Query 035779
Match_columns 659
No_of_seqs 227 out of 792
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 06:20:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035779.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035779hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02703 beta-fructofuranosida 100.0 2E-133 5E-138 1086.2 40.3 534 105-649 43-592 (618)
2 PLN02973 beta-fructofuranosida 100.0 2E-130 5E-135 1058.1 40.4 481 176-659 89-569 (571)
3 PLN03005 beta-fructofuranosida 100.0 2E-129 3E-134 1050.6 39.9 481 176-659 65-548 (550)
4 PF12899 Glyco_hydro_100: Alka 100.0 8E-127 2E-131 1013.6 35.3 435 196-634 1-436 (436)
5 PF06202 GDE_C: Amylo-alpha-1, 100.0 4E-57 8.7E-62 486.0 30.8 324 223-626 23-370 (370)
6 COG3408 GDB1 Glycogen debranch 100.0 8.8E-47 1.9E-51 429.0 29.2 332 212-637 269-615 (641)
7 TIGR01561 gde_arch glycogen de 100.0 6.4E-47 1.4E-51 425.4 23.2 262 224-573 287-575 (575)
8 TIGR01531 glyc_debranch glycog 100.0 2.7E-46 5.7E-51 442.0 25.0 347 224-629 1026-1462(1464)
9 PRK10137 alpha-glucosidase; Pr 100.0 3.6E-32 7.7E-37 312.8 31.9 347 221-629 335-781 (786)
10 KOG3625 Alpha amylase [Carbohy 99.9 2.3E-25 5.1E-30 251.5 19.5 344 226-631 1077-1516(1521)
11 TIGR01577 oligosac_amyl oligos 99.9 3.7E-21 8.1E-26 219.7 29.6 331 196-631 253-613 (616)
12 COG3459 Cellobiose phosphoryla 99.8 1.9E-19 4.2E-24 207.0 21.5 337 234-641 615-991 (1056)
13 PRK13271 treA trehalase; Provi 99.8 2.2E-17 4.8E-22 186.3 28.2 342 193-632 122-537 (569)
14 PLN02567 alpha,alpha-trehalase 99.7 7.5E-16 1.6E-20 174.2 27.6 363 194-639 112-552 (554)
15 PF04685 DUF608: Protein of un 99.7 2.6E-17 5.5E-22 177.9 8.6 316 239-621 23-363 (365)
16 PRK13272 treA trehalase; Provi 99.7 7.8E-15 1.7E-19 164.8 28.3 344 193-634 123-539 (542)
17 PRK13270 treF trehalase; Provi 99.6 5.3E-14 1.1E-18 158.5 27.8 341 194-634 135-549 (549)
18 PF01204 Trehalase: Trehalase; 99.6 3.6E-14 7.9E-19 159.6 24.1 317 226-630 124-510 (512)
19 PF05592 Bac_rhamnosid: Bacter 99.6 1.1E-14 2.4E-19 162.3 18.4 337 189-648 114-464 (509)
20 COG3387 SGA1 Glucoamylase and 99.4 2.4E-11 5.1E-16 139.5 26.7 312 227-632 281-605 (612)
21 TIGR01535 glucan_glucosid gluc 99.4 5.4E-10 1.2E-14 129.0 32.8 327 227-631 291-632 (648)
22 PF03200 Glyco_hydro_63: Manno 99.2 9.8E-10 2.1E-14 129.6 21.5 331 249-627 413-797 (801)
23 COG4354 Predicted bile acid be 99.0 1.3E-08 2.9E-13 113.4 20.1 305 240-622 368-714 (721)
24 PF00723 Glyco_hydro_15: Glyco 98.7 9.1E-07 2E-11 98.2 21.9 198 197-425 3-225 (448)
25 COG1626 TreA Neutral trehalase 98.7 1.8E-06 4E-11 96.6 23.7 314 226-632 167-553 (558)
26 KOG0602 Neutral trehalase [Car 98.6 8.6E-07 1.9E-11 100.7 17.4 328 226-644 181-579 (600)
27 PF06824 DUF1237: Protein of u 98.1 7.8E-05 1.7E-09 82.4 15.9 343 209-624 29-418 (424)
28 KOG2119 Predicted bile acid be 97.8 0.0001 2.2E-09 84.8 11.2 245 314-621 557-822 (879)
29 KOG2161 Glucosidase I [Carbohy 97.7 0.003 6.4E-08 73.5 20.9 280 316-623 504-839 (849)
30 COG3538 Uncharacterized conser 97.3 0.033 7.1E-07 60.6 20.8 202 230-441 60-287 (434)
31 cd00249 AGE AGE domain; N-acyl 78.5 1E+02 0.0022 33.2 21.7 96 315-429 54-152 (384)
32 cd02892 SQCY_1 Squalene cyclas 75.9 1.8E+02 0.0038 34.6 21.5 142 189-360 275-422 (634)
33 PLN02993 lupeol synthase 55.5 4.8E+02 0.01 32.1 23.4 91 536-630 654-758 (763)
34 COG1331 Highly conserved prote 49.7 4.1E+02 0.0088 32.2 15.0 47 559-605 407-461 (667)
35 TIGR01507 hopene_cyclase squal 47.3 2.8E+02 0.0061 33.2 13.5 139 189-355 333-487 (635)
36 PF03632 Glyco_hydro_65m: Glyc 46.7 46 0.001 37.1 6.6 155 226-404 28-195 (370)
37 PLN03012 Camelliol C synthase 35.2 9.5E+02 0.021 29.7 22.2 87 536-626 654-754 (759)
38 PF07221 GlcNAc_2-epim: N-acyl 33.3 6.3E+02 0.014 27.0 14.2 93 318-433 85-180 (346)
39 PF12854 PPR_1: PPR repeat 31.6 55 0.0012 23.6 2.9 23 566-588 11-33 (34)
40 KOG4125 Acid trehalase [Carboh 31.1 2.8E+02 0.0061 32.2 9.5 80 319-404 373-458 (682)
41 TIGR01507 hopene_cyclase squal 30.6 5.8E+02 0.012 30.6 12.6 135 189-358 284-423 (635)
42 PF07721 TPR_4: Tetratricopept 26.1 1.1E+02 0.0023 20.7 3.4 25 562-586 1-25 (26)
43 COG4848 Uncharacterized protei 24.8 49 0.0011 34.3 2.1 37 28-64 126-162 (265)
44 PF06051 DUF928: Domain of Unk 24.1 76 0.0017 32.0 3.4 32 386-417 144-175 (189)
45 PF07470 Glyco_hydro_88: Glyco 22.2 9.8E+02 0.021 25.6 17.1 240 311-633 65-334 (336)
46 PF13249 Prenyltrans_2: Prenyl 21.5 2E+02 0.0043 25.1 5.2 31 234-266 24-56 (113)
47 PF13428 TPR_14: Tetratricopep 21.4 2.1E+02 0.0045 21.3 4.5 31 562-592 1-31 (44)
48 PF07221 GlcNAc_2-epim: N-acyl 21.0 4.8E+02 0.01 28.0 8.9 93 320-431 27-119 (346)
49 PF03663 Glyco_hydro_76: Glyco 20.9 6E+02 0.013 28.1 9.8 102 315-432 156-261 (370)
50 TIGR03463 osq_cycl 2,3-oxidosq 20.8 1.5E+03 0.032 27.2 26.0 142 189-361 273-423 (634)
No 1
>PLN02703 beta-fructofuranosidase
Probab=100.00 E-value=2.3e-133 Score=1086.21 Aligned_cols=534 Identities=55% Similarity=0.978 Sum_probs=505.9
Q ss_pred ccccchhhhhhhhcccccCCCCccChh---hhhhhh----hhccCCccccccccccccccCCCCCCccccccchhhhh--
Q 035779 105 LEDVKSSVAWTKESSEASQNGEILKPE---KAKKTV----RLQGHENNVTENVILPKALPLKPCPSVGTNLEAFDLAL-- 175 (659)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 175 (659)
-.+++.++++++.+.|++++|++.... |||||+ |||||| |+|.++|++||++|+.+ ++|.+..+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 116 (618)
T PLN02703 43 KVRCTNSHEYSSVSACQDADGSFHSSNECLKGKKFVQMRCKCQKHD---VEESIRSTLLPSDGLKS---DLDEMPLPVNG 116 (618)
T ss_pred ccccccccceeccCcccccccccccchhhhhhhhHHHHhhhhhhhh---hhccccccccccccccc---ccccccCcccC
Confidence 356789999999999999999985443 499999 899999 99999999999999987 445554443
Q ss_pred -ccccCCCCCCCCCCcchHHHHHHHHHHhhhccccCccceeeccCCCCc-ccCCCCCCchhhhHHHHHHHHhcCCCCHHH
Q 035779 176 -RSIVGNHQENGESTGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNA-EALNYNQVFVRDFVPTALACLMIEPAEPEI 253 (659)
Q Consensus 176 -~~~~~~~~~~~~~~~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~-~~~nY~~vfGRDt~IS~lglLl~~~g~pei 253 (659)
.+..|+.. ++++++++++||++|++|||+|+|+|+|||||.|+++ .++||++||+||++|+++++|+. |++||
T Consensus 117 ~~~~~~~~~---~~~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~--Ge~eI 191 (618)
T PLN02703 117 SFSSNGNAQ---SVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLK--GEYDI 191 (618)
T ss_pred cCCCCCccc---ccCCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHC--CCHHH
Confidence 44445444 4589999999999999999999999999999999864 67999999999999999999998 99999
Q ss_pred HHHHHHHHHhhccccccccccccCCCccCCcceeccccccc-----ccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHH
Q 035779 254 VKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQ-----KETLVADFGGSAIGRVAPVDSGFWWIILLRSYTK 328 (659)
Q Consensus 254 ar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~-----~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~ 328 (659)
||+||.++++||+++|++|+|+.++|+||.+|||+++|.++ ++.+.+|||+.+||++++|||+|||||++++|.+
T Consensus 192 VrnFl~~tL~lq~~ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k 271 (618)
T PLN02703 192 VRNFILYTLQLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGK 271 (618)
T ss_pred HHHHHHHHHhhhhhHHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987543 4578899999999999999999999999999999
Q ss_pred HcCChhhhccHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChH
Q 035779 329 CTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKE 408 (659)
Q Consensus 329 ~TGD~sfl~~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~ 408 (659)
.|||.+|++++.||++|+.|++.|+.++|+++|+|+++|++||+|+||+++|+|+|||+|||.||||+.+|+....+.++
T Consensus 272 ~TgD~sf~e~~~~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~~~e 351 (618)
T PLN02703 272 CTGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSVD 351 (618)
T ss_pred hhccHHHhhhhhHHHHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987767788
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCccccc
Q 035779 409 LIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFR 488 (659)
Q Consensus 409 ~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~R 488 (659)
.++++..|+..|+.||+++||+|.+++|+||||+||+|++.|.|+|||||++||+|+.+|||++||||+|||+|+++|||
T Consensus 352 ~i~~i~~rl~~L~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfR 431 (618)
T PLN02703 352 LIRALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFR 431 (618)
T ss_pred HHHHHhhhhhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHH
Q 035779 489 WFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLL 568 (659)
Q Consensus 489 ifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~ 568 (659)
||++||+||+++||++++|+++||++|+++|++|++.||+|+|+|++++.+||++|+++|+|.||||||||+||.++|++
T Consensus 432 ffsLGNlLAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~ 511 (618)
T PLN02703 432 FFTLGNLWSIVSSLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQL 511 (618)
T ss_pred hhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCCChhhhccchhhhcc
Q 035779 569 TAASIKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKI 648 (659)
Q Consensus 569 ~~Al~k~G~~~~A~~ll~~~~~~l~~~~~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~ 648 (659)
++|++|+|+.+.|+++++.++.++..+.|||||||++|+|+|++||.+||||||+||+++++|+||+++++++|+|++++
T Consensus 512 ~aA~iK~Gr~~lA~ral~~ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~ 591 (618)
T PLN02703 512 TVASIKMGRPEIAEKAVELAERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDL 591 (618)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHhhhccChhhccCCCCcCcceeccccCchHHHHHHHHHHHHhChhhccccccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred c
Q 035779 649 A 649 (659)
Q Consensus 649 ~ 649 (659)
.
T Consensus 592 ~ 592 (618)
T PLN02703 592 R 592 (618)
T ss_pred h
Confidence 3
No 2
>PLN02973 beta-fructofuranosidase
Probab=100.00 E-value=2.4e-130 Score=1058.09 Aligned_cols=481 Identities=72% Similarity=1.260 Sum_probs=468.3
Q ss_pred ccccCCCCCCCCCCcchHHHHHHHHHHhhhccccCccceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCCHHHHH
Q 035779 176 RSIVGNHQENGESTGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVK 255 (659)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~peiar 255 (659)
+|-.+++-...+|++++++++||++|++|||+|+|+|||||||.|++.+++||++||+||++|+++++|+. |++|+||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~aw~~l~~s~v~~~g~pvgtvAa~d~~~~~lNY~qVFiRDfVpsaLafLl~--Ge~eIVr 166 (571)
T PLN02973 89 RSGFNTPRSQPGFESHPMVGEAWDALRRSMVYFRGQPVGTIAAVDNSEEKLNYDQVFVRDFVPSALAFLMN--GEPDIVK 166 (571)
T ss_pred cccCCCCcccccCCCCcHHHHHHHHHHhheEEECCeeeeeeeccCCccccccCcchhhhccHHHHHHHHHC--CCHHHHH
Confidence 34555666666789999999999999999999999999999999998889999999999999999999998 9999999
Q ss_pred HHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhh
Q 035779 256 NFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYAL 335 (659)
Q Consensus 256 ~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sf 335 (659)
+||..+++||+++|++|+|+.++|+||++|||+|+|.++++.+.+|||+++||||+||||+|||||++++|.+.|||.+|
T Consensus 167 nFl~~TL~lq~~ektld~~q~g~G~mPaSfkv~~~p~~~~e~l~aDfG~~aIGRV~pVDS~LWWIIllraY~k~TgD~s~ 246 (571)
T PLN02973 167 NFLLKTLRLQSWEKKIDRFQLGEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSL 246 (571)
T ss_pred HHHHHHHhhhhhHHHHHhcccCCCCcCceeeecccccCccccccccccccccccccccchhhHHHHHHHHHHHhccchhh
Confidence 99999999999999999999999999999999998877888999999999999999999999999999999999999999
Q ss_pred hccHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHH
Q 035779 336 AELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDK 415 (659)
Q Consensus 336 l~~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ 415 (659)
+++|+||++|+||+.+|+.++|+++|+|+++|++||+|++|+++|+|+|||+|||.||||+.+|+....+.++.++++.+
T Consensus 247 ~e~pevQrgi~lil~lcL~~~Fd~~ptLlVpDgs~miDrrMgv~G~pLeiQaLfy~ALR~a~~~L~~~~~~~~~i~~i~~ 326 (571)
T PLN02973 247 ADMPECQKGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKHDGEGKEMVEQIVK 326 (571)
T ss_pred hhcHHHHHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999877667889999999
Q ss_pred HHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchh
Q 035779 416 RITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNC 495 (659)
Q Consensus 416 ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~ 495 (659)
|+.+|+++++++||+|.+++|+||||+||+|++.|.|+|||||++||+||++|||.+|||++|||+|+++|||||++||+
T Consensus 327 rl~~L~~hir~~ywld~~~ln~iyRykteey~~~a~NkfNi~p~sip~wl~dwlp~~gGY~igNv~Pa~~DfRffslGNl 406 (571)
T PLN02973 327 RLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWFALGNC 406 (571)
T ss_pred hHHHHHHHHHHHHhcCHHHhhhHhhcchhhcchhhhhhccCCccccchhhhhhccCCCceeeeecccccCCcchhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHc
Q 035779 496 IAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKT 575 (659)
Q Consensus 496 LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~ 575 (659)
||+++||++++|+++||+.|+++|++|++.||||+|+|++++.+||++|+++|+|.||||||||+||.++|++++|++|.
T Consensus 407 lAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkicyPaie~~EWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~ 486 (571)
T PLN02973 407 IAILSSLATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKT 486 (571)
T ss_pred HHHHhccCCHHHHHHHHHHHHHHHHHHHhcCCcceeccCcCCccceehhccCCCCCccceecCCCccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCCChhhhccchhhhccccccccc
Q 035779 576 GRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKIAKPRLSR 655 (659)
Q Consensus 576 G~~~~A~~ll~~~~~~l~~~~~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~~~~~~~ 655 (659)
|+.+.|+++++.+++++..+.|||||||++|+|+|++||.+||||||+||+++++|+||+++++++|+|++++ +|.++|
T Consensus 487 gr~~lA~ral~~ae~rl~~d~WpEyyDGktGr~iGkqar~yQTWSiAG~LlA~~~L~~P~~~~~~~~~e~~~~-~~~~~~ 565 (571)
T PLN02973 487 GRPQIARRAIEVAEARLHKDHWPEYYDGKVGRYVGKQSRKNQTWSVAGYLVAKMMLEDPSHVGMVCLEEDKQM-KPVMRR 565 (571)
T ss_pred CCHHHHHHHHHHHHHHhhhcCChhhcCCCCCcCcceeccccCchHHHHHHHHHHHhhChhhcccccccccccc-cchhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred cCCC
Q 035779 656 SASF 659 (659)
Q Consensus 656 ~~~~ 659 (659)
|+||
T Consensus 566 ~~~~ 569 (571)
T PLN02973 566 SNSW 569 (571)
T ss_pred cccc
Confidence 9998
No 3
>PLN03005 beta-fructofuranosidase
Probab=100.00 E-value=1.5e-129 Score=1050.59 Aligned_cols=481 Identities=73% Similarity=1.274 Sum_probs=464.7
Q ss_pred ccccCCCCCC--CCCCcchHHHHHHHHHHhhhccccCccceeeccCCCCc-ccCCCCCCchhhhHHHHHHHHhcCCCCHH
Q 035779 176 RSIVGNHQEN--GESTGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNA-EALNYNQVFVRDFVPTALACLMIEPAEPE 252 (659)
Q Consensus 176 ~~~~~~~~~~--~~~~~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~-~~~nY~~vfGRDt~IS~lglLl~~~g~pe 252 (659)
+|-.++|-.. +.|++++++++||++|++|||+|+|+|+|||||.|++. +++||++||+||++|+++++|+. |++|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qvF~RDfvpsaLafLl~--Ge~e 142 (550)
T PLN03005 65 RSVLDTPLSSARNSFEPHPMMAEAWEALRRSMVFFRGQPVGTLAAVDNTTDEVLNYDQVFVRDFVPSALAFLMN--GEPD 142 (550)
T ss_pred ccCCCCCcccccCCCCCCcHHHHHHHHHHhheEEECCccceeeeecCCccccccCCCceeecccHHHHHHHHHC--CCHH
Confidence 3344444443 67999999999999999999999999999999999864 67999999999999999999998 9999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCC
Q 035779 253 IVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRD 332 (659)
Q Consensus 253 iar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD 332 (659)
+||+||.++++||+++|++|+|+.++|+||++|||+|+|.++++.+.+|||+++||||+||||+|||||++++|.+.|||
T Consensus 143 IVrnFl~~~L~Lq~~ek~~d~~q~g~G~mPaSfkv~~~p~~~~~~l~aDfG~~aIGRv~pVDS~LWWIIllraY~k~tgD 222 (550)
T PLN03005 143 IVKHFLLKTLQLQGWEKRVDRFKLGEGVMPASFKVLHDPIRETDNIVADFGESAIGRVAPVDSGFWWIILLRAYTKSTGD 222 (550)
T ss_pred HHHHHHHHHHHHhhhhhhhhcccCCCCCcCceeeecccccCCCccccccccccccccccccchhhHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999998766777788999999999999999999999999999999999
Q ss_pred hhhhccHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHH
Q 035779 333 YALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIER 412 (659)
Q Consensus 333 ~sfl~~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~ 412 (659)
.+|+++|+||++|+||+++|+.++|+++|+|+++|++||+||+|+++|+|+|||||||.||||+.+|+....+.++.+++
T Consensus 223 ~s~~e~pevQrgi~lil~lcLa~~Fd~~ptLlvpDgs~miDRrMgv~G~pLeiQaLfy~ALR~~~~~L~~~~~~~~~i~~ 302 (550)
T PLN03005 223 LTLSETPECQKGMKLILSLCLAEGFDTFPTLLCADGCSMIDRRMGVYGYPIEIQALFFMALRSALSMLKPDGDGREFIER 302 (550)
T ss_pred hhhhhChHHHHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998877667889999
Q ss_pred HHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCccccccccc
Q 035779 413 IDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLV 492 (659)
Q Consensus 413 l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~Rifal 492 (659)
+.+|+.+|++||+++||+|.+++|+|||||||+|++.|.|+|||+|++||+||++|||++|||++|||+|+++|||||++
T Consensus 303 i~~rl~~L~~h~r~yyWld~~~ln~iyr~kteey~~~a~NkfNi~pd~ip~wl~dwlp~~gGY~igNv~pa~~dfRffsl 382 (550)
T PLN03005 303 IVKRLHALSFHMRNYFWLDHQNLNDIYRFKTEEYSHTAVNKFNVMPDSIPEWVFDFMPLRGGYFVGNVGPAHMDFRWFAL 382 (550)
T ss_pred HHHHHHHHHHHHHHheecchhhhhhhhhccHhhhchhhhhccccCCccchhhhhhhcccCCceeeeecccccCCceehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHH
Q 035779 493 GNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAAS 572 (659)
Q Consensus 493 GN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al 572 (659)
||+||+++||++++|+++||+.|+++|++|++.||+|+|+|+++..+|+++|+++|+|.||||||||+||.++|++++|+
T Consensus 383 GNllAILs~Lat~~Qs~aIm~lIe~~w~~Lv~~MPlkIcyPa~e~~eWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~ 462 (550)
T PLN03005 383 GNCVSILSSLATPDQSMAIMDLLEHRWEELVGEMPLKICYPCLEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWQLTAAC 462 (550)
T ss_pred hhHHHHHhccCCHHHHHHHHHHHHHHHHHHhccCCcceeecccCCccceecccCCCCCCCccccCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCCChhhhccchhhhcccccc
Q 035779 573 IKTGRPQIAKRAIELAEQRLSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENPSNLLMISLEEDKKIAKPR 652 (659)
Q Consensus 573 ~k~G~~~~A~~ll~~~~~~l~~~~~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~~~~ 652 (659)
+|.|+.+.|+++++.++.++..+.|||||||++|+|+|++||.+||||||+||+++++|++|+++++++|+|++.. +|.
T Consensus 463 iK~gr~~lA~ral~~ae~rl~~d~WpEyydGktGr~iGkqar~~QTWSiAG~Lla~~~L~~P~~~~~~~~~e~~~~-~~~ 541 (550)
T PLN03005 463 IKTGRPQIARRAVDLIESRLHRDCWPEYYDGKLGRYVGKQARKYQTWSIAGYLVAKMLLEDPSHIGMISLEEDKLM-KPV 541 (550)
T ss_pred HHcCCHHHHHHHHHHHHHHhhhcCchhhcCCCCCcccceeccccCchHHHHHHHHHHHhhChhhcccccccccccc-chh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988 999
Q ss_pred ccccCCC
Q 035779 653 LSRSASF 659 (659)
Q Consensus 653 ~~~~~~~ 659 (659)
++||+||
T Consensus 542 ~~~~~~~ 548 (550)
T PLN03005 542 IKRSASW 548 (550)
T ss_pred hhccccc
Confidence 9999998
No 4
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=100.00 E-value=8.2e-127 Score=1013.63 Aligned_cols=435 Identities=74% Similarity=1.298 Sum_probs=427.1
Q ss_pred HHHHHHHhhhccccCccceeeccCCCCc-ccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhcccccccccc
Q 035779 196 EALERLKKSYVYFKGKPVGTFAAMDPNA-EALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNF 274 (659)
Q Consensus 196 ~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~-~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~ 274 (659)
+|||+|++|+|+|+|+|||||||.|+++ +++||++||.||+++|++.+|+. |++||||+||..+++||+++|++|+|
T Consensus 1 ~a~~~l~~s~v~~~g~pvGtvAa~d~~~~~~lNY~qvF~RDfvps~l~fL~~--g~~eIVrnFL~~tl~Lq~~~~~~d~~ 78 (436)
T PF12899_consen 1 EAWELLERSIVYYQGQPVGTVAALDPSAEEALNYDQVFVRDFVPSALAFLMK--GEPEIVRNFLLETLQLQSWEKQVDCF 78 (436)
T ss_pred ChHHHHhhheEeeCCceeeeeeecCCcccccccccceEeecChHHHHHHHHc--CCHHHHHHHHHHHHhhhhhhhhcccc
Confidence 5999999999999999999999999988 78999999999999999999998 99999999999999999999999999
Q ss_pred ccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccC
Q 035779 275 TLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLS 354 (659)
Q Consensus 275 ~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~ 354 (659)
++++|+||+||||++++ +++++++|||+++||||+||||++||||+|++|.+.|||.+|.++|+||++|+.|+++|+.
T Consensus 79 ~~g~G~mPaSFkv~~~~--~~e~l~aDfGe~AIgRv~pVDs~~WWiillraY~k~tgD~s~~~~~~~Q~gi~liL~lcL~ 156 (436)
T PF12899_consen 79 KPGRGVMPASFKVLHEN--EEETLIADFGERAIGRVAPVDSGLWWIILLRAYVKATGDYSLAESPEVQRGIRLILDLCLA 156 (436)
T ss_pred ccCCCcccceEEEecCC--CCceEecCcchhhhccccCcccccHHHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHHHcc
Confidence 99999999999999865 6788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccc
Q 035779 355 DGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQ 434 (659)
Q Consensus 355 dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~ 434 (659)
+||+++|+|+++||+|||||+|+++|+|+|||+|||.||||+.+|+....+.++.++++.+|+.+|+.||++|||+|.++
T Consensus 157 ~~Fd~~PtLlvpDg~~MiDRrMgv~G~PlEiQ~Lf~~aLr~a~~ll~~~~~~~~~~~~i~~rl~~L~~h~r~~yWld~~~ 236 (436)
T PF12899_consen 157 DGFDMFPTLLVPDGACMIDRRMGVYGHPLEIQALFYMALRCARELLKPDEEGKDLIERIDKRLHALSFHIREYYWLDLKR 236 (436)
T ss_pred cccCCCceEEecCCceeecccccccCCcchHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 99999999999999999999999999999999999999999999999876778899999999999999999999999999
Q ss_pred hhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHH
Q 035779 435 LNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDL 514 (659)
Q Consensus 435 l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~ 514 (659)
+|+||||+||+||++|+|||||+|++||+||++|||++|||++||++|+++|||||++||+||+++||+|++|+++|++.
T Consensus 237 ln~iyr~~teey~~~a~N~fNi~p~~ip~wl~dwlp~~gGY~ignv~P~~~dfRff~lGNlLAiLsgLat~~qa~~I~~l 316 (436)
T PF12899_consen 237 LNEIYRYKTEEYGHTAVNKFNIYPDSIPDWLFDWLPEKGGYFIGNVSPARMDFRFFSLGNLLAILSGLATPEQAEAIMDL 316 (436)
T ss_pred HHHHHhccHhhhhhhhhhcccCCcccchHHHHHhcccCCceeEeeccccccceeehhhhhHHHHHhcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhcC
Q 035779 515 IEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSK 594 (659)
Q Consensus 515 V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~~ 594 (659)
|+++|++|+++||+|+|+|++++.+|++.|+++|+|.||||||||+||+++|++++|++|.|+.+.|++++...++++..
T Consensus 317 Ie~~~~~L~g~mPlki~yPale~~eWri~tg~dpKN~PwsYHNGG~WP~LlW~~~aA~ik~gr~~lA~~al~~a~~rL~~ 396 (436)
T PF12899_consen 317 IEERWEDLVGPMPLKICYPALEGEEWRIYTGCDPKNTPWSYHNGGSWPVLLWFLTAALIKMGRPELAERALEAAENRLSK 396 (436)
T ss_pred HHHHHhhhccccchhhccCCCCCCCCccccCcCcCccccccccCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCC
Q 035779 595 DGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVENP 634 (659)
Q Consensus 595 ~~~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~~P 634 (659)
++|||||||++|+|+|++|+.+||||||+||+++++|+||
T Consensus 397 dewpEyydGktGrp~Gkqar~~QTWSaAgyLlA~~~l~~p 436 (436)
T PF12899_consen 397 DEWPEYYDGKTGRPMGKQARKYQTWSAAGYLLAKHLLENP 436 (436)
T ss_pred cCCcccccCCCCCcccccccccCchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999998
No 5
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=100.00 E-value=4e-57 Score=485.99 Aligned_cols=324 Identities=25% Similarity=0.345 Sum_probs=254.9
Q ss_pred cccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCC
Q 035779 223 AEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADF 302 (659)
Q Consensus 223 ~~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~df 302 (659)
++.|||.. ||||++||++++++. +++++.+|++|.++++.| .+|+|||.+.. + ..
T Consensus 23 AG~PWF~~-~GRDt~Isl~gl~l~-~~~~~~a~~~L~~~~~~~-----------~~G~ipn~~~~------~---~~--- 77 (370)
T PF06202_consen 23 AGYPWFST-WGRDTFISLPGLLLS-PGRFEEARNILATFAGTQ-----------RHGLIPNELRD------G---EE--- 77 (370)
T ss_pred ccCccccc-cccHHHHHHHHHHhC-CCcHHHHHHHHHHHHHhh-----------hcCcccCcccC------C---CC---
Confidence 45699998 999999999998776 899999999999988763 38999998831 1 11
Q ss_pred CCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHHhcc-CCCCCcCCccccc----CCCCccccc
Q 035779 303 GGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLCL-SDGFDTFPTLLCA----DGCSMIDRR 375 (659)
Q Consensus 303 G~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~~~~-~dGf~~~p~Ll~~----Dg~~~mD~~ 375 (659)
.+|+++|+|||||+++++|+++|||.+|++ .|.++++|+|+.+-.. ..+.+...+|+.. ...+|||..
T Consensus 78 -----~~Y~s~Dat~wfl~~l~~Y~~~t~D~~~l~~~~~~i~~il~~~~~g~~~~~~~d~~~gl~~~~~~~~~~tWmD~~ 152 (370)
T PF06202_consen 78 -----PRYNSVDATLWFLIALQEYYRWTGDYSFLRELYPAIEEILEWYADGTDFGIRVDPEDGLIYSGNGLNNQTWMDAR 152 (370)
T ss_pred -----CCCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCeeecCCCCCCCCccccc
Confidence 235579999999999999999999999999 5899999999976322 0112211222222 247899964
Q ss_pred ------CCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhh
Q 035779 376 ------MGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHT 449 (659)
Q Consensus 376 ------m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~ 449 (659)
.||.|++||||||||+||+++++|++..+++ .++++++++++|+++|+++||++
T Consensus 153 ~~g~~~tpr~g~~vEIqal~y~AL~~~~~la~~~~~~--~a~~~~~~A~~lk~~F~~~FW~~------------------ 212 (370)
T PF06202_consen 153 NDGRPVTPRDGAAVEIQALWYNALRFAAELAEKFGDE--LAARYREWAERLKESFEKRFWDE------------------ 212 (370)
T ss_pred cCCccccCCCCcchHHHHHHHHHHHHHHHHHhhcCCc--hHHHHHHHHHHHHHHHHHHHcCC------------------
Confidence 3788999999999999999999999966443 78889999999999999999963
Q ss_pred hhcccccCCCCCCccccccccCCCceEEeeecCC-ccccccc-ccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCC
Q 035779 450 AVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPA-RMDFRWF-LVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMP 527 (659)
Q Consensus 450 A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~-~~d~Rif-alGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~G 527 (659)
+.||+.+.+++. ..|..+- +.+.+++|++++++++|+++++++|. ++|+||+|
T Consensus 213 ----------------------~~g~~~d~ld~~~~~d~~irpN~~~a~~L~~~~l~~~~a~~vl~~~~---~~L~tp~G 267 (370)
T PF06202_consen 213 ----------------------DRGYYADALDGDKEPDDSIRPNQLIALSLPPGLLDPEQAKKVLDRVE---EELLTPWG 267 (370)
T ss_pred ----------------------CCCEEEEEecCCCCCCcccccCchhHHhcCCccCCHHHHHHHHHHHH---HHcCCCCc
Confidence 345666666653 2332211 12223578899999999999999984 59999999
Q ss_pred cccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCCh-HH----HHHHHHHHHHHh---cCCCCCc
Q 035779 528 LKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRP-QI----AKRAIELAEQRL---SKDGWPE 599 (659)
Q Consensus 528 Lr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~-~~----A~~ll~~~~~~l---~~~~~pE 599 (659)
||+|+| .++.|+++|.+++..++.|||||+||||++++|+.|++|+|.. +. +..++..+.+++ ..+++||
T Consensus 268 lRTLs~--~~~~Y~p~y~g~~~~rd~sYHnGsvWpw~~g~~~~al~r~g~~~~~~~~~~~~ll~~~~~~~~~~~~~~lpE 345 (370)
T PF06202_consen 268 LRTLSP--SDPRYNPIYEGDQDSRDMSYHNGSVWPWDNGIYAEALLRYGFDEEEAIREAKSLLEGFEEHLQEFGLGRLPE 345 (370)
T ss_pred hhcccC--CCCCcCCCCCCccccCcccccCCCcCcCcHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHHhhccCCCcch
Confidence 999999 7899999999999999999999999999999999999999983 44 444555444444 4556899
Q ss_pred cccCCC-CCCCCCCCCccchHHHHHHHH
Q 035779 600 YYDGKT-GRYVGKQARKYQTWSIAGYLV 626 (659)
Q Consensus 600 ~fDG~~-g~p~G~~ac~~QAWSaA~~L~ 626 (659)
+|||.+ +.|.| |++||||+|++||
T Consensus 346 l~dg~~~~~p~g---c~~QAWS~a~ilr 370 (370)
T PF06202_consen 346 LFDGDPPHYPRG---CSPQAWSVAEILR 370 (370)
T ss_pred hcCCCCCCCCCC---CHHHHHHHHHhhC
Confidence 999876 34444 7899999999875
No 6
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.8e-47 Score=428.97 Aligned_cols=332 Identities=24% Similarity=0.315 Sum_probs=256.7
Q ss_pred cceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccc
Q 035779 212 PVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNS 291 (659)
Q Consensus 212 ~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p 291 (659)
-.+.+|..+ . ++||. +||||++||++|+|+. |++|+||++|++++++ ..+|+|||.|- .
T Consensus 269 g~~~~Ag~P-~--~~WF~-~fGRD~lIS~lgll~~--g~~elArg~L~~~a~~-----------~~~GkIPhe~~--~-- 327 (641)
T COG3408 269 GPGLYAGLP-I--AHWFS-PFGRDTLISALGLLLV--GRFELARGTLNTLARY-----------SEPGKIPHEIL--L-- 327 (641)
T ss_pred CcceEecCC-c--chhcc-ccchHHHHHHHHHHhc--CCHHHHHHHHHHHHhh-----------ccCCCCcchhh--h--
Confidence 345555542 1 25999 9999999999999997 9999999999999986 36899999871 0
Q ss_pred cccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHHhccCCCCCcCCccccc--C
Q 035779 292 HQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLCLSDGFDTFPTLLCA--D 367 (659)
Q Consensus 292 ~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~--D 367 (659)
..++. .+ |++||+++|||+++.+|+++|||..|++ ++.+..+++|+++..+.+ |+.+...+-. .
T Consensus 328 -------~~~~~-~~---Y~tvD~t~~~i~~~~~y~~~t~d~~~i~e~~~~v~~a~d~~~~~~~~~-~~~~~~~l~~~~~ 395 (641)
T COG3408 328 -------SIPGE-PY---YNTVDATPLFIYLLGAYLKYTGDTEFIRELWPSVGAALDWILKGFDFG-FDTYGDGLLEGGS 395 (641)
T ss_pred -------cCCCc-ce---eccCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcCCcc-ceecCcccccCCC
Confidence 11111 12 3479999999999999999999999999 699999999999876443 5554443322 4
Q ss_pred CCCccccc------CCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhc
Q 035779 368 GCSMIDRR------MGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRY 441 (659)
Q Consensus 368 g~~~mD~~------m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~ 441 (659)
..+|||+. +++.|.|||||+|||+|++++..++..++ ..+.++++.+.+++++++|++.||+. ..+
T Consensus 396 ~~tW~Ds~~~~~~~~~~~g~pi~i~al~~~~~~a~~~~a~ll~-~~~~~~~~~~~a~~l~~~F~~~fw~~-~~f------ 467 (641)
T COG3408 396 NQTWMDSGDDIFAVTPRAGKPVAINALQYYALKAALRLANLLG-DEEDAARLEKIARRLKESFEAKFWNP-TGF------ 467 (641)
T ss_pred CCCCeecCCccccccCCCCCceeHHHHHHHHHHHHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHhhCc-cch------
Confidence 67899975 47789999999999999999999998885 55567788888999999999999975 221
Q ss_pred cccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 035779 442 KTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWED 521 (659)
Q Consensus 442 ~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~ 521 (659)
...+.+. + ++ .++|+. ...+ ..+..||++++++ .|+++++ +.
T Consensus 468 -----~dl~~~~------------------~-~~---~~r~~~-----~~a~--~l~~~gi~~~~~~-~~~~l~e---~~ 509 (641)
T COG3408 468 -----YDLALDD------------------K-DV---PIRPNF-----SNAI--HLLYTGIVDPERA-VIIRLAE---ED 509 (641)
T ss_pred -----HhhhccC------------------C-Cc---ccCccc-----eecc--cccccccCchHHH-HHHHHHH---Hh
Confidence 1222110 0 11 112221 1111 1356778887776 7777775 59
Q ss_pred hhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChH-HHHHHHHHHHHHhcCCCCCcc
Q 035779 522 LIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQ-IAKRAIELAEQRLSKDGWPEY 600 (659)
Q Consensus 522 Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~-~A~~ll~~~~~~l~~~~~pE~ 600 (659)
|+||+|||+++| .+|.|+|.+||||+||||++|+|+.|+.|+|..+ ++.+.++.+......+++||+
T Consensus 510 lltp~GlRTLS~------------~dp~Y~p~yYH~GtVWP~~~gifv~g~~r~G~~~~~~~~~~~~~~~~a~~~~~pE~ 577 (641)
T COG3408 510 LLTPWGLRTLSP------------DDPRYNPMYYHNGTVWPHDTGIFVLGLRRYGLKDIQALELFDGLFSSASPGRIPEL 577 (641)
T ss_pred ccCCccccccCC------------CCCCcCCCcccCCCcccchHHHHHHHHHHcCcccHHHHHHHHHHhhhcccCCCccc
Confidence 999999999999 3788999999999999999999999999999888 777777777666677788999
Q ss_pred ccCCCCC-CCCCCCCccchHHHHHHHH--HHHHhc-CCChh
Q 035779 601 YDGKTGR-YVGKQARKYQTWSIAGYLV--AKMMVE-NPSNL 637 (659)
Q Consensus 601 fDG~~g~-p~G~~ac~~QAWSaA~~L~--a~~lL~-~P~~~ 637 (659)
|||..+. |.| |.+||||+|++|+ ++.+|+ .|...
T Consensus 578 f~g~~~~~P~g---c~~QAWS~a~~l~~~~~~~lg~~p~~~ 615 (641)
T COG3408 578 FDGDSPNRPKG---CYPQAWSSAEILRSLLQGLLGIKPDGF 615 (641)
T ss_pred ccccCCCCCCC---cchhhhhHHHHHHHHHHHHhCCCcCcc
Confidence 9998866 766 6899999999886 467888 88765
No 7
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=100.00 E-value=6.4e-47 Score=425.37 Aligned_cols=262 Identities=20% Similarity=0.228 Sum_probs=209.7
Q ss_pred ccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCC
Q 035779 224 EALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFG 303 (659)
Q Consensus 224 ~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG 303 (659)
+-+||. +||||+|||++|+++. +|+++.||++|+++++.+ .+|+|||.| +..+ .+
T Consensus 287 GypwF~-~WGRDt~Isl~Gl~l~-tgr~~~A~~iL~~fa~~~-----------~~GliPN~~-----~~~g---~~---- 341 (575)
T TIGR01561 287 GYHWFD-DWGRDSFISLEGLLLI-DKQFDEAKEAILKFANLC-----------KRGLIPNNF-----IAFG---GD---- 341 (575)
T ss_pred cCchhc-cchhHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHh-----------HCCCCCCcc-----CCCC---CC----
Confidence 347886 5999999999999997 899999999999999863 589999988 2111 11
Q ss_pred CCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHHhccCCCCCcC--C-ccc-ccCCCCccccc--
Q 035779 304 GSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLCLSDGFDTF--P-TLL-CADGCSMIDRR-- 375 (659)
Q Consensus 304 ~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~~~~~dGf~~~--p-~Ll-~~Dg~~~mD~~-- 375 (659)
..|++||+|||||+++++|+++|||.++++ .|.++.+|+++.+ .+||..+ . +|+ .+...+|||++
T Consensus 342 ----p~YntvDAtLWfi~al~~Y~~~tgD~~~l~~l~p~l~~ii~~y~~---G~~~~i~~d~dGLi~~g~~lTWMDa~~g 414 (575)
T TIGR01561 342 ----PIYNGVDASLWAIHAIDKTFAYSQDFLFIRDVVDKVLDIIDNYCA---GNDFAIGMDNDLIFHKGAPLTWMDAKVD 414 (575)
T ss_pred ----ccCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhc---CCCcEEEECCCccEeCCCCCCCCCCCCC
Confidence 234579999999999999999999999987 5766666665543 3344321 1 333 23446899974
Q ss_pred ----CCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhh
Q 035779 376 ----MGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAV 451 (659)
Q Consensus 376 ----m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~ 451 (659)
+||.|+|||||||||+||+.+++|++.+++. +..+.+.+++|+++|++.||++..
T Consensus 415 ~~~~tPR~G~~VEInALwYnAL~~~a~la~~~g~~---a~~y~~~A~~lk~~F~~~FW~~~~------------------ 473 (575)
T TIGR01561 415 ERAVTPRAGAACEINALWYNALKTAEFLGNELGED---AESLEEKAAGVAKNFAEKFINPDG------------------ 473 (575)
T ss_pred CccCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHHhcCCCCC------------------
Confidence 5899999999999999999999999988432 456778888899999999997543
Q ss_pred cccccCCCCCCccccccccCCCceEEee--------------ecCCcccccccccchhHHHhcCCCCHH-HHHHHHHHHH
Q 035779 452 NKFNVIPDSIPDWVFDFMPLRGGYLIGN--------------VSPARMDFRWFLVGNCIAILSSLATPA-QATAIMDLIE 516 (659)
Q Consensus 452 nkfni~~~~iP~wl~~w~~~~GGYl~g~--------------v~P~~~d~RifalGN~LALlsgll~~e-qa~~Vl~~V~ 516 (659)
||+++. ++|++ +|+ +++++++++++ ++++|++.|.
T Consensus 474 ----------------------g~l~D~v~~d~~~~~~~d~s~RPNq----l~A----~sL~~~ll~~~~~~~~vl~~v~ 523 (575)
T TIGR01561 474 ----------------------NCLFDLIHQDEAGNQVKDKAIRPNQ----IFA----ISLPFPIIDDESIAKAILDLIE 523 (575)
T ss_pred ----------------------CeeEEEEecCCCCCcccccccCCCc----eeH----hhCCCCCCCHHHHHHHHHHHHH
Confidence 333333 34443 333 35678999999 9999999885
Q ss_pred HHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHH
Q 035779 517 ERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASI 573 (659)
Q Consensus 517 ~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~ 573 (659)
++|+||+|||+|+| .+++|+++|.|++..|+.|||||+||||++|+|+.|++
T Consensus 524 ---~~Lltp~GlRTLsp--~d~~Y~p~Y~g~~~~Rd~aYHqGtvWpwl~G~y~~A~l 575 (575)
T TIGR01561 524 ---KDLLRPFGLKSLSR--DDPLYKGQYKGDALSRDTAYHNGSLPPWLHGALVKARL 575 (575)
T ss_pred ---hhccCCcccccCCC--CCCCcCCCCCCCccccCCcCcCCCcCccchhhHHhhcC
Confidence 59999999999999 78999999999999999999999999999999999863
No 8
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=100.00 E-value=2.7e-46 Score=441.99 Aligned_cols=347 Identities=15% Similarity=0.226 Sum_probs=253.0
Q ss_pred ccCCCC----CCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccc
Q 035779 224 EALNYN----QVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLV 299 (659)
Q Consensus 224 ~~~nY~----~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~ 299 (659)
+-+||. .+||||+|||++|+++. +|+++.||++|+++++. ...|+|||.|. .| ..
T Consensus 1026 GyPwF~tg~mr~WGRDTfISLrGLlL~-tGR~~eAk~ii~~fa~~-----------lr~GLIPNll~------~G---~~ 1084 (1464)
T TIGR01531 1026 GLPHFSVGYMRCWGRDTFIALRGMLLT-TGRFDEARAIILAFAGT-----------LRHGLIPNLLD------EG---IN 1084 (1464)
T ss_pred cCCccccCcccccchhheeecCcceec-cCCHHHHHHHHHHHHHH-----------HHcCCCCCCCC------CC---Cc
Confidence 346776 89999999999999887 99999999999999975 46899999881 11 11
Q ss_pred cCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCC-hhhhc------------------------cHHHHHHHHHHHH----
Q 035779 300 ADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRD-YALAE------------------------LPEVQRGMKLILN---- 350 (659)
Q Consensus 300 ~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD-~sfl~------------------------~p~vq~aL~~Il~---- 350 (659)
.+|+++||++|||.++++|++.++| .++++ .+.++.+|+++.+
T Consensus 1085 --------prYNt~DA~lWfi~AIqdY~~~~~dg~~iL~~~v~R~fp~Ddt~~~~~~~~~~~l~~~iqeIl~~h~~G~~f 1156 (1464)
T TIGR01531 1085 --------PRYNCRDAAWFWLQCIQDYVEIVPNGEKILKDPVRRIYPDDDSIPVDDGRADQYLFEVIYEALQKHFQGIQF 1156 (1464)
T ss_pred --------ccccCccHHHHHHHHHHHHHHHcCCHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHcCCcc
Confidence 3467899999999999999999999 45522 2355666665553
Q ss_pred -----------hccCCCCC-----c-CCcccccC----CCCccc-------------ccCCCCCCchhhHHHHHHHHHHH
Q 035779 351 -----------LCLSDGFD-----T-FPTLLCAD----GCSMID-------------RRMGIYGYPIEIQSLFYFALRCA 396 (659)
Q Consensus 351 -----------~~~~dGf~-----~-~p~Ll~~D----g~~~mD-------------~~m~r~G~PVEIQALwY~ALr~a 396 (659)
.+.++||. . ..+|+.+. ..|||| ..+||.|+|||||||||+||+.+
T Consensus 1157 RE~NAGp~iD~~M~deGfn~~I~vD~~~GLI~gGn~~ncgTWMDkmg~SekA~~~G~p~TPRdG~aVEInaLwynAL~~~ 1236 (1464)
T TIGR01531 1157 RERNAGPQIDRVMTDEGFNVTIGVDWETGFIYGGNRFNCGTWMDKMGESEKAGNKGIPATPRDGAAVEIVGLLKSALRFL 1236 (1464)
T ss_pred ccccccccchhhhccccccceEEEcCCCCcEecCCCCCCCCCcCCCCcccccccCCcccCCCCCCceeHHHHHHHHHHHH
Confidence 11123652 1 22333332 359999 23599999999999999999999
Q ss_pred HHhcccC----CCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCC
Q 035779 397 RQMLKPE----RDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLR 472 (659)
Q Consensus 397 aeLa~~~----~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~ 472 (659)
.+|++.. .+.......+.+.++.++++|++.||+.... .-.|+.. ..-+|+-.||.|..+. .
T Consensus 1237 ~~l~~~~~~~~~g~~~~~~~~~~wa~~ik~~Fe~~F~~~~~~-~~lyDv~-----~~~vnrrgIykD~~~s--------~ 1302 (1464)
T TIGR01531 1237 IELKEKGVFKRSGVETQKWSYIEWNQKIQDNFEKRFFVDESQ-DADYDVA-----KLGVNRRGIYKDSYGS--------T 1302 (1464)
T ss_pred HHHHHhcCcCcCCcccchhhHHHHHHHHHHHHhhhcCCCccc-Ccccccc-----chhhccccccccccCC--------C
Confidence 9999753 1222122345666777899999999984321 0122221 1224555566655331 1
Q ss_pred CceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCC
Q 035779 473 GGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTR 552 (659)
Q Consensus 473 GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP 552 (659)
.+|-...++|++ +++ +++.+.++++++++++++.+ + +|+||+|||+|+| .+++|+++|.++...++
T Consensus 1303 ~~~~D~qlRPN~----~iA----~sla~~l~~~~~a~~~L~~v-~---~LltP~GlRTLdP--~D~~Y~g~Y~g~~dsrD 1368 (1464)
T TIGR01531 1303 KPWTDYQLRPNF----AIA----MTVAPELFVPEKAWKALTIA-E---VLLGPLGMKTLDP--SDWNYRGYYNNGEDSDD 1368 (1464)
T ss_pred CCCCCcccCCCc----eEE----EeCCcccCCHHHHHHHHHHH-H---HhccCCccccCCC--CCcCCCCccCCchhhcc
Confidence 233334577774 455 46789999999999999998 4 7999999999999 89999999999999888
Q ss_pred c------ccccCCcchhhHHHHHHHHHHcCCh----H------HHHHHHHHHHHHhcCCC---CCccccCCCCCCCCCCC
Q 035779 553 W------SYHNGGSWPVLLWLLTAASIKTGRP----Q------IAKRAIELAEQRLSKDG---WPEYYDGKTGRYVGKQA 613 (659)
Q Consensus 553 ~------SYHNGgVWP~llg~~~~Al~k~G~~----~------~A~~ll~~~~~~l~~~~---~pE~fDG~~g~p~G~~a 613 (659)
. +||||++|||++|+|+.|++|.+.. . .+.+.+..+..++...+ +||+|||+.+ +.+ .+
T Consensus 1369 ~~t~kg~aYHqG~eW~WllG~fl~A~lk~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~g~l~El~dgdgp-~~~-~g 1446 (1464)
T TIGR01531 1369 FATAKGRNYHQGPEWVWPIGYFLRARLHFHFKTGPRCQAAAIKPVSYLLQQLYYHLKESPWRGLPELTNKDGE-YCN-DS 1446 (1464)
T ss_pred ccccccccccCCCcCccchhHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCCC-CCC-CC
Confidence 7 9999999999999999999997532 1 23444555666676655 6999999762 222 24
Q ss_pred CccchHHHHHHHHHHH
Q 035779 614 RKYQTWSIAGYLVAKM 629 (659)
Q Consensus 614 c~~QAWSaA~~L~a~~ 629 (659)
|..||||+|++|++.+
T Consensus 1447 c~aQAWSvaelLr~l~ 1462 (1464)
T TIGR01531 1447 CPTQAWSVACLLELLY 1462 (1464)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 7999999999998754
No 9
>PRK10137 alpha-glucosidase; Provisional
Probab=100.00 E-value=3.6e-32 Score=312.76 Aligned_cols=347 Identities=16% Similarity=0.103 Sum_probs=258.4
Q ss_pred CCcccCCCCC--CchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhcccccccccccc-CCCccCCcceecccccccccc
Q 035779 221 PNAEALNYNQ--VFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTL-GEGVMPASFKVLFNSHQQKET 297 (659)
Q Consensus 221 ~~~~~~nY~~--vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~-~~GliP~~fki~h~p~~~~e~ 297 (659)
|+++.+||.. .|+||+.+.+++++. .+||.|++.|+++++.|++. .|++++ ++|+||+.+ .|++ +
T Consensus 335 Ps~gl~Wf~~~~~W~WDS~~~A~~la~---fdpelA~~~lr~Lf~~Q~~~--~d~~r~~~~G~Iph~v--f~~~--~--- 402 (786)
T PRK10137 335 PSVTARWFSGNQTWPWDTWKQAYAMAH---FNPDVAKENIRAVFSWQIQP--DDSVRPQDVGFVPDLI--AYNL--S--- 402 (786)
T ss_pred eCCCCCCCCCCCccchHHHHHHHHHhh---cCHHHHHHHHHHHHHhhccc--cCCCCcCCCCeeeEEe--ccCC--C---
Confidence 5677899999 999999999999999 79999999999999999886 578875 589999944 3432 1
Q ss_pred cccCCCCCCCCCcCCCC-cHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHHhccC--CCCCcCCcc---------
Q 035779 298 LVADFGGSAIGRVAPVD-SGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLCLS--DGFDTFPTL--------- 363 (659)
Q Consensus 298 ~~~dfG~~aiG~v~sVD-atLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~~~~~--dGf~~~p~L--------- 363 (659)
...+|+. ++.++.. .++.+.+++++++++|||.+|++ .|++.+..+|+.+..+. +|+.+|..-
T Consensus 403 -p~R~g~~--~~~ne~~tqPPL~a~av~~vy~~t~d~~fl~~lyPkL~a~h~Ww~~~RD~dg~Gl~eY~~~~~~~h~~~~ 479 (786)
T PRK10137 403 -PERGGDG--GNWNERNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTES 479 (786)
T ss_pred -ccccccc--ccccCCCcCcCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCCCCceeEeeccccccccccc
Confidence 1122321 2333333 35899999999999999999999 69999999999998754 488876321
Q ss_pred ---------------------------------------cccCCCCccc---ccC-------C-----------------
Q 035779 364 ---------------------------------------LCADGCSMID---RRM-------G----------------- 377 (659)
Q Consensus 364 ---------------------------------------l~~Dg~~~mD---~~m-------~----------------- 377 (659)
....|.+-|| ++- +
T Consensus 480 g~~~~~i~~~~~~~~~~G~~n~~~~~~~~~~~~~~~~~~~~~~WESGmDNap~f~~i~~~~~~~y~r~~y~r~~~~V~~~ 559 (786)
T PRK10137 480 GEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFA 559 (786)
T ss_pred cccccccccccccccccccccccccccccccccccccccccCCCCCCCCCccccccccccccchhhhccccccceeeeeh
Confidence 1234555555 000 0
Q ss_pred ----CCC---------CchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhcccc
Q 035779 378 ----IYG---------YPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTE 444 (659)
Q Consensus 378 ----r~G---------~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te 444 (659)
..| .+|++|++.|.+.+.+++|++.+ |+.+.+++++++++.|++.|++.||++..++. |++
T Consensus 560 ~~~~~dg~l~~~p~~~e~VDLNsyLy~a~~~LA~LAe~L-G~~e~A~~~~~~A~~Lr~aIn~~~WDee~GfY--~Dy--- 633 (786)
T PRK10137 560 ENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATIL-GKPEEAKRYRQLAQQLADYINTCMFDETTGFY--YDV--- 633 (786)
T ss_pred hcccCCCCccCCCCcCCCHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHccCCcCCeE--EEE---
Confidence 112 26899999999999999999999 66788999999999999999999998765521 011
Q ss_pred chhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q 035779 445 EYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIG 524 (659)
Q Consensus 445 ~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Llt 524 (659)
.++. .. .-....|-++ ..+.+..+++++|++|+++++|+++|++.+.. -..+.+
T Consensus 634 -----dL~~-----~~-------~~~~~~g~~i--------~~~~~~~agf~PLwaGia~~eqA~~VV~~L~~-p~~F~t 687 (786)
T PRK10137 634 -----RIED-----KP-------LANGCAGKPI--------VERGKGPEGWSPLFNGAATQANADAVVKVMLD-PKEFNT 687 (786)
T ss_pred -----ecCc-----cc-------ccccccCcce--------eeeccCccchhhccCCCCCHHHHHHHHHHhcC-hhhcCC
Confidence 1000 00 0000000000 11234566778999999999999999999864 135667
Q ss_pred CCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHH----HhcCCCCCcc
Q 035779 525 EMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQ----RLSKDGWPEY 600 (659)
Q Consensus 525 p~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~----~l~~~~~pE~ 600 (659)
++|++++++ .+|.+.|..||+|.|||+++++++.||.++|+.++|.++...+.+ ....+.+-|+
T Consensus 688 ~~GipTlS~------------s~p~ydp~~YWRGpVWpp~N~Li~~GL~rYG~~e~A~~La~~ll~~a~~l~~tG~~~E~ 755 (786)
T PRK10137 688 FVPLGTAAL------------TNPAFGADIYWRGRVWVDQFYFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQEN 755 (786)
T ss_pred CCCccCcCC------------CccccCCCCCCCCCcCHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCceEEe
Confidence 788888887 356788889999999999999999999999999999988887643 4456779999
Q ss_pred ccCCCCCCCCCCCCccchHHHHHHHHHHH
Q 035779 601 YDGKTGRYVGKQARKYQTWSIAGYLVAKM 629 (659)
Q Consensus 601 fDG~~g~p~G~~ac~~QAWSaA~~L~a~~ 629 (659)
||..+|.+.|. ..++||+|.+|+++.
T Consensus 756 YDp~TGeg~Ga---~~FSWTAAvlLml~~ 781 (786)
T PRK10137 756 YNPLTGAQQGA---PNFSWSAAHLYMLYN 781 (786)
T ss_pred ECCCCCcccCC---CCCChHHHHHHHHHH
Confidence 99999877665 477999999886653
No 10
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=2.3e-25 Score=251.48 Aligned_cols=344 Identities=19% Similarity=0.292 Sum_probs=228.9
Q ss_pred CCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCC
Q 035779 226 LNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGS 305 (659)
Q Consensus 226 ~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~ 305 (659)
.+|..|||||+||++.|+|+. ||++..||++++.|++- ...|+|||-.- .|
T Consensus 1077 vg~mRcWGRDtFIaLrG~ll~-TGRy~EAr~iIlaFa~t-----------lrHGLIPNLLd------~G----------- 1127 (1521)
T KOG3625|consen 1077 VGIMRCWGRDTFIALRGILLI-TGRYVEARNIILAFAGT-----------LRHGLIPNLLD------EG----------- 1127 (1521)
T ss_pred hhhhhhcccceeeecccceEe-ecchHHHHHHHHHHHHH-----------hhccccchhhh------cc-----------
Confidence 488899999999999999887 89999999999999873 46899999551 11
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHcCCh-hhhc------------------------cHHHHHHHHHHHH----------
Q 035779 306 AIGRVAPVDSGFWWIILLRSYTKCTRDY-ALAE------------------------LPEVQRGMKLILN---------- 350 (659)
Q Consensus 306 aiG~v~sVDatLWfIill~~Y~~~TGD~-sfl~------------------------~p~vq~aL~~Il~---------- 350 (659)
.+.|||.-||..||+.++++|+....+- .+++ .+.++.||+-..+
T Consensus 1128 ~~~RyNcRDA~W~wl~~Iq~Yve~vPnG~~ILkd~VsRiyP~DDs~v~~pgaf~q~L~evi~Eal~kH~qGiqfRErnAG 1207 (1521)
T KOG3625|consen 1128 IYARYNCRDAVWWWLQCIQDYVEMVPNGLDILKDPVSRIYPTDDSAVLPPGAFDQPLFEVIQEALQKHFQGIQFRERNAG 1207 (1521)
T ss_pred ccccccchHHHHHHHHHHHHHHHhCCChhhhhhCchheeCCCCCcccCCCchhhHHHHHHHHHHHHHHhccccchhccCC
Confidence 2345667799999999999999876432 2222 0345555554432
Q ss_pred -----hccCCCCCcC------CcccccC----CCCcccccC--------------CCCCCchhhHHHHHHHHHHHHHhcc
Q 035779 351 -----LCLSDGFDTF------PTLLCAD----GCSMIDRRM--------------GIYGYPIEIQSLFYFALRCARQMLK 401 (659)
Q Consensus 351 -----~~~~dGf~~~------p~Ll~~D----g~~~mD~~m--------------~r~G~PVEIQALwY~ALr~aaeLa~ 401 (659)
.+.+.||... .+++.+. +.+||| +| ||.|..||||+|-|.|||.+.+|.+
T Consensus 1208 pqiD~~M~DeGFnv~~gV~~~TGfv~GGn~~NCGTWMD-KMGeSerAgnkG~PaTPRDGsAVEi~GL~~salrfl~elke 1286 (1521)
T KOG3625|consen 1208 PQIDRNMKDEGFNVTAGVDEETGFVYGGNRFNCGTWMD-KMGESERAGNKGIPATPRDGSAVEIVGLSKSALRFLLELKE 1286 (1521)
T ss_pred cccchhhhccCcceeeccccccceeecCCccccchhhh-hcccchhccCCCCCCCCCCCceeehhhhHHHHHHHHHHHHh
Confidence 1222366421 1122222 357999 44 7788899999999999999999987
Q ss_pred cC-----C------C--ChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCcccccc
Q 035779 402 PE-----R------D--GKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDF 468 (659)
Q Consensus 402 ~~-----~------~--~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w 468 (659)
.. + | .+-...+| ..+++.+|.+.|.+++...... +=...-+||--||.|+...
T Consensus 1287 k~ifpy~~Ve~k~~g~~~k~s~~eW---~qkiqdNFeK~ffV~ed~s~~~------~~~~~~vnkr~IykDsyga----- 1352 (1521)
T KOG3625|consen 1287 KNIFPYHGVEVKRHGKAIKWSYDEW---NQKIQDNFEKLFFVSEDPSDLN------EKHPNLVNKRGIYKDSYGA----- 1352 (1521)
T ss_pred cCCccccceEEecccccceecHHHH---HHHHHhhhhheecccCCcchhh------hhcccccchhheecccccC-----
Confidence 41 0 1 11123444 4457899999999987652110 1112335666676666321
Q ss_pred ccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCC-
Q 035779 469 MPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYD- 547 (659)
Q Consensus 469 ~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gd- 547 (659)
..+|-.--++|+ |.. .+.+.-.+.+++.|-+.++..++ .|++|.|||+|.| +|..|++.|--+
T Consensus 1353 ---t~~~tDyQLR~N------F~I--amtVAPeL~~pe~A~kAle~Aek---vLlGPlGMkTlDP--~D~nYr~yYdN~~ 1416 (1521)
T KOG3625|consen 1353 ---TSPWTDYQLRPN------FTI--AMTVAPELFTPEKAWKALEIAEK---VLLGPLGMKTLDP--DDWNYRGYYDNAL 1416 (1521)
T ss_pred ---CCCccceeccCC------cee--EEEechhhcChHHHHHHHHHHHH---HhcCcccccccCh--hhcccccccCCCc
Confidence 112221223343 111 13455677899999999998764 8999999999999 788999988322
Q ss_pred ---CCC--CCcccccCCcchhhHHHHHHHHHHcCC----hHHHHH------HHHHHHHHhcCC---CCCccccCCCCCCC
Q 035779 548 ---PKN--TRWSYHNGGSWPVLLWLLTAASIKTGR----PQIAKR------AIELAEQRLSKD---GWPEYYDGKTGRYV 609 (659)
Q Consensus 548 ---p~~--rP~SYHNGgVWP~llg~~~~Al~k~G~----~~~A~~------ll~~~~~~l~~~---~~pE~fDG~~g~p~ 609 (659)
-.+ .-+-||||.-|-|+.|+|..|-+..++ ...++. .+.+...++... ++||+-. ..|.+.
T Consensus 1417 Ds~d~~takG~NYHQGPEWlw~~GyfLrArl~f~~k~gp~~~~y~i~qv~~rL~~h~k~l~~S~WrgLpELTN-~ngeyC 1495 (1521)
T KOG3625|consen 1417 DSDDYNTAKGFNYHQGPEWLWPIGYFLRARLYFSRKMGPETTAYTIVQVKNRLSRHYKHLERSPWRGLPELTN-ENGEYC 1495 (1521)
T ss_pred cccchhhhccccccCCCceeehhHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhccccCchhhcc-CCcCcc
Confidence 111 446899999999999999999888643 122222 222233445433 3699876 445665
Q ss_pred CCCCCccchHHHHHHHHHHHHh
Q 035779 610 GKQARKYQTWSIAGYLVAKMMV 631 (659)
Q Consensus 610 G~~ac~~QAWSaA~~L~a~~lL 631 (659)
+ .||.-||||+|.+|-+.+-|
T Consensus 1496 ~-dSc~tQAWSvacile~~ydL 1516 (1521)
T KOG3625|consen 1496 P-DSCETQAWSVACILETLYDL 1516 (1521)
T ss_pred c-ccchHhHHHHHHHHHHHHHH
Confidence 4 36999999999988655443
No 11
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.89 E-value=3.7e-21 Score=219.74 Aligned_cols=331 Identities=18% Similarity=0.182 Sum_probs=230.4
Q ss_pred HHHHHHHhhhccc---cCcc-ceeeccCCCC-cccC--CCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhcccc
Q 035779 196 EALERLKKSYVYF---KGKP-VGTFAAMDPN-AEAL--NYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWE 268 (659)
Q Consensus 196 ~a~~~l~~s~v~~---~~~~-~Gt~Aa~d~~-~~~~--nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~ 268 (659)
.-|+++++|+..+ ...+ =+.|||.+.+ .... .|.-+|.||+..++.+++.. |.++.|+.+|..+++.|..
T Consensus 253 ~~~~~~~~Sll~Lk~~~~~~~GaiiAs~s~~~~~~~~~~Y~y~W~RD~~~~a~Al~~~--G~~~~a~~~l~~l~~~q~~- 329 (616)
T TIGR01577 253 KIYSLYRRSLAVLRLLTDGEYGSMIAAPEFDEDFVRCGGYAYCWGRDASYIATALDRA--GYHDRVDRFFRWAMQTQSR- 329 (616)
T ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEcCCCCcccccCCCCceeccccHHHHHHHHHHC--CCHHHHHHHHHHHHHhhCc-
Confidence 5567888885544 2222 2466665321 1112 38899999999999999997 9999999999999988753
Q ss_pred ccccccccCCCccCCcceeccccccccccccc-CCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHH
Q 035779 269 KRIDNFTLGEGVMPASFKVLFNSHQQKETLVA-DFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGM 345 (659)
Q Consensus 269 ~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~-dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL 345 (659)
+|..+..+.+ +|+ ..+ .++ ...|.+-..++++++|++.|||.+|++ ++.+++++
T Consensus 330 ---------~G~~~~~~~~-----dG~--~~~~~~~-------~Q~D~~g~~l~al~~y~~~t~d~~~~~~~~~~v~~a~ 386 (616)
T TIGR01577 330 ---------DGSWQQRYYL-----NGR--LAPLQWG-------LQIDETGSILWAMDQHYRLTNDRAFLEEIWESVQKAA 386 (616)
T ss_pred ---------CCCcceEEec-----CCC--CCCCCCC-------ccccchhHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 5655654421 121 111 111 135766677889999999999999988 68999999
Q ss_pred HHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHH
Q 035779 346 KLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQ 425 (659)
Q Consensus 346 ~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~ 425 (659)
+++.+.... +. + .++-.-|- .+.|..+++++++|.||+++++|++.+ ++.+.++++++.++.+++.|+
T Consensus 387 ~fl~~~~~~-~l---~---~~~~~lWE----er~G~~~~t~a~~~aAL~~aa~lA~~l-Gd~~~a~~~~~~Ad~ik~~i~ 454 (616)
T TIGR01577 387 QYLILFIDP-ET---P---LPCRDLWE----EREGVFTYTASAVYGGLDAAAAVADKL-GEKRLAQNWKKAAEFIKRAVE 454 (616)
T ss_pred HHHHHhccC-CC---C---CCCCccce----ecCCccCccHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHH
Confidence 999986532 21 1 12222233 357889999999999999999999998 555778899999999999999
Q ss_pred HhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCC----cccccccccchhHHHhcC
Q 035779 426 KYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPA----RMDFRWFLVGNCIAILSS 501 (659)
Q Consensus 426 ~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~----~~d~RifalGN~LALlsg 501 (659)
++||.++ +|+++..+++. .+|..++. +++.+|
T Consensus 455 ~~~w~~~----------------------------------------~g~F~~~~~~~~~~~~vDaSlL~----l~~~~g 490 (616)
T TIGR01577 455 ERFWLPE----------------------------------------RQVFAKGIKLMVLDKTIDISILG----ISVPFN 490 (616)
T ss_pred HhccCCC----------------------------------------CCEEEEeecCCCCCCcccHHHHh----HHHhcC
Confidence 9999643 33444444321 12321111 334589
Q ss_pred CCCHHHHHHH--HHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChH
Q 035779 502 LATPAQATAI--MDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQ 579 (659)
Q Consensus 502 ll~~eqa~~V--l~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~ 579 (659)
+++++..+.+ ++.|++ +|.+|- +.+| .| |..-.|+.|+.|.-...+++.++++.|+.+
T Consensus 491 ~l~~~Dpr~v~Tv~~I~~---~L~~~~----------~ggi-~R------Y~~D~y~~g~~w~i~T~wla~~~~~~g~~~ 550 (616)
T TIGR01577 491 LIAPDDERMVKMAEAIEK---HLTSPI----------VGGI-KR------YENDPYVGGNPWILTTLWLSQLYIKQGRIL 550 (616)
T ss_pred CCCCCChHHHHHHHHHHH---HhcccC----------CCee-eC------CCCCCCCCCCcHHHHHHHHHHHHHHhcccc
Confidence 8887655444 777753 565321 1111 12 222256779999999999999999999765
Q ss_pred -------------HHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHHHHHh
Q 035779 580 -------------IAKRAIELAEQRLSKDG-WPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMV 631 (659)
Q Consensus 580 -------------~A~~ll~~~~~~l~~~~-~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL 631 (659)
+|.++++.+..+....+ +||=+|..+|.|.|- .|||||-++++.+...|
T Consensus 551 ~~~~~~~~~~~~~~A~~ll~~~~~~~~~~Gll~Eqvd~~~g~~~g~---~Pl~wSHa~~i~a~~~l 613 (616)
T TIGR01577 551 KALNHNGADIYLQKSKKLLKWVMDHRTDLGLLPEQVDKETGKPAWA---VPLGWSHAMFLLTVLDL 613 (616)
T ss_pred cccccchhhhHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCCCCc---CCcccchHHHHHHHHHH
Confidence 78888888777655545 799999999999884 79999999999765443
No 12
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.9e-19 Score=206.95 Aligned_cols=337 Identities=18% Similarity=0.206 Sum_probs=248.7
Q ss_pred hhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCC
Q 035779 234 RDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPV 313 (659)
Q Consensus 234 RDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sV 313 (659)
||..=-.+.+++. +|+.+|..|+.+++.|=. +|-.|+.|- |+.. .... + +...-
T Consensus 615 RD~~Qd~l~f~~~---~p~~aR~qIl~~as~Qf~----------eGd~~hWf~----p~t~-ag~q-------i-r~~~s 668 (1056)
T COG3459 615 RDQLQDTLEFLLA---RPALARKQILDAASRQFV----------EGDVQHWFL----PDTY-AGVQ-------I-RTSIS 668 (1056)
T ss_pred ccccccchhhhhc---CHHHHHHHHHHHHhhccc----------CCCcccccc----cccc-ccch-------h-hcccC
Confidence 8888778888885 799999999888886532 477788772 2211 0000 0 11235
Q ss_pred CcHHHHHHHHHHHHHHcCChhhhcc---------------------HHHHHHHHHHHHhccCCCCCcCCcccccCCCCcc
Q 035779 314 DSGFWWIILLRSYTKCTRDYALAEL---------------------PEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMI 372 (659)
Q Consensus 314 DatLWfIill~~Y~~~TGD~sfl~~---------------------p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~m 372 (659)
|.-+|.+.++..|++.|||.++++. +||++||+.+.... |-.++|.++.+||.+.|
T Consensus 669 DdvvWl~~a~~~Yl~~TGD~aILdE~iPf~~~~~l~~~s~e~~TLyEH~~rAld~av~r~---g~~glpli~gGDWND~l 745 (1056)
T COG3459 669 DDVVWLLKAIADYLKETGDAAILDEVIPFIDGPALPEFSKEQATLYEHCARALDLAVARL---GPHGLPLILGGDWNDGL 745 (1056)
T ss_pred CceeeeHHHHHHHHHhcCcHhhhhccccccCCCccccccccchhHHHHHHHHHHHHHHhc---CCCCcccccCCcccccc
Confidence 9999999999999999999999873 69999999999766 33455666679999988
Q ss_pred cc-cCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhh
Q 035779 373 DR-RMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAV 451 (659)
Q Consensus 373 D~-~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~ 451 (659)
.+ -.+..|..|-+--+.+.+|+...+|++.. ++.+.+..+.+-++++++.+.++-|+ ++|+.+.|..
T Consensus 746 n~vg~~g~geSv~lgW~l~~tlq~F~~lak~r-~d~~r~~~~~~~~ea~~~~~~~~~wD-g~wy~r~~~d---------- 813 (1056)
T COG3459 746 NLVGNGGKGESVWLGWFLALTLQTFKELAKAR-GDEARADTWAKHVEALREALETNGWD-GEWYRRGYGD---------- 813 (1056)
T ss_pred cccccCCccceeehhhHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHhcCCC-cceEEecccc----------
Confidence 85 22445788999999999999999999988 56677899999999999999999995 6664332211
Q ss_pred cccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccc
Q 035779 452 NKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKIS 531 (659)
Q Consensus 452 nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l 531 (659)
.|-++ | +|.....||+.+++.||++||..+++|+.+.|+.|++ +|+.|+|+|++
T Consensus 814 --------------------~g~~l-g--s~e~~E~qI~~i~qs~sVlSg~gd~~ra~kaMd~v~k---~L~~pdgvrL~ 867 (1056)
T COG3459 814 --------------------DGTPL-G--SPEDEECQIDSIPQSWSVLSGEGDKERAEKAMDSVMK---YLVDPDGVRLF 867 (1056)
T ss_pred --------------------CCCcc-c--CCCCcccceeeeccchhhhhCCCChHHHHHHHHHHHH---hccCccccEec
Confidence 12121 2 3445556899999999999999999999999999975 99999999999
Q ss_pred cCCCCCC--CceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHH--HHHh-----------cCCC
Q 035779 532 YPALDGH--EWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELA--EQRL-----------SKDG 596 (659)
Q Consensus 532 ~Pa~~d~--~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~--~~~l-----------~~~~ 596 (659)
.|+++.. +=+-+.+..|..| .||+...|-+-+++.|++|.|+.++|.+.+..+ ..+- ++|.
T Consensus 868 tppf~~~~~~~gyiK~y~pgvR----EnGgQYtHa~~w~i~Alak~G~a~eAw~~f~~inPvn~~~~~~~ae~~rvepYv 943 (1056)
T COG3459 868 TPPFSYTKGDPGYIKRYPPGVR----ENGGQYTHAATWVILALAKMGRADEAWELFDKINPVNHAESVPNAETYRVEPYV 943 (1056)
T ss_pred CCcccccCCCCCeeecCCcccc----cccceeecccHHHHHHHHhhccHHHHHHHHHhcCCcchhccccchhheeeccee
Confidence 9998621 1122223445554 999999999999999999999999999999865 1111 1222
Q ss_pred CCccccCCCCCCCCCCCCccchHHHHHHHHH--HHHhc-CCChhhhcc
Q 035779 597 WPEYYDGKTGRYVGKQARKYQTWSIAGYLVA--KMMVE-NPSNLLMIS 641 (659)
Q Consensus 597 ~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a--~~lL~-~P~~~~~~~ 641 (659)
..--.-|..++..|.+...+.|.|+|=++++ ..+|| ++....|+-
T Consensus 944 ~aaDi~~~D~~~~GrgGW~wYTgtaGw~y~a~ve~ILGIr~~~d~L~i 991 (1056)
T COG3459 944 SAADIYGKDAPRFGRGGWTWYTGTAGWYYRAIVEGILGIRKTGDALLI 991 (1056)
T ss_pred ehhhhhcccccccCCCCCceecCCcchhhHHhhhhheeeeecCCceEE
Confidence 1111113334556666678888888866644 67888 877666554
No 13
>PRK13271 treA trehalase; Provisional
Probab=99.79 E-value=2.2e-17 Score=186.33 Aligned_cols=342 Identities=14% Similarity=0.169 Sum_probs=229.2
Q ss_pred HHHHHHHHHHhhhccccCccceeeccCCCC--cccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhcccccc
Q 035779 193 MMEEALERLKKSYVYFKGKPVGTFAAMDPN--AEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKR 270 (659)
Q Consensus 193 ~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~--~~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ 270 (659)
-++.-|..|-|.+..- ..-+++--+.+. ..--.|..++.=|+...++|||.. |..++||+++.-|+.+
T Consensus 122 ~i~~lW~~L~R~~~~~--~~~~sli~lp~p~iVPGGRFrE~YYWDSY~i~~GLl~s--~~~~~a~~mi~Nf~~~------ 191 (569)
T PRK13271 122 HIDGLWPVLTRSTENT--EKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAES--GHWDKVADMVANFAHE------ 191 (569)
T ss_pred HHHHHHHHhcCcCCCC--CCCCceecCCCCeEecCCCcchhhhhHHHHHHHhhHhc--CCHHHHHHHHHHHHHH------
Confidence 3445577777755211 112333333322 122479999999999999999997 9999999999999986
Q ss_pred ccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHH
Q 035779 271 IDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLI 348 (659)
Q Consensus 271 ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~I 348 (659)
+ ...|.|||.=++- |.+| =.++.|...+..|++.||| ++++ .|.+++=+++-
T Consensus 192 i----~~yG~IPNg~R~Y-----------------Yl~R----SQPP~l~~Mv~~~~~~~~~-~~l~~~lp~l~kEy~~W 245 (569)
T PRK13271 192 I----DTWGHIPNGNRSY-----------------YLSR----SQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYW 245 (569)
T ss_pred H----HHhCcCcCCchhh-----------------cccC----CCChhHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHH
Confidence 3 2369999944321 1233 4567888999999999988 4555 24454444433
Q ss_pred HHh--------------ccCCCC--CcCC------c-------------c-------cc--------cCCCC---ccccc
Q 035779 349 LNL--------------CLSDGF--DTFP------T-------------L-------LC--------ADGCS---MIDRR 375 (659)
Q Consensus 349 l~~--------------~~~dGf--~~~p------~-------------L-------l~--------~Dg~~---~mD~~ 375 (659)
++- ...+|+ .-|. . + +. ..|.+ |+...
T Consensus 246 m~~~~~~~~~~~~~r~v~~~~~~~L~rY~~~~~~PRpEsy~eD~~~a~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~ 325 (569)
T PRK13271 246 MEGVENLQPGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNP 325 (569)
T ss_pred hCCCcccCccccccceEEeCCCCcccccccCCCCCCCCcHHHHHHHHhhCCcchHHHHHHHHHHHhhcCCcchhhhccCC
Confidence 321 011121 1110 0 0 00 01111 33111
Q ss_pred --C----CCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhh
Q 035779 376 --M----GIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHT 449 (659)
Q Consensus 376 --m----~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~ 449 (659)
+ -..=.||++|||+|++.+.++++++.+ |+.+.+++++++++++++.|++.||.+..
T Consensus 326 ~~l~~i~t~~IiPVDLNALLy~ae~~LA~la~~l-Gd~~~A~~y~~~A~~rr~AI~~~LWnee~---------------- 388 (569)
T PRK13271 326 QQLNTIRTTSIVPVDLNALMFKMEKILARASKAA-GDNAMANQYETLANARQKAIEKYLWNDKE---------------- 388 (569)
T ss_pred ccccccccccccCchHHHHHHHHHHHHHHHHHHh-CChhhHHHHHHHHHHHHHHHHHhcccCCC----------------
Confidence 0 001168999999999999999999998 56677888999999999999999996533
Q ss_pred hhcccccCCCCCCccccccccCCCceEEeee-cCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCc
Q 035779 450 AVNKFNVIPDSIPDWVFDFMPLRGGYLIGNV-SPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPL 528 (659)
Q Consensus 450 A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v-~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GL 528 (659)
||+++.. ..+.. ...+...+++.|++|+++++|+++|++.+. .+|++++|+
T Consensus 389 ------------------------G~f~DYDl~~~~~-r~~~saa~f~PLwag~a~~~qA~~Vv~~l~---~~Ll~pgGL 440 (569)
T PRK13271 389 ------------------------GWYADYDLKSHKV-RNQLTAAALFPLYVNAAAKDRANKVAAATK---THLLQPGGL 440 (569)
T ss_pred ------------------------CEEEEEECCCCCE-eechhHHHHHhhhcCCCCHHHHHHHHHHHH---HhcCCCCCc
Confidence 3333322 11111 123567888999999999999999999985 478899999
Q ss_pred ccccCCCCCCCceEeecCCCCCCCcccccCCc-chhhHHHHHHHHHHcCChHHHHHHHHHHHHHh-----cCCCCCcccc
Q 035779 529 KISYPALDGHEWRIVTGYDPKNTRWSYHNGGS-WPVLLWLLTAASIKTGRPQIAKRAIELAEQRL-----SKDGWPEYYD 602 (659)
Q Consensus 529 r~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgV-WP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l-----~~~~~pE~fD 602 (659)
.+..| . +..|+.|.+ ||-++|+++.|+.++|..+.|+++.....+.. ..+.+.|.||
T Consensus 441 pTt~~--~---------------SgqQWD~PngWaPlq~iiieGL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd 503 (569)
T PRK13271 441 NTTSV--K---------------SGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDVTWRFLTNVQHTYDREKKLVEKYD 503 (569)
T ss_pred cCCCC--C---------------CCCCCcCcccCHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcccCceEEeeC
Confidence 88776 1 235789988 99999999999999999998888776553332 4566899999
Q ss_pred CC-CCCCCCCC---CCccchHHHHHHHHHHHHhc
Q 035779 603 GK-TGRYVGKQ---ARKYQTWSIAGYLVAKMMVE 632 (659)
Q Consensus 603 G~-~g~p~G~~---ac~~QAWSaA~~L~a~~lL~ 632 (659)
.. +|.+.|.+ ...-+.||.|.+|-+....+
T Consensus 504 ~~~~G~~gGGGeY~~q~GFGWTNgV~L~lL~~~~ 537 (569)
T PRK13271 504 VSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLIC 537 (569)
T ss_pred CCCCCCCCCCCCCCCCCCcCcHHHHHHHHHHhcC
Confidence 73 55544322 33578899999886655544
No 14
>PLN02567 alpha,alpha-trehalase
Probab=99.73 E-value=7.5e-16 Score=174.24 Aligned_cols=363 Identities=13% Similarity=0.108 Sum_probs=232.7
Q ss_pred HHHHHHHHHhhhccc--cCccceeeccCCCC--cccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccc
Q 035779 194 MEEALERLKKSYVYF--KGKPVGTFAAMDPN--AEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEK 269 (659)
Q Consensus 194 ~~~a~~~l~~s~v~~--~~~~~Gt~Aa~d~~--~~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~ 269 (659)
+..-|..|-|.+..- +...-+++-.+.+. ..--.|..+|.=|+...++|||.. |..+.||+++..|+.+|-
T Consensus 112 i~~lW~~L~R~~~~~v~~~~~~~sli~lp~p~iVPGgRFrE~yyWDSy~i~~GLl~s--~~~~~A~~mi~Nf~~~i~--- 186 (554)
T PLN02567 112 VHSLWKNLARKVSDSVEERPDRHTLLPLPNPVVVPGSRFREVYYWDSYWVIRGLLAS--KMYETAKGVVENLLYLVD--- 186 (554)
T ss_pred HHHHHHHhccccCcccccCCCcCCcccCCCCeEccCCCcCccchHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHH---
Confidence 344577776655110 01112333333322 122479999999999999999997 999999999999999854
Q ss_pred cccccccCCCccCCcceecccccccccccccCCCCCCC-CCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHH
Q 035779 270 RIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAI-GRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMK 346 (659)
Q Consensus 270 ~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~ai-G~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~ 346 (659)
..|.|||.-++ || | .=.+|.+..++..|++.|+|.+|++ .|.+.+=.+
T Consensus 187 -------~~GfIPNg~R~------------------Yyl~----RSQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~ 237 (554)
T PLN02567 187 -------TYGFVPNGARA------------------YYTN----RSQPPLLSAMVLAVYAATKDVELVRRALPALLKEHA 237 (554)
T ss_pred -------HcCcCCCCCcc------------------cccC----CCCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 37999984421 22 3 3577899999999999999999998 366666666
Q ss_pred HHHHhc------cCCC----CCcCCc-------------------------------ccc----cCCCC---cccc----
Q 035779 347 LILNLC------LSDG----FDTFPT-------------------------------LLC----ADGCS---MIDR---- 374 (659)
Q Consensus 347 ~Il~~~------~~dG----f~~~p~-------------------------------Ll~----~Dg~~---~mD~---- 374 (659)
|-++.. ...| +..|.. .+. ..|.+ |+..
T Consensus 238 ~W~~~~~~v~i~~~~g~~~~L~rY~~~~~~PrpEsyreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l 317 (554)
T PLN02567 238 FWTSGRHTVTIRDANGVVHVLSRYYAMWDKPRPESSRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMRDGSNL 317 (554)
T ss_pred HHhcCCcceeeecCCCCcCCCcccccCCCCCCCccccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhccccccc
Confidence 555410 1011 111100 000 00110 1110
Q ss_pred ----cCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhh
Q 035779 375 ----RMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTA 450 (659)
Q Consensus 375 ----~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A 450 (659)
...+ .||..|++.|.+.+.+++|++.+ |+.+.++++.++++.+++.|++.+|.+..+.- |+|.
T Consensus 318 ~ti~t~~i--~pVDLNa~L~~~e~~LA~la~~l-G~~~~a~~~~~~A~~~~~aI~~~lWdee~G~y--~Dyd-------- 384 (554)
T PLN02567 318 TTLRTTSI--LPVDLNAFLLKMELDIAFFAKLL-GDKATAERFLKAAKARKRAINAVLWNEEMGQW--LDYW-------- 384 (554)
T ss_pred cccccccc--cCccHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHhcCcccCeE--Eeec--------
Confidence 0011 57999999999999999999998 56677889999999999999999998766521 1111
Q ss_pred hcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHH--HHHHHHHHHHHHHHhhhcCCCc
Q 035779 451 VNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPA--QATAIMDLIEERWEDLIGEMPL 528 (659)
Q Consensus 451 ~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~e--qa~~Vl~~V~~~~~~Lltp~GL 528 (659)
+...... + +.-| . +.+... .+.+..+|++.|++|+++++ +++++++.+++ ..+..|.|+
T Consensus 385 -----l~~~~~~-------~-~~~~--~-~~~~~~-~~~~~~s~f~PLw~g~~~~~~~~a~~v~~~l~~--~~l~~pgGi 445 (554)
T PLN02567 385 -----LPPNGAT-------C-QESY--T-WDAENQ-NTNVYASNFVPLWCGVVPPGDAKVEKVVESLKS--SGLVLPAGI 445 (554)
T ss_pred -----ccccccc-------c-cccc--c-cccccc-ccCccHHHHHHHHcCCCChhhHHHHHHHHHHHh--ccCccCCcc
Confidence 0000000 0 0000 0 011111 12456788999999999986 57788888753 356666666
Q ss_pred ccccCCCCCCCceEeecCCCCCCCcccccCC-cchhhHHHHHHHHHHcCChH---HHHHHHHHH-----HHHhcCCCCCc
Q 035779 529 KISYPALDGHEWRIVTGYDPKNTRWSYHNGG-SWPVLLWLLTAASIKTGRPQ---IAKRAIELA-----EQRLSKDGWPE 599 (659)
Q Consensus 529 r~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGg-VWP~llg~~~~Al~k~G~~~---~A~~ll~~~-----~~~l~~~~~pE 599 (659)
.+. -.++..|+.|. +||-++++++.|+.++|..+ .|.++.... ......+.+-|
T Consensus 446 pts-----------------l~~sg~qWdgPn~W~pl~~l~i~GL~~yG~~ea~~lA~~la~rwl~~~~~~~~~tg~m~E 508 (554)
T PLN02567 446 ATS-----------------LRNTGQQWDFPNAWAPLQHMIVEGLAASGSKEGKALAEDIARRWLRSNYVAYKKTGAMHE 508 (554)
T ss_pred cCC-----------------CCCccccCCCCCcCHhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHhcCceEE
Confidence 431 12345689999 99999999999999999865 666654322 23334667899
Q ss_pred cccCCCCCCCCC-CCCcc---chHHHHHHHHHHHHhcCCChhhh
Q 035779 600 YYDGKTGRYVGK-QARKY---QTWSIAGYLVAKMMVENPSNLLM 639 (659)
Q Consensus 600 ~fDG~~g~p~G~-~ac~~---QAWSaA~~L~a~~lL~~P~~~~~ 639 (659)
+||..++...|. +.... +.||.|.+|.+....+.|.+..+
T Consensus 509 kYd~~~~~~~GgGGey~~q~GFGWTngV~L~ll~~yg~~~~~~~ 552 (554)
T PLN02567 509 KYDARYCGEVGGGGEYIPQTGFGWSNGVVLSLLEEFGWPEDKKL 552 (554)
T ss_pred eECCCCccccCCCCCCCCCCCcChHHHHHHHHHHHhCCcccCCC
Confidence 999876443332 22334 45999998877777777765443
No 15
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=99.70 E-value=2.6e-17 Score=177.92 Aligned_cols=316 Identities=18% Similarity=0.187 Sum_probs=94.0
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHhhccccccc---------cccccCCCccCCcceec-ccccccccccccCCCCCCCC
Q 035779 239 TALACLMIEPAEPEIVKNFLLKTLHLQGWEKRI---------DNFTLGEGVMPASFKVL-FNSHQQKETLVADFGGSAIG 308 (659)
Q Consensus 239 S~lglLl~~~g~peiar~~L~~~a~lQ~~~~~l---------d~~~~~~GliP~~fki~-h~p~~~~e~~~~dfG~~aiG 308 (659)
+++.++. .=|++.+.+++.++..+..+..- -.-+...|.||+.+... .+|... ...|.-+ .
T Consensus 23 ~s~al~~---lfP~Le~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~G~vphdlg~p~~~P~~~----~n~y~~~--~ 93 (365)
T PF04685_consen 23 ASFALLK---LFPELERSMQRDFADAILSEDNTERKILYDGKIAPRKVRGAVPHDLGSPFDDPWDR----TNAYNYH--D 93 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccc--c
Confidence 4555555 68999999999888876553100 00011348889876321 011000 0001100 1
Q ss_pred CcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHHhc-cCCCCCcCCcccccCCCCcccccCCCCCCchhh
Q 035779 309 RVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLC-LSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEI 385 (659)
Q Consensus 309 ~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~~~-~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEI 385 (659)
...-+|..++||+.+++|+++|||.+|++ +|.|+++|+|++... +.||+.+.++ .+| .++|.+ .+.|...++
T Consensus 94 ~~~~~D~~~~fVL~vyr~~~~TGD~~fL~~~wp~v~~a~~~~~~~D~d~dGl~e~~g--~~D--~TyD~~-~~~G~say~ 168 (365)
T PF04685_consen 94 VYAWKDLNPKFVLQVYRDYKWTGDRDFLKEMWPAVKKAMDYLLSWDRDGDGLPENPG--HPD--QTYDDW-SMYGPSAYC 168 (365)
T ss_dssp -----------------------------EHHHHHHHHHHHHHHSB--TTS-BEEET-------SSSTT--EEEEEEHHH
T ss_pred ccccccccccccccccccccccccchhhhhHHHHHHHHHHHHHhhCCCCCCCCCCCC--CCc--cccccC-CeeCCCHHH
Confidence 12358999999999999999999999999 799999999999854 3457765443 223 445644 257888999
Q ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccc
Q 035779 386 QSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWV 465 (659)
Q Consensus 386 QALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl 465 (659)
++||+.||+++++||+.+ ++.+.++++++.+++.++.|++.+|+.. .+++.|+.+ ..
T Consensus 169 ~~L~laAL~A~~emA~~l-gd~~~a~~y~~~~~~~~~~~~~~LWnGe-yy~~~~d~~-~~-------------------- 225 (365)
T PF04685_consen 169 GGLWLAALRAAAEMAKIL-GDPELAAKYRELAEKAKKAFNKKLWNGE-YYRQWYDSK-YQ-------------------- 225 (365)
T ss_dssp HHHHHHHHHHHHHHHHHH-T-HHHHHHHHHHHHHHHHHHHHHSEETT-EE--EE----TT--------------------
T ss_pred HHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHhhCHh-heeeeeccC-CC--------------------
Confidence 999999999999999999 6788899999999999999999999532 322111100 00
Q ss_pred cccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhh-----cCCCccccc-CCCCCCC
Q 035779 466 FDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLI-----GEMPLKISY-PALDGHE 539 (659)
Q Consensus 466 ~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Ll-----tp~GLr~l~-Pa~~d~~ 539 (659)
.. +.+--.++-.++++. ++-+..++++++.++.|+.|.+ .-+ +++|+..+. | .
T Consensus 226 -----~~-----~~~~aDQl~Gqw~a~---~~gl~~v~~~e~v~sAL~sI~~---~N~~~~~~~~~G~~n~~~p--~--- 284 (365)
T PF04685_consen 226 -----NG-----DGCMADQLCGQWWAR---LLGLGDVLDEEKVKSALRSIYE---YNVKYFLGGEMGAVNGVWP--D--- 284 (365)
T ss_dssp -----S------EES-TT-SS--EEHH---HHHHTT-S-HHHHHHHHHHHHH---HHEE-S-BTTTBGGGGS-T------
T ss_pred -----CC-----CeEEeChhhHHHHHH---HcCCcCCCCHHHHHHHHHHHHH---hcCeEccCCCCcEEEeeec--c---
Confidence 00 001011111122221 1224778999999999999975 333 466766543 3 1
Q ss_pred ceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhc-----CCCCCccccCCCCCCCCCC-C
Q 035779 540 WRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLS-----KDGWPEYYDGKTGRYVGKQ-A 613 (659)
Q Consensus 540 wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~-----~~~~pE~fDG~~g~p~G~~-a 613 (659)
+. ...-+.|...|||-+...+++.++..|..++|.++++.+.++.. ...-||.+++.. .+.+.. .
T Consensus 285 ------g~--~~~~~~q~~evW~G~~y~~Aa~mi~~G~~~e~~~~~~~~~~~~~~~~g~~f~~pE~~~~~~-~~r~~~Y~ 355 (365)
T PF04685_consen 285 ------GK--PDTSSPQSNEVWTGVEYAVAAHMIQEGMVEEGLEIAKGIYDRYYGRKGNPFNTPEAINADG-NYRGSHYM 355 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------cc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 11 23346678889999999999999999999999999987754443 223489988755 333321 2
Q ss_pred CccchHHH
Q 035779 614 RKYQTWSI 621 (659)
Q Consensus 614 c~~QAWSa 621 (659)
+..-.|++
T Consensus 356 R~ls~W~~ 363 (365)
T PF04685_consen 356 RPLSIWSM 363 (365)
T ss_dssp --------
T ss_pred cccccccc
Confidence 34445653
No 16
>PRK13272 treA trehalase; Provisional
Probab=99.69 E-value=7.8e-15 Score=164.81 Aligned_cols=344 Identities=14% Similarity=0.141 Sum_probs=228.2
Q ss_pred HHHHHHHHHHhhhccccCcc-ceeeccCCCC--cccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccc
Q 035779 193 MMEEALERLKKSYVYFKGKP-VGTFAAMDPN--AEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEK 269 (659)
Q Consensus 193 ~~~~a~~~l~~s~v~~~~~~-~Gt~Aa~d~~--~~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~ 269 (659)
-++.-|..|-|... ..| -+++--+.+. ..--.|..++.=|+...++|||.. |..++||+++..|+.+
T Consensus 123 ~i~~lW~~L~R~~~---~~~~~~Sli~lp~p~iVPGGRFrE~YYWDSY~i~~GLl~s--~~~~~a~~mi~Nf~~~----- 192 (542)
T PRK13272 123 HIDALWPKLVRSQE---QVPAHSSLLALPHPYVVPGGRFREVYYWDSYFTMLGLVKS--GQTTLSRQMLDNFAYL----- 192 (542)
T ss_pred HHHHHHHHhccccC---CCCCcCccccCCCCeeecCCCccchhhhHHHHHHHhhhhc--CcHHHHHHHHHHHHHH-----
Confidence 35666887777662 222 2333333322 122479999999999999999997 9999999999999986
Q ss_pred cccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc-cHHHHHHHHHH
Q 035779 270 RIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE-LPEVQRGMKLI 348 (659)
Q Consensus 270 ~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~-~p~vq~aL~~I 348 (659)
+ ..-|.|||.=++- |.+| =.++.|...+..|++.|||..+.+ .|.+++=+++-
T Consensus 193 -i----~~yGfIPNG~R~Y-----------------Yl~R----SQPP~l~~Mv~~~~~~t~d~~~~~~lp~l~kEy~~W 246 (542)
T PRK13272 193 -I----DTYGHIPNGNRTY-----------------YLSR----SQPPFFSYMVELQAGVEGDAAYQRYLPQLQKEYAYW 246 (542)
T ss_pred -H----HHcCcCcCCchhc-----------------cccC----CCchhHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 3 2369999944320 1233 456789999999999999988643 24444444433
Q ss_pred HHhc--------------cCCCCC--cC------Cc-------cc---------------------ccCCCC---ccccc
Q 035779 349 LNLC--------------LSDGFD--TF------PT-------LL---------------------CADGCS---MIDRR 375 (659)
Q Consensus 349 l~~~--------------~~dGf~--~~------p~-------Ll---------------------~~Dg~~---~mD~~ 375 (659)
++-. ..+|+. .| |. +. -..|.+ |+...
T Consensus 247 m~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsy~eD~~~a~~~~~~~~~~~Y~~l~a~aESGWDfSsRw~~~~ 326 (542)
T PRK13272 247 MQGSDDLQPGQAARHVVRLADGSLLNRYWDERDTPRPEAWLHDTRTAAEAKDRPAAEVYRDLRAGAESGWDYSSRWLADG 326 (542)
T ss_pred cCCCCCCCCccccceeEecCCCcchhhhcCCCCCCCChHHHHHHHHhcCcccCcHHHHHHHHHHHHhcCCCchhhhcccc
Confidence 2210 012210 00 00 00 001111 22100
Q ss_pred --C----CCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhh
Q 035779 376 --M----GIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHT 449 (659)
Q Consensus 376 --m----~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~ 449 (659)
+ ...=.||..|++.|.+-+.++++++.+ |+.+.+++++++++.+++.|++.+|.+ .++
T Consensus 327 ~~L~~i~t~~IvpVDLNalL~~~e~~LA~~~~~l-G~~~~a~~~~~~A~~r~~aI~~~lWde-~G~-------------- 390 (542)
T PRK13272 327 KTLASIRTTAIVPVDLNSLLYHLERTLAQACASS-GLAACSQDYAALAQQRKQAIDAHLWNP-AGY-------------- 390 (542)
T ss_pred ccccccCcccccCccHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHhccCc-Cce--------------
Confidence 0 001148999999999999999999988 566778889999999999999999964 331
Q ss_pred hhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcc
Q 035779 450 AVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLK 529 (659)
Q Consensus 450 A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr 529 (659)
|+.=++..+.. ...+..++++.|++|+++++|++++++.++. .++.+.|+.
T Consensus 391 -------------------------~~DYD~~~~~~-~~~~s~a~f~PLwag~a~~~~a~~l~~~l~~---~~l~~gGlp 441 (542)
T PRK13272 391 -------------------------YADYDWQTRTL-SEQVTAAALYPLFAGLASDDRAKRTADSVRA---QLLRPGGLA 441 (542)
T ss_pred -------------------------EEeeccCCCCc-cccccHHHHHHHHcCCCCHHHHHHHHHHHHH---hccCCCCcC
Confidence 11111221211 1246788999999999999999999998864 566777776
Q ss_pred cccCCCCCCCceEeecCCCCCCCcccccCC-cchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhc-----CCCCCccccC
Q 035779 530 ISYPALDGHEWRIVTGYDPKNTRWSYHNGG-SWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLS-----KDGWPEYYDG 603 (659)
Q Consensus 530 ~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGg-VWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~-----~~~~pE~fDG 603 (659)
+..| ++..|+.|. +||-++|+++.|+.++|..+.|+++.....+... .+.+.|+||-
T Consensus 442 Tt~~-----------------~sgqQWD~PN~WaPlq~i~i~GL~~yG~~~lA~~La~rwl~~~~~~~~~~g~m~EKYdv 504 (542)
T PRK13272 442 TTAL-----------------KTGQQWDEPNGWAPLQWVAVDGLRRYGEDALARTIGERFLAQVQALFAREHKLVEKYGL 504 (542)
T ss_pred CCCC-----------------CccccCCCCCccHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcCceeEEeec
Confidence 6554 234589999 9999999999999999999999888776544433 5679999984
Q ss_pred CC-CCCCC---CCCCccchHHHHHHHHHHHHhcCC
Q 035779 604 KT-GRYVG---KQARKYQTWSIAGYLVAKMMVENP 634 (659)
Q Consensus 604 ~~-g~p~G---~~ac~~QAWSaA~~L~a~~lL~~P 634 (659)
.. +...| +....-++||.|.+|.+....+.+
T Consensus 505 ~~~g~~GgGGEY~~Q~GFGWTNgV~L~lL~~yg~~ 539 (542)
T PRK13272 505 DGNAAGGGGGEYALQDGFGWTNGVTLMLLNLYPPG 539 (542)
T ss_pred CCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHhccc
Confidence 22 11111 112357889999988666555543
No 17
>PRK13270 treF trehalase; Provisional
Probab=99.65 E-value=5.3e-14 Score=158.52 Aligned_cols=341 Identities=12% Similarity=0.155 Sum_probs=219.5
Q ss_pred HHHHHHHHHhhhccccCcc-ceeeccCCCC--cccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhcccccc
Q 035779 194 MEEALERLKKSYVYFKGKP-VGTFAAMDPN--AEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKR 270 (659)
Q Consensus 194 ~~~a~~~l~~s~v~~~~~~-~Gt~Aa~d~~--~~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ 270 (659)
++.-|..|-|... .+| -+++--+.+. ..--.|..++.=|+...++|||.. |..++||+++.-|+.+
T Consensus 135 i~~lW~~L~R~~~---~~~~~~Sli~lp~p~iVPGGRFrE~YYWDSYwi~~GLl~s--g~~~~a~~mi~Nf~~l------ 203 (549)
T PRK13270 135 IDQLWPVLTREPQ---DHIPWSSLLALPQSYIVPGGRFSETYYWDSYFTMLGLAES--GREDLLKCMADNFAWM------ 203 (549)
T ss_pred HHHHhHHhccccc---CCCCcCccccCCCCeEecCCCcccchhhhHHHHHHHhhhc--CcHHHHHHHHHHHHHH------
Confidence 3444766666542 111 2333333322 122479999999999999999997 9999999999999986
Q ss_pred ccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHH
Q 035779 271 IDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLI 348 (659)
Q Consensus 271 ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~I 348 (659)
+ ..-|.|||.=++- |.+| =.++.|...+..|++ .|.++++ .|.+++=+++-
T Consensus 204 i----~~yGfIPNG~R~Y-----------------Yl~R----SQPP~l~~Mv~~y~~--~~~~~~~~~lp~l~~E~~fW 256 (549)
T PRK13270 204 I----ENYGHIPNGNRTY-----------------YLSR----SQPPVFALMVELFEE--DGVRGARRYLDHLKMEYAFW 256 (549)
T ss_pred H----HHcCcCcCCchhc-----------------cccC----CCCHhHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHH
Confidence 3 2369999944321 1233 456677888888876 4556655 23333333322
Q ss_pred HHhc--------------cCCC--CCcC------Cc-------ccc--------------------cCCCC---cccccC
Q 035779 349 LNLC--------------LSDG--FDTF------PT-------LLC--------------------ADGCS---MIDRRM 376 (659)
Q Consensus 349 l~~~--------------~~dG--f~~~------p~-------Ll~--------------------~Dg~~---~mD~~m 376 (659)
++-. ..+| +.-| |. +.. ..|.+ |+....
T Consensus 257 m~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsyreD~~~a~~~~rp~~~~Y~~lra~aESGWDfSsRW~~~~~ 336 (549)
T PRK13270 257 MDGAESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTG 336 (549)
T ss_pred cCCCCccCcccccceeEecCCCCccccccCCCCCCCCchhHHHHHhhcccCCchHHHHHHHHHHHHcCCCchhhcccCCc
Confidence 2100 0111 1111 00 000 01111 211000
Q ss_pred CCC------CCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhh
Q 035779 377 GIY------GYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTA 450 (659)
Q Consensus 377 ~r~------G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A 450 (659)
... =.||..||+.|.+.+.++++++.+ |+.+.+++++++++.+++.|++.+|.+..++
T Consensus 337 ~L~~i~T~~iipVDLNaiL~~~e~~LA~~a~~l-G~~~~a~~~~~~A~~r~~AI~~~LWnee~G~--------------- 400 (549)
T PRK13270 337 RLASIRTTQFIPIDLNAFLYKLESAIANISALK-GEKETEALFRQKASARRDAVNRYLWDDENGI--------------- 400 (549)
T ss_pred ccccccccCcchhhHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHhccCcccCe---------------
Confidence 000 158899999999999999999998 5667888999999999999999999655441
Q ss_pred hcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCccc
Q 035779 451 VNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKI 530 (659)
Q Consensus 451 ~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~ 530 (659)
|+.=++..+.. +.+..++++.|++|+++++|++++++.++. .++.+.|+.+
T Consensus 401 ------------------------~~DYD~~~~~~--~~~s~a~f~PLwaG~a~~~qa~~l~~~l~~---~ll~pGGl~t 451 (549)
T PRK13270 401 ------------------------YRDYDWRREQL--ALFSAAAIVPLYVGMANHEQADRLANAVRS---RLLTPGGILA 451 (549)
T ss_pred ------------------------EEecccccCcc--ccccHHHHHHHHhCCCCHHHHHHHHHHHHH---hcccCCCcCC
Confidence 11112222222 356889999999999999999999998853 4555555432
Q ss_pred ccCCCCCCCceEeecCCCCCCCcccccCC-cchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhc-----CCCCCccccCC
Q 035779 531 SYPALDGHEWRIVTGYDPKNTRWSYHNGG-SWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLS-----KDGWPEYYDGK 604 (659)
Q Consensus 531 l~Pa~~d~~wr~~t~gdp~~rP~SYHNGg-VWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~-----~~~~pE~fDG~ 604 (659)
. .+++..|+.|. +||-++|+++.|+.++|..+.|.++.....+... .+.+.|.||..
T Consensus 452 S-----------------~~~sgqQWD~PN~WaPlqwmiieGL~ryG~~~lA~~LA~rwl~~~~~~~~~~g~m~EKYdv~ 514 (549)
T PRK13270 452 S-----------------EYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYQEHHKLIEKYHIA 514 (549)
T ss_pred C-----------------CCCCcccCCCCCCCccHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcCeeEEEecCC
Confidence 1 13455689999 8999999999999999999888888776543333 56789999875
Q ss_pred CCC--CCC---CCCCccchHHHHHHHHHHHHhcCC
Q 035779 605 TGR--YVG---KQARKYQTWSIAGYLVAKMMVENP 634 (659)
Q Consensus 605 ~g~--p~G---~~ac~~QAWSaA~~L~a~~lL~~P 634 (659)
++. ..| +....-+.||.|.+|.+....++|
T Consensus 515 ~~~g~~GgGGEY~~q~GFGWTNGV~l~~l~~yg~~ 549 (549)
T PRK13270 515 GGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549 (549)
T ss_pred CCCCCCCCCCCcCCCCCcCcHHHHHHHHHHHhCCC
Confidence 432 211 112356789999988766655543
No 18
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=99.63 E-value=3.6e-14 Score=159.60 Aligned_cols=317 Identities=18% Similarity=0.250 Sum_probs=198.3
Q ss_pred CCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCC
Q 035779 226 LNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGS 305 (659)
Q Consensus 226 ~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~ 305 (659)
-.|..++.=|+...+.|||.. |..+.||+++..|+.+ ++ .-|.|||.=++-
T Consensus 124 GRF~E~YyWDSYfi~~GLl~s--~~~~~a~~mi~Nf~~~------i~----~yGfipNg~R~Y----------------- 174 (512)
T PF01204_consen 124 GRFREMYYWDSYFIILGLLAS--GMYETAKGMIENFLYL------ID----RYGFIPNGNRTY----------------- 174 (512)
T ss_dssp TTB-S-BHHHHHHHHHHHHHT--T-HHHHHHHHHHHHHH------HH----HHSS--SBSBGG-----------------
T ss_pred CCcccchhHhHHHHHHHHHHc--CCHHHHHHHHHHHHHH------HH----HhCcCCCCccHH-----------------
Confidence 478899999999999999998 9999999999999986 32 359999944321
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHcCChhhhcc--HHHHHHHHHHHH-h------ccCCCCC--cC------Cc------
Q 035779 306 AIGRVAPVDSGFWWIILLRSYTKCTRDYALAEL--PEVQRGMKLILN-L------CLSDGFD--TF------PT------ 362 (659)
Q Consensus 306 aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~--p~vq~aL~~Il~-~------~~~dGf~--~~------p~------ 362 (659)
|.+| =.+|.|...+.+|++.|+|.++++. |.+.+=+.|=+. . .+..++. .| |.
T Consensus 175 yl~R----SQPPlla~mV~~~y~~t~d~~~l~~~lp~L~ke~~fW~~~~r~~~~~~~~~~~~l~ry~~~~~~prpEsy~e 250 (512)
T PF01204_consen 175 YLNR----SQPPLLAQMVREYYEATKDKAFLREALPALEKEYEFWMDNNRDVRVTGLGKGYGLNRYGDPWNSPRPESYRE 250 (512)
T ss_dssp GTT-------S--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCCCEEETTEEEECTSEECCHHHHCHHCT-CCCCCH
T ss_pred hccC----CCCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHCCCCcceeecCCCccCCcccccCCCCCCcchHHHh
Confidence 1122 4567899999999999999999983 555544444441 0 0111111 00 00
Q ss_pred ---------------ccc-------cCCCCcccccCCC--------------CCCchhhHHHHHHHHHHHHHhcccCCCC
Q 035779 363 ---------------LLC-------ADGCSMIDRRMGI--------------YGYPIEIQSLFYFALRCARQMLKPERDG 406 (659)
Q Consensus 363 ---------------Ll~-------~Dg~~~mD~~m~r--------------~G~PVEIQALwY~ALr~aaeLa~~~~~~ 406 (659)
.+. -+|-+.-+|++.. .-.||..||+.|.+.+.+++|++.+ |+
T Consensus 251 D~~~a~~~~~~~~~~~~y~~i~saaESGwDfssRw~~~sg~d~~~l~~~~t~~iipVDLNa~L~~~e~~LA~~a~~l-G~ 329 (512)
T PF01204_consen 251 DVETAENFPSERDKEELYRDIASAAESGWDFSSRWFRDSGFDNSNLFTIRTTDIIPVDLNAILYRNEKDLAEFAELL-GD 329 (512)
T ss_dssp HHHHHHCHCHTSTCHHHHCHHHHHHHCCHHCTGGGBSSECCEE-TCHHCECCCEE-HHHHHHHHHHHHHHHHHHHHT-T-
T ss_pred hHHHHHhhcccchHHHHhhcccchhhhhhhccceeeecCCCchhhhhccceeeecCchHHHHHHHHHHHHHHHHHHc-Cc
Confidence 000 0111112333321 1147899999999999999999999 67
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCccc
Q 035779 407 KELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMD 486 (659)
Q Consensus 407 ~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d 486 (659)
.+.++.++++++.+++.|+++||.+..++ |+.-++..+. .
T Consensus 330 ~~~a~~~~~~A~~~~~aI~~~lWdee~g~---------------------------------------~~Dyd~~~~~-~ 369 (512)
T PF01204_consen 330 QEKAEEYRQRAEERKEAINQYLWDEEDGF---------------------------------------YYDYDLRTGK-R 369 (512)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTEETTTTE---------------------------------------E--EETTTTE-E
T ss_pred hhHHHHHHHHHHHHHHHHHHhCccCCCCe---------------------------------------EEeeeCCCCC-C
Confidence 88899999999999999999999765441 2211222221 1
Q ss_pred ccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCC-cchhhH
Q 035779 487 FRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGG-SWPVLL 565 (659)
Q Consensus 487 ~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGg-VWP~ll 565 (659)
.+.+...+++.|++|+++++|++++++.+.. .+....++.. |. ++ -...+.+..|+.|. +||-++
T Consensus 370 ~~~~~~a~f~PL~ag~a~~~qa~~~~~~~l~---~~~~~~~l~~--~~-------g~--~ts~~~~~~qWD~Pn~WaPlq 435 (512)
T PF01204_consen 370 SPVFSPANFLPLWAGIASPEQAERLVARALD---YLERSGLLTF--PG-------GI--PTSLYDTGQQWDGPNVWAPLQ 435 (512)
T ss_dssp GG--BGGGGHHHHTT-S-HHHHHHHHHHHHH---HCTTCCSSC---CS-------EC--TTCTTTTTSTTSTTEEEHHHH
T ss_pred cccccHHHHHHHHHhhcCHhhhhhHHHHHHH---HHHhcCCccc--CC-------CC--CCccccccccCCCCCccHhHH
Confidence 2356788999999999999998888877653 3332222221 20 00 12334477889998 799999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHH----hc-CCCCCccccCCCC-CCC-C---CCCCccchHHHHHHHHHHHH
Q 035779 566 WLLTAASIKTGRPQIAKRAIELAEQR----LS-KDGWPEYYDGKTG-RYV-G---KQARKYQTWSIAGYLVAKMM 630 (659)
Q Consensus 566 g~~~~Al~k~G~~~~A~~ll~~~~~~----l~-~~~~pE~fDG~~g-~p~-G---~~ac~~QAWSaA~~L~a~~l 630 (659)
++++.||.++|..+.|.++.....+. +. .+.+-|.||...+ .+. | +....-..||.|.+|.+...
T Consensus 436 ~~~i~GL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~~~~gg~gGeY~~q~GFGWTNgv~l~~l~~ 510 (512)
T PF01204_consen 436 WMAIEGLRRYGYRELARRLAQRWLRLNYKVFKRTGKMFEKYDVEDGGEPGGGGGEYPVQDGFGWTNGVYLDLLDK 510 (512)
T ss_dssp HHHHHHHHHTT-HHHHHHHHHHHHHHHHHCCCCCSSEBSEEETTTTSCEC-S-SSS---BS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhcCchhccccceeccccCCCCCcccCCCCCccHHHHHHHHHHh
Confidence 99999999999999988888765332 22 3457899997642 222 1 12234567999998865443
No 19
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=99.62 E-value=1.1e-14 Score=162.32 Aligned_cols=337 Identities=18% Similarity=0.217 Sum_probs=205.2
Q ss_pred CcchHHHHHHHHHHhhhccccCccceeeccCCCCcccCCC--CCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhcc
Q 035779 189 TGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNY--NQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQG 266 (659)
Q Consensus 189 ~~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~~~~nY--~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~ 266 (659)
..++++++-|+.-++++.. |- - |--.+-+.+ ...|+-|+.++++..+.. .++.+.+|+.|..++..|.
T Consensus 114 ~sd~~ln~i~~~~~~T~~~-n~--~------~~~~Dcp~RdER~~w~GD~~~~~~~~~~~-~~~~~l~~~~l~~~~~~q~ 183 (509)
T PF05592_consen 114 CSDPLLNRIWEMSRRTLRS-NM--Q------DVFTDCPKRDERLGWTGDARVSALTAYYS-FGDAALYRKWLRDFADSQR 183 (509)
T ss_dssp ES-HHHHHHHHHHHHHHHH-TB--S------SSB-SBTTT-T---BHHHHHHHHHHHHCC-T--HHHHHHHHHHHHGGTT
T ss_pred cCcHHHHHHHHHHHHHHHh-hC--C------CCceECcchhhhcCCcchHHHHHHHHHHh-CCcHHHHHHHHHHHHHhhc
Confidence 3467888888877777621 11 1 111122555 367999999999987764 6899999999999888664
Q ss_pred ccccccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHH
Q 035779 267 WEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRG 344 (659)
Q Consensus 267 ~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~a 344 (659)
++|.+|... |... . +.....|=+++||+.+++|++.|||.++++ +|.+++.
T Consensus 184 ----------~~G~~p~~~-----P~~~-------~-----~~~~~~~w~l~~i~~~~~~y~~tGD~~~l~~~~~~~~~~ 236 (509)
T PF05592_consen 184 ----------PDGLLPSVA-----PSYG-------G-----GGFGIPDWSLAWIIIPWDYYLYTGDREFLEEYYPAMKRY 236 (509)
T ss_dssp ----------TSTT-SSBS-----S----------S-----SGGGBHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHH
T ss_pred ----------ccCCceEEe-----cccC-------C-----CCCCCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 478888743 2100 0 111235778899999999999999999999 6999999
Q ss_pred HHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHH
Q 035779 345 MKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHI 424 (659)
Q Consensus 345 L~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~ 424 (659)
|+++....+. +....+.-...||...........+..+-.|+++|.||+.+++|++.+ |+.+.+++++++++.||+.|
T Consensus 237 l~~~~~~~~~-~~~~~~~~~~~DW~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~lA~~l-g~~~~a~~y~~~a~~lk~a~ 314 (509)
T PF05592_consen 237 LDYLERRVDD-GLDGLPGWGFGDWLAPGNDGDGPTPGATITNALYYYALRAAAELAEAL-GKDEDAAEYRARAERLKAAI 314 (509)
T ss_dssp HHHHHTTB-T-SSB-CCSB--S-SS----TT---SCCEEHHHHHHHHHHHHHHHHHHHC-T-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCc-cccCCCCCceeecCCccCcccccchHHHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHH
Confidence 9999887654 322222211345441111111222334458999999999999999999 66777999999999999999
Q ss_pred HHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCC
Q 035779 425 QKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLAT 504 (659)
Q Consensus 425 ~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~ 504 (659)
+++||.+.+. +|- . ..-.+|.+||.+|+++
T Consensus 315 ~~~~~d~~~g---------------------------------------~~~----~-------~sq~~~alAl~~gl~p 344 (509)
T PF05592_consen 315 NRHFWDPEKG---------------------------------------GYA----D-------GSQHANALALLFGLVP 344 (509)
T ss_dssp HHHCEETTTT---------------------------------------EEC----T-------TSHCHHHHCHHCCHC-
T ss_pred HHhccCcccC---------------------------------------ccc----C-------CchHHHHHHHHhchhh
Confidence 9999954322 110 0 1135677899999998
Q ss_pred HHHH-HHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHH
Q 035779 505 PAQA-TAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKR 583 (659)
Q Consensus 505 ~eqa-~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ 583 (659)
+++. .++.+.+.+ .+...+ .++ -.|.+ -..++..++.++|+.+.|.+
T Consensus 345 ~~~~~~~~~~~l~~----~~~~~~------------~~~-------------~~g~~---g~~~~~~~L~~~g~~~~a~~ 392 (509)
T PF05592_consen 345 EEERAAAALKRLAK----RIAANG------------YHL-------------STGFI---GSPYLLEALFRAGRADGAYD 392 (509)
T ss_dssp HHHHTCHCHCHCHH----CCHCCC------------HS---------------TCCC----CHHHHHHHHHCCHHCCHHH
T ss_pred hhhhHHHHHHHHHH----HHHhcC------------CCc-------------Ccccc---cHHHHHHHHHHcCCHHHHHH
Confidence 7765 666665532 111111 111 11221 34567889999999888888
Q ss_pred HHHHH-----HHHhcCC--CCCccccCCCCCCCCCCCCccchHHHH-HHHHHHHHhc-CCChhhhccchhhhcc
Q 035779 584 AIELA-----EQRLSKD--GWPEYYDGKTGRYVGKQARKYQTWSIA-GYLVAKMMVE-NPSNLLMISLEEDKKI 648 (659)
Q Consensus 584 ll~~~-----~~~l~~~--~~pE~fDG~~g~p~G~~ac~~QAWSaA-~~L~a~~lL~-~P~~~~~~~~~~~~~~ 648 (659)
++... ...+..+ -+.|.|++..+.+...+ ...+|+++ .+.+..+++| +|...|.-.+.-.|.+
T Consensus 393 ~~~~~~~~~w~~ml~~g~tT~wE~w~~~~~~~~~~S--~~H~w~~~p~~~l~~~v~GI~p~~pG~~~~~i~P~~ 464 (509)
T PF05592_consen 393 LLTQRDYPSWGYMLDQGATTLWEYWDGDGGDPPNRS--LCHAWSAGPTYWLYRYVLGIRPTEPGFKEFRIAPQP 464 (509)
T ss_dssp HHHHHHHHHCHHHHCTT-SS--SS-STT-TCTT-S---SSBGGG-THHHHHHHCTS-EEESSGGGSEEEE----
T ss_pred HHHhccccchhHHHhCCCCEEEEecCccCCCCCCCC--CCCCcchhHHHHHHHHhhceEeCCCCCcEEEEEEec
Confidence 87642 2333332 36899997542222222 46789988 6678888999 9999998887666554
No 20
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.44 E-value=2.4e-11 Score=139.47 Aligned_cols=312 Identities=17% Similarity=0.126 Sum_probs=206.1
Q ss_pred CCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCc-cCCcceecccccccccccccCCCCC
Q 035779 227 NYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGV-MPASFKVLFNSHQQKETLVADFGGS 305 (659)
Q Consensus 227 nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~Gl-iP~~fki~h~p~~~~e~~~~dfG~~ 305 (659)
.|.-||+||+.+++++|+.. |..+.++.++..+.+.|.....+...-..+|- ++. .-.+-.|.
T Consensus 281 dY~y~W~RD~~~~~~AL~~~--G~~~~a~~~f~~l~~~~~~~~~~~~~y~~~g~~~~~-------------~w~~~~~~- 344 (612)
T COG3387 281 DYRYVWPRDASYAALALLAI--GYKKEALRFFEFLPDVQTPNGKLYHKYSIDGSDLAE-------------SWLPVSGY- 344 (612)
T ss_pred CceEEccCcHHHHHHHHHHc--CCHHHHHHHHHHHHHhhCCCCceeeEEecCCCcccc-------------ccccccCC-
Confidence 59999999999999999997 99999999999999988775321111112220 000 00000000
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc---cHHHHHHHHHHHHhccCC--CCCcCCcccccCCCCcccccCCCCC
Q 035779 306 AIGRVAPVDSGFWWIILLRSYTKCTRDYALAE---LPEVQRGMKLILNLCLSD--GFDTFPTLLCADGCSMIDRRMGIYG 380 (659)
Q Consensus 306 aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~---~p~vq~aL~~Il~~~~~d--Gf~~~p~Ll~~Dg~~~mD~~m~r~G 380 (659)
....-.-+|-+.+-.+++..|++..+|.-+.. +.-+..+-+++.+ ++.. +.. .++..- |-.|.|
T Consensus 345 ~~~~pv~~~~~a~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~p~~~~----WEer~g 413 (612)
T COG3387 345 YNSFPVRIGNTALVQGALDVYGSIMNDIYFYAKYYAIYILPAADYLRR-MEKIKANLP------TPDFDL----WEERGG 413 (612)
T ss_pred CCCCceEEcchhhHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH-HHhhhcCCC------CCccce----ecccCC
Confidence 00111235888899999999999999987766 3445555556555 3111 111 223223 334677
Q ss_pred CchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCC
Q 035779 381 YPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDS 460 (659)
Q Consensus 381 ~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~ 460 (659)
+-.+..+.-|.||.+++.||+.. +++..++.+...+..+++.+.+.++...
T Consensus 414 ~~~yt~~~~~agLd~A~~lA~~~-gd~~~a~~~~~~ad~ik~~v~~~~~~~~---------------------------- 464 (612)
T COG3387 414 HFTYTKATVYAGLDAAADLAEEF-GDKGSAEHWRKTADELKEAVLRRGYAED---------------------------- 464 (612)
T ss_pred cccchHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHhccccc----------------------------
Confidence 77888999999999999999999 4778899999999999998887776432
Q ss_pred CCccccccccCCCceEEeeecC--C-cccccccccchhHHHhcCCC--CHHHHHHHHHHHHHHHHhhhcCCCcccccCCC
Q 035779 461 IPDWVFDFMPLRGGYLIGNVSP--A-RMDFRWFLVGNCIAILSSLA--TPAQATAIMDLIEERWEDLIGEMPLKISYPAL 535 (659)
Q Consensus 461 iP~wl~~w~~~~GGYl~g~v~P--~-~~d~RifalGN~LALlsgll--~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~ 535 (659)
+||+.-...+ . -+|.-++. ...+|+. ++.+....++.|++ +|..+-+
T Consensus 465 ------------~~~f~r~~~~~~~~~vDasll~-----l~~fg~i~~~D~~~~~t~~~I~~---~L~~~~~-------- 516 (612)
T COG3387 465 ------------GGYFVRSLGRKPDDTVDASLLG-----LVLFGFIPPDDPRILATVEAIER---ELLVDGG-------- 516 (612)
T ss_pred ------------CCeeehhcCCCccccccHHHhh-----ccccCccCCCCHHHHHHHHHHHH---HHhhcCC--------
Confidence 2333322221 1 11211122 2245654 44566777777764 6664322
Q ss_pred CCCCceEeecCCCCCCCcccccC-CcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCC
Q 035779 536 DGHEWRIVTGYDPKNTRWSYHNG-GSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDG-WPEYYDGKTGRYVGKQA 613 (659)
Q Consensus 536 ~d~~wr~~t~gdp~~rP~SYHNG-gVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~fDG~~g~p~G~~a 613 (659)
+| .||.. .+ .-.+-++ +.|+....+++..+.+.|+.+.|.++++.++++....+ +||=++...|+|.|.
T Consensus 517 ---gi-~RY~~--~~-~d~~~~~~~~w~i~t~Wl~~~~~~~g~~~~a~~ll~~l~~~a~~~gll~EQv~~~~G~~~g~-- 587 (612)
T COG3387 517 ---GI-RRYNN--EY-DDGLGGDNGPWIITTLWLSEYYLALGRLDEAKKLLEWLLAFASPLGLLPEQVDDGSGEPLGA-- 587 (612)
T ss_pred ---cE-EcCcc--cc-ccccCCCCCcceeehhHHHHHHHHccchHHHHHHHHHHHHhcCCCCCcchhhcCCCCccCCC--
Confidence 11 11111 00 1111222 59999999999999999999999999999888777666 599999888888764
Q ss_pred CccchHHHHHHHHHHHHhc
Q 035779 614 RKYQTWSIAGYLVAKMMVE 632 (659)
Q Consensus 614 c~~QAWSaA~~L~a~~lL~ 632 (659)
.|||||-++++.+...+.
T Consensus 588 -~PlawSha~~I~ai~~l~ 605 (612)
T COG3387 588 -FPLAWSHAEFIIAIRELE 605 (612)
T ss_pred -CcchhhhHHHHHHHHHHH
Confidence 799999999998877664
No 21
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=99.38 E-value=5.4e-10 Score=128.96 Aligned_cols=327 Identities=16% Similarity=0.131 Sum_probs=198.7
Q ss_pred CCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCC
Q 035779 227 NYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSA 306 (659)
Q Consensus 227 nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~a 306 (659)
.|.-||.||+..++.+|+.. |..+.++.++..+++.|.. +|..|..+.| +|+ +...+
T Consensus 291 dYryvW~RD~a~~a~AL~~~--G~~~~a~~~~~~l~~~~~~----------~G~~lq~y~v-----dG~----~~~~~-- 347 (648)
T TIGR01535 291 GYHLVWPRDLYQVANAFLAA--GDVDSALRSLDYLAKVQQD----------NGMFPQNSWV-----DGK----PYWTG-- 347 (648)
T ss_pred ceEEEehhhHHHHHHHHHHC--CCHHHHHHHHHHHHHHhcc----------CCCcCceecc-----CCC----CCCCC--
Confidence 38899999999999999997 9999999999999998764 4544543432 221 11111
Q ss_pred CCCcCCCCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhH
Q 035779 307 IGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQ 386 (659)
Q Consensus 307 iG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQ 386 (659)
--.|-+=..|++++.+.+. +..+ -++.++++.+++.+.. | .+| .|.|=-+.|+.-.+-
T Consensus 348 ----iQlD~~g~~i~~~~~l~~~--~~~~-~~~~vk~aadfl~~~~--------p---~p~----~d~WEer~g~~~~T~ 405 (648)
T TIGR01535 348 ----IQLDETAFPILLAYRLHRY--DHAF-YDKMLKPAADFIVKNG--------P---KTG----QERWEEIGGYSPSTL 405 (648)
T ss_pred ----ccccHHHHHHHHHHHHHHc--CcHH-HHHHHHHHHHHHHHcC--------C---CCC----CCcccccCCcCchhH
Confidence 1368877888888777663 2222 2467889999988753 1 122 233334567766777
Q ss_pred HHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCcccc
Q 035779 387 SLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVF 466 (659)
Q Consensus 387 ALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~ 466 (659)
+-.|.||.++++|++..+ +.+.++++++.+..+++.|.+++|.+...+-. ..|..+.. +..-|+.
T Consensus 406 a~v~aaL~~Aa~iA~~~g-~~~~a~~w~~~Ad~i~~~i~~~~~~~~g~~~~------~~~f~r~~------~~~~~~~-- 470 (648)
T TIGR01535 406 AAEIAGLTAAADIAEQNG-DAGSAQKYRETADNWQKLIENWTFTTNGPLGD------GQYYLRIA------GLGDPNA-- 470 (648)
T ss_pred HHHHHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHhCcCCCcccCC------CCeEEEee------cCCCCcc--
Confidence 778899999999999884 45679999999999999999999976522100 00000000 0000100
Q ss_pred ccccCCCceEEeeecCCcc-cccccccchhH-HHhcCCCC--HHHHHHHHHHHHHHHHhhhcCCCc-ccccCCCCCCCce
Q 035779 467 DFMPLRGGYLIGNVSPARM-DFRWFLVGNCI-AILSSLAT--PAQATAIMDLIEERWEDLIGEMPL-KISYPALDGHEWR 541 (659)
Q Consensus 467 ~w~~~~GGYl~g~v~P~~~-d~RifalGN~L-ALlsgll~--~eqa~~Vl~~V~~~~~~Lltp~GL-r~l~Pa~~d~~wr 541 (659)
.+-..+.|.++... +..++ +.+| ...+|+++ +++...-++.|++ +|....+. ..++- |...+|+
T Consensus 471 -----~~~~~~~n~~~~~~~~~~vD--aSlL~L~~~G~~~~dDPri~~Tl~aIe~---~L~~~~~~~g~~~R-Y~~Dgyg 539 (648)
T TIGR01535 471 -----DFLINIANGGGVYPEKEVLD--PGFLELVRLGVKSPDDPHILATLKEIDS---TIKVDTPKGPSWYR-YTHDGYG 539 (648)
T ss_pred -----ccccccccccccCCCCCccC--HHHHHHHHcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCeEEe-cCCCCCC
Confidence 00011111111100 11111 1222 35688765 4566666666653 55432100 01110 1124455
Q ss_pred EeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhcCCC-CCccccCCC---------CCCCCC
Q 035779 542 IVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDG-WPEYYDGKT---------GRYVGK 611 (659)
Q Consensus 542 ~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~fDG~~---------g~p~G~ 611 (659)
.+..+.+.+- -..|-.||-+.++...-.+..|. .|..+++-++.+....+ +||=+...+ |+|.|
T Consensus 540 ~~~~~~~~~~---~~~G~~Wpi~T~~~~~y~l~~~~--~a~~~l~~~~~~a~~~g~lpEQV~d~~~~~~~~~~~G~pt~- 613 (648)
T TIGR01535 540 EPAKTEAYDG---TGKGRLWPLLTGERGHYELAAGK--DATPYLKAMEKFANEGGMIPEQVWDQTDLPSRGLFYGLPTD- 613 (648)
T ss_pred CcCCCCCccC---CcCCceeehhhhHHHHHHHHcCC--hHHHHHHHHHHhcCcCCCcCcccCCCCCCcccccccCCcCC-
Confidence 4443333221 24577899999999988887775 46788888877777766 699885444 33333
Q ss_pred CCCccchHHHHHHHHHHHHh
Q 035779 612 QARKYQTWSIAGYLVAKMMV 631 (659)
Q Consensus 612 ~ac~~QAWSaA~~L~a~~lL 631 (659)
|..|-+||-|+|+.+.+-+
T Consensus 614 -Sa~PL~WsHA~yi~l~~s~ 632 (648)
T TIGR01535 614 -SASPLNWAHAEYVKLLRSN 632 (648)
T ss_pred -ccccchhhHHHHHHHHHHh
Confidence 5689999999999776554
No 22
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=99.19 E-value=9.8e-10 Score=129.59 Aligned_cols=331 Identities=16% Similarity=0.181 Sum_probs=182.0
Q ss_pred CCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccC-CCCCCCCCcCCCCcHHHHHHHHHHHH
Q 035779 249 AEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVAD-FGGSAIGRVAPVDSGFWWIILLRSYT 327 (659)
Q Consensus 249 g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~d-fG~~aiG~v~sVDatLWfIill~~Y~ 327 (659)
-++++++++|.+-+.|. ..+|-||.+- ||.+..+ ...|+ |-- ...+.=-+|-++.++.+++
T Consensus 413 wD~dls~eil~sWl~lm----------~~dGWIpREQ-ILG~EAr---skVP~eF~v----Q~p~~ANPPTl~l~l~~ll 474 (801)
T PF03200_consen 413 WDPDLSLEILASWLDLM----------NEDGWIPREQ-ILGEEAR---SKVPAEFQV----QYPSNANPPTLFLALEKLL 474 (801)
T ss_pred hCHHHHHHHHHHHHHhc----------cccCCchhhh-hcCHhHH---hcCCHHHHc----CCCCCCCCccHHHHHHHHH
Confidence 69999999999988873 2468888754 3321100 01111 110 0111223455677777775
Q ss_pred HHcC-----------Chhhhc--cHHHHHHHHHHHHh--cc-CCCCC--cC-C---ccc--ccCCCCcccccCCCCCC--
Q 035779 328 KCTR-----------DYALAE--LPEVQRGMKLILNL--CL-SDGFD--TF-P---TLL--CADGCSMIDRRMGIYGY-- 381 (659)
Q Consensus 328 ~~TG-----------D~sfl~--~p~vq~aL~~Il~~--~~-~dGf~--~~-p---~Ll--~~Dg~~~mD~~m~r~G~-- 381 (659)
+.-. +.+|++ .|.+++=.+|..+- +. .+.|. +. + .-+ ..-.+.+-| .||.-+
T Consensus 475 ~~~~~~~~~~~~~~~~~~~l~~~yp~L~~~~~wf~~tQ~G~~~~~yrWrGr~~~~~~~lnp~~L~SGlDD--YPRa~~p~ 552 (801)
T PF03200_consen 475 DRLKAEKKSEDNSEEDLEFLRRIYPRLKRWYNWFNTTQAGDIPGSYRWRGRDPTTDRELNPHTLTSGLDD--YPRASHPS 552 (801)
T ss_pred HHHhhccccccchHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCceeEcCCCCCccccccccCcCCCCCC--CCCCCCCC
Confidence 5432 456777 58999999998752 11 11221 00 0 000 000122333 233222
Q ss_pred ----chhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccC
Q 035779 382 ----PIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVI 457 (659)
Q Consensus 382 ----PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~ 457 (659)
-|...+-.+.+.+.|++||..++.. +.+.+..+....|+..+++..|.+..++. |++ .. .
T Consensus 553 ~~e~hvDl~sWMa~~a~~M~~IA~~L~~~-d~~~ef~~~~~~i~~~l~~~hWdeedgfY--yD~--------~~-----~ 616 (801)
T PF03200_consen 553 DSERHVDLTSWMAFFALNMARIALELGKE-DDAYEFFEHFEYISDALNKLHWDEEDGFY--YDV--------GL-----H 616 (801)
T ss_pred ccceechHHHHHHHHHHHHHHHHHHhcCc-ccHHHHHHHHHHHHHHHHHhcCCcccCce--eee--------cc-----c
Confidence 2455666677778899999888433 33333666677888999999998877731 111 10 0
Q ss_pred CCCCC-ccccccccCCCceEEeeec-----CCcccccccccchhHHHhcCCCCH--HHHHHHHHHHHHHHHhhhcCCCcc
Q 035779 458 PDSIP-DWVFDFMPLRGGYLIGNVS-----PARMDFRWFLVGNCIAILSSLATP--AQATAIMDLIEERWEDLIGEMPLK 529 (659)
Q Consensus 458 ~~~iP-~wl~~w~~~~GGYl~g~v~-----P~~~d~RifalGN~LALlsgll~~--eqa~~Vl~~V~~~~~~Lltp~GLr 529 (659)
++.+. .|.... ..|.+-...++ |...-...+-..+++.++.+++++ ++.++|++.+.. -+++.+|||+|
T Consensus 617 ~~~v~l~~~~~~--~~~~~~~~~~r~~~~~~~~~~v~~~Gyvsl~Plll~ll~~ds~~L~~~L~~l~D-~~ef~s~yGir 693 (801)
T PF03200_consen 617 PDAVRLEWKEVL--ENGQFRRELVRVVRGEPQLQLVCHFGYVSLFPLLLGLLPPDSERLERLLERLLD-EDEFWSPYGIR 693 (801)
T ss_pred cccceecccccc--cccccchhheecccCCccccceeeecccCCCchhhccCCCCHHHHHHHHHHhcC-hhhccCCCCCc
Confidence 11000 000000 00100000000 100000011122334567788775 478889999874 36899999999
Q ss_pred cccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCC-----hHHHHHHHHHH--------HHHhcCCC
Q 035779 530 ISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGR-----PQIAKRAIELA--------EQRLSKDG 596 (659)
Q Consensus 530 ~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~-----~~~A~~ll~~~--------~~~l~~~~ 596 (659)
+|+- .++-|... -...+-+|++|.||.-.|.+++.|+.++|. .+.|.++...+ .+.....+
T Consensus 694 SLSk--~~~~y~~~----~~e~d~~YWRGpIW~~~NyL~i~aL~~y~~~~g~~~~~a~~~y~~Lr~nli~nv~~~~~~tg 767 (801)
T PF03200_consen 694 SLSK--SDPFYGPG----ENEHDPSYWRGPIWIPINYLLIEALRRYGYYYGPYQERAKEIYKELRKNLINNVYKEYKRTG 767 (801)
T ss_pred cccC--CCcccccc----CCccCCCcccCccchhhHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9986 34322211 111234799999999999999999999984 23444433322 23333333
Q ss_pred -CCccccCCCCCCCCCCCCccch-HHHHHHHHH
Q 035779 597 -WPEYYDGKTGRYVGKQARKYQT-WSIAGYLVA 627 (659)
Q Consensus 597 -~pE~fDG~~g~p~G~~ac~~QA-WSaA~~L~a 627 (659)
+-|+|++.+|+..|. .+++ ||+..++.+
T Consensus 768 ~~~E~Y~~~tG~g~g~---~~FtGWtslv~~im 797 (801)
T PF03200_consen 768 YFWEQYNPETGRGQGA---HPFTGWTSLVVLIM 797 (801)
T ss_pred cEEEeECCCCCcccCC---CCCCchHHHHHHHH
Confidence 689999999987775 3555 999876544
No 23
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.3e-08 Score=113.45 Aligned_cols=305 Identities=19% Similarity=0.234 Sum_probs=184.9
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHhhccccccccccc-----------cCCCccCCcceecccccccccccc-cCCCCCCC
Q 035779 240 ALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFT-----------LGEGVMPASFKVLFNSHQQKETLV-ADFGGSAI 307 (659)
Q Consensus 240 ~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~-----------~~~GliP~~fki~h~p~~~~e~~~-~dfG~~ai 307 (659)
++++|+ --||+++.+++.|++.=-++.. .++ ..++.+|+.++ | ++++.+ +-||...-
T Consensus 368 sfglll---lfPeLek~~~~~f~~~i~~eD~--~~~v~gy~~~~~~~k~~~~tphDLg----~--~ehs~e~~iy~t~~d 436 (721)
T COG4354 368 SFGLLL---LFPELEKSVMRAFARAIPKEDT--EYRVIGYAFPEAERKKDPATPHDLG----P--NEHSIEKPIYGTYQD 436 (721)
T ss_pred CchHHH---HhHHHHHHHHHHHHHhccccCC--ceeeeeeccchhhccCCCCCCcccC----c--cccchhcccccccCC
Confidence 566666 4899999999999986443321 111 12344676553 1 233332 44442110
Q ss_pred CCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHHhcc-CCCCCcCCcccccCCCCcccccCCCCCCchh
Q 035779 308 GRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLCL-SDGFDTFPTLLCADGCSMIDRRMGIYGYPIE 384 (659)
Q Consensus 308 G~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~~~~-~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVE 384 (659)
.+ -=+|-.+=||.++++|++.|+|.+|++ +|.+.++|+|++...+ .||.....+ ..| .-.|. ..+.|+...
T Consensus 437 ~~-~wkDlgp~fVLlvYrdf~~T~D~eFL~e~y~~iv~~iD~~~~~d~d~DgiP~~~g--~~d--~~fDa-~~i~G~ssy 510 (721)
T COG4354 437 PN-LWKDLGPDFVLLVYRDFKFTNDREFLKEVYPVIVEAIDWLKRFDQDNDGIPENSG--AMD--NTFDA-TRIQGHSSY 510 (721)
T ss_pred ch-hhhhcCCcEEeeehhhhhhcccHHHHHHHHHHHHHHHHHHHhhcccCCCCCcccC--Ccc--ccccc-ceeechhhh
Confidence 10 015666778999999999999999999 7999999999976542 456553322 122 12232 246799999
Q ss_pred hHHHHHHHHHHHHHhcccCCCChH----------HHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhccc
Q 035779 385 IQSLFYFALRCARQMLKPERDGKE----------LIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKF 454 (659)
Q Consensus 385 IQALwY~ALr~aaeLa~~~~~~~~----------~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkf 454 (659)
.-+||..||-++.+|++.++..+. ........+...++.||++.|
T Consensus 511 ~~sl~iaal~A~l~is~~l~~~~~~~a~~e~~~~~~~~y~~~L~~~~e~~~~~Lw------------------------- 565 (721)
T COG4354 511 CGSLFIAALIAALEISKYLLDNAQLEALNEASKNYVDFYNTWLKEAREAFNKYLW------------------------- 565 (721)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------------
Confidence 999999999999999998743311 122223333334444444444
Q ss_pred ccCCCCCCccccccccCCCceEEeeecCCccccccc----ccchhHHHhc---CCCCHHHHHHHHHHHHHHHHhhhcCCC
Q 035779 455 NVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWF----LVGNCIAILS---SLATPAQATAIMDLIEERWEDLIGEMP 527 (659)
Q Consensus 455 ni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~Rif----alGN~LALls---gll~~eqa~~Vl~~V~~~~~~Lltp~G 527 (659)
.|.|+.-+-+-+. + .+ ..|++++-+- .+++.++++++++.|- +|...-
T Consensus 566 -----------------NGkYy~lws~~~~-~--s~lAsQL~Gqfy~~LLgLpdivdhd~~ksal~sIy----~lnf~~- 620 (721)
T COG4354 566 -----------------NGKYYILWSNSGN-D--SVLASQLCGQFYATLLGLPDIVDHDKIKSALESIY----DLNFNA- 620 (721)
T ss_pred -----------------CceeEecccccCc-h--hhhHHHHHhHHHHHHcCCCcccchHHHHHHHHHHH----hhcccc-
Confidence 3566665422111 0 11 2344444444 4688999999999984 344211
Q ss_pred cccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhcCCC----CCccccC
Q 035779 528 LKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDG----WPEYYDG 603 (659)
Q Consensus 528 Lr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~~~~----~pE~fDG 603 (659)
-..|.|....+ .|.|. +|.|-|-=++||-++..+++-+.+.|..+++.++-+...+++-..+ -||-.++
T Consensus 621 ~~~~~~n~v~~------dgsp~-n~~svq~~s~W~gi~F~laa~m~~~Gm~de~~~~~e~~w~~l~~ng~~fr~p~aIna 693 (721)
T COG4354 621 SEYCAANGVRP------DGSPV-NPLSVQPLSVWPGINFALAAHMIQMGMKDEGFELAENVWNQLKNNGLQFRQPSAINA 693 (721)
T ss_pred ccccccCccCC------CCCcC-CcccccccccccchHHHHHHHHHHhcchhhhhHHHHHHHHHHHhCCcccCChhheee
Confidence 12233322211 23443 4578899999999999999999999998887777776655554333 3665554
Q ss_pred CCCC------CCCCCCCccchHHHH
Q 035779 604 KTGR------YVGKQARKYQTWSIA 622 (659)
Q Consensus 604 ~~g~------p~G~~ac~~QAWSaA 622 (659)
-.|+ ++| ++-.|++=
T Consensus 694 v~g~~~~l~~yv~----~~s~W~l~ 714 (721)
T COG4354 694 VGGETNRLSHYVG----SPSIWALL 714 (721)
T ss_pred ccceeeehhhccC----CchHHHHH
Confidence 3332 333 46677753
No 24
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=98.75 E-value=9.1e-07 Score=98.16 Aligned_cols=198 Identities=17% Similarity=0.159 Sum_probs=113.1
Q ss_pred HHHHHHhhhccc----cCccceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCCHHH---------------HHHH
Q 035779 197 ALERLKKSYVYF----KGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEI---------------VKNF 257 (659)
Q Consensus 197 a~~~l~~s~v~~----~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~pei---------------ar~~ 257 (659)
+++++.||+... ++...|.|.|.. +...+.|.-+|.||+.+++.++... |..+. .+++
T Consensus 3 ~~~~~~rs~~~l~l~~~~~~~GaiiAsp-s~s~pdY~y~W~RD~a~~~~al~~~--g~~~~~~~~~~~l~~~~~~~~~~~ 79 (448)
T PF00723_consen 3 YLDAVYRSALTLKLLTQEPITGAIIASP-STSLPDYRYCWVRDAAYTAYALWAL--GYRDEARAFFYELEQSLVKLMRGY 79 (448)
T ss_dssp HHHHHHHTBTTTHTTBTTSSTT-B-S-S-SBSSSBTCSEEHHHHHHHHHHHHHH--T-H--HHHHHTTT-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCCeEEeec-ccCCCCCceeecccHHHHHHHHHHh--hhhHHHHHHHhhhhHhhhhhhhhh
Confidence 567778877643 333266666531 2233599999999999999999865 63322 2345
Q ss_pred HHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc
Q 035779 258 LLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE 337 (659)
Q Consensus 258 L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~ 337 (659)
|....++|+.......+. .|. -||.|... ....+.-|..+.|+ --.|.+-.+++++.+|.+ .| ..+..
T Consensus 80 l~~~~~~~~~~~~~~~~~-----~~~---~L~~~~~~-~~~~~~~g~~~w~~-~Q~D~~gl~l~~l~~~~~-~g-~~~~~ 147 (448)
T PF00723_consen 80 LQPMYRQQGKVNPSGEFQ-----SPE---GLHEPGYN-VSGPVRVGNPAWGR-PQNDGPGLRLLALWQYID-SG-LQIIY 147 (448)
T ss_dssp HHHHHHHHTS-BTTB-TT-----TTG---GGGTTEEE-TTSEBTTS-B-ES---BTHHHHHHHHHHHHHHH-TT-HHHHH
T ss_pred hhhhhhhcCccCCCcccc-----Ccc---ccccceec-CCCCcccCchhccC-cCCCchHHHHHHHHHHHH-cC-CCccc
Confidence 566666666522111111 110 11222000 00111112111222 147999999999999943 33 33322
Q ss_pred --cHH--HHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchh--hHHHHHHHHHHHHHhcccCCCChHHHH
Q 035779 338 --LPE--VQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIE--IQSLFYFALRCARQMLKPERDGKELIE 411 (659)
Q Consensus 338 --~p~--vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVE--IQALwY~ALr~aaeLa~~~~~~~~~a~ 411 (659)
++. ++..++++.+......|+ -|=-+.|..-. ..+.-+.||..++.+++.+ ++...++
T Consensus 148 ~~~~~~~I~~~~~yi~~~w~~pd~d---------------lWEe~~g~~~f~~S~~~~~~AL~~a~~~a~~~-g~~~~~~ 211 (448)
T PF00723_consen 148 TYWEVSFIKNDLDYIERNWREPDFD---------------LWEERNGIHFFTASSAMQWAALLRAANLAELF-GDPGDAE 211 (448)
T ss_dssp THHHHHTHHHHHHHHHHHTTSBEE----------------TTSS-EEEEHH--HHHHHHHHHHHHHHHHHHT-T-HHHHH
T ss_pred ccchhHHHHHHHHHHHHHcCCcCCc---------------cccccCCCCccchhHHHHHHHHHHHHHHHHHc-CCchHHH
Confidence 455 788888887765332222 12235666655 6777899999999999988 6677788
Q ss_pred HHHHHHHHHHHHHH
Q 035779 412 RIDKRITALSYHIQ 425 (659)
Q Consensus 412 ~l~~ra~~Lk~~~~ 425 (659)
.+.+.+.++++.+.
T Consensus 212 ~~~~~a~~i~~~l~ 225 (448)
T PF00723_consen 212 RWRETADEIRERLE 225 (448)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 88888888888884
No 25
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.74 E-value=1.8e-06 Score=96.64 Aligned_cols=314 Identities=20% Similarity=0.265 Sum_probs=195.3
Q ss_pred CCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCC
Q 035779 226 LNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGS 305 (659)
Q Consensus 226 ~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~ 305 (659)
-.|..+++=|+...++|++-. |+.++|+..+..|+-+ + ...|.|||.-+-
T Consensus 167 GRF~ElYyWDsYf~~lGL~es--gr~d~a~~Mv~nF~~~------I----e~yG~IpNgnRt------------------ 216 (558)
T COG1626 167 GRFNELYYWDSYFTMLGLAES--GRWDLAKGMVDNFAYE------I----ETYGHIPNGNRT------------------ 216 (558)
T ss_pred cccccchHHHHHHHHHHHhhc--CcHHHHHHHHHHHHHH------H----HHhccccCCcee------------------
Confidence 368899999999999999997 9999999999888853 3 346888883320
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc-cHHHHHHHHHHHH--------------hccCCCCC-----------c
Q 035779 306 AIGRVAPVDSGFWWIILLRSYTKCTRDYALAE-LPEVQRGMKLILN--------------LCLSDGFD-----------T 359 (659)
Q Consensus 306 aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~-~p~vq~aL~~Il~--------------~~~~dGf~-----------~ 359 (659)
||- +-=.++.|-..+-.+++-.|+..+.+ .+.+++....++. ..+.||+. .
T Consensus 217 YyL---sRSQPPff~~Mv~~~~~~~g~~~~~r~l~~~~key~~w~~~~~~l~~~~~~~~~~~~~dG~~pe~ln~y~dd~~ 293 (558)
T COG1626 217 YYL---SRSQPPFFALMVELVAEHEGVAALKRYLPALIKEYAYWMDGVPSLQPKQGYSRVVTLGDGSPPEVLNRYWDDRD 293 (558)
T ss_pred eEe---ecCCCCcHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHhccCcccCccccceeEEecCCCCchhhhhhhhcccC
Confidence 110 11223345555556666667443333 3555555533332 01222331 0
Q ss_pred CCc---------------------ccccC------CCCcccccCCCC----------CCchhhHHHHHHHHHHHHHhccc
Q 035779 360 FPT---------------------LLCAD------GCSMIDRRMGIY----------GYPIEIQSLFYFALRCARQMLKP 402 (659)
Q Consensus 360 ~p~---------------------Ll~~D------g~~~mD~~m~r~----------G~PVEIQALwY~ALr~aaeLa~~ 402 (659)
.|. +...| |-+---|+++.. =.|++.|++.|.-....+.+.+.
T Consensus 294 tpr~Esy~~t~~~a~~~~~r~~~eiy~~dRA~reSGwD~ssRw~g~~~~LasIrt~~~~p~dlna~~y~~e~~~~~~~~~ 373 (558)
T COG1626 294 TPRQESYHETIATAKHNPERPLDEIYRDDRAGRESGWDFSSRWLGVPAPLASIRTTSILPVDLNALLYKLEEIIANISAI 373 (558)
T ss_pred CccchhhhhhHHHhhcCcCCChHhhhcchhhhHhccCcccccccCCCccccceeccccchhhhhhHHHHHHHHHHHHHHh
Confidence 000 00000 000000111111 14689999999999999998887
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecC
Q 035779 403 ERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSP 482 (659)
Q Consensus 403 ~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P 482 (659)
. ++.+.++.+.+++++-+..|++++|.++..+-. +|. | ++
T Consensus 374 ~-~~~~~~e~~~~~A~~R~~aI~~ylW~~e~G~~~--DYd-------------------------~---k~--------- 413 (558)
T COG1626 374 K-GDKETAERYQRKAEARRCAINKYLWDDEAGQYN--DYD-------------------------W---KL--------- 413 (558)
T ss_pred c-CchHHHHHHHHHHHHHHHHHHHHccccccceee--hhh-------------------------h---hc---------
Confidence 7 577889999999999999999999988665211 110 1 00
Q ss_pred CcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcch
Q 035779 483 ARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWP 562 (659)
Q Consensus 483 ~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP 562 (659)
.+.- .-+...++++++.|+++++|++++++.+.. .|..|-||-++.| .. -+-|=|=|| |+
T Consensus 414 ~~~~-~y~~a~~~~plw~G~a~~era~~~a~~~~~---~l~~pGGl~ast~--~s------------~~QWD~PNg--Wa 473 (558)
T COG1626 414 KKRR-AYLSAAALWPLWVGLATPERAQRLADAALS---MLEQPGGLSASTP--RS------------GQQWDYPNG--WA 473 (558)
T ss_pred cccc-cccchhhhhhccCCCCCHHHHHHHHHHHHH---HhcCCCceecccc--cc------------cccccCCCC--Cc
Confidence 0000 023456678999999999999999999864 6888888887777 21 234556676 99
Q ss_pred hhHHHHHHHHHHcCChHHHHHHHHHHHHH---hcC--CCCCccccCCCCC-CCCCCCC-cc---chHHHHHHHHHHHHhc
Q 035779 563 VLLWLLTAASIKTGRPQIAKRAIELAEQR---LSK--DGWPEYYDGKTGR-YVGKQAR-KY---QTWSIAGYLVAKMMVE 632 (659)
Q Consensus 563 ~llg~~~~Al~k~G~~~~A~~ll~~~~~~---l~~--~~~pE~fDG~~g~-p~G~~ac-~~---QAWSaA~~L~a~~lL~ 632 (659)
=+.|+.+.++.++|....|.++....+.. +-+ +.+-|-||=..+. +.|..+| .. ..|+-+.++.+..+++
T Consensus 474 Plq~ia~~gL~ryG~~~la~~ia~rwL~~v~~~~d~~~~~VEKydv~~~~~~~g~~geyp~q~GFGWtNgv~l~lL~~~~ 553 (558)
T COG1626 474 PLQWIATQGLKRYGYDILADDIARRWLTNVEQFYDYEGKLVEKYDVSRGTGPGGGGGEYPLQDGFGWTNGVVLKLLDLYG 553 (558)
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccceeEeeecccccCCCCCcccCCcccccchhHHHHHHHHhhC
Confidence 99999999999999887777766654322 221 3345655532211 1122223 23 4799998887766654
No 26
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.63 E-value=8.6e-07 Score=100.71 Aligned_cols=328 Identities=13% Similarity=0.193 Sum_probs=202.2
Q ss_pred CCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCC
Q 035779 226 LNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGS 305 (659)
Q Consensus 226 ~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~ 305 (659)
-.|.++++=|+...+.|+|.. +..+.||+.+..+..+ ++ ..|.|||.=++.
T Consensus 181 gRF~E~YyWDsywii~GLl~S--~m~~takGmieNf~~l------V~----~yG~ipNg~R~Y----------------- 231 (600)
T KOG0602|consen 181 GRFRELYYWDSYWIIKGLLAS--QMFDTAKGMIENFISL------VD----TYGFIPNGGRVY----------------- 231 (600)
T ss_pred CceeeeecccHHHHHHhHHhh--cccHHHHHHHHHHHHH------HH----hcCcccCCCeee-----------------
Confidence 488999999999999999997 9999999999988875 43 368999843221
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHcCChhhhcc--HHHHHHHH-HHHHhc---cCCC--CCcCC--------c-------
Q 035779 306 AIGRVAPVDSGFWWIILLRSYTKCTRDYALAEL--PEVQRGMK-LILNLC---LSDG--FDTFP--------T------- 362 (659)
Q Consensus 306 aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~--p~vq~aL~-~Il~~~---~~dG--f~~~p--------~------- 362 (659)
|..| =..+.+...+.+|++.|+|.+|+++ +.++.=++ |....+ ..+| +.-|. .
T Consensus 232 Yl~R----SQPPllt~Mv~~~y~~t~~~~~~~~~l~tl~kEy~fw~~~~~~~~~~~~~~l~~y~~~~~~prPEsy~~d~e 307 (600)
T KOG0602|consen 232 YLNR----SQPPLLTGMVYEYYEATNDEQFLKRALPTLIKEYEFWTNNRTEDVKDEGKVLSRYRVMGSGPRPESYREDFE 307 (600)
T ss_pred eecc----CCCchhhhhHHHhhhccCcHHHHHHHHHHHhhheecccCCCccccccCCceeEEEeccCCCCCCcchHHHHH
Confidence 1122 3455778899999999999999873 33333333 322211 1112 21110 0
Q ss_pred ------------ccc-------cCCCCcccccCCCCC----------CchhhHHHHHHHHHHHHHhcccCCCChHHHHHH
Q 035779 363 ------------LLC-------ADGCSMIDRRMGIYG----------YPIEIQSLFYFALRCARQMLKPERDGKELIERI 413 (659)
Q Consensus 363 ------------Ll~-------~Dg~~~mD~~m~r~G----------~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l 413 (659)
.++ ..|.+.--|++..+| .||-.|+|..+.++.++.+.... |+.+.+...
T Consensus 308 ~~e~~~t~~~~~~~~~~l~~~aesg~DfSsrw~~~~~t~~~~~t~~~vpvDLN~~~~~~~~i~~y~~~~~-Gd~~~s~~~ 386 (600)
T KOG0602|consen 308 TAEHLKTEKEKQQLYQDLAAAAESGWDFSSRWFAVNGTLSSIGTTDLVPVDLNLLYKWNADIMKYFYVVD-GDPKDSAQF 386 (600)
T ss_pred HHhcccchHHHHHHHHHHhhcCcccchhHHHhhccCCcccccccccccccchHHHHHhhHHHHhhhcccC-CChhHHHHH
Confidence 000 111222223444444 47899999999999999998887 667889999
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccc
Q 035779 414 DKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVG 493 (659)
Q Consensus 414 ~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalG 493 (659)
+++.++++..|++.+|.|.... .|+| ++.+.... +-|...
T Consensus 387 ~~k~~~r~~~i~~vlWde~~g~--w~DY-------------------------------------d~~~~~~~-~~~~~s 426 (600)
T KOG0602|consen 387 EKKSEQRRAAIQEVLWDEEDGA--WFDY-------------------------------------DLELKKHN-TYFYAS 426 (600)
T ss_pred HHHHHHHHHHHHHhccCCCCCc--ceec-------------------------------------cccccccC-CCcCch
Confidence 9999999999999999876441 1222 12221111 124557
Q ss_pred hhHHHhcCCCCHHH----HHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHH
Q 035779 494 NCIAILSSLATPAQ----ATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLT 569 (659)
Q Consensus 494 N~LALlsgll~~eq----a~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~ 569 (659)
|+++++.++.++.+ ++.+++.++. .| .|.+ ++-.+.+.+ .--.-|=|-| +||=...+.+
T Consensus 427 n~~Pl~~~~~~~~~~~~~~~~v~~~le~--------~g--~~~~----p~giP~Sl~-~s~eQWD~Pn--~WaP~q~m~~ 489 (600)
T KOG0602|consen 427 NFAPLWAGCYPAPDDDKSVDKVLDYLEK--------SG--ALTF----PGGIPTSLS-NSGEQWDFPN--GWAPNQHMAI 489 (600)
T ss_pred hhhhhhccCCCcccccchHHHHHHHHHH--------cC--CcCC----CCCCcccCC-CchhhccCCC--CCCcceehhh
Confidence 88899999988544 4455555543 12 1111 111122211 1123344555 4999999999
Q ss_pred HHHHHcC---ChHHHHHHHHHHH----H-HhcCCCCCccccCCC--CCCCCC---CCCccchHHHHHHHHHHHHhcCCCh
Q 035779 570 AASIKTG---RPQIAKRAIELAE----Q-RLSKDGWPEYYDGKT--GRYVGK---QARKYQTWSIAGYLVAKMMVENPSN 636 (659)
Q Consensus 570 ~Al~k~G---~~~~A~~ll~~~~----~-~l~~~~~pE~fDG~~--g~p~G~---~ac~~QAWSaA~~L~a~~lL~~P~~ 636 (659)
.++.++| ..+.|.++..... . .....+..|=||-.. +.+.|. .-....+|+.|.+|....-.++.-.
T Consensus 490 ~gl~~~~~~~~~~~A~kla~~wl~~~~~~~~~~g~~~EKY~vt~~~~~~G~ggEY~~QeGFGW~Ng~il~~L~~~g~~~~ 569 (600)
T KOG0602|consen 490 EGLRRAGNQELQEVALKLAQRWLETNFAVFVDSGGMFEKYDVTRDPGPHGGGGEYEVQEGFGWTNGVILDLLKKYGSDLR 569 (600)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHhhhhhcccCceeEeeccccCCCCCCCCCccccccCCCccchhHHHHHHHcCCccc
Confidence 9999999 4556666555431 2 223455789888533 222221 1226678999999977777774433
Q ss_pred h--hhccchh
Q 035779 637 L--LMISLEE 644 (659)
Q Consensus 637 ~--~~~~~~~ 644 (659)
. ....+++
T Consensus 570 ~~~a~~~c~~ 579 (600)
T KOG0602|consen 570 RGEACCACDE 579 (600)
T ss_pred ccchhhccCC
Confidence 3 4444444
No 27
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=98.09 E-value=7.8e-05 Score=82.42 Aligned_cols=343 Identities=18% Similarity=0.204 Sum_probs=173.4
Q ss_pred cCccceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccc----c--CCCccC
Q 035779 209 KGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFT----L--GEGVMP 282 (659)
Q Consensus 209 ~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~----~--~~GliP 282 (659)
.+.+.-+|...|= ...|-||+.--+.-.+..-..++ ..+..++-+.+.|..--.+|+|. + +-|+-|
T Consensus 29 ~~~~~tFViTGDI-------pAmWLRDS~~Q~~pYl~l~~~d~-~l~~li~G~I~rQa~~I~~dPYaNAF~~~~~s~~~~ 100 (424)
T PF06824_consen 29 DEDPDTFVITGDI-------PAMWLRDSAAQLRPYLPLAKEDP-SLARLIRGVINRQARYILIDPYANAFNPPPESGIPP 100 (424)
T ss_dssp TSTSEEEE-SBSS-------SSEEHHHHHHHCGGGGGGGCC-H-HHHHHHHHHHHHHHHHHHH-TT-SEEESS-----TS
T ss_pred CCCCCeEEEecCc-------hhhhccccHhHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHhcchhhcccCCcccccccc
Confidence 5666777777761 26899998765543322101344 45556666677887766667776 1 112222
Q ss_pred CcceecccccccccccccCCCCCC-CCCcCCCCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhc---cC----
Q 035779 283 ASFKVLFNSHQQKETLVADFGGSA-IGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLC---LS---- 354 (659)
Q Consensus 283 ~~fki~h~p~~~~e~~~~dfG~~a-iG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~---~~---- 354 (659)
+.-.. + ..+...+.|.... .-|=..+|+--.||.+.+.|++.|||.+|+... ..+|++.|++.. ..
T Consensus 101 ~~~~~-~----~~D~~~~~~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~~-~~~A~~~il~~~~~eq~~t~~ 174 (424)
T PF06824_consen 101 NGNGH-W----QSDTTEMPYDPPWVWERKYELDSLCYFLQLAYQYWKATGDTSFFDED-WLRAVRLILDTWRTEQRPTYD 174 (424)
T ss_dssp S-TSG-C----CGSBS------TTEEE----HHHHHHHHHHHHHHHHHH--GTTSSHH-HHHHHHHHHHHHHHTTG----
T ss_pred cccCC-C----CCCccCCCcCCCceeeecchhhhhhHHHHHHHHHHHhhCChhhhhHH-HHHHHHHHHHHHHHHHHhhhc
Confidence 21100 0 0011111110000 001136899999999999999999999999854 888888887732 11
Q ss_pred -CC--------CCcC-----CcccccCC-------CCcccc---c---CCCCCCchhhHHHHHHHHHHHHHhcccCCCCh
Q 035779 355 -DG--------FDTF-----PTLLCADG-------CSMIDR---R---MGIYGYPIEIQSLFYFALRCARQMLKPERDGK 407 (659)
Q Consensus 355 -dG--------f~~~-----p~Ll~~Dg-------~~~mD~---~---m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~ 407 (659)
++ |... .+| ..+| ..|+.+ + .-++|+.|--|+++..+|+.+++|+..+..+.
T Consensus 175 ~~~~~~~s~Y~F~R~~~~~tdtl-~~~G~G~pv~~tGli~S~FRPSDDa~~y~yliPsNm~a~v~L~~laei~~~~~~~~ 253 (424)
T PF06824_consen 175 EDHEGLPSPYRFQRPTCRPTDTL-PNDGRGNPVAYTGLIWSGFRPSDDACIYPYLIPSNMFAVVALEYLAEILRALGWDD 253 (424)
T ss_dssp --SSSCS-S---BESBSSGGGS--HHHHT-S----SSS-B-SB-TTSSB-SSSEEHHHHHHHHHHHHHHHHHHHHTT-TH
T ss_pred cccccCCCcceeeccCCCCCccc-cCCCcCCcCCCCCceecCcCCCCcchhcCcCChHHHHHHHHHHHHHHHHHHhccch
Confidence 11 1100 001 0010 011111 0 14567888999999999999999999764443
Q ss_pred --HHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcc
Q 035779 408 --ELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARM 485 (659)
Q Consensus 408 --~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~ 485 (659)
++++++++.+.++++-|.+|.=++...+.+||.|...-||. ++. |
T Consensus 254 ~~~la~~~~~la~eI~~gI~~~giv~h~~~g~iyAYEVDG~G~--------------------------~~~-------m 300 (424)
T PF06824_consen 254 SAELAERARALADEIRAGIEKHGIVEHPKFGKIYAYEVDGFGN--------------------------HLL-------M 300 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE-SEE-SSS---------------------------EE---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEEEEEecCCCC--------------------------ccc-------c
Confidence 57888888888899999999987766666677665433432 211 1
Q ss_pred cccccccchhHHHh-cCCCCHH--HHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcch
Q 035779 486 DFRWFLVGNCIAIL-SSLATPA--QATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWP 562 (659)
Q Consensus 486 d~RifalGN~LALl-sgll~~e--qa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP 562 (659)
|- -+.+++|+++ .|-.+.+ --+.-.+.| |+|.- .+- .+.|....--.|=|=|.-+.
T Consensus 301 DD--ANvPSLLSlPylGf~~~~DpvYqnTR~~i---------------LS~~~-NPy---y~~G~~~~GiGsPHt~~~~i 359 (424)
T PF06824_consen 301 DD--ANVPSLLSLPYLGFCSKDDPVYQNTRRFI---------------LSPEG-NPY---YFSGKAASGIGSPHTPPGYI 359 (424)
T ss_dssp ----SSSS-STTHHHHTSS-TT-HHHHHHHHHH---------------TSTT--STT---EEEESSEEEE--TTT-TTEE
T ss_pred CC--CCCchHhhhhhcCCCCCCcHHHHHHHHHH---------------hCCCC-CCc---cccCCCcCCCCCCCCCCCCc
Confidence 10 1355666664 5665432 222222222 34420 110 00111111112336666555
Q ss_pred hhHHHHHHHHHHcCChHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHH
Q 035779 563 VLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDG-WPEYYDGKTGRYVGKQARKYQTWSIAGY 624 (659)
Q Consensus 563 ~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~fDG~~g~p~G~~ac~~QAWSaA~~ 624 (659)
|.++.++.++.- ...++..+.|+.+.+--...+ +.|-||-.++. +-.+.+.+|+-+.|
T Consensus 360 WPmsl~~~~lTs-~d~~Ei~~~L~~L~~t~~gtGlmHES~d~~~~~---~~TR~WFaWaNslF 418 (424)
T PF06824_consen 360 WPMSLAMQGLTS-DDDEEIRECLRMLKRTTAGTGLMHESFDVDDPS---KFTRPWFAWANSLF 418 (424)
T ss_dssp EHHHHHHHHHT--S-HHHHHHHHHHHHHTSTTSSS--SEEETTEEE---EEE-S-BHHHHHHH
T ss_pred cHHHHHHHHhcC-CCHHHHHHHHHHHHhccCCCCceeccccCCCCc---ccCcHHHHHHHHHH
Confidence 666776666554 345566666666654433333 58999977642 11246999998754
No 28
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=97.83 E-value=0.0001 Score=84.79 Aligned_cols=245 Identities=17% Similarity=0.230 Sum_probs=149.3
Q ss_pred CcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHHhc-cCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHH
Q 035779 314 DSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLC-LSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFY 390 (659)
Q Consensus 314 DatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~~~-~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY 390 (659)
|-.+=|++-+++=+..|||..|++ +|.|..+|+.+++++ ++||.++..+ .+|. -.|.| -..|...+--+||.
T Consensus 557 DLN~KFVLqvYRD~~~tgd~~flk~~wpsv~~ime~l~~fDKD~DGmIEN~G--fpDQ--TYD~W-~~tGvSAYCGgLWl 631 (879)
T KOG2119|consen 557 DLNLKFVLQVYRDYVATGDEKFLKAVWPSVYAIMEYLEQFDKDNDGMIENEG--FPDQ--TYDAW-SMTGVSAYCGGLWL 631 (879)
T ss_pred hcCceeEEEEEeeeEEeccHHHHHHHHHHHHHHHHHHHhhcccCCcccccCC--CCCc--cccce-EEecchhhhhHHHH
Confidence 444447888888888999999999 899999999999887 5568876544 3331 22333 23577778899999
Q ss_pred HHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCcccccccc
Q 035779 391 FALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMP 470 (659)
Q Consensus 391 ~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~ 470 (659)
.||+++.+||... |++.......+++++-+..+.+..|... -|+|
T Consensus 632 AALqa~~amA~~~-g~~~~~~~f~~klekak~~ye~kLWNGs-----Yfny----------------------------- 676 (879)
T KOG2119|consen 632 AALQAASAMARQI-GDPNTQDYFNNKLEKAKDVYEKKLWNGS-----YFNY----------------------------- 676 (879)
T ss_pred HHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHhhcCCc-----eecc-----------------------------
Confidence 9999999999998 6667777777888877788888888421 1111
Q ss_pred CCCceEEeeec-CC-------cccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceE
Q 035779 471 LRGGYLIGNVS-PA-------RMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRI 542 (659)
Q Consensus 471 ~~GGYl~g~v~-P~-------~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~ 542 (659)
++.+ +. ++-.+||+.+-- +-.|.+.+..++.|+.|.+ ++ -|.. .+..-+.
T Consensus 677 -------D~s~s~~s~sImaDQlaGqWy~~a~g---l~~i~~~~~vrsAL~tIy~----~N-Vm~~-------~~G~~GA 734 (879)
T KOG2119|consen 677 -------DESSSGSSSSIMADQLAGQWYARACG---LPPIFPEEKVRSALDTIYD----FN-VMKF-------KGGRMGA 734 (879)
T ss_pred -------ccCCCCcchhhHHHhHhhHHHHHhcC---CCccCchHHHHHHHHHHHh----hc-eeee-------cCCceec
Confidence 1111 11 111123321110 1226889999999999854 22 0100 0100000
Q ss_pred eecCCCCC--CCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHh-cC------CCCCccccCCC-CCCCCCC
Q 035779 543 VTGYDPKN--TRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRL-SK------DGWPEYYDGKT-GRYVGKQ 612 (659)
Q Consensus 543 ~t~gdp~~--rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l-~~------~~~pE~fDG~~-g~p~G~~ 612 (659)
.-|-.|.- ...+-.---||+=+....++-++.-|..+.+.+...++-..+ +. ..-||-+.... .+-.++.
T Consensus 735 VNGm~p~G~VD~ssiQS~EvW~GvtYalAAtMIqeG~~e~~FqTA~G~y~~~w~~~glg~~FqTPEa~~~~~~yRsl~YM 814 (879)
T KOG2119|consen 735 VNGMLPSGKVDTSSIQSREVWAGVTYALAATMIQEGLVEKGFQTASGIYEAIWSETGLGYAFQTPEAWYMEDEYRSLGYM 814 (879)
T ss_pred cccccCCCccccccceehhhhccHHHHHHHHHHHHhhHHhhhhhhhhhHHHHhhhcccceEEECchhhhcchhhhhhhhc
Confidence 10111111 111333456999999999999999999999888887652211 12 12388776643 3444442
Q ss_pred CCccchHHH
Q 035779 613 ARKYQTWSI 621 (659)
Q Consensus 613 ac~~QAWSa 621 (659)
+..--|+.
T Consensus 815 -RPLsIWam 822 (879)
T KOG2119|consen 815 -RPLAIWAM 822 (879)
T ss_pred -chhHHHHH
Confidence 23444554
No 29
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.003 Score=73.46 Aligned_cols=280 Identities=18% Similarity=0.196 Sum_probs=153.0
Q ss_pred HHHHHHHHHHHHHHcC------C--hhhhc--cHHHHHHHHHHHHh--ccC---CCCC-------c----CCccc-ccCC
Q 035779 316 GFWWIILLRSYTKCTR------D--YALAE--LPEVQRGMKLILNL--CLS---DGFD-------T----FPTLL-CADG 368 (659)
Q Consensus 316 tLWfIill~~Y~~~TG------D--~sfl~--~p~vq~aL~~Il~~--~~~---dGf~-------~----~p~Ll-~~Dg 368 (659)
++-.+.+++++++.-. | .+|++ .|.+.+=..|+.+- +.. +||+ + .++.+ ..+-
T Consensus 504 PPTLllav~~~~~~~~~~~~~~~r~~~fL~r~fprLl~~f~Wf~~sQ~G~~~~~~~~~n~~YrWrGR~~~~~t~lnp~~L 583 (849)
T KOG2161|consen 504 PPTLLLAVYRLLNREREMYGREDRSLTFLKRLFPRLLKWFTWFRKSQEGKNVFEEGFDNEGYRWRGRDLPTGTTLNPHCL 583 (849)
T ss_pred CceeHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhhcccCCcccccccccceeEeccCCCCCCceeccccc
Confidence 3445667777765532 2 37888 47788888888752 111 1222 1 11222 1223
Q ss_pred CCcccccCCCCCCc------hhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhcc
Q 035779 369 CSMIDRRMGIYGYP------IEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYK 442 (659)
Q Consensus 369 ~~~mD~~m~r~G~P------VEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~ 442 (659)
..+|| -.||.-+| |+.-+..+-|-|.+-.+++.++............. +.++.+.+.-|.+..+. -++
T Consensus 584 ~SGlD-DyPRAs~Ps~~ElhvDl~~W~~lasrsl~~iae~lg~~~~E~~~a~~e~-~~~e~L~~~HW~ee~~~--y~D-- 657 (849)
T KOG2161|consen 584 SSGLD-DYPRASHPSVLELHVDLRCWVGLASRSLNRIAEFLGETEAEYATAITEL-ECKENLVQNHWSEEDQA--YCD-- 657 (849)
T ss_pred ccccc-ccccccCchHHHHhhhhHHHHHHHHHHHHHHHHHhcchhhhhhhhhhHH-HHHHHHHHhccChhhCe--eee--
Confidence 35666 34666565 45566778888999999998854332222222222 35678888999877662 111
Q ss_pred ccchhhhhhc-ccccCCCCCCccccccccCCCceEEeeec---CCc-ccccccccchhHHHhcCC--CCHHHHHHHHHHH
Q 035779 443 TEEYSHTAVN-KFNVIPDSIPDWVFDFMPLRGGYLIGNVS---PAR-MDFRWFLVGNCIAILSSL--ATPAQATAIMDLI 515 (659)
Q Consensus 443 te~y~~~A~n-kfni~~~~iP~wl~~w~~~~GGYl~g~v~---P~~-~d~RifalGN~LALlsgl--l~~eqa~~Vl~~V 515 (659)
||...++ ..+..|..+. ..+ .++-.|+ |+. ...|.+.--+++.++..| ++.++-.+++++|
T Consensus 658 ---~g~h~~dv~~~~~p~~g~--~~r-------~~~r~v~~~~p~~e~v~~h~GYvSl~P~mlrLlp~~S~rL~~~Ldli 725 (849)
T KOG2161|consen 658 ---FGNHTEDVSITPEPSIGK--QFR-------GLVRRVDWFVPNLELVDRHIGYVSLFPFMLRLLPATSPRLTKLLDLI 725 (849)
T ss_pred ---ccCChhhccccccCCccc--chh-------hhheeccccCCcceeeecccceeehhhhHHhhcCCCchHHHHHHHHh
Confidence 2222211 1111111110 000 0111111 111 000011111222333333 5667888999998
Q ss_pred HHHHHhhhcCCCcccccCCCCCCCceEe-ecCCCCCCCcccccCCcchhhHHHHHHHHHH-cCC-----hHHHHHHHHHH
Q 035779 516 EERWEDLIGEMPLKISYPALDGHEWRIV-TGYDPKNTRWSYHNGGSWPVLLWLLTAASIK-TGR-----PQIAKRAIELA 588 (659)
Q Consensus 516 ~~~~~~Lltp~GLr~l~Pa~~d~~wr~~-t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k-~G~-----~~~A~~ll~~~ 588 (659)
.. -.+|.+|||||+|+- +++=|+-+ ++.+ -+|++|.||=-.|.++..|+.. +.. ...|+++.+.+
T Consensus 726 ~D-~~~lwSpYGlrSLS~--~s~yym~~Nte~d-----~pYWRGpIW~N~NYLiLsaL~~~Y~~~~gp~~~nA~~iyeEL 797 (849)
T KOG2161|consen 726 SD-ENELWSPYGLRSLSR--SSPYYMKRNTEHD-----PPYWRGPIWMNVNYLILSALRHFYLYVPGPYQSNAAKIYEEL 797 (849)
T ss_pred cC-cccccCcchhhhhhh--cCCccccccCCCC-----CcccccceeeehHHHHHHHHHHhcccCCCchHHHHHHHHHHH
Confidence 65 578999999999984 33322222 1222 2799999999999999999999 432 34555555533
Q ss_pred --------HHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHH
Q 035779 589 --------EQRLSKDG-WPEYYDGKTGRYVGKQARKYQTWSIAG 623 (659)
Q Consensus 589 --------~~~l~~~~-~pE~fDG~~g~p~G~~ac~~QAWSaA~ 623 (659)
.+..+..+ +-|+||+.+|+-.|+ +.+-.||+=.
T Consensus 798 RaNlv~Nv~k~~~~tG~~wE~Yd~~tG~G~ga--~~FtGWTaLV 839 (849)
T KOG2161|consen 798 RANLVGNVSKQWQQTGYFWENYDPRTGRGLGA--RHFTGWTALV 839 (849)
T ss_pred HHHHHHHHHHHhhccceeeeecCCCCCCcccc--ccccchHHHH
Confidence 23444444 469999999876664 3566698744
No 30
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=97.31 E-value=0.033 Score=60.59 Aligned_cols=202 Identities=17% Similarity=0.210 Sum_probs=116.1
Q ss_pred CCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCC
Q 035779 230 QVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGR 309 (659)
Q Consensus 230 ~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~ 309 (659)
..|-||+.--+.-.|+. ..+-+..|..+.-+.+.|.+--.+|+|. +.+-+..+.--|..+ .....+--+++
T Consensus 60 AmWLRDStaQvrPYL~l-AkeD~~l~~li~GlvkrQ~~~i~~DPYA--NAFn~~~n~~Ghq~D--~T~m~~~vwER---- 130 (434)
T COG3538 60 AMWLRDSTAQVRPYLPL-AKEDEELRRLIAGLVKRQARYILLDPYA--NAFNETANGAGHQTD--HTEMNPWVWER---- 130 (434)
T ss_pred HHHHhcchhhhccceee-cccCHHHHHHHHHHHHHHHHHhhcChhh--hhcccccccCCcccC--cccccchhhee----
Confidence 68999987766444432 2566666677777778887755566665 211122111111110 00111222222
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhcc-----C-C---CCCc-----CCccc--------ccC
Q 035779 310 VAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCL-----S-D---GFDT-----FPTLL--------CAD 367 (659)
Q Consensus 310 v~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~-----~-d---Gf~~-----~p~Ll--------~~D 367 (659)
=..+|+--..|.+.+.|++.|||.+.+. +...+|++-|++.-. . + .|.- ..+|. ..-
T Consensus 131 KYEiDSLCYPiqLAYl~wk~Tg~t~~Fd-e~f~~a~~~il~~~~~eQ~h~~~spY~F~R~t~r~~dTL~~~G~G~~~a~t 209 (434)
T COG3538 131 KYEIDSLCYPIQLAYLYWKATGDTSQFD-EDFRQAVETILRVWKVEQDHETDSPYRFERDTDRKSDTLGRAGKGAPTAPT 209 (434)
T ss_pred eeeccchhhHHHHHHHHHHhcCCccccC-HHHHHHHHHHHHHHhHhhccCCCCCeeeeccccccchhhhhCCCCCCcCcc
Confidence 2469999999999999999999999776 457777887776320 0 1 1110 00110 111
Q ss_pred CCCccc-cc---CCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhc
Q 035779 368 GCSMID-RR---MGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRY 441 (659)
Q Consensus 368 g~~~mD-~~---m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~ 441 (659)
|.+|-- |+ --.+|+.|=-|.+..--|..+.+|++.+.++.+.+++.+....++++-|.++--++....-.||.|
T Consensus 210 GM~wSgFRPSDDAC~YgYliPsNmFaVVvl~y~~ei~~~~~~~~~~a~~a~~L~~eIq~Gi~~~g~~~~~~~~~iyAy 287 (434)
T COG3538 210 GMTWSGFRPSDDACEYGYLIPSNMFAVVVLSYLQEILEALPHDAEIARQAKELANEIQQGIEQFGKMDHPKGGEIYAY 287 (434)
T ss_pred cceecCcCCCccchhcccccccchhhhhhHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHhceecCCCCCeeEEE
Confidence 222211 00 023677777788888889999999986657777777766666666666666554444443334433
No 31
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=78.47 E-value=1e+02 Score=33.20 Aligned_cols=96 Identities=10% Similarity=0.005 Sum_probs=62.0
Q ss_pred cHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccC---CCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHH
Q 035779 315 SGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLS---DGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYF 391 (659)
Q Consensus 315 atLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~---dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ 391 (659)
..--.|.++..+++.+||...++ ...++++++.+.+.+ +||.. .+..||. . ...++-++.|++...
T Consensus 54 ~~ar~i~~~a~a~~~~~~~~~l~--~A~~~~~fl~~~~~d~~~Gg~~~---~~~~~g~-~-----~~~~~~l~~~a~~l~ 122 (384)
T cd00249 54 LQARQVYCFAVAYLLGWRPEWLE--AAEHGLEYLDRHGRDPDHGGWYF---ALDQDGR-P-----VDATKDLYSHAFALL 122 (384)
T ss_pred EecHHHHHHHHHHHhcCChhHHH--HHHHHHHHHHHhCcCCCCCCEEE---EEcCCCC-C-----cccccchHHHHHHHH
Confidence 33456889999999999998775 488999999987632 23321 1112221 1 113445888998888
Q ss_pred HHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhcc
Q 035779 392 ALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYW 429 (659)
Q Consensus 392 ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW 429 (659)
|+..+.+.. ++++ +.+.+.++-+.+.++||
T Consensus 123 ala~~~~at----~d~~----~l~~A~~~~~~l~~~~~ 152 (384)
T cd00249 123 AAAQAAKVG----GDPE----ARALAEETIDLLERRFW 152 (384)
T ss_pred HHHHHHHhc----CCHH----HHHHHHHHHHHHHHHhc
Confidence 877666553 3333 44456667777888888
No 32
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=75.94 E-value=1.8e+02 Score=34.61 Aligned_cols=142 Identities=16% Similarity=0.096 Sum_probs=75.5
Q ss_pred CcchHHHHHHHHHHhhhccccCccceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCCH----HHHHHHHHHHHhh
Q 035779 189 TGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEP----EIVKNFLLKTLHL 264 (659)
Q Consensus 189 ~~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~p----eiar~~L~~~a~l 264 (659)
..++.++.+++.+++.++.- +.|.+... .+-.++| ||.+++.++.-. |.. +.++..+..+++.
T Consensus 275 ~~~~~~~~~l~~l~~~~~~~---~~g~~~~~------~~~s~~w--DTala~~AL~~a--g~~~~~~~~l~ka~~wL~~~ 341 (634)
T cd02892 275 PDSPAFKRHLERIDDFLWLG---PEGMKMCQ------TNGSQVW--DTALAVQALLEA--GLAPEFDPALKKALDWLLES 341 (634)
T ss_pred CCCHHHHHHHHHHHhcEEEe---cCCcEEEc------CCCCchH--HHHHHHHHHHHc--CCCccchHHHHHHHHHHHHH
Confidence 46788999999998866332 24544332 2333666 999999998765 533 2445555566666
Q ss_pred ccccccccccccCC-CccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhccHHHHH
Q 035779 265 QGWEKRIDNFTLGE-GVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQR 343 (659)
Q Consensus 265 Q~~~~~ld~~~~~~-GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~ 343 (659)
|.... -.+|+... ..-|+.+ .|... ...+..+|.|---+.++.......+...-.....+++
T Consensus 342 Q~~~~-~gdw~~~~~~~~~GGW---------------~fs~~-~~~~pd~d~Ta~~l~AL~~~~~~~~~~~~~~~~~i~~ 404 (634)
T cd02892 342 QILDN-PGDWKVKYRHLRKGGW---------------AFSTA-NQGYPDSDDTAEALKALLRLQELPPFGEKVSRERLYD 404 (634)
T ss_pred HcCCC-CCchhhhCCCCCCCCC---------------CCCCC-CCCCCCcCchHHHHHHHHHhhccCCcchhhHHHHHHH
Confidence 64111 01111000 0001111 11110 1122347888777777766544332111123467999
Q ss_pred HHHHHHHhccC-CCCCcC
Q 035779 344 GMKLILNLCLS-DGFDTF 360 (659)
Q Consensus 344 aL~~Il~~~~~-dGf~~~ 360 (659)
|++||++.-.. +||..|
T Consensus 405 Av~wLl~~Qn~dGgf~~y 422 (634)
T cd02892 405 AVDWLLGMQNSNGGFAAF 422 (634)
T ss_pred HHHHHHhccCCCCCEeee
Confidence 99999985433 356544
No 33
>PLN02993 lupeol synthase
Probab=55.45 E-value=4.8e+02 Score=32.13 Aligned_cols=91 Identities=19% Similarity=0.255 Sum_probs=50.6
Q ss_pred CCCCceEeecC--CCCCCCccccc-CCcchhhHHHHHHHHHHcCChH----HHHHHHHHH-HHHhcCCCCCc-cccCCCC
Q 035779 536 DGHEWRIVTGY--DPKNTRWSYHN-GGSWPVLLWLLTAASIKTGRPQ----IAKRAIELA-EQRLSKDGWPE-YYDGKTG 606 (659)
Q Consensus 536 ~d~~wr~~t~g--dp~~rP~SYHN-GgVWP~llg~~~~Al~k~G~~~----~A~~ll~~~-~~~l~~~~~pE-~fDG~~g 606 (659)
.|.+|+.-+.+ ++.+.+ |. |..=+.-.++-+.||+..|..+ ..++.+.-+ ..+..++.|+| .|.|...
T Consensus 654 ~DGGWGEs~~S~~~~~y~~---~~~~~St~~qTAwAllaL~~aG~~~~~~~~l~Rgi~~L~~~Q~~~G~W~q~~~~G~F~ 730 (763)
T PLN02993 654 DDGGWGESYLSCPEQRYIP---LEGNRSNLVQTAWAMMGLIHAGQAERDLIPLHRAAKLIITSQLENGDFPQQEILGAFM 730 (763)
T ss_pred CCCCcCcCcCcCCCccccc---CCCCCCchhhHHHHHHHHHHcCCCCCCcHHHHHHHHHHHhccCCCCCCCCcceeceEC
Confidence 47888886632 222222 11 3355667788888899888643 233333333 23455677875 5555321
Q ss_pred -----CCCCCCCCccchHHHHHHHHHHHH
Q 035779 607 -----RYVGKQARKYQTWSIAGYLVAKMM 630 (659)
Q Consensus 607 -----~p~G~~ac~~QAWSaA~~L~a~~l 630 (659)
++.+++ +++=-|+.|.|..+..+
T Consensus 731 ~~~~i~Y~~Yr-~~FPl~ALg~Y~~~~~~ 758 (763)
T PLN02993 731 NTCMLHYATYR-NTFPLWALAEYRKAAFI 758 (763)
T ss_pred ccceeccCccc-hHHHHHHHHHHHHhhhh
Confidence 222332 56677888888755433
No 34
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=49.68 E-value=4.1e+02 Score=32.22 Aligned_cols=47 Identities=26% Similarity=0.258 Sum_probs=31.4
Q ss_pred CcchhhHHHHHHHHHHcCC-------hHHHHHHHHHHHHHhcCCCC-CccccCCC
Q 035779 559 GSWPVLLWLLTAASIKTGR-------PQIAKRAIELAEQRLSKDGW-PEYYDGKT 605 (659)
Q Consensus 559 gVWP~llg~~~~Al~k~G~-------~~~A~~ll~~~~~~l~~~~~-pE~fDG~~ 605 (659)
.|-...||+.+.|+++.|+ .+.|++...-+.+.+..+++ -.+++|..
T Consensus 407 kvlt~wNglmi~aLa~a~~~~~d~~~l~~A~~~~~fi~~~l~~~rl~~~~~~G~a 461 (667)
T COG1331 407 KVLTDWNGLMIAALAEAGRVLGDPEYLEAAERAADFILDNLYVDRLLRRYRGGEA 461 (667)
T ss_pred ceeeccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhcccchheeeecCcc
Confidence 3444568999999999754 35677777666666666666 36666654
No 35
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=47.34 E-value=2.8e+02 Score=33.17 Aligned_cols=139 Identities=16% Similarity=0.085 Sum_probs=75.0
Q ss_pred CcchHHHHHHHHHHhhhccccC--------ccceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCC------HHHH
Q 035779 189 TGAAMMEEALERLKKSYVYFKG--------KPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAE------PEIV 254 (659)
Q Consensus 189 ~~~~~~~~a~~~l~~s~v~~~~--------~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~------peia 254 (659)
+.++.+.+|.+-|++.-|.-.| .+.|-++=.+ ...+|..++ ||..++.+++.. +. -+.+
T Consensus 333 ~~~p~l~kA~~~L~~~Qi~~~~~w~~~~~~~~~GGW~f~~---~~~~~pd~d--dTa~~L~AL~~~--~~~~~~~~~~~i 405 (635)
T TIGR01507 333 ADHDALVKAGEWLLDKQITVPGDWAVKRPNLEPGGWAFQF---DNVYYPDVD--DTAVVVWALNGL--RLPDERRRRDAM 405 (635)
T ss_pred CCCHHHHHHHHHHHhhcccCCCCccccCCCCCCCccCCCC---CCCCCCCch--hHHHHHHHHHHc--CCCccccchHHH
Confidence 3478999999988887654222 1222222110 123566666 888888887664 31 1466
Q ss_pred HHHHHHHHhhccccccccccccCCCccCCcceeccccccccc-ccccCCCCC-CCCCcCCCCcHHHHHHHHHHHHHHcCC
Q 035779 255 KNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKE-TLVADFGGS-AIGRVAPVDSGFWWIILLRSYTKCTRD 332 (659)
Q Consensus 255 r~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e-~~~~dfG~~-aiG~v~sVDatLWfIill~~Y~~~TGD 332 (659)
+..+..++.+|.. +|-.+. |. ...+.. .....|+.. ++-...++|.|.--+.++..+ |+
T Consensus 406 ~ra~~wLl~~Qn~----------dGgw~a-f~----~~~~~~~l~~~~f~d~~~~~D~~~~d~Ta~~l~al~~~----g~ 466 (635)
T TIGR01507 406 TKAFRWIAGMQSS----------NGGWGA-FD----VDNTSDLLNHIPFCDFGAVTDPPTADVTARVLECLGSF----GY 466 (635)
T ss_pred HHHHHHHHHhcCC----------CCCEec-cc----CCcchhHHhcCCccccccccCCCCccHHHHHHHHHHHh----CC
Confidence 6777788888875 343332 10 000000 001123321 111234578887766666653 22
Q ss_pred hhhhccHHHHHHHHHHHHhccCC
Q 035779 333 YALAELPEVQRGMKLILNLCLSD 355 (659)
Q Consensus 333 ~sfl~~p~vq~aL~~Il~~~~~d 355 (659)
.. ..+.+++|++||.+.-..|
T Consensus 467 ~~--~~~~i~rav~~L~~~Q~~d 487 (635)
T TIGR01507 467 DD--AWPVIERAVEYLKREQEPD 487 (635)
T ss_pred Cc--hhHHHHHHHHHHHHccCCC
Confidence 11 1578999999999854443
No 36
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=46.70 E-value=46 Score=37.08 Aligned_cols=155 Identities=14% Similarity=0.095 Sum_probs=69.9
Q ss_pred CCCCCCchhhh-HHHHHHHHhcCCCCHHHHHHHHHHHHh-h-ccccccccccccCCC-ccCCcceeccccccccc-cccc
Q 035779 226 LNYNQVFVRDF-VPTALACLMIEPAEPEIVKNFLLKTLH-L-QGWEKRIDNFTLGEG-VMPASFKVLFNSHQQKE-TLVA 300 (659)
Q Consensus 226 ~nY~~vfGRDt-~IS~lglLl~~~g~peiar~~L~~~a~-l-Q~~~~~ld~~~~~~G-liP~~fki~h~p~~~~e-~~~~ 300 (659)
..|.+-.==|+ +...|.+++ -.||+||+.|..=.+ | |.+++ -..+ --+| +.|-.- + ..|.| +...
T Consensus 28 e~Y~Gh~FWDtE~~~~P~~~~---~~Pe~Ar~lL~YR~~~L~~Ar~~-A~~~-g~~GA~yPWeS-~----~~G~E~t~~~ 97 (370)
T PF03632_consen 28 EGYKGHVFWDTEIFMLPFFLL---THPEAARSLLNYRYRTLPQAREN-AREY-GYKGAMYPWES-A----RTGEECTGPW 97 (370)
T ss_dssp STTTTSB-THHHHCHHHHHHH---S-HHHHHHHHHHHHTTHHHHHHH-HHCT-T--S----SSB-S----S-SSB----H
T ss_pred CCcCCeeeecchHHhcchHhh---cCHHHHHHHHHHHHHHHHHHHHH-HHHc-CCCcceeeccc-c----cCccccCCCC
Confidence 35664433476 556777877 599999999864221 1 11110 0000 0123 444421 0 01211 1101
Q ss_pred CCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhcc---HHHHHHHHHHHHhc--cC--CCCCcCCcccccCCC-Ccc
Q 035779 301 DFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAEL---PEVQRGMKLILNLC--LS--DGFDTFPTLLCADGC-SMI 372 (659)
Q Consensus 301 dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~---p~vq~aL~~Il~~~--~~--dGf~~~p~Ll~~Dg~-~~m 372 (659)
.++ ....=-+.-...++++|+..|||.+|+++ |-+...-++..... .. +.|. ...+.-+|-- ..+
T Consensus 98 ~~~------~~e~Hi~adIa~a~~~Y~~~TgD~~~l~~~g~eil~etArfw~sr~~~~~~~g~y~-i~~V~GPDEY~~~V 170 (370)
T PF03632_consen 98 PAG------DYEIHINADIAYAIWQYYQATGDEEFLREYGAEILFETARFWASRVEYNEDTGRYE-IRNVTGPDEYHENV 170 (370)
T ss_dssp HHH------TT-THHHHHHHHHHHHHHHHH---TTTTTHHHHHHHHHHHHHHHH-EEETTTTEEE---SB--SSTTS-SB
T ss_pred Cch------HhhhcchHHHHHHHHHHHHhCCcHHHHHccCHHHHHHHHHHHHHheEEcCCCCeEE-ecccCchhcccCCC
Confidence 111 01123344567889999999999999984 44444444433322 11 1122 1111111100 000
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHHhcccCC
Q 035779 373 DRRMGIYGYPIEIQSLFYFALRCARQMLKPER 404 (659)
Q Consensus 373 D~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~ 404 (659)
| =...+|++.-..|+.+.++++.++
T Consensus 171 ~-------NnayTN~ma~~~L~~A~~~~~~~~ 195 (370)
T PF03632_consen 171 D-------NNAYTNAMAKWNLRLAAEAAERLG 195 (370)
T ss_dssp S---------HHHHHHHHHHHHHHHHHHTTS-
T ss_pred C-------CcHHHHHHHHHHHHHHHHHHHHCc
Confidence 0 236889999999999999999883
No 37
>PLN03012 Camelliol C synthase
Probab=35.23 E-value=9.5e+02 Score=29.68 Aligned_cols=87 Identities=20% Similarity=0.218 Sum_probs=51.1
Q ss_pred CCCCceEeecCCCCCCCccccc---CCcchhhHHHHHHHHHHcCChH----HHHHHHHHHH-HHhcCCCCCc-cccCCCC
Q 035779 536 DGHEWRIVTGYDPKNTRWSYHN---GGSWPVLLWLLTAASIKTGRPQ----IAKRAIELAE-QRLSKDGWPE-YYDGKTG 606 (659)
Q Consensus 536 ~d~~wr~~t~gdp~~rP~SYHN---GgVWP~llg~~~~Al~k~G~~~----~A~~ll~~~~-~~l~~~~~pE-~fDG~~g 606 (659)
.|.+|+.-+.+- ....|.+ |..=+.-.++.+.||+..|..+ ..+|.++-+. .+..+++|+| .+.|...
T Consensus 654 ~DGGWGEs~~Sc---~~~~y~~~~~~~S~~~qTaWAl~aLi~ag~~~~~~~~i~Rg~~~Ll~~Q~~dG~W~q~~~~G~F~ 730 (759)
T PLN03012 654 DNGGWGESYLSC---PKKIYIAQEGEISNLVQTAWALMGLIHAGQAERDPIPLHRAAKLIINSQLENGDFPQQEATGAFL 730 (759)
T ss_pred CCCCcCCCCCCC---CCccccCCCCCCCcHHHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHcccCCCCCCCceeeeeec
Confidence 478999877431 1122333 3367778899999999998643 3344444333 4556677864 5555321
Q ss_pred -----CCCCCCCCccchHHHHHHHH
Q 035779 607 -----RYVGKQARKYQTWSIAGYLV 626 (659)
Q Consensus 607 -----~p~G~~ac~~QAWSaA~~L~ 626 (659)
.+..++ +++=-|+.|.|..
T Consensus 731 ~~~~i~Y~~Yr-~~FPl~ALg~Y~~ 754 (759)
T PLN03012 731 KNCLLHYAAYR-NIFPLWALAEYRA 754 (759)
T ss_pred cceEEecCccc-hHHHHHHHHHHHH
Confidence 122232 4566677777754
No 38
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=33.28 E-value=6.3e+02 Score=27.04 Aligned_cols=93 Identities=11% Similarity=-0.014 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccCC--C-CCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHH
Q 035779 318 WWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSD--G-FDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALR 394 (659)
Q Consensus 318 WfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~d--G-f~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr 394 (659)
..++++.+ ++.|||...++ .+.++++.|.+...++ | +.... .+++... .....+....+|+.
T Consensus 85 f~l~ala~-~~~tg~~~~~~--~A~~~~~~l~~~~~d~~~g~~~~~~---~~~~~~~---------r~~n~~mhl~eA~l 149 (346)
T PF07221_consen 85 FALLALAE-ARATGDPEALE--LAEQTLEFLERRFWDPEGGGYRESF---DPDWSPP---------RGQNPHMHLLEAFL 149 (346)
T ss_dssp HHHHHHHH-HHCTT-TTHHH--HHHHHHHHHHHHTEETTTTEE--EE---TTTSSCB---------EEHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHhCChhHHH--HHHHHHHHHHHHhcccccCcceecc---CCccccC---------CCCChhHHHHHHHH
Confidence 55777777 68899997765 3778999998875322 2 22111 1111110 11344445555554
Q ss_pred HHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhcccccc
Q 035779 395 CARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFT 433 (659)
Q Consensus 395 ~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~ 433 (659)
.+.++.. -.++.+++..|.+.|..+|+....
T Consensus 150 ~l~~~~~--------~~~~~~~a~~l~~~~~~~f~~~~~ 180 (346)
T PF07221_consen 150 ALYEATG--------DPRYLDRAEELLDLFLDRFADPES 180 (346)
T ss_dssp HHHHHHH--------HHHHHHHHHHHHHHHHTTCHHCCT
T ss_pred HHHHhcc--------CHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4444322 234667788888888888875433
No 39
>PF12854 PPR_1: PPR repeat
Probab=31.61 E-value=55 Score=23.62 Aligned_cols=23 Identities=22% Similarity=0.085 Sum_probs=19.9
Q ss_pred HHHHHHHHHcCChHHHHHHHHHH
Q 035779 566 WLLTAASIKTGRPQIAKRAIELA 588 (659)
Q Consensus 566 g~~~~Al~k~G~~~~A~~ll~~~ 588 (659)
..++.+++|.|+.++|.++++.+
T Consensus 11 ~~lI~~~Ck~G~~~~A~~l~~~M 33 (34)
T PF12854_consen 11 NTLIDGYCKAGRVDEAFELFDEM 33 (34)
T ss_pred HHHHHHHHHCCCHHHHHHHHHhC
Confidence 46889999999999999988753
No 40
>KOG4125 consensus Acid trehalase [Carbohydrate transport and metabolism]
Probab=31.14 E-value=2.8e+02 Score=32.20 Aligned_cols=80 Identities=8% Similarity=0.044 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHcCChhhhc---cHHHHHHHHHHHHhcc-CCCCCcCCcccccCCCCcccccC--CCCCCchhhHHHHHHH
Q 035779 319 WIILLRSYTKCTRDYALAE---LPEVQRGMKLILNLCL-SDGFDTFPTLLCADGCSMIDRRM--GIYGYPIEIQSLFYFA 392 (659)
Q Consensus 319 fIill~~Y~~~TGD~sfl~---~p~vq~aL~~Il~~~~-~dGf~~~p~Ll~~Dg~~~mD~~m--~r~G~PVEIQALwY~A 392 (659)
..+++..|+..|.|.++.+ ||-+...-++...... ++....+..+ ..|+..- +-.--.|+.||+--++
T Consensus 373 v~~Af~~y~h~~~D~e~~~~t~Wpi~~~VA~F~~SRv~~~~s~~~yHL~------nVM~PDE~H~~VNn~VYTNa~~k~~ 446 (682)
T KOG4125|consen 373 VAMAFSIYLHEGIDDEYLRYTTWPIIKNVAQFFTSRVKYNSSLGLYHLY------NVMDPDEFHNHVNNGVYTNAGIKTL 446 (682)
T ss_pred HHHHHHHHHHhccchhhhccCCchhHHHHHHHhhheeEecCccceeeee------ccCCchhcccccccchhhhHHHHHH
Confidence 4678999999999999887 7877777777655321 1111111110 1222110 1111358999999999
Q ss_pred HHHHHHhcccCC
Q 035779 393 LRCARQMLKPER 404 (659)
Q Consensus 393 Lr~aaeLa~~~~ 404 (659)
|++|+.||..+|
T Consensus 447 L~FA~~LA~hlG 458 (682)
T KOG4125|consen 447 LKFATDLANHLG 458 (682)
T ss_pred HHHHHHHHHhhC
Confidence 999999999985
No 41
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=30.63 E-value=5.8e+02 Score=30.62 Aligned_cols=135 Identities=13% Similarity=0.036 Sum_probs=72.5
Q ss_pred CcchHHHHHHHHHHhhhccccCccceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCC---CHHHHHHHHHHHHhhc
Q 035779 189 TGAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPA---EPEIVKNFLLKTLHLQ 265 (659)
Q Consensus 189 ~~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g---~peiar~~L~~~a~lQ 265 (659)
..++.++.+++.+++-++.-.| | .... ..=.++| ||..+..+++.. | +...++..+..+.+.|
T Consensus 284 ~~~~~~~~~l~~l~~~~~~~~~---g-~~~~------~~~s~vW--DTa~ai~AL~~a--g~~~~~p~l~kA~~~L~~~Q 349 (635)
T TIGR01507 284 QHDAFIKLGWEGIDLYGVELDD---S-WMFQ------ACVSPVW--DTALAVLALREA--GLPADHDALVKAGEWLLDKQ 349 (635)
T ss_pred CCCHHHHHHHHHHHHheEecCC---c-eEec------CCCCcHH--HHHHHHHHHHHc--CCCCCCHHHHHHHHHHHhhc
Confidence 5678899999999887755322 2 2211 1112566 999998888765 5 2224444555555555
Q ss_pred cccccccccccC-CCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhccHHHHHH
Q 035779 266 GWEKRIDNFTLG-EGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRG 344 (659)
Q Consensus 266 ~~~~~ld~~~~~-~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~a 344 (659)
-... ++|+.. ...-|+ -=.|+.. ...+..+|.|..-+.+|..- .+.+.. ...+.+++|
T Consensus 350 i~~~--~~w~~~~~~~~~G---------------GW~f~~~-~~~~pd~ddTa~~L~AL~~~--~~~~~~-~~~~~i~ra 408 (635)
T TIGR01507 350 ITVP--GDWAVKRPNLEPG---------------GWAFQFD-NVYYPDVDDTAVVVWALNGL--RLPDER-RRRDAMTKA 408 (635)
T ss_pred ccCC--CCccccCCCCCCC---------------ccCCCCC-CCCCCCchhHHHHHHHHHHc--CCCccc-cchHHHHHH
Confidence 4321 111100 000011 1112210 12245789999988888763 122222 223689999
Q ss_pred HHHHHHhcc-CCCCC
Q 035779 345 MKLILNLCL-SDGFD 358 (659)
Q Consensus 345 L~~Il~~~~-~dGf~ 358 (659)
++|++..-. ++|+.
T Consensus 409 ~~wLl~~Qn~dGgw~ 423 (635)
T TIGR01507 409 FRWIAGMQSSNGGWG 423 (635)
T ss_pred HHHHHHhcCCCCCEe
Confidence 999998543 34554
No 42
>PF07721 TPR_4: Tetratricopeptide repeat; InterPro: IPR011717 This entry includes tetratricopeptide-like repeats not detected by the IPR001440 from INTERPRO, IPR013105 from INTERPRO and IPR011716 from INTERPRO models. The tetratricopeptide repeat (TPR) motif is a protein-protein interaction module found in multiple copies in a number of functionally different proteins that facilitates specific interactions with a partner protein(s) [].; GO: 0042802 identical protein binding
Probab=26.09 E-value=1.1e+02 Score=20.71 Aligned_cols=25 Identities=28% Similarity=0.393 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHHcCChHHHHHHHH
Q 035779 562 PVLLWLLTAASIKTGRPQIAKRAIE 586 (659)
Q Consensus 562 P~llg~~~~Al~k~G~~~~A~~ll~ 586 (659)
|+.....+.++.+.|+.++|.+.++
T Consensus 1 ~~a~~~la~~~~~~G~~~eA~~~l~ 25 (26)
T PF07721_consen 1 PRARLALARALLAQGDPDEAERLLR 25 (26)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 5667778889999999999988775
No 43
>COG4848 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.78 E-value=49 Score=34.30 Aligned_cols=37 Identities=30% Similarity=0.364 Sum_probs=29.3
Q ss_pred CCcccchhhHhhhccChHHHHHHhhhhcCCCCCcccc
Q 035779 28 GYSAVDEDMVEQENMSHKEFMSAASSLAGKNSSSVDE 64 (659)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (659)
.|.-+||.|.|.|+|||+|.-.+|---.+|-|.++.+
T Consensus 126 sYrlide~mLeke~ls~eeiRe~a~fNlrkL~~~~k~ 162 (265)
T COG4848 126 SYRLIDEQMLEKEELSAEEIREMALFNLRKLSEPLKA 162 (265)
T ss_pred hhhhhhHHHhhhccccHHHHHHHHHhhhhhcCccccc
Confidence 4677899999999999999988887666666655543
No 44
>PF06051 DUF928: Domain of Unknown Function (DUF928); InterPro: IPR010328 This is a family of uncharacterised bacterial proteins.
Probab=24.06 E-value=76 Score=32.01 Aligned_cols=32 Identities=13% Similarity=0.308 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHH
Q 035779 386 QSLFYFALRCARQMLKPERDGKELIERIDKRI 417 (659)
Q Consensus 386 QALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra 417 (659)
|++||.||..++++......+......|.+-+
T Consensus 144 ~GiWyDaL~~La~lr~~~p~d~~l~~~W~~LL 175 (189)
T PF06051_consen 144 NGIWYDALATLAELRRSQPNDPQLAQDWQELL 175 (189)
T ss_pred hCchHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 89999999999999886545555555544443
No 45
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=22.16 E-value=9.8e+02 Score=25.56 Aligned_cols=240 Identities=16% Similarity=0.137 Sum_probs=0.0
Q ss_pred CCCCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccC--CCCCcCCcccccCCCCcccccCCCCCCchhhHHH
Q 035779 311 APVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLS--DGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSL 388 (659)
Q Consensus 311 ~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~--dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQAL 388 (659)
..+|...-...++..| +.|||..+.+. +.++++++++.... +|-..... ......|+|.
T Consensus 65 ~~~d~~~~g~~~~~~y-~~t~d~~y~~~--~~~~a~~~l~~~~~~~~G~~~~~~--~~~~~~wiD~-------------- 125 (336)
T PF07470_consen 65 YNLDDHDIGFLLLDLY-ERTGDEKYKDA--AIQAADWLLARRPRTSDGGFWHNR--PYPNQVWIDG-------------- 125 (336)
T ss_dssp TSCCGTTHHHHHHHHH-HHH-THHHHHH--HHHHHHHHHHTSCBECTGCBECTT--TSTTEEETTH--------------
T ss_pred cCCchhhhHHHHHHHH-HHhCCHHHHHH--HHHHHHHHHHhCCCCCCCccccCC--CCCCceeecc--------------
Q ss_pred HHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCcccccc
Q 035779 389 FYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDF 468 (659)
Q Consensus 389 wY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w 468 (659)
.|+++-.++.+++.. +++...+.+.+.+....+++ |
T Consensus 126 ~~M~~p~l~~~~~~t-gd~~~~~~a~~q~~~~~~~~-------------------------------------------~ 161 (336)
T PF07470_consen 126 MYMNLPFLAWAGKLT-GDPKYLDEAVRQFRLTRKYL-------------------------------------------Y 161 (336)
T ss_dssp HHHHHHHHHHHHHHH-TGHHHHHHHHHHHHHHHHHH-------------------------------------------B
T ss_pred ccccHHHHHHHHHHH-CCcHHHHHHHHHHHHHHHhc-------------------------------------------c
Q ss_pred ccCCCceEEeeecCCcccccc--cccchhHHHhcCC-------CCHHHHHHHHHHHHHHHHhhhc--CCCcccccCCCCC
Q 035779 469 MPLRGGYLIGNVSPARMDFRW--FLVGNCIAILSSL-------ATPAQATAIMDLIEERWEDLIG--EMPLKISYPALDG 537 (659)
Q Consensus 469 ~~~~GGYl~g~v~P~~~d~Ri--falGN~LALlsgl-------l~~eqa~~Vl~~V~~~~~~Llt--p~GLr~l~Pa~~d 537 (659)
-++.|-|+-+.-..+..+..- .++||.|++..=+ -+.+....+++.+.+.-..|.. + .-..-+..+.+
T Consensus 162 d~~tGl~~h~~~~~~~~~~s~~~WsRG~gW~~~Gl~~~l~~lp~~~~~~~~~~~~~~~~~~~l~~~q~-~~G~w~~~~~~ 240 (336)
T PF07470_consen 162 DPETGLYYHGYTYQGYADWSDSFWSRGNGWAIYGLAEVLEYLPEDHPERDELLEIAKKLADALARYQD-EDGLWYQDLDD 240 (336)
T ss_dssp -TTTSSBESEEETTSSSTTST--BHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTST-TTSBEBSBTTT
T ss_pred CCCCCceeeccCCCCCcCcccccCcchhhHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHhcCC-CCCCcceecCC
Q ss_pred CC---ceEeecCCCCCCCcccccCCcchhhHHHHHHHHHH---------cCChHHHHHHHHHHHHH-hcCCCCCccccCC
Q 035779 538 HE---WRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIK---------TGRPQIAKRAIELAEQR-LSKDGWPEYYDGK 604 (659)
Q Consensus 538 ~~---wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k---------~G~~~~A~~ll~~~~~~-l~~~~~pE~fDG~ 604 (659)
++ +.-.+ -.++++.|+++ ....+.|.+.+..+.+. +..++..-+..+-
T Consensus 241 ~~~~~~~etS-------------------atA~~a~~l~~gi~~g~~d~~~y~~~a~~a~~~l~~~~~~~dG~~~~~~~~ 301 (336)
T PF07470_consen 241 PDPGNYRETS-------------------ATAMFAYGLLRGIRLGLLDPEEYRPAAEKALEALLSNAIDPDGKLGLKGVC 301 (336)
T ss_dssp TTTTS-BEHH-------------------HHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHCEB-TTSSSBBTCEB
T ss_pred CCCCCcccHH-------------------HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhCccCCCCCeEEeeeE
Q ss_pred CCCC----CCCCCCccchHHHHHHHHHHHHhcC
Q 035779 605 TGRY----VGKQARKYQTWSIAGYLVAKMMVEN 633 (659)
Q Consensus 605 ~g~p----~G~~ac~~QAWSaA~~L~a~~lL~~ 633 (659)
.+.+ .+...+....|..+.||.+...+.+
T Consensus 302 ~~~~~~~Y~~~~~~~~~~~G~g~fl~A~~e~~r 334 (336)
T PF07470_consen 302 GGTPVGGYQGRDYNVNDPYGDGYFLLALAEYER 334 (336)
T ss_dssp ETTTS-SHHTEEEECCSHHHHHHHHHHHHHHHC
T ss_pred eecCCCCCCCCCCCCCcCcHHHHHHHHHHHHHH
No 46
>PF13249 Prenyltrans_2: Prenyltransferase-like; PDB: 1O6R_B 1O6Q_B 1H35_C 1H3A_C 1SQC_A 1UMP_A 1O6H_C 1O79_B 1GSZ_C 1H37_C ....
Probab=21.48 E-value=2e+02 Score=25.05 Aligned_cols=31 Identities=19% Similarity=-0.022 Sum_probs=20.2
Q ss_pred hhhHHHHHHHHhcCCCCHHHHHHH--HHHHHhhcc
Q 035779 234 RDFVPTALACLMIEPAEPEIVKNF--LLKTLHLQG 266 (659)
Q Consensus 234 RDt~IS~lglLl~~~g~peiar~~--L~~~a~lQ~ 266 (659)
-+|..++..|... +.....+.+ +..+.+.|.
T Consensus 24 ~~T~~al~aL~~~--g~~~~~~~~~~~~~L~~~q~ 56 (113)
T PF13249_consen 24 WDTAFALLALAAL--GEEPDRDRAAAVEWLLSQQN 56 (113)
T ss_dssp HHHHHHHHHHHHH--TSHHCHHHHHHHHHHHHHB-
T ss_pred HHHHHHHHHHHHh--CCcccHHHHHHHHHHHHhCC
Confidence 3777777777775 666656666 666666654
No 47
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=21.41 E-value=2.1e+02 Score=21.34 Aligned_cols=31 Identities=26% Similarity=0.245 Sum_probs=25.0
Q ss_pred hhhHHHHHHHHHHcCChHHHHHHHHHHHHHh
Q 035779 562 PVLLWLLTAASIKTGRPQIAKRAIELAEQRL 592 (659)
Q Consensus 562 P~llg~~~~Al~k~G~~~~A~~ll~~~~~~l 592 (659)
|...-.++.++.+.|+.+.|.+.++.+.+..
T Consensus 1 p~~~~~la~~~~~~G~~~~A~~~~~~~l~~~ 31 (44)
T PF13428_consen 1 PAAWLALARAYRRLGQPDEAERLLRRALALD 31 (44)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 4455677888999999999999999876654
No 48
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=20.97 E-value=4.8e+02 Score=27.98 Aligned_cols=93 Identities=11% Similarity=0.117 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHh
Q 035779 320 IILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQM 399 (659)
Q Consensus 320 Iill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeL 399 (659)
|++...-++ +|+.+.++ .++++++++.+.+.+.-..++-..+..++ .+|.. +.++-|++...|+.. +
T Consensus 27 ~~~fa~a~~-~g~~~~l~--~A~~~~~fl~~~~~D~~~Gg~~~~~~~~~--~~~~~-----~~~Y~~af~l~ala~-~-- 93 (346)
T PF07221_consen 27 LYTFARAYR-LGRPEYLE--LAEHGFDFLRKHFRDPEYGGWYRSLDDGG--PLDPQ-----KDLYDQAFALLALAE-A-- 93 (346)
T ss_dssp HHHHHHHHH-TTSHHHHH--HHHHHHHHHHHTTBTTTTSSBSSEEETTE--EEE-------EEHHHHHHHHHHHHH-H--
T ss_pred HHHHHHHHh-cCchhHHH--HHHHHHHHHHHhcccCCCCCEEEEeCCCC--CCccc-----cchHHHHHHHHHHHH-H--
Confidence 444444445 78888665 48899999998773211111211121111 23311 346778866555554 2
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHHhcccc
Q 035779 400 LKPERDGKELIERIDKRITALSYHIQKYYWLD 431 (659)
Q Consensus 400 a~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d 431 (659)
... ++.+. .+.++++-+.|.++||.+
T Consensus 94 -~~t-g~~~~----~~~A~~~~~~l~~~~~d~ 119 (346)
T PF07221_consen 94 -RAT-GDPEA----LELAEQTLEFLERRFWDP 119 (346)
T ss_dssp -HCT-T-TTH----HHHHHHHHHHHHHHTEET
T ss_pred -HHh-CChhH----HHHHHHHHHHHHHHhccc
Confidence 223 33322 333555667788888864
No 49
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=20.87 E-value=6e+02 Score=28.06 Aligned_cols=102 Identities=14% Similarity=0.010 Sum_probs=54.1
Q ss_pred cHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHH-h-ccCC-CCCcCCcccccCCCC-cccccCCCCCCchhhHHHHH
Q 035779 315 SGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILN-L-CLSD-GFDTFPTLLCADGCS-MIDRRMGIYGYPIEIQSLFY 390 (659)
Q Consensus 315 atLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~-~-~~~d-Gf~~~p~Ll~~Dg~~-~mD~~m~r~G~PVEIQALwY 390 (659)
+.--++++..+.++.|||...+++ .+++.+|+.+ . .+.+ |.. +.++ ..++.| -++ ...-.+-||.+.
T Consensus 156 sN~~~~~laarL~~~t~~~~Yl~~--A~~~~~W~~~~~L~d~~~g~v-~Dg~-~~~~~c~~~~-----~~~~TYNqG~~l 226 (370)
T PF03663_consen 156 SNGPAAQLAARLYRITGDQTYLDW--AKKIYDWMRDSGLIDPSTGLV-YDGI-NIDGNCTNIN-----KTKWTYNQGVFL 226 (370)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHHH--HHHHHHHHHH-HHB--TTS-B---EE--TTSSS-B-T-----T---HHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCChHHHHH--HHHHHHHhhcceeEECCCcEE-EeCC-ccCCCCCcCC-----CceechHHHHHH
Confidence 444566666677788999998875 8899999988 2 2222 333 2221 122211 111 123346788877
Q ss_pred HHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccc
Q 035779 391 FALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDF 432 (659)
Q Consensus 391 ~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~ 432 (659)
.|+..+-+.-. + . +.+.+++.+|.....++|+.+.
T Consensus 227 ~a~~~Ly~~T~---~-~---~~yl~~A~~la~~~~~~~~~~~ 261 (370)
T PF03663_consen 227 GAAAYLYNATN---D-E---QTYLDRAEKLADAAINHFFDNG 261 (370)
T ss_dssp HHHHHHHHHH------H----HHHHHHHHHHHHHHHHHEETT
T ss_pred HHHHHHHHhcC---C-c---cHHHHHHHHHHHHHHHHhCCCC
Confidence 66665554421 2 1 1566667777777777776543
No 50
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase. This model identifies 2,3-oxidosqualene cyclases from Stigmatella aurantiaca which produces cycloartenol, and Gemmata obscuriglobus and Methylococcus capsulatus which each produce the closely related sterol, lanosterol.
Probab=20.79 E-value=1.5e+03 Score=27.17 Aligned_cols=142 Identities=13% Similarity=-0.049 Sum_probs=73.6
Q ss_pred CcchHHHHHHHHHHhhhccccCccc-eeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCC-H----HHHHHHHHHHH
Q 035779 189 TGAAMMEEALERLKKSYVYFKGKPV-GTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAE-P----EIVKNFLLKTL 262 (659)
Q Consensus 189 ~~~~~~~~a~~~l~~s~v~~~~~~~-Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~-p----eiar~~L~~~a 262 (659)
.++++++.+++.|++.++.- +. |...-. -+- .+| ||.+++.++.-. |. . +..+..+..+.
T Consensus 273 ~~~p~~~k~l~~l~~~~~~~---~~~g~~~q~------~~s-~~W--DTala~~AL~e~--g~~~~~~~~~l~kA~~wL~ 338 (634)
T TIGR03463 273 PDGPEVAAHLEGLEDYRYED---DDRGLRYNG------YNS-SEW--DTAFAVQALAAT--PETAGRHRRMLERAARFLE 338 (634)
T ss_pred CCCHHHHHHHHHHHhhEEEc---CCCCEEEee------CCC-Cch--hHHHHHHHHHHc--CCCchhhhHHHHHHHHHHH
Confidence 46789999999999976432 23 321110 011 224 899999888765 52 1 33455666666
Q ss_pred hhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCCh--hhhccHH
Q 035779 263 HLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDY--ALAELPE 340 (659)
Q Consensus 263 ~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~--sfl~~p~ 340 (659)
+.|-.+.. .++.. ..|+ .+ .| -=.|... ...+..+|.|-=-+.++... +..|.. +-+..+.
T Consensus 339 ~~Q~~~~~-gd~~~---~~~~------~~-~G----GW~f~~~-~~~~pdsD~Ta~~L~Al~~~-~~~~~~~~~~~~~~~ 401 (634)
T TIGR03463 339 ANQMLEDT-AEPQR---FFRD------PA-KG----GWCFSDG-DHGWPVSDCTAEALSASLVL-EPLGLNPEERVPQAR 401 (634)
T ss_pred HhcCCcCC-CCchh---cCCC------CC-CC----ccccccC-CCCCCccccHHHHHHHHHHH-hhcCCcccccccHHH
Confidence 66653311 01110 0010 00 01 0111110 01234578887666666654 233321 2234578
Q ss_pred HHHHHHHHHHhcc-CCCCCcCC
Q 035779 341 VQRGMKLILNLCL-SDGFDTFP 361 (659)
Q Consensus 341 vq~aL~~Il~~~~-~dGf~~~p 361 (659)
+++|++||+..=. ++||-.|.
T Consensus 402 l~~av~~Ll~~Qn~dGGw~~y~ 423 (634)
T TIGR03463 402 LQDAVEFILSRQNEDGGFGTYE 423 (634)
T ss_pred HHHHHHHHHHhcCCCCCEeccC
Confidence 9999999998643 34666554
Done!