNQ+
Sbjct: 232 DFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>TAIR|locus:2084558 [details] [associations]
symbol:DMC1 "DISRUPTION OF MEIOTIC CONTROL 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA;IDA] [GO:0006281
"DNA repair" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051026 "chiasma assembly" evidence=IGI;IMP] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA;TAS] [GO:0010212 "response to ionizing radiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0006259 EMBL:AP001300 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0000733 GO:GO:0008094 GO:GO:0051026 EMBL:D45415 EMBL:U76670
EMBL:BT023447 IPI:IPI00517160 PIR:JC4092 RefSeq:NP_188928.2
UniGene:At.50216 ProteinModelPortal:Q39009 SMR:Q39009 IntAct:Q39009
MINT:MINT-5222993 STRING:Q39009 EnsemblPlants:AT3G22880.1
GeneID:821860 KEGG:ath:AT3G22880 GeneFarm:4784 TAIR:At3g22880
eggNOG:COG0468 HOGENOM:HOG000227426 InParanoid:Q39009 KO:K10872
OMA:FFQDIDL PhylomeDB:Q39009 ProtClustDB:PLN03187
Genevestigator:Q39009 GermOnline:AT3G22880 GO:GO:0000707
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 Uniprot:Q39009
Length = 344
Score = 135 (52.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 48/176 (27%), Positives = 78/176 (44%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
+ T + LD L GG+ +TE G +GKTQ L + LP + G +G V YID
Sbjct: 108 ITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYID 167
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQ-EMAGRILVLQPTSLSEFTESLEKIKVSLLQ 202
E TF R++ + A F GM + I+ + + L + + +
Sbjct: 168 TEGTFRPDRIVPI-AERF-------GMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE 219
Query: 203 NQVKLLVIDSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
++L++DS+ AL R A Q L+ +S + +AE + + +TNQV
Sbjct: 220 EPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQV 275
Score = 57 (25.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 296 AHAVTIRLVL-EAKSGQRFMNVEKSPTSPPLAFSFTINPSGIS 337
AHA TIRL+ + K R V +P SF I GI+
Sbjct: 298 AHAATIRLLFRKGKGDTRVCKVYDAPNLAEAEASFQITQGGIA 340
>UNIPROTKB|Q74ZU7 [details] [associations]
symbol:AGR101C "AGR101Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0006281 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:AE016820 GenomeReviews:AE016820_GR
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 GO:GO:0000709 RefSeq:NP_986767.1 HSSP:Q06609
ProteinModelPortal:Q74ZU7 STRING:Q74ZU7 EnsemblFungi:AAS54591
GeneID:4623069 KEGG:ago:AGOS_AGR101C PhylomeDB:Q74ZU7
Uniprot:Q74ZU7
Length = 333
Score = 151 (58.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 53/176 (30%), Positives = 82/176 (46%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
+ T K LD+ L GGV +TE+ G GKTQ L + A LP GG +G V YID
Sbjct: 95 ISTGSKQLDSILGGGVMTMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGGEGKVAYID 154
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN 203
E TF R+ ++ A ++ + R L S + E +E++ L
Sbjct: 155 TEGTFRPERIKQIAARY--DLDPDACLENVSYARAL----NSEHQM-ELVEQLGQELASG 207
Query: 204 QVKLLVIDSMEALVPGVHEQRAP---GQHPLSWHISLITSLAEFSRIPIVVTNQVR 256
+LL++DS+ A + R Q L+ H+S + +AE + + +TNQV+
Sbjct: 208 DYRLLIVDSIMANFRVDYCGRGELNERQQKLNQHLSRLNRVAEEYNVAVFMTNQVQ 263
>UNIPROTKB|Q4WAR2 [details] [associations]
symbol:AFUA_7G02200 "Meiotic recombination protein (Dmc1),
putative" species:330879 "Aspergillus fumigatus Af293" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 KO:K10872 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AAHF01000015 RefSeq:XP_746712.1 ProteinModelPortal:Q4WAR2
STRING:Q4WAR2 EnsemblFungi:CADAFUAT00001154 GeneID:3504290
KEGG:afm:AFUA_7G02200 OMA:HAASTRI Uniprot:Q4WAR2
Length = 338
Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 57/196 (29%), Positives = 84/196 (42%)
Query: 64 FQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLS 123
F TA+ L QR + T K D+ L GG ++E+ G GKTQ +S
Sbjct: 83 FITAMELSHQRKRVVKIS----TGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMS 138
Query: 124 LLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQP 183
++A LP GG DG V YID E TF R+ ++ A F AQE L
Sbjct: 139 VVAQLPKEMGGADGKVAYIDTEGTFRPERIAQI-AERFSV---DPDSAQENIAYARALNS 194
Query: 184 TSLSEFTESLEKIKVSLLQNQVKLLVIDS-MEALVPGV--HEQRAPGQHPLSWHISLITS 240
E +L + + +LL+IDS M + A Q L+ + +
Sbjct: 195 EHQLELLNTLSR---EFAGGEYRLLIIDSIMNCFRVDYCGRGELADRQQKLNQFLMRLAH 251
Query: 241 LAEFSRIPIVVTNQVR 256
+AE + +++TNQV+
Sbjct: 252 MAEEFNVCVLMTNQVQ 267
>RGD|1307611 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:10116
"Rattus norvegicus" [GO:0000239 "pachytene" evidence=IEA;ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA;ISO]
[GO:0001541 "ovarian follicle development" evidence=IEA;ISO]
[GO:0001556 "oocyte maturation" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007276 "gamete generation" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0007286 "spermatid development"
evidence=IEA;ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 RGD:1307611 GO:GO:0005524 GO:GO:0007286 GO:GO:0003677
GO:GO:0006281 GO:GO:0001541 GO:GO:0000794 GO:GO:0001556
GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141
GO:GO:0000239 EMBL:CH473950 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 OrthoDB:EOG4F7NKC
GeneTree:ENSGT00550000075091 IPI:IPI00366298 RefSeq:NP_001124039.1
UniGene:Rn.45495 Ensembl:ENSRNOT00000018526 GeneID:362960
KEGG:rno:362960 UCSC:RGD:1307611 NextBio:681931 Uniprot:D3ZJ85
Length = 340
Score = 150 (57.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 59/214 (27%), Positives = 95/214 (44%)
Query: 47 SEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTE 106
++V ++++ P F TA E+R H+ T + D L GG+ +TE
Sbjct: 68 AKVEKIKEAANKLIEPGFLTAFQYSEKRKMVFHI----TTGSQEFDKLLGGGIESMAITE 123
Query: 107 LVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFH 166
G TGKTQ L + A LP G G +I+ID E+TF R+ ++ A F + H
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGADGYSGGKIIFIDTENTFRPDRLRDI-ADRF-NVDH 181
Query: 167 SKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQ--VKLLVIDSMEALVPGVHEQR 224
+ + R TS + E L+ + + KLL++DS+ AL R
Sbjct: 182 DAVLDNVLYARAY----TSEHQM-ELLDYVAAKFHEEAGIFKLLIVDSIMALFRVDFSGR 236
Query: 225 ---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
A Q L+ +S + ++E + + VTNQ+
Sbjct: 237 GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>RGD|1306944 [details] [associations]
symbol:Rad51d "RAD51 homolog D (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306944
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423 UniGene:Rn.206266
IPI:IPI00782474 Ensembl:ENSRNOT00000055971 Uniprot:D4A2C5
Length = 233
Score = 142 (55.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 58/229 (25%), Positives = 100/229 (43%)
Query: 11 LPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSE-VRSALALVSEIVCPPFQTALL 69
L + I + R I T D + V L+++ P A L
Sbjct: 12 LTEEIVQLLRGRKIKTVADLAAADLEEVAQKCGLSYKALVALRRVLLAQFSAFPLNGADL 71
Query: 70 LMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALP 129
E + +T L T + LD L G+ G +TE+VG G+GKTQ CL +AA
Sbjct: 72 YEELKTSTAILS----TGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVCL---CVAANV 124
Query: 130 AHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEF 189
AH L V+Y+D T+ R++++ + + + A + RI V+ + +
Sbjct: 125 AH--SLQQNVLYVDSNGGMTASRLLQLLQARTQD---EEKQASALQ-RIQVVHSFDIFQM 178
Query: 190 TESLEKIKVSLLQNQ------VKLLVIDSMEALV-PGVHEQRAPGQHPL 231
+ L+ ++ ++ Q VK++++DS+ A+V P + Q+ G PL
Sbjct: 179 LDMLQDLRGTMAQQATASSGTVKVVIVDSVTAVVAPLLGGQQREGNQPL 227
>UNIPROTKB|I3LTG9 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:QARTQDE
EMBL:FP565655 Ensembl:ENSSSCT00000023297 Uniprot:I3LTG9
Length = 322
Score = 145 (56.1 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
L T ++ LD L G+ G VTE+VG G+GKTQ CL +AA AH L V+YID
Sbjct: 82 LSTGIRSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL---CVAANVAH--SLQQKVLYID 136
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN 203
T+ R++++ + + G Q RI V++ + + + L+ ++ ++ Q
Sbjct: 137 SNGGLTASRILQLLQARTSDEEEQAGALQ----RIQVVRVFDIFQMLDVLQDLRGAVAQQ 192
Query: 204 ------QVKLLVIDSMEALVPGVHEQRAPGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
VK++V+DS+ A P A G L I TSL F +P VTN V
Sbjct: 193 VSSSAGTVKVVVVDSVTAGSPFSGGNEAAGAAVLCPSIPRSTSLCFF--LP-QVTNHV 247
>UNIPROTKB|Q0MR21 [details] [associations]
symbol:Q0MR21 "DMC1-like protein" species:37727
"Talaromyces marneffei" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
EMBL:DQ863299 ProteinModelPortal:Q0MR21 Uniprot:Q0MR21
Length = 337
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 59/196 (30%), Positives = 84/196 (42%)
Query: 64 FQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLS 123
F TA+ L QR + T K D L GG ++E+ G GKTQ +S
Sbjct: 82 FITAIELCHQRKKVFKIS----TGSKQFDTILGGGFQSSSISEVYGEFRCGKTQLSHTMS 137
Query: 124 LLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQP 183
++A LP GG +G V YID E TF R+ ++ A + S QE L
Sbjct: 138 VIAQLPKEMGGGEGKVAYIDTEGTFRPDRIAQI-AERYGLDAES---TQENISYARALNS 193
Query: 184 TSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQR---APGQHPLSWHISLITS 240
E +L K Q +LLVIDS+ R A Q L+ + ++
Sbjct: 194 EHQLELLNTLSK---EFAGGQYRLLVIDSIMNCFRVDFSGRGELAERQQKLNQFLIRLSH 250
Query: 241 LAEFSRIPIVVTNQVR 256
LAE + +++TNQV+
Sbjct: 251 LAEEFNVCVLMTNQVQ 266
>MGI|MGI:1261809 [details] [associations]
symbol:Rad51d "RAD51 homolog D" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1261809 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K10871 CTD:5892 HOGENOM:HOG000049134
HOVERGEN:HBG057455 OMA:QARTQDE OrthoDB:EOG4K0QP3 EMBL:AB007040
EMBL:AF034955 EMBL:Y15570 EMBL:AK017835 EMBL:BC049136
IPI:IPI00116701 RefSeq:NP_035365.1 UniGene:Mm.9286
ProteinModelPortal:O55230 SMR:O55230 MINT:MINT-415416 STRING:O55230
PhosphoSite:O55230 PRIDE:O55230 Ensembl:ENSMUST00000018985
GeneID:19364 KEGG:mmu:19364 InParanoid:O55230 NextBio:296433
Bgee:O55230 CleanEx:MM_RAD51L3 Genevestigator:O55230
GermOnline:ENSMUSG00000018841 Uniprot:O55230
Length = 329
Score = 141 (54.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 56/208 (26%), Positives = 100/208 (48%)
Query: 55 LVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTG 114
L+++ P A L E + +T L T + LD L G+ G VTE+VG G+G
Sbjct: 57 LLAQFSAFPLNGADLYEELKTSTAILS----TGIGSLDKLLDAGLYTGEVTEIVGGPGSG 112
Query: 115 KTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEM 174
KTQ CL +AA AH L V+Y+D T+ R++++ + + + A +
Sbjct: 113 KTQVCL---CVAANVAH--SLQQNVLYVDSNGGMTASRLLQLLQARTQD---EEKQASAL 164
Query: 175 AGRILVLQPTSLSEFTESLEKIKVSLLQNQ------VKLLVIDSMEALV-PGVHEQRAPG 227
RI V++ + + L+ ++ ++ Q + VK++++DS+ A+V P + Q+ G
Sbjct: 165 Q-RIQVVRSFDIFRMLDMLQDLRGTIAQQEATSSGAVKVVIVDSVTAVVAPLLGGQQREG 223
Query: 228 QHPLSWHISLITSLAEFSRIPIVVTNQV 255
+ + LA + +VVTN +
Sbjct: 224 LALMMQLARELKILARDLGVAVVVTNHL 251
Score = 41 (19.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 291 LGFHWAHAVTIRLVLEAKSG-------QRFMNVEKSPTSP 323
LG W+ + R++L+ G QR + + KSP P
Sbjct: 264 LGRSWSFVPSTRILLDVTEGAGTLGSSQRTVCLTKSPRQP 303
>UNIPROTKB|Q50LF6 [details] [associations]
symbol:tilDmc1 "RecA homolog Dmc1" species:8128
"Oreochromis niloticus" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504 GO:GO:0000150
EMBL:AERX01002235 EMBL:AB182646 RefSeq:XP_003438754.1
UniGene:Oni.44877 SMR:Q50LF6 Ensembl:ENSONIT00000024880
GeneID:100534532 Uniprot:Q50LF6
Length = 342
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 59/196 (30%), Positives = 87/196 (44%)
Query: 64 FQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLS 123
FQTA E A + + H+ T + D L GGV +TE G TGKTQ L
Sbjct: 87 FQTAF---EYSARRKQVF-HVTTGSQEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLC 142
Query: 124 LLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQ- 182
+ A LP G G VI+ID E+TF R+ ++ A F + H + + R +
Sbjct: 143 VTAQLPGEDGYSGGKVIFIDTENTFRPDRLRDI-ADRF-NVDHDAVLDNVLYARAYTSEH 200
Query: 183 PTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQR---APGQHPLSWHISLIT 239
L +F + K KLL+IDS+ AL R A Q L+ +S +
Sbjct: 201 QMELLDFVAA----KFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQ 256
Query: 240 SLAEFSRIPIVVTNQV 255
++E + + +TNQ+
Sbjct: 257 KISEEYNVAVFITNQM 272
>UNIPROTKB|K7EN92 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 EMBL:AC022916
HGNC:HGNC:9823 Ensembl:ENST00000592577 Uniprot:K7EN92
Length = 249
Score = 140 (54.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 46/151 (30%), Positives = 80/151 (52%)
Query: 84 LPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYID 143
L T + LD L G+ G VTE+VG G+GKTQ CL +AA AH GL V+Y+D
Sbjct: 84 LSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL---CMAANVAH--GLQQNVLYVD 138
Query: 144 VESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN 203
T+ R++++ + + + A+ + RI V+ + + + L++++ ++ Q
Sbjct: 139 SNGGLTASRLLQLLQAKTQD---EEEQAEALR-RIQVVHAFDIFQMLDVLQELRGTVAQQ 194
Query: 204 ------QVKLLVIDSMEALV-PGVHEQRAPG 227
VK++V+DS+ A+V P + Q+ G
Sbjct: 195 VTGSSGTVKVVVVDSVTAVVSPLLGGQQREG 225
>UNIPROTKB|Q9GRA3 [details] [associations]
symbol:CnDmc1 "DMC1 homologue CnDMC1" species:6087 "Hydra
vulgaris" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AB047581 ProteinModelPortal:Q9GRA3 SMR:Q9GRA3 Uniprot:Q9GRA3
Length = 331
Score = 141 (54.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 55/173 (31%), Positives = 83/173 (47%)
Query: 91 LDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPA--HYGGLDGGVIYIDVESTF 148
LD L GG+ +TE G TGKTQ L + A LP +Y G G V++ID E+TF
Sbjct: 99 LDKLLGGGIESMSITEAFGEFRTGKTQISHTLCVTAQLPGPNNYPG--GKVMFIDTENTF 156
Query: 149 TSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQP-TSLSEFTESLEKIKVSLLQNQ--V 205
R+ + A F + H + M G I+ + TS +F E L+ + +
Sbjct: 157 RPNRLRSI-ADRF-NLDH-----EAMLGNIVFCRAYTSEQQF-EVLDMVSAKFHEEAGVF 208
Query: 206 KLLVIDSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
KLL+IDS+ AL + R A Q L +S + ++E + + +TNQ+
Sbjct: 209 KLLIIDSIMALFRVDYSGRGELADRQQKLGQMLSKLQKISEEYNVAVWITNQM 261
>UNIPROTKB|G3V399 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:AL049840 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V399 SMR:G3V399 Ensembl:ENST00000553361
ArrayExpress:G3V399 Bgee:G3V399 Uniprot:G3V399
Length = 150
Score = 119 (46.9 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 33/84 (39%), Positives = 42/84 (50%)
Query: 66 TALLLMEQ--RAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLS 123
TAL L +Q R T+H L LDA L GG+P +TEL G + GKTQ L+L
Sbjct: 64 TALQLHQQKERFPTQHQ--RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLC 121
Query: 124 LLAALPAHYGGLDGGVIYIDVEST 147
L P +GGL+ Y + T
Sbjct: 122 LAVQFPRQHGGLEAEWQYFFIGGT 145
>ASPGD|ASPL0000094064 [details] [associations]
symbol:AN11929 species:162425 "Emericella nidulans"
[GO:0032545 "CURI complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0034456 "UTP-C complex" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 56/196 (28%), Positives = 85/196 (43%)
Query: 64 FQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLS 123
F TA+ L QR + T K D+ L GG ++E+ G GKTQ +S
Sbjct: 82 FITAMELSHQRKRVVRIS----TGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMS 137
Query: 124 LLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQP 183
++A LP GG +G V YID E TF R+ ++ A F A+E L
Sbjct: 138 VVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQI-AERFGV---DPDSAKENIAYARALNS 193
Query: 184 TSLSEFTESLEKIKVSLLQNQVKLLVIDS-MEALVPGV--HEQRAPGQHPLSWHISLITS 240
E +L K + + +LL+IDS M + A Q L+ + +
Sbjct: 194 EHQLELLNTLSK---EFVGGEYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAH 250
Query: 241 LAEFSRIPIVVTNQVR 256
+AE + +++TNQV+
Sbjct: 251 MAEEFNVCVLMTNQVQ 266
>ASPGD|ASPL0000098803 [details] [associations]
symbol:AN11930 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000150 "recombinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IEA]
[GO:0000709 "meiotic joint molecule formation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR012677 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
Gene3D:3.30.70.330 EMBL:BN001306 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
eggNOG:COG0468 KO:K10872 InterPro:IPR013632 Pfam:PF08423
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 56/196 (28%), Positives = 85/196 (43%)
Query: 64 FQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLS 123
F TA+ L QR + T K D+ L GG ++E+ G GKTQ +S
Sbjct: 82 FITAMELSHQRKRVVRIS----TGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMS 137
Query: 124 LLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQP 183
++A LP GG +G V YID E TF R+ ++ A F A+E L
Sbjct: 138 VVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQI-AERFGV---DPDSAKENIAYARALNS 193
Query: 184 TSLSEFTESLEKIKVSLLQNQVKLLVIDS-MEALVPGV--HEQRAPGQHPLSWHISLITS 240
E +L K + + +LL+IDS M + A Q L+ + +
Sbjct: 194 EHQLELLNTLSK---EFVGGEYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAH 250
Query: 241 LAEFSRIPIVVTNQVR 256
+AE + +++TNQV+
Sbjct: 251 MAEEFNVCVLMTNQVQ 266
>UNIPROTKB|Q5ARI8 [details] [associations]
symbol:AN9092.2 "Meiotic recombination protein (Dmc1),
putative (AFU_orthologue; AFUA_7G02200)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 56/196 (28%), Positives = 85/196 (43%)
Query: 64 FQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLS 123
F TA+ L QR + T K D+ L GG ++E+ G GKTQ +S
Sbjct: 82 FITAMELSHQRKRVVRIS----TGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMS 137
Query: 124 LLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQP 183
++A LP GG +G V YID E TF R+ ++ A F A+E L
Sbjct: 138 VVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQI-AERFGV---DPDSAKENIAYARALNS 193
Query: 184 TSLSEFTESLEKIKVSLLQNQVKLLVIDS-MEALVPGV--HEQRAPGQHPLSWHISLITS 240
E +L K + + +LL+IDS M + A Q L+ + +
Sbjct: 194 EHQLELLNTLSK---EFVGGEYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAH 250
Query: 241 LAEFSRIPIVVTNQVR 256
+AE + +++TNQV+
Sbjct: 251 MAEEFNVCVLMTNQVQ 266
>UNIPROTKB|A7MB17 [details] [associations]
symbol:XRCC2 "XRCC2 protein" species:9913 "Bos taurus"
[GO:0050769 "positive regulation of neurogenesis" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
eggNOG:NOG279678 KO:K10879 CTD:7516 HOGENOM:HOG000004802
HOVERGEN:HBG079347 OMA:DTDYHFD OrthoDB:EOG4X6C91
GeneTree:ENSGT00390000020445 EMBL:DAAA02012055 EMBL:BC151285
IPI:IPI00867036 RefSeq:NP_001095824.1 UniGene:Bt.33372
STRING:A7MB17 Ensembl:ENSBTAT00000043719 GeneID:789410
KEGG:bta:789410 InParanoid:A7MB17 NextBio:20929670 Uniprot:A7MB17
Length = 280
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/115 (30%), Positives = 61/115 (53%)
Query: 102 GVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSF 161
G V E GP GTGKT+ L+ LP GGL+ V++ID + F R++ +
Sbjct: 41 GDVLEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVVFIDTDYHFDMLRLVTVLEHRL 100
Query: 162 PEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN-QVKLLVIDSMEA 215
P+ S+ M + GR+ ++ +S ++ +L ++ L ++ V LL++DS+ A
Sbjct: 101 PQ--SSEEMVKHCLGRLFLVYCSSSTQLLLTLCSLETMLCRHPSVCLLILDSLSA 153
>UNIPROTKB|J3QR58 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007066 "female meiosis sister
chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
Ensembl:ENST00000461271 Uniprot:J3QR58
Length = 135
Score = 116 (45.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 23/72 (31%), Positives = 43/72 (59%)
Query: 105 TELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEI 164
TE+ G G GKTQ C++L++ +P +GG+ G ++ID E +F R++++ + I
Sbjct: 4 TEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATAC---I 60
Query: 165 FHSKGMAQEMAG 176
H + +A++ G
Sbjct: 61 QHLQLIAEKHKG 72
>UNIPROTKB|Q50LF7 [details] [associations]
symbol:eDmc1 "RecA homolog DMC1" species:7937 "Anguilla
japonica" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 EMBL:AB182645 EMBL:AB201845
ProteinModelPortal:Q50LF7 SMR:Q50LF7 Uniprot:Q50LF7
Length = 339
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 52/179 (29%), Positives = 80/179 (44%)
Query: 83 HLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYI 142
H+ T D + GG+ +TE G TGKTQ L + A LP G G VI+I
Sbjct: 99 HITTGSLEFDKLIGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEDGYTGGKVIFI 158
Query: 143 DVESTFTSRRMIEMGASSFPEIFHSKGMAQE-MAGRILVLQPTSLSEFTESLEKIKVSLL 201
D E+TF R+ ++ A F + QE + +L + + E L+ +
Sbjct: 159 DTENTFRPDRLKDI-ADRF-------SVDQEAVLDNVLYARAYTSEHQMELLDFVAAKFH 210
Query: 202 QNQ--VKLLVIDSMEALVPGVHEQR---APGQHPLSWHISLITSLAEFSRIPIVVTNQV 255
+ KLL+IDS+ AL R A Q L+ +S + ++E + + VTNQ+
Sbjct: 211 EEGGVFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 269
>UNIPROTKB|Q6FKF0 [details] [associations]
symbol:CAGL0L12100g "Similar to uniprot|P25453
Saccharomyces cerevisiae YER179w meiosis-specific protein"
species:284593 "Candida glabrata CBS 138" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR380958
GenomeReviews:CR380958_GR KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
RefSeq:XP_449294.1 ProteinModelPortal:Q6FKF0 GeneID:2890684
KEGG:cgr:CAGL0L12100g Uniprot:Q6FKF0
Length = 334
Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 57/217 (26%), Positives = 99/217 (45%)
Query: 43 DVELSEVRSALALVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFG 102
+V++ +++ A +++V F A + M+ R + T K LD+ L GG+
Sbjct: 62 EVKVEKIKEA---ANKLVKVGFVPATVQMDLRQKVISIS----TGSKQLDSVLGGGIMTM 114
Query: 103 VVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFP 162
+TE+ G GKTQ L + A LP GG +G V +ID E TF R+ ++ A +
Sbjct: 115 SITEVFGEFRCGKTQMSHTLCVTAQLPKSMGGGEGKVAFIDTEGTFRPERIKQI-AERY- 172
Query: 163 EIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHE 222
++ + R L S + E +E++ L L+++DS+ A +
Sbjct: 173 DLDPDSCLENITYARAL----NSEHQM-ELVEQLGEELSSGSYTLIIVDSIMANFRVDYC 227
Query: 223 QRAP---GQHPLSWHISLITSLAEFSRIPIVVTNQVR 256
R Q L+ H+ + LAE + + +TNQV+
Sbjct: 228 GRGELNERQQKLNQHLFKLNRLAEEFNLAVFMTNQVQ 264
>ZFIN|ZDB-GENE-040426-2490 [details] [associations]
symbol:rad51d "RAD51 homolog D (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
ZFIN:ZDB-GENE-040426-2490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OrthoDB:EOG4K0QP3
EMBL:BC066407 IPI:IPI00512042 RefSeq:NP_996959.1 UniGene:Dr.19061
ProteinModelPortal:Q6NYZ3 STRING:Q6NYZ3 PRIDE:Q6NYZ3 GeneID:404608
KEGG:dre:404608 InParanoid:Q6NYZ3 NextBio:20817676
ArrayExpress:Q6NYZ3 Bgee:Q6NYZ3 Uniprot:Q6NYZ3
Length = 327
Score = 127 (49.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 54/205 (26%), Positives = 93/205 (45%)
Query: 55 LVSEIVCPPFQTALLLMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTG 114
L+++ P A L E ++T L P+ LD L G+ G +TEL G G+G
Sbjct: 57 LLAQYTAYPISGADLYEELLSSTAILSTGSPS----LDKLLDSGLYTGEITELTGSPGSG 112
Query: 115 KTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEM 174
KTQ C +++ + H L V+YID + + R+++M + P Q++
Sbjct: 113 KTQVCFSVAVNIS---HQ--LKQTVVYIDTKGGMCANRLLQMLQTKTPNEQEQMEALQKI 167
Query: 175 AGRILVLQPTSLSEFTESLEKI---KVSLLQNQVKLLVIDSMEALV-PGVHEQRAPGQHP 230
V SL ++L K+S+ VK L++DS+ A++ P + ++ G
Sbjct: 168 KV-FRVFDVFSLLACLQNLRSTGLQKMSVGGGSVKALMVDSVSAVLSPILGGKQNEGMSL 226
Query: 231 LSWHISLITSLAEFSRIPIVVTNQV 255
L + +A+ I ++VTN V
Sbjct: 227 LMQVAGELKMIAKDFNIAVLVTNHV 251
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 287 IVAVLGFHWAHAVTIRLVLE 306
+ A LG W+H R++L+
Sbjct: 259 VKAGLGLSWSHVPRTRVLLQ 278
>UNIPROTKB|D3ZZP3 [details] [associations]
symbol:Rad51l3 "Protein Rad51l3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:CH473948 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 IPI:IPI00195181 UniGene:Rn.206266
Ensembl:ENSRNOT00000011912 Uniprot:D3ZZP3
Length = 275
Score = 116 (45.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 49/202 (24%), Positives = 83/202 (41%)
Query: 11 LPKSIANIFAARNITTAKDAXXXXXXXXXXXXDVELSE-VRSALALVSEIVCPPFQTALL 69
L + I + R I T D + V L+++ P A L
Sbjct: 12 LTEEIVQLLRGRKIKTVADLAAADLEEVAQKCGLSYKALVALRRVLLAQFSAFPLNGADL 71
Query: 70 LMEQRAATEHLGGHLPTRLKGLDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALP 129
E + +T L T + LD L G+ G +TE+VG G+GKTQ CL +AA
Sbjct: 72 YEELKTSTAILS----TGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVCL---CVAANV 124
Query: 130 AHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEF 189
AH L V+Y+D T+ R++++ + + + A + RI V+ + +
Sbjct: 125 AH--SLQQNVLYVDSNGGMTASRLLQLLQARTQD---EEKQASALQ-RIQVVHSFDIFQM 178
Query: 190 TESLEKIKVSLLQNQVKLLVID 211
+ L+ ++ ++ Q L D
Sbjct: 179 LDMLQDLRGTMAQQVTNHLTRD 200
Score = 44 (20.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 271 QKMDRILKDR-TRYYSHIVAVLGFHWAHAVTIRLVLEAKSG-------QRFMNVEKSPTS 322
Q + + +DR +R + LG W+ + R++LE G QR + + KSP
Sbjct: 192 QVTNHLTRDRDSRRFK---PALGRSWSFVPSTRILLEVFEGAGTLGRSQRTVRLIKSPRQ 248
Query: 323 P 323
P
Sbjct: 249 P 249
>UNIPROTKB|E2REH7 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050769 "positive regulation of neurogenesis"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10879 CTD:7516 OMA:DTDYHFD GeneTree:ENSGT00390000020445
EMBL:AAEX03010293 EMBL:AAEX03010294 RefSeq:XP_532771.3
ProteinModelPortal:E2REH7 Ensembl:ENSCAFT00000007971 GeneID:475548
KEGG:cfa:475548 NextBio:20851370 Uniprot:E2REH7
Length = 279
Score = 120 (47.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 102 GVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSF 161
G + E GP GTGKT+ L+ LP GGL+ V++ID + F R++ +
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRL 100
Query: 162 PEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN-QVKLLVIDSMEA 215
+ S+ M + GR+ ++ S ++ +L ++ + + + LL++DS+ A
Sbjct: 101 SQ--SSEEMVKHCLGRLFLVNCNSSTQLLLTLYSLETVVCSHPSLCLLILDSLSA 153
>SGD|S000002411 [details] [associations]
symbol:RAD57 "Protein that stimulates strand exchange"
species:4932 "Saccharomyces cerevisiae" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0033062 "Rhp55-Rhp57
complex" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=IPI] [GO:0000722 "telomere maintenance via recombination"
evidence=IMP] [GO:0045002 "double-strand break repair via
single-strand annealing" evidence=IMP] [GO:0000707 "meiotic DNA
recombinase assembly" evidence=IMP] [GO:0030491 "heteroduplex
formation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
SGD:S000002411 GO:GO:0005524 GO:GO:0003677 EMBL:BK006938
EMBL:Z48008 GO:GO:0000722 GO:GO:0008094 eggNOG:COG0468
GO:GO:0000707 InterPro:IPR013632 Pfam:PF08423 GO:GO:0030491
GO:GO:0033062 KO:K10958 OrthoDB:EOG4HTD1G EMBL:M65061 PIR:JQ1275
RefSeq:NP_010287.1 ProteinModelPortal:P25301 SMR:P25301
DIP:DIP-4774N IntAct:P25301 MINT:MINT-480305 STRING:P25301
EnsemblFungi:YDR004W GeneID:851567 KEGG:sce:YDR004W CYGD:YDR004w
HOGENOM:HOG000141828 OMA:YITTEGD NextBio:969013
Genevestigator:P25301 GermOnline:YDR004W Uniprot:P25301
Length = 460
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 37/127 (29%), Positives = 63/127 (49%)
Query: 91 LDAALCGGVPFGVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTS 150
+D L GG+ +TE+ G + TGK+Q ++L+L L GGL G +YI E +
Sbjct: 107 MDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITTEGDLPT 166
Query: 151 RRMIEMGASSFPEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLL----QNQVK 206
+R+ M SS P + G+ Q I + L E + +++ +L + +K
Sbjct: 167 QRLESM-LSSRPA-YEKLGITQS---NIFTVSCNDLIN-QEHIINVQLPILLERSKGSIK 220
Query: 207 LLVIDSM 213
L++IDS+
Sbjct: 221 LVIIDSI 227
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 278 KDRTRYYSHIVAVLGFHWAHAVTIRLVLE 306
+ + R + + V LG W++ V+ R++L+
Sbjct: 375 QSKKRKFDYRVPNLGLTWSNHVSTRILLQ 403
>UNIPROTKB|Q0U9F0 [details] [associations]
symbol:SNOG_11614 "Putative uncharacterized protein"
species:321614 "Phaeosphaeria nodorum SN15" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709
EMBL:CH445343 RefSeq:XP_001801853.1 ProteinModelPortal:Q0U9F0
EnsemblFungi:SNOT_11614 GeneID:5978761 KEGG:pno:SNOG_11614
Uniprot:Q0U9F0
Length = 353
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 128 LPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSFPEIFHSKGMAQEMA-GRILVLQPTSL 186
LP GG +G V YID E TF R+ ++ A F G+ E I + +
Sbjct: 162 LPKDMGGAEGKVAYIDTEGTFRPERIAQI-AERF-------GVDPETTQDNITYARAVNS 213
Query: 187 SEFTESLEKIKVSLLQNQVKLLVIDSMEALVPGVHEQRAP---GQHPLSWHISLITSLAE 243
E L K+ + N+ +LL+IDS+ AL + R Q L+ +S +T +AE
Sbjct: 214 EHQMELLNKVAEFFVGNEYRLLIIDSIMALFRVDYTGRGELNERQQKLNQFLSKLTHVAE 273
Query: 244 FSRIPIVVTNQVR 256
+ +++TNQV+
Sbjct: 274 EFNVAVLLTNQVQ 286
>UNIPROTKB|F1SSP5 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050769 "positive regulation of neurogenesis"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10879 OMA:DTDYHFD GeneTree:ENSGT00390000020445 EMBL:FP102134
EMBL:FP103034 RefSeq:XP_003134584.1 Ensembl:ENSSSCT00000017888
GeneID:100514260 KEGG:ssc:100514260 Uniprot:F1SSP5
Length = 280
Score = 112 (44.5 bits), Expect = 0.00074, P = 0.00074
Identities = 30/115 (26%), Positives = 58/115 (50%)
Query: 102 GVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSF 161
G + E GP GTGKT+ L+ LP GGL+ V++ID + F R++ +
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKAEGGLEVEVLFIDTDYHFDMLRLVTVLEHRL 100
Query: 162 PEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN-QVKLLVIDSMEA 215
+ S+ + + GR+ ++ +S ++ +L ++ + V +L++DS+ A
Sbjct: 101 SQ--SSEEIMKYCLGRLFLVYCSSSTQLLLTLYSLETLFCSHPSVCVLIVDSLSA 153
>UNIPROTKB|I3LM31 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00390000020445 EMBL:FP102134 EMBL:FP103034
Ensembl:ENSSSCT00000026354 Uniprot:I3LM31
Length = 280
Score = 112 (44.5 bits), Expect = 0.00074, P = 0.00074
Identities = 30/115 (26%), Positives = 58/115 (50%)
Query: 102 GVVTELVGPAGTGKTQFCLKLSLLAALPAHYGGLDGGVIYIDVESTFTSRRMIEMGASSF 161
G + E GP GTGKT+ L+ LP GGL+ V++ID + F R++ +
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKAEGGLEVEVLFIDTDYHFDMLRLVTVLEHRL 100
Query: 162 PEIFHSKGMAQEMAGRILVLQPTSLSEFTESLEKIKVSLLQN-QVKLLVIDSMEA 215
+ S+ + + GR+ ++ +S ++ +L ++ + V +L++DS+ A
Sbjct: 101 SQ--SSEEIMKYCLGRLFLVYCSSSTQLLLTLYSLETLFCSHPSVCVLIVDSLSA 153
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 357 345 0.00097 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 114
No. of states in DFA: 605 (64 KB)
Total size of DFA: 205 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.09u 0.12s 25.21t Elapsed: 00:00:01
Total cpu time: 25.10u 0.13s 25.23t Elapsed: 00:00:01
Start: Fri May 10 08:06:02 2013 End: Fri May 10 08:06:03 2013
WARNINGS ISSUED: 1