Query 035779
Match_columns 659
No_of_seqs 227 out of 792
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 10:23:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035779.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035779hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rrs_A Cellobiose phosphorylas 100.0 1.8E-35 6E-40 344.8 21.7 339 231-640 363-756 (822)
2 3qde_A Cellobiose phosphorylas 100.0 3.7E-35 1.3E-39 341.7 22.8 338 231-639 356-742 (811)
3 3c68_A Uncharacterized protein 100.0 2.1E-32 7.1E-37 316.7 33.4 374 192-631 282-757 (761)
4 1v7w_A Chitobiose phosphorylas 100.0 1.1E-33 3.7E-38 327.5 22.3 348 230-638 344-732 (807)
5 2z07_A Putative uncharacterize 100.0 1.4E-32 4.8E-37 295.6 28.1 345 192-627 3-418 (420)
6 2jg0_A Periplasmic trehalase; 100.0 2.2E-31 7.6E-36 297.4 26.5 313 226-633 121-504 (535)
7 2okx_A Rhamnosidase B; alpha b 99.9 4.5E-24 1.6E-28 252.4 29.6 311 229-648 573-895 (956)
8 3cih_A Putative alpha-rhamnosi 99.9 4.2E-23 1.4E-27 238.0 27.7 335 185-648 301-655 (739)
9 1lf6_A Glucoamylase; (alpha/al 99.8 6E-20 2.1E-24 210.4 25.1 315 226-631 335-666 (684)
10 1ulv_A Glucodextranase; GH fam 99.8 1E-18 3.4E-23 208.0 28.3 312 227-631 325-667 (1020)
11 2fba_A Glucoamylase Glu1; (alp 99.5 7.9E-12 2.7E-16 138.7 25.2 331 209-631 45-485 (492)
12 1gai_A Glucoamylase-471; hydro 99.4 7.3E-11 2.5E-15 130.4 28.3 334 197-632 14-429 (472)
13 2vn4_A Glucoamylase; hydrolase 99.3 2.8E-10 9.6E-15 129.0 28.8 342 197-632 13-434 (599)
14 2p0v_A Hypothetical protein BT 99.2 5.1E-10 1.7E-14 123.2 20.1 345 206-628 88-465 (489)
15 3qry_B Putative uncharacterize 98.9 2.9E-08 9.9E-13 107.7 18.7 341 205-625 40-416 (426)
16 3p2c_A Putative glycosyl hydro 98.9 1.1E-07 3.6E-12 104.3 21.6 338 210-627 74-446 (463)
17 3qt9_A Putative uncharacterize 98.9 6.9E-08 2.4E-12 104.8 18.9 341 206-625 44-416 (427)
18 2eab_A Alpha-fucosidase; glyco 93.5 0.47 1.6E-05 56.3 13.1 83 315-404 507-598 (899)
19 2rdy_A BH0842 protein; PSI-II, 89.8 0.73 2.5E-05 54.0 9.0 101 316-418 450-558 (803)
20 2gz6_A N-acetyl-D-glucosamine 89.8 6.8 0.00023 40.7 15.6 97 314-430 54-153 (388)
21 1h54_A Maltose phosphorylase; 87.4 3.8 0.00013 47.6 12.8 80 316-401 429-514 (754)
22 2ahf_A Unsaturated glucuronyl 72.6 1E+02 0.0035 32.7 17.3 124 207-352 123-257 (377)
23 2gz6_A N-acetyl-D-glucosamine 59.7 97 0.0033 31.8 13.1 97 313-431 114-211 (388)
24 2zzr_A Unsaturated glucuronyl 49.4 2.7E+02 0.0093 29.8 17.3 34 317-352 249-282 (397)
25 1w6k_A Lanosterol synthase; cy 47.7 3.8E+02 0.013 30.9 16.8 175 190-400 354-548 (732)
26 3k7x_A LIN0763 protein; Q92DQ0 35.9 2E+02 0.0069 29.9 10.9 99 315-429 151-250 (349)
27 3pmm_A Putative cytoplasmic pr 35.2 4.2E+02 0.014 27.8 19.7 81 321-418 117-200 (382)
28 2sqc_A Squalene-hopene cyclase 33.2 3.5E+02 0.012 30.3 13.1 137 190-355 329-482 (631)
29 3k11_A Putative glycosyl hydro 30.0 3.5E+02 0.012 29.4 11.9 84 313-416 144-232 (445)
30 2jg0_A Periplasmic trehalase; 29.8 1.3E+02 0.0045 33.3 8.7 76 513-596 87-162 (535)
31 3k7x_A LIN0763 protein; Q92DQ0 29.1 5E+02 0.017 26.9 14.1 80 320-431 52-131 (349)
32 3gt5_A N-acetylglucosamine 2-e 28.7 2E+02 0.0068 30.1 9.5 93 318-431 56-151 (402)
33 1fp3_A N-acyl-D-glucosamine 2- 27.8 3.8E+02 0.013 27.6 11.4 101 312-431 50-161 (402)
34 2ahf_A Unsaturated glucuronyl 26.2 2.5E+02 0.0086 29.7 9.7 39 312-352 86-124 (377)
35 2zzr_A Unsaturated glucuronyl 24.3 6.7E+02 0.023 26.7 16.7 51 552-603 235-292 (397)
No 1
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=100.00 E-value=1.8e-35 Score=344.80 Aligned_cols=339 Identities=17% Similarity=0.175 Sum_probs=253.6
Q ss_pred Cch-hhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCC
Q 035779 231 VFV-RDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGR 309 (659)
Q Consensus 231 vfG-RDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~ 309 (659)
-|| ||.+.-+++++. ..||.||+.|+.++..|. .+|.+|+.|. |..+. |...++
T Consensus 363 ~~G~RD~~qd~~~~~~---~~pe~ar~~il~~~~~Q~----------~dG~v~h~~~----p~~~~-------g~~~~~- 417 (822)
T 3rrs_A 363 GMGFRDSNQDLLGFVH---LIPERARERIIDIASTQF----------ADGSAYHQYQ----PLTKR-------GNNDIG- 417 (822)
T ss_dssp CEEHHHHHHHHHHHTT---TCHHHHHHHHHHHHTTCC----------TTSCCCSEEE----TTTTE-------ECTTTC-
T ss_pred CCchHHHHHHHHHHHh---cCHHHHHHHHHHHHHhhc----------ccCcccceec----CcCCC-------CccCCC-
Confidence 466 999999999987 689999999999888764 4799999662 21111 111111
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCChhhhcc---------------HHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccc
Q 035779 310 VAPVDSGFWWIILLRSYTKCTRDYALAEL---------------PEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDR 374 (659)
Q Consensus 310 v~sVDatLWfIill~~Y~~~TGD~sfl~~---------------p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~ 374 (659)
...+|.+||+|+++++|++.|||.+|+++ ++++++++++++....+|+. .+..+||.+.|+.
T Consensus 418 ~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~GLp---~~g~gDWnD~ln~ 494 (822)
T 3rrs_A 418 SGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHRGPHGLP---LIGRADWNDCLNL 494 (822)
T ss_dssp SCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSBCTTSSB---BCBTCSSSTTCCT
T ss_pred CcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcCCCCCCc---ccCCCcchhhccc
Confidence 12489999999999999999999999972 48999999999765444543 3335677766653
Q ss_pred c-----C-----------CCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhh
Q 035779 375 R-----M-----------GIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNI 438 (659)
Q Consensus 375 ~-----m-----------~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~i 438 (659)
. . ++.|.+|++++|||.||+.+++|++.+ |+.+.++++++++++|+++|+++|| |.+++.+.
T Consensus 495 ~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~-G~~~~A~~~~~~A~~lk~a~~~~~W-dg~~y~ra 572 (822)
T 3rrs_A 495 NCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARR-GLADVADRARGHVAEMRDALLTDGW-DGSWFLRA 572 (822)
T ss_dssp TCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHTTTB-CSSSBCCE
T ss_pred ccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhcc-CcceeEEE
Confidence 1 1 267999999999999999999999998 6778899999999999999999999 44554332
Q ss_pred hhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHH-------HHHHH
Q 035779 439 YRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPA-------QATAI 511 (659)
Q Consensus 439 yr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~e-------qa~~V 511 (659)
|+. +| -.+|. ....+.|+++.++.|++++|+++++ |++++
T Consensus 573 ~d~------------------------------dg-~~~gs--~~~~~~~i~~~~q~~avlsGia~~e~~~~~~~~a~~a 619 (822)
T 3rrs_A 573 YDY------------------------------YG-NPIGT--DAHDEGKIWIEPQGFAVMAGVGVGEGPQDTDAPAIKA 619 (822)
T ss_dssp ECT------------------------------TS-CEESC--TTSSSCCEEHHHHHHHHHTTTTCCSSTTCTTSHHHHH
T ss_pred EcC------------------------------CC-CCccc--cCCCCceEEeccchhHhhcCCCCcccccchHHHHHHH
Confidence 221 11 11121 1112346889999999999999999 99999
Q ss_pred HHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHH--
Q 035779 512 MDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAE-- 589 (659)
Q Consensus 512 l~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~-- 589 (659)
|+.|. ++|++|+|+|+++|++... ....+....|.|.+||||++|||.+.+++.|++++|+.++|.+++..+.
T Consensus 620 l~~v~---~~L~t~~Girll~p~f~~~--~~~~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~ 694 (822)
T 3rrs_A 620 LDSVN---EMLATDHGMVLQYPAYTTY--QVHMGEVSTYPPGYKENGGIFCHNNPWVIIAETVVGRGGRAFDYYKRITPA 694 (822)
T ss_dssp HHHHH---HHTEETTEEBSEESCCSSC--CTTSTTGGGSCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHCHH
T ss_pred HHHHH---HHcCCCCeEEEcCCCcccc--cCCCCcccccCCCccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhCcc
Confidence 99996 4899999999999987521 1222455668999999999999999999999999999999999998762
Q ss_pred HH----hcCCCCCccccCCC----CCCCCCCCCccchHHHH---HH--HHHHHHhc-CCChhhhc
Q 035779 590 QR----LSKDGWPEYYDGKT----GRYVGKQARKYQTWSIA---GY--LVAKMMVE-NPSNLLMI 640 (659)
Q Consensus 590 ~~----l~~~~~pE~fDG~~----g~p~G~~ac~~QAWSaA---~~--L~a~~lL~-~P~~~~~~ 640 (659)
.+ ....+.||+|++.. .+..| |..|+|..+ -+ +++..+|| +|+..+|.
T Consensus 695 ~~~~~~~~~~~~Py~~~~~~~~~~~p~~G---~~~~~w~tGsa~w~~~~lve~~LGlr~~~~~L~ 756 (822)
T 3rrs_A 695 YREDISDVHRLEPYVYAQMIAGKEAVRHG---EAKNSWLTGTAAWNFVTVSQYLLGVRPEYDGLV 756 (822)
T ss_dssp HHGGGHHHHCSCSSSCEEEECCTTSTTTT---CEEEESSSTHHHHHHHHHHHTTSCEEECSSEEE
T ss_pred cccchhHhhccCcEEEeccccccCCCCCC---CccchhhhhhHHHHHHHHHHhEEeEEEECCEEE
Confidence 22 12346799988754 23344 557777553 22 35567888 88765443
No 2
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=100.00 E-value=3.7e-35 Score=341.72 Aligned_cols=338 Identities=17% Similarity=0.168 Sum_probs=251.6
Q ss_pred Cch-hhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCC
Q 035779 231 VFV-RDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGR 309 (659)
Q Consensus 231 vfG-RDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~ 309 (659)
-|| ||.+.-+++++. ..||.||+.|+.++..|- .+|.+|+.|. |..+. |...++
T Consensus 356 ~~G~RD~~qd~~~~~~---~~p~~~r~~il~~~~~Q~----------~dG~~~h~~~----p~~~~-------g~~~~~- 410 (811)
T 3qde_A 356 GMGFRDSNQDLLGFVH---QIPERARERLLDLAATQL----------EDGSAYHQYQ----PLTKK-------GNNEIG- 410 (811)
T ss_dssp CEEHHHHHHHHHTTTT---TCHHHHHHHHHHHHTTBC----------TTSCBCSEEC----TTTCC-------EECTTC-
T ss_pred CCccHHHHHHHHHHHh---cCHHHHHHHHHHHHhhcc----------cCCCccceec----CCCCC-------CCCCCC-
Confidence 466 999999999987 589999999999888764 4799999662 21111 111111
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCChhhhcc---------------HHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccc
Q 035779 310 VAPVDSGFWWIILLRSYTKCTRDYALAEL---------------PEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDR 374 (659)
Q Consensus 310 v~sVDatLWfIill~~Y~~~TGD~sfl~~---------------p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~ 374 (659)
...+|++||+|+++++|+++|||.+|+++ ++++++++++++....+|+.- ...+||.+.|+.
T Consensus 411 ~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~~GL~~---~g~~DWnD~ln~ 487 (811)
T 3qde_A 411 SNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNLGPHGLPL---IGRADWNDCLNL 487 (811)
T ss_dssp CCBTTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCBCTTSSBB---CBTCSSSTTCCS
T ss_pred CCcccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcCCCCCCcc---cccCCchhhccc
Confidence 23489999999999999999999999972 589999999987554445542 235677665543
Q ss_pred c-----C-----------CCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhh
Q 035779 375 R-----M-----------GIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNI 438 (659)
Q Consensus 375 ~-----m-----------~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~i 438 (659)
. . ++.|.+|++++|||.||+.+++|++.+ ++.+.++++++++++|++.|+++||. .+++.+.
T Consensus 488 ~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~l-Gd~~~A~~~~~~A~~lk~a~~~~~Wd-g~~y~ra 565 (811)
T 3qde_A 488 NCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYM-GLEEEARKAQQHIDAMKEAILKYGYD-GEWFLRA 565 (811)
T ss_dssp SCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHSBC-SSSBCCE
T ss_pred cccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccC-cCeEEEE
Confidence 1 1 257999999999999999999999998 67788999999999999999999994 4453222
Q ss_pred hhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHH-HHHHHHHHHHH
Q 035779 439 YRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPA-QATAIMDLIEE 517 (659)
Q Consensus 439 yr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~e-qa~~Vl~~V~~ 517 (659)
|.. + |-.+|.. ...+.|+++.++.|++++|+++++ |++++|+.|.
T Consensus 566 ~~~------------------------------d-g~~~gs~--~~~~~qi~~~~q~~avlsGia~~e~ra~~~m~~v~- 611 (811)
T 3qde_A 566 YDD------------------------------F-GRKVGSK--ENEEGKIFIESQGFCVMAEIGLEDGKALKALDSVK- 611 (811)
T ss_dssp ECT------------------------------T-SCEESST--TSSSCCEESHHHHHHHHTTCSSSSSHHHHHHHHHH-
T ss_pred EcC------------------------------C-CCCCCcc--CCCCceEEecchhHHHHhCCCCchHHHHHHHHHHH-
Confidence 211 1 1111211 112336889999999999999999 9999999996
Q ss_pred HHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHh-----
Q 035779 518 RWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRL----- 592 (659)
Q Consensus 518 ~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l----- 592 (659)
++|++|+|+|+|+|++....+ ..+....|.|.+||||++|||.+.+++.|++|+|+.++|.+++..+....
T Consensus 612 --~~L~t~~Glrll~p~f~~~~~--d~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~~~~~~~ 687 (811)
T 3qde_A 612 --KYLDTPYGLVLQNPAFTRYYI--EYGEISTYPPGYKENAGIFCHNNAWIICAETVVGRGDMAFDYYRKIAPAYIEDVS 687 (811)
T ss_dssp --HHHCCTTCCCSEESCCCSCCT--TTGGGGTSCTTSTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHCGGGSGGGH
T ss_pred --HHhCCCcceEeecCCccccCC--CCCceeccCCCccccccccchHHHHHHHHHHHcCCHHHHHHHHHHhChhhhcchh
Confidence 489999999999998753211 11344568999999999999999999999999999999999999873221
Q ss_pred -cCCCCCccccCCC----CCCCCCCCCccchHHHH---HHH--HHHHHhc-CCChhhh
Q 035779 593 -SKDGWPEYYDGKT----GRYVGKQARKYQTWSIA---GYL--VAKMMVE-NPSNLLM 639 (659)
Q Consensus 593 -~~~~~pE~fDG~~----g~p~G~~ac~~QAWSaA---~~L--~a~~lL~-~P~~~~~ 639 (659)
...+.||+|++.. .+..| |..|+|..+ -++ ++..+|| +|+..++
T Consensus 688 ~~~~~~Py~~~~~~~~~~~p~~G---r~~~~w~tGsa~w~~~~~ve~~lGl~~~~~~L 742 (811)
T 3qde_A 688 DIHKLEPYVYAQMVAGKDAKRHG---EAKNSWLTGTAAWNFVAISQWILGVKPDYDGL 742 (811)
T ss_dssp HHHCSCTTSCEEEECCTTSTTTT---CEEEESCSTHHHHHHHHHHHTTSCEEEETTEE
T ss_pred hhcCcCcEEeccccccccCCCCC---CCcchhHHHHHHHHHHHHHHHhceeEEECCEE
Confidence 1246799988754 23445 457888553 323 5567888 8876443
No 3
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=100.00 E-value=2.1e-32 Score=316.74 Aligned_cols=374 Identities=17% Similarity=0.138 Sum_probs=260.8
Q ss_pred hHHHHHHHHHHhhhccccCccceeeccC--CCCcccCCCCC--CchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccc
Q 035779 192 AMMEEALERLKKSYVYFKGKPVGTFAAM--DPNAEALNYNQ--VFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGW 267 (659)
Q Consensus 192 ~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~--d~~~~~~nY~~--vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~ 267 (659)
.+...|+..|+..+. .+.|+|... =|+.+.+||.. +|+||+.+.+++++. .++++||++|+.++++|.+
T Consensus 282 ~l~~~a~~tL~~n~~----~~~g~v~~~~v~P~~g~~wF~~~~~w~wDs~~~a~gL~~---~~~elAr~~L~~l~~~Q~~ 354 (761)
T 3c68_A 282 RVAVKAIETLNGNWR----SPGGAVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAH---FNPDIAKENIRAVFSWQIQ 354 (761)
T ss_dssp HHHHHHHHHHHHTEE----CCBTTBCSCEECSCTTCTTTCTTCBCHHHHHHHHHHHTT---TCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhcc----CccCcCCCCeEEecCCCCCCCcCCeeccHHHHHHHHHHH---cCHHHHHHHHHHHHHhhhh
Confidence 455555555555541 223444321 14456789998 999999999998876 7999999999999999865
Q ss_pred ccccccccc-CCCccCCcceecccccccccccccCCCCCCCCCcCC-CCcHHHHHHHHHHHHHHcCChhhhc--cHHHHH
Q 035779 268 EKRIDNFTL-GEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAP-VDSGFWWIILLRSYTKCTRDYALAE--LPEVQR 343 (659)
Q Consensus 268 ~~~ld~~~~-~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~s-VDatLWfIill~~Y~~~TGD~sfl~--~p~vq~ 343 (659)
. .|.++. .+|.||+.+. +.+ . ...+|... .++. ...+++|++++++|+++|||.+|++ .|.+++
T Consensus 355 ~--~d~~r~~~~G~IP~~~~--~~~--~----p~r~g~~~--~~~~~~sqPPl~~~av~~yy~~tgD~~fL~e~~P~L~~ 422 (761)
T 3c68_A 355 P--GDSVRPQDVGFVPDLIA--WNL--S----PERGGDGG--NWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVA 422 (761)
T ss_dssp T--TCSSCGGGTTCCCSBBC--SSC--C----GGGTSCCS--SCBCSCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred c--ccCCccCCCCEeeeeec--cCC--c----ccccCccc--cccCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4 355553 5899999652 111 0 01112110 1111 2334788999999999999999999 699999
Q ss_pred HHHHHHHhcc--CCCCCcCCcc------------------------------------------------cccCCCCccc
Q 035779 344 GMKLILNLCL--SDGFDTFPTL------------------------------------------------LCADGCSMID 373 (659)
Q Consensus 344 aL~~Il~~~~--~dGf~~~p~L------------------------------------------------l~~Dg~~~mD 373 (659)
.++|+.+..+ .+|+..|... +...|.++||
T Consensus 423 ~~~w~~~~rd~d~~GL~~y~~~~~~~~~~prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~a~weSG~D 502 (761)
T 3c68_A 423 YHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRD 502 (761)
T ss_dssp HHHHHHHHSCTTCSSCCCCEEECCTTTBCTTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHHHHHHHHHHTCT
T ss_pred HHHHHHhCCCCCcCccEEecccccccccCCCcchhccccccccchhcccccccchhccccccccchhhhhhhccccCCCC
Confidence 9999998753 3476654210 0000111221
Q ss_pred ------------------------ccC-------CCCCC---------chhhHHHHHHHHHHHHHhcccCCCChHHHHHH
Q 035779 374 ------------------------RRM-------GIYGY---------PIEIQSLFYFALRCARQMLKPERDGKELIERI 413 (659)
Q Consensus 374 ------------------------~~m-------~r~G~---------PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l 413 (659)
.+. +..|. +|++||+||.|++.+++|++.+ |+.+.++++
T Consensus 503 ~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~L-G~~e~A~~y 581 (761)
T 3c68_A 503 DAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATIL-GKPEEAKRY 581 (761)
T ss_dssp TCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHH
T ss_pred cchhccccccccccccccccccccchhhhhccccccccccccCcccccCHHHHHHHHHHHHHHHHHHHHh-CChHHHHHH
Confidence 111 22243 8899999999999999999999 677788999
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccc
Q 035779 414 DKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVG 493 (659)
Q Consensus 414 ~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalG 493 (659)
+++++++++.|+++||.++.++. |++. +.. ..+. + +. .|.+. ..+.+..+
T Consensus 582 ~~~A~~lk~ai~~~fWd~e~G~y--~D~~--------~~~-----~~~~---------~-~~-~g~~~----sn~~~~~s 631 (761)
T 3c68_A 582 RQLAQQLADYINTCMFDPTTQFY--YDVR--------IED-----KPLA---------N-GC-AGKPI----VERGKGPE 631 (761)
T ss_dssp HHHHHHHHHHHHHHTEETTTTEE--CCEE--------CCS-----SCCT---------T-SC-SSCBC----GGGCCCGG
T ss_pred HHHHHHHHHHHHHhCcCccCCEE--EEEe--------cCC-----Cccc---------c-cc-cccee----ecchhhHH
Confidence 99999999999999998654421 0110 000 0000 0 00 00000 01234577
Q ss_pred hhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHH
Q 035779 494 NCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASI 573 (659)
Q Consensus 494 N~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~ 573 (659)
+++++++|+++++|++++++.|.+ -..|.+++|+++++|. +|.++|.+||||+|||..+++++.|+.
T Consensus 632 ~~~pL~~Gl~~~e~a~~vl~~L~~-~~~l~t~~Girtls~~------------~p~y~p~~yw~GpvW~~~~~lli~aL~ 698 (761)
T 3c68_A 632 GWSPLFNGAATQANADAVVKVMLD-PKEFNTFVPLGTAALT------------NPAFGADIYWRGRVWVDQFWFGLKGME 698 (761)
T ss_dssp GGHHHHTTCSCHHHHHHHHHHHTC-TTTTCCSSCSCSSCTT------------CTTCCTTCTTTTCEEHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHhC-hhhhcCCCCccccCCC------------CcccCCCccccCCcccchHHHHHHHHH
Confidence 889999999999999999999953 1268899999999982 456778999999999988888899999
Q ss_pred HcCChHHHHHHHHHHHHH----hcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHh
Q 035779 574 KTGRPQIAKRAIELAEQR----LSKDGWPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMV 631 (659)
Q Consensus 574 k~G~~~~A~~ll~~~~~~----l~~~~~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL 631 (659)
++|+.+.|.+++..+... ...+.++|+||+.+|.+.| |.+|+||+|.+|.+....
T Consensus 699 ~~G~~d~A~~l~~~~~~~~~~~~~~G~~~E~yd~~tg~p~G---~~~fgWSaa~~l~ll~~y 757 (761)
T 3c68_A 699 RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQG---APNFSWSAAHLYMLYNDF 757 (761)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTTTSSSCCCSEECTTTCCEES---CSSCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHHHHHHhhCCceeeEecCCCCCcCc---CCCchHHHHHHHHHHHHH
Confidence 999999999998876442 2335689999999887766 579999999988665543
No 4
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=100.00 E-value=1.1e-33 Score=327.51 Aligned_cols=348 Identities=17% Similarity=0.190 Sum_probs=241.0
Q ss_pred CCch-hhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCC-ccCCcceeccccccccccc------ccC
Q 035779 230 QVFV-RDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEG-VMPASFKVLFNSHQQKETL------VAD 301 (659)
Q Consensus 230 ~vfG-RDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~G-liP~~fki~h~p~~~~e~~------~~d 301 (659)
..|| ||+++++++++. ++|++||++|+.+++.|.. +| .+|+.+...+++..|.... ...
T Consensus 344 ~~~G~RD~~~~~~~l~~---~~p~~ar~~l~~~~~~Q~~----------~G~~~p~~~p~~~~~~~g~~~~~~~~~~~g~ 410 (807)
T 1v7w_A 344 TGLGYRDTAQDAISVPH---ANPEMTRKRIVDLLRGQVK----------AGYGLHLFDPDWFDPEKEDVAPSKSPTVVPT 410 (807)
T ss_dssp CSEEHHHHHHHTTSCTT---TCHHHHHHHHHHHHHTBCT----------TSCBCSEECGGGGCC----------------
T ss_pred CccCchHHhHHHHHHhh---cCHHHHHHHHHHHHhcccc----------CCCcceeeeeccccccccccCCccccccccC
Confidence 4699 999999999875 8999999999999988865 34 4454331111111110000 000
Q ss_pred CCCCC--CC-CcCCCCcHHHHHHHHHHHHHHcCChhhhc--cH-----------HHHHHHHHHHHhccCCCCCcCCcccc
Q 035779 302 FGGSA--IG-RVAPVDSGFWWIILLRSYTKCTRDYALAE--LP-----------EVQRGMKLILNLCLSDGFDTFPTLLC 365 (659)
Q Consensus 302 fG~~a--iG-~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p-----------~vq~aL~~Il~~~~~dGf~~~p~Ll~ 365 (659)
.|+.. +| +..-.|+++||++++++|+++|||.+|++ .| +++++++|+++..+.+|+..+ ..
T Consensus 411 ~~~~~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~~~GL~~~---~~ 487 (807)
T 1v7w_A 411 PSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQTGICKG---LR 487 (807)
T ss_dssp ------CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCTTSCBEE---ET
T ss_pred CCcchhhcCCCCCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCCCCCCccc---CC
Confidence 11111 11 11224999999999999999999999999 46 599999999997766676543 24
Q ss_pred cCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccc-hhhhhhcccc
Q 035779 366 ADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQ-LNNIYRYKTE 444 (659)
Q Consensus 366 ~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~-l~~iyr~~te 444 (659)
+||.+.++. + .|.++++|+|||.||+.+++|++.+ |+.+.++++++++++|++.|+++||+++.. +.+.|.
T Consensus 488 ~DW~D~~~~--~-~g~~v~~~a~~y~al~~~a~la~~l-G~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f~~~~~---- 559 (807)
T 1v7w_A 488 ADWNDCLNL--G-GGESSMVSFLHFWALQEFIDLAKFL-GKDQDVNTYTEMAANVREACETHLWDDEGGWYIRGLT---- 559 (807)
T ss_dssp CSSSTTCCC--E-EEEEHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEEC----
T ss_pred CCCCCcCCC--C-CCeehhHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccCCCCCeeeeeec----
Confidence 566554542 3 7899999999999999999999998 677789999999999999999999976422 110000
Q ss_pred chhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q 035779 445 EYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIG 524 (659)
Q Consensus 445 ~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Llt 524 (659)
.+|. .+|. ....+.+++..+|.+++++|+++++|++++++.|. ++|.+
T Consensus 560 --------------------------~d~~-~~g~--~~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~---~~L~~ 607 (807)
T 1v7w_A 560 --------------------------KNGD-KIGT--AQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVD---EHLFS 607 (807)
T ss_dssp --------------------------TTSC-EESC--TTCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHH---HHHEE
T ss_pred --------------------------cCCC-CcCC--ccCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHH---HhcCC
Confidence 0110 0111 11123367789999999999999999999999995 48889
Q ss_pred CCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHH--HH--------hcC
Q 035779 525 EMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAE--QR--------LSK 594 (659)
Q Consensus 525 p~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~--~~--------l~~ 594 (659)
++|+|+++|++.... ...++-..+.|..||||++|||.+++++.|++++|+.++|.+++..+. .+ .+.
T Consensus 608 ~~G~~~~~p~~~~~~--~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~G~~d~A~~l~~~~~p~~~~~~~~~~~~ep 685 (807)
T 1v7w_A 608 PYGLHLNAPSFSTPN--DDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDALNPYNQNDIIEKRIAEP 685 (807)
T ss_dssp TTEECSEESCCCSCC--TTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHHHHHHHHHCGGGGTTCHHHHCSCT
T ss_pred CCceeecCCcccccC--cCCceeeccCCccccccccccchHHHHHHHHHHcCCHHHHHHHHHHhChhhhhhhhhhhccCc
Confidence 999999999874211 111223457788899999999999999999999999999999988762 11 112
Q ss_pred CCCCccccCCCCCCCCCCCCccchH---HHHHHH--HHHHHhc-CCChhh
Q 035779 595 DGWPEYYDGKTGRYVGKQARKYQTW---SIAGYL--VAKMMVE-NPSNLL 638 (659)
Q Consensus 595 ~~~pE~fDG~~g~p~G~~ac~~QAW---SaA~~L--~a~~lL~-~P~~~~ 638 (659)
+.+.+..+|..++..|. ..|+| |++.++ ++..++| +|+..+
T Consensus 686 ~~~~~~~~~~~~~~~~~---~~~aW~~gsa~w~~~~l~~~~lGi~p~~~~ 732 (807)
T 1v7w_A 686 YSYVQFIMGRDHQDHGR---ANHPWLTGTSGWAYFAVTNYILGVQSGFTG 732 (807)
T ss_dssp TSCEEEECCTTSTTTTC---EEEESSCTHHHHHHHHHHHTTSCEECCSSC
T ss_pred ccccccccCccCCCCCC---cCCcccccHHHHHHHHHHHHheeeeeeCCc
Confidence 22332333433233343 35999 655544 4567888 888443
No 5
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-32 Score=295.61 Aligned_cols=345 Identities=15% Similarity=0.111 Sum_probs=247.7
Q ss_pred hHHHHHHHHHHhhhccccCccceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHh-hcccccc
Q 035779 192 AMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLH-LQGWEKR 270 (659)
Q Consensus 192 ~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~-lQ~~~~~ 270 (659)
.|.+.|.+.|+.+. +..+++++. -+|..+|+||+.+.+++++. .+++.+++.|+.++. .|
T Consensus 3 ~l~~~a~~~l~~n~-----~~~~~vP~~------~~f~~~~~wDs~~~~~gl~~---~~~~~a~~~l~~~~~~~q----- 63 (420)
T 2z07_A 3 PLRTKAVEVLQRNS-----RGAFTVPAH------GLYPYQWLWDSAFIALGWTQ---VDWERAWQELLCLFDYGQ----- 63 (420)
T ss_dssp CHHHHHHHHHHHHB-----CSSCBCSST------TCCSCEEHHHHHHHHHHHTT---TCHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHcC-----CCCCcCCCC------CCCCCccHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHH-----
Confidence 46788888888764 223445543 38999999999999999988 688999888877776 65
Q ss_pred ccccccCCCccCCcceecccccccccccccCCCCCCC-CC-cCCCCcHHHHHHHHHHHHHHcCC----hhhhc--cHHHH
Q 035779 271 IDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAI-GR-VAPVDSGFWWIILLRSYTKCTRD----YALAE--LPEVQ 342 (659)
Q Consensus 271 ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~ai-G~-v~sVDatLWfIill~~Y~~~TGD----~sfl~--~p~vq 342 (659)
..+|.||+.+. +...+........+|...- +. ..+.|.++++++++++|+++||| .+|++ .|.++
T Consensus 64 -----~~~G~ip~~v~--~~~~~~y~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~~p~l~ 136 (420)
T 2z07_A 64 -----GPDGMLPHIVF--HEQSRDYFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARYLFPKLL 136 (420)
T ss_dssp -----CTTCCCCSEEE--CCSCCCCC-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH
T ss_pred -----hhCCCcceecc--cCCCcccCcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHHHHHHHH
Confidence 25899998441 2110000000000110000 00 13578899999999999999999 89999 59999
Q ss_pred HHHHHHHHhcc--CCCCCcCCcccccCCC----Cccccc----CC-----------------------------------
Q 035779 343 RGMKLILNLCL--SDGFDTFPTLLCADGC----SMIDRR----MG----------------------------------- 377 (659)
Q Consensus 343 ~aL~~Il~~~~--~dGf~~~p~Ll~~Dg~----~~mD~~----m~----------------------------------- 377 (659)
+.++|+.+..+ .+|+..+..- ..+|. .|.|.. .+
T Consensus 137 ~~~~~~~~~~d~~~~Gl~~~~~~-we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~~~~~~~ 215 (420)
T 2z07_A 137 AFHRWLYHARDPYRTGLVVIVHP-WESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFR 215 (420)
T ss_dssp HHHHHHHHHHCTTCCSCCCBSSG-GGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCceeeecC-CCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHHHHHHHHHH
Confidence 99999988653 3466432110 11111 343320 00
Q ss_pred --------------CCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccc
Q 035779 378 --------------IYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKT 443 (659)
Q Consensus 378 --------------r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~t 443 (659)
..+.+|++||++|.|++.+++|++.++.+ ++++.++++++++.|++ ||++..+
T Consensus 216 esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~~---a~~~~~~a~~~~~ai~~-~Wd~~~g--------- 282 (420)
T 2z07_A 216 RLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQED---PYEIEEWIVRGEVGLEA-LWDREAG--------- 282 (420)
T ss_dssp HTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHH-TEETTTT---------
T ss_pred HcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHH-hhCcccC---------
Confidence 11347899999999999999999999544 77888889999999999 9975433
Q ss_pred cchhhhhhcccccCCCCCCccccccccCCCceEEeee-cCCcccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 035779 444 EEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNV-SPARMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDL 522 (659)
Q Consensus 444 e~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v-~P~~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~L 522 (659)
++++.. ..+.. .......+++++++|+++++++++|++.+. ++
T Consensus 283 -------------------------------~~~d~~~~~g~~-~~~~~~~~~~pL~~g~~~~~~a~~v~~~l~----~~ 326 (420)
T 2z07_A 283 -------------------------------FYFSWDLVAGEP-IAVKTSAGFLPLFAGTPHQGRASLLAQEAE----RW 326 (420)
T ss_dssp -------------------------------EECCEETTTTEE-CCCCBGGGGTHHHHTCSCHHHHHHHHHHHH----HH
T ss_pred -------------------------------eeEeeeCCCCCe-eccccHHhHHHHHcCCCCHHHHHHHHHHHH----HH
Confidence 111111 11110 012356677899999999999999999984 57
Q ss_pred h--cCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhcCCCCCcc
Q 035779 523 I--GEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSKDGWPEY 600 (659)
Q Consensus 523 l--tp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~~~~~pE~ 600 (659)
+ +++|+++++| ++|.++|.+||+|+|||+++++++.|+.++|+.+.|.+++......+...++.|+
T Consensus 327 ~~~~~~gi~t~~~------------~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~~~~~~E~ 394 (420)
T 2z07_A 327 GEKARYLLPSVDP------------TSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALMEREGFREY 394 (420)
T ss_dssp TTTCSSSCBSBCT------------TSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCSEEE
T ss_pred hccCCCCcCcCCC------------cCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCCeeee
Confidence 7 8999999887 3567788999999999999999999999999999999998887666666778899
Q ss_pred ccCCCCCCCCCCCCccchHHHHHHHHH
Q 035779 601 YDGKTGRYVGKQARKYQTWSIAGYLVA 627 (659)
Q Consensus 601 fDG~~g~p~G~~ac~~QAWSaA~~L~a 627 (659)
||+.+|.+.| |.+|+||+|.+|.+
T Consensus 395 yd~~~g~~~g---~~~fgWs~~~~l~l 418 (420)
T 2z07_A 395 YDPLTGQGRG---GEGFSWSAALALFW 418 (420)
T ss_dssp ECTTTCCEEE---EESCHHHHHHHHHH
T ss_pred eCCCCCCcCC---CCCCchHHHHHHHH
Confidence 9999887665 57999999988754
No 6
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=99.98 E-value=2.2e-31 Score=297.45 Aligned_cols=313 Identities=14% Similarity=0.135 Sum_probs=233.1
Q ss_pred CCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCC
Q 035779 226 LNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGS 305 (659)
Q Consensus 226 ~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~ 305 (659)
-||..+|+||+.++++|++.. +.+++||++|..++.+|. ..|.|||..+ +
T Consensus 121 g~F~~~~~WDs~f~~~gLl~~--~~~~~A~~~l~~~~~~~~----------~~G~IPng~r-------------~----- 170 (535)
T 2jg0_A 121 GRFREVYYWDSYFTMLGLAES--GHWDKVADMVANFAHEID----------TYGHIPNGNR-------------S----- 170 (535)
T ss_dssp TTBCSCBHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHH----------HHSSCCSBSB-------------G-----
T ss_pred ccccccchHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhhc----------cCCcccCCCC-------------c-----
Confidence 599999999999999999997 999999999999999873 3799998431 1
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHHhcc--------------CCC--CCcCCcc----
Q 035779 306 AIGRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLCL--------------SDG--FDTFPTL---- 363 (659)
Q Consensus 306 aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~~~~--------------~dG--f~~~p~L---- 363 (659)
+|+ +++.+++|++++++|+++|+| +|++ .|.+++.++|.++..+ .+| +..|..-
T Consensus 171 yY~---~~sqPPl~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~~l~~y~~~~~~p 246 (535)
T 2jg0_A 171 YYL---SRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTP 246 (535)
T ss_dssp GGT---TCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCEEECCCCSCCSC
T ss_pred cCC---CCCCccHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHhCCcccCccccccceeecCCCCcceeeccCCCCC
Confidence 232 367788899999999999986 8888 5999999999776432 123 2111100
Q ss_pred --------------c--------c-----cCCCCcccc--cCCCCC----------CchhhHHHHHHHHHHHHHhcccCC
Q 035779 364 --------------L--------C-----ADGCSMIDR--RMGIYG----------YPIEIQSLFYFALRCARQMLKPER 404 (659)
Q Consensus 364 --------------l--------~-----~Dg~~~mD~--~m~r~G----------~PVEIQALwY~ALr~aaeLa~~~~ 404 (659)
+ + .-.+.|-++ +....| .|||+||++|+|++.+++|++.+
T Consensus 247 rpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~lA~~l- 325 (535)
T 2jg0_A 247 RPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAA- 325 (535)
T ss_dssp CGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHHHHHHh-
Confidence 0 0 000122221 111122 57999999999999999999998
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCc
Q 035779 405 DGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPAR 484 (659)
Q Consensus 405 ~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~ 484 (659)
|+.+.++++.++++.+++.|+++||+++.+ ++++..-...
T Consensus 326 G~~~~a~~~~~~A~~lk~ai~~~fWdee~G----------------------------------------~y~D~~~~~~ 365 (535)
T 2jg0_A 326 GDNAMANQYETLANARQKGIEKYLWNDQQG----------------------------------------WYADYDLKSH 365 (535)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHSEETTTT----------------------------------------EECCEETTTT
T ss_pred CChHHHHHHHHHHHHHHHHHHHhCcCCCCC----------------------------------------EEEEEeCCCC
Confidence 677788999999999999999999975433 2222111111
Q ss_pred ccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCC-cchh
Q 035779 485 MDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGG-SWPV 563 (659)
Q Consensus 485 ~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGg-VWP~ 563 (659)
...+.+...+++++++|+++++|+++|++.|. ++|.+++|++++++ ++.+||+|+ |||+
T Consensus 366 ~~~~~~~~s~~~PL~~gi~~~e~a~~v~~~l~---~~l~t~~GlrT~s~-----------------~s~~yW~GpNvW~~ 425 (535)
T 2jg0_A 366 KVRNQLTAAALFPLYVNAAAKDRANKMATATK---THLLQPGGLNTTSV-----------------KSGQQWDAPNGWAP 425 (535)
T ss_dssp EECCCCBGGGGHHHHTTCSCHHHHHHHHHHHH---HHTEETTEECSBSC-----------------CCSSSSSTTEECHH
T ss_pred CEeeeehhhhHHHHhcCCCCHHHHHHHHHHHH---HHhccCCCCCCCcC-----------------CCccccCCCCcchh
Confidence 11134667788899999999999999999996 48999999988874 235789999 9999
Q ss_pred hHHHHHHHHHHcCChHHHHHHHHHHHHHhc-----CCCCCccccCCCCCCCCC----CCCccchHHHHHHHHHHHHhcC
Q 035779 564 LLWLLTAASIKTGRPQIAKRAIELAEQRLS-----KDGWPEYYDGKTGRYVGK----QARKYQTWSIAGYLVAKMMVEN 633 (659)
Q Consensus 564 llg~~~~Al~k~G~~~~A~~ll~~~~~~l~-----~~~~pE~fDG~~g~p~G~----~ac~~QAWSaA~~L~a~~lL~~ 633 (659)
++++++.|+.++|+.+.|.++...+...+. .+.++|+||+.++.+.|. ..+..|+||+|.+|.+....++
T Consensus 426 ~~~l~i~gL~~yG~~~~A~~la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~~y~~ 504 (535)
T 2jg0_A 426 LQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICP 504 (535)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHhhh
Confidence 999999999999999999888766543332 378999999987655553 1248999999998866555543
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.93 E-value=4.5e-24 Score=252.37 Aligned_cols=311 Identities=16% Similarity=0.165 Sum_probs=224.3
Q ss_pred CCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCCCC
Q 035779 229 NQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIG 308 (659)
Q Consensus 229 ~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG 308 (659)
...|.||+.+++++++.. .+.++.+|+.|+.+++.|. .+|.+|+.+ | ... .
T Consensus 573 r~~W~gD~~~~a~~~l~~-~g~~~lar~~L~~l~~~Q~----------~dG~ip~~~-----p---------~~~----~ 623 (956)
T 2okx_A 573 QVFWVGDSRNEALVNYYV-FGETEIVERCLNLVPGSAD----------ETPLYLDQV-----P---------SAW----S 623 (956)
T ss_dssp CCCBHHHHHHHHHHHHHH-TCCCHHHHHHHHHGGGGTT----------TCTTCCSBS-----S---------CSS----C
T ss_pred CCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhcc----------cCCCcCccc-----c---------ccc----c
Confidence 458999999999988663 4899999999998887653 478899855 2 100 0
Q ss_pred CcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhH
Q 035779 309 RVAPVDSGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQ 386 (659)
Q Consensus 309 ~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQ 386 (659)
....|.++||++++++|+++|||.+|++ +|.++++++|+.++.+.+|+..++.- .-.+|.|..-+..|.++..|
T Consensus 624 -~~~~~~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~~~~d~~GLl~~~~~---~~~DW~d~~~~~~G~~~~~~ 699 (956)
T 2okx_A 624 -SVIPNWTFFWILACREYAAHTGNEAFAARIWPAVKHTLTHYLEHIDDSGLLNMAGW---NLLDWAPIDQPNEGIVTHQN 699 (956)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTBCTTSSBCCSSC---CCCCSSSCCCCSSSEEHHHH
T ss_pred -CCCcChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEeCCC---CccCccCCCCCCCCcCHHHH
Confidence 1236899999999999999999999999 69999999999987766777655421 11345553225678899999
Q ss_pred HHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCcccc
Q 035779 387 SLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVF 466 (659)
Q Consensus 387 ALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~ 466 (659)
+++|.||+.+++|++.+ ++.+.++++++++++|++.|+++||.+..+
T Consensus 700 a~~~~al~~~a~lA~~L-G~~~~a~~y~~~A~~lk~ai~~~~wd~~~g-------------------------------- 746 (956)
T 2okx_A 700 LFLVKALRDSRALAAAA-GATEEADAFAARADLLAETINAVLWDEEKR-------------------------------- 746 (956)
T ss_dssp HHHHHHHHHHHHHHHHT-TCGGGGHHHHHHHHHHHHHHHHHSEETTTT--------------------------------
T ss_pred HHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHhcCCCCC--------------------------------
Confidence 99999999999999999 555668889999999999999999975433
Q ss_pred ccccCCCceEEeeecCC-cccccccccchhHHHhcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeec
Q 035779 467 DFMPLRGGYLIGNVSPA-RMDFRWFLVGNCIAILSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTG 545 (659)
Q Consensus 467 ~w~~~~GGYl~g~v~P~-~~d~RifalGN~LALlsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~ 545 (659)
++.+.+++. .........+|++++++|+++++++++| +.+ +.+ +
T Consensus 747 --------~y~d~~~~~g~~~~~~~~~s~~lall~Gl~p~~~~~av-~~L-------l~~-------~------------ 791 (956)
T 2okx_A 747 --------AYIDCIHADGRRSDVYSMQTQVVAYLCGVAQGEREAVI-EGY-------LSS-------P------------ 791 (956)
T ss_dssp --------EECSEECTTSCBCCCCBHHHHHHHHHTTCSCHHHHHHH-HHH-------HHS-------C------------
T ss_pred --------EEEeeecCCCCcccccccHHHHHHHHhCCCCHHHHHHH-HHH-------hcC-------C------------
Confidence 222222111 0000123567889999999999998877 433 211 0
Q ss_pred CCCCCCCccccc-CCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHh-c--CCCCCccccCCCCCCC---CCCCCccch
Q 035779 546 YDPKNTRWSYHN-GGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRL-S--KDGWPEYYDGKTGRYV---GKQARKYQT 618 (659)
Q Consensus 546 gdp~~rP~SYHN-GgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l-~--~~~~pE~fDG~~g~p~---G~~ac~~QA 618 (659)
|.+||+ |++||+ ++++.|+.++|+.+.|.+++....... . ...++|.||+..+... +...+..|+
T Consensus 792 ------~~gy~~~Gt~w~~--~~li~aLar~G~~d~A~~ll~~~~~~~~~~g~tt~~E~~d~~~~~~~~~~~~~~s~nh~ 863 (956)
T 2okx_A 792 ------PPAFVQIGSPFMS--FFYYEALEKAGRQTLMLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNPDMLTRSHCHA 863 (956)
T ss_dssp ------CTTSBCCCSHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCSSCCSSCSSCCTTSSSTTSSCSCSCCG
T ss_pred ------CcccccCCChhHH--HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCccceeccCCCCCcccCCCcccccCcH
Confidence 346887 999987 999999999999999999997543222 2 2358999998653211 111135699
Q ss_pred HHHHH-HHHHHHHhc-CCChhhhccchhhhcc
Q 035779 619 WSIAG-YLVAKMMVE-NPSNLLMISLEEDKKI 648 (659)
Q Consensus 619 WSaA~-~L~a~~lL~-~P~~~~~~~~~~~~~~ 648 (659)
|++|. ..+.+.++| +|...|.-.+.-.|.+
T Consensus 864 Wsag~~~~L~q~l~GI~p~~pG~~~i~i~P~l 895 (956)
T 2okx_A 864 WSAAPGYFLGSSILGVKRGADGWRTVDIAPQP 895 (956)
T ss_dssp GGCTHHHHHHHTTSCEEECSGGGSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCccccCCCCCEEEEEeCC
Confidence 99974 446677888 8887774444333333
No 8
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.91 E-value=4.2e-23 Score=238.01 Aligned_cols=335 Identities=16% Similarity=0.176 Sum_probs=232.3
Q ss_pred CCCCC-cchHHHHHHHHHHhhhccccCccceeeccCCCCcccCCC-CCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 035779 185 NGEST-GAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNY-NQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTL 262 (659)
Q Consensus 185 ~~~~~-~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~~~~nY-~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a 262 (659)
.|+|+ +++++++.|+.-..++- ++..++. .| . +-+ ...|..|..++++..+.. .++++.+++.|..+
T Consensus 301 ~g~f~~sd~~lN~i~~~~~~t~~---~n~~~~~--~D---c-P~RER~~W~GD~~~~~~~~~~~-~~~~~~~~~~l~~~- 369 (739)
T 3cih_A 301 RGNFRCNDEELNCIWEVGAYTMH---LTTREFF--ID---G-IKRDRWVWSGDAIQSYLMNYYL-FFDSESVKRTIWLL- 369 (739)
T ss_dssp CCEEEESCHHHHHHHHHHHHHHH---HTBSSSB--CS---B-SSSCCCCCHHHHHHHHHHHHTT-TCCHHHHHHHHHHH-
T ss_pred cceeecChHHHHHHHHHHHHHHH---HhccCCC--cc---C-cccccceecCchHHHHHHHHHH-hCCHHHHHHHHHHh-
Confidence 44444 46788888876665551 1211111 12 1 122 468999999998876642 37999999987542
Q ss_pred hhccccccccccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhc--cHH
Q 035779 263 HLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAE--LPE 340 (659)
Q Consensus 263 ~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~--~p~ 340 (659)
| |.+|.. +.+ +. .+|.++||++++++|+++|||.+|++ .|.
T Consensus 370 --~-------------g~~p~~---------------~~~-----~~--~~d~~l~wi~~~~~yy~~tGD~~~L~e~~p~ 412 (739)
T 3cih_A 370 --R-------------GKDPVT---------------SHS-----NT--IMDYTFYWFLSVYDYYMYSGDRHFVNQLYPR 412 (739)
T ss_dssp --H-------------CCSSCC---------------SSG-----GG--BHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred --c-------------cCCCCc---------------ccc-----CC--ccchhHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 2 222320 011 11 26999999999999999999999999 699
Q ss_pred HHHHHHHHHHhccCCCCCcCCcccccCC--CCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHH
Q 035779 341 VQRGMKLILNLCLSDGFDTFPTLLCADG--CSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRIT 418 (659)
Q Consensus 341 vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg--~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~ 418 (659)
++++|+|+.+..+.+|+.... .+|| .+|+|..+++.|.++++|+++|.||+.+++|++.+ |+.+.+++++++++
T Consensus 413 l~~~ld~~~~~~d~~GL~~~~---~G~W~~~dW~d~~~~~~G~~~~~~a~~y~al~~~a~lA~~l-G~~~~A~~y~~~A~ 488 (739)
T 3cih_A 413 MQTMMDYVLGRTNKNGMVEGM---SGDWVFVDWADGYLDKKGELSFEQVLFCRSLETMALCADLV-GDKDGQQKYEKLAS 488 (739)
T ss_dssp HHHHHHHHHTTBCTTSCBCCC---TTCBCCSCCCTTCCCCSSEEHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcccC---CCCcccCCCcccccCCCCcchHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHH
Confidence 999999999877667776542 2333 47888657788999999999999999999999999 67778999999999
Q ss_pred HHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHH
Q 035779 419 ALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAI 498 (659)
Q Consensus 419 ~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LAL 498 (659)
+|++.|+++||.++.+ -|..+..+..+.| .+...+|++++
T Consensus 489 ~lk~a~~~~~wd~~~G---------------------------------------~y~~~~~~G~~~d-~~~~~s~~laL 528 (739)
T 3cih_A 489 ALKAKLEPTFWNNQKQ---------------------------------------AFVHNCVDGRQSD-AVTRYANMFSV 528 (739)
T ss_dssp HHHHHHHHHHEETTTT---------------------------------------EECSEEETTEECS-CCCHHHHHHHH
T ss_pred HHHHHHHHhccCcccC---------------------------------------eeEeecCCCCcCc-ccchHHhHHHH
Confidence 9999999999965332 1111111111111 13445788999
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCCh
Q 035779 499 LSSLATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRP 578 (659)
Q Consensus 499 lsgll~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~ 578 (659)
++|+++++++++|++.+.. + + ..||+| ||+++++++.|+.++|+.
T Consensus 529 ~~Gl~~~e~~~~v~~~L~~-------~-------~-------------------~~~~~~--tp~~~~~~~~aL~~~G~~ 573 (739)
T 3cih_A 529 FFDYLNADKQQAIKQSVLL-------N-------D-------------------EILKIT--TPYMRFYELEALCALGEQ 573 (739)
T ss_dssp HTTCSCHHHHHHHHHHTTT-------C-------T-------------------TSCCCC--SHHHHHHHHHHHHHTTCH
T ss_pred HHCCCCHHHHHHHHHHHhc-------C-------c-------------------cccccc--chhHHHHHHHHHHHcCCH
Confidence 9999999999988887521 0 1 125776 689999999999999999
Q ss_pred HHHHHHHHHH-HHHhcCC--CCCccccCCCC---------CCCCCCCCccchHHHH-HHHHHHHHhc-CCChhhhccchh
Q 035779 579 QIAKRAIELA-EQRLSKD--GWPEYYDGKTG---------RYVGKQARKYQTWSIA-GYLVAKMMVE-NPSNLLMISLEE 644 (659)
Q Consensus 579 ~~A~~ll~~~-~~~l~~~--~~pE~fDG~~g---------~p~G~~ac~~QAWSaA-~~L~a~~lL~-~P~~~~~~~~~~ 644 (659)
+.|.+++... ...+..+ .++|.|++... .+.+...|. +|+++ ...+.++++| +|...|.-.+.-
T Consensus 574 d~A~~ll~~~w~~~v~~Gattl~E~~~~~~~~~~~~~~~g~~~~~s~~H--aW~ag~~~~l~~~ilGI~p~~pg~~~~~i 651 (739)
T 3cih_A 574 ETVMKEMKAYWGGMLKAGATSFWEKYNPEESGTQHLAMYGRPYGKSLCH--AWGASPIYLLGKYYLGVKPTKEGYKEFAV 651 (739)
T ss_dssp HHHHHHHHHHHHHHHTTTCSSCCSCCCTTCCGGGGGCBTTBTTCSCSSB--GGGCTHHHHHHHHTSCEEEEEGGGTEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCceeEEecccccCCcccccccccccCccccc--ccccchHHHHHHHHhccCcCCCCccEEEE
Confidence 9999988754 2333322 47899998531 111233344 89997 5566788899 988777644443
Q ss_pred hhcc
Q 035779 645 DKKI 648 (659)
Q Consensus 645 ~~~~ 648 (659)
.|.+
T Consensus 652 ~P~l 655 (739)
T 3cih_A 652 SPVL 655 (739)
T ss_dssp CCCC
T ss_pred EecC
Confidence 4443
No 9
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.85 E-value=6e-20 Score=210.43 Aligned_cols=315 Identities=14% Similarity=0.081 Sum_probs=210.9
Q ss_pred CCCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCC
Q 035779 226 LNYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGS 305 (659)
Q Consensus 226 ~nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~ 305 (659)
..|.-+|+||+.+++.+++.. |.++.++.+|..+++.|.. +|.+++.+.+ .| .|.+|.
T Consensus 335 ~dY~~~W~RD~~~~~~al~~~--G~~~~a~~~l~~l~~~q~~----------~G~~~~~~~~-----~G----~p~w~~- 392 (684)
T 1lf6_A 335 GGYHLVWSRDLYHVANAFIAA--GDVDSANRSLDYLAKVVKD----------NGMIPQNTWI-----SG----KPYWTG- 392 (684)
T ss_dssp CGGGSBCHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH----------HSSCCSCBCT-----TS----CBCCCC-
T ss_pred CCCEEEeccHHHHHHHHHHHc--CCHHHHHHHHHHHHhhcCC----------CCCcccceeC-----CC----CcccCC-
Confidence 368899999999999999987 9999999999999988753 4555554421 12 233432
Q ss_pred CCCCcCCCCcHHHHHHHHHHHHHHcCChhhhccHH-HHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchh
Q 035779 306 AIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPE-VQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIE 384 (659)
Q Consensus 306 aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p~-vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVE 384 (659)
.-.|.+.+++++++.| ..+| -++. ++++++|+.++.. .+|...|-+ +.|....
T Consensus 393 -----~Q~D~~g~~l~~~~~~-~~~g-----~~~~~v~~al~~i~~~~~-----------~~~~g~WE~----~~g~~~~ 446 (684)
T 1lf6_A 393 -----IQLDEQADPIILSYRL-KRYD-----LYDSLVKPLADFIIKIGP-----------KTGQERWEE----IGGYSPA 446 (684)
T ss_dssp -----CCHHHHHHHHHHHHHT-TCGG-----GTTTTHHHHHHHHHHHCS-----------SBSSCTTSS----CCBBCHH
T ss_pred -----ccccchHHHHHHHHHH-HHcC-----chHHHHHHHHHHHHHhCC-----------CCCcccccc----cCCcCHH
Confidence 1479999999998844 5566 3575 9999999998741 122233544 3577788
Q ss_pred hHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccc------cchhhhhhccccchhhhhhcccccCC
Q 035779 385 IQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDF------TQLNNIYRYKTEEYSHTAVNKFNVIP 458 (659)
Q Consensus 385 IQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~------~~l~~iyr~~te~y~~~A~nkfni~~ 458 (659)
+.++.|.||+++++|++.+ ++.+.++++++.+.+|++.|+++||.++ .++.+++...+
T Consensus 447 t~~~~~~aL~~~a~lA~~~-g~~~~a~~~~~~a~~i~~~i~~~~w~~~~~~g~~~~f~r~~~d~~--------------- 510 (684)
T 1lf6_A 447 TMAAEVAGLTCAAYIAEQN-KDYESAQKYQEKADNWQKLIDNLTYTENGPLGNGQYYIRIAGLSD--------------- 510 (684)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHHEESSCSSTTSCEECSCBSSSC---------------
T ss_pred HHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhccCCCcccccCCeeEEEeccCC---------------
Confidence 9999999999999999988 6677899999999999999999999865 22211110000
Q ss_pred CCCCccccccccCCCc-eEEeeecCC-cccccccccchhHHHhcCCCCHH--HHHHHHHHHHHHHHhhhc--CCCccccc
Q 035779 459 DSIPDWVFDFMPLRGG-YLIGNVSPA-RMDFRWFLVGNCIAILSSLATPA--QATAIMDLIEERWEDLIG--EMPLKISY 532 (659)
Q Consensus 459 ~~iP~wl~~w~~~~GG-Yl~g~v~P~-~~d~RifalGN~LALlsgll~~e--qa~~Vl~~V~~~~~~Llt--p~GLr~l~ 532 (659)
...|+ +.+.|-.+. ..+..+++ +.++++++|+++++ ++.+.++.|++ +|.. +.|. ..
T Consensus 511 -----------~~~~~~~~~~~~~~~~~~~~~lDa-s~l~~~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G~--~~ 573 (684)
T 1lf6_A 511 -----------PDADFMINIANGGGVYDQKEIVDP-SFLELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGP--SW 573 (684)
T ss_dssp -----------TTSCCEEEETTTTEEEEGGGCCCG-GGGHHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEE--EE
T ss_pred -----------CccccccccccccccCCCCCcEeH-HHhHHHhcCCcCCCCHHHHHHHHHHHH---HhccCCCCCC--eE
Confidence 00000 111110000 01111333 33356789998655 88888888854 4432 2220 00
Q ss_pred CCCCCCCceEeecCCCCCCCccc-cc--CCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhcC-CCCCccccCCCCCC
Q 035779 533 PALDGHEWRIVTGYDPKNTRWSY-HN--GGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSK-DGWPEYYDGKTGRY 608 (659)
Q Consensus 533 Pa~~d~~wr~~t~gdp~~rP~SY-HN--GgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~~-~~~pE~fDG~~g~p 608 (659)
.-|...+|+.+. +...| |+ |++||+..++++.++++.|+ +|.++++.+...... +.+||-||+.+|+|
T Consensus 574 ~RY~~d~y~~~~------~G~~f~~~g~g~~W~~~t~~~a~al~~~G~--~A~~~~~~l~~~a~~~gllpE~~~~~~g~~ 645 (684)
T 1lf6_A 574 YRYNHDGYGEPS------KTELYHGAGKGRLWPLLTGERGMYEIAAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLP 645 (684)
T ss_dssp CSSTTCCCSCSB------TTBCCSSSSCCCBBHHHHHHHHHHHHHTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCB
T ss_pred eccCCCCCCccc------CCCccccCCCCCchHHHHHHHHHHHHHhCh--HHHHHHHHHHHhcccCCccCeeecCCCCCC
Confidence 001111222111 11222 35 89999999999999999998 888999988766544 34799999989888
Q ss_pred CCCCCCccchHHHHHHHHHHHHh
Q 035779 609 VGKQARKYQTWSIAGYLVAKMMV 631 (659)
Q Consensus 609 ~G~~ac~~QAWSaA~~L~a~~lL 631 (659)
.|. |.|||||.++++.+...|
T Consensus 646 ~G~--a~PqaWSha~~i~~~~~l 666 (684)
T 1lf6_A 646 TDS--ASPLNWAHAEYVILFASN 666 (684)
T ss_dssp CSS--CSSCHHHHHHHHHHHHHH
T ss_pred CCC--CcchHHHHHHHHHHHHHH
Confidence 874 689999999999775444
No 10
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.82 E-value=1e-18 Score=207.96 Aligned_cols=312 Identities=15% Similarity=0.099 Sum_probs=206.9
Q ss_pred CCCCCchhhhHHHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCcceecccccccccccccCCCCCC
Q 035779 227 NYNQVFVRDFVPTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKETLVADFGGSA 306 (659)
Q Consensus 227 nY~~vfGRDt~IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~a 306 (659)
.|.-+|+||+.+++.+++.. |.++.++.+|..+++.|.. ++|.+++.+.+ .+ .+.|+
T Consensus 325 gYry~W~RDaa~t~~all~~--G~~e~A~~~l~~L~~~Q~~---------~~G~~~~~y~i-----~G----~~~w~--- 381 (1020)
T 1ulv_A 325 GYHAVWARDMYQSVTALLAA--GDEEAAARGVEWLFTYQQQ---------PDGHFPQTSRV-----DG----TIGQN--- 381 (1020)
T ss_dssp TTCSBCHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHTCC---------TTSCCCSCBCT-----TS----CBCCC---
T ss_pred CCceEccchHHHHHHHHHHc--CCHHHHHHHHHHHHHHhcC---------CCCCeeeEEec-----CC----CcCCC---
Confidence 38889999999999999987 9999999999999998852 36777776643 12 23333
Q ss_pred CCCcCCCCcHHHHHHHHHHHHHHcCChhhhccH-HHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhh
Q 035779 307 IGRVAPVDSGFWWIILLRSYTKCTRDYALAELP-EVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEI 385 (659)
Q Consensus 307 iG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p-~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEI 385 (659)
+ ...|.+.++++++++|.+ + |..+ ++ +++++++|+.++. + .++-..|-+ +.|+....
T Consensus 382 --~-~Q~D~~g~~l~~~~~~~~-~-d~~~--w~~~v~~al~~i~~~g--------~---~~~~~~WEe----~~g~~~~t 439 (1020)
T 1ulv_A 382 --G-IQLDETAFPILLANQIGR-T-DAGF--YRNELKPAADYLVAAG--------P---KTPQERWEE----TGGYSTST 439 (1020)
T ss_dssp --C-CBTHHHHHHHHHHHHHTC-C-CHHH--HHHTHHHHHHHHHHHC--------S---CBSBCTTSS----CCBEEHHH
T ss_pred --C-ccCccchHHHHHHHHHHh-c-CHHH--HHHHHHHHHHHHHHhC--------C---CCChhhhcc----cCCcCHHH
Confidence 2 257999999999999976 4 5332 46 8999999999874 1 122234544 46788899
Q ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccccc-----c-chhhhhhccccchhhhhhcccccCCC
Q 035779 386 QSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLDF-----T-QLNNIYRYKTEEYSHTAVNKFNVIPD 459 (659)
Q Consensus 386 QALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d~-----~-~l~~iyr~~te~y~~~A~nkfni~~~ 459 (659)
.++.|.||+++++|++.+ ++.+.++++++.+.+|++.|+++||.++ . .+.+++.. -++
T Consensus 440 ~~~~~~AL~~aa~lA~~~-G~~~~a~~w~~~Ad~i~~~i~~~~w~~~g~~~~~g~f~r~~~d---------g~~------ 503 (1020)
T 1ulv_A 440 LASQIAALAAAADIAGKN-GDAGSAAVYRATADEWQRSTEKWMFTTNGPVGDGKYYLRISAT---------GNP------ 503 (1020)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHTHHHHHEESSCSSTTSCEECSEESS---------SCT------
T ss_pred HHHHHHHHHHHHHHHHHc-CChhHHHHHHHHHHHHHHHHHHhCCCCcccccccCeeEEEecC---------CCc------
Confidence 999999999999999998 6677899999999999999999999865 1 21111100 000
Q ss_pred CCCccccccccCCCceEEeeecCCcccccccccchhHHHhcCCCCHH--HHHHHHHHHHHHHHhhh--cCCCcccccCCC
Q 035779 460 SIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAILSSLATPA--QATAIMDLIEERWEDLI--GEMPLKISYPAL 535 (659)
Q Consensus 460 ~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LALlsgll~~e--qa~~Vl~~V~~~~~~Ll--tp~GLr~l~Pa~ 535 (659)
+.. ..-+++.. +.. ..+. ..+++ +-++.+.+|+++++ +..+.++.|++ .|. ++.|
T Consensus 504 -~~~-~~~~~~n~-~~~---~~~~---~~lDa-s~l~l~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G-------- 562 (1020)
T 1ulv_A 504 -NDG-ATRDWGNG-AGV---HPEN---AVLDG-GFLEFVRLGVKAPADPYVADSLAETDA---SISQETPGG-------- 562 (1020)
T ss_dssp -TSC-CEEECSTT-CCE---EEGG---GCCBG-GGGHHHHTTSSCTTCHHHHHHHHHHHH---HHEEEETTE--------
T ss_pred -ccc-cccccccc-ccc---CCCC---CeeeH-HHHHHHHhCCCCCCcHHHHHHHHHHHH---HhcccCCCC--------
Confidence 000 00011100 000 0011 11221 11223469996654 66767777753 343 1122
Q ss_pred CCCCceEeecCCCCCCCcccc---c---------CCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHhcC-CCCCcccc
Q 035779 536 DGHEWRIVTGYDPKNTRWSYH---N---------GGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRLSK-DGWPEYYD 602 (659)
Q Consensus 536 ~d~~wr~~t~gdp~~rP~SYH---N---------GgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l~~-~~~pE~fD 602 (659)
| +-.+|++.+|| | |++||....+++.++++.|+ +|.++++.+..+... +.+||.||
T Consensus 563 ----~-----~~~RY~~D~Y~~~~dG~~~~~~g~g~~W~l~T~wlae~~~~~G~--~A~~~~~~l~~~a~~~GllpEq~~ 631 (1020)
T 1ulv_A 563 ----R-----MWHRYTYDGYGEKADGSPWDGTGIGRLWPLLSGERGEYALANGQ--DALPYLETMHSAANAGYMIPEQVW 631 (1020)
T ss_dssp ----E-----EECSBTTCCCSCCTTSCCCSSCCCCCBCTHHHHHHHHHHHHTTC--CCHHHHHHHHHTSCTTCCCCSCBB
T ss_pred ----c-----eeecCCccccccccCCCcccCCCCCChHHHHHHHHHHHHHHhhH--HHHHHHHHHHHhccccCCcceeec
Confidence 1 11234445555 3 78999999999999999997 788899888766544 35899998
Q ss_pred C-CC----CCCCCCC--CCccchHHHHHHHHHHHHh
Q 035779 603 G-KT----GRYVGKQ--ARKYQTWSIAGYLVAKMMV 631 (659)
Q Consensus 603 G-~~----g~p~G~~--ac~~QAWSaA~~L~a~~lL 631 (659)
. .. +-+.|.+ +|.+||||.+++|.+...+
T Consensus 632 ~g~~~~~~~~~tG~p~~g~~PqaWSha~~I~~~~~l 667 (1020)
T 1ulv_A 632 DRDEPTSYGHELGRSTGSASPLSWAMAQYVRLAAGV 667 (1020)
T ss_dssp CCSSCCSSCCCBTSBCSSCBSCHHHHHHHHHHHHHH
T ss_pred ccccccccCCcCCccccCCcHHHHHHHHHHHHHHHH
Confidence 5 11 1133432 5899999999988665443
No 11
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=99.46 E-value=7.9e-12 Score=138.68 Aligned_cols=331 Identities=17% Similarity=0.156 Sum_probs=202.1
Q ss_pred cCccceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCC--------HHHHHHHHHHHHhhccccccccccccCCCc
Q 035779 209 KGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAE--------PEIVKNFLLKTLHLQGWEKRIDNFTLGEGV 280 (659)
Q Consensus 209 ~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~--------peiar~~L~~~a~lQ~~~~~ld~~~~~~Gl 280 (659)
.+.+.|.|.|.. +...+.|.-+|.||+.+++.+++-. |. .+.++.++...+.+|... ...|-
T Consensus 45 ~~~~~GaiIASp-ttsnpDYrY~W~RDaa~t~~aL~~~--g~~~~~~~~l~~~a~~y~~~~~~lq~~~-------~~~G~ 114 (492)
T 2fba_A 45 NNGVPGTVIASP-STSNPDYYYQWTRDSAITFLTVLSE--LEDNNFNTTLAKAVEYYINTSYNLQRTS-------NPSGS 114 (492)
T ss_dssp TTSCTTCBCSCS-CBSSSBCCSEEHHHHHHHHHHHHHH--HHHTTTCHHHHHHHHHHHHHHHHHHTSC-------BTTBC
T ss_pred CCCCCCeEEEeC-CCCCCCCeEEccchHHHHHHHHHHh--CcccccccchHHHHHHHHHHHHHHhccc-------CCCCC
Confidence 455667765532 1123679999999999999999876 76 889999988655566432 12454
Q ss_pred cCC-cceeccccc---ccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhh---------------c--c-
Q 035779 281 MPA-SFKVLFNSH---QQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALA---------------E--L- 338 (659)
Q Consensus 281 iP~-~fki~h~p~---~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl---------------~--~- 338 (659)
++. ...++-+|. +|+ .....+| + .-.|.+-+.++++..|.++..+.... + +
T Consensus 115 ~~~~~~~glgep~y~vdG~-~~~~~w~-----~-~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (492)
T 2fba_A 115 FDDENHKGLGEPKFNTDGS-AYTGAWG-----R-PQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYK 187 (492)
T ss_dssp TTSGGGGGGGCCEECTTSC-BCCSCCS-----C-CBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHH
T ss_pred cCcccccccCceeeccCCC-cCCcccC-----C-ccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHH
Confidence 442 121221111 111 0011122 2 23699999999999998776444322 2 2
Q ss_pred HHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHH
Q 035779 339 PEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRIT 418 (659)
Q Consensus 339 p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~ 418 (659)
+.++++++++.++-...+|+ .|=-+.|+-....+.-+.||.+++.|++.. ++.+.++++.+.+.
T Consensus 188 ~~i~~~l~~v~~~w~~pd~d---------------lWEer~g~~~~T~~~~~~AL~~aa~lA~~~-g~~~~a~~w~~~ad 251 (492)
T 2fba_A 188 NIIKPDLEYVIGYWDSTGFD---------------LWEENQGRHFFTSLVQQKALAYAVDIAKSF-DDGDFANTLSSTAS 251 (492)
T ss_dssp HTHHHHHHHHHHHTTSCEEC---------------TTSCCEECCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCC---------------CcCccCCCChHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 67888888888765432222 122345677788999999999999999988 56777888888888
Q ss_pred HHHHHHHHh---ccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeee------cCCcccccc
Q 035779 419 ALSYHIQKY---YWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNV------SPARMDFRW 489 (659)
Q Consensus 419 ~Lk~~~~~~---FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v------~P~~~d~Ri 489 (659)
.++..|.++ ||.+.+ ||+.... ....+|.-+
T Consensus 252 ~i~~~I~~~~~~~w~~~~----------------------------------------~~f~~~~~~~~~~~~~~lDas~ 291 (492)
T 2fba_A 252 TLESYLSGSDGGFVNTDV----------------------------------------NHIVENPDLLQQNSRQGLDSAT 291 (492)
T ss_dssp HHHHHHHSTTTCCEETTT----------------------------------------TEECSSHHHHHTTSCCSCCTHH
T ss_pred HHHHHHHHhhhcCCCCCC----------------------------------------CEEEEeccccccCCCCcccHHH
Confidence 888888887 885432 2222211 111233111
Q ss_pred cccchhHHH-hcC-------CC--CHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccc---
Q 035779 490 FLVGNCIAI-LSS-------LA--TPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYH--- 556 (659)
Q Consensus 490 falGN~LAL-lsg-------ll--~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYH--- 556 (659)
. ++++ -++ ++ +..+...-++.|++ +|...||+.-=-+ .... -.||..+ .|.
T Consensus 292 L----l~~~~~f~~~~~~~~~~~p~Dpr~l~Tl~ai~~---~L~~~~pin~~~~--~g~~-v~RY~~D------~y~g~~ 355 (492)
T 2fba_A 292 Y----IGPLLTHDIGESSSTPFDVDNEYVLQSYYLLLE---DNKDRYSVNSAYS--AGAA-IGRYPED------VYNGDG 355 (492)
T ss_dssp H----HHHHHHSCTTSCCCCSCCTTCHHHHHHHHHHHH---HHHHHCGGGTTCS--SCCC-CCSCTTC------CBCSSS
T ss_pred H----HHHHhccccccccCCccCCCCHHHHHHHHHHHH---HHhcccCccccCc--ceeE-EEeCCCC------CCCCCC
Confidence 1 1111 233 23 34466666666643 5544443310000 0000 1122211 233
Q ss_pred --cCCcchhhHHHHHHH----H----HHcC-------------------------C----------------------hH
Q 035779 557 --NGGSWPVLLWLLTAA----S----IKTG-------------------------R----------------------PQ 579 (659)
Q Consensus 557 --NGgVWP~llg~~~~A----l----~k~G-------------------------~----------------------~~ 579 (659)
.|+.|+-...+++.+ + .+.| + .+
T Consensus 356 ~~~g~pw~lcT~w~ae~ly~al~~~~~~~g~~~i~~~~~~f~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~ 435 (492)
T 2fba_A 356 SSEGNPWFLATAYAAQVPYKLAYDAKSASNDITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVT 435 (492)
T ss_dssp BSSCCCBHHHHHHHHHHHHHHHHHHHHHTCCEEEEGGGHHHHHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHhcCceecchhhHHHHHhhhhhhccccccccccccceeccCchhHHHHHHHHHH
Confidence 388999999988883 3 2444 4 56
Q ss_pred HHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHHHHHh
Q 035779 580 IAKRAIELAEQRLSKDG-WPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMV 631 (659)
Q Consensus 580 ~A~~ll~~~~~~l~~~~-~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL 631 (659)
.|..+++.+..+....+ +||=||..+|++.|. .+||||-+++|.+...+
T Consensus 436 ~A~~~l~~~~~~~~~~GllsEq~d~~tG~~~ga---~PltwSha~li~aa~~~ 485 (492)
T 2fba_A 436 FGDSFLQVILDHINDDGSLNEQLNRYTGYSTGA---YSLTWSSGALLEAIRLR 485 (492)
T ss_dssp HHHHHHHHHHHHSCTTSCCCSEECTTTCCEESS---TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCccccCCCCCCCCCc---cchHHHHHHHHHHHHHH
Confidence 88889988877766555 799999888988874 79999999999776554
No 12
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=99.40 E-value=7.3e-11 Score=130.36 Aligned_cols=334 Identities=15% Similarity=0.149 Sum_probs=199.5
Q ss_pred HHHHHHhhhcc----ccCccceeecc-CCCCcccCCCCCCchhhhHHHHHHHH---hcCCCCHHHHHHHHHHHHh---hc
Q 035779 197 ALERLKKSYVY----FKGKPVGTFAA-MDPNAEALNYNQVFVRDFVPTALACL---MIEPAEPEIVKNFLLKTLH---LQ 265 (659)
Q Consensus 197 a~~~l~~s~v~----~~~~~~Gt~Aa-~d~~~~~~nY~~vfGRDt~IS~lglL---l~~~g~peiar~~L~~~a~---lQ 265 (659)
|++.+-++|-- ..|.+.|.|.| ... ..+.|.-+|.||+.+++.+++ .. |..+.++.++..+.. +|
T Consensus 14 ~~~~~l~ni~~~G~~~~~~~tGaiIASptt--snpDYrY~W~RDaa~t~~aL~~~~~~--G~~~~a~~~~~~l~~~~~lQ 89 (472)
T 1gai_A 14 ARTAILNNIGADGAWVSGADSGIVVASPST--DNPDYFYTWTRDSGLVIKTLVDLFRN--GDTDLLSTIEHYISSQAIIQ 89 (472)
T ss_dssp HHHHHHHTBTTTCTTCTTCCTTCBCSCSCB--SSSBCCSEEHHHHHHHHHHHHHHHHT--TCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcccCCCCCCceEEeeCCC--CCCCCeEEchhhHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHhh
Confidence 56666666621 13445565544 322 235799999999999999998 65 888777777666554 55
Q ss_pred cccccccccccCCCccC------CcceecccccccccccccCCCCCCCCCcCCCCc-----HHHHHHHHHHHHHHcCChh
Q 035779 266 GWEKRIDNFTLGEGVMP------ASFKVLFNSHQQKETLVADFGGSAIGRVAPVDS-----GFWWIILLRSYTKCTRDYA 334 (659)
Q Consensus 266 ~~~~~ld~~~~~~GliP------~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDa-----tLWfIill~~Y~~~TGD~s 334 (659)
... ...|-++ ..|.| +|+ ....++| + .-.|. .-.++.+.+ +..+|+..
T Consensus 90 ~~~-------~~~G~l~~~glgE~~y~v-----dG~-~~~~~w~-----~-~Q~D~~g~ra~~~~~~~~~--l~~~g~~~ 148 (472)
T 1gai_A 90 GVS-------NPSGDLSSGGLGEPKFNV-----DET-AYTGSWG-----R-PQRDGPALRATAMIGFGQW--LLDNGYTS 148 (472)
T ss_dssp HCC-------BTTBCTTTTGGGCCEECT-----TSC-BCCSCCS-----C-CCTHHHHHHHHHHHHHHHH--HHHTTCHH
T ss_pred ccc-------CCCCccccCCCCCceEcc-----CCC-ccCCcCC-----C-ccccccchhHHHHHHHHHH--HHHcCCcc
Confidence 321 1234444 33321 121 0111222 1 12577 334455554 67789987
Q ss_pred hhc---cHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHH
Q 035779 335 LAE---LPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIE 411 (659)
Q Consensus 335 fl~---~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~ 411 (659)
+++ ++.++++++++.++-...+++ .|=-|.|+-....+.-+.||.++++|++.++.. ++
T Consensus 149 ~~~~~~w~~i~~~l~~v~~~w~~pd~d---------------lWEer~g~~~~T~~~~~~AL~~aa~lA~~~g~~---~~ 210 (472)
T 1gai_A 149 AATEIVWPLVRNDLSYVAQYWNQTGYD---------------LWEEVNGSSFFTIAVQHRALVEGSAFATAVGSS---CS 210 (472)
T ss_dssp HHHHTHHHHHHHHHHHHHHHTTSCEEC---------------TTSCCEEEEHHHHHHHHHHHHHHHHHHHHTTCC---CH
T ss_pred ccchhHHHHHHHHHHHHHHhcCCCCCC---------------CCcccCCCCHHHHHHHHHHHHHHHHHHHHcCCc---HH
Confidence 655 588899999998766432222 122345677788899999999999999988543 56
Q ss_pred HHHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccc
Q 035779 412 RIDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFL 491 (659)
Q Consensus 412 ~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~Rifa 491 (659)
++++.+..++..| ++||. ..+.+. |. ++ +...+|.
T Consensus 211 ~w~~~ad~I~~~i-~~~w~--g~f~~~------------------------------------~~-~~-~~~~lDa---- 245 (472)
T 1gai_A 211 WCDSQAPQILCYL-QSFWT--GSYILA------------------------------------NF-DS-SRSGKDT---- 245 (472)
T ss_dssp HHHHHHHHHHHHH-GGGBC--SSSBCS------------------------------------EE-SC-CSCCCCT----
T ss_pred HHHHHHHHHHHHH-HhhcC--CceEEe------------------------------------ec-CC-CCCCcCH----
Confidence 7777778888888 88883 111000 00 00 1112231
Q ss_pred cchhHHHhcCC------------CCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCC
Q 035779 492 VGNCIAILSSL------------ATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGG 559 (659)
Q Consensus 492 lGN~LALlsgl------------l~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGg 559 (659)
..+++.+.+. .+..+...-++.|++ +|..-|++..=.| .+-++ +--+|..-.|..|+
T Consensus 246 -s~LL~~~~~f~p~~~~~~~~~~p~Dpr~l~Tl~ai~~---~L~~~y~i~~~~~----~g~g~---~v~RY~~D~y~gg~ 314 (472)
T 1gai_A 246 -NTLLGSIHTFDPEAGCDDSTFQPCSPRALANHKEVVD---SFRSIYTLNDGLS----DSEAV---AVGRYPEDSYYNGN 314 (472)
T ss_dssp -HHHHHHHTTCCTTCCSCTTTTCTTSHHHHHHHHHHHH---TTTTTCGGGTTCC----TTSCC---CCCSCTTCCGGGSC
T ss_pred -HHHHhhhccCCccccccccCCCCCCHHHHHHHHHHHH---HHHHhcCcCCCCc----Ccccc---eEEeCCCCCCCCCC
Confidence 1122333332 144566666666643 4442233221000 01000 11223333566799
Q ss_pred cchhhHHHHHHHHHH-----------------------------cC----------ChHH-----HHHHHHHHHHHhcCC
Q 035779 560 SWPVLLWLLTAASIK-----------------------------TG----------RPQI-----AKRAIELAEQRLSKD 595 (659)
Q Consensus 560 VWP~llg~~~~Al~k-----------------------------~G----------~~~~-----A~~ll~~~~~~l~~~ 595 (659)
.|.--..+++.++.+ .| +.++ |..+++.+..+....
T Consensus 315 pw~lcT~wlae~l~~a~~~~~~~~~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~e~~~~~~~~~ 394 (472)
T 1gai_A 315 PWFLCTLAAAEQLYDALYQWDKQGSLEITDVSLDFFKALYSGAATGTYSSSSSTYSSIVSAVKTFADGFVSIVETHAASN 394 (472)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHCTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred cHHHHHHHHHHHHHHHHHHhhccCceeecchhHHHHHhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999988764 45 4445 888888887766655
Q ss_pred C-CCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhc
Q 035779 596 G-WPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVE 632 (659)
Q Consensus 596 ~-~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~ 632 (659)
+ +||=||..+|++.| +.+||||-+++|.+...+.
T Consensus 395 GllsEq~d~~tG~~~g---n~PlawSha~lI~aa~~l~ 429 (472)
T 1gai_A 395 GSLSEQFDKSDGDELS---ARDLTWSYAALLTANNRRN 429 (472)
T ss_dssp CCCCSEECTTTCCEES---SSSCHHHHHHHHHHHHHHT
T ss_pred CCcccccCCCCCCCCC---ccchHHHHHHHHHHHHHHh
Confidence 5 79999988888877 4799999999998877764
No 13
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=99.34 E-value=2.8e-10 Score=129.01 Aligned_cols=342 Identities=15% Similarity=0.133 Sum_probs=199.3
Q ss_pred HHHHHHhhhcc----ccCccceeeccC-CCCcccCCCCCCchhhhHHHHHHHH----hcCCCCHHHHHHHHHHHH---hh
Q 035779 197 ALERLKKSYVY----FKGKPVGTFAAM-DPNAEALNYNQVFVRDFVPTALACL----MIEPAEPEIVKNFLLKTL---HL 264 (659)
Q Consensus 197 a~~~l~~s~v~----~~~~~~Gt~Aa~-d~~~~~~nY~~vfGRDt~IS~lglL----l~~~g~peiar~~L~~~a---~l 264 (659)
|++.+-++|-- ..|.+.|.|.|. .. ..+.|.-+|.||+.+++.+++ .. |..+.++.++..+. .+
T Consensus 13 ~~~~~l~ni~~~g~~~~~~~tGaiIAsptt--s~pDYrY~W~RDaa~t~~aL~~~~~~~--G~~~~a~~~~~~l~~~~~l 88 (599)
T 2vn4_A 13 ALNNLLCNVGPDGCRAFGTSAGAVIASPST--IDPDYYYMWTRDSALVFKNLIDRFTET--YDAGLQRRIEQYITAQVTL 88 (599)
T ss_dssp HHHHHHTTBTTTCTTSTTSCTTCBCSCSCC--SSSCCCSEEHHHHHHHHHHHHHHHHHS--BCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcccCCCCCCceEEEECCC--CCCCCeEEchhhHHHHHHHHHHHHHhC--CCHHHHHHHHHHHhcccce
Confidence 56656666521 134455655543 22 236899999999999999988 76 99999999888776 36
Q ss_pred ccccccccccccCCCccCCcceecccc---cccccccccCCCCCCCCCcCCCCc-----HHHHHHHHHHHHHHcCChhhh
Q 035779 265 QGWEKRIDNFTLGEGVMPASFKVLFNS---HQQKETLVADFGGSAIGRVAPVDS-----GFWWIILLRSYTKCTRDYALA 336 (659)
Q Consensus 265 Q~~~~~ld~~~~~~GliP~~fki~h~p---~~~~e~~~~dfG~~aiG~v~sVDa-----tLWfIill~~Y~~~TGD~sfl 336 (659)
|..- ...|-.|.. +.+.+| ++|. + |. .+.|+ .-.|. +-..+.+++ +..+|+.+++
T Consensus 89 Q~~y-------~~~G~~~~~-~~l~E~~~~ldG~----~-~~-~~w~~-~Q~D~~glr~~~~~~~~~~--~~~~g~~~~~ 151 (599)
T 2vn4_A 89 QGLS-------NPSGSLADG-SGLGEPKFELTLK----P-FT-GNWGR-PQRDGPALRAIALIGYSKW--LINNNYQSTV 151 (599)
T ss_dssp HHCC-------BTTBCSTTS-GGGGCCEECTTSC----B-CC-SCCSC-CCTHHHHHHHHHHHHHHHH--HHHTTCHHHH
T ss_pred eeee-------CCCCCcccc-cCcCceEEecCCc----c-cc-CcCCC-eeccccchhHHHHHHHHHH--HHHhCCcccc
Confidence 6432 124444321 111111 0111 0 10 01222 13466 334455554 5678998876
Q ss_pred c---cHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHH
Q 035779 337 E---LPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERI 413 (659)
Q Consensus 337 ~---~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l 413 (659)
+ ++.++++++++.++-...+++ .|=-+.|+-....+.-+.||.++++|++.++.. +.++
T Consensus 152 ~~~~w~~v~~~l~~v~~~w~~~d~d---------------lWEer~g~~~~T~~~~~~aL~~aa~lA~~~g~~---~~~w 213 (599)
T 2vn4_A 152 SNVIWPIVRNDLNYVAQYWNQTGFD---------------LWEEVNGSSFFTVANQHRALVEGATLAATLGQS---GSAY 213 (599)
T ss_dssp HHHTHHHHHHHHHHHHHHTTSCEEC---------------TTSCCEEEEHHHHHHHHHHHHHHHHHHHHHTCC---CHHH
T ss_pred cHHHHHHHHHHHHHHHHhCCCCCCC---------------eeeecCCcchHHHHHHHHHHHHHHHHHHHcCCC---HHHH
Confidence 5 688999999998876432222 122345666778899999999999999988543 5667
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccc
Q 035779 414 DKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVG 493 (659)
Q Consensus 414 ~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalG 493 (659)
++.+.+++..| ++||.+...+.+. |..++-+...+| + .
T Consensus 214 ~~~ad~i~~~i-~~~w~~~g~f~~~------------------------------------~~~~~~~~~~lD----a-s 251 (599)
T 2vn4_A 214 SSVAPQVLCFL-QRFWVSSGGYVDS------------------------------------NINTNEGRTGKD----V-N 251 (599)
T ss_dssp HHHHHHHHHHH-GGGEETTTTEECS------------------------------------EESSCCCCCCCB----T-H
T ss_pred HHHHHHHHHHH-HhhcCCCCCEEEE------------------------------------ecCccCCCCCcC----H-H
Confidence 77777788888 8898643221100 000000111233 2 1
Q ss_pred hhHHHhcCC------------CCHHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcc
Q 035779 494 NCIAILSSL------------ATPAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSW 561 (659)
Q Consensus 494 N~LALlsgl------------l~~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVW 561 (659)
.+|+.+.+. .+..+...-++.|++ +|..-|++..=.| .+-++ +--+|..-.|..|+.|
T Consensus 252 ~LL~~~~~f~~~~~~~~~~~~p~dpr~l~Tl~ai~~---~L~~~y~i~~g~~----~g~~~---~v~RY~~D~y~Gg~pw 321 (599)
T 2vn4_A 252 SVLTSIHTFDPNLGCDAGTFQPCSDKALSNLKVVVD---SFRSIYGVNKGIP----AGAAV---AIGRYAEDVYYNGNPW 321 (599)
T ss_dssp HHHHHHHSCCGGGTTCTTTTCTTSHHHHHHHHHHHH---HHHTTCGGGTTCC----TTSCC---CCCSBTTCCGGGCCCB
T ss_pred HHhhhhccCCccccccccCCCCCCHHHHHHHHHHHH---HHHhhcCcCCCCc----CCcee---EEEeCCCCCCCCCCcH
Confidence 122332332 144566666666653 5543333221000 01000 1112222345569999
Q ss_pred hhhHHHHHHHHHH-----------------------------cCCh----------H-----HHHHHHHHHHHHhcCCC-
Q 035779 562 PVLLWLLTAASIK-----------------------------TGRP----------Q-----IAKRAIELAEQRLSKDG- 596 (659)
Q Consensus 562 P~llg~~~~Al~k-----------------------------~G~~----------~-----~A~~ll~~~~~~l~~~~- 596 (659)
.--..+++.++.+ .|+. + .|..+++.++.+....+
T Consensus 322 ~lcT~w~ae~l~~a~~~~~~~g~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~a~~~Gl 401 (599)
T 2vn4_A 322 YLATFAAAEQLYDAIYVWKKTGSITVTATSLAFFQELVPGVTAGTYSSSSSTFTNIINAVSTYADGFLSEAAKYVPADGS 401 (599)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTEEEECTTTHHHHHHHSTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCC
T ss_pred HHHHHHHHHHHHHHHHhhhccCceeeccchhHHHhhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9998888887653 3422 2 37777777766555444
Q ss_pred CCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhc
Q 035779 597 WPEYYDGKTGRYVGKQARKYQTWSIAGYLVAKMMVE 632 (659)
Q Consensus 597 ~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~~lL~ 632 (659)
+||=||..+|++.| +.+||||-+++|.+...+.
T Consensus 402 lsEqvd~~~G~~~g---n~PlawSha~lI~a~~~~~ 434 (599)
T 2vn4_A 402 LAEQFDRNSGTPLS---ALHLTWSYASFLTATARRA 434 (599)
T ss_dssp CCSEECTTTCCEES---SSSCHHHHHHHHHHHHHHT
T ss_pred cccccCCCCCccCC---cchHHHHHHHHHHHHHHHh
Confidence 79999988888876 4799999999997766653
No 14
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.20 E-value=5.1e-10 Score=123.22 Aligned_cols=345 Identities=17% Similarity=0.144 Sum_probs=204.6
Q ss_pred ccccCccceeeccCCCCcccCCCCCCchhhhHHHHHHHH-hcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCCc
Q 035779 206 VYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACL-MIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPAS 284 (659)
Q Consensus 206 v~~~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglL-l~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~~ 284 (659)
|.+.|.|.=+|...|= ...|-||+.-=+.-.+ +. ..+|++ +..++-+.+.|.+--.+|+|. +.+-|..
T Consensus 88 v~~~~~~~tfViTGDI-------~AmWLRDS~~Q~~pYl~l~-~~d~~l-~~li~G~i~rq~~~i~~dPYa--NAF~~~~ 156 (489)
T 2p0v_A 88 VHFDGKEDTFVYTGDI-------HAMWLRDSGAQVWPYVQLA-NKDPEL-KKMLAGVINRQFKCINIDPYA--NAFNMNS 156 (489)
T ss_dssp EEECSSSCEEECCBSS-------SSEEHHHHHHHSGGGGGGG-GGCHHH-HHHHHHHHHHHHHHHHHCTTC--SEECSSS
T ss_pred eeeCCCCCEEEEeCCc-------cchhhcccHHHHHHHHHHh-ccCHHH-HHHHHHHHHHHHHHhccCccc--cccCCCC
Confidence 4557888778877761 2689999876443322 22 246766 777777778888766677776 2211110
Q ss_pred ceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhcc---HHHHHHHHHHHHhccCCC---CC
Q 035779 285 FKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAEL---PEVQRGMKLILNLCLSDG---FD 358 (659)
Q Consensus 285 fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~---p~vq~aL~~Il~~~~~dG---f~ 358 (659)
-.-.|.. ......|.-.+. =..+|+.-.+|.+++.|++.|||.+|+.. ..++.+++++.+.-..++ --
T Consensus 157 ~~~~~~~--d~t~~~P~v~E~----KyElDSla~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y 230 (489)
T 2p0v_A 157 EGGEWMS--DLTDMKPELHER----KWEIDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPY 230 (489)
T ss_dssp CCCGGGG--SSSCCCTTEEEC----CCCHHHHHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCSSCSSCSC
T ss_pred CCCCCCC--CCCCCCcccccc----cchhhhhHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcccCCCCCc
Confidence 0000110 001111211111 12689999999999999999999999982 455555666555222222 11
Q ss_pred cC------------------C----cccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHH
Q 035779 359 TF------------------P----TLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKR 416 (659)
Q Consensus 359 ~~------------------p----~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~r 416 (659)
.+ | +|.+..-.-.-|. -++|+-+--|++.|.+|+.+++|++.++++.++++++++.
T Consensus 231 ~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa--~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~~~~~l 308 (489)
T 2p0v_A 231 RFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDA--TTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTAL 308 (489)
T ss_dssp CCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCB--CSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred eEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcc--hhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 11 1 1111111111222 4578889999999999999999999887678889999999
Q ss_pred HHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhH
Q 035779 417 ITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCI 496 (659)
Q Consensus 417 a~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~L 496 (659)
+.++++-|.++.|++...+..+|.|....| |+++. ||- -..+++|
T Consensus 309 A~eI~~gI~~~gv~~~p~~G~ifAyEVDG~--------------------------G~~~~-------mDD--anvpSLL 353 (489)
T 2p0v_A 309 ADEVEKALKKYAVCNHPKYGKIYAFEVDGF--------------------------GNQLL-------MDD--ANVPSLI 353 (489)
T ss_dssp HHHHHHHHHHHSEEEETTTEEEECSEECSS--------------------------SCEEC-------CCC--SSSSCST
T ss_pred HHHHHHHHHHhCEecCCCCccEEEEEecCC--------------------------CCccc-------CCC--CCccHHH
Confidence 999999999999987644434554432222 22211 110 0124445
Q ss_pred HH-hcCCCC--HHHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHH
Q 035779 497 AI-LSSLAT--PAQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASI 573 (659)
Q Consensus 497 AL-lsgll~--~eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~ 573 (659)
++ .+|.++ ++.-+.-.+.|++ ++. ||..+ .+ ...++ |.| |-|--.||....++.| +
T Consensus 354 slPylG~~~~dDpiy~nTr~~IlS---~~N-Pyy~~--G~-----~~~GI--Gsp-------H~~~~~~Wpmsll~~a-l 412 (489)
T 2p0v_A 354 ALPYLGDVKVTDPIYQNTRKFVWS---EDN-PYFFK--GS-----AGEGI--GGP-------HIGYDMIWPMSIMMKA-F 412 (489)
T ss_dssp THHHHTSSCTTCHHHHHHHHHHTS---TTS-TTEEE--CS-----SCEEE--CCT-------TTCTTEECHHHHHHHH-H
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHh---hcC-Ccccc--cc-----cccCC--CCC-------CCCCCchHHHHHHHHH-H
Confidence 54 467655 4466666666632 332 33221 11 00111 222 4444445556666666 5
Q ss_pred HcCChHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHHH
Q 035779 574 KTGRPQIAKRAIELAEQRLSKDG-WPEYYDGKTGRYVGKQARKYQTWSIAGYLVAK 628 (659)
Q Consensus 574 k~G~~~~A~~ll~~~~~~l~~~~-~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a~ 628 (659)
..++.+++.+.|+.+.+.-..-+ ++|=||..++.+. ++.+.+||-+.|.-+.
T Consensus 413 ts~d~~E~~~~L~~l~~t~~gtGLmhEs~d~~~~~~~---TR~wFaWanslF~e~i 465 (489)
T 2p0v_A 413 TSQNDAEIKTCIKMLMDTDAGTGFMHESFNKNDPKNF---TRAWFAWQNTLFGELI 465 (489)
T ss_dssp TCCCHHHHHHHHHHHHHTSTTSCSCCSEEETTEEEEE---ECSCBHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHhhCCCCCeeeeeECCCCCCcC---CCcccHHHHHHHHHHH
Confidence 57889999999998765444344 6999998775433 3579999999877443
No 15
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=98.92 E-value=2.9e-08 Score=107.71 Aligned_cols=341 Identities=15% Similarity=0.056 Sum_probs=204.3
Q ss_pred hccccCccceeeccCCCCcccCCCCCCchhhhH--HHHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCcc-
Q 035779 205 YVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFV--PTALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVM- 281 (659)
Q Consensus 205 ~v~~~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~--IS~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~Gli- 281 (659)
-|.+++.+.-+|...|= ...|-||+. +....-|+. .++++ ++.++-+.+.|.+--.+|+|. +.+-
T Consensus 40 tv~~~~~~~tFviTGDI-------~AmWLRDS~~Ql~pY~~l~~--~d~~l-~~li~G~I~rQ~~~i~~dPYa--NAF~~ 107 (426)
T 3qry_B 40 TVEILEDGSTFVLTGDI-------PAMWLRDSTAQLRPYLHVAK--RDALL-RQTIAGLVKRQMTLVLKDPYA--NSFNI 107 (426)
T ss_dssp SEEECTTSCEEECSSSS-------SEEEHHHHHHHHGGGHHHHT--TCHHH-HHHHHHHHHHHHHHHHHCTTC--SEEES
T ss_pred eeEecCCCCEEEEeCCC-------cchhhccCHHHHHHhHHHhc--cCHHH-HHHHHHHHHHHHHHhccCccc--ccCCC
Confidence 36778888888888862 268999988 444444554 67776 777778888888765567776 1111
Q ss_pred -CCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccCC-----
Q 035779 282 -PASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSD----- 355 (659)
Q Consensus 282 -P~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~d----- 355 (659)
|+.-.. +.. -...+...-.-+=..+|+--.+|.+.+.|++.|||.+|+.. ...+|++.|++.....
T Consensus 108 ~~~~~~~-~~~------d~t~~~~~v~E~KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~eq~~~~ 179 (426)
T 3qry_B 108 EENWKGH-HET------DHTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDE-IFVAATKEILHLWTVEQDHKN 179 (426)
T ss_dssp SSCCCSS-TTT------EESCCCTTEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHHHTTSGGG
T ss_pred CCCCCCc-cCC------CCCCCCCeeEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHHHHHHHHHHHHHhccCC
Confidence 110000 000 00011100001113689999999999999999999999984 6788888887643211
Q ss_pred ---CCCc-----CCcccccC-------CCCcccc---c---CCCCCCchhhHHHHHHHHHHHHHhccc--CCCChHHHHH
Q 035779 356 ---GFDT-----FPTLLCAD-------GCSMIDR---R---MGIYGYPIEIQSLFYFALRCARQMLKP--ERDGKELIER 412 (659)
Q Consensus 356 ---Gf~~-----~p~Ll~~D-------g~~~mD~---~---m~r~G~PVEIQALwY~ALr~aaeLa~~--~~~~~~~a~~ 412 (659)
.|.. ..+| ..+ ...++.+ + --++|+-|--|+++..+|+.+++|+.. ..++.+++++
T Consensus 180 s~Y~f~R~t~~~tdtl-~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~d~~la~~ 258 (426)
T 3qry_B 180 SPYRFVRDTDRKEDTL-VNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADSQSVIAD 258 (426)
T ss_dssp CCCCCEECCSCGGGSC-HHHHTCSCCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHH
T ss_pred CCceeeecCCCCCccc-cCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccCcHHHHHH
Confidence 1110 0001 000 0111110 0 135678888999999999999999983 4466778999
Q ss_pred HHHHHHHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCccccccccc
Q 035779 413 IDKRITALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLV 492 (659)
Q Consensus 413 l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~Rifal 492 (659)
+++.+.++++-|.+|..++...+-.+|.|....||. ++. ||- -+.
T Consensus 259 ~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~Gs--------------------------~~l-------mDD--aNv 303 (426)
T 3qry_B 259 AKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLGN--------------------------ASI-------MDD--PNV 303 (426)
T ss_dssp HHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSSC--------------------------BCC-------CCC--SSS
T ss_pred HHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCC--------------------------ccc-------cCC--CCc
Confidence 999999999999999998776655566654433321 110 110 123
Q ss_pred chhHHH-hcCCCCH--HHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHH
Q 035779 493 GNCIAI-LSSLATP--AQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLT 569 (659)
Q Consensus 493 GN~LAL-lsgll~~--eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~ 569 (659)
+++|++ ..|.++. +.-+.-.+.|.+ ++ . |-+ ..|....--.+-|.|.-.||..+.++
T Consensus 304 PSLLslPylGf~~~dDpiYqNTrk~IlS---~~-N--------Pyy--------~~G~~~~GiG~PH~~~~~~Wpmsl~~ 363 (426)
T 3qry_B 304 PSLLAAPYLGYCSVDDEVYQATRRTILS---SE-N--------PYF--------YQGEYASGLGSSHTFYRYIWPIALSI 363 (426)
T ss_dssp SCSTTTTTTTSSCTTCHHHHHHHHHHTS---TT-S--------TTE--------EECSSCEEECCTTSCTTEECHHHHHH
T ss_pred hhHHHHHHcCCCCCCCHHHHHHHHHHhc---cc-C--------Cce--------eccCccCcCCCCCCCCCCchHHHHHH
Confidence 455555 4566543 343444444422 22 1 211 11111111234577877777777775
Q ss_pred HHHHHcCChHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHH
Q 035779 570 AASIKTGRPQIAKRAIELAEQRLSKDG-WPEYYDGKTGRYVGKQARKYQTWSIAGYL 625 (659)
Q Consensus 570 ~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~fDG~~g~p~G~~ac~~QAWSaA~~L 625 (659)
.++.. ++.+++.+.|..+.+.-...+ ++|=||..++... .+.+.+|+=+.|-
T Consensus 364 ~~lTs-~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~ 416 (426)
T 3qry_B 364 QGLTT-RDKAEKKFLLDQLVACDGGTGVMHESFHVDDPTLY---SREWFSWANMMFC 416 (426)
T ss_dssp HHHTC-SCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---ECSCCHHHHHHHH
T ss_pred HHHhC-CCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCchhhhhHHHH
Confidence 55444 567888888888766544444 6999997764321 3579999998765
No 16
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=98.88 E-value=1.1e-07 Score=104.28 Aligned_cols=338 Identities=15% Similarity=0.160 Sum_probs=204.0
Q ss_pred CccceeeccCCCCcccCCCCCCchhhhHHHHHHHH--hcCCCCHHHHHHHHHHHHhhccccccccccccCCCcc--CCcc
Q 035779 210 GKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACL--MIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVM--PASF 285 (659)
Q Consensus 210 ~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglL--l~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~Gli--P~~f 285 (659)
|.+.-+|...| -...|-||+.-=+.-.+ +. .++++ ++.++-+.+.|.+--.+|+|. +.+- |++-
T Consensus 74 ~~~~tFviTGD-------I~AmWLRDS~~Q~~pYl~l~~--~d~~l-~~li~G~I~rQ~~~i~~dPYa--NAF~~~~~sg 141 (463)
T 3p2c_A 74 GKPDTFVYTGD-------IHAMWLRDSGAQVWPYVQLAN--SDPEL-KEMLAGVILRQFKCINIDPYA--NAFNDGAIPD 141 (463)
T ss_dssp SCEEEEECCBS-------SCSEEHHHHHHHTGGGGGGGG--GCHHH-HHHHHHHHHHHHHHHHHCTTC--SEECSSCCTT
T ss_pred CCCCEEEEeCC-------CcchhcccCHHHHHHHHHHhc--cCHHH-HHHHHHHHHHHHHHhccCccc--cccCCCCCCC
Confidence 45677777776 12689999766443332 33 57766 777778888888765566665 1111 1110
Q ss_pred eecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhc----cCCC-----
Q 035779 286 KVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLC----LSDG----- 356 (659)
Q Consensus 286 ki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~----~~dG----- 356 (659)
. -|.. +. ....|--.| |=..+|+--.+|.+.+.|++.|||.+|+. +...+|++.|++.. ..+|
T Consensus 142 ~-~~~~-d~-t~~~p~v~E----rKyElDSL~~~l~La~~y~~~Tgd~~~f~-~~w~~a~~~il~~~~~~q~~~~~s~Y~ 213 (463)
T 3p2c_A 142 G-HWMS-DL-TDMKPELHE----RKWEIDSLCYPLRLAYHYWKTTGDASIFN-EEWIQAITNVLKTFKEQQRKDGVGPYK 213 (463)
T ss_dssp C-TTTT-SB-SCCCTTEEE----CCCCHHHHHHHHHHHHHHHHHHCCCTTCS-HHHHHHHHHHHHHHHHTTCSSSSCSCC
T ss_pred C-cccC-CC-CCCCCcEEE----EecHhhhhhHHHHHHHHHHHhhCChhhhc-HHHHHHHHHHHHHHHHHhccCCCCCce
Confidence 0 0000 00 001111111 11468999999999999999999999997 47778888887642 1222
Q ss_pred CCc-----CCcccccC-------CCCcccc------cCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHH
Q 035779 357 FDT-----FPTLLCAD-------GCSMIDR------RMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRIT 418 (659)
Q Consensus 357 f~~-----~p~Ll~~D-------g~~~mD~------~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~ 418 (659)
|.. ..+| ..+ ...++.+ ..-++|+-|--|+++..+|+.+++|+..++++.++++++.+.+.
T Consensus 214 f~R~t~~~tdtl-~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~~la~~~~~lA~ 292 (463)
T 3p2c_A 214 FQRKTERALDTV-SNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKTALSKECKDLAQ 292 (463)
T ss_dssp CBCCBSCGGGSC-HHHHTCSCCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred EeecCCCCCccc-CCCCcCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 110 0001 000 0111111 01456788889999999999999999988778889999999999
Q ss_pred HHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHHH
Q 035779 419 ALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIAI 498 (659)
Q Consensus 419 ~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LAL 498 (659)
++++-|.+|.+++...+-.+|.|....|| +++. ||- -..+++|++
T Consensus 293 eIr~gI~k~gvv~~p~~G~iyAyEVDG~G--------------------------s~~l-------mDD--aNvPSLLsl 337 (463)
T 3p2c_A 293 EVETALKKYAVYNHPKYGKIYAFEVDGFG--------------------------NHHL-------MDD--ANVPSLLAM 337 (463)
T ss_dssp HHHHHHHHHSEEEETTTEEEECSEECSSS--------------------------CEEC-------CCC--SSSSCSTTH
T ss_pred HHHHHHHHhCEecCCCCceEEEEEEecCC--------------------------CccC-------CCC--CCchhHHHH
Confidence 99999999999876555455655433332 2221 110 023455666
Q ss_pred -hcCCCCH--HHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHc
Q 035779 499 -LSSLATP--AQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKT 575 (659)
Q Consensus 499 -lsgll~~--eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~ 575 (659)
.+|.++. +.-+.-.+.|.+ +. . |-+ +.|....--.+-|.|.-.||..+.++. .+..
T Consensus 338 PylGf~~~dDpiYqNTrk~IlS---~~-N--------PyY--------~~G~~~~GiG~PH~~~~~~Wpmsll~~-~lTs 396 (463)
T 3p2c_A 338 PYLGDVNVNDPIYQNTRRFVWS---ED-N--------PYF--------FKGKAGEGIGGPHIGYDMVWPMSIMMK-AFTS 396 (463)
T ss_dssp HHHTSSCTTCHHHHHHHHHHTS---TT-S--------TTE--------EECSSCEEECCTTTCTTEECHHHHHHH-HHTC
T ss_pred HHcCCCCCCCHHHHHHHHHHHh---cc-C--------Cce--------eccCccccCCCCCCCCCCchHHHHHHH-Hhcc
Confidence 5677554 344444454422 11 1 211 111111112344777777777777755 4446
Q ss_pred CChHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHH
Q 035779 576 GRPQIAKRAIELAEQRLSKDG-WPEYYDGKTGRYVGKQARKYQTWSIAGYLVA 627 (659)
Q Consensus 576 G~~~~A~~ll~~~~~~l~~~~-~pE~fDG~~g~p~G~~ac~~QAWSaA~~L~a 627 (659)
++.+++.+.|..+.+.-...+ ++|=||..++... ++.+.+||=+.|.-+
T Consensus 397 ~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaNs~F~el 446 (463)
T 3p2c_A 397 QNDAEIKTCIKMLMDTDAGTGFMHESFHKDNPKKF---TRAWFAWQNTLFGEL 446 (463)
T ss_dssp CCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---ECSCBHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcC---CCCchhhhhHHHHHH
Confidence 788899999988766555444 6999998765432 357999999987743
No 17
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=98.86 E-value=6.9e-08 Score=104.80 Aligned_cols=341 Identities=16% Similarity=0.136 Sum_probs=202.8
Q ss_pred ccccCccceeeccCCCCcccCCCCCCchhhhHH--HHHHHHhcCCCCHHHHHHHHHHHHhhccccccccccccCCCccCC
Q 035779 206 VYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVP--TALACLMIEPAEPEIVKNFLLKTLHLQGWEKRIDNFTLGEGVMPA 283 (659)
Q Consensus 206 v~~~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~I--S~lglLl~~~g~peiar~~L~~~a~lQ~~~~~ld~~~~~~GliP~ 283 (659)
|.+ |.+.-+|...|= ...|-||+.- ....-|+. .+++++ +.++-+.+.|.+--.+|+|. +.+-|.
T Consensus 44 v~~-~~~~tFviTGDI-------~AmWLRDS~~Ql~pY~~l~~--~d~~l~-~li~G~I~rQ~~~i~~dPYa--NAF~~~ 110 (427)
T 3qt9_A 44 VEV-SEGDAFVITGDI-------PAMWLRDSTSQVEHYLPFVK--EYPELK-AIFTGLINRQVKCIFIDPYA--NAFNKE 110 (427)
T ss_dssp EEE-ETTEEEECCBSS-------CSEEHHHHHHHTGGGGGGTT--TCGGGH-HHHHHHHHHHHHHHHHCTTC--SEECSS
T ss_pred eEe-CCCCEEEEeCCC-------cchhhccCHHHHhhhHHHhc--cCHHHH-HHHHHHHHHHHHHhccCccc--ccCCCC
Confidence 445 777788888861 2689999873 33333443 677665 66677778888765567776 211111
Q ss_pred cceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccCC--------
Q 035779 284 SFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSD-------- 355 (659)
Q Consensus 284 ~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~d-------- 355 (659)
.-.-.|.. . .++....-.-+=..+|+--.+|.+.+.|++.|||.+|+. +...+|++.|++.....
T Consensus 111 ~~~~~~~~---d---~t~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~-~~w~~a~~~il~~~~~~q~~~~~s~ 183 (427)
T 3qt9_A 111 PNGQKWDN---D---ITKDSPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFN-YDIKKAFNMIIDLWRVEQYHREKSD 183 (427)
T ss_dssp SCCCCSSC---C---BSCCCTTEEECCCCTHHHHHHHHHHHHHHHHHCCCTTCC-HHHHHHHHHHHHHHHHGGGHHHHCC
T ss_pred CCCcCcCC---C---CCCCCCceEeeccHHhhhHHHHHHHHHHHHhhCChhhhh-HHHHHHHHHHHHHHHHHhccCCCCC
Confidence 00000000 0 001110000111369999999999999999999999998 46778888887632110
Q ss_pred -CCCc-----CCcccc-cC-----CCCcccc------cCCCCCCchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHH
Q 035779 356 -GFDT-----FPTLLC-AD-----GCSMIDR------RMGIYGYPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRI 417 (659)
Q Consensus 356 -Gf~~-----~p~Ll~-~D-----g~~~mD~------~m~r~G~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra 417 (659)
.|.. ..+|.. +- ...++.+ .--++|+-|--|+++..||+.+++|+..++++.++++++.+.+
T Consensus 184 Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~d~~La~~~~~la 263 (427)
T 3qt9_A 184 YSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDEELKEKADSLR 263 (427)
T ss_dssp CCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred ceEeccCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 1210 000100 00 0111110 0135678888999999999999999998867788999999999
Q ss_pred HHHHHHHHHhccccccchhhhhhccccchhhhhhcccccCCCCCCccccccccCCCceEEeeecCCcccccccccchhHH
Q 035779 418 TALSYHIQKYYWLDFTQLNNIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPLRGGYLIGNVSPARMDFRWFLVGNCIA 497 (659)
Q Consensus 418 ~~Lk~~~~~~FW~d~~~l~~iyr~~te~y~~~A~nkfni~~~~iP~wl~~w~~~~GGYl~g~v~P~~~d~RifalGN~LA 497 (659)
.++++-|.+|..++...+-.+|.|....|| +++. ||- -..+++|+
T Consensus 264 ~eIr~aI~k~gvv~~p~~G~iyAyEVDG~G--------------------------s~~l-------MDD--aNvPSLLs 308 (427)
T 3qt9_A 264 EEIDNAIEKHGKVYKEGFGEVYAYETDGMG--------------------------NYNF-------MDD--ANVPSLLS 308 (427)
T ss_dssp HHHHHHHHHHSEEEETTTEEEECSEECSSS--------------------------CEEC-------CCC--SSSSCSTT
T ss_pred HHHHHHHHHhcEecCCCcceEEEEEeccCC--------------------------Cccc-------cCC--CCchhHHH
Confidence 999999999999886665556665433332 2221 110 12355566
Q ss_pred H-hcCCCCH--HHHHHHHHHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHH
Q 035779 498 I-LSSLATP--AQATAIMDLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIK 574 (659)
Q Consensus 498 L-lsgll~~--eqa~~Vl~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k 574 (659)
+ ..|.++. +.-+.-.+.|.+ ++ . |-+ ..|....--.+-|.|.-.||..+.++.+ +.
T Consensus 309 lPylGf~~~dDpiYqNTrk~IlS---~~-N--------Pyy--------~~G~~~~GIG~PH~~~~~~Wpmsl~~~~-lT 367 (427)
T 3qt9_A 309 IPYLEYKGIEDEVYQNTRKFILS---KN-N--------RFF--------FEGKAAKGIGSPHTPDQYIWHIALSMQG-LT 367 (427)
T ss_dssp HHHHTSSCTTCHHHHHHHHHHTS---TT-S--------TTE--------EECSSCEEECCTTSCTTEEEHHHHHHHH-HT
T ss_pred HHHcCCCCCCCHHHHHHHHHHhc---cc-C--------Cce--------eccCccCcCCCCCCCCCCchHHHHHHHH-hh
Confidence 6 5676554 333444444422 22 1 211 1111111123458887777777777443 44
Q ss_pred cCChHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHH
Q 035779 575 TGRPQIAKRAIELAEQRLSKDG-WPEYYDGKTGRYVGKQARKYQTWSIAGYL 625 (659)
Q Consensus 575 ~G~~~~A~~ll~~~~~~l~~~~-~pE~fDG~~g~p~G~~ac~~QAWSaA~~L 625 (659)
.+..+++.+.|..+.+.-...+ ++|=||..++... .+.+.+|+=+.|-
T Consensus 368 s~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~ 416 (427)
T 3qt9_A 368 TNNQEEIDQLIKLLKETDAGTGYMHEGFHVDDPTKF---TRDWFAWSNSLFS 416 (427)
T ss_dssp CCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---SCSCBHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCcchhhhHHHH
Confidence 5678888888888766554444 6999998764321 3579999998765
No 18
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=93.52 E-value=0.47 Score=56.33 Aligned_cols=83 Identities=16% Similarity=0.117 Sum_probs=51.8
Q ss_pred cHHHHHHHHHHHHHHcCChhhhc--cHHHHHHHHHHHH-hcc--C---CCC-CcCCcccccCCCCcccccCCCCCCchhh
Q 035779 315 SGFWWIILLRSYTKCTRDYALAE--LPEVQRGMKLILN-LCL--S---DGF-DTFPTLLCADGCSMIDRRMGIYGYPIEI 385 (659)
Q Consensus 315 atLWfIill~~Y~~~TGD~sfl~--~p~vq~aL~~Il~-~~~--~---dGf-~~~p~Ll~~Dg~~~mD~~m~r~G~PVEI 385 (659)
...|....+++|+++|||.+|++ .|-++.+.++..+ ... . +|. ...|. ..++... ++..| +...
T Consensus 507 ~~aWla~~lweyy~yTgD~~fL~~~yPlLkeaA~F~~d~~l~~~~~~~~G~~vi~ps-~SPE~~~-----~~~~~-~tyd 579 (899)
T 2eab_A 507 AVPWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHKAGSSSGDRLTTGVA-YSPEQGP-----LGTDG-NTYE 579 (899)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCEECCGGGCSSEECSEE-EETTEEE-----EEEEC-CHHH
T ss_pred hHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhheEecCcCCCCeEEEccc-cCCCCCC-----CCCCC-cHHH
Confidence 35688999999999999999996 4788888888888 432 2 232 22221 1111000 00111 3466
Q ss_pred HHHHHHHHHHHHHhcccCC
Q 035779 386 QSLFYFALRCARQMLKPER 404 (659)
Q Consensus 386 QALwY~ALr~aaeLa~~~~ 404 (659)
|++....+..+.+.++.++
T Consensus 580 n~l~~~ll~~~i~aa~~Lg 598 (899)
T 2eab_A 580 SSLVWQMLNDAIEAAKAKG 598 (899)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 8888788888777776553
No 19
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=89.84 E-value=0.73 Score=53.99 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHcCChhhhc---cHHHHHHHHHHHHhccC--CC-CCcCCcccccCCCCcccc--cCCCCCCchhhHH
Q 035779 316 GFWWIILLRSYTKCTRDYALAE---LPEVQRGMKLILNLCLS--DG-FDTFPTLLCADGCSMIDR--RMGIYGYPIEIQS 387 (659)
Q Consensus 316 tLWfIill~~Y~~~TGD~sfl~---~p~vq~aL~~Il~~~~~--dG-f~~~p~Ll~~Dg~~~mD~--~m~r~G~PVEIQA 387 (659)
+.|....+++|+++|||.+|++ .|-++.+.++..++... +| |...|. ..++... ... .....--+...|+
T Consensus 450 ~awla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~-~sPE~~~-~~~g~~~~~~~n~tytn~ 527 (803)
T 2rdy_A 450 GVWLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPS-TSPEQRF-RIGEKGYAVSSATTMDLS 527 (803)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSB-CBTTBCE-EETTEEECCBSCCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhEECCCCcEEECCC-Ccccccc-cCCCcccccccChHHHHH
Confidence 5688999999999999999998 48889999998887632 23 222222 1122110 000 0000001468899
Q ss_pred HHHHHHHHHHHhcccCCCChHHHHHHHHHHH
Q 035779 388 LFYFALRCARQMLKPERDGKELIERIDKRIT 418 (659)
Q Consensus 388 LwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~ 418 (659)
++...|+.+.++++.++-+.++.+++++.++
T Consensus 528 ~~~~~l~~a~~a~~~Lg~~~~~~~~w~~~~~ 558 (803)
T 2rdy_A 528 LIAECFDNCIQAAKRLSIDEDFVKALSDAKQ 558 (803)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHh
Confidence 9999999999999988656665666554443
No 20
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=89.75 E-value=6.8 Score=40.69 Aligned_cols=97 Identities=7% Similarity=-0.046 Sum_probs=53.3
Q ss_pred CcHHHHHHHHHHHHHH-cCChhhhccHHHHHHHHHHHHhccC-C-CCCcCCcccccCCCCcccccCCCCCCchhhHHHHH
Q 035779 314 DSGFWWIILLRSYTKC-TRDYALAELPEVQRGMKLILNLCLS-D-GFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFY 390 (659)
Q Consensus 314 DatLWfIill~~Y~~~-TGD~sfl~~p~vq~aL~~Il~~~~~-d-Gf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY 390 (659)
|-++. |.++.+-++. |||..+++. +.++++++++.+.. + ||. ..+..||.. .+ ....++-||++.
T Consensus 54 ~nar~-i~~~a~a~~~~~~~~~~~~~--A~~~~~~l~~~~~~~~Gg~~---~~~d~dg~~-~~-----~~~~~~~~af~i 121 (388)
T 2gz6_A 54 LQNRQ-VWTFSMLCNQLEKRENWLKI--ARNGAKFLAQHGRDDEGNWY---FALTRGGEP-LV-----QPYNIFSDCFAA 121 (388)
T ss_dssp HHHHH-HHHHHHHHHHTCCCHHHHHH--HHHHHHHHHHHSBCTTSCBC---SEECTTSCB-CC-----CCCCHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHhcCCHHHHHH--HHHHHHHHHHhcCCCCCCEE---EEEcCCCCc-cc-----CCcchHHHHHHH
Confidence 44433 5555555666 899988764 78999999987532 3 332 111122211 11 124567788877
Q ss_pred HHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhccc
Q 035779 391 FALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWL 430 (659)
Q Consensus 391 ~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~ 430 (659)
.|+..+.+.. ++.+ +.+.+.++.+.|.++||.
T Consensus 122 ~al~~~y~~t----g~~~----~l~~A~~~~~~i~~~~~d 153 (388)
T 2gz6_A 122 MAFSQYALAS----GEEW----AKDVAMQAYNNVLRRKDN 153 (388)
T ss_dssp HHHHHHHHHH----CCHH----HHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHh----CCHH----HHHHHHHHHHHHHHHhcC
Confidence 7776555442 3333 334455666677777763
No 21
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=87.42 E-value=3.8 Score=47.64 Aligned_cols=80 Identities=11% Similarity=0.051 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHcCChhhhc---cHHHHHHHHHHHHhcc---CCCCCcCCcccccCCCCcccccCCCCCCchhhHHHH
Q 035779 316 GFWWIILLRSYTKCTRDYALAE---LPEVQRGMKLILNLCL---SDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLF 389 (659)
Q Consensus 316 tLWfIill~~Y~~~TGD~sfl~---~p~vq~aL~~Il~~~~---~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALw 389 (659)
+.|...++++|++.|||.+|++ .|-+..+-++...+.. .+|.-..++..-+|-.. . .+. -+...|.++
T Consensus 429 ~a~ia~a~~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdEy~--e---~v~-nn~ytn~~a 502 (754)
T 1h54_A 429 NGDIAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYE--N---NVD-NNWDTNMLA 502 (754)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSSTTS--C---SBS-CCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHHhCChHHHHHHHHHHHHheEEeCCCCEEEEccccCccccc--C---CCC-CcHHHHHHH
Confidence 5788889999999999999998 4777888887777642 22322122211122110 0 011 236789999
Q ss_pred HHHHHHHHHhcc
Q 035779 390 YFALRCARQMLK 401 (659)
Q Consensus 390 Y~ALr~aaeLa~ 401 (659)
...|+.+.++++
T Consensus 503 ~~~l~~a~~~~~ 514 (754)
T 1h54_A 503 QWTLKYTLEILG 514 (754)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 999999999884
No 22
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=72.61 E-value=1e+02 Score=32.72 Aligned_cols=124 Identities=19% Similarity=0.254 Sum_probs=65.5
Q ss_pred cccCccceeeccCCCCcccCCCCCCchhhhHHHHHHHHh--cCCCCHHHHH---HHHHHHHhhccccccccccccCCCcc
Q 035779 207 YFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLM--IEPAEPEIVK---NFLLKTLHLQGWEKRIDNFTLGEGVM 281 (659)
Q Consensus 207 ~~~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl--~~~g~peiar---~~L~~~a~lQ~~~~~ld~~~~~~Gli 281 (659)
.|+ ..+|+|.+-++..+..|+..+|. |++..+..+.. ..+|+++..+ ....++++.. ..++|-.
T Consensus 123 r~~-~~~g~i~sw~~~~~~~~~~~~iI-D~mmni~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~---------~r~dgs~ 191 (377)
T 2ahf_A 123 RWR-ADAGIIQAWGPKGDPENGGRIII-DCLLNLPLLLWAGEQTGDPEYRRVAEAHALKSRRFL---------VRGDDSS 191 (377)
T ss_dssp TEE-TTTTEECCBSSTTCTTTTTEEEG-GGGGGHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHT---------BBTTSCB
T ss_pred hCC-CCCCeEEeccCCCCCCCCceEEe-chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC---------cCCCCCe
Confidence 344 34599988653323346555554 76665444431 1137775444 4333333321 1134533
Q ss_pred CCcceecccccccccccccCCCCCCCCCcCCCCcH------HHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhc
Q 035779 282 PASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSG------FWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLC 352 (659)
Q Consensus 282 P~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDat------LWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~ 352 (659)
-+.++. +|.+| .+.+|...-|. .|.+ -|+|.++-+.+++|||..+++. .++..+++++..
T Consensus 192 ~h~~~~--D~~tG----~~~~~~t~qG~---~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~--A~~la~~~l~~~ 257 (377)
T 2ahf_A 192 YHTFYF--DPENG----NAIRGGTHQGN---TDGSTWTRGQAWGIYGFALNSRYLGNADLLET--AKRMARHFLARV 257 (377)
T ss_dssp CSEEEE--CTTTC----CEEEEECSSSS---STTSCBHHHHHHHHHHHHHHHHHHTCHHHHHH--HHHHHHHHHTTC
T ss_pred EEEEEe--eCCCC----CeeeCCCcCCc---CCcchhHHHHHHHHHHHHHHHHHHCChHHHHH--HHHHHHHHHHhh
Confidence 343221 22122 22221111122 3444 7999999999999999999874 556667777654
No 23
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=59.71 E-value=97 Score=31.84 Aligned_cols=97 Identities=8% Similarity=0.019 Sum_probs=53.7
Q ss_pred CCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhcc-CCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHH
Q 035779 313 VDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCL-SDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYF 391 (659)
Q Consensus 313 VDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~-~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ 391 (659)
.+.--++|.++.++++.|||...++. ..+.++.|++... .+|+. ......+ . +..| ...++....
T Consensus 114 ~~~~af~i~al~~~y~~tg~~~~l~~--A~~~~~~i~~~~~d~~g~~------~~~~~~~---~-~~~~--~~~~~~~~~ 179 (388)
T 2gz6_A 114 IFSDCFAAMAFSQYALASGEEWAKDV--AMQAYNNVLRRKDNPKGKY------TKTYPGT---R-PMKA--LAVPMILAN 179 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHTC--------------------C---C-CCEE--THHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHhcCCCccc------CcccCCC---C-CCCC--CCHHHHHHH
Confidence 45566789999999999999988764 6677777776542 22331 1111111 0 1112 345554444
Q ss_pred HHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhcccc
Q 035779 392 ALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLD 431 (659)
Q Consensus 392 ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d 431 (659)
|+. .|.+.. ++ .++.+++.++-+.+.++||..
T Consensus 180 all---~l~~~t-~d----~~~~~~A~~~~~~~~~~~~~~ 211 (388)
T 2gz6_A 180 LTL---EMEWLL-PQ----ETLENVLAATVQEVMGDFLDQ 211 (388)
T ss_dssp HHH---HTGGGS-CH----HHHHHHHHHHHHHHHHTTEET
T ss_pred HHH---HHHHHc-CC----HHHHHHHHHHHHHHHHHHhcc
Confidence 443 455544 33 245566777777888888754
No 24
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=49.40 E-value=2.7e+02 Score=29.76 Aligned_cols=34 Identities=21% Similarity=0.182 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhc
Q 035779 317 FWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLC 352 (659)
Q Consensus 317 LWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~ 352 (659)
-|.|.++-+.+++|||..+++. .++..+++++..
T Consensus 249 Aw~i~gl~~lY~~T~d~~yL~~--A~~la~~~l~~~ 282 (397)
T 2zzr_A 249 AWGIYGIPLSYRKMKDYQQIIL--FKGMTNYFLNRL 282 (397)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHhh
Confidence 7999999999999999999975 566677777765
No 25
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=47.68 E-value=3.8e+02 Score=30.89 Aligned_cols=175 Identities=15% Similarity=0.067 Sum_probs=91.1
Q ss_pred cchHHHHHHHHHHhhhccccCccceeeccCCCCcccCCCCCCchhhhHHHHHHHHhcCCCCHH------HHHHHHHHHHh
Q 035779 190 GAAMMEEALERLKKSYVYFKGKPVGTFAAMDPNAEALNYNQVFVRDFVPTALACLMIEPAEPE------IVKNFLLKTLH 263 (659)
Q Consensus 190 ~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~d~~~~~~nY~~vfGRDt~IS~lglLl~~~g~pe------iar~~L~~~a~ 263 (659)
.++.++.+++.+++-++. .+.|...-. .+=.++| ||.+++.++.-. |.++ .++..+..+..
T Consensus 354 ~~~~~~~~l~~l~~~l~~---~~dG~~~q~------~~gs~vw--dTalal~AL~~a--g~~~~~~~~~~l~ka~~~L~~ 420 (732)
T 1w6k_A 354 ASTAFQEHVSRIPDYLWM---GLDGMKMQG------TNGSQIW--DTAFAIQALLEA--GGHHRPEFSSCLQKAHEFLRL 420 (732)
T ss_dssp TSHHHHHHHHTSGGGEEE---ETTEEEECS------SSCCHHH--HHHHHHHHHHHT--TGGGCGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhee---CCCCceeCC------CCCCchH--HHHHHHHHHHHc--CCCcchhhHHHHHHHHHHHHH
Confidence 455566666666554432 445543211 1113677 999999888775 6433 55666666667
Q ss_pred hcccccccc---ccccCCCccCCcceecccccccccccccCCCCCCCCCcCCCCcHHHHHHHHHHHHHHcCChh-hhccH
Q 035779 264 LQGWEKRID---NFTLGEGVMPASFKVLFNSHQQKETLVADFGGSAIGRVAPVDSGFWWIILLRSYTKCTRDYA-LAELP 339 (659)
Q Consensus 264 lQ~~~~~ld---~~~~~~GliP~~fki~h~p~~~~e~~~~dfG~~aiG~v~sVDatLWfIill~~Y~~~TGD~s-fl~~p 339 (659)
.|..+..-| .|+... |+.+ .|.... ..+..+|.|..-+.+|..+.+..++.. ....+
T Consensus 421 ~Q~~~~~~d~~~~~r~~~---~GGW---------------~f~~~~-~~~pd~d~TA~vl~aL~~~~~~~~~~g~~~~~~ 481 (732)
T 1w6k_A 421 SQVPDNPPDYQKYYRQMR---KGGF---------------SFSTLD-CGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRE 481 (732)
T ss_dssp HSCCCCCTTGGGGTCCCC---TTCC---------------BSSCTT-TCCBCHHHHHHHHHHHHHHHHHCTTCCSCCCHH
T ss_pred hcccccCCcccccccCCC---CCee---------------cCCCCC-CCCCccccHHHHHHHHHHHhcccccccchhhHH
Confidence 665431000 111000 1111 011000 113458999999999998877765321 12246
Q ss_pred HHHHHHHHHHHhccCC-CCCcCCcccccCCCCc---cc------ccCCCCCCchhhHHHHHHHHHHHHHhc
Q 035779 340 EVQRGMKLILNLCLSD-GFDTFPTLLCADGCSM---ID------RRMGIYGYPIEIQSLFYFALRCARQML 400 (659)
Q Consensus 340 ~vq~aL~~Il~~~~~d-Gf~~~p~Ll~~Dg~~~---mD------~~m~r~G~PVEIQALwY~ALr~aaeLa 400 (659)
.++++++||+..-..| ||..+..- .+..| +. ..| +..--+++.+....||..+..+.
T Consensus 482 ~i~~av~wLls~Q~~DGgw~a~~~~---~~~~~l~~i~~~e~fg~~~-~d~s~v~~Ta~vL~aL~~~~~~~ 548 (732)
T 1w6k_A 482 RLCDAVAVLLNMRNPDGGFATYETK---RGGHLLELLNPSEVFGDIM-IDYTYVECTSAVMQALKYFHKRF 548 (732)
T ss_dssp HHHHHHHHHHTTCCTTSCBCSSSCC---CSCGGGGGGCCCSSCSSCS-SCCCBHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCCCCEEeecCC---CchHHHhhCcchhcccccc-cCCCcchHHHHHHHHHHHhcccc
Confidence 7899999999864344 67544321 11111 11 011 11124677777777777666553
No 26
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=35.86 E-value=2e+02 Score=29.89 Aligned_cols=99 Identities=12% Similarity=-0.121 Sum_probs=55.4
Q ss_pred cHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhc-cCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHH
Q 035779 315 SGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLC-LSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFAL 393 (659)
Q Consensus 315 atLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~-~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~AL 393 (659)
+.--+++++.++++.|||...++. .+++++|+.+.. +.+|.. +.++ ..++.+-.+ ....=.+-||.+..++
T Consensus 151 sN~~~~~~la~l~~~tgd~~Yl~~--A~~~~~w~~~~l~d~~g~v-~Dg~-~~~~~g~~~----~~~~~tYnqg~~l~g~ 222 (349)
T 3k7x_A 151 VNAPFIILSCWLYNELNETKYLEW--AMKTYEWQTKVLVREDGFV-EDGI-NRLEDGTID----YEWKFTYNQGVYIGAN 222 (349)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHBCTTSCB-CCEE-CTTSSSCBC----TTCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHhcCCCCCCeE-ecCC-ccCCCCccC----CcCeeeHHHHHHHHHH
Confidence 344557777888899999998875 789999998854 233322 1111 111111111 0112245688765555
Q ss_pred HHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhcc
Q 035779 394 RCARQMLKPERDGKELIERIDKRITALSYHIQKYYW 429 (659)
Q Consensus 394 r~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW 429 (659)
..+ .+.. +++ ++.+++..|-..+.++|+
T Consensus 223 ~~L---Y~~T-~d~----~yl~~a~~l~~~~~~~f~ 250 (349)
T 3k7x_A 223 LEL---YRIT-KEA----IYLDTANKTAAISLKELT 250 (349)
T ss_dssp HHH---HHHH-CCH----HHHHHHHHHHHHHHHHHE
T ss_pred HHH---HHhh-CcH----HHHHHHHHHHHHHHHHhc
Confidence 544 3333 343 345556666667777776
No 27
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=35.16 E-value=4.2e+02 Score=27.82 Aligned_cols=81 Identities=9% Similarity=-0.001 Sum_probs=42.3
Q ss_pred HHHHHHHHHcCChhhhccHHHHHHHHHHHHhc---cCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHH
Q 035779 321 ILLRSYTKCTRDYALAELPEVQRGMKLILNLC---LSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCAR 397 (659)
Q Consensus 321 ill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~---~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aa 397 (659)
.++-..++.|||...++. ++...+++++.. ..+||.... .. ..+...+-+-++ |+++-.++
T Consensus 117 ~~l~~lY~~Tgd~~Yl~~--a~~~ad~L~~~~~r~~~Ggf~~~~-------~~------~~~~~~~WiDgl-~M~~p~La 180 (382)
T 3pmm_A 117 LTLAYRFEETGRMAYLPW--LESWAEWAMHEMPRTEQGGMQHMT-------LA------EENHQQMWDDTL-MMTVLPLA 180 (382)
T ss_dssp HHHHHHHHHHCCGGGHHH--HHHHHHHHHHTSCBCGGGCBCCCC-------SS------CCCTTEEETTHH-HHTHHHHH
T ss_pred HHHHHHHHHhCCHHHHHH--HHHHHHHHHhhCCCCcCCCeeeec-------CC------CCCCCcEEecch-hhhHHHHH
Confidence 355667789999987753 667777776532 122443110 00 001112223332 45666666
Q ss_pred HhcccCCCChHHHHHHHHHHH
Q 035779 398 QMLKPERDGKELIERIDKRIT 418 (659)
Q Consensus 398 eLa~~~~~~~~~a~~l~~ra~ 418 (659)
.+.+.. ++++..+.+.+.+.
T Consensus 181 ~~~~~t-gd~~y~d~A~~q~~ 200 (382)
T 3pmm_A 181 KIGKLL-NRPQYVEEATYQFL 200 (382)
T ss_dssp HHHHHT-TCHHHHHHHHHHHH
T ss_pred HHHHHH-CCHHHHHHHHHHHH
Confidence 677666 66666555444443
No 28
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=33.25 E-value=3.5e+02 Score=30.35 Aligned_cols=137 Identities=14% Similarity=0.118 Sum_probs=73.8
Q ss_pred cchHHHHHHHHHHhhhccccCccceeeccC----CCC-----cccCCCCCCchhhhHHHHHHHHhcCCCCH------HHH
Q 035779 190 GAAMMEEALERLKKSYVYFKGKPVGTFAAM----DPN-----AEALNYNQVFVRDFVPTALACLMIEPAEP------EIV 254 (659)
Q Consensus 190 ~~~~~~~a~~~l~~s~v~~~~~~~Gt~Aa~----d~~-----~~~~nY~~vfGRDt~IS~lglLl~~~g~p------eia 254 (659)
.++.+.+|.+-|++..+.- .|..+-. .+. .....|..+| ||..++..++.. +.+ +.+
T Consensus 329 ~~~~~~ka~~~L~~~q~~~----~g~~~~~~~~~s~GgW~f~~~~~~~p~v~--dTA~al~AL~~~--~~~~~~~~~~~l 400 (631)
T 2sqc_A 329 DHDRLVKAGEWLLDRQITV----PGDWAVKRPNLKPGGFAFQFDNVYYPDVC--DTAVVVWALNTL--RLPDERRRRDAM 400 (631)
T ss_dssp TCHHHHHHHHHHHHTCCCS----CCGGGGTCTTSCCCCBCSSSSCTTCCBHH--HHHHHHHHHTTC--CCSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC----CCChhhhcCCCCCCCCccccCCCCCCchH--HHHHHHHHHHHc--CCCccchhHHHH
Confidence 4788999999998876522 2322211 110 0112455666 888888888775 653 345
Q ss_pred HHHHHHHHhhccccccccccccCCCccCCcceeccccccccc-ccccCCCCCC-CCCcCCCCcHHHHHHHHHHHHHHcCC
Q 035779 255 KNFLLKTLHLQGWEKRIDNFTLGEGVMPASFKVLFNSHQQKE-TLVADFGGSA-IGRVAPVDSGFWWIILLRSYTKCTRD 332 (659)
Q Consensus 255 r~~L~~~a~lQ~~~~~ld~~~~~~GliP~~fki~h~p~~~~e-~~~~dfG~~a-iG~v~sVDatLWfIill~~Y~~~TGD 332 (659)
+..+..++.+|... |-.+. |. ...+.. .....|+... .-....+|.|-.-+.+|..+ |+
T Consensus 401 ~~a~~wLls~Q~~d----------Ggf~~-~~----~~~~~~~~~~~~F~~~~~~~d~~~vd~Ta~vl~aL~~~----g~ 461 (631)
T 2sqc_A 401 TKGFRWIVGMQSSN----------GGWGA-YD----VDNTSDLPNHIPFSDFGEVTDPPSEDVTAHVLECFGSF----GY 461 (631)
T ss_dssp HHHHHHHHHTCCTT----------SCBCS-SC----SSCCCSGGGGSTTCSSSCSSCCCBHHHHHHHHHHHHTT----TC
T ss_pred HHHHHHHHhhcCCC----------CCCCc-cC----CCCccccccccccccCCcccCCCCchHHHHHHHHHHhc----CC
Confidence 66667777777542 32222 10 000000 0011232210 00113578898888888765 32
Q ss_pred hhhhccHHHHHHHHHHHHhccCC
Q 035779 333 YALAELPEVQRGMKLILNLCLSD 355 (659)
Q Consensus 333 ~sfl~~p~vq~aL~~Il~~~~~d 355 (659)
. ...+.++++++||.+.-..|
T Consensus 462 ~--~~~~~i~rai~~L~~~Q~~D 482 (631)
T 2sqc_A 462 D--DAWKVIRRAVEYLKREQKPD 482 (631)
T ss_dssp C--TTSHHHHHHHHHHHHHCCTT
T ss_pred C--ccHHHHHHHHHHHHHhcCCC
Confidence 1 12477999999998754333
No 29
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=29.99 E-value=3.5e+02 Score=29.41 Aligned_cols=84 Identities=11% Similarity=0.115 Sum_probs=51.4
Q ss_pred CCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhcc---CCCCCcCCcccccCCCCcccccCCCCCCchhhHHHH
Q 035779 313 VDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCL---SDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLF 389 (659)
Q Consensus 313 VDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~---~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALw 389 (659)
.|..-++++++..-++.|+|...++ .+....+||++... ++||-.... .....|+| + .
T Consensus 144 LDD~g~~~~~Li~lY~~T~d~~yl~--~a~~~ad~L~~~~pRt~~Ggf~h~~~---~~~q~WiD-------------~-l 204 (445)
T 3k11_A 144 LDDAGAVCTAMIKLRLKDESLPVDG--LIQNYFDFIINKEYRLADGTFARNRP---QRNTLWLD-------------D-M 204 (445)
T ss_dssp GGGTHHHHHHHHHHHHHCTTCCCHH--HHHHHHHHHHHTSCBCTTCCBCBCSS---STTEEETH-------------H-H
T ss_pred chhHHHHHHHHHHHHHhcCCHHHHH--HHHHHHHHHHHcCCCCCCCceeecCC---CCCceEec-------------c-h
Confidence 6777788888888889999987665 47788888887531 124432110 01123444 2 3
Q ss_pred HHHHHHHHHhcccCCCChH--HHHHHHHH
Q 035779 390 YFALRCARQMLKPERDGKE--LIERIDKR 416 (659)
Q Consensus 390 Y~ALr~aaeLa~~~~~~~~--~a~~l~~r 416 (659)
|+++-.++.+.... ++++ ..+.+.+.
T Consensus 205 yM~~pfla~~~~~t-gd~~~~y~d~A~~q 232 (445)
T 3k11_A 205 FMGIPAVAQMSRYD-KEAKNKYLAEAVKQ 232 (445)
T ss_dssp HHHHHHHHHHHHHC-GGGHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHH-CCcchHHHHHHHHH
Confidence 67777777777777 4444 44444333
No 30
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=29.81 E-value=1.3e+02 Score=33.28 Aligned_cols=76 Identities=8% Similarity=-0.014 Sum_probs=48.5
Q ss_pred HHHHHHHHhhhcCCCcccccCCCCCCCceEeecCCCCCCCcccccCCcchhhHHHHHHHHHHcCChHHHHHHHHHHHHHh
Q 035779 513 DLIEERWEDLIGEMPLKISYPALDGHEWRIVTGYDPKNTRWSYHNGGSWPVLLWLLTAASIKTGRPQIAKRAIELAEQRL 592 (659)
Q Consensus 513 ~~V~~~~~~Lltp~GLr~l~Pa~~d~~wr~~t~gdp~~rP~SYHNGgVWP~llg~~~~Al~k~G~~~~A~~ll~~~~~~l 592 (659)
+.|...|..|...+. ..|. .+.++.--.|...|. ++=...|.|+.++.+.|++..|+.+.|+..+..+....
T Consensus 87 ~~i~~~W~~l~r~~~---~~~~----~~sli~~p~~~vvPG-g~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~ 158 (535)
T 2jg0_A 87 EHIDGLWPVLTRSTE---NTEK----WDSLLPLPEPYVVPG-GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEI 158 (535)
T ss_dssp HHHHHHTTTTEECCS---SCCT----TCSBCCCSSCEECCB-TTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCC---CCCC----ccccccCCCCcccCC-ccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 444445888865433 1221 112222123333443 44556899999999999999999999999999887666
Q ss_pred cCCC
Q 035779 593 SKDG 596 (659)
Q Consensus 593 ~~~~ 596 (659)
..++
T Consensus 159 ~~~G 162 (535)
T 2jg0_A 159 DTYG 162 (535)
T ss_dssp HHHS
T ss_pred ccCC
Confidence 4443
No 31
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=29.14 E-value=5e+02 Score=26.86 Aligned_cols=80 Identities=11% Similarity=-0.059 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccCCCCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHHHHHHh
Q 035779 320 IILLRSYTKCTRDYALAELPEVQRGMKLILNLCLSDGFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALRCARQM 399 (659)
Q Consensus 320 Iill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~dGf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr~aaeL 399 (659)
+-++..|++.|||.++.+. +.++++.+... .+++. . .++ .+.++.|-.|+..+.++
T Consensus 52 ~~~l~d~~~~tgd~~y~~~--a~~~~~~~~~~--~~~~~-------------~------~~~-~DD~a~~~la~~~aye~ 107 (349)
T 3k7x_A 52 VEVRLDAYLRTKKQADLEV--AEKTYLHNKNR--NGGTL-------------I------HDF-YDDMLWNALAAYRLYKA 107 (349)
T ss_dssp HHHHHHHHHHHCCHHHHHH--HHHHHHHHHHH--TTSSS-------------C------CSB-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHH--HHHHHHHHHhc--CCCCC-------------C------ccC-ccHHHHHHHHHHHHHHH
Confidence 4677889999999998764 66777777652 11111 1 111 46789888888777776
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHHhcccc
Q 035779 400 LKPERDGKELIERIDKRITALSYHIQKYYWLD 431 (659)
Q Consensus 400 a~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d 431 (659)
. ++++ +.+.+..+-..+...+|.+
T Consensus 108 t----~~~~----yL~~A~~l~~~l~~~~wd~ 131 (349)
T 3k7x_A 108 T----GKSI----YLEDAQLVWQDLVDTGWND 131 (349)
T ss_dssp H----CCHH----HHHHHHHHHHHHHHHTBCS
T ss_pred H----CCch----HHHHHHHHHHHHHHhCCCC
Confidence 4 3433 3333444555553456644
No 32
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=28.66 E-value=2e+02 Score=30.15 Aligned_cols=93 Identities=11% Similarity=0.114 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhccC-C--CCCcCCcccccCCCCcccccCCCCCCchhhHHHHHHHHH
Q 035779 318 WWIILLRSYTKCTRDYALAELPEVQRGMKLILNLCLS-D--GFDTFPTLLCADGCSMIDRRMGIYGYPIEIQSLFYFALR 394 (659)
Q Consensus 318 WfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~~~-d--Gf~~~p~Ll~~Dg~~~mD~~m~r~G~PVEIQALwY~ALr 394 (659)
.+|.++..-++.+|+..+++. +.+++++|.+.+.. + ||. ..+ .||.. .| .-..++-+|+.-.|+.
T Consensus 56 r~i~~~a~a~~~~g~~~~l~~--A~~~~~fl~~~~~d~~~Gg~~---~~~-~dG~~-~~-----~~~~lyd~Af~i~al~ 123 (402)
T 3gt5_A 56 RFVFNYAMAYLQFGTAEYLDA--VHHGLSYVRDVHRNPATGGYA---WTL-CDDRV-ED-----DTNHCYGLAFVMLAYS 123 (402)
T ss_dssp HHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHTTBCTTTSCBC---SEE-ETTEE-EE-----CCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCChHHHHH--HHHHHHHHHHhCccCCCCcEE---EEe-eCCCC-Cc-----CCcchHHHHHHHHHHH
Confidence 346666666777899888764 78999999886532 2 222 111 22111 01 1245678887777766
Q ss_pred HHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhcccc
Q 035779 395 CARQMLKPERDGKELIERIDKRITALSYHIQKYYWLD 431 (659)
Q Consensus 395 ~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d 431 (659)
.+ .. . ++.+ +.+.+.++-+.+.++||.+
T Consensus 124 ~~-~~---t-gd~~----~l~~A~~l~~~i~~~f~d~ 151 (402)
T 3gt5_A 124 CG-LK---V-GIKQ----AREWMDETWCLLERHFWDA 151 (402)
T ss_dssp HH-HH---T-TCTT----HHHHHHHHHHHHHHHTEET
T ss_pred HH-HH---h-CChh----HHHHHHHHHHHHHHHhcCC
Confidence 63 22 2 3333 3334666777888899854
No 33
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=27.82 E-value=3.8e+02 Score=27.63 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=58.3
Q ss_pred CCCcHHHH----HHHHHHHHHHc---CChhhhccHHHHHHHHHHHHhc-cCC---CCCcCCcccccCCCCcccccCCCCC
Q 035779 312 PVDSGFWW----IILLRSYTKCT---RDYALAELPEVQRGMKLILNLC-LSD---GFDTFPTLLCADGCSMIDRRMGIYG 380 (659)
Q Consensus 312 sVDatLWf----Iill~~Y~~~T---GD~sfl~~p~vq~aL~~Il~~~-~~d---Gf~~~p~Ll~~Dg~~~mD~~m~r~G 380 (659)
+.+-.+|+ |.++..-++.+ |+..+++ .+.+++++|.+.+ +.+ ||. + . +..||. .+...
T Consensus 50 ~~~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~--~A~~~~~fl~~~~~d~~gg~g~~-~-s-~d~dg~------~~~~~ 118 (402)
T 1fp3_A 50 DDLKYVWLQGRQVWMYCRLYRKLERFHRPELLD--AAKAGGEFLLRHARVAPPEKKCA-F-V-LTRDGR------PVKVQ 118 (402)
T ss_dssp CCCEEHHHHHHHHHHHHHHHHHCGGGCCHHHHH--HHHHHHHHHHHHTBSSTTSCCBC-S-E-ECTTSC------EEECC
T ss_pred CCccchhhhHHHHHHHHHHHHHhcccCCHHHHH--HHHHHHHHHHHhccCcCCCCceE-E-E-ECCCCC------ccccc
Confidence 34566787 77777666765 9988775 4889999999875 222 333 1 0 111211 01113
Q ss_pred CchhhHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHHHHHHHHhcccc
Q 035779 381 YPIEIQSLFYFALRCARQMLKPERDGKELIERIDKRITALSYHIQKYYWLD 431 (659)
Q Consensus 381 ~PVEIQALwY~ALr~aaeLa~~~~~~~~~a~~l~~ra~~Lk~~~~~~FW~d 431 (659)
+-++-||++-.|+..+.+.. ++.+ ..+.+.++-..+.++||.+
T Consensus 119 ~~lyd~af~~~a~~~~~~at----gd~~----~~~~A~~l~~~~~~~~~d~ 161 (402)
T 1fp3_A 119 RSIFSECFYTMAMNELWRVT----AEAR----YQSEAVDMMDQIVHWVRED 161 (402)
T ss_dssp SSSHHHHHHHHHHHHHHHHH----CCHH----HHHHHHHHHHHHHHHHHTC
T ss_pred cchHHHHHHHHHHHHHHHHh----CCHH----HHHHHHHHHHHHHHHhccC
Confidence 45677998887776555543 3333 2333555556677777733
No 34
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=26.16 E-value=2.5e+02 Score=29.75 Aligned_cols=39 Identities=8% Similarity=0.120 Sum_probs=28.3
Q ss_pred CCCcHHHHHHHHHHHHHHcCChhhhccHHHHHHHHHHHHhc
Q 035779 312 PVDSGFWWIILLRSYTKCTRDYALAELPEVQRGMKLILNLC 352 (659)
Q Consensus 312 sVDatLWfIill~~Y~~~TGD~sfl~~p~vq~aL~~Il~~~ 352 (659)
+-|-++-+...+...++.|||....+ .+.++-+++....
T Consensus 86 ~HD~Gf~~~~s~~~~y~ltg~~~~~~--~~~~aA~~L~~r~ 124 (377)
T 2ahf_A 86 HHNIGFLYSLSAKAQWIVEKDESARK--LALDAADVLMRRW 124 (377)
T ss_dssp BSTHHHHHHTTHHHHHHHHCCHHHHH--HHHHHHHHHHTTE
T ss_pred CCCchHhhHHHHHHHHHHhCCHHHHH--HHHHHHHHHHHhC
Confidence 35788777767777888999997664 3667777776644
No 35
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=24.30 E-value=6.7e+02 Score=26.70 Aligned_cols=51 Identities=20% Similarity=0.136 Sum_probs=35.5
Q ss_pred CcccccCCcchhhHHHHHHHHHHc----CC---hHHHHHHHHHHHHHhcCCCCCccccC
Q 035779 552 RWSYHNGGSWPVLLWLLTAASIKT----GR---PQIAKRAIELAEQRLSKDGWPEYYDG 603 (659)
Q Consensus 552 P~SYHNGgVWP~llg~~~~Al~k~----G~---~~~A~~ll~~~~~~l~~~~~pE~fDG 603 (659)
-..|++.+.|..=.++.+.|++.. |. .+.|.++.+-+.+++..++.| +||.
T Consensus 235 ~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~d~~p-ywdt 292 (397)
T 2zzr_A 235 RQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPEDKVS-YWDL 292 (397)
T ss_dssp TTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCTTSCC-BSBT
T ss_pred ccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHhCCc-cccC
Confidence 347888999998888888888873 43 456766666667776544444 6664
Done!