Query 035782
Match_columns 159
No_of_seqs 122 out of 1132
Neff 11.5
Searched_HMMs 46136
Date Fri Mar 29 06:22:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035782.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035782hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0197 Tyrosine kinases [Sign 99.9 1.7E-28 3.6E-33 169.8 5.4 130 1-150 334-464 (468)
2 KOG0192 Tyrosine kinase specif 99.9 2.1E-27 4.6E-32 163.2 9.8 135 1-155 174-311 (362)
3 KOG1026 Nerve growth factor re 99.9 5.8E-27 1.3E-31 169.7 5.3 130 1-149 634-764 (774)
4 KOG0581 Mitogen-activated prot 99.9 1.7E-26 3.7E-31 154.0 4.7 125 1-142 210-334 (364)
5 KOG0591 NIMA (never in mitosis 99.9 1.5E-25 3.2E-30 145.4 7.0 124 1-145 159-283 (375)
6 KOG0593 Predicted protein kina 99.9 1.5E-25 3.3E-30 146.6 6.6 137 1-141 132-282 (396)
7 KOG1095 Protein tyrosine kinas 99.9 1.1E-25 2.3E-30 168.1 5.4 135 1-154 833-968 (1025)
8 KOG0201 Serine/threonine prote 99.9 7.8E-26 1.7E-30 153.7 4.1 121 1-142 142-262 (467)
9 KOG0575 Polo-like serine/threo 99.9 2.9E-25 6.2E-30 156.1 6.1 120 1-142 149-268 (592)
10 KOG0578 p21-activated serine/t 99.9 3E-25 6.6E-30 154.8 5.9 123 1-142 400-522 (550)
11 KOG4257 Focal adhesion tyrosin 99.9 6.3E-25 1.4E-29 155.7 7.2 129 1-149 522-651 (974)
12 KOG1187 Serine/threonine prote 99.9 2.3E-24 5E-29 148.9 9.5 146 1-150 208-355 (361)
13 KOG0582 Ste20-like serine/thre 99.9 8.9E-25 1.9E-29 149.1 7.1 132 1-142 157-292 (516)
14 PHA02988 hypothetical protein; 99.9 1.3E-24 2.9E-29 146.6 7.3 126 1-149 154-281 (283)
15 cd05102 PTKc_VEGFR3 Catalytic 99.9 2.6E-24 5.7E-29 148.4 8.4 132 1-150 205-337 (338)
16 KOG4721 Serine/threonine prote 99.9 1.1E-24 2.4E-29 153.2 4.0 132 1-153 243-374 (904)
17 smart00750 KIND kinase non-cat 99.9 1.6E-23 3.5E-28 132.2 8.8 130 1-151 42-173 (176)
18 KOG0588 Serine/threonine prote 99.9 3.6E-24 7.7E-29 152.2 6.1 120 1-143 143-263 (786)
19 cd05048 PTKc_Ror Catalytic Dom 99.9 2E-23 4.4E-28 140.7 7.9 127 1-146 155-282 (283)
20 KOG0661 MAPK related serine/th 99.9 4.4E-23 9.5E-28 141.8 8.2 136 1-142 141-290 (538)
21 KOG0193 Serine/threonine prote 99.9 1.1E-23 2.5E-28 148.3 5.1 135 1-150 519-656 (678)
22 KOG0660 Mitogen-activated prot 99.9 3.5E-23 7.6E-28 137.9 6.1 140 1-142 156-309 (359)
23 cd05111 PTK_HER3 Pseudokinase 99.9 1.3E-22 2.9E-27 136.6 8.3 131 1-150 140-271 (279)
24 KOG0615 Serine/threonine prote 99.9 1E-23 2.2E-28 142.7 2.8 123 1-142 307-436 (475)
25 KOG0196 Tyrosine kinase, EPH ( 99.9 5.7E-24 1.2E-28 153.6 1.6 134 1-153 762-897 (996)
26 cd05054 PTKc_VEGFR Catalytic d 99.9 1.5E-22 3.2E-27 139.8 8.4 131 1-149 204-335 (337)
27 KOG0600 Cdc2-related protein k 99.9 7.6E-23 1.6E-27 141.5 6.5 139 1-142 249-399 (560)
28 cd05093 PTKc_TrkB Catalytic do 99.9 2.4E-22 5.1E-27 135.9 8.7 131 1-150 151-282 (288)
29 KOG0596 Dual specificity; seri 99.9 2.1E-23 4.5E-28 145.8 3.5 121 6-142 495-626 (677)
30 cd05094 PTKc_TrkC Catalytic do 99.9 2.8E-22 6E-27 135.8 8.7 131 1-150 154-285 (291)
31 KOG0198 MEKK and related serin 99.9 3.4E-23 7.3E-28 139.1 4.1 130 1-147 148-280 (313)
32 cd05106 PTKc_CSF-1R Catalytic 99.9 2.4E-22 5.2E-27 140.4 8.4 130 1-148 243-373 (374)
33 cd05043 PTK_Ryk Pseudokinase d 99.9 3.5E-22 7.5E-27 134.5 8.7 131 1-150 148-279 (280)
34 PTZ00283 serine/threonine prot 99.9 1.5E-22 3.3E-27 145.7 7.0 123 1-142 174-296 (496)
35 KOG0694 Serine/threonine prote 99.9 1.2E-22 2.7E-27 144.7 6.1 115 1-137 499-613 (694)
36 PF07714 Pkinase_Tyr: Protein 99.9 1.2E-22 2.6E-27 135.5 5.5 125 1-144 134-259 (259)
37 KOG0598 Ribosomal protein S6 k 99.9 7.1E-23 1.5E-27 136.8 4.2 114 1-135 156-269 (357)
38 cd05049 PTKc_Trk Catalytic dom 99.9 5.9E-22 1.3E-26 133.3 8.4 126 1-145 153-279 (280)
39 KOG0200 Fibroblast/platelet-de 99.9 6.1E-22 1.3E-26 145.3 8.8 131 1-149 449-581 (609)
40 KOG4278 Protein tyrosine kinas 99.9 3.3E-22 7.1E-27 142.4 7.1 128 2-149 397-525 (1157)
41 cd05035 PTKc_Axl_like Catalyti 99.9 9.1E-22 2E-26 131.9 8.9 128 1-147 144-272 (273)
42 KOG0659 Cdk activating kinase 99.9 7.3E-22 1.6E-26 127.2 7.8 138 1-142 132-280 (318)
43 cd05104 PTKc_Kit Catalytic dom 99.9 6.5E-22 1.4E-26 138.3 8.1 129 1-147 245-374 (375)
44 cd05096 PTKc_DDR1 Catalytic do 99.9 9.4E-22 2E-26 134.0 8.7 133 1-145 169-303 (304)
45 cd05075 PTKc_Axl Catalytic dom 99.9 1.1E-21 2.4E-26 131.5 8.8 128 1-147 143-271 (272)
46 cd05091 PTKc_Ror2 Catalytic do 99.9 6.2E-22 1.3E-26 133.5 7.4 127 1-146 155-282 (283)
47 cd05109 PTKc_HER2 Catalytic do 99.9 1.5E-21 3.3E-26 131.4 8.7 132 1-151 140-272 (279)
48 PTZ00267 NIMA-related protein 99.9 6.4E-22 1.4E-26 142.1 7.1 123 1-142 200-322 (478)
49 cd05108 PTKc_EGFR Catalytic do 99.9 8.1E-22 1.8E-26 135.0 7.2 132 1-151 140-272 (316)
50 PHA02882 putative serine/threo 99.9 1.1E-21 2.3E-26 133.2 7.7 132 1-144 157-293 (294)
51 cd05101 PTKc_FGFR2 Catalytic d 99.9 2.6E-21 5.7E-26 131.8 9.6 132 1-151 168-300 (304)
52 cd05045 PTKc_RET Catalytic dom 99.9 2.1E-21 4.5E-26 131.4 8.7 130 1-149 158-288 (290)
53 KOG0597 Serine-threonine prote 99.9 3E-22 6.5E-27 140.8 4.7 119 1-141 131-249 (808)
54 cd05053 PTKc_FGFR Catalytic do 99.9 1.3E-21 2.7E-26 132.6 7.7 129 1-148 163-292 (293)
55 KOG0583 Serine/threonine prote 99.9 8E-22 1.7E-26 136.6 6.7 119 1-141 151-273 (370)
56 cd08228 STKc_Nek6 Catalytic do 99.9 2.4E-21 5.3E-26 129.5 8.7 130 1-148 137-266 (267)
57 KOG0199 ACK and related non-re 99.9 9.1E-22 2E-26 141.3 6.9 125 1-144 243-369 (1039)
58 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 8.4E-22 1.8E-26 132.9 6.5 140 1-148 138-282 (283)
59 cd07862 STKc_CDK6 Catalytic do 99.9 1.4E-21 3.1E-26 132.2 7.5 137 1-142 141-286 (290)
60 cd05092 PTKc_TrkA Catalytic do 99.9 1.9E-21 4.2E-26 131.0 8.0 126 1-145 153-279 (280)
61 cd05098 PTKc_FGFR1 Catalytic d 99.9 3.5E-21 7.5E-26 131.4 9.4 134 1-153 171-305 (307)
62 KOG0033 Ca2+/calmodulin-depend 99.9 7.4E-22 1.6E-26 126.3 5.6 116 7-142 150-266 (355)
63 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.9E-21 4.1E-26 136.8 7.9 131 1-149 268-399 (400)
64 KOG0983 Mitogen-activated prot 99.9 7.1E-22 1.5E-26 128.2 5.1 123 1-142 223-348 (391)
65 cd05062 PTKc_IGF-1R Catalytic 99.9 2.2E-21 4.9E-26 130.5 7.8 126 1-145 150-276 (277)
66 cd07859 STKc_TDY_MAPK_plant Ca 99.9 1.2E-21 2.5E-26 135.2 6.5 140 1-142 134-289 (338)
67 cd07848 STKc_CDKL5 Catalytic d 99.9 1.6E-21 3.4E-26 131.8 6.7 139 1-142 131-283 (287)
68 cd05099 PTKc_FGFR4 Catalytic d 99.9 4E-21 8.7E-26 131.4 8.6 135 1-154 165-300 (314)
69 cd05032 PTKc_InsR_like Catalyt 99.8 1.1E-21 2.3E-26 131.9 5.4 126 1-145 150-276 (277)
70 cd05052 PTKc_Abl Catalytic dom 99.8 4.7E-21 1E-25 128.0 8.5 127 1-147 135-262 (263)
71 cd05116 PTKc_Syk Catalytic dom 99.8 4.9E-21 1.1E-25 127.5 8.4 128 1-147 126-255 (257)
72 cd05055 PTKc_PDGFR Catalytic d 99.8 2.8E-21 6.1E-26 131.6 7.4 129 1-147 172-301 (302)
73 KOG2052 Activin A type IB rece 99.8 6.6E-21 1.4E-25 130.4 9.0 142 1-150 347-506 (513)
74 cd05110 PTKc_HER4 Catalytic do 99.8 6.3E-21 1.4E-25 129.9 8.8 132 1-151 140-272 (303)
75 cd05060 PTKc_Syk_like Catalyti 99.8 3.9E-21 8.4E-26 128.0 7.5 129 1-148 126-256 (257)
76 cd05090 PTKc_Ror1 Catalytic do 99.8 5.2E-21 1.1E-25 129.1 8.2 127 1-146 155-282 (283)
77 cd05051 PTKc_DDR Catalytic dom 99.8 2.4E-21 5.3E-26 131.4 6.4 133 1-145 161-295 (296)
78 cd08229 STKc_Nek7 Catalytic do 99.8 8.6E-21 1.9E-25 126.9 9.0 129 1-147 137-265 (267)
79 cd05058 PTKc_Met_Ron Catalytic 99.8 5E-21 1.1E-25 127.7 7.6 130 1-149 129-261 (262)
80 KOG0658 Glycogen synthase kina 99.8 2.2E-21 4.9E-26 129.6 5.7 137 1-141 156-304 (364)
81 cd05033 PTKc_EphR Catalytic do 99.8 8.9E-21 1.9E-25 126.8 8.7 128 1-147 137-265 (266)
82 KOG1094 Discoidin domain recep 99.8 1.6E-21 3.4E-26 137.5 5.2 135 1-147 668-804 (807)
83 KOG1024 Receptor-like protein 99.8 2.7E-21 5.8E-26 131.0 5.9 131 2-151 428-559 (563)
84 PTZ00036 glycogen synthase kin 99.8 3.7E-21 8E-26 136.9 7.0 144 1-148 201-358 (440)
85 cd05631 STKc_GRK4 Catalytic do 99.8 4.5E-21 9.9E-26 129.5 7.1 130 1-149 133-269 (285)
86 cd07869 STKc_PFTAIRE1 Catalyti 99.8 7E-21 1.5E-25 129.6 7.9 140 1-142 134-287 (303)
87 KOG0589 Serine/threonine prote 99.8 1.8E-21 3.9E-26 134.5 4.9 122 1-143 137-258 (426)
88 cd07874 STKc_JNK3 Catalytic do 99.8 7.1E-21 1.5E-25 132.3 7.9 139 1-143 150-311 (355)
89 cd07875 STKc_JNK1 Catalytic do 99.8 6.4E-21 1.4E-25 132.9 7.6 137 1-142 157-317 (364)
90 PLN00034 mitogen-activated pro 99.8 1.2E-20 2.6E-25 131.1 8.9 125 1-143 199-328 (353)
91 cd05148 PTKc_Srm_Brk Catalytic 99.8 3.6E-21 7.7E-26 128.4 6.1 126 1-147 135-261 (261)
92 cd05050 PTKc_Musk Catalytic do 99.8 9.3E-21 2E-25 128.1 8.1 127 1-146 161-288 (288)
93 cd07876 STKc_JNK2 Catalytic do 99.8 8E-21 1.7E-25 132.2 8.0 138 1-142 154-314 (359)
94 cd05089 PTKc_Tie1 Catalytic do 99.8 1.5E-20 3.3E-25 127.7 9.1 129 1-151 150-279 (297)
95 cd05072 PTKc_Lyn Catalytic dom 99.8 9.2E-21 2E-25 126.4 7.8 126 1-146 134-260 (261)
96 KOG0579 Ste20-like serine/thre 99.8 3.8E-21 8.3E-26 137.3 6.2 123 1-142 161-288 (1187)
97 cd05082 PTKc_Csk Catalytic dom 99.8 8.4E-21 1.8E-25 126.3 7.4 123 1-147 133-256 (256)
98 cd05103 PTKc_VEGFR2 Catalytic 99.8 1.3E-20 2.8E-25 130.4 8.5 132 1-150 210-342 (343)
99 KOG0592 3-phosphoinositide-dep 99.8 6.5E-21 1.4E-25 133.1 7.0 122 1-142 205-337 (604)
100 cd06649 PKc_MEK2 Catalytic dom 99.8 1.2E-20 2.6E-25 130.0 8.2 136 1-143 135-301 (331)
101 KOG0194 Protein tyrosine kinas 99.8 1.3E-21 2.8E-26 137.3 3.4 133 1-153 293-426 (474)
102 cd08224 STKc_Nek6_Nek7 Catalyt 99.8 2.1E-20 4.6E-25 124.9 9.1 130 1-148 137-266 (267)
103 cd00192 PTKc Catalytic domain 99.8 1.2E-20 2.5E-25 125.6 7.8 126 1-145 136-262 (262)
104 cd05107 PTKc_PDGFR_beta Cataly 99.8 1.4E-20 3.1E-25 132.4 8.3 130 1-148 270-400 (401)
105 cd05100 PTKc_FGFR3 Catalytic d 99.8 2.3E-20 4.9E-25 128.8 9.2 132 1-151 165-297 (334)
106 PTZ00284 protein kinase; Provi 99.8 1.5E-20 3.2E-25 134.9 8.5 128 8-142 286-437 (467)
107 KOG0599 Phosphorylase kinase g 99.8 4E-21 8.6E-26 124.8 5.0 123 1-142 154-282 (411)
108 KOG2345 Serine/threonine prote 99.8 5.9E-21 1.3E-25 122.0 5.7 132 1-148 160-301 (302)
109 cd05068 PTKc_Frk_like Catalyti 99.8 2.2E-20 4.9E-25 124.6 8.7 126 1-146 134-260 (261)
110 cd05095 PTKc_DDR2 Catalytic do 99.8 7.8E-21 1.7E-25 129.0 6.5 133 1-145 161-295 (296)
111 cd05040 PTKc_Ack_like Catalyti 99.8 1E-20 2.2E-25 125.9 6.9 127 1-145 128-256 (257)
112 cd05571 STKc_PKB Catalytic dom 99.8 2.5E-21 5.4E-26 133.0 4.0 120 1-142 126-250 (323)
113 cd05057 PTKc_EGFR_like Catalyt 99.8 2.3E-20 5.1E-25 125.6 8.5 132 1-151 140-272 (279)
114 cd05064 PTKc_EphR_A10 Catalyti 99.8 2.1E-20 4.6E-25 125.1 8.2 127 1-147 138-265 (266)
115 cd05084 PTKc_Fes Catalytic dom 99.8 2.4E-20 5.2E-25 123.8 8.4 126 1-145 125-251 (252)
116 cd05097 PTKc_DDR_like Catalyti 99.8 3.1E-20 6.8E-25 126.0 9.1 133 1-145 160-294 (295)
117 cd05061 PTKc_InsR Catalytic do 99.8 2.3E-20 5E-25 126.3 8.4 129 1-148 150-279 (288)
118 cd05044 PTKc_c-ros Catalytic d 99.8 2.5E-20 5.4E-25 124.8 8.5 126 1-145 137-268 (269)
119 cd05047 PTKc_Tie Catalytic dom 99.8 1.5E-20 3.3E-25 126.0 7.4 126 1-148 143-269 (270)
120 cd05115 PTKc_Zap-70 Catalytic 99.8 2.2E-20 4.7E-25 124.5 8.1 128 1-147 126-255 (257)
121 PHA03207 serine/threonine kina 99.8 2.3E-20 5E-25 131.3 8.6 143 1-143 216-375 (392)
122 cd06637 STKc_TNIK Catalytic do 99.8 1.3E-20 2.9E-25 126.3 6.9 122 1-142 142-268 (272)
123 cd05056 PTKc_FAK Catalytic dom 99.8 4.4E-20 9.5E-25 123.7 9.4 130 1-150 138-268 (270)
124 cd07863 STKc_CDK4 Catalytic do 99.8 2.2E-20 4.7E-25 126.2 7.9 138 1-142 139-284 (288)
125 cd05074 PTKc_Tyro3 Catalytic d 99.8 2.5E-20 5.5E-25 125.0 8.2 128 1-147 144-272 (273)
126 cd07871 STKc_PCTAIRE3 Catalyti 99.8 3E-20 6.5E-25 125.7 8.6 137 1-142 134-284 (288)
127 cd05070 PTKc_Fyn_Yrk Catalytic 99.8 3E-20 6.6E-25 123.9 8.3 126 1-146 133-259 (260)
128 cd05041 PTKc_Fes_like Catalyti 99.8 1.6E-20 3.5E-25 124.5 6.9 126 1-145 124-250 (251)
129 cd05063 PTKc_EphR_A2 Catalytic 99.8 3.6E-20 7.9E-25 124.0 8.6 128 1-147 138-267 (268)
130 KOG0584 Serine/threonine prote 99.8 4.1E-21 8.9E-26 135.8 4.2 119 1-142 176-295 (632)
131 cd06643 STKc_SLK Catalytic dom 99.8 1.2E-20 2.6E-25 127.2 6.3 123 1-142 134-261 (282)
132 cd05114 PTKc_Tec_Rlk Catalytic 99.8 3.6E-20 7.9E-25 123.3 8.3 124 1-144 131-255 (256)
133 cd05071 PTKc_Src Catalytic dom 99.8 4E-20 8.6E-25 123.5 8.4 127 1-147 133-260 (262)
134 cd05584 STKc_p70S6K Catalytic 99.8 8.8E-21 1.9E-25 130.3 5.4 120 1-142 131-255 (323)
135 cd05113 PTKc_Btk_Bmx Catalytic 99.8 2.6E-20 5.6E-25 124.1 7.4 125 1-145 131-256 (256)
136 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.8 2.4E-20 5.1E-25 125.0 7.2 130 1-145 131-268 (269)
137 cd05585 STKc_YPK1_like Catalyt 99.8 3.6E-21 7.8E-26 131.6 3.3 119 1-141 124-245 (312)
138 KOG0663 Protein kinase PITSLRE 99.8 3.1E-20 6.6E-25 123.3 7.4 138 1-142 208-360 (419)
139 cd06650 PKc_MEK1 Catalytic dom 99.8 1.9E-20 4.2E-25 129.1 6.8 70 1-74 135-204 (333)
140 cd07868 STKc_CDK8 Catalytic do 99.8 8.4E-20 1.8E-24 125.0 9.8 71 4-74 146-218 (317)
141 cd05069 PTKc_Yes Catalytic dom 99.8 6.3E-20 1.4E-24 122.4 9.0 126 1-146 133-259 (260)
142 cd05589 STKc_PKN Catalytic dom 99.8 1.3E-20 2.7E-25 129.5 5.7 120 1-142 132-256 (324)
143 PHA03212 serine/threonine kina 99.8 4E-20 8.7E-25 129.9 8.3 141 1-142 213-375 (391)
144 cd05036 PTKc_ALK_LTK Catalytic 99.8 2.8E-20 6.1E-25 125.2 7.2 126 1-145 147-276 (277)
145 cd05059 PTKc_Tec_like Catalyti 99.8 4.8E-20 1E-24 122.7 8.2 124 1-144 131-255 (256)
146 cd05088 PTKc_Tie2 Catalytic do 99.8 2E-20 4.4E-25 127.4 6.4 130 1-152 155-285 (303)
147 cd06612 STKc_MST1_2 Catalytic 99.8 2.3E-20 5E-25 124.0 6.5 123 1-142 130-252 (256)
148 cd05592 STKc_nPKC_theta_delta 99.8 1.2E-20 2.6E-25 129.3 5.2 119 1-141 127-246 (316)
149 KOG0594 Protein kinase PCTAIRE 99.8 3.6E-20 7.9E-25 123.4 7.3 138 1-142 151-301 (323)
150 cd06625 STKc_MEKK3_like Cataly 99.8 3.7E-20 8E-25 123.6 7.2 125 1-143 135-260 (263)
151 cd05593 STKc_PKB_gamma Catalyt 99.8 1.3E-20 2.9E-25 129.6 5.1 120 1-142 126-250 (328)
152 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.8 3.7E-20 8.1E-25 124.9 7.2 142 1-147 139-283 (284)
153 cd08529 STKc_FA2-like Catalyti 99.8 5.9E-20 1.3E-24 122.1 7.9 122 1-143 132-253 (256)
154 cd05570 STKc_PKC Catalytic dom 99.8 1.6E-20 3.4E-25 128.8 5.0 120 1-142 127-251 (318)
155 cd06616 PKc_MKK4 Catalytic dom 99.8 2.2E-20 4.8E-25 126.2 5.7 125 1-142 139-266 (288)
156 cd05590 STKc_nPKC_eta Catalyti 99.8 1.3E-20 2.9E-25 129.2 4.6 115 1-137 127-241 (320)
157 cd05612 STKc_PRKX_like Catalyt 99.8 1.6E-20 3.5E-25 127.2 5.0 117 1-142 132-253 (291)
158 cd07853 STKc_NLK Catalytic dom 99.8 4E-20 8.6E-25 129.3 7.0 139 1-142 134-287 (372)
159 cd05065 PTKc_EphR_B Catalytic 99.8 8.4E-20 1.8E-24 122.3 8.3 128 1-147 137-268 (269)
160 cd06655 STKc_PAK2 Catalytic do 99.8 4.3E-20 9.3E-25 125.4 6.9 123 1-142 146-268 (296)
161 cd06654 STKc_PAK1 Catalytic do 99.8 4.7E-20 1E-24 125.3 7.1 123 1-142 147-269 (296)
162 PTZ00263 protein kinase A cata 99.8 1.2E-20 2.6E-25 129.9 4.1 116 1-141 149-269 (329)
163 cd05595 STKc_PKB_beta Catalyti 99.8 2.1E-20 4.6E-25 128.4 5.2 120 1-142 126-250 (323)
164 cd07878 STKc_p38beta_MAPK11 Ca 99.8 7.6E-20 1.6E-24 126.6 8.0 135 1-142 149-297 (343)
165 cd07867 STKc_CDC2L6 Catalytic 99.8 1.5E-19 3.3E-24 123.7 9.3 71 4-74 146-218 (317)
166 cd06644 STKc_STK10_LOK Catalyt 99.8 6.5E-20 1.4E-24 124.3 7.2 123 1-142 141-268 (292)
167 cd05600 STKc_Sid2p_Dbf2p Catal 99.8 1.8E-20 4E-25 129.2 4.5 126 1-143 132-257 (333)
168 cd05085 PTKc_Fer Catalytic dom 99.8 1.1E-19 2.3E-24 120.5 8.0 125 1-145 124-249 (250)
169 cd05067 PTKc_Lck_Blk Catalytic 99.8 1E-19 2.3E-24 121.3 7.9 126 1-146 133-259 (260)
170 cd05591 STKc_nPKC_epsilon Cata 99.8 1.7E-20 3.8E-25 128.7 4.2 120 1-142 127-253 (321)
171 KOG1989 ARK protein kinase fam 99.8 8.4E-20 1.8E-24 133.2 7.9 128 1-150 177-314 (738)
172 KOG4279 Serine/threonine prote 99.8 1.1E-20 2.4E-25 136.1 3.3 118 5-142 711-831 (1226)
173 cd06613 STKc_MAP4K3_like Catal 99.8 1.1E-19 2.3E-24 121.2 7.9 125 1-142 132-259 (262)
174 cd05607 STKc_GRK7 Catalytic do 99.8 4.7E-20 1E-24 124.1 6.1 123 1-141 126-248 (277)
175 cd06609 STKc_MST3_like Catalyt 99.8 8.4E-20 1.8E-24 122.6 7.3 122 1-142 129-250 (274)
176 cd05608 STKc_GRK1 Catalytic do 99.8 5.5E-20 1.2E-24 124.0 6.4 124 1-142 128-256 (280)
177 cd05616 STKc_cPKC_beta Catalyt 99.8 2.1E-20 4.6E-25 128.3 4.5 115 1-137 132-246 (323)
178 cd08528 STKc_Nek10 Catalytic d 99.8 7.6E-20 1.6E-24 122.5 7.0 124 1-145 145-268 (269)
179 cd05039 PTKc_Csk_like Catalyti 99.8 1.2E-19 2.6E-24 120.7 7.9 123 1-147 133-256 (256)
180 cd05614 STKc_MSK2_N N-terminal 99.8 2.5E-20 5.4E-25 128.5 4.7 125 1-142 136-266 (332)
181 cd05038 PTKc_Jak_rpt2 Catalyti 99.8 8.3E-20 1.8E-24 123.1 7.1 143 1-147 140-283 (284)
182 PHA03210 serine/threonine kina 99.8 1.5E-19 3.3E-24 130.5 8.7 141 1-142 298-453 (501)
183 cd05079 PTKc_Jak1_rpt2 Catalyt 99.8 7.8E-20 1.7E-24 123.4 6.8 142 1-147 140-283 (284)
184 PLN00113 leucine-rich repeat r 99.8 3.1E-19 6.7E-24 137.7 10.8 141 1-151 814-955 (968)
185 PHA03211 serine/threonine kina 99.8 9.9E-20 2.1E-24 129.9 7.5 143 1-143 291-455 (461)
186 cd05605 STKc_GRK4_like Catalyt 99.8 9.5E-20 2.1E-24 123.1 7.1 123 1-142 133-260 (285)
187 cd06646 STKc_MAP4K5 Catalytic 99.8 5.1E-20 1.1E-24 123.2 5.7 127 1-144 137-266 (267)
188 cd06610 STKc_OSR1_SPAK Catalyt 99.8 6.9E-20 1.5E-24 122.4 6.3 128 1-142 133-263 (267)
189 cd06619 PKc_MKK5 Catalytic dom 99.8 8.8E-20 1.9E-24 122.9 6.9 126 1-143 126-253 (279)
190 cd06636 STKc_MAP4K4_6 Catalyti 99.8 6.1E-20 1.3E-24 123.8 6.0 122 1-142 152-278 (282)
191 cd05619 STKc_nPKC_theta Cataly 99.8 4.4E-20 9.4E-25 126.5 5.2 119 1-141 127-246 (316)
192 cd05620 STKc_nPKC_delta Cataly 99.8 4.1E-20 8.9E-25 126.6 5.1 119 1-141 127-246 (316)
193 cd05587 STKc_cPKC Catalytic do 99.8 3.8E-20 8.2E-25 127.2 4.9 115 1-137 132-246 (324)
194 cd05112 PTKc_Itk Catalytic dom 99.8 1.8E-19 4E-24 119.8 8.0 124 1-144 131-255 (256)
195 KOG0671 LAMMER dual specificit 99.8 1.7E-20 3.7E-25 126.1 3.0 133 5-142 247-405 (415)
196 cd05066 PTKc_EphR_A Catalytic 99.8 1.3E-19 2.9E-24 121.3 7.3 128 1-147 137-266 (267)
197 cd06608 STKc_myosinIII_like Ca 99.8 9.9E-20 2.1E-24 122.1 6.7 123 1-142 144-271 (275)
198 cd05618 STKc_aPKC_iota Catalyt 99.8 5.1E-20 1.1E-24 126.8 5.3 121 1-137 127-250 (329)
199 cd05575 STKc_SGK Catalytic dom 99.8 2.3E-20 4.9E-25 128.2 3.5 116 1-138 127-242 (323)
200 cd05042 PTKc_Aatyk Catalytic d 99.8 1.2E-19 2.7E-24 121.5 7.0 129 1-144 131-267 (269)
201 cd08217 STKc_Nek2 Catalytic do 99.8 2.7E-19 5.9E-24 119.3 8.6 121 1-142 141-261 (265)
202 KOG3653 Transforming growth fa 99.8 1.5E-19 3.2E-24 124.6 7.3 151 1-151 347-507 (534)
203 cd06640 STKc_MST4 Catalytic do 99.8 2.6E-19 5.6E-24 120.5 8.4 122 1-143 132-253 (277)
204 cd06658 STKc_PAK5 Catalytic do 99.8 7.7E-20 1.7E-24 124.0 5.9 124 1-143 149-272 (292)
205 KOG0574 STE20-like serine/thre 99.8 7.3E-21 1.6E-25 125.3 0.8 122 1-142 160-282 (502)
206 cd06638 STKc_myosinIIIA Cataly 99.8 1.3E-19 2.7E-24 122.4 6.9 124 1-143 155-283 (286)
207 cd06645 STKc_MAP4K3 Catalytic 99.8 1.5E-19 3.2E-24 121.0 7.1 125 1-142 137-264 (267)
208 cd05034 PTKc_Src_like Catalyti 99.8 1.6E-19 3.5E-24 120.4 7.2 126 1-146 134-260 (261)
209 cd06621 PKc_MAPKK_Pek1_like Ca 99.8 4.9E-19 1.1E-23 119.8 9.5 130 1-142 136-265 (287)
210 cd06639 STKc_myosinIIIB Cataly 99.8 1.3E-19 2.9E-24 122.7 6.8 123 1-142 159-286 (291)
211 cd05086 PTKc_Aatyk2 Catalytic 99.8 3.2E-19 7E-24 119.5 8.6 129 1-144 130-266 (268)
212 cd06605 PKc_MAPKK Catalytic do 99.8 1.4E-19 3.1E-24 120.8 6.8 125 1-142 132-256 (265)
213 PF00069 Pkinase: Protein kina 99.8 1.7E-19 3.6E-24 120.1 7.0 127 1-142 129-256 (260)
214 cd05602 STKc_SGK1 Catalytic do 99.8 1.8E-20 3.8E-25 128.9 2.4 118 1-140 127-244 (325)
215 cd06659 STKc_PAK6 Catalytic do 99.8 9.2E-20 2E-24 123.9 5.8 124 1-143 148-271 (297)
216 cd05594 STKc_PKB_alpha Catalyt 99.8 9.3E-21 2E-25 130.2 1.0 120 1-142 127-251 (325)
217 cd06656 STKc_PAK3 Catalytic do 99.8 1.5E-19 3.2E-24 122.9 6.8 123 1-142 146-268 (297)
218 cd06651 STKc_MEKK3 Catalytic d 99.8 1.8E-19 3.8E-24 120.6 7.1 123 1-142 137-260 (266)
219 cd05073 PTKc_Hck Catalytic dom 99.8 3.1E-19 6.8E-24 119.0 8.2 126 1-146 133-259 (260)
220 PHA03209 serine/threonine kina 99.8 1.5E-19 3.2E-24 125.7 6.8 69 1-72 188-256 (357)
221 cd07872 STKc_PCTAIRE2 Catalyti 99.8 3.1E-19 6.8E-24 121.9 8.2 143 1-147 135-292 (309)
222 PTZ00426 cAMP-dependent protei 99.8 4.5E-20 9.7E-25 127.6 4.1 117 1-142 162-283 (340)
223 cd05588 STKc_aPKC Catalytic do 99.8 9.4E-20 2E-24 125.5 5.6 125 1-141 127-260 (329)
224 cd08219 STKc_Nek3 Catalytic do 99.8 1.3E-19 2.9E-24 120.4 6.1 122 1-143 131-252 (255)
225 cd07861 STKc_CDK1_euk Catalyti 99.8 5.2E-19 1.1E-23 119.3 9.0 139 1-142 132-281 (285)
226 cd06628 STKc_MAPKKK_Byr2_like 99.8 4.1E-19 8.9E-24 118.8 8.4 123 1-142 137-263 (267)
227 cd07839 STKc_CDK5 Catalytic do 99.8 3.2E-19 6.9E-24 120.3 7.9 140 1-142 130-280 (284)
228 cd05083 PTKc_Chk Catalytic dom 99.8 1.6E-19 3.4E-24 120.1 6.3 122 1-146 131-253 (254)
229 KOG0577 Serine/threonine prote 99.8 1.5E-19 3.2E-24 128.2 6.4 118 1-142 157-277 (948)
230 cd08223 STKc_Nek4 Catalytic do 99.8 4.5E-19 9.7E-24 118.0 8.4 121 1-142 133-253 (257)
231 cd06617 PKc_MKK3_6 Catalytic d 99.8 2.5E-19 5.5E-24 120.7 7.3 122 1-142 135-260 (283)
232 cd07833 STKc_CDKL Catalytic do 99.8 4.5E-19 9.7E-24 119.8 8.4 141 1-142 131-284 (288)
233 cd06631 STKc_YSK4 Catalytic do 99.8 2.4E-19 5.2E-24 119.8 7.0 125 1-142 133-261 (265)
234 cd08221 STKc_Nek9 Catalytic do 99.8 2.5E-19 5.4E-24 119.2 7.0 122 1-143 132-253 (256)
235 cd06620 PKc_MAPKK_Byr1_like Ca 99.8 1.6E-19 3.6E-24 121.8 6.2 127 1-144 135-267 (284)
236 cd06642 STKc_STK25-YSK1 Cataly 99.8 3.6E-19 7.8E-24 119.8 7.7 121 1-142 132-252 (277)
237 cd06618 PKc_MKK7 Catalytic dom 99.8 2E-19 4.4E-24 122.1 6.6 124 1-143 146-273 (296)
238 cd07846 STKc_CDKL2_3 Catalytic 99.8 3.9E-19 8.6E-24 120.0 7.9 139 1-142 131-282 (286)
239 smart00219 TyrKc Tyrosine kina 99.8 4.5E-19 9.8E-24 117.9 7.8 124 1-144 134-258 (258)
240 cd06648 STKc_PAK_II Catalytic 99.8 1.7E-19 3.7E-24 121.9 5.8 123 1-142 146-268 (285)
241 cd05118 STKc_CMGC Catalytic do 99.8 8.9E-19 1.9E-23 118.0 9.3 138 1-142 129-279 (283)
242 cd07847 STKc_CDKL1_4 Catalytic 99.8 4.5E-19 9.7E-24 119.7 7.8 138 1-142 131-282 (286)
243 cd07873 STKc_PCTAIRE1 Catalyti 99.8 4.6E-19 1E-23 120.6 7.8 146 1-150 135-295 (301)
244 cd07850 STKc_JNK Catalytic dom 99.8 6.1E-19 1.3E-23 122.5 8.5 137 1-142 149-310 (353)
245 cd05573 STKc_ROCK_NDR_like Cat 99.8 6.2E-20 1.3E-24 127.2 3.4 126 1-143 132-285 (350)
246 cd06615 PKc_MEK Catalytic doma 99.8 5.2E-19 1.1E-23 120.8 7.9 136 1-143 131-287 (308)
247 PRK13184 pknD serine/threonine 99.8 4E-19 8.6E-24 133.6 7.8 132 1-149 144-292 (932)
248 KOG0616 cAMP-dependent protein 99.8 9.4E-20 2E-24 119.2 3.9 70 1-75 175-244 (355)
249 KOG0585 Ca2+/calmodulin-depend 99.8 1.4E-19 2.9E-24 125.0 4.8 125 1-143 241-372 (576)
250 cd07838 STKc_CDK4_6_like Catal 99.8 9.3E-19 2E-23 118.1 8.9 138 1-142 138-283 (287)
251 cd07831 STKc_MOK Catalytic dom 99.8 8.8E-19 1.9E-23 118.0 8.7 135 1-142 131-278 (282)
252 cd06611 STKc_SLK_like Catalyti 99.8 2.5E-19 5.5E-24 120.7 5.9 124 1-143 134-262 (280)
253 cd05617 STKc_aPKC_zeta Catalyt 99.8 2E-19 4.3E-24 123.8 5.5 121 1-137 127-248 (327)
254 KOG4717 Serine/threonine prote 99.8 4.5E-19 9.7E-24 124.2 7.1 117 2-141 151-268 (864)
255 cd05122 PKc_STE Catalytic doma 99.8 3.4E-19 7.4E-24 117.9 6.0 122 1-142 129-250 (253)
256 cd05603 STKc_SGK2 Catalytic do 99.8 6.5E-20 1.4E-24 125.9 2.6 116 1-138 127-242 (321)
257 cd06917 STKc_NAK1_like Catalyt 99.8 6.6E-19 1.4E-23 118.4 7.4 122 1-142 132-254 (277)
258 KOG0605 NDR and related serine 99.8 1.9E-19 4.1E-24 125.5 4.7 86 32-136 348-435 (550)
259 cd06629 STKc_MAPKKK_Bck1_like 99.8 5.1E-19 1.1E-23 118.7 6.7 128 1-142 139-268 (272)
260 KOG1025 Epidermal growth facto 99.8 2.9E-19 6.4E-24 130.5 5.9 132 1-151 829-961 (1177)
261 cd05632 STKc_GRK5 Catalytic do 99.8 7.3E-19 1.6E-23 118.8 7.5 123 1-142 133-260 (285)
262 cd08218 STKc_Nek1 Catalytic do 99.8 3.4E-19 7.3E-24 118.5 5.7 121 1-142 132-252 (256)
263 cd06647 STKc_PAK_I Catalytic d 99.8 6.8E-19 1.5E-23 119.4 7.2 123 1-142 146-268 (293)
264 cd05604 STKc_SGK3 Catalytic do 99.8 4.1E-20 8.8E-25 127.1 1.3 116 1-138 127-242 (325)
265 cd05601 STKc_CRIK Catalytic do 99.8 4.7E-20 1E-24 127.0 1.5 124 1-142 133-262 (330)
266 cd07849 STKc_ERK1_2_like Catal 99.8 1.1E-18 2.3E-23 120.6 8.2 141 1-143 137-292 (336)
267 cd05630 STKc_GRK6 Catalytic do 99.8 5.2E-19 1.1E-23 119.6 6.5 123 1-142 133-260 (285)
268 cd07870 STKc_PFTAIRE2 Catalyti 99.8 1.2E-18 2.6E-23 118.0 8.3 139 1-142 134-287 (291)
269 cd06607 STKc_TAO Catalytic dom 99.8 7.8E-19 1.7E-23 119.8 7.4 118 1-142 146-266 (307)
270 cd07865 STKc_CDK9 Catalytic do 99.8 1.1E-18 2.3E-23 119.1 8.1 142 1-142 150-306 (310)
271 cd05582 STKc_RSK_N N-terminal 99.8 3.4E-20 7.4E-25 127.1 0.7 117 1-139 129-245 (318)
272 cd06624 STKc_ASK Catalytic dom 99.8 1.2E-18 2.7E-23 116.6 8.1 123 1-142 139-264 (268)
273 KOG4645 MAPKKK (MAP kinase kin 99.8 8.5E-20 1.8E-24 138.1 2.6 125 1-143 1365-1494(1509)
274 cd05633 STKc_GRK3 Catalytic do 99.8 1.1E-18 2.4E-23 117.6 7.7 121 1-142 128-254 (279)
275 cd07860 STKc_CDK2_3 Catalytic 99.8 1.2E-18 2.5E-23 117.6 7.5 139 1-142 131-280 (284)
276 cd06623 PKc_MAPKK_plant_like C 99.8 2.3E-18 5E-23 114.9 8.7 124 1-142 131-255 (264)
277 KOG0603 Ribosomal protein S6 k 99.8 7E-19 1.5E-23 124.9 6.5 116 1-142 446-562 (612)
278 KOG0595 Serine/threonine-prote 99.8 1.7E-19 3.8E-24 122.2 3.2 67 7-76 152-218 (429)
279 cd08220 STKc_Nek8 Catalytic do 99.8 2E-18 4.4E-23 114.7 8.4 120 1-142 132-252 (256)
280 cd05615 STKc_cPKC_alpha Cataly 99.8 4.2E-19 9.1E-24 122.0 5.2 115 1-137 132-246 (323)
281 KOG0690 Serine/threonine prote 99.8 5E-19 1.1E-23 117.8 5.3 114 1-136 299-412 (516)
282 cd05609 STKc_MAST Catalytic do 99.8 6.7E-19 1.5E-23 120.0 6.1 127 1-144 132-271 (305)
283 cd06622 PKc_MAPKK_PBS2_like Ca 99.8 2.5E-18 5.4E-23 116.2 8.8 122 1-142 134-261 (286)
284 cd07852 STKc_MAPK15 Catalytic 99.8 1E-18 2.2E-23 120.7 6.9 141 1-143 138-295 (337)
285 KOG0611 Predicted serine/threo 99.8 6.1E-19 1.3E-23 120.4 5.5 117 1-141 184-301 (668)
286 cd06657 STKc_PAK4 Catalytic do 99.8 1.1E-18 2.3E-23 118.4 6.7 123 1-142 147-269 (292)
287 cd05596 STKc_ROCK Catalytic do 99.8 4.1E-19 8.9E-24 124.1 4.8 125 1-142 173-303 (370)
288 KOG0986 G protein-coupled rece 99.8 5.6E-19 1.2E-23 121.6 5.2 118 1-137 318-435 (591)
289 cd07855 STKc_ERK5 Catalytic do 99.8 1.9E-18 4.2E-23 119.2 7.9 140 1-142 138-293 (334)
290 cd07858 STKc_TEY_MAPK_plant Ca 99.8 1.2E-18 2.5E-23 120.4 6.7 146 1-150 139-300 (337)
291 cd06626 STKc_MEKK4 Catalytic d 99.8 2.1E-18 4.6E-23 115.1 7.8 126 1-142 130-260 (264)
292 KOG0667 Dual-specificity tyros 99.8 1.1E-18 2.5E-23 124.0 6.7 64 7-75 328-391 (586)
293 PHA03390 pk1 serine/threonine- 99.8 2E-18 4.3E-23 115.7 7.6 120 1-142 140-261 (267)
294 cd07845 STKc_CDK10 Catalytic d 99.8 2.5E-18 5.5E-23 117.4 8.2 138 1-142 139-289 (309)
295 cd05037 PTK_Jak_rpt1 Pseudokin 99.8 2.1E-18 4.6E-23 114.8 7.7 118 1-145 132-259 (259)
296 cd06614 STKc_PAK Catalytic dom 99.8 9.9E-19 2.1E-23 118.1 6.1 123 1-142 147-269 (286)
297 cd08216 PK_STRAD Pseudokinase 99.8 3.1E-18 6.7E-23 117.2 8.6 141 1-142 132-294 (314)
298 KOG1006 Mitogen-activated prot 99.8 8.8E-20 1.9E-24 118.0 0.8 123 1-142 199-326 (361)
299 cd07834 STKc_MAPK Catalytic do 99.8 4.1E-18 8.9E-23 117.3 9.1 148 1-150 134-298 (330)
300 cd07842 STKc_CDK8_like Catalyt 99.8 6.9E-19 1.5E-23 120.3 5.1 142 1-142 139-312 (316)
301 cd05077 PTK_Jak1_rpt1 Pseudoki 99.8 1.8E-18 3.8E-23 115.6 6.9 109 9-144 151-261 (262)
302 cd07835 STKc_CDK1_like Catalyt 99.8 2.4E-18 5.1E-23 116.1 7.5 139 1-142 130-279 (283)
303 cd06606 STKc_MAPKKK Catalytic 99.8 3E-18 6.5E-23 113.8 7.8 125 1-142 132-256 (260)
304 cd06652 STKc_MEKK2 Catalytic d 99.8 2.9E-18 6.3E-23 114.7 7.8 123 1-142 137-260 (265)
305 cd06632 STKc_MEKK1_plant Catal 99.8 1.5E-18 3.2E-23 115.4 6.3 121 1-142 133-254 (258)
306 KOG0032 Ca2+/calmodulin-depend 99.8 4.1E-18 9E-23 118.4 8.6 118 6-142 175-292 (382)
307 cd07832 STKc_CCRK Catalytic do 99.8 5.2E-18 1.1E-22 114.5 8.9 139 1-142 130-281 (286)
308 cd05606 STKc_beta_ARK Catalyti 99.8 3.3E-18 7.1E-23 115.3 7.8 121 1-142 128-254 (278)
309 cd07840 STKc_CDK9_like Catalyt 99.8 1.8E-18 3.9E-23 116.7 6.5 140 1-142 131-283 (287)
310 KOG0669 Cyclin T-dependent kin 99.8 5.5E-18 1.2E-22 109.3 8.3 139 1-141 155-313 (376)
311 cd07879 STKc_p38delta_MAPK13 C 99.8 4E-18 8.6E-23 118.0 8.2 142 1-149 148-305 (342)
312 cd05046 PTK_CCK4 Pseudokinase 99.8 1.8E-18 4E-23 116.2 6.4 126 1-145 148-274 (275)
313 cd08215 STKc_Nek Catalytic dom 99.8 2E-18 4.3E-23 114.7 6.3 121 1-142 134-254 (258)
314 cd07857 STKc_MPK1 Catalytic do 99.8 4.6E-18 1E-22 117.2 8.4 139 1-141 136-290 (332)
315 cd07841 STKc_CDK7 Catalytic do 99.8 4.5E-18 9.7E-23 115.6 8.1 138 1-142 133-281 (298)
316 cd06641 STKc_MST3 Catalytic do 99.8 5.2E-18 1.1E-22 114.2 8.3 121 1-142 132-252 (277)
317 cd07864 STKc_CDK12 Catalytic d 99.8 5.3E-18 1.1E-22 115.3 8.3 139 1-142 147-298 (302)
318 cd06635 STKc_TAO1 Catalytic do 99.7 3.5E-18 7.5E-23 117.2 7.2 120 1-144 156-278 (317)
319 cd05586 STKc_Sck1_like Catalyt 99.7 3.9E-19 8.4E-24 122.5 2.5 121 1-142 127-252 (330)
320 cd06634 STKc_TAO2 Catalytic do 99.7 2.7E-18 5.9E-23 117.2 6.6 120 1-144 146-268 (308)
321 cd07844 STKc_PCTAIRE_like Cata 99.7 5.3E-18 1.2E-22 114.8 7.9 140 1-142 134-287 (291)
322 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.7 3.3E-18 7.1E-23 114.1 6.6 111 8-145 146-258 (258)
323 cd05626 STKc_LATS2 Catalytic d 99.7 1.6E-18 3.4E-23 121.6 5.4 95 32-142 208-304 (381)
324 PTZ00266 NIMA-related protein 99.7 2.5E-18 5.5E-23 130.0 6.7 116 5-142 177-294 (1021)
325 cd07843 STKc_CDC2L1 Catalytic 99.7 7E-18 1.5E-22 114.4 8.0 139 1-142 137-289 (293)
326 cd07837 STKc_CdkB_plant Cataly 99.7 6.3E-18 1.4E-22 114.6 7.7 139 1-142 141-290 (295)
327 cd05572 STKc_cGK_PKG Catalytic 99.7 6.4E-18 1.4E-22 112.8 7.5 123 1-142 124-251 (262)
328 cd05611 STKc_Rim15_like Cataly 99.7 2.2E-18 4.7E-23 114.9 5.2 119 1-141 128-246 (260)
329 cd08530 STKc_CNK2-like Catalyt 99.7 4.5E-18 9.8E-23 113.0 6.6 119 1-142 134-252 (256)
330 KOG0666 Cyclin C-dependent kin 99.7 2.2E-18 4.7E-23 113.9 4.9 74 1-74 163-242 (438)
331 cd07866 STKc_BUR1 Catalytic do 99.7 8.7E-18 1.9E-22 114.6 8.1 141 1-142 146-307 (311)
332 cd07851 STKc_p38 Catalytic dom 99.7 5.7E-18 1.2E-22 117.3 7.1 135 1-142 149-297 (343)
333 cd05622 STKc_ROCK1 Catalytic d 99.7 2.2E-18 4.7E-23 120.5 4.8 126 1-143 173-304 (371)
334 KOG0604 MAP kinase-activated p 99.7 9.6E-18 2.1E-22 110.3 7.5 123 5-142 199-321 (400)
335 cd05599 STKc_NDR_like Catalyti 99.7 1.6E-18 3.5E-23 120.8 4.1 125 1-142 132-295 (364)
336 cd05574 STKc_phototropin_like 99.7 5E-18 1.1E-22 116.2 6.4 124 1-142 134-288 (316)
337 cd07830 STKc_MAK_like Catalyti 99.7 1.8E-17 4E-22 111.7 8.9 139 1-142 130-279 (283)
338 cd05625 STKc_LATS1 Catalytic d 99.7 1.9E-18 4.1E-23 121.2 4.1 44 32-75 208-251 (382)
339 cd05580 STKc_PKA Catalytic dom 99.7 5.1E-18 1.1E-22 114.9 5.9 116 1-141 132-252 (290)
340 cd05628 STKc_NDR1 Catalytic do 99.7 3.9E-18 8.4E-23 119.0 5.4 75 1-75 132-239 (363)
341 cd08225 STKc_Nek5 Catalytic do 99.7 1.3E-17 2.8E-22 110.9 7.7 122 1-143 132-254 (257)
342 cd05610 STKc_MASTL Catalytic d 99.7 3.9E-18 8.5E-23 126.8 5.7 123 4-143 512-634 (669)
343 cd05577 STKc_GRK Catalytic dom 99.7 1E-17 2.2E-22 112.7 6.9 123 1-142 126-253 (277)
344 cd06630 STKc_MEKK1 Catalytic d 99.7 1.4E-17 3E-22 111.4 7.5 127 1-142 134-263 (268)
345 cd07856 STKc_Sty1_Hog1 Catalyt 99.7 1.8E-17 3.8E-22 114.2 8.0 138 1-143 139-288 (328)
346 cd05621 STKc_ROCK2 Catalytic d 99.7 3.4E-18 7.3E-23 119.5 4.4 126 1-143 173-304 (370)
347 cd05579 STKc_MAST_like Catalyt 99.7 6.7E-18 1.4E-22 112.6 5.6 124 1-142 124-253 (265)
348 PTZ00024 cyclin-dependent prot 99.7 3.5E-17 7.6E-22 113.0 9.2 140 1-142 150-312 (335)
349 cd06633 STKc_TAO3 Catalytic do 99.7 1.1E-17 2.5E-22 114.4 6.7 118 1-142 152-272 (313)
350 KOG0614 cGMP-dependent protein 99.7 5.4E-18 1.2E-22 118.4 5.1 115 1-136 551-665 (732)
351 cd07829 STKc_CDK_like Catalyti 99.7 3.3E-17 7.3E-22 110.3 8.5 137 1-142 129-278 (282)
352 cd05578 STKc_Yank1 Catalytic d 99.7 1.3E-17 2.8E-22 111.1 6.2 121 1-141 131-253 (258)
353 cd05598 STKc_LATS Catalytic do 99.7 1.6E-18 3.4E-23 121.4 1.9 125 1-142 132-300 (376)
354 cd08227 PK_STRAD_alpha Pseudok 99.7 1.5E-17 3.3E-22 114.4 6.7 147 1-148 132-314 (327)
355 cd07854 STKc_MAPK4_6 Catalytic 99.7 1.7E-17 3.6E-22 114.9 6.9 140 1-141 145-298 (342)
356 PLN00181 protein SPA1-RELATED; 99.7 7.1E-18 1.5E-22 127.8 5.4 117 5-142 134-264 (793)
357 cd08226 PK_STRAD_beta Pseudoki 99.7 4.7E-17 1E-21 112.1 9.0 153 1-154 132-321 (328)
358 PLN03225 Serine/threonine-prot 99.7 5.5E-18 1.2E-22 123.7 4.6 138 1-142 286-449 (566)
359 cd06627 STKc_Cdc7_like Catalyt 99.7 2.7E-17 6E-22 109.1 7.6 121 1-142 130-250 (254)
360 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.7 4.2E-17 9.1E-22 109.7 8.2 110 8-144 162-273 (274)
361 PLN00009 cyclin-dependent kina 99.7 2.7E-17 5.9E-22 111.6 7.3 139 1-142 133-283 (294)
362 KOG0580 Serine/threonine prote 99.7 4.4E-17 9.5E-22 103.9 7.5 119 1-143 155-273 (281)
363 cd05581 STKc_PDK1 Catalytic do 99.7 1.5E-17 3.3E-22 111.8 5.8 122 1-142 133-276 (280)
364 cd07877 STKc_p38alpha_MAPK14 C 99.7 3.7E-17 8E-22 113.3 7.7 135 1-142 151-299 (345)
365 cd05583 STKc_MSK_N N-terminal 99.7 2.6E-17 5.6E-22 111.4 6.8 128 1-145 136-265 (288)
366 cd05629 STKc_NDR_like_fungal C 99.7 4.5E-18 9.7E-23 119.2 3.1 94 32-142 208-304 (377)
367 cd07836 STKc_Pho85 Catalytic d 99.7 4.6E-17 9.9E-22 109.8 7.9 139 1-142 131-280 (284)
368 smart00220 S_TKc Serine/Threon 99.7 2.9E-17 6.3E-22 108.0 6.8 123 1-142 118-240 (244)
369 KOG0696 Serine/threonine prote 99.7 2.3E-17 5E-22 113.1 6.3 73 1-75 481-553 (683)
370 KOG1035 eIF-2alpha kinase GCN2 99.7 1.9E-17 4.2E-22 124.9 6.4 124 1-142 728-870 (1351)
371 cd05627 STKc_NDR2 Catalytic do 99.7 4.6E-18 9.9E-23 118.5 2.0 75 1-75 132-239 (360)
372 cd06653 STKc_MEKK3_like_1 Cata 99.7 5.5E-17 1.2E-21 108.5 7.1 123 1-142 137-260 (264)
373 cd05623 STKc_MRCK_alpha Cataly 99.7 2.1E-17 4.6E-22 114.0 4.8 127 1-143 133-266 (332)
374 cd08222 STKc_Nek11 Catalytic d 99.7 1.4E-16 3E-21 106.2 8.6 119 2-142 138-256 (260)
375 cd05123 STKc_AGC Catalytic dom 99.7 4.4E-17 9.5E-22 107.9 6.0 117 1-139 124-240 (250)
376 cd07880 STKc_p38gamma_MAPK12 C 99.7 7.9E-17 1.7E-21 111.6 6.8 141 1-147 149-304 (343)
377 cd05597 STKc_DMPK_like Catalyt 99.7 4.6E-17 9.9E-22 112.3 5.2 127 1-143 133-266 (331)
378 cd05624 STKc_MRCK_beta Catalyt 99.7 3.7E-17 8E-22 112.8 4.0 126 1-142 133-265 (331)
379 cd05613 STKc_MSK1_N N-terminal 99.7 1.5E-16 3.3E-21 107.7 6.6 125 1-142 136-267 (290)
380 cd05576 STKc_RPK118_like Catal 99.7 1E-16 2.2E-21 105.7 5.5 109 1-138 116-224 (237)
381 KOG0670 U4/U6-associated splic 99.7 7.7E-18 1.7E-22 117.9 -0.2 74 1-78 567-641 (752)
382 KOG0610 Putative serine/threon 99.7 3.6E-16 7.9E-21 106.6 7.2 92 32-141 295-390 (459)
383 KOG0695 Serine/threonine prote 99.6 2.8E-16 6.2E-21 105.4 5.8 120 1-136 382-503 (593)
384 KOG1290 Serine/threonine prote 99.6 3.5E-16 7.6E-21 108.7 5.7 132 6-142 390-549 (590)
385 KOG0586 Serine/threonine prote 99.6 1.6E-16 3.5E-21 112.6 3.7 119 1-142 186-305 (596)
386 KOG1027 Serine/threonine prote 99.6 6E-17 1.3E-21 118.3 0.9 117 6-141 647-765 (903)
387 KOG0664 Nemo-like MAPK-related 99.6 3.1E-16 6.8E-21 102.5 3.3 140 1-143 187-343 (449)
388 KOG0662 Cyclin-dependent kinas 99.6 3.3E-15 7.2E-20 92.2 7.2 139 1-142 132-282 (292)
389 KOG0665 Jun-N-terminal kinase 99.6 2.1E-15 4.5E-20 100.0 6.4 135 1-142 149-309 (369)
390 KOG0587 Traf2- and Nck-interac 99.6 7.5E-16 1.6E-20 113.2 4.4 122 1-142 154-281 (953)
391 KOG0984 Mitogen-activated prot 99.6 7.4E-16 1.6E-20 96.8 3.6 73 1-76 180-256 (282)
392 KOG0590 Checkpoint kinase and 99.6 7.5E-16 1.6E-20 112.7 3.5 131 1-142 451-584 (601)
393 KOG4236 Serine/threonine prote 99.6 6.3E-17 1.4E-21 113.9 -3.2 113 8-141 705-817 (888)
394 KOG0612 Rho-associated, coiled 99.5 6.3E-15 1.4E-19 111.1 2.8 73 1-74 206-283 (1317)
395 KOG1151 Tousled-like protein k 99.5 8.4E-15 1.8E-19 101.6 2.7 122 6-141 609-739 (775)
396 KOG0608 Warts/lats-like serine 99.5 4E-14 8.6E-19 101.9 5.3 80 1-80 760-879 (1034)
397 PLN03224 probable serine/threo 99.5 1.6E-13 3.4E-18 98.9 6.4 134 1-142 340-499 (507)
398 KOG1023 Natriuretic peptide re 99.4 2.1E-13 4.5E-18 96.7 6.0 138 2-150 81-227 (484)
399 KOG0195 Integrin-linked kinase 99.4 4.1E-13 8.8E-18 88.1 4.4 97 34-148 348-447 (448)
400 KOG0576 Mitogen-activated prot 99.4 2E-13 4.2E-18 98.5 2.9 124 1-142 143-270 (829)
401 cd00180 PKc Catalytic domain o 99.4 1.1E-12 2.3E-17 84.3 6.1 90 1-143 123-214 (215)
402 KOG1033 eIF-2alpha kinase PEK/ 99.4 3.3E-13 7.2E-18 94.8 2.6 111 4-136 390-505 (516)
403 KOG4250 TANK binding protein k 99.4 1.7E-12 3.6E-17 94.1 5.9 138 9-149 163-312 (732)
404 KOG0668 Casein kinase II, alph 99.3 4.8E-12 1E-16 81.1 5.6 137 2-141 164-320 (338)
405 KOG0607 MAP kinase-interacting 99.3 2.5E-12 5.5E-17 86.0 4.4 132 8-142 217-360 (463)
406 KOG1152 Signal transduction se 99.2 6.9E-12 1.5E-16 89.6 0.7 69 1-73 701-770 (772)
407 KOG0606 Microtubule-associated 99.1 1.2E-11 2.6E-16 93.5 1.6 117 2-135 175-304 (1205)
408 smart00221 STYKc Protein kinas 99.1 2.2E-10 4.7E-15 74.6 5.8 73 1-74 129-202 (225)
409 PF14531 Kinase-like: Kinase-l 99.1 2.2E-10 4.7E-15 76.9 4.4 105 1-134 176-288 (288)
410 KOG1345 Serine/threonine kinas 99.0 2E-10 4.3E-15 75.5 3.6 118 7-141 160-282 (378)
411 KOG1167 Serine/threonine prote 99.0 2E-10 4.3E-15 79.0 1.6 110 33-142 238-380 (418)
412 KOG0603 Ribosomal protein S6 k 99.0 5E-10 1.1E-14 80.7 3.1 66 1-74 128-193 (612)
413 COG0515 SPS1 Serine/threonine 98.8 3.6E-08 7.9E-13 67.3 9.1 134 1-143 132-275 (384)
414 KOG1240 Protein kinase contain 98.7 2.4E-08 5.1E-13 76.8 5.5 126 1-145 151-293 (1431)
415 KOG0590 Checkpoint kinase and 98.7 2.6E-09 5.5E-14 79.0 0.1 125 2-141 156-284 (601)
416 KOG4158 BRPK/PTEN-induced prot 98.5 4.5E-07 9.6E-12 63.2 6.1 113 8-138 383-505 (598)
417 COG4248 Uncharacterized protei 98.4 2.8E-06 6E-11 60.0 8.0 148 1-153 148-306 (637)
418 KOG1164 Casein kinase (serine/ 98.0 0.00011 2.3E-09 51.0 9.3 127 7-150 164-300 (322)
419 KOG0606 Microtubule-associated 98.0 7.5E-06 1.6E-10 63.3 3.4 90 32-138 995-1084(1205)
420 KOG1165 Casein kinase (serine/ 97.8 0.00018 3.9E-09 49.5 7.5 71 7-77 166-241 (449)
421 KOG2137 Protein kinase [Signal 97.7 1.2E-05 2.6E-10 59.6 1.0 126 1-141 131-263 (700)
422 KOG1166 Mitotic checkpoint ser 97.4 0.00084 1.8E-08 52.6 6.8 66 6-71 837-902 (974)
423 KOG0601 Cyclin-dependent kinas 97.2 0.0009 2E-08 48.9 4.8 125 3-148 255-383 (524)
424 PRK09188 serine/threonine prot 97.1 0.00027 5.9E-09 49.8 1.8 46 1-46 143-194 (365)
425 KOG1266 Protein kinase [Signal 97.0 0.0015 3.3E-08 45.2 4.5 38 32-69 242-279 (458)
426 cd05610 STKc_MASTL Catalytic d 96.9 0.00048 1E-08 52.5 1.5 58 1-60 135-193 (669)
427 KOG1163 Casein kinase (serine/ 96.8 0.0031 6.7E-08 41.8 4.8 72 7-78 151-227 (341)
428 PRK12274 serine/threonine prot 96.2 0.0031 6.7E-08 41.1 1.9 72 1-72 123-207 (218)
429 PRK10359 lipopolysaccharide co 95.8 0.001 2.2E-08 43.9 -1.7 49 1-64 166-214 (232)
430 KOG1093 Predicted protein kina 93.4 0.088 1.9E-06 39.2 2.9 83 51-141 110-192 (725)
431 KOG1243 Protein kinase [Genera 88.5 0.8 1.7E-05 35.1 3.9 65 1-69 136-200 (690)
432 KOG0576 Mitogen-activated prot 84.9 0.52 1.1E-05 36.2 1.4 65 4-71 365-429 (829)
433 PF04301 DUF452: Protein of un 83.8 2.3 5E-05 28.0 3.8 22 132-153 137-158 (213)
434 KOG1035 eIF-2alpha kinase GCN2 83.2 3.3 7.2E-05 34.4 5.0 108 4-143 323-434 (1351)
435 KOG0601 Cyclin-dependent kinas 79.8 1.4 3.1E-05 33.0 2.0 114 2-143 398-514 (524)
436 PRK01723 3-deoxy-D-manno-octul 78.2 1.2 2.6E-05 29.8 1.1 20 1-20 173-192 (239)
437 smart00090 RIO RIO-like kinase 70.8 2 4.4E-05 28.7 0.8 19 1-20 180-198 (237)
438 TIGR01982 UbiB 2-polyprenylphe 69.3 3.2 7E-05 30.5 1.6 21 1-21 288-308 (437)
439 KOG1684 Enoyl-CoA hydratase [L 69.3 11 0.00024 27.0 4.1 29 115-148 261-289 (401)
440 KOG1266 Protein kinase [Signal 65.8 26 0.00055 25.3 5.2 90 33-141 28-117 (458)
441 PF15027 DUF4525: Domain of un 64.9 20 0.00044 21.4 4.0 41 118-158 21-61 (138)
442 KOG1826 Ras GTPase activating 63.3 1.5 3.3E-05 37.8 -1.0 68 2-71 1372-1439(2724)
443 cd00059 FH Forkhead (FH), also 61.8 14 0.00031 20.0 2.8 29 119-147 6-34 (78)
444 smart00707 RPEL Repeat in Dros 61.5 5.7 0.00012 16.6 1.0 11 132-142 8-18 (26)
445 PF02755 RPEL: RPEL repeat; I 60.9 5.1 0.00011 16.7 0.8 11 132-142 8-18 (26)
446 PRK14879 serine/threonine prot 60.5 4.3 9.4E-05 26.1 0.9 18 1-19 126-143 (211)
447 PF13220 DUF4028: Protein of u 60.1 14 0.0003 18.3 2.3 24 132-155 39-62 (65)
448 PF14707 Sulfatase_C: C-termin 57.2 16 0.00034 22.0 2.8 22 135-156 79-100 (131)
449 TIGR03724 arch_bud32 Kae1-asso 56.9 5.1 0.00011 25.5 0.7 17 2-19 122-138 (199)
450 KOG3960 Myogenic helix-loop-he 56.1 46 0.001 22.7 4.9 29 114-142 131-159 (284)
451 PRK14064 exodeoxyribonuclease 55.7 25 0.00055 18.9 3.1 23 133-155 4-26 (75)
452 PRK00977 exodeoxyribonuclease 52.9 27 0.00059 19.1 3.0 25 131-155 6-30 (80)
453 PRK09605 bifunctional UGMP fam 50.2 7.3 0.00016 29.5 0.7 19 1-20 459-477 (535)
454 PF02671 PAH: Paired amphipath 49.2 30 0.00065 16.4 4.1 34 116-153 4-37 (47)
455 smart00339 FH FORKHEAD. FORKHE 48.5 30 0.00065 19.3 2.8 29 120-148 7-35 (89)
456 TIGR01280 xseB exodeoxyribonuc 48.4 30 0.00064 18.2 2.6 19 136-154 2-20 (67)
457 PF06288 DUF1040: Protein of u 48.2 47 0.001 18.3 3.8 30 115-149 5-34 (86)
458 PF00250 Fork_head: Fork head 45.5 34 0.00073 19.4 2.8 31 119-149 6-36 (96)
459 PRK14067 exodeoxyribonuclease 45.4 42 0.0009 18.4 3.0 23 132-154 4-26 (80)
460 PF13314 DUF4083: Domain of un 45.0 43 0.00094 17.0 3.0 31 122-152 26-56 (58)
461 PRK14068 exodeoxyribonuclease 44.6 35 0.00077 18.5 2.6 22 134-155 5-26 (76)
462 PF01436 NHL: NHL repeat; Int 44.5 14 0.00031 15.3 0.9 16 3-18 9-24 (28)
463 COG4663 FcbT1 TRAP-type mannit 43.4 32 0.0007 24.3 2.8 37 123-159 293-329 (363)
464 PF02912 Phe_tRNA-synt_N: Amin 43.1 4.2 9.1E-05 21.7 -1.1 32 122-153 26-57 (73)
465 COG5072 ALK1 Serine/threonine 43.1 14 0.00031 27.0 1.2 19 1-20 353-371 (488)
466 PRK14063 exodeoxyribonuclease 42.4 47 0.001 18.0 2.9 22 133-154 3-24 (76)
467 PF12263 DUF3611: Protein of u 42.4 43 0.00093 21.6 3.2 26 121-146 81-106 (183)
468 PRK04750 ubiB putative ubiquin 40.0 18 0.00038 27.7 1.4 21 1-21 291-315 (537)
469 KOG0624 dsRNA-activated protei 40.0 68 0.0015 23.4 4.0 38 116-154 239-276 (504)
470 smart00580 PUG domain in prote 39.3 36 0.00078 17.2 2.0 19 136-154 2-20 (58)
471 PF02173 pKID: pKID domain; I 38.0 44 0.00095 15.6 2.0 13 133-145 18-30 (41)
472 smart00054 EFh EF-hand, calciu 37.3 30 0.00066 13.0 2.7 23 124-146 6-28 (29)
473 PRK14069 exodeoxyribonuclease 37.2 53 0.0011 18.7 2.6 22 133-154 6-27 (95)
474 cd07981 TAF12 TATA Binding Pro 35.8 72 0.0016 16.9 3.5 28 128-156 13-40 (72)
475 PF11852 DUF3372: Domain of un 34.7 1E+02 0.0022 19.7 3.9 30 120-150 21-50 (168)
476 COG3084 Uncharacterized protei 34.4 79 0.0017 17.0 4.0 29 116-149 6-34 (88)
477 PRK14066 exodeoxyribonuclease 33.5 63 0.0014 17.4 2.5 19 136-154 5-23 (75)
478 PF04433 SWIRM: SWIRM domain; 32.9 37 0.00079 18.6 1.6 32 114-145 33-64 (86)
479 PF02609 Exonuc_VII_S: Exonucl 31.2 74 0.0016 15.6 2.6 16 138-153 2-17 (53)
480 PF11695 DUF3291: Domain of un 30.5 74 0.0016 19.6 2.7 28 123-150 100-127 (140)
481 PHA01632 hypothetical protein 30.5 81 0.0018 15.9 2.8 20 133-152 26-45 (64)
482 PF08403 AA_permease_N: Amino 29.6 43 0.00092 18.1 1.4 15 133-147 39-53 (74)
483 COG3382 Solo B3/4 domain (OB-f 28.8 1.1E+02 0.0024 20.7 3.5 28 118-145 64-92 (229)
484 PF08972 DUF1902: Domain of un 28.8 88 0.0019 15.7 2.8 24 133-156 27-50 (54)
485 PF14954 LIX1: Limb expression 28.3 1.3E+02 0.0028 20.1 3.7 34 119-152 89-122 (252)
486 PF03681 UPF0150: Uncharacteri 27.9 79 0.0017 14.9 2.5 18 135-152 29-46 (48)
487 PF01633 Choline_kinase: Choli 27.5 38 0.00081 22.0 1.2 19 1-19 155-174 (211)
488 PF00036 EF-hand_1: EF hand; 26.7 64 0.0014 13.5 2.6 24 123-146 5-28 (29)
489 COG3642 Mn2+-dependent serine/ 26.6 36 0.00078 22.3 1.0 13 7-19 128-140 (204)
490 PHA02602 56 dCTP pyrophosphata 26.0 83 0.0018 19.9 2.4 27 127-153 53-79 (172)
491 PF07010 Endomucin: Endomucin; 25.8 57 0.0012 21.9 1.8 17 117-133 205-221 (259)
492 smart00544 MA3 Domain in DAP-5 25.6 89 0.0019 17.9 2.5 30 116-145 35-64 (113)
493 PF15361 RIC3: Resistance to i 24.5 67 0.0015 20.1 1.9 15 53-67 86-100 (152)
494 PF13713 BRX_N: Transcription 24.3 92 0.002 14.4 2.5 26 130-155 3-28 (39)
495 KOG3542 cAMP-regulated guanine 24.0 87 0.0019 25.0 2.7 17 120-136 257-273 (1283)
496 COG1598 Predicted nuclease of 23.5 1.3E+02 0.0028 15.9 3.1 24 133-156 29-52 (73)
497 PF08696 Dna2: DNA replication 23.4 2E+02 0.0044 19.0 4.0 22 134-155 109-130 (209)
498 PF11108 Phage_glycop_gL: Vira 23.3 1.7E+02 0.0037 17.3 3.3 26 133-158 74-99 (111)
499 PF10790 DUF2604: Protein of U 22.9 41 0.0009 17.5 0.6 9 10-18 54-62 (76)
500 PRK04156 gltX glutamyl-tRNA sy 22.7 89 0.0019 24.3 2.5 30 122-151 29-58 (567)
No 1
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-28 Score=169.78 Aligned_cols=130 Identities=32% Similarity=0.490 Sum_probs=99.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++++..+||+|||+++...+ +.+.......-...|.|||.+....++.++||||||++++|+++ |+.||..+..
T Consensus 334 iLV~~~~~vKIsDFGLAr~~~d-~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-- 410 (468)
T KOG0197|consen 334 ILVDEDLVVKISDFGLARLIGD-DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-- 410 (468)
T ss_pred eeeccCceEEEcccccccccCC-CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--
Confidence 7899999999999999995543 33333333334567999999999999999999999999999997 7777655321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
.+++.. -....+.+.|..|+..+.++|..||+.+|.+|||++.+...|+.+...
T Consensus 411 ---------------~ev~~~--le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 411 ---------------EEVLEL--LERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ---------------HHHHHH--HhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 111111 112233445668999999999999999999999999888888877654
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.95 E-value=2.1e-27 Score=163.17 Aligned_cols=135 Identities=24% Similarity=0.352 Sum_probs=101.7
Q ss_pred CccCCCC-ceEEcccccceecCCCCCcccccccccccccccccccC--CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS--EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~--~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
||++.++ ++||+|||+++...... ...+...||+.|||||++. ...|+.++||||||+++||+++|..||.....
T Consensus 174 iLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~ 251 (362)
T KOG0192|consen 174 ILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP 251 (362)
T ss_pred EEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH
Confidence 5788887 99999999998864322 2233367999999999999 55899999999999999999999999976533
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhh
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDV 155 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~ 155 (159)
. ...... .... .+...+..++..+..++.+||+.||.+||++.+++..|+.+...+..+.
T Consensus 252 ~--~~~~~v---~~~~-------------~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~ 311 (362)
T KOG0192|consen 252 V--QVASAV---VVGG-------------LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAG 311 (362)
T ss_pred H--HHHHHH---HhcC-------------CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccC
Confidence 1 110000 0000 0011122477789999999999999999999999999999998877543
No 3
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=5.8e-27 Score=169.70 Aligned_cols=130 Identities=28% Similarity=0.460 Sum_probs=103.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
.|+.++..|||+|||+++..-..+.+...+.-.-..+||+||.+...+|+.++||||||+++||+++ |..||.+...++
T Consensus 634 CLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E 713 (774)
T KOG1026|consen 634 CLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE 713 (774)
T ss_pred ceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH
Confidence 4788999999999999998766666665544455678999999999999999999999999999997 888987643321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
..+.+. .+. ..+.|.+||..+..||..||+.+|++||+++||-..|++..+
T Consensus 714 --VIe~i~---------------~g~--lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 714 --VIECIR---------------AGQ--LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred --HHHHHH---------------cCC--cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 111111 111 133456899999999999999999999999999999998754
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-26 Score=154.02 Aligned_cols=125 Identities=19% Similarity=0.248 Sum_probs=94.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.+|.|||||||++....+. ...+.+||..||+||.+.+..|+.++||||||+.++|++.|+.||........
T Consensus 210 lLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~ 285 (364)
T KOG0581|consen 210 LLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYL 285 (364)
T ss_pred eeeccCCCEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCC
Confidence 68999999999999999887533 34557899999999999999999999999999999999999999865411111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
... ++++..+...++..+.. ...+++..++..||+.||.+|||+.|+++
T Consensus 286 ~~~------------~Ll~~Iv~~ppP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 286 DIF------------ELLCAIVDEPPPRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CHH------------HHHHHHhcCCCCCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 22222222111111111 36678999999999999999999999984
No 5
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=1.5e-25 Score=145.39 Aligned_cols=124 Identities=23% Similarity=0.300 Sum_probs=92.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|.++.+|.|||+|||+++.+.+... ..+..+|||.||+||.++..+|+.++||||+||++|||..-++||.+. +-.
T Consensus 159 IFl~~~gvvKLGDfGL~r~l~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~ 234 (375)
T KOG0591|consen 159 IFLTANGVVKLGDFGLGRFLSSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLL 234 (375)
T ss_pred eEEcCCCceeeccchhHhHhcchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHH
Confidence 5789999999999999999864322 234567999999999999999999999999999999999999999763 112
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhc-hHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVK-MDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
++..-+.+. +.. +.| ......+..++..|+..||..||+...++..+.
T Consensus 235 ~L~~KI~qg---d~~--------------~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 235 SLCKKIEQG---DYP--------------PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred HHHHHHHcC---CCC--------------CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 222222211 110 112 356677999999999999999999654544433
No 6
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.92 E-value=1.5e-25 Score=146.60 Aligned_cols=137 Identities=20% Similarity=0.185 Sum_probs=95.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||+..+|.+||||||+|+.....+. ..+..+.|.||+|||.+.+ .+|+.++|||+.||++.||++|.+.|.+...-+
T Consensus 132 ILit~~gvvKLCDFGFAR~L~~pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD 209 (396)
T KOG0593|consen 132 ILITQNGVVKLCDFGFARTLSAPGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID 209 (396)
T ss_pred eEEecCCcEEeccchhhHhhcCCcc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH
Confidence 7899999999999999998763222 3455678999999998887 589999999999999999999999987643222
Q ss_pred ccHHHHHHhhcC-------------CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 80 MSLRDWVNKSLS-------------GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 80 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
..-.+..... +.+..+.-|....-.+...........+++++..|++.||++|+++++++
T Consensus 210 --QLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 210 --QLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred --HHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence 1111111111 11111111212211122222345566899999999999999999999998
No 7
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-25 Score=168.05 Aligned_cols=135 Identities=27% Similarity=0.407 Sum_probs=101.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
+|++....|||+|||+|+-+...+.+.......-...|||||.+....|+.++||||||+++||+++ |..||.....
T Consensus 833 CLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-- 910 (1025)
T KOG1095|consen 833 CLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-- 910 (1025)
T ss_pred eeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch--
Confidence 4788889999999999995444443333332234568999999999999999999999999999998 7788765322
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD 154 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~ 154 (159)
.+++...+... +.+.|..|+..+.++|..||+.+|++||++..|++++..+.+.....
T Consensus 911 ---------------~~v~~~~~~gg--RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 911 ---------------FEVLLDVLEGG--RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred ---------------HHHHHHHHhCC--ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 11111111111 33456689999999999999999999999999999999998876543
No 8
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=7.8e-26 Score=153.72 Aligned_cols=121 Identities=20% Similarity=0.276 Sum_probs=91.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||+..+|.+|++|||++..+.+ ......+++|||.|||||+++...|+.++|+||+|++.+||+.|.+|+....+..
T Consensus 142 il~s~~g~vkl~DfgVa~ql~~--~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr- 218 (467)
T KOG0201|consen 142 ILLSESGDVKLADFGVAGQLTN--TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR- 218 (467)
T ss_pred eeEeccCcEEEEecceeeeeec--hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce-
Confidence 5677789999999999988743 2333466889999999999998899999999999999999999999987654311
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+ --+ +.+..++.... +....+.+++..|++.||..||++.++++
T Consensus 219 -v------------lfl----Ipk~~PP~L~~-~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 219 -V------------LFL----IPKSAPPRLDG-DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred -E------------EEe----ccCCCCCcccc-ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 0 001 11111111111 45567899999999999999999999985
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=2.9e-25 Score=156.06 Aligned_cols=120 Identities=19% Similarity=0.302 Sum_probs=91.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
++++++..|||+|||+|......++ ...+.||||-|+|||++...+++..+||||+||++|.++.|++||+....
T Consensus 149 lfL~~~~~VKIgDFGLAt~le~~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v--- 223 (592)
T KOG0575|consen 149 LFLNENMNVKIGDFGLATQLEYDGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV--- 223 (592)
T ss_pred eeecCcCcEEecccceeeeecCccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH---
Confidence 5788999999999999988754322 23447899999999999988999999999999999999999999975321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.+.+... ....+ ..|........+|+..+|+.||++|||+++|+.
T Consensus 224 --kety~~I-------------k~~~Y--~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 224 --KETYNKI-------------KLNEY--SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred --HHHHHHH-------------HhcCc--ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111111 01111 112244556788999999999999999999984
No 10
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3e-25 Score=154.79 Aligned_cols=123 Identities=20% Similarity=0.290 Sum_probs=93.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.+|.+||+|||+|..+.. ....+...+|||.|||||++....|+.+.||||+|++..||+.|++||-. +.
T Consensus 400 ILL~~~g~vKltDFGFcaqi~~--~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~ 473 (550)
T KOG0578|consen 400 ILLTMDGSVKLTDFGFCAQISE--EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----EN 473 (550)
T ss_pred eEeccCCcEEEeeeeeeecccc--ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CC
Confidence 6889999999999999988753 23356668899999999999999999999999999999999999999743 22
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.++..+.....+. .....+......+.+++.+||+.|+.+|+++.|||+
T Consensus 474 PlrAlyLIa~ng~-------------P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 474 PLRALYLIATNGT-------------PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred hHHHHHHHhhcCC-------------CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 2222211111100 001112345678999999999999999999999984
No 11
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.91 E-value=6.3e-25 Score=155.67 Aligned_cols=129 Identities=22% Similarity=0.345 Sum_probs=103.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||+...-+|||+|||+++.+.+...+. .+...-...|++||.+....++.++|||-||+++||+++ |..||++..+.+
T Consensus 522 iLVsSp~CVKLaDFGLSR~~ed~~yYk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD 600 (974)
T KOG4257|consen 522 ILVSSPQCVKLADFGLSRYLEDDAYYK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD 600 (974)
T ss_pred eeecCcceeeecccchhhhccccchhh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc
Confidence 678888999999999999986554443 233334567999999999999999999999999999986 889998865533
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
.. -. -....+.+.|+.|++.+..+|.+||.+||++||.+.++...|..+.+
T Consensus 601 VI-----------------~~--iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 601 VI-----------------GH--IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred eE-----------------EE--ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 21 10 11123445677999999999999999999999999999999999887
No 12
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.3e-24 Score=148.86 Aligned_cols=146 Identities=40% Similarity=0.668 Sum_probs=110.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc-ccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF-IGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~-~~~ 79 (159)
||+|+++.+||+|||+|+..... .....+...||.+|++||+......+.++||||||+++.|+++|+.+..... .+.
T Consensus 208 ILLD~~~~aKlsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~ 286 (361)
T KOG1187|consen 208 ILLDEDFNAKLSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGE 286 (361)
T ss_pred eeECCCCCEEccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCccc
Confidence 79999999999999999665321 2211111168999999999998889999999999999999999998776543 234
Q ss_pred ccHHHHHHhhcC-CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLS-GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
..+..|...... ..+.+++|+.+...... ...+...+..++.+|++.+|..||++.+|++.|+.+...
T Consensus 287 ~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~---~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 287 LSLVEWAKPLLEEGKLREIVDPRLKEGEYP---DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred ccHHHHHHHHHHCcchhheeCCCccCCCCC---hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 457777654443 36777888877632221 015677799999999999999999999999998665543
No 13
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=8.9e-25 Score=149.10 Aligned_cols=132 Identities=23% Similarity=0.253 Sum_probs=91.9
Q ss_pred CccCCCCceEEcccccceecCCCC-Ccccc-cccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGD-DSVTQ-TMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~-~~~~~-~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
|||+.+|.|||+|||++..+.+++ ..... ....|++.|+|||++.. .+|+.++||||||++..|+..|..||....
T Consensus 157 ILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p 236 (516)
T KOG0582|consen 157 ILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP 236 (516)
T ss_pred EEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC
Confidence 799999999999999987654433 23333 56789999999999443 379999999999999999999999997643
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+...-+ ..++...+...... +.. .........+.+++..|++.||.+|||++++++
T Consensus 237 PmkvLl-~tLqn~pp~~~t~~----~~~-----d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 237 PMKVLL-LTLQNDPPTLLTSG----LDK-----DEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hHHHHH-HHhcCCCCCccccc----CCh-----HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 322111 11111111111001 111 111233458999999999999999999999984
No 14
>PHA02988 hypothetical protein; Provisional
Probab=99.91 E-value=1.3e-24 Score=146.62 Aligned_cols=126 Identities=20% Similarity=0.286 Sum_probs=92.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
||++.++.+||+|||+++...... ....|+..|+|||++.+ ..++.++|+||||+++|++++|..||......
T Consensus 154 ill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~ 228 (283)
T PHA02988 154 FLVTENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK 228 (283)
T ss_pred EEECCCCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH
Confidence 578899999999999987653221 12457889999999865 57889999999999999999999999753211
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
...........+ ...+..++..+.+++.+||+.||.+|||+.++++.|+.++.
T Consensus 229 -----~~~~~i~~~~~~-------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 229 -----EIYDLIINKNNS-------------LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred -----HHHHHHHhcCCC-------------CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 111111000000 00112456678999999999999999999999999998764
No 15
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.91 E-value=2.6e-24 Score=148.43 Aligned_cols=132 Identities=26% Similarity=0.417 Sum_probs=94.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++...............+++.|+|||++.+..++.++|+||||++++++++ |..||.......
T Consensus 205 il~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~ 284 (338)
T cd05102 205 ILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE 284 (338)
T ss_pred EEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH
Confidence 5788899999999999986543322222233445678999999988888999999999999999997 899986533211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
........ .. . . ..+..++..+.+++.+||+.||++|||+.++++.|+++..+
T Consensus 285 -~~~~~~~~---~~--------~-~-----~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 285 -EFCQRLKD---GT--------R-M-----RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred -HHHHHHhc---CC--------C-C-----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11111100 00 0 0 00123456789999999999999999999999999988764
No 16
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-24 Score=153.18 Aligned_cols=132 Identities=27% Similarity=0.389 Sum_probs=102.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|||..+..|||+|||-++..... .....+.||..|||||++.+.+.+.++||||||+++|||++|..||.......+
T Consensus 243 iLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI 319 (904)
T KOG4721|consen 243 ILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI 319 (904)
T ss_pred eEeeccceEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee
Confidence 68888899999999999876432 334557899999999999999999999999999999999999999865432111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD 153 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~ 153 (159)
.+ .+....-.++.|..|+..+.-|++.||+..|-.||++.+++..|+-...+++.
T Consensus 320 Iw------------------GVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~ 374 (904)
T KOG4721|consen 320 IW------------------GVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLS 374 (904)
T ss_pred EE------------------eccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhc
Confidence 10 01111222345567888999999999999999999999999888766555543
No 17
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=1.6e-23 Score=132.17 Aligned_cols=130 Identities=21% Similarity=0.160 Sum_probs=91.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+|+ ||+++...... ..|++.|+|||++.+..++.++||||+|+++|++++|..||........
T Consensus 42 il~~~~~~~~~--fG~~~~~~~~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~ 112 (176)
T smart00750 42 ILLTWDGLLKL--DGSVAFKTPEQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA 112 (176)
T ss_pred EeEcCccceee--ccceEeecccc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH
Confidence 57888999999 99998764221 2578999999999988899999999999999999999999864321111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHH--HHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCL--SSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
........ .....+.....+.... ..+.+++.+||..+|.+||++.++++.+..+..+.
T Consensus 113 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~ 173 (176)
T smart00750 113 ILEILLNG------------MPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET 173 (176)
T ss_pred HHHHHHHH------------hccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence 11111111 0101011001111222 26899999999999999999999999988876543
No 18
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=3.6e-24 Score=152.22 Aligned_cols=120 Identities=26% Similarity=0.286 Sum_probs=92.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
+|+|..+.+||+|||+|..-.++ ....+.||+|+|.+||++.+.+| +.++||||||+++|.+++|..||..
T Consensus 143 lLLd~~~nIKIADFGMAsLe~~g---klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD----- 214 (786)
T KOG0588|consen 143 LLLDVKNNIKIADFGMASLEVPG---KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD----- 214 (786)
T ss_pred hhhhcccCEeeeccceeecccCC---ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----
Confidence 47888888999999999764322 23455789999999999999987 5789999999999999999999963
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
.+.+....+.. .+. +.+|...+.+..+|+.+|+..||++|.|.+||++.
T Consensus 215 dNir~LLlKV~------------~G~---f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 215 DNIRVLLLKVQ------------RGV---FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ccHHHHHHHHH------------cCc---ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 22222222211 111 12345778899999999999999999999999863
No 19
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.89 E-value=2e-23 Score=140.67 Aligned_cols=127 Identities=26% Similarity=0.446 Sum_probs=92.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++................+++.|+|||.+.+..++.++|+||+|++++++++ |..||......+
T Consensus 155 il~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~ 234 (283)
T cd05048 155 CLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE 234 (283)
T ss_pred EEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 5788899999999999986543332222333456788999999888888999999999999999997 888986532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
....+... ... ..+..++..+.+++.+||+.||.+||++.++++.|++
T Consensus 235 --~~~~i~~~-----------~~~------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 --VIEMIRSR-----------QLL------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHHcC-----------CcC------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11111110 000 1123566789999999999999999999999999975
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=4.4e-23 Score=141.83 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=94.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-CCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||+..+..+||+|||+||...+.. ..+..+.|.||+|||++. +..|+.+.|+|++||+++|+.+-++.|.+...-|
T Consensus 141 iLi~~~~~iKiaDFGLARev~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D 217 (538)
T KOG0661|consen 141 ILISGNDVIKIADFGLAREVRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID 217 (538)
T ss_pred eEecccceeEecccccccccccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH
Confidence 577778899999999999886444 456678999999999865 4578999999999999999999999887643222
Q ss_pred ccHHHHHHhhcCCcccchh-h-----hhc-------cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVI-D-----ANL-------ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~-~-----~~~-------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..-.+.........+.. . ..+ .+..-....+ .+.++..+++.+|+.+||++|||++++++
T Consensus 218 --qi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 218 --QIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred --HHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 22222222221111111 1 011 1111111122 37788999999999999999999999885
No 21
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.89 E-value=1.1e-23 Score=148.26 Aligned_cols=135 Identities=21% Similarity=0.327 Sum_probs=95.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|++.++++|||+|||++..-.............|+.-|+|||++.-. +|+..+|||+||++.||+++|..||. +..
T Consensus 519 IFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~ 597 (678)
T KOG0193|consen 519 IFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQN 597 (678)
T ss_pred eEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCC
Confidence 67788899999999998763222222233445688889999986533 68899999999999999999999987 322
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
.+.++.. +. + ..+.++ .......++..+.+|+..||..++.+||.+.+|+..|+.+...
T Consensus 598 ~dqIifm-----VG---r----G~l~pd--~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 598 RDQIIFM-----VG---R----GYLMPD--LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred hhheEEE-----ec---c----cccCcc--chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 2211100 00 0 001111 0011136778899999999999999999999999999988875
No 22
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=3.5e-23 Score=137.89 Aligned_cols=140 Identities=21% Similarity=0.169 Sum_probs=93.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
++++.+..+||+|||+|+...........+..+.|.+|.|||.+... .|+.+.|+||.||++.||++|++.|.+...-
T Consensus 156 ll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v- 234 (359)
T KOG0660|consen 156 LLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV- 234 (359)
T ss_pred eeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH-
Confidence 57888999999999999987543222234667789999999986554 7999999999999999999999998753221
Q ss_pred ccHHHHHHhhcC------------Ccccchhhhhccccchh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLS------------GELTQVIDANLARDEQS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.....+-...+ ...+..+.........+ .....+..+..++|+.+||..||.+|+|++|+++
T Consensus 235 -~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 235 -HQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred -HHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111111111 11111221111111111 0112245678899999999999999999999884
No 23
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.88 E-value=1.3e-22 Score=136.60 Aligned_cols=131 Identities=24% Similarity=0.354 Sum_probs=94.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++...........+...++..|++||+..+..++.++|+||||++++++++ |..||.......
T Consensus 140 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~ 219 (279)
T cd05111 140 ILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE 219 (279)
T ss_pred EEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 5788899999999999987643332222333456778999999988888999999999999999997 888986532111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
....+.... .. ..+..+...+..++.+||..||++|||+.++++.|..+.+.
T Consensus 220 --~~~~~~~~~------------~~-----~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 220 --VPDLLEKGE------------RL-----AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred --HHHHHHCCC------------cC-----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 111111100 00 00112345678899999999999999999999999987764
No 24
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1e-23 Score=142.72 Aligned_cols=123 Identities=22% Similarity=0.294 Sum_probs=89.1
Q ss_pred CccCCC---CceEEcccccceecCCCCCcccccccccccccccccccCCCc---cccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDED---MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI---VSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
||+..+ ..+||+|||+|+.... .....+.||||.|.|||++.+.. ++.++|+||+||++|.+++|.+||..
T Consensus 307 ILl~~~~e~~llKItDFGlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~ 383 (475)
T KOG0615|consen 307 ILLSNDAEDCLLKITDFGLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSE 383 (475)
T ss_pred EEeccCCcceEEEecccchhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccc
Confidence 455544 7899999999998742 22344578999999999988764 34578999999999999999999986
Q ss_pred cccccccHHHHHHhhcCCcccchhhhhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
... +.++.+.+. .+... ..+......++.++++.++|..||++|||+.|+++
T Consensus 384 ~~~-~~sl~eQI~---------------~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 384 EYT-DPSLKEQIL---------------KGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred ccC-CccHHHHHh---------------cCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 432 222222111 11110 11223366788999999999999999999999983
No 25
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.88 E-value=5.7e-24 Score=153.59 Aligned_cols=134 Identities=28% Similarity=0.447 Sum_probs=102.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
||++.+..+|++|||+++.+.+..... ...+..-..+|.|||.+...+++.++||||||+++||+++ |..||=.+.+
T Consensus 762 ILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN- 840 (996)
T KOG0196|consen 762 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN- 840 (996)
T ss_pred eeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-
Confidence 789999999999999999875443221 1111223568999999999999999999999999999986 8888644322
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD 153 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~ 153 (159)
++++... ...++++.|++|+..+..||..||+.|-.+||.+.+|+..|+++...-.+
T Consensus 841 ----------------QdVIkaI--e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~S 897 (996)
T KOG0196|consen 841 ----------------QDVIKAI--EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNS 897 (996)
T ss_pred ----------------HHHHHHH--HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchh
Confidence 1122110 11233455779999999999999999999999999999999999876544
No 26
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.88 E-value=1.5e-22 Score=139.76 Aligned_cols=131 Identities=26% Similarity=0.411 Sum_probs=93.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++.+.........+...++..|+|||++.+..++.++|+||+||+++++++ |..||......+
T Consensus 204 ill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~ 283 (337)
T cd05054 204 ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE 283 (337)
T ss_pred EEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH
Confidence 5788899999999999987643322222233445678999999988889999999999999999997 999986532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
.....+.... . . ..+......+.+++.+||+.+|++||++.++++.|+++.+
T Consensus 284 -~~~~~~~~~~----~--------~-----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 284 -EFCRRLKEGT----R--------M-----RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred -HHHHHHhccC----C--------C-----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1111111100 0 0 0011334578899999999999999999999999998876
No 27
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=7.6e-23 Score=141.52 Aligned_cols=139 Identities=21% Similarity=0.221 Sum_probs=95.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||||.+|.+||+|||+|+++...... ..+..+-|.||.|||.+.+. .|+.+.|+||.||++.|++.|++.|++.. +
T Consensus 249 iLidn~G~LKiaDFGLAr~y~~~~~~-~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t--E 325 (560)
T KOG0600|consen 249 ILIDNNGVLKIADFGLARFYTPSGSA-PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT--E 325 (560)
T ss_pred eEEcCCCCEEeccccceeeccCCCCc-ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc--H
Confidence 79999999999999999988654433 35556689999999998887 79999999999999999999999987632 2
Q ss_pred ccHHHHHHhhcC----Cccc--c-----hhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLS----GELT--Q-----VIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~----~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......+.+... ..|. . .+.+.......-+......+...++|+..+|..||++|.|+.+++.
T Consensus 326 veQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 326 VEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred HHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 222222211111 1122 0 0000000001111223344677889999999999999999998774
No 28
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.88 E-value=2.4e-22 Score=135.94 Aligned_cols=131 Identities=26% Similarity=0.432 Sum_probs=94.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++............+...++..|+|||++.+..++.++|+||||++++++++ |..||......+
T Consensus 151 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~ 230 (288)
T cd05093 151 CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 230 (288)
T ss_pred EEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 5788999999999999976543322222233445778999999988888999999999999999998 888886533211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
....+.. .... . .+...+..+.+++.+||+.||.+|||+.++++.|+++.+.
T Consensus 231 --~~~~i~~---~~~~--------~------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 231 --VIECITQ---GRVL--------Q------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred --HHHHHHc---CCcC--------C------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1111111 0000 0 0112345789999999999999999999999999999865
No 29
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=2.1e-23 Score=145.83 Aligned_cols=121 Identities=21% Similarity=0.337 Sum_probs=86.9
Q ss_pred CCceEEcccccceecCCCCCcccccccccccccccccccCCC-----------ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-----------IVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-----------~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
+|.+||+|||.|..+............+||+-||+||.+..- +.+.++||||+||++|+|+.|+.||..
T Consensus 495 kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~ 574 (677)
T KOG0596|consen 495 KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ 574 (677)
T ss_pred eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence 478999999999988766666667778999999999965321 256789999999999999999999875
Q ss_pred cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
... .+. .+..+.++......+..+ ....+.++|+.||..||.+|||+.+||+
T Consensus 575 ~~n-------~~a-----Kl~aI~~P~~~Iefp~~~----~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 575 IIN-------QIA-----KLHAITDPNHEIEFPDIP----ENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHH-------HHH-----HHHhhcCCCccccccCCC----CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 321 111 112233332222111111 1123899999999999999999999984
No 30
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.88 E-value=2.8e-22 Score=135.78 Aligned_cols=131 Identities=25% Similarity=0.417 Sum_probs=94.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++................++..|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus 154 il~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 233 (291)
T cd05094 154 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE 233 (291)
T ss_pred EEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 5788899999999999976543322222233456788999999888888899999999999999998 899975532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
....... ..... .+..++..+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus 234 --~~~~~~~---~~~~~--------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 234 --VIECITQ---GRVLE--------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred --HHHHHhC---CCCCC--------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111110 00000 0112456788999999999999999999999999999764
No 31
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.88 E-value=3.4e-23 Score=139.14 Aligned_cols=130 Identities=24% Similarity=0.326 Sum_probs=89.4
Q ss_pred CccCC-CCceEEcccccceecCC-CCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDE-DMVAHVSDFGISKLLGD-GDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~-~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
||++. ++.+||+|||.+..... ...........||+.|+|||++.+. ....++|+||+||++.||++|+.||... .
T Consensus 148 iLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~ 226 (313)
T KOG0198|consen 148 ILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-F 226 (313)
T ss_pred EEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-c
Confidence 57888 79999999999987642 1112223346799999999998853 2335899999999999999999998763 0
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
..... ........... ..|...+....+++.+|++.||.+|||+.+++....-.
T Consensus 227 ~~~~~--~~~ig~~~~~P--------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 227 EEAEA--LLLIGREDSLP--------------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred chHHH--HHHHhccCCCC--------------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 00000 01110000000 12234566789999999999999999999999765443
No 32
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.88 E-value=2.4e-22 Score=140.42 Aligned_cols=130 Identities=22% Similarity=0.374 Sum_probs=91.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++...............++..|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus 243 il~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~ 322 (374)
T cd05106 243 VLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS 322 (374)
T ss_pred EEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH
Confidence 5788889999999999987543322222222335667999999888888999999999999999997 999986542211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
......... .... .+...+..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus 323 -~~~~~~~~~------------~~~~-----~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 323 -KFYKMVKRG------------YQMS-----RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -HHHHHHHcc------------cCcc-----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 111111100 0000 01123457889999999999999999999999998864
No 33
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.87 E-value=3.5e-22 Score=134.54 Aligned_cols=131 Identities=20% Similarity=0.292 Sum_probs=94.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++.+.............++..|+|||++.+..++.++|+||+|++++++++ |..||.....
T Consensus 148 il~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-- 225 (280)
T cd05043 148 CVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-- 225 (280)
T ss_pred EEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--
Confidence 5778889999999999986643332222222345667999999888888999999999999999998 9999865321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
.....+...... . ..+..++..+.+++.+||..||++|||+.++++.|+.+.++
T Consensus 226 ~~~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 226 FEMAAYLKDGYR------------L-----AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHHHHHHcCCC------------C-----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 111111111100 0 00113456789999999999999999999999999998875
No 34
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.5e-22 Score=145.69 Aligned_cols=123 Identities=25% Similarity=0.310 Sum_probs=90.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++.+.............||+.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus 174 ILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--- 250 (496)
T PTZ00283 174 ILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--- 250 (496)
T ss_pred EEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH---
Confidence 67889999999999999876433222223345789999999999888899999999999999999999999864321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............ . +.+...+..+.+++.+||+.||.+||++.+++.
T Consensus 251 --~~~~~~~~~~~~--------~------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 251 --EEVMHKTLAGRY--------D------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred --HHHHHHHhcCCC--------C------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 111111111100 0 012244567889999999999999999999985
No 35
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-22 Score=144.70 Aligned_cols=115 Identities=20% Similarity=0.238 Sum_probs=89.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||+|..|.+||+|||+|+..-. .....++.+|||.|+|||++....|+.++|.|+||+++|||+.|+.||.+...
T Consensus 499 iLLD~eGh~kiADFGlcKe~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE--- 573 (694)
T KOG0694|consen 499 LLLDTEGHVKIADFGLCKEGMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE--- 573 (694)
T ss_pred eEEcccCcEEecccccccccCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH---
Confidence 6899999999999999987431 22245668999999999999999999999999999999999999999975321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
.++++..+..++. .|.....+..++|.+.+..+|.+|.-+
T Consensus 574 --------------ee~FdsI~~d~~~---yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 574 --------------EEVFDSIVNDEVR---YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred --------------HHHHHHHhcCCCC---CCCcccHHHHHHHHHHhccCcccccCC
Confidence 2223332222211 133566788899999999999999876
No 36
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.87 E-value=1.2e-22 Score=135.49 Aligned_cols=125 Identities=26% Similarity=0.447 Sum_probs=85.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++................+...|+|||.+.+..++.++||||||++++|+++ |..||.....
T Consensus 134 ill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-- 211 (259)
T PF07714_consen 134 ILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-- 211 (259)
T ss_dssp EEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 5788899999999999987633333222333446778999999988889999999999999999999 6788754311
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
......+.... ....+..++..+.+++..||..||.+|||+.++++.|
T Consensus 212 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 212 EEIIEKLKQGQ-----------------RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHHHTTE-----------------ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccccccccc-----------------cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11111111100 0011224566788999999999999999999999876
No 37
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.87 E-value=7.1e-23 Score=136.78 Aligned_cols=114 Identities=28% Similarity=0.270 Sum_probs=83.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||+|.+|+++|+|||+|+..... .....+.+||+.|+|||++...+|+.++|.||+|+++|+|++|.+||.....
T Consensus 156 ILLd~~GHi~LtDFgL~k~~~~~--~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~--- 230 (357)
T KOG0598|consen 156 ILLDEQGHIKLTDFGLCKEDLKD--GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV--- 230 (357)
T ss_pred eeecCCCcEEEeccccchhcccC--CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH---
Confidence 79999999999999999864322 2233447999999999999999999999999999999999999999975321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI 135 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp 135 (159)
..++....... +.. .+.-......+++.+.+..||.+|.
T Consensus 231 --~~~~~~I~~~k--------~~~------~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 231 --KKMYDKILKGK--------LPL------PPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred --HHHHHHHhcCc--------CCC------CCccCCHHHHHHHHHHhccCHHHhc
Confidence 11111111111 000 0111345678899999999999996
No 38
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.87 E-value=5.9e-22 Score=133.34 Aligned_cols=126 Identities=31% Similarity=0.473 Sum_probs=89.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...............+++.|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus 153 ili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~ 232 (280)
T cd05049 153 CLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE 232 (280)
T ss_pred EEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 5788899999999999976533222222233345778999999988889999999999999999998 999986432211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
....+.. .. ... .+...+..+.+++.+||..||++||++.|+++.|+
T Consensus 233 --~~~~~~~---~~--------~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 233 --VIECITQ---GR--------LLQ------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --HHHHHHc---CC--------cCC------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111110 00 000 01134567899999999999999999999999886
No 39
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.87 E-value=6.1e-22 Score=145.27 Aligned_cols=131 Identities=23% Similarity=0.403 Sum_probs=95.1
Q ss_pred CccCCCCceEEcccccceecCCCCCccccccc-ccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~-~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
||+.++..+||+|||+++...+.+.+...... .-...|+|||.+....|+.++||||||+++||+++ |..||.+...
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~- 527 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP- 527 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-
Confidence 68888999999999999876544433322111 12345999999999899999999999999999987 7788765221
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
...+.+++. ..+...+|..|..++.++|+.||+.+|++||++.++...++....
T Consensus 528 ~~~l~~~l~-----------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 528 TEELLEFLK-----------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHHHHHHHh-----------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 011111111 111222345678889999999999999999999999999999654
No 40
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.87 E-value=3.3e-22 Score=142.43 Aligned_cols=128 Identities=23% Similarity=0.337 Sum_probs=96.6
Q ss_pred ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccccc
Q 035782 2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGEM 80 (159)
Q Consensus 2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~~ 80 (159)
|+.++..||++|||+++.+...... .+.+..-...|.|||.+....++.++|||+||+++||+.+ |..||.++..
T Consensus 397 LVgEnhiVKvADFGLsRlMtgDTYT-AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl--- 472 (1157)
T KOG4278|consen 397 LVGENHIVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--- 472 (1157)
T ss_pred cccccceEEeeccchhhhhcCCcee-cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH---
Confidence 6788899999999999998643322 2222334567999999988889999999999999999986 7788766431
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
.+. -.++.. .++...|..|++.+.+||+.||+.+|++||++.|+.+.++.+-+
T Consensus 473 --SqV---------Y~LLEk-----gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 473 --SQV---------YGLLEK-----GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred --HHH---------HHHHhc-----cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 000 112221 12223456899999999999999999999999999999987643
No 41
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.87 E-value=9.1e-22 Score=131.90 Aligned_cols=128 Identities=26% Similarity=0.419 Sum_probs=91.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|++++++.+||+|||+++.+.............++..|++||++.+..++.++|+||+|++++++++ |..||......
T Consensus 144 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~- 222 (273)
T cd05035 144 CMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH- 222 (273)
T ss_pred EEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 5778889999999999987643332222222234567999999888788899999999999999998 88888653211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
......... .. ...+..++..+.+++.+||+.||++|||+.++++.|+++
T Consensus 223 -~~~~~~~~~---~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 223 -EIYDYLRHG---NR--------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -HHHHHHHcC---CC--------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111111110 00 001124556789999999999999999999999999876
No 42
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.87 E-value=7.3e-22 Score=127.22 Aligned_cols=138 Identities=18% Similarity=0.217 Sum_probs=93.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
+|++.+|.+||+|||+++.+......... .+-|.+|.|||.+.+. .|+..+|+||.||++.|++.|.+-|.+.. +
T Consensus 132 LLis~~g~lKiADFGLAr~f~~p~~~~~~--~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s--D 207 (318)
T KOG0659|consen 132 LLISSDGQLKIADFGLARFFGSPNRIQTH--QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS--D 207 (318)
T ss_pred eEEcCCCcEEeecccchhccCCCCccccc--ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc--h
Confidence 58899999999999999998755544332 3678999999988876 68999999999999999999887776532 2
Q ss_pred ccHHHHHHhhc----CCcccchh---h---hhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSL----SGELTQVI---D---ANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~----~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......+.... ...|.++. + -...+.+........+....++++.++|..||.+|+|+.|+++
T Consensus 208 idQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 208 IDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred HHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 22222221111 11122211 1 0001111111123355667899999999999999999999885
No 43
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.87 E-value=6.5e-22 Score=138.32 Aligned_cols=129 Identities=20% Similarity=0.338 Sum_probs=90.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++...............++..|+|||++.+..++.++|+||||++++++++ |..||.......
T Consensus 245 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~ 324 (375)
T cd05104 245 ILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS 324 (375)
T ss_pred EEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH
Confidence 5778889999999999987643322222222335667999999988889999999999999999997 788876532111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.....+.... . .. .+...+..+.+++..||+.||++|||+.++++.|++.
T Consensus 325 -~~~~~~~~~~----~--------~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 325 -KFYKMIKEGY----R--------ML-----SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -HHHHHHHhCc----c--------CC-----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 1111111110 0 00 0112345688999999999999999999999998863
No 44
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.86 E-value=9.4e-22 Score=133.96 Aligned_cols=133 Identities=26% Similarity=0.369 Sum_probs=89.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~ 78 (159)
||++.++.+||+|||+++...............++..|+|||++....++.++|+||||++++++++ +..||......
T Consensus 169 ill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 248 (304)
T cd05096 169 CLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE 248 (304)
T ss_pred eEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH
Confidence 5788999999999999987643332222233445778999999888888999999999999999986 45666543211
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
................. . ...+..++..+.+++.+||+.||.+|||+.+|.+.|+
T Consensus 249 --~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 249 --QVIENAGEFFRDQGRQV----Y------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred --HHHHHHHHHhhhccccc----c------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 11111111100000000 0 0011235567899999999999999999999988875
No 45
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.86 E-value=1.1e-21 Score=131.54 Aligned_cols=128 Identities=27% Similarity=0.446 Sum_probs=90.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++.+.............+++.|++||+..+..++.++|+||+|++++++++ |..||......
T Consensus 143 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~- 221 (272)
T cd05075 143 CMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS- 221 (272)
T ss_pred eEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 5788899999999999987643332211222345667999999888888999999999999999998 78888653211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.....+.. .... . .+...+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 222 -~~~~~~~~---~~~~--------~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 222 -EIYDYLRQ---GNRL--------K------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -HHHHHHHc---CCCC--------C------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11111111 0000 0 0113455688999999999999999999999999875
No 46
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.86 E-value=6.2e-22 Score=133.52 Aligned_cols=127 Identities=24% Similarity=0.373 Sum_probs=89.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|++++++.+||+|||+++...............+++.|+|||+..+..++.++|+||+|++++++++ |..||......
T Consensus 155 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~- 233 (283)
T cd05091 155 VLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ- 233 (283)
T ss_pred eEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 5678889999999999876543322222233445778999999887788899999999999999997 77787643211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
.....+. .... . ..+..++..+.+++..||+.+|.+||++.+|+..|+.
T Consensus 234 -~~~~~i~---~~~~--------~------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 -DVIEMIR---NRQV--------L------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -HHHHHHH---cCCc--------C------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111111 1100 0 0122456678899999999999999999999999874
No 47
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.86 E-value=1.5e-21 Score=131.39 Aligned_cols=132 Identities=20% Similarity=0.302 Sum_probs=92.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++...............+++.|++||...+..++.++|+||||++++++++ |..||......
T Consensus 140 il~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 218 (279)
T cd05109 140 VLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR- 218 (279)
T ss_pred EEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 5778889999999999987643222211122234567999999888888999999999999999987 88887643211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
.....+..... . +.+..++..+.+++..||+.||++||++.++++.|+++....
T Consensus 219 -~~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 219 -EIPDLLEKGER------------L-----PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred -HHHHHHHCCCc------------C-----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 11111111100 0 001134557889999999999999999999999998876543
No 48
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.86 E-value=6.4e-22 Score=142.13 Aligned_cols=123 Identities=24% Similarity=0.257 Sum_probs=89.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++.+............+||+.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus 200 Ill~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--- 276 (478)
T PTZ00267 200 IFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--- 276 (478)
T ss_pred EEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---
Confidence 68899999999999999876433322223445699999999999888899999999999999999999999864221
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
........... ... .+......+.+++.+||..||++||++.+++.
T Consensus 277 --~~~~~~~~~~~--------~~~------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 277 --REIMQQVLYGK--------YDP------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --HHHHHHHHhCC--------CCC------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11111111000 000 01133456889999999999999999999874
No 49
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.86 E-value=8.1e-22 Score=134.96 Aligned_cols=132 Identities=24% Similarity=0.366 Sum_probs=93.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++.+.............++..|++||++.+..++.++|+||||+++|++++ |..||.......
T Consensus 140 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~ 219 (316)
T cd05108 140 VLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 219 (316)
T ss_pred eEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 5788899999999999987653332222222334667999999988888999999999999999987 888886432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
......... ..+.+..+...+.+++..||..+|++||++.+++..|..+....
T Consensus 220 --~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 220 --ISSILEKGE-----------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred --HHHHHhCCC-----------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 111111000 00011234456889999999999999999999999998887653
No 50
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.86 E-value=1.1e-21 Score=133.15 Aligned_cols=132 Identities=13% Similarity=0.050 Sum_probs=91.1
Q ss_pred CccCCCCceEEcccccceecCCCCCc-----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
||++.++.++|+|||+++.+...... .......||+.|+|||+..+..++.++|+||+|++++++++|..||...
T Consensus 157 ill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 157 IMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 57888999999999999876432211 1112245899999999988888999999999999999999999999764
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
.... ........ +++.+...... ....++..+.+++..||..+|++||++.++++.|
T Consensus 237 ~~~~-~~~~~~~~-------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 237 GHNG-NLIHAAKC-------DFIKRLHEGKI----KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred ccch-HHHHHhHH-------HHHHHhhhhhh----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 2211 11100000 00010000000 0113456788999999999999999999999876
No 51
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.86 E-value=2.6e-21 Score=131.76 Aligned_cols=132 Identities=23% Similarity=0.379 Sum_probs=93.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++.+.............+++.|+|||++.+..++.++|+||||++++++++ |..||.....
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-- 245 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-- 245 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--
Confidence 5788889999999999987643332222222345678999999988888999999999999999997 6777754321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
........... . ...+..++..+.+++.+||+.+|++|||+.++++.|+++....
T Consensus 246 ---~~~~~~~~~~~-~-------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 246 ---EELFKLLKEGH-R-------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred ---HHHHHHHHcCC-c-------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 11111100000 0 0011245667889999999999999999999999999987654
No 52
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.86 E-value=2.1e-21 Score=131.45 Aligned_cols=130 Identities=27% Similarity=0.398 Sum_probs=92.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|++++++.+||+|||+++...............++..|++||+..+..++.++|+||||++++++++ |..||......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 5788899999999999976543332222223345678999998888788899999999999999998 88888643211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
........ .... ..+...+..+.+++..||+.+|.+||++.++++.|+++..
T Consensus 237 -~~~~~~~~------------~~~~-----~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 -RLFNLLKT------------GYRM-----ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -HHHHHHhC------------CCCC-----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11111110 0000 0112345678899999999999999999999999999865
No 53
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.86 E-value=3e-22 Score=140.79 Aligned_cols=119 Identities=25% Similarity=0.356 Sum_probs=93.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||+++.|.+|+||||+|+.+.. .....+...|||.|||||.+.+.+|+..+|.||+||++||+..|++||....
T Consensus 131 iLl~~~~~~KlcdFg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s---- 204 (808)
T KOG0597|consen 131 ILLEKGGTLKLCDFGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS---- 204 (808)
T ss_pred eeecCCCceeechhhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH----
Confidence 7899999999999999998853 3445666789999999999999999999999999999999999999985421
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
+.+++...+..... -|......+.+++...+..||.+|.|..+++
T Consensus 205 -------------i~~Lv~~I~~d~v~---~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll 249 (808)
T KOG0597|consen 205 -------------ITQLVKSILKDPVK---PPSTASSSFVNFLQGLLIKDPAQRLTWTDLL 249 (808)
T ss_pred -------------HHHHHHHHhcCCCC---CcccccHHHHHHHHHHhhcChhhcccHHHHh
Confidence 11222211111111 1225667789999999999999999999887
No 54
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.86 E-value=1.3e-21 Score=132.61 Aligned_cols=129 Identities=28% Similarity=0.435 Sum_probs=90.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++.+.............++..|+|||++.+..++.++|+||||++++++++ |..||.......
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 5778899999999999987643322211222234567999999888888999999999999999997 888875432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
........ ... ..+..+...+.+++.+||..||.+|||+.++++.|+++.
T Consensus 243 --~~~~~~~~------------~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 --LFKLLKEG------------YRM-----EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred --HHHHHHcC------------CcC-----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11111000 000 011234567889999999999999999999999999875
No 55
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=8e-22 Score=136.63 Aligned_cols=119 Identities=25% Similarity=0.279 Sum_probs=88.0
Q ss_pred CccCCC-CceEEcccccceecCCCCCcccccccccccccccccccCCCc-cc-cchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VS-TKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~-~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
||++.+ +.+||+|||++.... .........+||+.|+|||++.+.. |. .++||||+|+++|.|++|..||....
T Consensus 151 illd~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~- 227 (370)
T KOG0583|consen 151 ILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN- 227 (370)
T ss_pred EEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-
Confidence 578888 999999999998873 1122345578999999999998876 75 78999999999999999999997622
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHH-HHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDC-LSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
....+....... .. .|... ...+..++.+|+..||.+|+|+.+++
T Consensus 228 ----~~~l~~ki~~~~-------------~~--~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 228 ----VPNLYRKIRKGE-------------FK--IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ----HHHHHHHHhcCC-------------cc--CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 111111111000 00 01122 56788999999999999999999999
No 56
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.86 E-value=2.4e-21 Score=129.54 Aligned_cols=130 Identities=20% Similarity=0.253 Sum_probs=92.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ ......+++.|+|||.+.+..++.++|+||+|++++++++|..||........
T Consensus 137 il~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~ 214 (267)
T cd08228 137 VFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF 214 (267)
T ss_pred EEEcCCCCEEECccccceeccchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence 5788899999999999887643221 12234578899999998887788899999999999999999999854322111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
.....+.. .... +. .....+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus 215 ~~~~~~~~---~~~~--------~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 215 SLCQKIEQ---CDYP--------PL-----PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHhc---CCCC--------CC-----ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 11111110 0000 00 01134567899999999999999999999999998764
No 57
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.86 E-value=9.1e-22 Score=141.29 Aligned_cols=125 Identities=23% Similarity=0.350 Sum_probs=92.3
Q ss_pred CccCCCCceEEcccccceecCCCCCccccccc-ccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~-~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
+|+...-.|||+|||+.+.+..++..+..... .-...|+|||.+....|+.++|||+||+++|||++ |+.||.+...
T Consensus 243 lllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g- 321 (1039)
T KOG0199|consen 243 LLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG- 321 (1039)
T ss_pred heecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-
Confidence 35566778999999999998766654432221 22446999999999999999999999999999997 6788765321
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
..+-..+. .....+.+..|++.+.++|+.||..+|.+|||+.+|...+
T Consensus 322 -----------------~qIL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 322 -----------------IQILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred -----------------HHHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 01111122 2233344568999999999999999999999999987443
No 58
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.86 E-value=8.4e-22 Score=132.91 Aligned_cols=140 Identities=20% Similarity=0.317 Sum_probs=92.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++......... ......++..|++||......++.++|+||+|++++++++|..|+......
T Consensus 138 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~- 216 (283)
T cd05080 138 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK- 216 (283)
T ss_pred EEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-
Confidence 578888999999999998764322211 112223556799999988778889999999999999999999887542211
Q ss_pred ccHHHHHHhhc----CCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSL----SGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 80 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
......... .......++... ..+.+...+..+.+++..||+.+|++|||+.+++..|+++.
T Consensus 217 --~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 217 --FEEMIGPKQGQMTVVRLIELLERGM-----RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred --hhhhhcccccccchhhhhhhhhcCC-----CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 000000000 000111111111 01112345678999999999999999999999999998875
No 59
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.86 E-value=1.4e-21 Score=132.17 Aligned_cols=137 Identities=20% Similarity=0.197 Sum_probs=89.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++...... ......|++.|+|||.+.+..++.++|+||+|++++++++|..||......+
T Consensus 141 il~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~- 216 (290)
T cd07862 141 ILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD- 216 (290)
T ss_pred EEEcCCCCEEEccccceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-
Confidence 578899999999999998764321 2233568999999999888888899999999999999999999987532211
Q ss_pred cHHHHHHhhc----CCcccchh---hhhccccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSL----SGELTQVI---DANLARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~----~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
....+.... +..+.... ......... ...........+.+++.+||+.||++|||+.++++
T Consensus 217 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 217 -QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred -HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 111111110 00110000 000000000 00011134566789999999999999999999985
No 60
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.86 E-value=1.9e-21 Score=131.03 Aligned_cols=126 Identities=26% Similarity=0.417 Sum_probs=88.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|++++++.+||+|||++..+.............+++.|+|||+..+..++.++|+||||++++++++ |..||......+
T Consensus 153 il~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 232 (280)
T cd05092 153 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE 232 (280)
T ss_pred EEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH
Confidence 5788899999999999976543222222222335678999999888888999999999999999998 888875432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
......... . ...+..++..+.+++.+||+.||.+||++.+|++.|+
T Consensus 233 --~~~~~~~~~---------------~--~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 233 --AIECITQGR---------------E--LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred --HHHHHHcCc---------------c--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111110000 0 0011234567889999999999999999999998886
No 61
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.86 E-value=3.5e-21 Score=131.36 Aligned_cols=134 Identities=25% Similarity=0.375 Sum_probs=93.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.+................+++.|+|||++.+..++.++|+||+|++++++++ |..||......
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~- 249 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE- 249 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH-
Confidence 5788899999999999876543222111122234567999999888888899999999999999998 77887542211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD 153 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~ 153 (159)
......... .. ...+...+..+.+++.+||+.+|++|||+.++++.|+++.+....
T Consensus 250 -~~~~~~~~~------------~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~~ 305 (307)
T cd05098 250 -ELFKLLKEG------------HR-----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTSN 305 (307)
T ss_pred -HHHHHHHcC------------CC-----CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhhc
Confidence 011111100 00 001123456788999999999999999999999999999887543
No 62
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.86 E-value=7.4e-22 Score=126.34 Aligned_cols=116 Identities=19% Similarity=0.191 Sum_probs=85.7
Q ss_pred CceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHH
Q 035782 7 MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWV 86 (159)
Q Consensus 7 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~ 86 (159)
--+||+|||++....++. ...+..|||+|++||+++..+|+..+|+|++|+++|-++.|.+||.+....
T Consensus 150 A~vKL~~FGvAi~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-------- 218 (355)
T KOG0033|consen 150 AAVKLADFGLAIEVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------- 218 (355)
T ss_pred CceeecccceEEEeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH--------
Confidence 468999999999886332 344577999999999999999999999999999999999999998652211
Q ss_pred HhhcCCcccchhhhhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 87 NKSLSGELTQVIDANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.+..+....... +.+......++..+|+++|+..||++|+|+.|.|+
T Consensus 219 ---------rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 219 ---------RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ---------HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 111111111100 00112355677889999999999999999999884
No 63
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.85 E-value=1.9e-21 Score=136.81 Aligned_cols=131 Identities=20% Similarity=0.398 Sum_probs=93.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++...............++..|+|||.+.+..++.++|+||||++++++++ |..||.......
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 5788889999999999987543322222223346778999999888888999999999999999996 888886532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
. ....+... . ....+..++..+.+++.+||+.||++|||+.+|.+.|+++.+
T Consensus 348 ~-~~~~~~~~------------~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 T-FYNKIKSG------------Y-----RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred H-HHHHHhcC------------C-----CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1 10111000 0 000112455678999999999999999999999999998754
No 64
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.85 E-value=7.1e-22 Score=128.18 Aligned_cols=123 Identities=26% Similarity=0.272 Sum_probs=88.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
||+|..|.+|+||||.+..+.+ +...+...|-+.|||||.+... +|..++||||||++++|+.+|+.||.....
T Consensus 223 ILlDe~GniKlCDFGIsGrlvd---SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t 299 (391)
T KOG0983|consen 223 ILLDERGNIKLCDFGISGRLVD---SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT 299 (391)
T ss_pred eEEccCCCEEeecccccceeec---ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc
Confidence 7999999999999999977643 2234445688899999987543 688899999999999999999999987543
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+ ......+.... ++..+.-..-.+.+.+++..||..|+.+||...++++
T Consensus 300 d-Fe~ltkvln~e---------------PP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 300 D-FEVLTKVLNEE---------------PPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred c-HHHHHHHHhcC---------------CCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 2 22211111111 1111111123457889999999999999999988874
No 65
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.85 E-value=2.2e-21 Score=130.46 Aligned_cols=126 Identities=24% Similarity=0.405 Sum_probs=88.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++................+++.|+|||++.+..++.++|+||||++++++++ |..||......
T Consensus 150 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~- 228 (277)
T cd05062 150 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE- 228 (277)
T ss_pred EEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 5788899999999999876543322222222345778999999888788999999999999999998 67887543211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
....... ..... . .+..++..+.+++.+||+.||++|||+.++++.|+
T Consensus 229 -~~~~~~~---~~~~~--------~------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 229 -QVLRFVM---EGGLL--------D------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred -HHHHHHH---cCCcC--------C------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1111110 00000 0 01234567899999999999999999999998876
No 66
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.85 E-value=1.2e-21 Score=135.19 Aligned_cols=140 Identities=19% Similarity=0.199 Sum_probs=87.8
Q ss_pred CccCCCCceEEcccccceecCCCCC-cccccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
||++.++.+||+|||+++....... ........|++.|+|||++.+ ..++.++|+||+|++++++++|+.||.....
T Consensus 134 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~ 213 (338)
T cd07859 134 ILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV 213 (338)
T ss_pred eEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh
Confidence 6789999999999999976432211 112234568999999998765 4678899999999999999999999865321
Q ss_pred ccccHHHHHHhhcC------------Ccccchhhhhccccchhh-hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLS------------GELTQVIDANLARDEQSF-FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
. .....+..... ......+.......+... .........+.+++.+||..||++|||++++++
T Consensus 214 ~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 214 V--HQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred H--HHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1 00011100000 000111111111100000 000123456789999999999999999999984
No 67
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.85 E-value=1.6e-21 Score=131.81 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=88.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ .......|++.|+|||++.+..++.++|+||+|++++++++|+.||......+.
T Consensus 131 ill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~ 209 (287)
T cd07848 131 LLISHNDVLKLCDFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ 209 (287)
T ss_pred EEEcCCCcEEEeeccCccccccccc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 5788999999999999987643221 122335688999999998888889999999999999999999999975322111
Q ss_pred cHHHHHHhhc---C----------Ccccchhhhhccc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSL---S----------GELTQVIDANLAR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~---~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.. .+.... + ........+.... ...........+..+.+++.+||+.||.+|||+.++++
T Consensus 210 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 210 -LF-TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred -HH-HHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00 000000 0 0000000000000 00000001124557899999999999999999999875
No 68
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.85 E-value=4e-21 Score=131.45 Aligned_cols=135 Identities=24% Similarity=0.390 Sum_probs=94.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...............++..|++||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 5778899999999999986543222111112234457999999888888999999999999999998 788875432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD 154 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~ 154 (159)
......... ....+..++..+.+++.+||+.+|++|||+.++++.|+++.....++
T Consensus 245 --~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~ 300 (314)
T cd05099 245 --LFKLLREGH-----------------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEE 300 (314)
T ss_pred --HHHHHHcCC-----------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCC
Confidence 111111000 00011234567889999999999999999999999999998765443
No 69
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.85 E-value=1.1e-21 Score=131.92 Aligned_cols=126 Identities=25% Similarity=0.430 Sum_probs=89.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...............++..|+|||.+.+..++.++|+||||++++++++ |..||......
T Consensus 150 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 228 (277)
T cd05032 150 CMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE- 228 (277)
T ss_pred EEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-
Confidence 5788999999999999986644332222233446778999999887788899999999999999998 88888542211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
........ .. . ...+..++..+.+++.+||+.+|++|||+.+++..|+
T Consensus 229 -~~~~~~~~---~~--------~------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 229 -EVLKFVID---GG--------H------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -HHHHHHhc---CC--------C------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11111110 00 0 0011233567899999999999999999999998875
No 70
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.85 E-value=4.7e-21 Score=128.02 Aligned_cols=127 Identities=23% Similarity=0.360 Sum_probs=89.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++......... ......++..|++||...+..++.++|+||||++++++++ |..||......+
T Consensus 135 il~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~ 213 (263)
T cd05052 135 CLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 213 (263)
T ss_pred EEEcCCCcEEeCCCccccccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 57888999999999999876432211 1111224567999999888888899999999999999998 888876432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
....+... ... ..+...+..+.+++.+||..||++|||+.++++.|+++
T Consensus 214 --~~~~~~~~------------~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 214 --VYELLEKG------------YRM-----ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred --HHHHHHCC------------CCC-----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11111100 000 01123456799999999999999999999999999875
No 71
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.85 E-value=4.9e-21 Score=127.54 Aligned_cols=128 Identities=27% Similarity=0.371 Sum_probs=90.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
|+++.++.+||+|||++.......... ......++..|+|||.+....++.++|+||||++++++++ |..||......
T Consensus 126 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 205 (257)
T cd05116 126 VLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN 205 (257)
T ss_pred EEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 577888999999999998764332211 1122234578999999887778889999999999999997 89998653221
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.....+..... . ..+..++..+.+++.+||+.||++||++.+|.+.|++.
T Consensus 206 --~~~~~i~~~~~------------~-----~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 206 --EVTQMIESGER------------M-----ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --HHHHHHHCCCC------------C-----CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 11111211100 0 01124556789999999999999999999999998763
No 72
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.85 E-value=2.8e-21 Score=131.56 Aligned_cols=129 Identities=20% Similarity=0.346 Sum_probs=90.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+|++|||++................++..|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus 172 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~ 251 (302)
T cd05055 172 VLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS 251 (302)
T ss_pred EEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH
Confidence 5778889999999999986643332222222345678999999888888899999999999999998 888886532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
......... .... .+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 252 -~~~~~~~~~------------~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 252 -KFYKLIKEG------------YRMA-----QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -HHHHHHHcC------------CcCC-----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 111111100 0000 0112345789999999999999999999999999875
No 73
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=6.6e-21 Score=130.36 Aligned_cols=142 Identities=20% Similarity=0.324 Sum_probs=104.7
Q ss_pred CccCCCCceEEcccccceecCCCCC--cccccccccccccccccccCCC----cc--ccchhhHhHHHHHHHHHhc----
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD--SVTQTMTMATIGYMAPEYGSEG----IV--STKCDVYSYGVLLMETFTR---- 68 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~~~~pe~~~~~----~~--~~~~dv~s~g~~~~~~~~~---- 68 (159)
||+.++|++.|+|+|+|........ ....+..+||.+|||||++... .+ -..+||||||.++||+..+
T Consensus 347 ILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~g 426 (513)
T KOG2052|consen 347 ILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESG 426 (513)
T ss_pred EEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcC
Confidence 7899999999999999977643211 1233456799999999987653 12 1469999999999999874
Q ss_pred ------CCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 69 ------KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 69 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+.||....+.++++.+...-.- .+.+.+..+.+.........+.++|+.||..+|+.|.|+-.+.+
T Consensus 427 gi~eey~~Pyyd~Vp~DPs~eeMrkVVC--------v~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK 498 (513)
T KOG2052|consen 427 GIVEEYQLPYYDVVPSDPSFEEMRKVVC--------VQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK 498 (513)
T ss_pred CEehhhcCCcccCCCCCCCHHHHhccee--------ecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence 3677777777776655432211 22233333333444577888999999999999999999999999
Q ss_pred HHHHHHHH
Q 035782 143 KLKKIKEK 150 (159)
Q Consensus 143 ~l~~~~~~ 150 (159)
.|.++.+.
T Consensus 499 tl~~l~~~ 506 (513)
T KOG2052|consen 499 TLAKLSNS 506 (513)
T ss_pred HHHHHhcC
Confidence 99999863
No 74
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.85 E-value=6.3e-21 Score=129.89 Aligned_cols=132 Identities=23% Similarity=0.333 Sum_probs=93.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...............++..|++||++.+..++.++|+||||++++++++ |..||.....
T Consensus 140 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-- 217 (303)
T cd05110 140 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-- 217 (303)
T ss_pred eeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 5778889999999999987643222222222345678999999888888999999999999999987 8888854321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
.....+...... . +.+..++..+..++..||..+|++||++.++++.|+++.+..
T Consensus 218 ~~~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 218 REIPDLLEKGER------------L-----PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred HHHHHHHHCCCC------------C-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 111111111000 0 001123456889999999999999999999999999987654
No 75
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.85 E-value=3.9e-21 Score=128.00 Aligned_cols=129 Identities=29% Similarity=0.445 Sum_probs=91.6
Q ss_pred CccCCCCceEEcccccceecCCCCCccc-ccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
|+++.++.+||+|||+++.......... .....++..|++||...+..++.++|+||||++++++++ |..||.....
T Consensus 126 ili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~- 204 (257)
T cd05060 126 VLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG- 204 (257)
T ss_pred EEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-
Confidence 5788899999999999987643332211 111223467999999888888999999999999999997 8999865321
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
......+..... ...+..++..+.+++.+||..+|++||++.++++.|+++.
T Consensus 205 -~~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 205 -AEVIAMLESGER-----------------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -HHHHHHHHcCCc-----------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 111121111100 0111234567899999999999999999999999998763
No 76
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.85 E-value=5.2e-21 Score=129.06 Aligned_cols=127 Identities=27% Similarity=0.433 Sum_probs=89.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||++................++..|++||++.+..++.++|+||+|++++++++ |..||.....
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-- 232 (283)
T cd05090 155 ILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-- 232 (283)
T ss_pred EEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 5788899999999999987643332222233445677999999887788999999999999999998 8888754321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
............ .+.+..++..+.+++..||+.||.+||++.++++.|+.
T Consensus 233 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 QEVIEMVRKRQL-----------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHcCCc-----------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111111000 00112345678899999999999999999999988764
No 77
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.84 E-value=2.4e-21 Score=131.36 Aligned_cols=133 Identities=24% Similarity=0.318 Sum_probs=88.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~ 78 (159)
|+++.++.++|+|||+++...............+++.|+|||+..+..++.++|+||||++++++++ +..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD- 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence 5788889999999999986543332222333456778999999888788999999999999999987 5667654221
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
................. .....+...+..+.+++.+||+.||++|||+.+|++.|+
T Consensus 240 -~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 -QQVIENAGHFFRDDGRQ----------IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred -HHHHHHHHhcccccccc----------ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 11111111100000000 000011234567999999999999999999999998875
No 78
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.84 E-value=8.6e-21 Score=126.89 Aligned_cols=129 Identities=19% Similarity=0.247 Sum_probs=91.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ ......++..|+|||...+..++.++|+||+|++++++++|..||.....+..
T Consensus 137 ili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08229 137 VFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred EEEcCCCCEEECcchhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence 5788899999999999877643221 12234578899999998888888899999999999999999999854321111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
........ ....+. .....+..+.+++.+||+.||++|||+.+|++.+.++
T Consensus 215 ~~~~~~~~-----------~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 215 SLCKKIEQ-----------CDYPPL-----PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HHhhhhhc-----------CCCCCC-----CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 11110000 000000 0123556789999999999999999999999998876
No 79
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.84 E-value=5e-21 Score=127.72 Aligned_cols=130 Identities=25% Similarity=0.413 Sum_probs=88.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcc--cccccccccccccccccCCCccccchhhHhHHHHHHHHHhc-CCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTR-KKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~-~~p~~~~~~ 77 (159)
||++.++.+||+|||+++......... ......++..|+|||.+.+..++.++|+||||++++++++| ..||.....
T Consensus 129 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~ 208 (262)
T cd05058 129 CMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS 208 (262)
T ss_pred EEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 578889999999999997653222111 11123456689999998888889999999999999999995 455543211
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
......... . ... ..+...+..+.+++..||+.+|++||++.++++.|+++..
T Consensus 209 --~~~~~~~~~---~------------~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 209 --FDITVYLLQ---G------------RRL--LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred --HHHHHHHhc---C------------CCC--CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 111111100 0 000 0011234578899999999999999999999999998764
No 80
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.84 E-value=2.2e-21 Score=129.57 Aligned_cols=137 Identities=18% Similarity=0.162 Sum_probs=93.3
Q ss_pred CccCCC-CceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
||+|.+ |.+||||||.|+....++... ..+.|..|+|||.+.+. .|+.+.||||.||++.||+.|++.|.+....
T Consensus 156 lLvD~~tg~LKicDFGSAK~L~~~epni---SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~ 232 (364)
T KOG0658|consen 156 LLVDPDTGVLKICDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV 232 (364)
T ss_pred EEEcCCCCeEEeccCCcceeeccCCCce---eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH
Confidence 467754 999999999999876554432 24578899999987766 7999999999999999999999999873222
Q ss_pred cccHHHHHHhhcCCccc----------chhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 79 EMSLRDWVNKSLSGELT----------QVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
..+...+...-.+..+ +...+.+...+.........++...+++.+++.++|.+|.++.|++
T Consensus 233 -dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 233 -DQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred -HHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 2222222111111111 1111222222222222335677899999999999999999999887
No 81
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.84 E-value=8.9e-21 Score=126.84 Aligned_cols=128 Identities=27% Similarity=0.453 Sum_probs=90.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++................++..|++||...+..++.++|+||||++++++++ |..||......
T Consensus 137 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~- 215 (266)
T cd05033 137 ILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ- 215 (266)
T ss_pred EEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-
Confidence 5788899999999999987642222111112234567999999888888899999999999999987 88887542211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.....+..... . +.+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 216 -~~~~~~~~~~~-----------~------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 216 -DVIKAVEDGYR-----------L------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -HHHHHHHcCCC-----------C------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11111111000 0 01123456789999999999999999999999999876
No 82
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.84 E-value=1.6e-21 Score=137.55 Aligned_cols=135 Identities=24% Similarity=0.331 Sum_probs=100.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~ 78 (159)
+|+|+++++||+|||+++.+-.++.+......+-..+|+|+|.+.-.+++.++|+|+||+++||+++ ...||.....+
T Consensus 668 cLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e 747 (807)
T KOG1094|consen 668 CLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE 747 (807)
T ss_pred eeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH
Confidence 5889999999999999998766777766666677889999999888899999999999999999964 67887654321
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
. .. .+...+++. .+...-...|..|+..+.++|.+||..|..+||+++++..-|++.
T Consensus 748 ~--vv--------en~~~~~~~--~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 748 Q--VV--------ENAGEFFRD--QGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred H--HH--------HhhhhhcCC--CCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1 10 111111110 001111233557888999999999999999999999999888764
No 83
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.84 E-value=2.7e-21 Score=130.95 Aligned_cols=131 Identities=22% Similarity=0.335 Sum_probs=103.3
Q ss_pred ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccccc
Q 035782 2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGEM 80 (159)
Q Consensus 2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~~ 80 (159)
+||+..+|||+|-.+++-.-+.+..+..........||++|.+....|+.++|+||||+++||+.+ |+.|+..+.+.++
T Consensus 428 vIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm 507 (563)
T KOG1024|consen 428 VIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM 507 (563)
T ss_pred eehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH
Confidence 578888999999999998766666555555556678999999999999999999999999999986 8899876543221
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
. .++ ++.++.-+|.+|+.+++.+|.-||..+|++||+++++..-|.+...++
T Consensus 508 ~--~yl-----------------kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 508 E--HYL-----------------KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred H--HHH-----------------hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 1 111 122233345689999999999999999999999999999998876554
No 84
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.84 E-value=3.7e-21 Score=136.93 Aligned_cols=144 Identities=15% Similarity=0.146 Sum_probs=89.2
Q ss_pred CccCCC-CceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
||++.+ +.+||+|||+++.+..... .....||+.|+|||++.+. .++.++|+||+||+++++++|.+||......
T Consensus 201 ILl~~~~~~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 277 (440)
T PTZ00036 201 LLIDPNTHTLKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV 277 (440)
T ss_pred EEEcCCCCceeeeccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 567755 4799999999987643222 2234678999999987654 6889999999999999999999999753221
Q ss_pred cccHHHHHHhhcCCcc----------cchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH--HHHHH
Q 035782 79 EMSLRDWVNKSLSGEL----------TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA--AKLKK 146 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll--~~l~~ 146 (159)
+ .....+........ ..+.-+.+.........+...+..+.+++.+||..||.+|||+.|++ ..+..
T Consensus 278 ~-~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 278 D-QLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred H-HHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 1 11111111000000 00000000000000111223456789999999999999999999998 44444
Q ss_pred HH
Q 035782 147 IK 148 (159)
Q Consensus 147 ~~ 148 (159)
+.
T Consensus 357 ~~ 358 (440)
T PTZ00036 357 LR 358 (440)
T ss_pred hh
Confidence 43
No 85
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.84 E-value=4.5e-21 Score=129.55 Aligned_cols=130 Identities=20% Similarity=0.267 Sum_probs=89.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++........ .....|+..|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus 133 ill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~- 208 (285)
T cd05631 133 ILLDDRGHIRISDLGLAVQIPEGET---VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV- 208 (285)
T ss_pred EEECCCCCEEEeeCCCcEEcCCCCe---ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-
Confidence 5788899999999999987532221 233568999999999988889999999999999999999999997532211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH--HHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA--KLKKIKE 149 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~--~l~~~~~ 149 (159)
.............. ..+......+.+++.+||+.||.+||+ ++++++ .+..+..
T Consensus 209 -~~~~~~~~~~~~~~--------------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 209 -KREEVDRRVKEDQE--------------EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred -hHHHHHHHhhcccc--------------cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 00001100000000 001123457888999999999999997 788885 3444433
No 86
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.84 E-value=7e-21 Score=129.63 Aligned_cols=140 Identities=16% Similarity=0.143 Sum_probs=85.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||++........ ......+++.|+|||++.+. .++.++|+||+|++++++++|..||.......
T Consensus 134 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 211 (303)
T cd07869 134 LLISDTGELKLADFGLARAKSVPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ 211 (303)
T ss_pred EEECCCCCEEECCCCcceeccCCCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence 5788999999999999876432221 22335678999999987654 57888999999999999999999997543211
Q ss_pred ccHHHHHHhhcCC---cccchhh-hhccc------cc---hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSG---ELTQVID-ANLAR------DE---QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~---~~~~~~~-~~~~~------~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............. .+..... +...+ .+ ............+.+++.+||+.||.+|||+.++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 212 DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 1111111100000 0000000 00000 00 000000112345778999999999999999999984
No 87
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.84 E-value=1.8e-21 Score=134.50 Aligned_cols=122 Identities=23% Similarity=0.239 Sum_probs=94.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|++.+++.+||+|||+|+.+.... .....++||+.|+.||.+.+.+|+.++|+||+||++|||.+-+++|.....
T Consensus 137 ifltk~~~VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--- 211 (426)
T KOG0589|consen 137 IFLTKDKKVKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--- 211 (426)
T ss_pred hhccccCceeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch---
Confidence 577888899999999999885433 233457899999999999999999999999999999999999999876322
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
..++.+..... ..+.+......+..++..|+..+|..||++.+++..
T Consensus 212 --------------~~Li~ki~~~~--~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 212 --------------SELILKINRGL--YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --------------HHHHHHHhhcc--CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 22222211111 111233566788999999999999999999999966
No 88
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.84 E-value=7.1e-21 Score=132.25 Aligned_cols=139 Identities=17% Similarity=0.135 Sum_probs=88.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++...... ......|++.|+|||++.+..++.++|+||+|++++++++|..||......+.
T Consensus 150 ill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 226 (355)
T cd07874 150 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226 (355)
T ss_pred EEECCCCCEEEeeCcccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 578899999999999997653221 22335688999999999888889999999999999999999999975321110
Q ss_pred cHHHHHHhhcC----------Ccccchhhhh----------c-ccc--chhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 81 SLRDWVNKSLS----------GELTQVIDAN----------L-ARD--EQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 81 ~~~~~~~~~~~----------~~~~~~~~~~----------~-~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
+...+..... ......+... . ... +............+.+++.+||+.||.+|||+
T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~ 305 (355)
T cd07874 227 -WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305 (355)
T ss_pred -HHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCH
Confidence 0000000000 0000000000 0 000 00000111224567899999999999999999
Q ss_pred HHHHHH
Q 035782 138 TDAAAK 143 (159)
Q Consensus 138 ~~ll~~ 143 (159)
.|+++.
T Consensus 306 ~ell~h 311 (355)
T cd07874 306 DEALQH 311 (355)
T ss_pred HHHhcC
Confidence 999963
No 89
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.84 E-value=6.4e-21 Score=132.89 Aligned_cols=137 Identities=16% Similarity=0.117 Sum_probs=88.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++...... ......+++.|+|||++.+..++.++|+||+|++++++++|+.||......+
T Consensus 157 Ill~~~~~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~- 232 (364)
T cd07875 157 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID- 232 (364)
T ss_pred EEECCCCcEEEEeCCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-
Confidence 678899999999999997653221 2233568899999999988889999999999999999999999997532211
Q ss_pred cHHHHHHhhcCCcccch-------hhhhccccc-----------------hhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782 81 SLRDWVNKSLSGELTQV-------IDANLARDE-----------------QSFFVKMDCLSSIMHLALDCCMESPDQRIY 136 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt 136 (159)
.+...+.. .......+ +.......+ ............+.+++.+|++.||.+|||
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t 311 (364)
T cd07875 233 QWNKVIEQ-LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311 (364)
T ss_pred HHHHHHHh-cCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCC
Confidence 01111100 00000000 000000000 000000112346789999999999999999
Q ss_pred HHHHHH
Q 035782 137 MTDAAA 142 (159)
Q Consensus 137 ~~~ll~ 142 (159)
+.++++
T Consensus 312 ~~e~L~ 317 (364)
T cd07875 312 VDEALQ 317 (364)
T ss_pred HHHHhc
Confidence 999985
No 90
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.84 E-value=1.2e-20 Score=131.06 Aligned_cols=125 Identities=19% Similarity=0.285 Sum_probs=84.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
||++.++.+||+|||+++....... ......|+..|+|||++.. ...+.++||||||++++++++|+.||...
T Consensus 199 Ill~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 276 (353)
T PLN00034 199 LLINSAKNVKIADFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVG 276 (353)
T ss_pred EEEcCCCCEEEcccccceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 6788999999999999987642211 1233568999999998743 22346899999999999999999998732
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
..++ +........... ....+......+.+++.+||+.||++|||+.|+++.
T Consensus 277 ~~~~--~~~~~~~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 277 RQGD--WASLMCAICMSQ--------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCcc--HHHHHHHHhccC--------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2111 111111000000 000112345678999999999999999999999863
No 91
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.84 E-value=3.6e-21 Score=128.36 Aligned_cols=126 Identities=30% Similarity=0.501 Sum_probs=89.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.+......... .....++..|++||+.....++.++|+||+|++++++++ |..||......
T Consensus 135 ilv~~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~- 211 (261)
T cd05148 135 ILVGEDLVCKVADFGLARLIKEDVYL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH- 211 (261)
T ss_pred EEEcCCceEEEccccchhhcCCcccc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-
Confidence 57888999999999999765332211 112335668999999887788889999999999999998 78888653211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.....+..... .+.+..++..+.+++.+||+.||++|||+.++++.|+++
T Consensus 212 -~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 212 -EVYDQITAGYR-----------------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -HHHHHHHhCCc-----------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 11111110000 011224556789999999999999999999999999864
No 92
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.84 E-value=9.3e-21 Score=128.13 Aligned_cols=127 Identities=24% Similarity=0.365 Sum_probs=88.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++.................+..|+|||+..+..++.++|+||||++++++++ |..||......
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~- 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE- 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 5778899999999999876543322222222334667999999888888999999999999999997 77787543211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
+......... ... .+...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 240 ----~~~~~~~~~~--------~~~------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 ----EVIYYVRDGN--------VLS------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----HHHHHHhcCC--------CCC------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1111111000 000 112345678999999999999999999999999863
No 93
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.84 E-value=8e-21 Score=132.18 Aligned_cols=138 Identities=16% Similarity=0.096 Sum_probs=87.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||+++...... ......||+.|+|||++.+..++.++|+||+|++++++++|..||......+
T Consensus 154 Il~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~- 229 (359)
T cd07876 154 IVVKSDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID- 229 (359)
T ss_pred EEECCCCCEEEecCCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 678899999999999997643221 1233468899999999988889999999999999999999999997542211
Q ss_pred cHHHHHHhhcCCc----------ccchhhhhcccc-------------chhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 81 SLRDWVNKSLSGE----------LTQVIDANLARD-------------EQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 81 ~~~~~~~~~~~~~----------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
.+........... ............ +............+.+++.+||..||.+|||+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 309 (359)
T cd07876 230 QWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISV 309 (359)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCH
Confidence 1111110000000 000000000000 00000011124568899999999999999999
Q ss_pred HHHHH
Q 035782 138 TDAAA 142 (159)
Q Consensus 138 ~~ll~ 142 (159)
.|++.
T Consensus 310 ~e~l~ 314 (359)
T cd07876 310 DEALR 314 (359)
T ss_pred HHHhc
Confidence 99986
No 94
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.84 E-value=1.5e-20 Score=127.66 Aligned_cols=129 Identities=25% Similarity=0.353 Sum_probs=90.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||++...... ........+..|++||+..+..++.++|+||||++++++++ |..||......
T Consensus 150 ill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~- 225 (297)
T cd05089 150 VLVGENLASKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA- 225 (297)
T ss_pred EEECCCCeEEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 57888999999999998643211 01111223456999999888788899999999999999997 98998653211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
........ .... ..+...+..+.+++.+||..+|.+||++.++++.|+++.+..
T Consensus 226 ----~~~~~~~~---------~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 226 ----ELYEKLPQ---------GYRM-----EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred ----HHHHHHhc---------CCCC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111000 0000 011234567889999999999999999999999999988755
No 95
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.84 E-value=9.2e-21 Score=126.41 Aligned_cols=126 Identities=22% Similarity=0.402 Sum_probs=89.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++......... ......++..|+|||+.....++.++|+||+|++++++++ |..||.......
T Consensus 134 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~ 212 (261)
T cd05072 134 VLVSESLMCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD 212 (261)
T ss_pred EEecCCCcEEECCCccceecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH
Confidence 57888999999999999876432211 1222335668999999888788889999999999999998 888986432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
....+.... . .+.....+..+.+++.+||..+|++||++.++.+.|++
T Consensus 213 --~~~~~~~~~----~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 213 --VMSALQRGY----R-------------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --HHHHHHcCC----C-------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 111111100 0 00111344578899999999999999999999999875
No 96
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=3.8e-21 Score=137.33 Aligned_cols=123 Identities=22% Similarity=0.270 Sum_probs=94.6
Q ss_pred CccCCCCceEEcccccceecCCCCCccccccccccccccccccc-----CCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG-----SEGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~-----~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
||+..+|.++|+|||++.... .....+..++|||+|||||+. +..+|..++||||||+++.+|..+.+|....
T Consensus 161 iL~TldGdirLADFGVSAKn~--~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel 238 (1187)
T KOG0579|consen 161 ILLTLDGDIRLADFGVSAKNK--STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL 238 (1187)
T ss_pred eEEEecCcEeeecccccccch--hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc
Confidence 678889999999999986642 223345668999999999964 5668999999999999999999999986543
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.+ +. ++-..-...++...+|......+.+++.+||..||..||++.++++
T Consensus 239 np--MR---------------VllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 239 NP--MR---------------VLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ch--HH---------------HHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 21 11 1112223345555566678888999999999999999999999984
No 97
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.84 E-value=8.4e-21 Score=126.30 Aligned_cols=123 Identities=27% Similarity=0.391 Sum_probs=87.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++....... ....++..|+|||+..+..++.++|+||+|++++++++ |..||......
T Consensus 133 il~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~- 206 (256)
T cd05082 133 VLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK- 206 (256)
T ss_pred EEEcCCCcEEecCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 578899999999999987643221 11234567999999888788899999999999999997 88887542211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.....+.... .. ..+..++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 207 -~~~~~~~~~~------------~~-----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 207 -DVVPRVEKGY------------KM-----DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -HHHHHHhcCC------------CC-----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 1111111100 00 01124566789999999999999999999999988763
No 98
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.84 E-value=1.3e-20 Score=130.41 Aligned_cols=132 Identities=26% Similarity=0.405 Sum_probs=91.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||++................++..|++||.+.+..++.++|+||||++++++++ |..||.......
T Consensus 210 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 289 (343)
T cd05103 210 ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 289 (343)
T ss_pred EEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH
Confidence 5788899999999999976533222222222335667999999888788899999999999999996 888876532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
.......... . .. .+....+.+.+++..||+.||++|||+.+|++.|+.+.+.
T Consensus 290 -~~~~~~~~~~----~-------~~------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 290 -EFCRRLKEGT----R-------MR------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred -HHHHHHhccC----C-------CC------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0111010000 0 00 0111234688999999999999999999999999998763
No 99
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.84 E-value=6.5e-21 Score=133.09 Aligned_cols=122 Identities=19% Similarity=0.310 Sum_probs=89.9
Q ss_pred CccCCCCceEEcccccceecCCCCCc---------c--cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS---------V--TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK 69 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~---------~--~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~ 69 (159)
||+|+++++||+|||.|+.+...... . ....++||-.|.+||++.....+..+|+|+|||++|.|+.|+
T Consensus 205 ILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~ 284 (604)
T KOG0592|consen 205 ILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQ 284 (604)
T ss_pred eeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCC
Confidence 79999999999999999987532211 1 124578999999999999999999999999999999999999
Q ss_pred CCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 70 KPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 70 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+||.... +-..+.......+ .. +..-++...+|+.+.|..||++|+|+.+|.+
T Consensus 285 PPFra~N-eyliFqkI~~l~y----------~f---------p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 285 PPFRAAN-EYLIFQKIQALDY----------EF---------PEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred CCCcccc-HHHHHHHHHHhcc----------cC---------CCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 9996531 1111111111110 00 1123457888999999999999999988764
No 100
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.84 E-value=1.2e-20 Score=130.02 Aligned_cols=136 Identities=19% Similarity=0.239 Sum_probs=88.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++....... .....|++.|+|||++.+..++.++|+||+|++++++++|+.||......+
T Consensus 135 il~~~~~~~kl~Dfg~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~- 209 (331)
T cd06649 135 ILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE- 209 (331)
T ss_pred EEEcCCCcEEEccCcccccccccc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 578889999999999987653221 223468999999999988888999999999999999999999986432211
Q ss_pred cHHHHHHhhcCCc----c---------------------------cchhhhhccccchhhhhchHHHHHHHHHHhhhcCC
Q 035782 81 SLRDWVNKSLSGE----L---------------------------TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCME 129 (159)
Q Consensus 81 ~~~~~~~~~~~~~----~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~ 129 (159)
+...+....... . ..+.+......... .........+.+++.+||+.
T Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~ 287 (331)
T cd06649 210 -LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPK-LPNGVFTPDFQEFVNKCLIK 287 (331)
T ss_pred -HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcC-CCCccccHHHHHHHHHHccC
Confidence 111111000000 0 00000000000000 00112346789999999999
Q ss_pred CCCCCCcHHHHHHH
Q 035782 130 SPDQRIYMTDAAAK 143 (159)
Q Consensus 130 ~p~~Rpt~~~ll~~ 143 (159)
||++|||+.++++.
T Consensus 288 ~P~~Rpt~~ell~h 301 (331)
T cd06649 288 NPAERADLKMLMNH 301 (331)
T ss_pred CcccCCCHHHHhcC
Confidence 99999999999854
No 101
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.84 E-value=1.3e-21 Score=137.28 Aligned_cols=133 Identities=25% Similarity=0.373 Sum_probs=95.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
+|++.++.+||+|||+++.-. ..........-...|+|||.+...-|+.++||||||+++||+++ |..||.+....
T Consensus 293 cL~~~~~~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~- 369 (474)
T KOG0194|consen 293 CLYSKKGVVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY- 369 (474)
T ss_pred heecCCCeEEeCccccccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-
Confidence 477888889999999987642 11111111224568999999999999999999999999999998 77888664321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD 153 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~ 153 (159)
....++ .....+.+.+...+..+..++..||..+|++||++.++.+.|+.+......
T Consensus 370 -~v~~kI----------------~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 370 -EVKAKI----------------VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred -HHHHHH----------------HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 111111 011111112225567788899999999999999999999999999887664
No 102
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.84 E-value=2.1e-20 Score=124.92 Aligned_cols=130 Identities=19% Similarity=0.250 Sum_probs=91.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++......... .....+++.|.|||++.+..++.++|+||+|++++++++|..||.... .
T Consensus 137 il~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~ 211 (267)
T cd08224 137 VFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---M 211 (267)
T ss_pred EEECCCCcEEEeccceeeeccCCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---c
Confidence 57888999999999998765432211 122457888999999888888899999999999999999999985432 1
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
.............. .+.+ ....+..+.+++.+||+.+|++|||+.+|++.|+++.
T Consensus 212 ~~~~~~~~~~~~~~--------~~~~-----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 212 NLYSLCKKIEKCDY--------PPLP-----ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cHHHHHhhhhcCCC--------CCCC-----hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 11111111100000 0000 0134557889999999999999999999999998764
No 103
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.84 E-value=1.2e-20 Score=125.62 Aligned_cols=126 Identities=31% Similarity=0.469 Sum_probs=90.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.+................++..|+|||......++.++|+||+|++++++++ |..||.....
T Consensus 136 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-- 213 (262)
T cd00192 136 CLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-- 213 (262)
T ss_pred EEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 5788889999999999987654332222333456788999999888788899999999999999998 5888865421
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
.......... .....+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 214 ---~~~~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 214 ---EEVLEYLRKG--------------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---HHHHHHHHcC--------------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111111100 000112244678999999999999999999999998763
No 104
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.83 E-value=1.4e-20 Score=132.36 Aligned_cols=130 Identities=21% Similarity=0.344 Sum_probs=91.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++...............+++.|++||.+.+..++.++|+||||++++++++ |..||......+
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 5778889999999999986533222112223346788999999888788899999999999999997 888876432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
. ....+.. .. .. ..+...+..+.+++.+||+.+|.+||++.+|++.|+++.
T Consensus 350 ~-~~~~~~~----~~--------~~-----~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 Q-FYNAIKR----GY--------RM-----AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred H-HHHHHHc----CC--------CC-----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1 0000100 00 00 011234567899999999999999999999999998864
No 105
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.83 E-value=2.3e-20 Score=128.75 Aligned_cols=132 Identities=23% Similarity=0.376 Sum_probs=92.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...............++..|+|||++.+..++.++|+||||++++++++ |..||......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~- 243 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE- 243 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 5788899999999999987643222211222234567999999988888899999999999999998 77887543211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
.......... . ...+..++..+.+++.+||+.+|.+|||+.+++..|+++...-
T Consensus 244 ----~~~~~~~~~~---------~-----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 244 ----ELFKLLKEGH---------R-----MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred ----HHHHHHHcCC---------C-----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1111100000 0 0011234557889999999999999999999999999988543
No 106
>PTZ00284 protein kinase; Provisional
Probab=99.83 E-value=1.5e-20 Score=134.91 Aligned_cols=128 Identities=16% Similarity=0.101 Sum_probs=80.4
Q ss_pred ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHH
Q 035782 8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVN 87 (159)
Q Consensus 8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 87 (159)
.+||+|||.+..... ..+..+||+.|+|||++.+..++.++||||+||++|++++|+.||...... .....+.
T Consensus 286 ~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--~~~~~i~ 358 (467)
T PTZ00284 286 RVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL--EHLHLME 358 (467)
T ss_pred eEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHH
Confidence 599999998754321 123357899999999999888999999999999999999999999653221 1111111
Q ss_pred hhcC------------Ccccchhhhh--ccc--cch-------hh-hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 88 KSLS------------GELTQVIDAN--LAR--DEQ-------SF-FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 88 ~~~~------------~~~~~~~~~~--~~~--~~~-------~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... .....+.... +.. .+. .. .........+.+++.+||+.||.+|||+.|+++
T Consensus 359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 1000 0000000000 000 000 00 000012345789999999999999999999985
No 107
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.83 E-value=4e-21 Score=124.85 Aligned_cols=123 Identities=24% Similarity=0.260 Sum_probs=88.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC------CCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS------EGIVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~------~~~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
||++++..+||+|||+++.+..++. ....||||+|+|||.+. ..+|+..+|.|++|+++|.++.|.+||-.
T Consensus 154 ILlddn~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH 230 (411)
T KOG0599|consen 154 ILLDDNMNIKISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH 230 (411)
T ss_pred eeeccccceEEeccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH
Confidence 7899999999999999998865443 34578999999999753 23688899999999999999999999843
Q ss_pred cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
-.- +-+...+.... - .-..+...+......+|+.+|++.||.+|.|++|+|+
T Consensus 231 RkQ--mlMLR~ImeGk----y----------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 231 RKQ--MLMLRMIMEGK----Y----------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHH--HHHHHHHHhcc----c----------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 110 00000010000 0 0011122366778899999999999999999999984
No 108
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.83 E-value=5.9e-21 Score=122.02 Aligned_cols=132 Identities=20% Similarity=0.237 Sum_probs=91.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcc-------cccccccccccccccccCC---CccccchhhHhHHHHHHHHHhcCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV-------TQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTRKK 70 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~gt~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~~~~ 70 (159)
||+.+++.+++.|||.+....-..... -......|..|.|||.+.- .-.+.++||||+||++|.++.|..
T Consensus 160 ILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~s 239 (302)
T KOG2345|consen 160 ILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGES 239 (302)
T ss_pred eEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCC
Confidence 577788999999999987653211111 1223457889999997543 346789999999999999999999
Q ss_pred CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
||+..+....++. -.+..+.+. .+ ...-.++.+.+++..|++.||.+||++.+++..++.+.
T Consensus 240 Pfe~~~~~GgSla-----------LAv~n~q~s-~P----~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 240 PFERIYQQGGSLA-----------LAVQNAQIS-IP----NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cchHHhhcCCeEE-----------Eeeeccccc-cC----CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 9986543221110 011111111 11 11135678999999999999999999999999988763
No 109
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.83 E-value=2.2e-20 Score=124.59 Aligned_cols=126 Identities=26% Similarity=0.419 Sum_probs=88.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ........+..|++||+..+..++.++|+||||++++++++ |..||......
T Consensus 134 il~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 211 (261)
T cd05068 134 VLVGENNICKVADFGLARVIKEDIY-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA- 211 (261)
T ss_pred EEEcCCCCEEECCcceEEEccCCcc-cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 5788899999999999987642211 11111223457999999888888999999999999999998 88888643211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
.....+.... . .+.+...+..+.+++.+||+.+|.+||++.++++.|++
T Consensus 212 -~~~~~~~~~~----~-------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 212 -EVLQQVDQGY----R-------------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -HHHHHHHcCC----C-------------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1111110000 0 00112345678999999999999999999999999875
No 110
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.83 E-value=7.8e-21 Score=129.00 Aligned_cols=133 Identities=24% Similarity=0.333 Sum_probs=88.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~ 78 (159)
|+++.++.++|+|||++..+.........+...++..|++||......++.++|+||||++++++++ +..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 5788899999999999976543222222222344667999998777788999999999999999997 66777543221
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
.. ............... . .+.+..++..+.+++..||+.||.+||++.+|++.|+
T Consensus 241 ~~--~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 QV--IENTGEFFRDQGRQV----Y------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HH--HHHHHHHHhhccccc----c------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11 000000000000000 0 0111234567899999999999999999999999886
No 111
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.83 E-value=1e-20 Score=125.92 Aligned_cols=127 Identities=24% Similarity=0.381 Sum_probs=89.2
Q ss_pred CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
|+++.++.+||+|||++......... .......++..|++||+..+..++.++|+||+|++++++++ |..||......
T Consensus 128 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 207 (257)
T cd05040 128 ILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS 207 (257)
T ss_pred EEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 57888899999999999876432221 11122346778999999888888899999999999999998 99998543211
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
+ ....+... . .....+...+..+.+++.+||+.+|++||++.+++..|.
T Consensus 208 ~--~~~~~~~~-~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 208 Q--ILKKIDKE-G---------------ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred H--HHHHHHhc-C---------------CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 1 11111100 0 000011234567889999999999999999999998874
No 112
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.83 E-value=2.5e-21 Score=132.95 Aligned_cols=120 Identities=20% Similarity=0.212 Sum_probs=86.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 126 Ill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-- 201 (323)
T cd05571 126 LMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-- 201 (323)
T ss_pred EEECCCCCEEEeeCCCCcccccCCC--cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--
Confidence 6888999999999999875422111 123356899999999998888999999999999999999999998642211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
........... ..+......+.+++.+||+.||.+|| ++.++++
T Consensus 202 ---~~~~~~~~~~~---------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 202 ---KLFELILMEEI---------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred ---HHHHHHHcCCC---------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 11111000000 00113455688999999999999999 7888874
No 113
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.83 E-value=2.3e-20 Score=125.64 Aligned_cols=132 Identities=23% Similarity=0.337 Sum_probs=92.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...............++..|++||......++.++|+||||++++++++ |..||......+
T Consensus 140 il~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 219 (279)
T cd05057 140 VLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE 219 (279)
T ss_pred EEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence 5778889999999999987643322222222224567999998887788899999999999999998 999986532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
....+.... ..+.+..+...+..++.+||..+|++||++.++++.|.++.++.
T Consensus 220 --~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 220 --IPDLLEKGE-----------------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred --HHHHHhCCC-----------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 111111100 00111123456888999999999999999999999999987653
No 114
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.83 E-value=2.1e-20 Score=125.11 Aligned_cols=127 Identities=20% Similarity=0.303 Sum_probs=89.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+|++|||.+......... ......++..|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus 138 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~ 216 (266)
T cd05064 138 VLVNSDLVCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD 216 (266)
T ss_pred EEEcCCCcEEECCCcccccccccchh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence 57888999999999987654221111 1112234678999999888889999999999999999775 999986532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
....+.... ..+.+..++..+.+++..||+.+|++||++.++++.|+++
T Consensus 217 --~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 217 --VIKAVEDGF-----------------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --HHHHHHCCC-----------------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 111111000 0011234566789999999999999999999999998775
No 115
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.83 E-value=2.4e-20 Score=123.83 Aligned_cols=126 Identities=27% Similarity=0.392 Sum_probs=85.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++................++..|+|||.+.+..++.++|+||+|++++++++ |..||......
T Consensus 125 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~- 203 (252)
T cd05084 125 CLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ- 203 (252)
T ss_pred EEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-
Confidence 5778889999999999876432211111111123456999999888888899999999999999997 88887542211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
........... . ..+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 204 -~~~~~~~~~~~------------~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 204 -QTREAIEQGVR------------L-----PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred -HHHHHHHcCCC------------C-----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 11111110000 0 011234567899999999999999999999998875
No 116
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.83 E-value=3.1e-20 Score=126.00 Aligned_cols=133 Identities=23% Similarity=0.314 Sum_probs=87.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh--cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--~~~p~~~~~~~ 78 (159)
|+++.++.+||+|||++............+...++..|+|||+..+..++.++|+||||++++++++ +..||......
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 5788889999999999976543322222233345678999999888888999999999999999987 55666542211
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
. ................ ... .+...+..+.+++.+||..||++|||+.+|++.|+
T Consensus 240 ~--~~~~~~~~~~~~~~~~----~~~------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 Q--VIENTGEFFRNQGRQI----YLS------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred H--HHHHHHHhhhhccccc----cCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1 1110000000000000 000 01124567999999999999999999999998886
No 117
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.83 E-value=2.3e-20 Score=126.26 Aligned_cols=129 Identities=21% Similarity=0.372 Sum_probs=90.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...............++..|++||.+.+..++.++|+||||++++++++ |..||......+
T Consensus 150 ili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~ 229 (288)
T cd05061 150 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 229 (288)
T ss_pred EEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 5788899999999999886543222222222345667999999888788899999999999999998 677875432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
....+ ..... .. .+...+..+.+++.+||+.||++|||+.++++.|++..
T Consensus 230 --~~~~~---~~~~~--------~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 230 --VLKFV---MDGGY--------LD------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred --HHHHH---HcCCC--------CC------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 11111 00000 00 01133567999999999999999999999998888754
No 118
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.83 E-value=2.5e-20 Score=124.81 Aligned_cols=126 Identities=25% Similarity=0.415 Sum_probs=87.4
Q ss_pred CccCCCC-----ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcc
Q 035782 1 ILLDEDM-----VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDE 74 (159)
Q Consensus 1 ili~~~~-----~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~ 74 (159)
|+++.++ .+|++|||++................++..|++||++.+..++.++|+||||++++++++ |..||..
T Consensus 137 il~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~ 216 (269)
T cd05044 137 CLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPA 216 (269)
T ss_pred EEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcc
Confidence 4556555 899999999976543322222222345678999999988888999999999999999997 8888864
Q ss_pred cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
... ......+.. .. ....+...+..+.+++.+||..+|++||++.++++.|+
T Consensus 217 ~~~--~~~~~~~~~---~~--------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 217 LNN--QEVLQHVTA---GG--------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cCH--HHHHHHHhc---CC--------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 321 111111100 00 00011245667899999999999999999999999886
No 119
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.83 E-value=1.5e-20 Score=126.04 Aligned_cols=126 Identities=29% Similarity=0.400 Sum_probs=87.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++..... .........+..|+|||+..+..++.++|+||||++++++++ |..||.....
T Consensus 143 ili~~~~~~kl~dfgl~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-- 217 (270)
T cd05047 143 ILVGENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-- 217 (270)
T ss_pred EEEcCCCeEEECCCCCccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--
Confidence 5788899999999999853211 111111223557999999888788899999999999999996 8899854321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
.......... ... ..+...+..+.+++.+||+.+|.+|||+.++++.|+++.
T Consensus 218 ---~~~~~~~~~~---------~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 218 ---AELYEKLPQG---------YRL-----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ---HHHHHHHhCC---------CCC-----CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1111111000 000 001123456889999999999999999999999999875
No 120
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.83 E-value=2.2e-20 Score=124.49 Aligned_cols=128 Identities=25% Similarity=0.416 Sum_probs=89.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
|+++.++.+||+|||++.......... ......++..|+|||.+....++.++|+||||++++++++ |..||......
T Consensus 126 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 205 (257)
T cd05115 126 VLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP 205 (257)
T ss_pred EEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence 577888999999999997653322211 1111223567999999887788899999999999999996 89998654221
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
+ ....+.... .. ..+..+++.+.+++.+||..+|++||++.++.+.|+++
T Consensus 206 ~--~~~~~~~~~------------~~-----~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 206 E--VMSFIEQGK------------RL-----DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred H--HHHHHHCCC------------CC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1 111111110 00 01123467888999999999999999999999998875
No 121
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.83 E-value=2.3e-20 Score=131.26 Aligned_cols=143 Identities=19% Similarity=0.114 Sum_probs=90.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE- 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~- 79 (159)
||++.++.+||+|||+++...............||+.|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus 216 ill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~ 295 (392)
T PHA03207 216 IFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSS 295 (392)
T ss_pred EEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCc
Confidence 5788999999999999977643332222234568999999999988889999999999999999999999986543221
Q ss_pred -ccHHHHHHhhcCC--c-----ccchhh---hhc-cccc----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 80 -MSLRDWVNKSLSG--E-----LTQVID---ANL-ARDE----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 80 -~~~~~~~~~~~~~--~-----~~~~~~---~~~-~~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
..+...+...... . ...+.. ... ...+ ............+..++.+||..||.+|||+.+++..
T Consensus 296 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 296 SSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111111110000 0 000000 000 0000 0000011234567789999999999999999999853
No 122
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.83 E-value=1.3e-20 Score=126.32 Aligned_cols=122 Identities=19% Similarity=0.218 Sum_probs=83.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.++.+||+|||++....... .......|+..|+|||++. ...++.++|+||+|++++++++|..||...
T Consensus 142 ili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~ 219 (272)
T cd06637 142 VLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 219 (272)
T ss_pred EEECCCCCEEEccCCCceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 578889999999999987653221 1223356888999999875 235778899999999999999999998543
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... .... ........ ......+..+.+++.+||..||.+|||+.++++
T Consensus 220 ~~~~----~~~~-~~~~~~~~-------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 220 HPMR----ALFL-IPRNPAPR-------------LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CHHH----HHHH-HhcCCCCC-------------CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 2111 0000 00000000 001133456889999999999999999999875
No 123
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.83 E-value=4.4e-20 Score=123.75 Aligned_cols=130 Identities=22% Similarity=0.348 Sum_probs=92.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++........ ..+...++..|+|||......++.++|+||+|++++++++ |..||.......
T Consensus 138 ili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~ 216 (270)
T cd05056 138 VLVSSPDCVKLGDFGLSRYLEDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND 216 (270)
T ss_pred EEEecCCCeEEccCceeeecccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 57788899999999999876433211 1122234567999999887788899999999999999886 999986532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
....+.... ....+..++..+.+++.+||..+|++|||+.+++..|+++..+
T Consensus 217 --~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 217 --VIGRIENGE-----------------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --HHHHHHcCC-----------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 111111000 0001124456789999999999999999999999999998764
No 124
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.83 E-value=2.2e-20 Score=126.24 Aligned_cols=138 Identities=20% Similarity=0.205 Sum_probs=88.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||+++...... ......|+..|+|||++.+..++.++|+||+|++++++++|..+|......+
T Consensus 139 ili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~- 214 (288)
T cd07863 139 ILVTSGGQVKLADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD- 214 (288)
T ss_pred EEECCCCCEEECccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-
Confidence 578899999999999998764222 1223457889999999988888999999999999999999999986432211
Q ss_pred cHHHHHHhh---cCCcccchh---hhhccccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKS---LSGELTQVI---DANLARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~---~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......... ....+.... ......... ...........+.+++.+|++.||.+|||+.+++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 215 QLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 111111100 000000000 000000000 00111234566889999999999999999999874
No 125
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.83 E-value=2.5e-20 Score=125.00 Aligned_cols=128 Identities=24% Similarity=0.392 Sum_probs=89.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...............+++.|++||...+..++.++|+||+|++++++++ |..||.....
T Consensus 144 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-- 221 (273)
T cd05074 144 CMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-- 221 (273)
T ss_pred EEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--
Confidence 5778899999999999886543222211222335567999999888788889999999999999998 7888764321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.....++.... . . ..+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 222 ~~~~~~~~~~~--~---~------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 222 SEIYNYLIKGN--R---L------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHcCC--c---C------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111111100 0 0 00113456789999999999999999999999999876
No 126
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.83 E-value=3e-20 Score=125.74 Aligned_cols=137 Identities=16% Similarity=0.135 Sum_probs=86.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++....... ......+++.|+|||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus 134 il~~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~ 211 (288)
T cd07871 134 LLINEKGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE 211 (288)
T ss_pred EEECCCCCEEECcCcceeeccCCCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5788999999999999976532221 1233457889999998765 467889999999999999999999997533211
Q ss_pred ccHHHHHHhhcC----Ccccch---------hhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLS----GELTQV---------IDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~----~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
. ...+..... ..+..+ ..+.....+. ............+++.+|++.||.+|||+.|+++
T Consensus 212 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 212 E--LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPL-INHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred H--HHHHHHHhCCCChHHhhccccchhhhccccCccCCCch-HHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1 111111010 001110 0000000000 0001123456789999999999999999999974
No 127
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.83 E-value=3e-20 Score=123.88 Aligned_cols=126 Identities=27% Similarity=0.460 Sum_probs=88.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||++..+...... ......++..|+|||...+..++.++|+||||++++++++ |..||......
T Consensus 133 ili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~- 210 (260)
T cd05070 133 ILVGDGLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR- 210 (260)
T ss_pred EEEeCCceEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 57788899999999999876432221 1122235567999999887788899999999999999998 88888643211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
.....+..... .+.+...+..+.+++.+||..+|++|||+.++...|++
T Consensus 211 -~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 211 -EVLEQVERGYR-----------------MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -HHHHHHHcCCC-----------------CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11111110000 01112445679999999999999999999999988864
No 128
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.83 E-value=1.6e-20 Score=124.52 Aligned_cols=126 Identities=29% Similarity=0.450 Sum_probs=87.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++................++..|++||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus 124 ili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~ 203 (251)
T cd05041 124 CLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ 203 (251)
T ss_pred EEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH
Confidence 5788899999999999876532211111111223556999999888788899999999999999998 778875432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
....+.... . ...+...+..+.+++.+||..+|.+|||+.|+++.|+
T Consensus 204 --~~~~~~~~~------------~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 204 --TRERIESGY------------R-----MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred --HHHHHhcCC------------C-----CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 111111000 0 0011234567999999999999999999999999886
No 129
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.83 E-value=3.6e-20 Score=123.98 Aligned_cols=128 Identities=27% Similarity=0.451 Sum_probs=89.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccc-cccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQ-TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~-~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
|+++.++.+||+|||++............ .....+..|++||+..+..++.++|+||+|++++++++ |..||......
T Consensus 138 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~ 217 (268)
T cd05063 138 ILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH 217 (268)
T ss_pred EEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH
Confidence 57788999999999999766432221111 11223457999999887788899999999999999987 99998543211
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.....+.. . . ..+.+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 218 --~~~~~i~~---~--------~------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 218 --EVMKAIND---G--------F------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --HHHHHHhc---C--------C------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11111110 0 0 0001123456789999999999999999999999999876
No 130
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.83 E-value=4.1e-21 Score=135.84 Aligned_cols=119 Identities=18% Similarity=0.283 Sum_probs=87.3
Q ss_pred CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+|+ .-|.|||+|+|+|...+.. +...++|||.|||||.+- ..|+..+||||||+++.||+++..||..+....
T Consensus 176 IFinG~~G~VKIGDLGLAtl~r~s----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 176 IFVNGNLGEVKIGDLGLATLLRKS----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred EEEcCCcCceeecchhHHHHhhcc----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 3455 4489999999999887422 223378999999999886 689999999999999999999999987765433
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..+...+....+..+..+ ..+.+.+++.+|+.. .++|+|+.|+|+
T Consensus 251 QIYKKV~SGiKP~sl~kV-----------------~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKV-----------------KDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHHHHcCCCHHHhhcc-----------------CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 333322221111111111 134688999999999 999999999985
No 131
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.83 E-value=1.2e-20 Score=127.21 Aligned_cols=123 Identities=24% Similarity=0.228 Sum_probs=83.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.++.+||+|||++....... .......++..|++||++. +..++.++|+||+|++++++++|..||...
T Consensus 134 ili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 211 (282)
T cd06643 134 ILFTLDGDIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL 211 (282)
T ss_pred EEEccCCCEEEccccccccccccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence 577889999999999987653211 1223345788999999874 334677899999999999999999998653
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..... ... ..... ......+...+..+.+++.+||+.||++||++.++++
T Consensus 212 ~~~~~-~~~-~~~~~---------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 212 NPMRV-LLK-IAKSE---------------PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred CHHHH-HHH-HhhcC---------------CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 21110 000 00000 0000111234567899999999999999999999874
No 132
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.82 E-value=3.6e-20 Score=123.25 Aligned_cols=124 Identities=22% Similarity=0.348 Sum_probs=85.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.++........ ......++..|+|||+..+..++.++|+||||++++++++ |..||.....
T Consensus 131 i~i~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~-- 207 (256)
T cd05114 131 CLVSSTGVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN-- 207 (256)
T ss_pred EEEcCCCeEEECCCCCccccCCCcee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 46788899999999998765322211 1122234567999999888888899999999999999999 8888854321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
......+..... .. .+...+..+.+++.+||..+|++||++.++++.|
T Consensus 208 ~~~~~~i~~~~~-----------~~------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 208 YEVVEMISRGFR-----------LY------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHHHHCCCC-----------CC------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 111111111000 00 0112235689999999999999999999999876
No 133
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.82 E-value=4e-20 Score=123.54 Aligned_cols=127 Identities=28% Similarity=0.455 Sum_probs=89.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.++.+...... ......++..|++||+..+..++.++|+||+|++++++++ |..||.......
T Consensus 133 ill~~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~ 211 (262)
T cd05071 133 ILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 211 (262)
T ss_pred EEEcCCCcEEeccCCceeeccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH
Confidence 57788899999999999876433221 1122345667999999887788999999999999999999 777875432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
........ .. .+.+...+..+.+++.+||+.||++||++.++++.|+..
T Consensus 212 -----~~~~~~~~-~~-------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 212 -----VLDQVERG-YR-------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -----HHHHHhcC-CC-------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 11100000 00 001124556789999999999999999999999998764
No 134
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.82 E-value=8.8e-21 Score=130.25 Aligned_cols=120 Identities=23% Similarity=0.259 Sum_probs=85.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++....... ......|++.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 131 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-- 206 (323)
T cd05584 131 ILLDAQGHVKLTDFGLCKESIHEGT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-- 206 (323)
T ss_pred eEECCCCCEEEeeCcCCeecccCCC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--
Confidence 6788999999999999875432221 122346899999999998888889999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
.......... . ..+......+.+++.+||+.||++|| ++.+++.
T Consensus 207 ---~~~~~~~~~~--------~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 207 ---KTIDKILKGK--------L-------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ---HHHHHHHcCC--------C-------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1111111000 0 01113345688999999999999999 7888775
No 135
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.82 E-value=2.6e-20 Score=124.06 Aligned_cols=125 Identities=22% Similarity=0.330 Sum_probs=86.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.++....... .......++..|++||...+..++.++|+||||++++++++ |..||.......
T Consensus 131 ili~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~ 209 (256)
T cd05113 131 CLVDDQGCVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE 209 (256)
T ss_pred EEEcCCCCEEECCCccceecCCCce-eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence 5778889999999999876533221 11112235567999999887788899999999999999998 888876432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
....+...... . .+...+..+.+++..||+.+|.+||++.++++.|+
T Consensus 210 --~~~~~~~~~~~-----------~------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 210 --TVEKVSQGLRL-----------Y------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --HHHHHhcCCCC-----------C------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11111110000 0 01123467899999999999999999999998763
No 136
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.82 E-value=2.4e-20 Score=125.00 Aligned_cols=130 Identities=20% Similarity=0.283 Sum_probs=83.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-------ccccchhhHhHHHHHHHHHh-cCCCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-------IVSTKCDVYSYGVLLMETFT-RKKPT 72 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-------~~~~~~dv~s~g~~~~~~~~-~~~p~ 72 (159)
|+++.++.+||+|||++................++..|+|||++... .++.++|+||||++++++++ |..||
T Consensus 131 il~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~ 210 (269)
T cd05087 131 CLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPY 210 (269)
T ss_pred EEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCC
Confidence 56788899999999998754332222222334567789999987532 34678999999999999996 99998
Q ss_pred cccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 73 DEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
........ .... +.........+.+. ......+.+++..|| .+|++|||+.+|++.|.
T Consensus 211 ~~~~~~~~--~~~~---~~~~~~~~~~~~~~---------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 211 RHLSDEQV--LTYT---VREQQLKLPKPRLK---------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCChHHH--HHHH---hhcccCCCCCCccC---------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 65332211 0000 10100111111111 012345777999999 68999999999998774
No 137
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.82 E-value=3.6e-21 Score=131.58 Aligned_cols=119 Identities=24% Similarity=0.244 Sum_probs=84.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++...... .......||+.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus 124 ili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--- 198 (312)
T cd05585 124 ILLDYQGHIALCDFGLCKLNMKDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--- 198 (312)
T ss_pred eEECCCCcEEEEECcccccCccCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH---
Confidence 678899999999999987542221 122335689999999999888899999999999999999999999864321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc---HHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY---MTDAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt---~~~ll 141 (159)
........... . ..+......+.+++.+||..||.+||+ +.+++
T Consensus 199 --~~~~~~~~~~~--------~-------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 199 --NEMYRKILQEP--------L-------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred --HHHHHHHHcCC--------C-------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 11111111100 0 011234457889999999999999975 56665
No 138
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.82 E-value=3.1e-20 Score=123.34 Aligned_cols=138 Identities=21% Similarity=0.184 Sum_probs=92.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
+|+.+.|.+||+|||+|+.+++. ....+..+-|.+|+|||.+.+. .|+.+.|+||+||++.|++.+.+.|.+.. +
T Consensus 208 LLm~~~G~lKiaDFGLAR~ygsp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s--E 283 (419)
T KOG0663|consen 208 LLLSHKGILKIADFGLAREYGSP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS--E 283 (419)
T ss_pred eeeccCCcEEecccchhhhhcCC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc--h
Confidence 57889999999999999998644 2334556679999999998877 58999999999999999999999887632 2
Q ss_pred ccHHHHHHhhcC----Ccccchhh-hh-----ccccch--hhhhchH--HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLS----GELTQVID-AN-----LARDEQ--SFFVKMD--CLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~----~~~~~~~~-~~-----~~~~~~--~~~~~~~--~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......+.+... ..|..+-. +. ....++ .+..... .....++++...+.+||.+|.|++|.|+
T Consensus 284 ~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 284 IDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred HHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 222222222211 11111111 00 001111 0001111 2367889999999999999999999874
No 139
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.82 E-value=1.9e-20 Score=129.07 Aligned_cols=70 Identities=29% Similarity=0.374 Sum_probs=58.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
||++.++.+||+|||++....... .....|+..|+|||++.+..++.++|+||+|++++++++|..||..
T Consensus 135 ili~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 135 ILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred EEEcCCCCEEEeeCCcchhhhhhc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 578889999999999987653211 1234588899999999888888999999999999999999999864
No 140
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.82 E-value=8.4e-20 Score=125.02 Aligned_cols=71 Identities=18% Similarity=0.233 Sum_probs=55.6
Q ss_pred CCCCceEEcccccceecCCCCC-cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 4 DEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 4 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
+.++.+||+|||+++.+..... ........||+.|+|||++.+. .++.++|+||+|++++++++|..||..
T Consensus 146 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 146 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 4567899999999987643221 1122345689999999988764 578899999999999999999999864
No 141
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.82 E-value=6.3e-20 Score=122.39 Aligned_cols=126 Identities=27% Similarity=0.440 Sum_probs=89.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||++......... ......++..|++||+..+..++.++|+||+|++++++++ |..||.......
T Consensus 133 ill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 211 (260)
T cd05069 133 ILVGDNLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE 211 (260)
T ss_pred EEEcCCCeEEECCCccceEccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 57888999999999999776432211 1122335677999998887788899999999999999998 888886532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
....+...... +.+...+..+.+++.+||..||.+||++.++++.|++
T Consensus 212 --~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 212 --VLEQVERGYRM-----------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --HHHHHHcCCCC-----------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11111110000 0112345678999999999999999999999998875
No 142
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.82 E-value=1.3e-20 Score=129.54 Aligned_cols=120 Identities=18% Similarity=0.206 Sum_probs=84.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++....... .......|++.|+|||.+.+..++.++|+||+|++++++++|..||......
T Consensus 132 ill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-- 207 (324)
T cd05589 132 LLLDTEGFVKIADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-- 207 (324)
T ss_pred eEECCCCcEEeCcccCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--
Confidence 678999999999999987532211 1223456899999999998888899999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
.......... . ..+...+..+.+++.+||+.||++|| ++.++++
T Consensus 208 ---~~~~~i~~~~--------~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 208 ---EVFDSIVNDE--------V-------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ---HHHHHHHhCC--------C-------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 1111100000 0 00113345678899999999999999 5666664
No 143
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.82 E-value=4e-20 Score=129.89 Aligned_cols=141 Identities=18% Similarity=0.106 Sum_probs=87.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc--c
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI--G 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~--~ 78 (159)
||++.++.+||+|||+++...... ........||+.|+|||++.+..++.++|+||+|++++++++|..||-.... +
T Consensus 213 Ill~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~ 291 (391)
T PHA03212 213 IFINHPGDVCLGDFGAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG 291 (391)
T ss_pred EEEcCCCCEEEEeCCccccccccc-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc
Confidence 578889999999999997542211 1122335689999999999888899999999999999999999977643211 0
Q ss_pred c----ccHHHHHHhhcC--Cc----ccchhhh-------hccccchhh---hhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 79 E----MSLRDWVNKSLS--GE----LTQVIDA-------NLARDEQSF---FVKMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 79 ~----~~~~~~~~~~~~--~~----~~~~~~~-------~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
. ......+..... .. ....++. .....+..+ ......+..+.+++.+||+.||.+|||+.
T Consensus 292 ~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~ 371 (391)
T PHA03212 292 DCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAE 371 (391)
T ss_pred cCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHH
Confidence 0 011111111000 00 0000000 000000000 01123456788999999999999999999
Q ss_pred HHHH
Q 035782 139 DAAA 142 (159)
Q Consensus 139 ~ll~ 142 (159)
|+++
T Consensus 372 elL~ 375 (391)
T PHA03212 372 ALLD 375 (391)
T ss_pred HHhc
Confidence 9984
No 144
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.82 E-value=2.8e-20 Score=125.18 Aligned_cols=126 Identities=26% Similarity=0.408 Sum_probs=84.8
Q ss_pred CccCCCC---ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccc
Q 035782 1 ILLDEDM---VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~ 76 (159)
|+++.++ .+||+|||+++................+..|+|||++.+..++.++|+||+|++++++++ |..||....
T Consensus 147 il~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~ 226 (277)
T cd05036 147 CLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT 226 (277)
T ss_pred EEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 3555443 689999999986532221111112223567999999988889999999999999999996 888886532
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
... ....+.... ... .+...+..+.+++.+||+.+|++||++.+|++.|+
T Consensus 227 ~~~--~~~~~~~~~------------~~~-----~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 227 NQE--VMEFVTGGG------------RLD-----PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHH--HHHHHHcCC------------cCC-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 211 111111000 000 01234567889999999999999999999999886
No 145
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.82 E-value=4.8e-20 Score=122.72 Aligned_cols=124 Identities=26% Similarity=0.412 Sum_probs=86.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...+.... ......++..|+|||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus 131 i~i~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~ 209 (256)
T cd05059 131 CLVGEDNVVKVSDFGLARYVLDDQYT-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE 209 (256)
T ss_pred EEECCCCcEEECCcccceeccccccc-ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 57888999999999999765422211 1111223457999999888888899999999999999998 788886432211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
......... . ...+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus 210 --~~~~~~~~~----~-------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 210 --VVESVSAGY----R-------------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred --HHHHHHcCC----c-------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 111111000 0 001123456799999999999999999999999876
No 146
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.82 E-value=2e-20 Score=127.41 Aligned_cols=130 Identities=28% Similarity=0.367 Sum_probs=89.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||++..... ........++..|++||+..+..++.++|+||||++++++++ |..||......
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~- 230 (303)
T cd05088 155 ILVGENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA- 230 (303)
T ss_pred EEecCCCcEEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-
Confidence 5788899999999999864311 111111223567999998877778899999999999999997 89998543211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL 152 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~ 152 (159)
....... .. ... ..+...+..+.+++.+||+.+|++||++.+++..|+++.+.-.
T Consensus 231 ----~~~~~~~-~~--------~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 231 ----ELYEKLP-QG--------YRL-----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred ----HHHHHHh-cC--------CcC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 1111100 00 000 0011234568899999999999999999999999998766543
No 147
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.82 E-value=2.3e-20 Score=124.04 Aligned_cols=123 Identities=22% Similarity=0.272 Sum_probs=86.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......++..|++||++.+..++.++|+||||++++++++|..||........
T Consensus 130 i~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~ 207 (256)
T cd06612 130 ILLNEEGQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA 207 (256)
T ss_pred EEECCCCcEEEcccccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh
Confidence 5678899999999999887643221 12234578889999998888888999999999999999999999864322110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... . . ........+......+.+++.+||+.||++|||+.++++
T Consensus 208 ----~~~~-~-~-----------~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 208 ----IFMI-P-N-----------KPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ----hhhh-c-c-----------CCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0000 0 0 000000011234457889999999999999999999885
No 148
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.82 E-value=1.2e-20 Score=129.28 Aligned_cols=119 Identities=22% Similarity=0.262 Sum_probs=84.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++....... .......||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 127 ill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-- 202 (316)
T cd05592 127 VLLDKDGHIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-- 202 (316)
T ss_pred eEECCCCCEEEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--
Confidence 678899999999999997643222 1223456899999999998888899999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH-HHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT-DAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-~ll 141 (159)
......... .+ ..+......+.+++.+||+.||++||++. +++
T Consensus 203 ---~~~~~i~~~------------~~---~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 203 ---ELFDSILND------------RP---HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ---HHHHHHHcC------------CC---CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 111110000 00 00112345678899999999999999875 454
No 149
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.82 E-value=3.6e-20 Score=123.43 Aligned_cols=138 Identities=21% Similarity=0.172 Sum_probs=92.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||++++|.+||+|||+|+.+.-... ..+..++|.+|.|||++.+. .|+...|+||+||++.||++++..|.+...
T Consensus 151 lLi~~~G~lKlaDFGlAra~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-- 226 (323)
T KOG0594|consen 151 LLISSSGVLKLADFGLARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-- 226 (323)
T ss_pred EEECCCCcEeeeccchHHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH--
Confidence 6899999999999999997652222 24557889999999998887 789999999999999999999998876432
Q ss_pred ccHHHHHHhhcC----Ccccchh---hhhc--cccchhhhhchH---HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLS----GELTQVI---DANL--ARDEQSFFVKMD---CLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~----~~~~~~~---~~~~--~~~~~~~~~~~~---~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......+..... ..|.... +... ............ -.....+++.+|++++|.+|.|+..++.
T Consensus 227 ~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 227 IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred HHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence 111111111111 1222211 1100 000000000111 1147889999999999999999998875
No 150
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.82 E-value=3.7e-20 Score=123.55 Aligned_cols=125 Identities=22% Similarity=0.148 Sum_probs=86.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcc-cccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||++.......... ......++..|+|||.+.+..++.++|+||+|++++++++|..||......
T Consensus 135 ilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~- 213 (263)
T cd06625 135 ILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM- 213 (263)
T ss_pred EEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-
Confidence 578888999999999987653211111 112345778899999998888889999999999999999999998643211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
............ ...+......+.+++.+||..+|.+|||+.++++.
T Consensus 214 ----~~~~~~~~~~~~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 214 ----AAIFKIATQPTN-------------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ----HHHHHHhccCCC-------------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000000000000 00112345568889999999999999999999863
No 151
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.82 E-value=1.3e-20 Score=129.61 Aligned_cols=120 Identities=18% Similarity=0.219 Sum_probs=85.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++...... .......||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 126 Ill~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-- 201 (328)
T cd05593 126 LMLDKDGHIKITDFGLCKEGITDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-- 201 (328)
T ss_pred eEECCCCcEEEecCcCCccCCCcc--cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--
Confidence 688999999999999987542211 1223356899999999998888899999999999999999999998643211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
........... ..+......+.+++.+||+.||.+|+ ++.++++
T Consensus 202 ---~~~~~~~~~~~---------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 202 ---KLFELILMEDI---------------KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred ---HHHHHhccCCc---------------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 11111000000 00113345688899999999999997 8888874
No 152
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.82 E-value=3.7e-20 Score=124.91 Aligned_cols=142 Identities=23% Similarity=0.350 Sum_probs=89.0
Q ss_pred CccCCCCceEEcccccceecCCCCCccc-ccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........... .....++..|++||+..+..++.++|+||+|+++++++++..++.....
T Consensus 139 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-- 216 (284)
T cd05081 139 ILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA-- 216 (284)
T ss_pred EEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch--
Confidence 5788899999999999987643222111 1112234469999998888888999999999999999998765432110
Q ss_pred ccHHHHHHhhcC--CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLS--GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
........... .....+.+ .+. .....+.+...+..+.+++.+||..+|++|||+.++++.|+++
T Consensus 217 -~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 217 -EFMRMMGNDKQGQMIVYHLIE-LLK-NNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred -hhhhhcccccccccchHHHHH-HHh-cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000000 00000000 000 0011111234566799999999999999999999999999876
No 153
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.82 E-value=5.9e-20 Score=122.07 Aligned_cols=122 Identities=26% Similarity=0.361 Sum_probs=87.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......|++.|+|||+..+..++.++|+||||++++++++|..||......
T Consensus 132 ili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-- 207 (256)
T cd08529 132 LFLDAYDNVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-- 207 (256)
T ss_pred EEEeCCCCEEEcccccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 5778889999999999987643322 122345788999999988888889999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
.. .......... . .+...+..+.+++.+||+.+|++||++.++++.
T Consensus 208 ~~---~~~~~~~~~~--------~------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 208 AL---ILKIIRGVFP--------P------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HH---HHHHHcCCCC--------C------CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11 1111100000 0 011344578999999999999999999998863
No 154
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.82 E-value=1.6e-20 Score=128.79 Aligned_cols=120 Identities=23% Similarity=0.215 Sum_probs=85.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||+++....... .....+|++.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 127 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-- 202 (318)
T cd05570 127 VLLDSEGHIKIADFGMCKEGILGGV--TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-- 202 (318)
T ss_pred eEECCCCcEEecccCCCeecCcCCC--cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--
Confidence 6788999999999999875322111 122346899999999998888999999999999999999999998643211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH-----HHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM-----TDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~-----~~ll~ 142 (159)
.....+. ... . ..+...+..+.+++.+||+.||.+||++ .+++.
T Consensus 203 ~~~~~i~---~~~--------~-------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 203 ELFQSIL---EDE--------V-------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHH---cCC--------C-------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1111110 000 0 0011234568899999999999999999 77764
No 155
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.81 E-value=2.2e-20 Score=126.25 Aligned_cols=125 Identities=26% Similarity=0.314 Sum_probs=85.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++........ .....|+..|++||++.+. .++.++|+||+|++++++++|..||....
T Consensus 139 il~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~- 214 (288)
T cd06616 139 ILLDRNGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN- 214 (288)
T ss_pred EEEccCCcEEEeecchhHHhccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-
Confidence 5778889999999999976532221 1223578889999988765 57889999999999999999999986432
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.............. +.+... .....+..+.+++.+||+.+|++|||+.++++
T Consensus 215 ---~~~~~~~~~~~~~~-----~~~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 215 ---SVFDQLTQVVKGDP-----PILSNS-----EEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred ---hHHHHHhhhcCCCC-----CcCCCc-----CCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111111111000 000000 01135567899999999999999999999985
No 156
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.81 E-value=1.3e-20 Score=129.24 Aligned_cols=115 Identities=22% Similarity=0.242 Sum_probs=82.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++........ ......||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 127 Ili~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-- 202 (320)
T cd05590 127 VLLDHEGHCKLADFGMCKEGIFNGK--TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-- 202 (320)
T ss_pred eEECCCCcEEEeeCCCCeecCcCCC--cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--
Confidence 6889999999999999876432211 223356899999999998888899999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
.....+. ... . ..+......+.+++.+||+.||.+||++
T Consensus 203 ~~~~~i~---~~~--------~-------~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 203 DLFEAIL---NDE--------V-------VYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHh---cCC--------C-------CCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1111111 000 0 0011234567899999999999999998
No 157
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.81 E-value=1.6e-20 Score=127.25 Aligned_cols=117 Identities=21% Similarity=0.207 Sum_probs=84.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++....... ....|++.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 132 Ili~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-- 204 (291)
T cd05612 132 ILLDKEGHIKLTDFGFAKKLRDRT-----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-- 204 (291)
T ss_pred eEECCCCCEEEEecCcchhccCCc-----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 678899999999999997653221 1246899999999998888899999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~ 142 (159)
.....+.. .. . . .+......+.+++.+||+.||.+|++ ++++++
T Consensus 205 ~~~~~i~~---~~--------~-~------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 205 GIYEKILA---GK--------L-E------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHHHHHHh---CC--------c-C------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 11111100 00 0 0 01122456889999999999999995 888774
No 158
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.81 E-value=4e-20 Score=129.27 Aligned_cols=139 Identities=22% Similarity=0.273 Sum_probs=87.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++...... ....+...+++.|+|||++.+. .++.++|+||+||+++++++|+.||.......
T Consensus 134 ili~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 212 (372)
T cd07853 134 LLVNSNCVLKICDFGLARVEEPDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ 212 (372)
T ss_pred EEECCCCCEEeccccceeecccCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH
Confidence 678999999999999998653222 1122334578899999988764 47889999999999999999999997533211
Q ss_pred ccHHHHHHhhcC-Ccccc----------hhhhhccccch---hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLS-GELTQ----------VIDANLARDEQ---SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
....+..... ..... .+.......+. ...........+.+++.+||+.||.+|||+.+++.
T Consensus 213 --~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 213 --QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred --HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 1111111100 00000 00000000000 00011123567889999999999999999999985
No 159
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.81 E-value=8.4e-20 Score=122.32 Aligned_cols=128 Identities=27% Similarity=0.484 Sum_probs=88.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccc---cccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTM---ATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~---gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~ 76 (159)
|+++.++.+||+|||++................ .+..|++||++.+..++.++|+||+|++++++++ |..||....
T Consensus 137 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~ 216 (269)
T cd05065 137 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 216 (269)
T ss_pred EEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC
Confidence 577888999999999987654322211111111 2357999999988888999999999999999885 888885432
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.. .....+.... ..+.+.+++..+.+++..||..+|++||++.+++..|+++
T Consensus 217 ~~--~~~~~i~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 217 NQ--DVINAIEQDY-----------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HH--HHHHHHHcCC-----------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 1111111100 0011124456788999999999999999999999998875
No 160
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.81 E-value=4.3e-20 Score=125.44 Aligned_cols=123 Identities=16% Similarity=0.176 Sum_probs=86.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......++..|++||.+.+..++.++|+||||++++++++|..||........
T Consensus 146 ili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~ 223 (296)
T cd06655 146 VLLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223 (296)
T ss_pred EEECCCCCEEEccCccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 5788899999999999876543221 12234578899999998888888999999999999999999999865322110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
........... ...+...+..+.+++.+||..||.+|||+.++++
T Consensus 224 --~~~~~~~~~~~---------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 224 --LYLIATNGTPE---------------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred --HHHHHhcCCcc---------------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00010000000 0011234456888999999999999999999983
No 161
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.81 E-value=4.7e-20 Score=125.26 Aligned_cols=123 Identities=18% Similarity=0.197 Sum_probs=86.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......+++.|+|||.+.+..++.++|+||||++++++++|..||.......
T Consensus 147 ill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~- 223 (296)
T cd06654 147 ILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR- 223 (296)
T ss_pred EEEcCCCCEEECccccchhcccccc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 5788899999999999876532221 1223457889999999888778899999999999999999999986432211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.+....... ... + ..+......+.+++.+||..+|++|||+.+++.
T Consensus 224 ---~~~~~~~~~-~~~-----~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 224 ---ALYLIATNG-TPE-----L-------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ---hHHHHhcCC-CCC-----C-------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 111000000 000 0 001234456888999999999999999999986
No 162
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.81 E-value=1.2e-20 Score=129.87 Aligned_cols=116 Identities=24% Similarity=0.217 Sum_probs=83.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++....... ....|++.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus 149 Ill~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--- 220 (329)
T PTZ00263 149 LLLDNKGHVKVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--- 220 (329)
T ss_pred EEECCCCCEEEeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH---
Confidence 688999999999999998764321 124689999999999888889999999999999999999999864221
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll 141 (159)
........... +. .+......+.+++.+||+.||.+|++ +.+++
T Consensus 221 --~~~~~~i~~~~--------~~-------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 221 --FRIYEKILAGR--------LK-------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred --HHHHHHHhcCC--------cC-------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 11111111000 00 01123346788999999999999997 57776
No 163
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.81 E-value=2.1e-20 Score=128.39 Aligned_cols=120 Identities=20% Similarity=0.222 Sum_probs=85.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++........ ......|++.|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus 126 Ill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~- 202 (323)
T cd05595 126 LMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER- 202 (323)
T ss_pred EEEcCCCCEEecccHHhccccCCCC--ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-
Confidence 6788999999999999875322111 1223568999999999988888999999999999999999999986432111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
.......... . .+......+.+++.+||+.||.+|+ ++.++++
T Consensus 203 ----~~~~~~~~~~--------~-------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 203 ----LFELILMEEI--------R-------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ----HHHHHhcCCC--------C-------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1110000000 0 0113455788999999999999998 7888774
No 164
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.81 E-value=7.6e-20 Score=126.56 Aligned_cols=135 Identities=21% Similarity=0.203 Sum_probs=85.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++..... .....|++.|+|||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus 149 il~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 223 (343)
T cd07878 149 VAVNEDCELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID 223 (343)
T ss_pred EEECCCCCEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH
Confidence 57889999999999999875321 223468899999998876 467889999999999999999999986432111
Q ss_pred ccHHHHHHhhcCCcccchhh--------hh---ccccchh--hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVID--------AN---LARDEQS--FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
...... ............ .. +...+.. ........+.+.+++.+|++.||.+|||+.+++.
T Consensus 224 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 224 -QLKRIM-EVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred -HHHHHH-HHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 011110 000000000000 00 0000000 0000112345789999999999999999999984
No 165
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.81 E-value=1.5e-19 Score=123.72 Aligned_cols=71 Identities=18% Similarity=0.233 Sum_probs=55.4
Q ss_pred CCCCceEEcccccceecCCCCC-cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 4 DEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 4 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
+.++.+||+|||+++....... ........||+.|+|||++.+. .++.++|+||+|++++++++|..||..
T Consensus 146 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 146 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 4567899999999987643221 1122335688999999988764 578899999999999999999999864
No 166
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.81 E-value=6.5e-20 Score=124.27 Aligned_cols=123 Identities=20% Similarity=0.172 Sum_probs=82.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.++.+||+|||++...... ........+++.|++||++. ...++.++|+||+|+++|++++|..||...
T Consensus 141 ili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 218 (292)
T cd06644 141 VLLTLDGDIKLADFGVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 218 (292)
T ss_pred EEEcCCCCEEEccCccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence 57788899999999998654321 11122345788999999874 334677899999999999999999998643
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
... .......... ......+......+.+++.+||+.+|++||++.++++
T Consensus 219 ~~~-----~~~~~~~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 219 NPM-----RVLLKIAKSE------------PPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred cHH-----HHHHHHhcCC------------CccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 211 1111111000 0000111234456888999999999999999999975
No 167
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.81 E-value=1.8e-20 Score=129.17 Aligned_cols=126 Identities=17% Similarity=0.182 Sum_probs=87.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++..... ......|++.|+|||++.+..++.++|+||+|++++++++|..||......+.
T Consensus 132 il~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~ 206 (333)
T cd05600 132 FLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET 206 (333)
T ss_pred EEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence 6788999999999999976532 12335689999999999888899999999999999999999999865322111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
...+... ...+.......+ .......+.+++.+||..+|.+||++.++++.
T Consensus 207 --~~~i~~~-----~~~~~~~~~~~~-----~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 207 --WENLKYW-----KETLQRPVYDDP-----RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred --HHHHHhc-----cccccCCCCCcc-----ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0111100 000000000000 01345678899999999999999999999853
No 168
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.81 E-value=1.1e-19 Score=120.52 Aligned_cols=125 Identities=30% Similarity=0.432 Sum_probs=86.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++......... ......++..|+|||++.+..++.++|+||+|++++++++ |..||.......
T Consensus 124 ili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~ 202 (250)
T cd05085 124 CLVGENNVLKISDFGMSRQEDDGIYS-SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ 202 (250)
T ss_pred EEEcCCCeEEECCCccceeccccccc-cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence 57788999999999998764322111 1111234567999999888888899999999999999998 888886432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
....+.... . . ..+...+..+.+++.+||..+|.+||++.++++.|.
T Consensus 203 --~~~~~~~~~----~--------~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 203 --AREQVEKGY----R--------M-----SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred --HHHHHHcCC----C--------C-----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 111111000 0 0 001134567899999999999999999999998874
No 169
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.81 E-value=1e-19 Score=121.32 Aligned_cols=126 Identities=25% Similarity=0.405 Sum_probs=89.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||++........ .......++..|++||+..+..++.++|+||||++++++++ |..||......
T Consensus 133 i~i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~- 210 (260)
T cd05067 133 ILVSETLCCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP- 210 (260)
T ss_pred EEEcCCCCEEEccCcceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-
Confidence 5788899999999999977642221 11222335678999999888788889999999999999998 99998643211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
........... .+.+...+..+.+++.+||..+|++||++++++..|+.
T Consensus 211 -~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 211 -EVIQNLERGYR-----------------MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -HHHHHHHcCCC-----------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 11111110000 00112345679999999999999999999999998875
No 170
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.81 E-value=1.7e-20 Score=128.70 Aligned_cols=120 Identities=21% Similarity=0.220 Sum_probs=85.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++........ ......|++.|+|||++.+..++.++|+||+|++++++++|+.||......
T Consensus 127 ill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-- 202 (321)
T cd05591 127 ILLDAEGHCKLADFGMCKEGILNGV--TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-- 202 (321)
T ss_pred eEECCCCCEEEeecccceecccCCc--cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--
Confidence 6789999999999999876432221 123356899999999998888899999999999999999999999653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-------cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-------YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-------t~~~ll~ 142 (159)
.....+. .... ..+......+.+++.+||+.||++|+ ++.++++
T Consensus 203 ~~~~~i~---~~~~---------------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 203 DLFESIL---HDDV---------------LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHH---cCCC---------------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 1111111 0000 00112345678899999999999999 7777763
No 171
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.81 E-value=8.4e-20 Score=133.17 Aligned_cols=128 Identities=20% Similarity=0.208 Sum_probs=94.0
Q ss_pred CccCCCCceEEcccccceecCCCCCc-ccc------cccccccccccccc---cCCCccccchhhHhHHHHHHHHHhcCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQ------TMTMATIGYMAPEY---GSEGIVSTKCDVYSYGVLLMETFTRKK 70 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~------~~~~gt~~~~~pe~---~~~~~~~~~~dv~s~g~~~~~~~~~~~ 70 (159)
|||..+|..||||||.+..-...... ... -...-|+.|++||+ +.+.+.+.++|||++||++|.++....
T Consensus 177 vLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~ 256 (738)
T KOG1989|consen 177 VLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTT 256 (738)
T ss_pred eEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCC
Confidence 68999999999999998653222211 000 01236889999996 456688999999999999999999999
Q ss_pred CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
||+.... -.++. ..+.++........+..|++.||+.||++||++.+++..+.+++..
T Consensus 257 PFe~sg~-----------------laIln-----g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 257 PFEESGK-----------------LAILN-----GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred CcCcCcc-----------------eeEEe-----ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 9976311 11211 1112222236778899999999999999999999999999888764
No 172
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1.1e-20 Score=136.09 Aligned_cols=118 Identities=23% Similarity=0.272 Sum_probs=87.7
Q ss_pred CCCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCcccccccccH
Q 035782 5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSL 82 (159)
Q Consensus 5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~ 82 (159)
=+|.+||+|||-++... +......++.||..|||||++..+ +|+.++|||||||++.||.+|++||......
T Consensus 711 ySGvlKISDFGTsKRLA--ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp---- 784 (1226)
T KOG4279|consen 711 YSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP---- 784 (1226)
T ss_pred ccceEEecccccchhhc--cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh----
Confidence 35899999999997653 222234457799999999987655 6899999999999999999999999653211
Q ss_pred HHHHHhhcCCcccchhh-hhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 83 RDWVNKSLSGELTQVID-ANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
....+. .+.+.++ +.|.....+..+++.+|+.+||.+||++.+++.
T Consensus 785 -----------qAAMFkVGmyKvHP---~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 785 -----------QAAMFKVGMYKVHP---PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred -----------hHhhhhhcceecCC---CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 011111 1122222 245577788999999999999999999999984
No 173
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.81 E-value=1.1e-19 Score=121.20 Aligned_cols=125 Identities=22% Similarity=0.295 Sum_probs=85.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||.+....... .......++..|++||...+. .++.++|+||+|++++++++|..||.....
T Consensus 132 i~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~ 209 (262)
T cd06613 132 ILLTEDGDVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP 209 (262)
T ss_pred EEECCCCCEEECccccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 578899999999999987654321 112234578889999988766 778899999999999999999999865321
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..... ..... ... ..........+..+.+++.+||..+|.+|||+.+++.
T Consensus 210 ~~~~~--~~~~~---~~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 210 MRALF--LISKS---NFP----------PPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHH--HHHhc---cCC----------CccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11100 00000 000 0000011234567899999999999999999999874
No 174
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.81 E-value=4.7e-20 Score=124.14 Aligned_cols=123 Identities=22% Similarity=0.312 Sum_probs=85.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ .....|+..|+|||++.+..++.++|+||+|++++++++|..||...... .
T Consensus 126 ili~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~ 201 (277)
T cd05607 126 VLLDDQGNCRLSDLGLAVELKDGKT---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-V 201 (277)
T ss_pred EEEcCCCCEEEeeceeeeecCCCce---eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-h
Confidence 5788899999999999977643221 22345888999999988888899999999999999999999998643211 1
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
............. .... .......+.+++.+||+.||.+||++.|++
T Consensus 202 ~~~~~~~~~~~~~--------~~~~------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 202 AKEELKRRTLEDE--------VKFE------HQNFTEESKDICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred hHHHHHHHhhccc--------cccc------cccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence 1111111111000 0000 012345688999999999999999997655
No 175
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.81 E-value=8.4e-20 Score=122.62 Aligned_cols=122 Identities=20% Similarity=0.251 Sum_probs=86.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||+++...... .......++..|++||++.+..++.++|+||+|++++++++|..||.......
T Consensus 129 i~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~- 205 (274)
T cd06609 129 ILLSEEGDVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR- 205 (274)
T ss_pred EEECCCCCEEEcccccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-
Confidence 578889999999999998765321 12233457888999999988888999999999999999999999986432110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
....+.... . +.+.. ...+..+.+++.+||..+|++|||++++++
T Consensus 206 -~~~~~~~~~----~----~~~~~--------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 206 -VLFLIPKNN----P----PSLEG--------NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -HHHHhhhcC----C----CCCcc--------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 000000000 0 00000 014456888999999999999999999974
No 176
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.81 E-value=5.5e-20 Score=124.00 Aligned_cols=124 Identities=20% Similarity=0.252 Sum_probs=86.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......|++.|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus 128 ili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~- 204 (280)
T cd05608 128 VLLDNDGNVRISDLGLAVELKDGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV- 204 (280)
T ss_pred EEECCCCCEEEeeCccceecCCCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-
Confidence 5788899999999999977643222 1223468899999999988888999999999999999999999986432110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
............ . ...+...+..+.+++.+||+.||++|| +++++++
T Consensus 205 ~~~~~~~~~~~~--------~-------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 205 ENKELKQRILND--------S-------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred hHHHHHHhhccc--------C-------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 011111100000 0 001123456788999999999999999 7777774
No 177
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.81 E-value=2.1e-20 Score=128.35 Aligned_cols=115 Identities=20% Similarity=0.240 Sum_probs=82.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++...... .......||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 132 ill~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-- 207 (323)
T cd05616 132 VMLDSEGHIKIADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-- 207 (323)
T ss_pred eEECCCCcEEEccCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--
Confidence 688999999999999987543211 1223356899999999998888999999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
.....+... . . ..+......+.+++.+|++.||++|+++
T Consensus 208 ~~~~~i~~~---~--------~-------~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 208 ELFQSIMEH---N--------V-------AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHHHHhC---C--------C-------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 111111100 0 0 0011334567889999999999999985
No 178
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.81 E-value=7.6e-20 Score=122.51 Aligned_cols=124 Identities=21% Similarity=0.267 Sum_probs=88.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||.+....... ......++..|++||.+.+..++.++|+||+|++++++++|..||......
T Consensus 145 il~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-- 219 (269)
T cd08528 145 IMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-- 219 (269)
T ss_pred EEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--
Confidence 578889999999999998764332 223345788899999998878889999999999999999999998542211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
....... ..... +.. .......+.+++.+||+.||++||++.|+...++
T Consensus 220 ~~~~~~~---~~~~~--------~~~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 220 SLATKIV---EAVYE--------PLP-----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHHh---hccCC--------cCC-----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111110 00000 000 0123456889999999999999999999988764
No 179
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.81 E-value=1.2e-19 Score=120.71 Aligned_cols=123 Identities=30% Similarity=0.475 Sum_probs=87.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.++....... ....+..|++||+.....++.++|+||+|++++++++ |..||.......
T Consensus 133 ili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~ 207 (256)
T cd05039 133 VLVSEDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 207 (256)
T ss_pred EEEeCCCCEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 5788899999999999977632211 1224557999999887788889999999999999997 888886432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
......... .. ..+...+..+.+++.+||..+|++|||+.++++.|+++
T Consensus 208 --~~~~~~~~~------------~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 208 --VVPHVEKGY------------RM-----EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred --HHHHHhcCC------------CC-----CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 111111000 00 00113456788999999999999999999999998753
No 180
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.81 E-value=2.5e-20 Score=128.45 Aligned_cols=125 Identities=22% Similarity=0.207 Sum_probs=85.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||+++.+...... ......||+.|+|||++.+. .++.++|+||+|++++++++|..||.......
T Consensus 136 ili~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 214 (332)
T cd05614 136 ILLDSEGHVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN 214 (332)
T ss_pred eEECCCCCEEEeeCcCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC
Confidence 68899999999999999765432222 12235689999999998765 47888999999999999999999986432111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
. ........ ....+ ..+......+.+++.+||+.||++|| ++.++++
T Consensus 215 ~-~~~~~~~~------------~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 215 T-QSEVSRRI------------LKCDP---PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred C-HHHHHHHH------------hcCCC---CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1 10110000 00000 01113445688899999999999999 7778774
No 181
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.81 E-value=8.3e-20 Score=123.06 Aligned_cols=143 Identities=22% Similarity=0.327 Sum_probs=91.0
Q ss_pred CccCCCCceEEcccccceecCCCCCccc-ccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||.+........... .....++..|++||...+..++.++|+||+|++++++++|..|+.......
T Consensus 140 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~ 219 (284)
T cd05038 140 ILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF 219 (284)
T ss_pred EEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchh
Confidence 5788889999999999987643222111 111234556999998887788889999999999999999998875422111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
... ............+...+.. ......+..++..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus 220 ~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 220 LRM---IGIAQGQMIVTRLLELLKE-GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccc---cccccccccHHHHHHHHHc-CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 000 0000000000000000000 001111224557799999999999999999999999999876
No 182
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.81 E-value=1.5e-19 Score=130.52 Aligned_cols=141 Identities=12% Similarity=0.097 Sum_probs=86.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCC-Cccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKP-TDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p-~~~~~~~~ 79 (159)
||++.++.+||+|||+++.+...... ......|++.|++||++.+..++.++|+||+|+++++++++..+ +.......
T Consensus 298 ILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~ 376 (501)
T PHA03210 298 IFLNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP 376 (501)
T ss_pred EEECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence 68889999999999999876432221 22235689999999999888899999999999999999998754 33221111
Q ss_pred -ccHHHHHHhh------cCCcccchhh---h-hcccc---chhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 -MSLRDWVNKS------LSGELTQVID---A-NLARD---EQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 -~~~~~~~~~~------~~~~~~~~~~---~-~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..+...+... .+.....+.+ . .+... ..........+..+.+++.+|++.||.+|||+.|++.
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1111111100 0000000000 0 00000 0000111123445777899999999999999999985
No 183
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.81 E-value=7.8e-20 Score=123.41 Aligned_cols=142 Identities=16% Similarity=0.268 Sum_probs=89.3
Q ss_pred CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|+||+|+++++++++..|.......
T Consensus 140 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~- 218 (284)
T cd05079 140 VLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL- 218 (284)
T ss_pred EEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch-
Confidence 57788999999999999876432221 1122344666799999988777889999999999999999876553221000
Q ss_pred ccHHHHHHhhcC-CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLS-GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
.......... ......+...... ...+.+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 219 --~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 219 --FLKMIGPTHGQMTVTRLVRVLEEG--KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred --hhhhcccccccccHHHHHHHHHcC--ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000000000 0000000000000 00111224567899999999999999999999999999886
No 184
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.80 E-value=3.1e-19 Score=137.69 Aligned_cols=141 Identities=28% Similarity=0.450 Sum_probs=96.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++..++. ||...... ......+++.|+|||++.+..++.++||||||+++||+++|+.||........
T Consensus 814 il~~~~~~~~~~-~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~ 886 (968)
T PLN00113 814 IIIDGKDEPHLR-LSLPGLLC------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHG 886 (968)
T ss_pred EEECCCCceEEE-eccccccc------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCC
Confidence 456666666664 55443321 11223578899999999888899999999999999999999999865444444
Q ss_pred cHHHHHHhhcC-CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 81 SLRDWVNKSLS-GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
....|...... ......+++.+.... .....+...+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 887 SIVEWARYCYSDCHLDMWIDPSIRGDV---SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred cHHHHHHHhcCccchhheeCccccCCC---CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 45555443322 122333344332211 112345667889999999999999999999999999987743
No 185
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.80 E-value=9.9e-20 Score=129.86 Aligned_cols=143 Identities=13% Similarity=0.079 Sum_probs=87.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc--
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG-- 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~-- 78 (159)
||++.++.+||+|||+++...............||+.|++||++.+..++.++|+|||||++|+++.|..++-.....
T Consensus 291 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~ 370 (461)
T PHA03211 291 VLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDE 370 (461)
T ss_pred EEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccc
Confidence 688899999999999998764332222223356899999999998888999999999999999999877553221110
Q ss_pred c----ccHHHHHHhhc--CCcccc-----hhhhhcc-----ccc-hhh---hhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 79 E----MSLRDWVNKSL--SGELTQ-----VIDANLA-----RDE-QSF---FVKMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 79 ~----~~~~~~~~~~~--~~~~~~-----~~~~~~~-----~~~-~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
. ......+.... ...+.. +...... ..+ ... .........+.+++.+||..||.+|||+.
T Consensus 371 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~ 450 (461)
T PHA03211 371 RRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAA 450 (461)
T ss_pred cCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHH
Confidence 0 11111111110 000000 0000000 000 000 00011234678899999999999999999
Q ss_pred HHHHH
Q 035782 139 DAAAK 143 (159)
Q Consensus 139 ~ll~~ 143 (159)
|+++.
T Consensus 451 elL~h 455 (461)
T PHA03211 451 ELLRL 455 (461)
T ss_pred HHhhC
Confidence 99863
No 186
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.80 E-value=9.5e-20 Score=123.14 Aligned_cols=123 Identities=21% Similarity=0.282 Sum_probs=86.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|++++++.++|+|||++........ .....|++.|++||++.+..++.++|+||+|++++++++|..||.......
T Consensus 133 il~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~- 208 (285)
T cd05605 133 ILLDDYGHIRISDLGLAVEIPEGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV- 208 (285)
T ss_pred EEECCCCCEEEeeCCCceecCCCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-
Confidence 5788889999999999987643221 223468899999999888888899999999999999999999997532111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
....+...+... ... .+...+..+.+++.+||+.||++|| ++.++++
T Consensus 209 -~~~~~~~~~~~~--------~~~------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 209 -KREEVERRVKED--------QEE------YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred -HHHHHHHHhhhc--------ccc------cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 001111100000 000 0113455688999999999999999 8888864
No 187
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.80 E-value=5.1e-20 Score=123.22 Aligned_cols=127 Identities=18% Similarity=0.230 Sum_probs=84.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++..+..... ......++..|+|||.+. ...++.++|+||+|++++++++|..||.....
T Consensus 137 ill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~ 214 (267)
T cd06646 137 ILLTDNGDVKLADFGVAAKITATIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHP 214 (267)
T ss_pred EEECCCCCEEECcCccceeeccccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccch
Confidence 5778899999999999986632211 122345788999999874 33467889999999999999999999754321
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
.... ......... .+.. ......+..+.+++.+||..+|++|||++++++.|
T Consensus 215 ~~~~-----~~~~~~~~~---~~~~-------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 215 MRAL-----FLMSKSNFQ---PPKL-------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred hhhh-----eeeecCCCC---CCCC-------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1000 000000000 0000 00112346788999999999999999999998643
No 188
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.80 E-value=6.9e-20 Score=122.40 Aligned_cols=128 Identities=24% Similarity=0.303 Sum_probs=86.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcc--cccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV--TQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++..+....... ......|+..|++||++... .++.++|+||+|++++++++|..||.....
T Consensus 133 i~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~ 212 (267)
T cd06610 133 ILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP 212 (267)
T ss_pred EEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh
Confidence 567888999999999987765433221 22334578899999988766 678899999999999999999999864322
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.. ........ . . +.+.... .....+..+.+++.+||..||++||++.+++.
T Consensus 213 ~~-~~~~~~~~----~-~----~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 213 MK-VLMLTLQN----D-P----PSLETGA----DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred hh-hHHHHhcC----C-C----CCcCCcc----ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11 11111100 0 0 0000000 01134567889999999999999999999875
No 189
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.80 E-value=8.8e-20 Score=122.90 Aligned_cols=126 Identities=21% Similarity=0.256 Sum_probs=87.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++....... .....|+..|+|||++.+..++.++|+||+|++++++++|..||........
T Consensus 126 ill~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~ 201 (279)
T cd06619 126 MLVNTRGQVKLCDFGVSTQLVNSI----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG 201 (279)
T ss_pred EEECCCCCEEEeeCCcceeccccc----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccc
Confidence 578889999999999997653221 2234688899999999888889999999999999999999999865332111
Q ss_pred c--HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 S--LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
. ........... .... .........+.+++.+||+.+|.+||++.++++.
T Consensus 202 ~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 202 SLMPLQLLQCIVDE------------DPPV-LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ccchHHHHHHHhcc------------CCCC-CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1 11111000000 0000 0001234568899999999999999999999853
No 190
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.80 E-value=6.1e-20 Score=123.75 Aligned_cols=122 Identities=17% Similarity=0.215 Sum_probs=83.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.++.++|+|||++........ ......|++.|+|||.+. ...++.++|+||+|++++++++|..||...
T Consensus 152 ili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~ 229 (282)
T cd06636 152 VLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM 229 (282)
T ss_pred EEECCCCCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcccc
Confidence 5788899999999999876532111 123355888999999865 235677899999999999999999998643
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..... ... .... ..........+..+.+++.+||+.||.+|||+.|+++
T Consensus 230 ~~~~~-----~~~--------~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 230 HPMRA-----LFL--------IPRN-----PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CHHhh-----hhh--------HhhC-----CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 21100 000 0000 0000011134567899999999999999999999875
No 191
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.80 E-value=4.4e-20 Score=126.49 Aligned_cols=119 Identities=24% Similarity=0.261 Sum_probs=83.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++........ ......||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 127 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-- 202 (316)
T cd05619 127 ILLDTDGHIKIADFGMCKENMLGDA--KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-- 202 (316)
T ss_pred EEECCCCCEEEccCCcceECCCCCC--ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--
Confidence 5788999999999999875322111 122356899999999998888899999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH-HHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT-DAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-~ll 141 (159)
.....+.... +. .+......+.+++.+||+.||.+||++. +++
T Consensus 203 ~~~~~i~~~~---------~~---------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 203 ELFQSIRMDN---------PC---------YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHHhCC---------CC---------CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1111111000 00 0112334578899999999999999996 554
No 192
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.80 E-value=4.1e-20 Score=126.60 Aligned_cols=119 Identities=21% Similarity=0.224 Sum_probs=83.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++....... ......|++.|+|||++.+..++.++|+||+|++++++++|..||..... .
T Consensus 127 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~ 202 (316)
T cd05620 127 VMLDRDGHIKIADFGMCKENVFGDN--RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--D 202 (316)
T ss_pred eEECCCCCEEeCccCCCeecccCCC--ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--H
Confidence 6789999999999999875321111 22345689999999999888899999999999999999999999864321 1
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH-HHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT-DAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~-~ll 141 (159)
.....+.... +.. +......+.+++.+||+.||++|+++. +++
T Consensus 203 ~~~~~~~~~~---------~~~---------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 203 ELFESIRVDT---------PHY---------PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHhCC---------CCC---------CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1111111000 000 112344678899999999999999974 554
No 193
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.80 E-value=3.8e-20 Score=127.18 Aligned_cols=115 Identities=21% Similarity=0.246 Sum_probs=81.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++........ ......||+.|+|||++.+..++.++|+||+|++++++++|+.||......
T Consensus 132 ill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-- 207 (324)
T cd05587 132 VMLDAEGHIKIADFGMCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-- 207 (324)
T ss_pred eEEcCCCCEEEeecCcceecCCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--
Confidence 6788999999999999875322111 122356899999999998888899999999999999999999998643211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
.....+.... . . .+......+.+++.+||..||.+|+++
T Consensus 208 ~~~~~i~~~~-----------~-~------~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 208 ELFQSIMEHN-----------V-S------YPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred HHHHHHHcCC-----------C-C------CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1111110000 0 0 011234567899999999999999986
No 194
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.80 E-value=1.8e-19 Score=119.79 Aligned_cols=124 Identities=28% Similarity=0.385 Sum_probs=85.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.++...+... .......++..|++||.+.+..++.++|+||+|++++++++ |..||.......
T Consensus 131 i~i~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 209 (256)
T cd05112 131 CLVGENQVVKVSDFGMTRFVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE 209 (256)
T ss_pred EEEcCCCeEEECCCcceeecccCcc-cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence 4678889999999999876543221 11122334668999999888788899999999999999998 888886422111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
....+.. ..+. . .+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus 210 --~~~~~~~----~~~~-~------------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 210 --VVETINA----GFRL-Y------------KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred --HHHHHhC----CCCC-C------------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1111100 0000 0 0012345789999999999999999999999876
No 195
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.80 E-value=1.7e-20 Score=126.09 Aligned_cols=133 Identities=19% Similarity=0.217 Sum_probs=87.6
Q ss_pred CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-ccHH
Q 035782 5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE-MSLR 83 (159)
Q Consensus 5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~-~~~~ 83 (159)
++..+|+.|||.|..... ..+..+.|..|.|||++.+.+++...||||+||+++|+.+|...|+.-.+.+ ..+.
T Consensus 247 ks~~I~vIDFGsAtf~~e-----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMM 321 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHE-----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMM 321 (415)
T ss_pred CCcceEEEecCCcceecc-----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHH
Confidence 456789999999987421 1244678999999999999999999999999999999999999888644211 1122
Q ss_pred HHHHhhcCCcc------cchhh-hhcc--------------ccc----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 84 DWVNKSLSGEL------TQVID-ANLA--------------RDE----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 84 ~~~~~~~~~~~------~~~~~-~~~~--------------~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
+.+....+... +..+. ..+. ..+ ........+...+++|+.++|..||++|+|+.
T Consensus 322 erIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~ 401 (415)
T KOG0671|consen 322 ERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLR 401 (415)
T ss_pred HHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHH
Confidence 22211111000 00000 0000 000 01112234567799999999999999999999
Q ss_pred HHHH
Q 035782 139 DAAA 142 (159)
Q Consensus 139 ~ll~ 142 (159)
|++.
T Consensus 402 EAL~ 405 (415)
T KOG0671|consen 402 EALS 405 (415)
T ss_pred HHhc
Confidence 9874
No 196
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.80 E-value=1.3e-19 Score=121.27 Aligned_cols=128 Identities=27% Similarity=0.466 Sum_probs=89.7
Q ss_pred CccCCCCceEEcccccceecCCCCCccc-ccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVT-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
|+++.++.+|++|||++..+........ .....++..|++||+..+..++.++|+||||++++++++ |..||......
T Consensus 137 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~ 216 (267)
T cd05066 137 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ 216 (267)
T ss_pred EEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH
Confidence 5778899999999999987643322111 111223567999999988888999999999999999886 99998653221
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
+ ....+.... . .+.+...+..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 217 ~--~~~~~~~~~----~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 217 D--VIKAIEEGY----R-------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred H--HHHHHhCCC----c-------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 1 111111000 0 001123456788999999999999999999999999875
No 197
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.80 E-value=9.9e-20 Score=122.06 Aligned_cols=123 Identities=21% Similarity=0.265 Sum_probs=83.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.++.+||+|||.+....... .......++..|+|||++.. ..++.++|+||+|++++++++|..||...
T Consensus 144 i~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 221 (275)
T cd06608 144 ILLTKNAEVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM 221 (275)
T ss_pred EEEccCCeEEECCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence 578889999999999987654222 12233557889999998643 24567899999999999999999998643
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... .... ....... ....+......+.+++.+||..||++|||+.++++
T Consensus 222 ~~~~-~~~~----~~~~~~~------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 222 HPMR-ALFK----IPRNPPP------------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred chHH-HHHH----hhccCCC------------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 2111 0100 0000000 00111234567889999999999999999999875
No 198
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.80 E-value=5.1e-20 Score=126.78 Aligned_cols=121 Identities=20% Similarity=0.261 Sum_probs=82.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE- 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~- 79 (159)
|+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus 127 ili~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~ 204 (329)
T cd05618 127 VLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 204 (329)
T ss_pred EEECCCCCEEEeeCCccccccCCCC--ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC
Confidence 6788999999999999875322111 1233568999999999988888999999999999999999999986422111
Q ss_pred --ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 80 --MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
.....+..... ..... ..+......+.+++.+||+.||.+||++
T Consensus 205 ~~~~~~~~~~~~i-----------~~~~~---~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 205 PDQNTEDYLFQVI-----------LEKQI---RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred cccccHHHHHHHH-----------hcCCC---CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 11111111100 00000 0112344567899999999999999984
No 199
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.80 E-value=2.3e-20 Score=128.23 Aligned_cols=116 Identities=22% Similarity=0.213 Sum_probs=83.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++........ ......|++.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus 127 Ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--- 201 (323)
T cd05575 127 ILLDSQGHVVLTDFGLCKEGIEHSK--TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--- 201 (323)
T ss_pred eEECCCCcEEEeccCCCcccccCCC--ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---
Confidence 6889999999999999875422111 22335689999999999888889999999999999999999999865321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
........... .. .+...+..+.+++.+||+.||.+||++.
T Consensus 202 --~~~~~~i~~~~--------~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 202 --AEMYDNILNKP--------LR-------LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred --HHHHHHHHcCC--------CC-------CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 11111111000 00 0112355788999999999999999974
No 200
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.80 E-value=1.2e-19 Score=121.52 Aligned_cols=129 Identities=19% Similarity=0.280 Sum_probs=81.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-------CccccchhhHhHHHHHHHHHh-cCCCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-------GIVSTKCDVYSYGVLLMETFT-RKKPT 72 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~-~~~p~ 72 (159)
|+++.++.+||+|||++................++..|+|||+... ..++.++|+||+|++++++++ |..||
T Consensus 131 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~ 210 (269)
T cd05042 131 CQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPY 210 (269)
T ss_pred eEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCC
Confidence 5788999999999999865432221111222335667999997532 346788999999999999998 77787
Q ss_pred cccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 73 DEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
......+ ....... .....+..+.+ +...+..+.+++..|| .||++|||+++|+..|
T Consensus 211 ~~~~~~~-~~~~~~~----~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 211 PDLSDEQ-VLKQVVR----EQDIKLPKPQL---------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CcCCHHH-HHHHHhh----ccCccCCCCcc---------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 6432211 0111111 00001111111 1123455677888898 5999999999999876
No 201
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.80 E-value=2.7e-19 Score=119.28 Aligned_cols=121 Identities=22% Similarity=0.320 Sum_probs=87.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......++..|++||.+.+..++.++|+||+|++++++++|..||..... .
T Consensus 141 ili~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~ 216 (265)
T cd08217 141 IFLDANNNVKLGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--L 216 (265)
T ss_pred EEEecCCCEEEecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--H
Confidence 5788889999999999987643322 12234578899999998888888999999999999999999999865321 1
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.....+.. .... ..+...+..+.+++.+||+.+|++||++.+|++
T Consensus 217 ~~~~~~~~---~~~~--------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 217 QLASKIKE---GKFR--------------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HHHHHHhc---CCCC--------------CCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11111111 0000 011244567899999999999999999999885
No 202
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.80 E-value=1.5e-19 Score=124.61 Aligned_cols=151 Identities=18% Similarity=0.287 Sum_probs=98.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-cc-----ccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IV-----STKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~-----~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
||+.+++++.|+|||+|..+.......-....+||.+|||||++-+. .+ -.+.||||+|.++||++++...+..
T Consensus 347 VLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~ 426 (534)
T KOG3653|consen 347 VLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP 426 (534)
T ss_pred eEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC
Confidence 68899999999999999888654444334447899999999987654 12 2469999999999999997644321
Q ss_pred ccccc--ccHHHHHHhhcC-Ccccch-hhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 75 MFIGE--MSLRDWVNKSLS-GELTQV-IDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 75 ~~~~~--~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
....+ ..+...+..... ..++++ +.....+..+.....+..+..+.+.+..||+.||..|.|+..+.+++.++...
T Consensus 427 ~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 427 GPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred CCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 01111 111111111110 111111 12222233333333445677899999999999999999999999998888755
Q ss_pred h
Q 035782 151 F 151 (159)
Q Consensus 151 ~ 151 (159)
-
T Consensus 507 ~ 507 (534)
T KOG3653|consen 507 W 507 (534)
T ss_pred C
Confidence 4
No 203
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.80 E-value=2.6e-19 Score=120.50 Aligned_cols=122 Identities=20% Similarity=0.250 Sum_probs=87.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++++|||++........ ......++..|+|||++.+..++.++|+||||++++++++|..||........
T Consensus 132 il~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~ 209 (277)
T cd06640 132 VLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV 209 (277)
T ss_pred EEEcCCCCEEEcccccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH
Confidence 5778889999999999977643221 12224577889999998887888999999999999999999999865322110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
. ... .... ........+..+.+++.+||+.+|++||++.++++.
T Consensus 210 ~--~~~------------~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 210 L--FLI------------PKNN-----PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred h--hhh------------hcCC-----CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0 000 0000 001122456778999999999999999999999854
No 204
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.80 E-value=7.7e-20 Score=123.98 Aligned_cols=124 Identities=20% Similarity=0.195 Sum_probs=85.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......|+..|+|||...+..++.++|+||+|++++++++|..||......
T Consensus 149 ill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-- 224 (292)
T cd06658 149 ILLTSDGRIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-- 224 (292)
T ss_pred EEEcCCCCEEEccCcchhhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 5788899999999999876532221 122345788999999988778889999999999999999999998642210
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
.....+...... .+. ........+..++.+||..||.+|||+.++++.
T Consensus 225 ~~~~~~~~~~~~--------~~~-------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 225 QAMRRIRDNLPP--------RVK-------DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHHhcCCC--------ccc-------cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 000001110000 000 011234467889999999999999999999863
No 205
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.80 E-value=7.3e-21 Score=125.32 Aligned_cols=122 Identities=23% Similarity=0.354 Sum_probs=95.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++-+|..||+|||++..+. +.-..+++++|||.|+|||++..-.|+..+|+||+|++--||..|++||..+.+..
T Consensus 160 ILLNT~G~AKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR- 236 (502)
T KOG0574|consen 160 ILLNTDGIAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR- 236 (502)
T ss_pred EEEcccchhhhhhccccchhh--hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc-
Confidence 688999999999999997764 23335677899999999999988889999999999999999999999987653311
Q ss_pred cHHHHHHhhcCCcccchhhhhc-cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANL-ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.++ ++ ...++.+-.|......+-++++.|+...|.+|-|+-++++
T Consensus 237 ---------------AIF--MIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 237 ---------------AIF--MIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred ---------------eeE--eccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 111 01 1122233345566777999999999999999999998874
No 206
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.80 E-value=1.3e-19 Score=122.44 Aligned_cols=124 Identities=20% Similarity=0.255 Sum_probs=84.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.++.+||+|||++........ ......|++.|+|||++.. ..++.++|+||+|++++++++|..||...
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~ 232 (286)
T cd06638 155 ILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADL 232 (286)
T ss_pred EEECCCCCEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCC
Confidence 5778889999999999877643221 1223458889999998743 34678999999999999999999998643
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
... .... ...... ......+......+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~----~~~~-~~~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 233 HPM----RALF-KIPRNP------------PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred chh----HHHh-hccccC------------CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 210 0000 000000 00000111234568899999999999999999999874
No 207
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.80 E-value=1.5e-19 Score=120.99 Aligned_cols=125 Identities=20% Similarity=0.272 Sum_probs=82.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++...... ........|+..|+|||++. ...++.++|+||+|++++++++|..||.....
T Consensus 137 ili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~ 214 (267)
T cd06645 137 ILLTDNGHVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP 214 (267)
T ss_pred EEECCCCCEEECcceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc
Confidence 57788899999999998765322 11223346889999999864 34577899999999999999999999754321
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... ......... .+... .....+..+.+++.+||..+|++||++.++++
T Consensus 215 ~~~~-----~~~~~~~~~---~~~~~-------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 215 MRAL-----FLMTKSNFQ---PPKLK-------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred hhhH-----HhhhccCCC---CCccc-------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 1100 000000000 00000 00123446788999999999999999999875
No 208
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.80 E-value=1.6e-19 Score=120.40 Aligned_cols=126 Identities=26% Similarity=0.459 Sum_probs=88.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ .......++..|++||...+..++.++|+||+|++++++++ |..||......
T Consensus 134 ili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~- 211 (261)
T cd05034 134 ILVGENLVCKIADFGLARLIEDDEY-TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR- 211 (261)
T ss_pred EEEcCCCCEEECccccceeccchhh-hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 5788899999999999987643211 11112234567999999888888899999999999999998 88898543211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
.....+.... . .+.+...+..+.+++.+||..+|++||++.+++..|+.
T Consensus 212 -~~~~~~~~~~----~-------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 212 -EVLEQVERGY----R-------------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -HHHHHHHcCC----C-------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1111111000 0 00111235578999999999999999999999988874
No 209
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.80 E-value=4.9e-19 Score=119.75 Aligned_cols=130 Identities=21% Similarity=0.174 Sum_probs=86.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ ....++..|++||.+.+..++.++|+|++|++++++++|..||........
T Consensus 136 il~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 211 (287)
T cd06621 136 ILLTRKGQVKLCDFGVSGELVNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL 211 (287)
T ss_pred EEEecCCeEEEeecccccccccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC
Confidence 5678889999999999876432211 123467789999998888888999999999999999999999875432111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
...+........... .+.... ......+..+.+++.+||..+|++|||+.|+++
T Consensus 212 ~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 212 GPIELLSYIVNMPNP-----ELKDEP---GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ChHHHHHHHhcCCch-----hhccCC---CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 111111111100000 000000 000123567889999999999999999999996
No 210
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.80 E-value=1.3e-19 Score=122.65 Aligned_cols=123 Identities=22% Similarity=0.279 Sum_probs=83.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-----ccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-----IVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-----~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.++.+||+|||++........ ......|+..|++||++... .++.++|+||+|++++++++|..||...
T Consensus 159 ili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 159 ILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred EEEcCCCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 5778889999999999876532221 12234578889999987543 3578899999999999999999998653
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..... ... +..... ..+ ..+......+.+++.+||+.+|++||++.++++
T Consensus 237 ~~~~~-~~~-~~~~~~---~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 237 HPVKT-LFK-IPRNPP---PTL------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cHHHH-HHH-HhcCCC---CCC------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 21110 000 000000 000 001123446889999999999999999999885
No 211
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.80 E-value=3.2e-19 Score=119.52 Aligned_cols=129 Identities=21% Similarity=0.323 Sum_probs=80.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-------CccccchhhHhHHHHHHHHHh-cCCCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-------GIVSTKCDVYSYGVLLMETFT-RKKPT 72 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~-~~~p~ 72 (159)
||++.++.+||+|||++................++..|++||++.. ..++.++|+||||++++++++ +..||
T Consensus 130 il~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~ 209 (268)
T cd05086 130 CFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPY 209 (268)
T ss_pred EEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Confidence 5788899999999999864322111112223457888999998643 234678999999999999986 45676
Q ss_pred cccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 73 DEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
..... ...+..........+.++.+. ......+.+++..|| .+|++||++.+|++.|
T Consensus 210 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 210 SHLSD-----REVLNHVIKDQQVKLFKPQLE---------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCCCH-----HHHHHHHHhhcccccCCCccC---------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 54221 111111111111111111111 112346777899999 6799999999998876
No 212
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.80 E-value=1.4e-19 Score=120.84 Aligned_cols=125 Identities=20% Similarity=0.216 Sum_probs=85.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||.+........ ....++..|++||.+.+..++.++|+||+|++++++++|..||........
T Consensus 132 i~~~~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~ 207 (265)
T cd06605 132 ILVNSRGQIKLCDFGVSGQLVNSLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD 207 (265)
T ss_pred EEECCCCCEEEeecccchhhHHHHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc
Confidence 5788899999999999876532111 115578889999998888889999999999999999999999865321111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.......... .......+ .......+.+++..||..||.+|||+.+++.
T Consensus 208 ~~~~~~~~~~------------~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 208 GIFELLQYIV------------NEPPPRLP-SGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred cHHHHHHHHh------------cCCCCCCC-hhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 1111111111 00000000 0014556889999999999999999999874
No 213
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.80 E-value=1.7e-19 Score=120.12 Aligned_cols=127 Identities=27% Similarity=0.293 Sum_probs=87.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-CCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||.+.... ..........++..|.|||+.. +..++.++|+||+|++++++++|..||.....
T Consensus 129 Il~~~~~~~~l~Dfg~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~-- 204 (260)
T PF00069_consen 129 ILLDENGEVKLIDFGSSVKLS--ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS-- 204 (260)
T ss_dssp EEESTTSEEEESSGTTTEEST--STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--
T ss_pred ccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 578899999999999998642 1222333456888999999988 77889999999999999999999999876411
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......+..... .... ............+.+++..||+.||++||++.++++
T Consensus 205 ~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 205 DDQLEIIEKILK--------RPLP---SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHHHH--------THHH---HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhhhhhhhhccc--------cccc---ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 011111110000 0000 000000112368999999999999999999999875
No 214
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.80 E-value=1.8e-20 Score=128.88 Aligned_cols=118 Identities=23% Similarity=0.242 Sum_probs=84.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++....... ......|++.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 127 ili~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-- 202 (325)
T cd05602 127 ILLDSQGHIVLTDFGLCKENIEHNG--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-- 202 (325)
T ss_pred eEECCCCCEEEccCCCCcccccCCC--CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--
Confidence 6788999999999999875432111 223356899999999998888899999999999999999999998643211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDA 140 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~l 140 (159)
......... ... .+......+.+++.+||+.||.+|+++.+.
T Consensus 203 ---~~~~~i~~~--------~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 203 ---EMYDNILNK--------PLQ-------LKPNITNSARHLLEGLLQKDRTKRLGAKDD 244 (325)
T ss_pred ---HHHHHHHhC--------CcC-------CCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 111111000 000 011344568889999999999999997643
No 215
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.80 E-value=9.2e-20 Score=123.90 Aligned_cols=124 Identities=19% Similarity=0.188 Sum_probs=86.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++....... .......|+..|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 148 ill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-- 223 (297)
T cd06659 148 ILLTLDGRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV-- 223 (297)
T ss_pred eEEccCCcEEEeechhHhhccccc--ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 578899999999999987653222 1223356888999999998878889999999999999999999998642211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
.............. .........+.+++.+||+.+|.+||++.++++.
T Consensus 224 ~~~~~~~~~~~~~~---------------~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 224 QAMKRLRDSPPPKL---------------KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHhccCCCCc---------------cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 11111110000000 0011234567889999999999999999999874
No 216
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.80 E-value=9.3e-21 Score=130.24 Aligned_cols=120 Identities=21% Similarity=0.237 Sum_probs=85.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++....... ......|++.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 127 Ill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-- 202 (325)
T cd05594 127 LMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-- 202 (325)
T ss_pred EEECCCCCEEEecCCCCeecCCCCc--ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--
Confidence 6788999999999999875422111 122346899999999998888899999999999999999999998643211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
.....+. .... . .+......+.+++.+||+.||.+|+ ++.++++
T Consensus 203 ~~~~~i~---~~~~---------~------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 203 KLFELIL---MEEI---------R------FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHh---cCCC---------C------CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 0111110 0000 0 0112345688899999999999997 8888874
No 217
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.80 E-value=1.5e-19 Score=122.86 Aligned_cols=123 Identities=17% Similarity=0.186 Sum_probs=86.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ ......+++.|++||.+.+..++.++|+||+|++++++++|..||........
T Consensus 146 ili~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~ 223 (297)
T cd06656 146 ILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223 (297)
T ss_pred EEECCCCCEEECcCccceEccCCcc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh
Confidence 5788899999999999877543221 12234578899999998888888999999999999999999999864321110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.. .... .. ......+...+..+.+++.+||..+|++||++.++++
T Consensus 224 ~~-------------~~~~---~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 224 LY-------------LIAT---NG-TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ee-------------eecc---CC-CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0000 00 0000011233456788999999999999999999986
No 218
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.80 E-value=1.8e-19 Score=120.61 Aligned_cols=123 Identities=22% Similarity=0.188 Sum_probs=81.5
Q ss_pred CccCCCCceEEcccccceecCCCC-CcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGD-DSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++...... .........++..|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus 137 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~-- 214 (266)
T cd06651 137 ILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA-- 214 (266)
T ss_pred EEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--
Confidence 578889999999999987653211 11111224578889999998888888999999999999999999999864321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
...+........ .+. .+......+..++ .||..+|++||++.|++.
T Consensus 215 ---~~~~~~~~~~~~----~~~---------~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 215 ---MAAIFKIATQPT----NPQ---------LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---HHHHHHHhcCCC----CCC---------CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 011111000000 000 0112334455555 788899999999999974
No 219
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.80 E-value=3.1e-19 Score=119.04 Aligned_cols=126 Identities=23% Similarity=0.409 Sum_probs=88.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.+......... ......++..|++||++.+..++.++|+||+|++++++++ |..||......
T Consensus 133 i~i~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~- 210 (260)
T cd05073 133 ILVSASLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP- 210 (260)
T ss_pred EEEcCCCcEEECCCcceeeccCCCcc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 46788899999999999765432211 1122335567999999888788889999999999999998 88888643211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
.....+...... +.+...+..+.+++.+||+.+|++||++.++...|+.
T Consensus 211 -~~~~~~~~~~~~-----------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 211 -EVIRALERGYRM-----------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -HHHHHHhCCCCC-----------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111111110000 0111345578899999999999999999999998875
No 220
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.79 E-value=1.5e-19 Score=125.75 Aligned_cols=69 Identities=19% Similarity=0.262 Sum_probs=55.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPT 72 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~ 72 (159)
||++.++.+||+|||+++...... ......||+.|+|||++.+..++.++|+||+|+++++++++..++
T Consensus 188 ill~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 188 IFINDVDQVCIGDLGAAQFPVVAP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred EEECCCCCEEEecCccccccccCc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 578889999999999997542211 122346899999999998888999999999999999999865443
No 221
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.79 E-value=3.1e-19 Score=121.87 Aligned_cols=143 Identities=14% Similarity=0.161 Sum_probs=88.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ......+++.|+|||.+.+ ..++.++|+||+|++++++++|..||......+
T Consensus 135 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 212 (309)
T cd07872 135 LLINERGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED 212 (309)
T ss_pred EEECCCCCEEECccccceecCCCcc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 5788999999999999876532221 1223457889999998765 357889999999999999999999997543221
Q ss_pred ccHHHHHHhhcC----Ccccchh------hhhcccc-c-hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--HHH
Q 035782 80 MSLRDWVNKSLS----GELTQVI------DANLARD-E-QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--KLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~----~~~~~~~------~~~~~~~-~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~l~ 145 (159)
. ...+..... ..+..+. ....... + ............+.+++.+||+.||.+|||+.|++. .++
T Consensus 213 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~ 290 (309)
T cd07872 213 E--LHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFR 290 (309)
T ss_pred H--HHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhh
Confidence 1 000100000 0000000 0000000 0 000011124556789999999999999999999985 444
Q ss_pred HH
Q 035782 146 KI 147 (159)
Q Consensus 146 ~~ 147 (159)
.+
T Consensus 291 ~~ 292 (309)
T cd07872 291 SL 292 (309)
T ss_pred hc
Confidence 43
No 222
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.79 E-value=4.5e-20 Score=127.56 Aligned_cols=117 Identities=20% Similarity=0.174 Sum_probs=84.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++....... ....||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 162 ILl~~~~~ikL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-- 234 (340)
T PTZ00426 162 LLLDKDGFIKMTDFGFAKVVDTRT-----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-- 234 (340)
T ss_pred EEECCCCCEEEecCCCCeecCCCc-----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--
Confidence 678999999999999998763221 2346899999999998888889999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
. ......... .. .+......+.+++.+||+.||.+|+ +++++++
T Consensus 235 ~---~~~~i~~~~--------~~-------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 235 L---IYQKILEGI--------IY-------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred H---HHHHHhcCC--------CC-------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 0 111100000 00 0112344678899999999999995 8888874
No 223
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.79 E-value=9.4e-20 Score=125.49 Aligned_cols=125 Identities=19% Similarity=0.286 Sum_probs=85.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc-
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE- 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~- 79 (159)
||++.++.+||+|||++........ ......||+.|+|||++.+..++.++|+||+|++++++++|..||......+
T Consensus 127 ili~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~ 204 (329)
T cd05588 127 VLLDAEGHIKLTDYGMCKEGIRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN 204 (329)
T ss_pred eEECCCCCEEECcCccccccccCCC--ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccc
Confidence 5788999999999999875321111 1233568999999999988888999999999999999999999996432111
Q ss_pred --ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc------HHHHH
Q 035782 80 --MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY------MTDAA 141 (159)
Q Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt------~~~ll 141 (159)
.....+..+.. ..... ..+......+.+++.+||+.||.+|++ +.+++
T Consensus 205 ~~~~~~~~~~~~~-------~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 205 PDQNTEDYLFQVI-------LEKQI-------RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred ccccchHHHHHHH-------HcCCC-------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 11111111110 00000 011233456889999999999999997 56665
No 224
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.79 E-value=1.3e-19 Score=120.42 Aligned_cols=122 Identities=21% Similarity=0.269 Sum_probs=86.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++++|||.+........ ......|++.|+|||+..+..++.++|+||+|++++++++|..||.....
T Consensus 131 ili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--- 205 (255)
T cd08219 131 IFLTQNGKVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--- 205 (255)
T ss_pred EEECCCCcEEEcccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH---
Confidence 5788899999999999977643221 12234578889999998888888999999999999999999999864321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
.............. .+...+..+.+++.+||+.||++|||+.+++..
T Consensus 206 --~~~~~~~~~~~~~~--------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 206 --KNLILKVCQGSYKP--------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --HHHHHHHhcCCCCC--------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11111100000000 011334568899999999999999999999864
No 225
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.79 E-value=5.2e-19 Score=119.34 Aligned_cols=139 Identities=20% Similarity=0.167 Sum_probs=85.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++....... .......+++.|+|||++.+. .++.++|+||+|++++++++|..||......+
T Consensus 132 il~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~ 209 (285)
T cd07861 132 LLIDNKGVIKLADFGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID 209 (285)
T ss_pred EEEcCCCcEEECcccceeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 578899999999999997653221 122334568889999987654 56888999999999999999999987532211
Q ss_pred ccHHHHHHhhc---CCccc---chhh--hhccc--cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSL---SGELT---QVID--ANLAR--DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~---~~~~~---~~~~--~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
. ......... ...+. .+.+ ..... ..............+.+++.+||+.||++|||+.+++.
T Consensus 210 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 210 Q-LFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred H-HHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 1 000000000 00000 0000 00000 00000001124567789999999999999999999874
No 226
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.79 E-value=4.1e-19 Score=118.79 Aligned_cols=123 Identities=23% Similarity=0.248 Sum_probs=86.0
Q ss_pred CccCCCCceEEcccccceecCCCCCc----ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS----VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
|+++.++.+||+|||.++........ .......|+..|++||.+.+..++.++|+||+|++++++++|..||....
T Consensus 137 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 216 (267)
T cd06628 137 ILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT 216 (267)
T ss_pred EEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc
Confidence 57889999999999998776422111 11122347788999999888788889999999999999999999986532
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.. .. +..... ...+. .+...+..+.+++.+||+.||.+||++.++++
T Consensus 217 ~~----~~-~~~~~~-----~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 217 QL----QA-IFKIGE-----NASPE---------IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HH----HH-HHHHhc-----cCCCc---------CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11 00 000000 00000 11234567889999999999999999999875
No 227
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.79 E-value=3.2e-19 Score=120.35 Aligned_cols=140 Identities=18% Similarity=0.161 Sum_probs=84.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++....... ......++..|+|||.+.+. .++.++|+||+|++++++++|..|+.......
T Consensus 130 il~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~ 207 (284)
T cd07839 130 LLINKNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 207 (284)
T ss_pred EEEcCCCcEEECccchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence 5788899999999999976532221 12234568889999987664 46889999999999999999988853221111
Q ss_pred ccHHHHHHhhcCCc---c---cchhhhh----ccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGE---L---TQVIDAN----LARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~---~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..+........... + ....+.. .................+.+++.+||+.||.+|||+++++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 208 DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 11111100000000 0 0000000 00000000001123467889999999999999999999875
No 228
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.79 E-value=1.6e-19 Score=120.08 Aligned_cols=122 Identities=33% Similarity=0.508 Sum_probs=86.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++...... ......+..|++||...+..++.+.|+||+|++++++++ |..||.......
T Consensus 131 ili~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 205 (254)
T cd05083 131 ILVSEDGVAKVSDFGLARVGSMG-----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE 205 (254)
T ss_pred EEEcCCCcEEECCCccceecccc-----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH
Confidence 57788899999999998764321 111234567999999887788899999999999999997 888886532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
....+.. ..... .+...+..+.+++.+||+.+|.+||++.+++..|++
T Consensus 206 --~~~~~~~------------~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 206 --VKECVEK------------GYRME-----PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --HHHHHhC------------CCCCC-----CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1111110 00000 012345678899999999999999999999988763
No 229
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=1.5e-19 Score=128.22 Aligned_cols=118 Identities=26% Similarity=0.330 Sum_probs=88.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
||+.+.|.|||+|||.+..+.+ .+.++|||.|||||++. .+.|+.++||||+|++.-|+..+++|+-.+
T Consensus 157 ILLse~g~VKLaDFGSAsi~~P------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM-- 228 (948)
T KOG0577|consen 157 ILLSEPGLVKLADFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-- 228 (948)
T ss_pred eEecCCCeeeeccccchhhcCc------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc--
Confidence 7899999999999999987642 33478999999999864 347999999999999999999999885321
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+.++-.-.+.+.-++.++ ..+....+.+++..||+.-|.+|||.+++++
T Consensus 229 NAMSALYHIAQNesPtLq----------------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 229 NAMSALYHIAQNESPTLQ----------------SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred hHHHHHHHHHhcCCCCCC----------------CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 222222222222222111 2356677999999999999999999998874
No 230
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.79 E-value=4.5e-19 Score=117.96 Aligned_cols=121 Identities=22% Similarity=0.310 Sum_probs=86.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ ......+++.|+|||+..+..++.++|+||+|++++++++|..||......
T Consensus 133 il~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-- 208 (257)
T cd08223 133 VFLTRTNIIKVGDLGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN-- 208 (257)
T ss_pred EEEecCCcEEEecccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--
Confidence 5778889999999999987643221 223345788999999988888888999999999999999999998642211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............ . .+...+..+.+++.+||+.+|.+|||+.++++
T Consensus 209 ---~~~~~~~~~~~~--------~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 209 ---SLVYRIIEGKLP--------P------MPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ---HHHHHHHhcCCC--------C------CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 111110110000 0 01234567889999999999999999999885
No 231
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.79 E-value=2.5e-19 Score=120.75 Aligned_cols=122 Identities=22% Similarity=0.262 Sum_probs=83.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC----CccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE----GIVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
|+++.++.+||+|||++....... ..+...++..|++||.+.+ ..++.++|+||+|++++++++|..||....
T Consensus 135 il~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 211 (283)
T cd06617 135 VLINRNGQVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK 211 (283)
T ss_pred EEECCCCCEEEeeccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc
Confidence 578889999999999997653221 1223457888999998754 346788999999999999999999985421
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.......... ... ....+ ....+..+.+++.+||..+|++||++.+++.
T Consensus 212 ~~~~~~~~~~----~~~--------~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 212 TPFQQLKQVV----EEP--------SPQLP-----AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred cCHHHHHHHH----hcC--------CCCCC-----ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1100010000 000 00000 0123457889999999999999999999985
No 232
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.79 E-value=4.5e-19 Score=119.77 Aligned_cols=141 Identities=18% Similarity=0.162 Sum_probs=88.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|++++++.+||+|||++........ .......++..|+|||++.+. .++.++|+||+|++++++++|..||......+
T Consensus 131 i~~~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~ 209 (288)
T cd07833 131 ILVSESGVLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID 209 (288)
T ss_pred eEECCCCCEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5788899999999999877643322 122335678889999998887 78899999999999999999999986432211
Q ss_pred ccHH-HHHHhhcCCcccchh--hhhccc-------cch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLR-DWVNKSLSGELTQVI--DANLAR-------DEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~-~~~~~~~~~~~~~~~--~~~~~~-------~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... ............... ++.... ... ....+...+..+.+++.+||..+|++|||+.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 210 QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 1000 000000000000000 000000 000 00111223677999999999999999999999875
No 233
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.79 E-value=2.4e-19 Score=119.83 Aligned_cols=125 Identities=19% Similarity=0.193 Sum_probs=85.4
Q ss_pred CccCCCCceEEcccccceecCCCCC----cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD----SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
|+++.++.+||+|||++........ ........++..|+|||+..+..++.++|+||+|++++++++|..||....
T Consensus 133 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 212 (265)
T cd06631 133 VMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD 212 (265)
T ss_pred EEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC
Confidence 5778899999999999876421111 111123457889999999988888899999999999999999999986432
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
... ........ .... +. .+......+.+++.+||+.+|++||++.+++.
T Consensus 213 ~~~--~~~~~~~~-~~~~-----~~---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 213 RLA--AMFYIGAH-RGLM-----PR---------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hHH--HHHHhhhc-cCCC-----CC---------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 110 00000000 0000 00 11134556889999999999999999999875
No 234
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.79 E-value=2.5e-19 Score=119.17 Aligned_cols=122 Identities=26% Similarity=0.347 Sum_probs=87.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......+++.|.+||...+..++.++|+||+|++++++++|..||.....
T Consensus 132 i~~~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--- 206 (256)
T cd08221 132 IFLTKAGLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--- 206 (256)
T ss_pred EEEeCCCCEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH---
Confidence 5778889999999999987643321 22335688899999998887788899999999999999999999854221
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
.............. .+...+..+.+++.+||..+|++||++.++++.
T Consensus 207 --~~~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 207 --LNLVVKIVQGNYTP--------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred --HHHHHHHHcCCCCC--------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 11111111111100 012345568889999999999999999999875
No 235
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.79 E-value=1.6e-19 Score=121.85 Aligned_cols=127 Identities=22% Similarity=0.277 Sum_probs=87.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++....... .....|+..|++||++.+..++.++|+||+|++++++++|..||........
T Consensus 135 il~~~~~~~~l~d~gl~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~ 210 (284)
T cd06620 135 ILVNSRGQIKLCDFGVSGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD 210 (284)
T ss_pred EEECCCCcEEEccCCcccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh
Confidence 567888999999999986543211 1234688899999998877888899999999999999999999875432110
Q ss_pred ------cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 81 ------SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 81 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
.......... ...... ......+..+.+++.+||+.||++|||+.|+++..
T Consensus 211 ~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 211 GQDDPMGILDLLQQIV------------QEPPPR-LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhhhhhHHHHHHHHHh------------hccCCC-CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0111111111 000000 00112456788999999999999999999999753
No 236
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.79 E-value=3.6e-19 Score=119.78 Aligned_cols=121 Identities=18% Similarity=0.270 Sum_probs=86.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++++|||++....... .......++..|++||+..+..++.++|+||||++++++++|..|+........
T Consensus 132 i~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~ 209 (277)
T cd06642 132 VLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV 209 (277)
T ss_pred EEEeCCCCEEEccccccccccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH
Confidence 567888999999999987654221 122234578889999998888888899999999999999999999764321110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... ..... +. .....+..+.+++.+||+.+|++||++.++++
T Consensus 210 --~~~~----~~~~~----~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 210 --LFLI----PKNSP----PT---------LEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred --Hhhh----hcCCC----CC---------CCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0000 00000 00 01134567889999999999999999999997
No 237
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.79 E-value=2e-19 Score=122.10 Aligned_cols=124 Identities=25% Similarity=0.256 Sum_probs=83.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc----cccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI----VSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~----~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
|+++.++.+||+|||++..+..... .....++..|+|||.+.+.. ++.++|+||||++++++++|..||....
T Consensus 146 ill~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 222 (296)
T cd06618 146 ILLDASGNVKLCDFGISGRLVDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK 222 (296)
T ss_pred EEEcCCCCEEECccccchhccCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch
Confidence 5788899999999999876532221 12234678899999876543 6788999999999999999999986422
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
... +............ . +.....+..+.+++.+||+.||.+||++.+++..
T Consensus 223 ~~~----~~~~~~~~~~~~~-----~-------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 223 TEF----EVLTKILQEEPPS-----L-------PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred hHH----HHHHHHhcCCCCC-----C-------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 110 1111101000000 0 0001234578999999999999999999999743
No 238
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.79 E-value=3.9e-19 Score=119.98 Aligned_cols=139 Identities=19% Similarity=0.181 Sum_probs=86.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||++........ ......++..|++||++.+. .++.++|+||||++++++++|..||......+
T Consensus 131 i~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~ 208 (286)
T cd07846 131 ILVSQSGVVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID 208 (286)
T ss_pred EEECCCCcEEEEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH
Confidence 5788899999999999877543221 22334578899999987653 46788999999999999999998886432111
Q ss_pred c--cHHHHHHhhcCCcccchh------hhh----ccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 M--SLRDWVNKSLSGELTQVI------DAN----LARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~--~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
. ........ ......... ... ..............+..+.+++.+||+.+|++||++.++++
T Consensus 209 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 209 QLYHIIKCLGN-LIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHHHHHHHhCC-CchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0 00000000 000000000 000 00000011112245677999999999999999999999875
No 239
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.79 E-value=4.5e-19 Score=117.85 Aligned_cols=124 Identities=33% Similarity=0.498 Sum_probs=85.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||++........... ....+++.|++||...+..++.++|+|++|++++++++ |..||.....
T Consensus 134 il~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-- 210 (258)
T smart00219 134 CLVGENLVVKISDFGLSRDLYDDDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-- 210 (258)
T ss_pred EEEccCCeEEEcccCCceeccccccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 5788889999999999987654322211 12236678999999877788899999999999999998 7777754211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
......... ... . ..+...+..+.+++.+||..||.+|||+.++++.|
T Consensus 211 ~~~~~~~~~---~~~--------~------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 211 EEVLEYLKK---GYR--------L------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHhc---CCC--------C------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111111110 000 0 00112456788999999999999999999998764
No 240
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.79 E-value=1.7e-19 Score=121.88 Aligned_cols=123 Identities=20% Similarity=0.219 Sum_probs=85.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||.+....... .......|+..|++||...+..++.++|+||+|++++++++|..||..... .
T Consensus 146 il~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--~ 221 (285)
T cd06648 146 ILLTSDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--L 221 (285)
T ss_pred EEEcCCCcEEEcccccchhhccCC--cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--H
Confidence 578889999999999886543211 112234578899999998887888999999999999999999999854211 0
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............ .. ..+...+..+.+++.+||..+|++||++.++++
T Consensus 222 ~~~~~~~~~~~~--------~~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 222 QAMKRIRDNLPP--------KL-------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHhcCCC--------CC-------cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 000101100000 00 001124467899999999999999999999985
No 241
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.79 E-value=8.9e-19 Score=118.00 Aligned_cols=138 Identities=19% Similarity=0.146 Sum_probs=88.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.+....... .......++..|++||.+.+. .++.++|+||+|++++++++|+.||......+
T Consensus 129 ili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~ 206 (283)
T cd05118 129 LLINTEGVLKLADFGLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID 206 (283)
T ss_pred EEECCCCcEEEeeeeeeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 578888999999999997764332 112224577889999987766 67889999999999999999999986532211
Q ss_pred ccHHHHHHhhcC----Ccccchhh---hhccccc-----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLS----GELTQVID---ANLARDE-----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~----~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
....+..... ..+..+.. ......+ .........+..+.+++..||+.||.+||++++++.
T Consensus 207 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 207 --QLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred --HHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1111111000 00111000 0000000 000112245678999999999999999999999875
No 242
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.79 E-value=4.5e-19 Score=119.66 Aligned_cols=138 Identities=19% Similarity=0.184 Sum_probs=86.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ......++..|++||++.+ ..++.++|+||+|++++++++|..||......+
T Consensus 131 il~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~ 208 (286)
T cd07847 131 ILITKQGQIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD 208 (286)
T ss_pred EEEcCCCcEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 5788899999999999987643321 1222346788999998765 357889999999999999999999997543221
Q ss_pred ccHHHHHHhhcCC---cccchhh------hhccccc----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSG---ELTQVID------ANLARDE----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~---~~~~~~~------~~~~~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
. ...+...... ......+ ....+.+ .........+..+.+++.+||+.+|++||++.+++.
T Consensus 209 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 209 Q--LYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred H--HHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 1 1011100000 0000000 0000000 000001123567889999999999999999999874
No 243
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.79 E-value=4.6e-19 Score=120.60 Aligned_cols=146 Identities=16% Similarity=0.147 Sum_probs=89.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ......+++.|+|||++.+. .++.++|+||+|++++++++|..||......+
T Consensus 135 il~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~ 212 (301)
T cd07873 135 LLINERGELKLADFGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE 212 (301)
T ss_pred EEECCCCcEEECcCcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5788899999999999876432221 12224568899999987654 57788999999999999999999987532211
Q ss_pred ccHHHHHHhhcC----Ccccchhhhh------ccccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--HHH
Q 035782 80 MSLRDWVNKSLS----GELTQVIDAN------LARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--KLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~l~ 145 (159)
....+..... ..+....... ...... ...........+.+++.+|++.||.+|||+.+++. .++
T Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~ 290 (301)
T cd07873 213 --QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290 (301)
T ss_pred --HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 1111111111 1111111100 000000 00001123456789999999999999999999985 554
Q ss_pred HHHHH
Q 035782 146 KIKEK 150 (159)
Q Consensus 146 ~~~~~ 150 (159)
.+.+.
T Consensus 291 ~~~~~ 295 (301)
T cd07873 291 CLGER 295 (301)
T ss_pred cccch
Confidence 44433
No 244
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.79 E-value=6.1e-19 Score=122.54 Aligned_cols=137 Identities=18% Similarity=0.122 Sum_probs=87.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||+++...... ......++..|+|||.+.+..++.++|+||+|++++++++|..||......+
T Consensus 149 il~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~- 224 (353)
T cd07850 149 IVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID- 224 (353)
T ss_pred EEECCCCCEEEccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-
Confidence 578899999999999998753221 1223457889999999988888999999999999999999999986432111
Q ss_pred cHHHHHHhhcCCcc-----------cchhh-----------hhccccchh---hhhchHHHHHHHHHHhhhcCCCCCCCC
Q 035782 81 SLRDWVNKSLSGEL-----------TQVID-----------ANLARDEQS---FFVKMDCLSSIMHLALDCCMESPDQRI 135 (159)
Q Consensus 81 ~~~~~~~~~~~~~~-----------~~~~~-----------~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rp 135 (159)
.+..... ...... ..... ......... .......+..+.+++.+||+.||++||
T Consensus 225 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 303 (353)
T cd07850 225 QWNKIIE-QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRI 303 (353)
T ss_pred HHHHHHH-hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCc
Confidence 0100000 000000 00000 000000000 000113456688999999999999999
Q ss_pred cHHHHHH
Q 035782 136 YMTDAAA 142 (159)
Q Consensus 136 t~~~ll~ 142 (159)
|+.|++.
T Consensus 304 t~~eiL~ 310 (353)
T cd07850 304 SVDDALQ 310 (353)
T ss_pred CHHHHhc
Confidence 9999984
No 245
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.79 E-value=6.2e-20 Score=127.25 Aligned_cols=126 Identities=24% Similarity=0.287 Sum_probs=87.0
Q ss_pred CccCCCCceEEcccccceecCCCC---------------------------CcccccccccccccccccccCCCccccch
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGD---------------------------DSVTQTMTMATIGYMAPEYGSEGIVSTKC 53 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~---------------------------~~~~~~~~~gt~~~~~pe~~~~~~~~~~~ 53 (159)
||++.++.+||+|||++....... .........||+.|+|||++.+..++.++
T Consensus 132 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 211 (350)
T cd05573 132 ILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLEC 211 (350)
T ss_pred eEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCce
Confidence 688999999999999997654322 00112335689999999999888899999
Q ss_pred hhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC
Q 035782 54 DVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ 133 (159)
Q Consensus 54 dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~ 133 (159)
|+||+||+++++++|..||....... ....... .... +. . +.....+..+.+++.+|+. ||.+
T Consensus 212 DiwSlG~il~ell~g~~Pf~~~~~~~-----~~~~i~~-~~~~-----~~-~----p~~~~~~~~~~~li~~ll~-dp~~ 274 (350)
T cd05573 212 DWWSLGVILYEMLYGFPPFYSDTLQE-----TYNKIIN-WKES-----LR-F----PPDPPVSPEAIDLICRLLC-DPED 274 (350)
T ss_pred eeEecchhhhhhccCCCCCCCCCHHH-----HHHHHhc-cCCc-----cc-C----CCCCCCCHHHHHHHHHHcc-Chhh
Confidence 99999999999999999986532111 0110000 0000 00 0 0001135678889999997 9999
Q ss_pred CCc-HHHHHHH
Q 035782 134 RIY-MTDAAAK 143 (159)
Q Consensus 134 Rpt-~~~ll~~ 143 (159)
|++ +.++++.
T Consensus 275 R~~s~~~ll~h 285 (350)
T cd05573 275 RLGSFEEIKSH 285 (350)
T ss_pred cCCCHHHHhcC
Confidence 999 9999863
No 246
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.78 E-value=5.2e-19 Score=120.77 Aligned_cols=136 Identities=18% Similarity=0.242 Sum_probs=86.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||++....... .....++..|++||.+.+..++.++|+||+|++++++++|..||......
T Consensus 131 il~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~-- 204 (308)
T cd06615 131 ILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK-- 204 (308)
T ss_pred EEEecCCcEEEccCCCcccccccc----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--
Confidence 577889999999999987653211 22346788999999988777888999999999999999999998643211
Q ss_pred cHHHHHHhhcCCcc---------------------cchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782 81 SLRDWVNKSLSGEL---------------------TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTD 139 (159)
Q Consensus 81 ~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ 139 (159)
.............. ....+..........+ .......+.+++.+||..+|++|||+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 283 (308)
T cd06615 205 ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP-SGAFSDEFQDFVDKCLKKNPKERADLKE 283 (308)
T ss_pred hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCc-CcccCHHHHHHHHHHccCChhhCcCHHH
Confidence 11111111000000 0000000000000000 0113456889999999999999999999
Q ss_pred HHHH
Q 035782 140 AAAK 143 (159)
Q Consensus 140 ll~~ 143 (159)
+++.
T Consensus 284 ll~~ 287 (308)
T cd06615 284 LTKH 287 (308)
T ss_pred HhcC
Confidence 9865
No 247
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.78 E-value=4e-19 Score=133.55 Aligned_cols=132 Identities=19% Similarity=0.197 Sum_probs=90.1
Q ss_pred CccCCCCceEEcccccceecCCCCC----------------cccccccccccccccccccCCCccccchhhHhHHHHHHH
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD----------------SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLME 64 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~----------------~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~ 64 (159)
||++.++.+||+|||+++....... .......+||+.|+|||+..+..++.++|+||+|+++++
T Consensus 144 ILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyE 223 (932)
T PRK13184 144 ILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQ 223 (932)
T ss_pred EEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHH
Confidence 6788999999999999986521110 001122468999999999988888999999999999999
Q ss_pred HHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-HHHHHHH
Q 035782 65 TFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-MTDAAAK 143 (159)
Q Consensus 65 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-~~~ll~~ 143 (159)
+++|..||........... ... ..+ .........+..+.+++.+||..||++|++ +.++++.
T Consensus 224 LLTG~~PF~~~~~~ki~~~----~~i-------~~P------~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~ 286 (932)
T PRK13184 224 MLTLSFPYRRKKGRKISYR----DVI-------LSP------IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQD 286 (932)
T ss_pred HHHCCCCCCCcchhhhhhh----hhc-------cCh------hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 9999999865221111100 000 000 000001134556888999999999999965 6677777
Q ss_pred HHHHHH
Q 035782 144 LKKIKE 149 (159)
Q Consensus 144 l~~~~~ 149 (159)
|+...+
T Consensus 287 Le~~lq 292 (932)
T PRK13184 287 LEPHLQ 292 (932)
T ss_pred HHHHHh
Confidence 777655
No 248
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.78 E-value=9.4e-20 Score=119.20 Aligned_cols=70 Identities=26% Similarity=0.373 Sum_probs=62.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
||+|.+|.+||+|||+|+..... . . +.||||-|+|||++.+.+|+.++|.|+||+++|||+.|.+||...
T Consensus 175 iLlD~~G~iKitDFGFAK~v~~r--T--~-TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 175 LLLDQNGHIKITDFGFAKRVSGR--T--W-TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred eeeccCCcEEEEeccceEEecCc--E--E-EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 68999999999999999887432 1 2 257999999999999999999999999999999999999999753
No 249
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.78 E-value=1.4e-19 Score=125.03 Aligned_cols=125 Identities=24% Similarity=0.325 Sum_probs=87.4
Q ss_pred CccCCCCceEEcccccceecCCCC---CcccccccccccccccccccCCCc----cccchhhHhHHHHHHHHHhcCCCCc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGD---DSVTQTMTMATIGYMAPEYGSEGI----VSTKCDVYSYGVLLMETFTRKKPTD 73 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~gt~~~~~pe~~~~~~----~~~~~dv~s~g~~~~~~~~~~~p~~ 73 (159)
+|++.+|+|||+|||++..+..+. .........|||.|+|||.+.++. .+.+.|||++|+++|.++.|+.||-
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~ 320 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF 320 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence 588999999999999998763221 111223357999999999887732 3568999999999999999999985
Q ss_pred ccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 74 EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
... ....+.+.+.. +-.++...++.+.+.+|+.++|..||.+|.+..+|...
T Consensus 321 ~~~-----~~~l~~KIvn~-------------pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 321 DDF-----ELELFDKIVND-------------PLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred cch-----HHHHHHHHhcC-------------cccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 421 11111111111 11111122567789999999999999999999988654
No 250
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.78 E-value=9.3e-19 Score=118.12 Aligned_cols=138 Identities=18% Similarity=0.183 Sum_probs=87.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||.+........ .....++..|++||++.+..++.++|+||+|++++++++|..||......+
T Consensus 138 ili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~- 213 (287)
T cd07838 138 ILVTSDGQVKIADFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD- 213 (287)
T ss_pred EEEccCCCEEEeccCcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-
Confidence 5788889999999999977643221 122346788999999888888899999999999999999998886532211
Q ss_pred cHHHHHHhhcCCc---ccchh---hhhccccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGE---LTQVI---DANLARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~---~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............. +.... ......... ...........+.+++.+||+.||++||++.+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 214 QLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 1111111110000 00000 000000000 00111234567889999999999999999999874
No 251
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.78 E-value=8.8e-19 Score=118.01 Aligned_cols=135 Identities=18% Similarity=0.141 Sum_probs=84.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++. +.+||+|||++........ .....++..|++||++.. ..++.++|+||+|++++++++|..||......+
T Consensus 131 i~l~~-~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~ 206 (282)
T cd07831 131 ILIKD-DILKLADFGSCRGIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD 206 (282)
T ss_pred EEEcC-CCeEEEecccccccccCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH
Confidence 46677 9999999999976543221 122457889999997644 456789999999999999999999986532211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccc-------cc-----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLAR-------DE-----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
...............+ ...... .+ .........+..+.+++.+||..+|++||++.+++.
T Consensus 207 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 207 --QIAKIHDVLGTPDAEV-LKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred --HHHHHHHHcCCCCHHH-HHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 1111111111100000 000000 00 000111234678999999999999999999999875
No 252
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.78 E-value=2.5e-19 Score=120.65 Aligned_cols=124 Identities=24% Similarity=0.272 Sum_probs=83.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.++.++|+|||++....... .......+++.|++||.+. +..++.++|+||+|++++++++|..||...
T Consensus 134 ili~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 134 ILLTLDGDVKLADFGVSAKNKSTL--QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred EEECCCCCEEEccCccchhhcccc--cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence 577889999999999986643221 1223345788999999864 334677899999999999999999998653
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
... .......... ......+...+..+.+++.+||+.+|++||++.++++.
T Consensus 212 ~~~-----~~~~~~~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 212 NPM-----RVLLKILKSE------------PPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CHH-----HHHHHHhcCC------------CCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 211 1111100000 00001112344568899999999999999999999853
No 253
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.78 E-value=2e-19 Score=123.77 Aligned_cols=121 Identities=21% Similarity=0.270 Sum_probs=82.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc-c
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG-E 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~-~ 79 (159)
||++.++.+||+|||++........ .....+||+.|+|||++.+..++.++|+||+|++++++++|..||...... .
T Consensus 127 ili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~ 204 (327)
T cd05617 127 VLLDADGHIKLTDYGMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD 204 (327)
T ss_pred EEEeCCCCEEEeccccceeccCCCC--ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc
Confidence 5788999999999999875322111 123356899999999998888899999999999999999999999643221 1
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
........... ...+. ..+...+..+.+++.+||+.||.+|+++
T Consensus 205 ~~~~~~~~~~~------------~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 205 MNTEDYLFQVI------------LEKPI--RIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred cccHHHHHHHH------------HhCCC--CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 11111111100 00000 0111334567889999999999999985
No 254
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=4.5e-19 Score=124.20 Aligned_cols=117 Identities=21% Similarity=0.294 Sum_probs=89.1
Q ss_pred ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
++.+-|-|||+|||++-.+.++. ..++.||+..|-|||++.+..| .+++||||+|+++|-+++|+.||+.....+.
T Consensus 151 FFEKlGlVKLTDFGFSNkf~PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET 227 (864)
T KOG4717|consen 151 FFEKLGLVKLTDFGFSNKFQPGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET 227 (864)
T ss_pred EeeecCceEeeeccccccCCCcc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh
Confidence 45567899999999998876544 3455789999999999999877 4789999999999999999999987543221
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
- ..+.| ..+ ..|......+.+|+..||..||.+|.+.++|.
T Consensus 228 L-------------TmImD-----CKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~ 268 (864)
T KOG4717|consen 228 L-------------TMIMD-----CKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIV 268 (864)
T ss_pred h-------------hhhhc-----ccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence 1 11111 000 01235566789999999999999999999887
No 255
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.78 E-value=3.4e-19 Score=117.89 Aligned_cols=122 Identities=21% Similarity=0.229 Sum_probs=85.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||.+........ .....++..|++||.+.+..++.++|+||+|++++++++|..||.......
T Consensus 129 i~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~- 204 (253)
T cd05122 129 ILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK- 204 (253)
T ss_pred EEEccCCeEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH-
Confidence 5788899999999999877643321 223457888999999887778889999999999999999999986432110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
....... .....+ ......+..+.+++.+||+.||++|||+.+++.
T Consensus 205 -~~~~~~~---~~~~~~------------~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 205 -ALFKIAT---NGPPGL------------RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred -HHHHHHh---cCCCCc------------CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000 000000 001112457889999999999999999999875
No 256
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.78 E-value=6.5e-20 Score=125.87 Aligned_cols=116 Identities=20% Similarity=0.201 Sum_probs=82.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||+++....... ......|++.|+|||++.+..++.++|+||+|++++++++|..||.....
T Consensus 127 Ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--- 201 (321)
T cd05603 127 ILLDSQGHVVLTDFGLCKEGVEPEE--TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--- 201 (321)
T ss_pred eEECCCCCEEEccCCCCccCCCCCC--ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---
Confidence 6789999999999999875322111 22335689999999999888889999999999999999999999865321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
........... + ..+......+.+++.+||+.||.+|+++.
T Consensus 202 --~~~~~~i~~~~--------~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 202 --SQMYDNILHKP--------L-------QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred --HHHHHHHhcCC--------C-------CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11111111000 0 01113345688899999999999999864
No 257
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.78 E-value=6.6e-19 Score=118.43 Aligned_cols=122 Identities=22% Similarity=0.320 Sum_probs=84.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||++........ ......|+..|+|||.+.+. .++.++|+||+|++++++++|..||.......
T Consensus 132 i~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~ 209 (277)
T cd06917 132 ILVTNTGNVKLCDFGVAALLNQNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR 209 (277)
T ss_pred EEEcCCCCEEEccCCceeecCCCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 5788899999999999987653331 12334588899999987654 46789999999999999999999986532111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... ... ...+.+.. ...+..+.+++.+||+.||++||++.+++.
T Consensus 210 -----~~~~-~~~----~~~~~~~~--------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 210 -----AMML-IPK----SKPPRLED--------NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred -----hhhc-ccc----CCCCCCCc--------ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 1100 000 00000100 013457889999999999999999999975
No 258
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.78 E-value=1.9e-19 Score=125.54 Aligned_cols=86 Identities=21% Similarity=0.266 Sum_probs=63.0
Q ss_pred cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc--cHHHHHHhhcCCcccchhhhhccccchhh
Q 035782 32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM--SLRDWVNKSLSGELTQVIDANLARDEQSF 109 (159)
Q Consensus 32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (159)
.+|||-|+|||++.+.+|+...|.||+||++|||+.|.+||....+... .+..|...... +
T Consensus 348 tVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f--------------P--- 410 (550)
T KOG0605|consen 348 TVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF--------------P--- 410 (550)
T ss_pred ccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC--------------C---
Confidence 4699999999999999999999999999999999999999987543221 11122111110 0
Q ss_pred hhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782 110 FVKMDCLSSIMHLALDCCMESPDQRIY 136 (159)
Q Consensus 110 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt 136 (159)
....+..+.++++.+|+. ||.+|.-
T Consensus 411 -~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 411 -EEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred -CcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 011334678899999999 9999965
No 259
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.78 E-value=5.1e-19 Score=118.66 Aligned_cols=128 Identities=24% Similarity=0.332 Sum_probs=84.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc--cccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI--VSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~--~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
|+++.++.++++|||++................++..|++||...... ++.++|+||+|++++++++|..||.....
T Consensus 139 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~- 217 (272)
T cd06629 139 LLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA- 217 (272)
T ss_pred EEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-
Confidence 577889999999999987653221111222345788899999876644 78889999999999999999999853211
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
...... .........+... .....+..+.+++.+||..+|++|||+.++++
T Consensus 218 ---~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 218 ---IAAMFK-LGNKRSAPPIPPD---------VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ---HHHHHH-hhccccCCcCCcc---------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 111110 0000000000000 01134567889999999999999999999875
No 260
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.78 E-value=2.9e-19 Score=130.47 Aligned_cols=132 Identities=21% Similarity=0.355 Sum_probs=102.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
||+.....+||.|||+++.....+.........-.+.|+|-|..+...|+.++|||+||+++||+++ |..|+.++...+
T Consensus 829 VLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e 908 (1177)
T KOG1025|consen 829 VLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE 908 (1177)
T ss_pred eeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH
Confidence 5788889999999999998765554443333334567999999999999999999999999999987 889987654322
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
+.+++. ...+..+|+.+...++-+|.+||..|+..||+++++...+.++.+..
T Consensus 909 --------------I~dlle-----~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 909 --------------IPDLLE-----KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred --------------hhHHHh-----ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 122221 22235567789999999999999999999999999999888876543
No 261
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.78 E-value=7.3e-19 Score=118.83 Aligned_cols=123 Identities=20% Similarity=0.243 Sum_probs=84.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ .....|+..|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus 133 ili~~~~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~- 208 (285)
T cd05632 133 ILLDDYGHIRISDLGLAVKIPEGES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV- 208 (285)
T ss_pred EEECCCCCEEEecCCcceecCCCCc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 5778889999999999876532221 223468899999999988888899999999999999999999986432110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~ 142 (159)
.. ......+...... .+...+..+.+++..||+.||++||+ +.+++.
T Consensus 209 ~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 209 KR-EEVDRRVLETEEV--------------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HH-HHHHHhhhccccc--------------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 00 1111100000000 01123456788999999999999999 667764
No 262
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.78 E-value=3.4e-19 Score=118.54 Aligned_cols=121 Identities=21% Similarity=0.314 Sum_probs=86.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ ......|++.|+|||++.+..++.++|+||||++++++++|..||.....
T Consensus 132 il~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--- 206 (256)
T cd08218 132 IFLTKDGTIKLGDFGIARVLNSTVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--- 206 (256)
T ss_pred EEEcCCCCEEEeeccceeecCcchh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH---
Confidence 5778889999999999977643221 12224578889999998887888899999999999999999999854211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............. ..+......+.+++.+||+.+|++||++.++++
T Consensus 207 --~~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 207 --KNLVLKIIRGSYP--------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --HHHHHHHhcCCCC--------------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1111111111000 011234557889999999999999999999986
No 263
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.78 E-value=6.8e-19 Score=119.43 Aligned_cols=123 Identities=16% Similarity=0.185 Sum_probs=85.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......+++.|++||.+....++.++|+||||++++++++|..||........
T Consensus 146 ili~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~ 223 (293)
T cd06647 146 ILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223 (293)
T ss_pred EEEcCCCCEEEccCcceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh
Confidence 4678889999999999876543222 22334578889999998877788999999999999999999999865322110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.. .... ........+...+..+.+++..||..+|++||++.+++.
T Consensus 224 ~~-------------~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 224 LY-------------LIAT----NGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred ee-------------ehhc----CCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0000 000000111234456888999999999999999999984
No 264
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.78 E-value=4.1e-20 Score=127.07 Aligned_cols=116 Identities=21% Similarity=0.204 Sum_probs=82.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++....... ......|++.|+|||++.+..++.++|+||+|+++++|++|..||......
T Consensus 127 Ill~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-- 202 (325)
T cd05604 127 ILLDSQGHVVLTDFGLCKEGIAQSD--TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-- 202 (325)
T ss_pred eEECCCCCEEEeecCCcccCCCCCC--CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--
Confidence 6889999999999999875322111 223356899999999998888899999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
......... .+. ........+.+++.+|+..+|.+||++.
T Consensus 203 ---~~~~~~~~~--------~~~-------~~~~~~~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 203 ---EMYDNILHK--------PLV-------LRPGASLTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred ---HHHHHHHcC--------Ccc-------CCCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence 111111100 000 0112345678899999999999999875
No 265
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.78 E-value=4.7e-20 Score=126.98 Aligned_cols=124 Identities=20% Similarity=0.298 Sum_probs=84.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC------CCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS------EGIVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~------~~~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
||++.++.+||+|||++......... ......||+.|+|||++. ...++.++|+||+|++++++++|..||..
T Consensus 133 Ill~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 211 (330)
T cd05601 133 VLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE 211 (330)
T ss_pred eEECCCCCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence 67899999999999999876433222 222346899999999876 34567889999999999999999999865
Q ss_pred cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... ......... ...+ . .+........+.+++..|+. +|.+|||+.+++.
T Consensus 212 ~~~~-----~~~~~i~~~--~~~~-----~----~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 212 GTSA-----KTYNNIMNF--QRFL-----K----FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCHH-----HHHHHHHcC--CCcc-----C----CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 3211 111110000 0000 0 00011234567889999997 9999999999884
No 266
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.78 E-value=1.1e-18 Score=120.58 Aligned_cols=141 Identities=19% Similarity=0.194 Sum_probs=86.7
Q ss_pred CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
|+++.++.+||+|||++......... .......|+..|+|||++.+ ..++.++|+||+|++++++++|..||......
T Consensus 137 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~ 216 (336)
T cd07849 137 LLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL 216 (336)
T ss_pred EEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 57888999999999998765332211 11223467889999998654 46788999999999999999999998643211
Q ss_pred cccHHHHHHhhcCC----cccchhhhh----ccccc--hhh---hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 79 EMSLRDWVNKSLSG----ELTQVIDAN----LARDE--QSF---FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 79 ~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~--~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
............ .+..+.... +...+ ... .........+.+++.+||+.+|.+|||+.+++..
T Consensus 217 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 217 --HQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred --HHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111111110 001000000 00000 000 0001234568899999999999999999999864
No 267
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.78 E-value=5.2e-19 Score=119.57 Aligned_cols=123 Identities=21% Similarity=0.290 Sum_probs=85.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ .....|+..|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus 133 il~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~- 208 (285)
T cd05630 133 ILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI- 208 (285)
T ss_pred EEECCCCCEEEeeccceeecCCCcc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-
Confidence 5788889999999999876532221 123468899999999988888999999999999999999999997532110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~ 142 (159)
.... ...... .... ..+......+.+++..||+.||.+||| +.++++
T Consensus 209 ~~~~-~~~~~~-~~~~-------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 209 KREE-VERLVK-EVQE-------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hHHH-HHhhhh-hhhh-------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0000 000000 0000 001133456789999999999999999 788885
No 268
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.78 E-value=1.2e-18 Score=118.01 Aligned_cols=139 Identities=16% Similarity=0.133 Sum_probs=84.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++....... ......+++.|+|||...+. .++.++|+||+|++++++++|..||.......
T Consensus 134 il~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~ 211 (291)
T cd07870 134 LLISYLGELKLADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF 211 (291)
T ss_pred EEEcCCCcEEEeccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH
Confidence 5788899999999999876432221 12234568889999987653 56788999999999999999999987533211
Q ss_pred ccHHHHHHhhcC--------------CcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLS--------------GELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..+... ..... ...........................+.+++.+|+..||++|||+.+++.
T Consensus 212 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 212 EQLEKI-WTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HHHHHH-HHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 111110 00000 000000000000000000000112456788999999999999999999874
No 269
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.78 E-value=7.8e-19 Score=119.83 Aligned_cols=118 Identities=25% Similarity=0.282 Sum_probs=82.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++...... ....+++.|+|||++. ...++.++|+||||++++++++|..||.....
T Consensus 146 Il~~~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~ 219 (307)
T cd06607 146 ILLTEPGTVKLADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (307)
T ss_pred EEECCCCCEEEeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH
Confidence 57888999999999998765322 1245778899999864 34577899999999999999999999854321
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.. ....+.. .... .......+..+.+++.+||..+|++||++.+++.
T Consensus 220 ~~--~~~~~~~---~~~~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 220 MS--ALYHIAQ---NDSP-------------TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred HH--HHHHHhc---CCCC-------------CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 11 0000000 0000 0001134567899999999999999999999986
No 270
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.78 E-value=1.1e-18 Score=119.06 Aligned_cols=142 Identities=18% Similarity=0.195 Sum_probs=84.9
Q ss_pred CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++..+...... .......++..|+|||.+.+. .++.++|+||+|++++++++|..||.....
T Consensus 150 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~ 229 (310)
T cd07865 150 ILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE 229 (310)
T ss_pred EEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 57888999999999999876432211 112234567889999987654 467889999999999999999999865322
Q ss_pred cc-ccHHHHHHhhcCCcc-cch-----hhhhccccc-----hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GE-MSLRDWVNKSLSGEL-TQV-----IDANLARDE-----QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~-~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.. ......+....+... ... .+....+.. .....+......+.+++.+||..||.+|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 230 QHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 11 011111111111000 000 000000000 000001112345678999999999999999999874
No 271
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.77 E-value=3.4e-20 Score=127.09 Aligned_cols=117 Identities=26% Similarity=0.266 Sum_probs=82.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++........ ......|++.|+|||.+.+..++.++|+||+|++++++++|..||......
T Consensus 129 il~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-- 204 (318)
T cd05582 129 ILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-- 204 (318)
T ss_pred eEECCCCcEEEeeccCCcccCCCCC--ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--
Confidence 6788999999999999876533211 122356899999999998888889999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTD 139 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ 139 (159)
.......... . ..+......+.+++.+||+.||.+||++.+
T Consensus 205 ---~~~~~i~~~~--------~-------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 205 ---ETMTMILKAK--------L-------GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred ---HHHHHHHcCC--------C-------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1111100000 0 001123456788999999999999999443
No 272
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.77 E-value=1.2e-18 Score=116.62 Aligned_cols=123 Identities=24% Similarity=0.324 Sum_probs=81.9
Q ss_pred CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++. ++.+||+|||++........ ......+++.|++||++... .++.++|+||+|++++++++|..||.....
T Consensus 139 il~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~ 216 (268)
T cd06624 139 VLVNTYSGVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE 216 (268)
T ss_pred EEEcCCCCeEEEecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence 46654 67899999999876532221 12223478899999987654 377899999999999999999999864321
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..... +... ...... ..+......+.+++.+||+.+|++|||+.+++.
T Consensus 217 ~~~~~--~~~~-------------~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 217 PQAAM--FKVG-------------MFKIHP--EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hhhhH--hhhh-------------hhccCC--CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 11100 0000 000000 011234556889999999999999999999875
No 273
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.77 E-value=8.5e-20 Score=138.06 Aligned_cols=125 Identities=22% Similarity=0.250 Sum_probs=88.8
Q ss_pred CccCCCCceEEcccccceecCCCCCccc--ccccccccccccccccCCC---ccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVT--QTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.+|.+|++|||.|..+.++..... .....||+-|||||++.+. +...+.||||+||++.||++|+.||...
T Consensus 1365 I~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1365 ILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL 1444 (1509)
T ss_pred eeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhc
Confidence 6889999999999999998765432211 2345799999999987654 4668899999999999999999999764
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
..+ ....-.....- .|+ .|........+++.+|+..||.+|.++.|++..
T Consensus 1445 dne-~aIMy~V~~gh--------------~Pq---~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1445 DNE-WAIMYHVAAGH--------------KPQ---IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred cch-hHHHhHHhccC--------------CCC---CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 321 11111111111 010 122355678889999999999999999887753
No 274
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.77 E-value=1.1e-18 Score=117.60 Aligned_cols=121 Identities=18% Similarity=0.241 Sum_probs=84.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||++.++.++|+|||++....... .....|+..|+|||...+ ..++.++|+||+|++++++++|..||.......
T Consensus 128 il~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 203 (279)
T cd05633 128 ILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 203 (279)
T ss_pred EEECCCCCEEEccCCcceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC
Confidence 578889999999999987653221 122458899999998753 457889999999999999999999986532221
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
... ....... ... ..+...+..+.+++.+||+.||++|+ |+.++++
T Consensus 204 ~~~---~~~~~~~---------~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 204 KHE---IDRMTLT---------VNV-----ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred HHH---HHHHhhc---------CCc-----CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 111 1110000 000 01123456788999999999999999 5888875
No 275
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.77 E-value=1.2e-18 Score=117.65 Aligned_cols=139 Identities=22% Similarity=0.190 Sum_probs=84.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc-cccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ......++..|+|||.+.+.. ++.++|+||+|++++++++|..||......+
T Consensus 131 ill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~ 208 (284)
T cd07860 131 LLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 208 (284)
T ss_pred EEECCCCCEEEeeccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 5788999999999999876532221 122234678899999876544 5788999999999999999999986432111
Q ss_pred ccHHHHHHhhcCCc------ccchhh--hhc-cccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGE------LTQVID--ANL-ARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~------~~~~~~--~~~-~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............. ...+.. ... ..... ...........+.+++.+||+.||++|||+.++++
T Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 209 -QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred -HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 1111111000000 000000 000 00000 00001123456788999999999999999999874
No 276
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.77 E-value=2.3e-18 Score=114.88 Aligned_cols=124 Identities=22% Similarity=0.281 Sum_probs=88.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++......... .....++..|++||...+..++.++|+|+||++++++++|..||..... .
T Consensus 131 i~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~ 206 (264)
T cd06623 131 LLINSKGEVKIADFGISKVLENTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--P 206 (264)
T ss_pred EEECCCCCEEEccCccceecccCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--c
Confidence 57888999999999999876432221 1234577889999998888888999999999999999999999865432 0
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchH-HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMD-CLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
...+........... . .+.. .+..+.+++..||..+|++||++.+++.
T Consensus 207 ~~~~~~~~~~~~~~~--------~------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 207 SFFELMQAICDGPPP--------S------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred CHHHHHHHHhcCCCC--------C------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 111111111100000 0 0112 4568999999999999999999999986
No 277
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.77 E-value=7e-19 Score=124.90 Aligned_cols=116 Identities=22% Similarity=0.210 Sum_probs=87.1
Q ss_pred Ccc-CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILL-DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||+ +..++++|+|||.++..... ..+.+-|..|.|||++....|+.++|+||+|+++|+|++|+.||+....+
T Consensus 446 IL~~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~- 519 (612)
T KOG0603|consen 446 ILLDGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG- 519 (612)
T ss_pred eeecCCCCcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-
Confidence 678 68899999999999876432 22244577899999999889999999999999999999999999865433
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.+...+...+... ........+|+.+||+.||.+|+++.++..
T Consensus 520 ---~ei~~~i~~~~~s-----------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 520 ---IEIHTRIQMPKFS-----------------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ---HHHHHhhcCCccc-----------------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 1111111111111 134556788999999999999999999874
No 278
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.77 E-value=1.7e-19 Score=122.20 Aligned_cols=67 Identities=30% Similarity=0.442 Sum_probs=58.2
Q ss_pred CceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 7 MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 7 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
-.+||+|||+|+.+.++. ...+.+||+.|||||++...+|+.++|+||.|+++|++++|+.||....
T Consensus 152 ~~LKIADFGfAR~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 152 PVLKIADFGFARFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred ceEEecccchhhhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 568999999999985333 3345789999999999999999999999999999999999999997543
No 279
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.77 E-value=2e-18 Score=114.73 Aligned_cols=120 Identities=27% Similarity=0.398 Sum_probs=83.6
Q ss_pred CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++. ++.+||+|||++........ .....++..|++||.+.+..++.++|+||+|++++++++|..||......
T Consensus 132 il~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~- 207 (256)
T cd08220 132 ILLDKHKMVVKIGDFGISKILSSKSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP- 207 (256)
T ss_pred EEEcCCCCEEEEccCCCceecCCCcc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-
Confidence 45653 45689999999987643322 12245788999999998878888999999999999999999998643211
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............. .+...+..+.+++.+||+.+|++|||+.+++.
T Consensus 208 ----~~~~~~~~~~~~~--------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 208 ----ALVLKIMSGTFAP--------------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ----HHHHHHHhcCCCC--------------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1111100000000 01124557889999999999999999999985
No 280
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.77 E-value=4.2e-19 Score=121.99 Aligned_cols=115 Identities=21% Similarity=0.252 Sum_probs=81.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|++++++++|..||......
T Consensus 132 ill~~~~~ikL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-- 207 (323)
T cd05615 132 VMLDSEGHIKIADFGMCKEHMVDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-- 207 (323)
T ss_pred eEECCCCCEEEeccccccccCCCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--
Confidence 6789999999999999875432211 122345899999999988888899999999999999999999998653211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
.....+.. .. .. .+......+.+++.+||+.+|++|++.
T Consensus 208 ~~~~~i~~---~~--------~~-------~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 208 ELFQSIME---HN--------VS-------YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHHHh---CC--------CC-------CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 11111100 00 00 011234567889999999999999985
No 281
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=5e-19 Score=117.78 Aligned_cols=114 Identities=19% Similarity=0.199 Sum_probs=81.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
+|+|++|++||+|||+|+.--. ......+.||||.|+|||++-...|..++|.|++|+++|||++|+.||.....+..
T Consensus 299 LlLDkDGHIKitDFGLCKE~I~--~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL 376 (516)
T KOG0690|consen 299 LLLDKDGHIKITDFGLCKEEIK--YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL 376 (516)
T ss_pred heeccCCceEeeecccchhccc--ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH
Confidence 4789999999999999976321 12234458999999999999999999999999999999999999999975432211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY 136 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt 136 (159)
.+.+-. .. .+.+ ....+....|+...+..||.+|.-
T Consensus 377 --FeLIl~-----------ed-~kFP------r~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 377 --FELILM-----------ED-LKFP------RTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred --HHHHHh-----------hh-ccCC------ccCCHHHHHHHHHHhhcChHhhcC
Confidence 111100 00 0111 123345667788888899999853
No 282
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.77 E-value=6.7e-19 Score=120.03 Aligned_cols=127 Identities=17% Similarity=0.114 Sum_probs=82.2
Q ss_pred CccCCCCceEEcccccceecCCCCC-------------cccccccccccccccccccCCCccccchhhHhHHHHHHHHHh
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD-------------SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 67 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~ 67 (159)
|+++.++.+||+|||+++....... ........++..|+|||.+....++.++|+||||++++++++
T Consensus 132 Ill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~ 211 (305)
T cd05609 132 LLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV 211 (305)
T ss_pred EEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHh
Confidence 5788899999999999864211000 001112346778999999888788899999999999999999
Q ss_pred cCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 68 RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 68 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
|..||...... +........... .+ . .....+..+.+++.+||+.||++||++.++++.|
T Consensus 212 g~~pf~~~~~~-----~~~~~~~~~~~~---~~------~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 212 GCVPFFGDTPE-----ELFGQVISDDIE---WP------E---GDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred CCCCCCCCCHH-----HHHHHHHhcccC---CC------C---ccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 99998642211 111111100000 00 0 0012345688999999999999999965444433
No 283
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.77 E-value=2.5e-18 Score=116.17 Aligned_cols=122 Identities=18% Similarity=0.267 Sum_probs=83.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC------ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG------IVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
|+++.++.+||+|||++..+.... .....+++.|++||.+.+. .++.++|+||+|++++++++|..||..
T Consensus 134 il~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 134 VLVNGNGQVKLCDFGVSGNLVASL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209 (286)
T ss_pred EEECCCCCEEEeecCCcccccCCc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 577888999999999987653221 2224578889999987543 247789999999999999999999864
Q ss_pred cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..... .......... ..+. ..+......+.+++.+||+.+|++||++.+++.
T Consensus 210 ~~~~~--~~~~~~~~~~------------~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 210 ETYAN--IFAQLSAIVD------------GDPP--TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred cchhh--HHHHHHHHhh------------cCCC--CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 32111 1010100000 0000 011235567889999999999999999999986
No 284
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.77 E-value=1e-18 Score=120.73 Aligned_cols=141 Identities=19% Similarity=0.188 Sum_probs=87.6
Q ss_pred CccCCCCceEEcccccceecCCCCCc---ccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS---VTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
|+++.++.+||+|||++......... .......|+..|++||++.+ ..++.++|+||||++++++++|+.||....
T Consensus 138 ill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~ 217 (337)
T cd07852 138 ILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTS 217 (337)
T ss_pred EEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 57889999999999999765432221 12233468889999998754 356788999999999999999999986432
Q ss_pred cccccHHHHHHhhcCC------------cccchhhhhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSG------------ELTQVIDANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
..+. ...+...... ....+++........ ........+..+.+++.+||+.||++|||+.++++.
T Consensus 218 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 218 TLNQ--LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hHHH--HHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 2111 0000000000 000011100000000 000011245678999999999999999999999953
No 285
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.77 E-value=6.1e-19 Score=120.40 Aligned_cols=117 Identities=24% Similarity=0.254 Sum_probs=89.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||+|.++.+||+|||++-.+.... ...++||+|-|.+||++.+.+| .+.+|.||+|+++|.++.|..||.+...
T Consensus 184 ILLD~N~NiKIADFGLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-- 258 (668)
T KOG0611|consen 184 ILLDQNNNIKIADFGLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-- 258 (668)
T ss_pred eeecCCCCeeeeccchhhhhcccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--
Confidence 799999999999999998775333 3556899999999999999987 4679999999999999999999976321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
+.++.+.-.+..... ..+....-|+++||..||++|-|++++-
T Consensus 259 ---------------k~lvrQIs~GaYrEP----~~PSdA~gLIRwmLmVNP~RRATieDiA 301 (668)
T KOG0611|consen 259 ---------------KRLVRQISRGAYREP----ETPSDASGLIRWMLMVNPERRATIEDIA 301 (668)
T ss_pred ---------------HHHHHHhhcccccCC----CCCchHHHHHHHHHhcCcccchhHHHHh
Confidence 222222222222111 2234566789999999999999999875
No 286
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.77 E-value=1.1e-18 Score=118.42 Aligned_cols=123 Identities=20% Similarity=0.233 Sum_probs=85.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ ......++..|++||...+..++.++|+||+|++++++++|..||..... .
T Consensus 147 ilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~ 222 (292)
T cd06657 147 ILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--L 222 (292)
T ss_pred EEECCCCCEEEcccccceecccccc--cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H
Confidence 5788899999999999876543221 12234578889999988777788899999999999999999999864211 1
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..........+.... .....+..+.+++.+||+.+|.+||++.+++.
T Consensus 223 ~~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 223 KAMKMIRDNLPPKLK---------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHhhCCcccC---------------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 111111111111100 01123456788999999999999999999886
No 287
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.77 E-value=4.1e-19 Score=124.09 Aligned_cols=125 Identities=19% Similarity=0.245 Sum_probs=85.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC----ccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
||++.++.+||+|||++........ .......||+.|+|||++.+. .++.++|+||+|++++++++|..||....
T Consensus 173 ILl~~~~~~kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 251 (370)
T cd05596 173 MLLDKSGHLKLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (370)
T ss_pred EEEcCCCCEEEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC
Confidence 6889999999999999987643221 122345689999999987653 36789999999999999999999986532
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAA 142 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~ 142 (159)
.. ..+....... .. +. .+.....+..+.+++.+|+..+|.+ |+++.++++
T Consensus 252 ~~-----~~~~~i~~~~-~~-----~~-----~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 252 LV-----GTYSKIMDHK-NS-----LT-----FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred HH-----HHHHHHHcCC-Cc-----CC-----CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 11 1111110000 00 00 0001124567888999999999987 999999974
No 288
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.76 E-value=5.6e-19 Score=121.58 Aligned_cols=118 Identities=23% Similarity=0.310 Sum_probs=83.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||+|+.|+++|+|+|+|..+..+.. ....+||.+|||||++.++.|+.+.|.|++||++|+|+.|..||..-..-..
T Consensus 318 ILLDd~GhvRISDLGLAvei~~g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk 394 (591)
T KOG0986|consen 318 ILLDDHGHVRISDLGLAVEIPEGKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK 394 (591)
T ss_pred eeeccCCCeEeeccceEEecCCCCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh
Confidence 7999999999999999998864432 3334799999999999999999999999999999999999999864321110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
++=++.+....+.. .+..-.+....+....|..||.+|.-+
T Consensus 395 --------------~eEvdrr~~~~~~e--y~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 395 --------------REEVDRRTLEDPEE--YSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred --------------HHHHHHHHhcchhh--cccccCHHHHHHHHHHHccCHHHhccC
Confidence 00111111111110 112334566777888888899888654
No 289
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.76 E-value=1.9e-18 Score=119.18 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=87.3
Q ss_pred CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++......... .......++..|++||.+.+ ..++.++|+||+|++++++++|..||.....
T Consensus 138 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 138 LLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred EEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 57889999999999999775432211 11123467889999998755 3578899999999999999999999865322
Q ss_pred ccccHHHHHHhhcCCcccch--------hhhhccccchh-----hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQV--------IDANLARDEQS-----FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.. ....+..........+ +.......+.. .......+..+.+++.+||+.+|.+|||+++++.
T Consensus 218 ~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 218 VH--QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HH--HHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11 0011110000000000 00000000000 0011234677999999999999999999999885
No 290
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.76 E-value=1.2e-18 Score=120.45 Aligned_cols=146 Identities=20% Similarity=0.195 Sum_probs=90.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ......++..|+|||.+.. ..++.++|+||+|++++++++|..||......
T Consensus 139 il~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~- 215 (337)
T cd07858 139 LLLNANCDLKICDFGLARTTSEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV- 215 (337)
T ss_pred EEEcCCCCEEECcCccccccCCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-
Confidence 5778899999999999976543221 1223457888999998754 45788999999999999999999998643211
Q ss_pred ccHHHHHHhhcC------------Ccccchhhhhcc-ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH--H
Q 035782 80 MSLRDWVNKSLS------------GELTQVIDANLA-RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK--L 144 (159)
Q Consensus 80 ~~~~~~~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~--l 144 (159)
.....+..... ......+..... ...............+.+++.+||+.+|++|||+.++++. +
T Consensus 216 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~ 294 (337)
T cd07858 216 -HQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL 294 (337)
T ss_pred -HHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcch
Confidence 00111110000 000000000000 0000011112356678999999999999999999999854 6
Q ss_pred HHHHHH
Q 035782 145 KKIKEK 150 (159)
Q Consensus 145 ~~~~~~ 150 (159)
..+...
T Consensus 295 ~~~~~~ 300 (337)
T cd07858 295 ASLHDP 300 (337)
T ss_pred hhhcCc
Confidence 554433
No 291
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.76 E-value=2.1e-18 Score=115.11 Aligned_cols=126 Identities=22% Similarity=0.303 Sum_probs=84.9
Q ss_pred CccCCCCceEEcccccceecCCCCCccc--ccccccccccccccccCCCc---cccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVT--QTMTMATIGYMAPEYGSEGI---VSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~gt~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
|+++.++.+||+|||++........... .....++..|++||++.+.. .+.++|+|+||++++++++|..||...
T Consensus 130 il~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 130 IFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred EEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 5788899999999999877643222111 11245678899999987655 788999999999999999999998653
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
... ......... .. ....+........+.+++.+||+.+|.+|||+.+++.
T Consensus 210 ~~~-~~~~~~~~~---~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 210 DNE-FQIMFHVGA---GH------------KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred cch-HHHHHHHhc---CC------------CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 211 111000000 00 0000001123556788999999999999999999874
No 292
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.76 E-value=1.1e-18 Score=124.04 Aligned_cols=64 Identities=27% Similarity=0.177 Sum_probs=54.9
Q ss_pred CceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 7 MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 7 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
..+||+|||.++....... ..+.+..|+|||++.+.+|+.+.|+|||||++.||++|.+.|.+.
T Consensus 328 ~~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 328 SRIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CceeEEecccccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 4789999999988643222 356788999999999999999999999999999999998888753
No 293
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.76 E-value=2e-18 Score=115.73 Aligned_cols=120 Identities=19% Similarity=0.247 Sum_probs=85.2
Q ss_pred CccCCCC-ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++ .++|+|||++....... ...++..|+|||++.+..++.++|+||+|++++++++|..||.......
T Consensus 140 il~~~~~~~~~l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~ 213 (267)
T PHA03390 140 VLYDRAKDRIYLCDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE 213 (267)
T ss_pred EEEeCCCCeEEEecCccceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch
Confidence 4667777 99999999987654221 2347889999999988888899999999999999999999997543322
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-HHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-MTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-~~~ll~ 142 (159)
.....+.... ... . ..+......+.+++.+||+.+|.+||+ ++++++
T Consensus 214 ~~~~~~~~~~-~~~--------~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 214 LDLESLLKRQ-QKK--------L-------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred hhHHHHHHhh-ccc--------C-------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 2222221111 000 0 011135567899999999999999996 588873
No 294
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.76 E-value=2.5e-18 Score=117.40 Aligned_cols=138 Identities=20% Similarity=0.179 Sum_probs=85.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ..+...++..|+|||.+.+ ..++.++|+||+|++++++++|..||.....
T Consensus 139 il~~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~-- 214 (309)
T cd07845 139 LLLTDKGCLKIADFGLARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE-- 214 (309)
T ss_pred EEECCCCCEEECccceeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--
Confidence 5788899999999999987643221 1222345778999998765 3578899999999999999999999864321
Q ss_pred ccHHHHHHhhcCCc----ccchhh------hhccccc--hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGE----LTQVID------ANLARDE--QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~----~~~~~~------~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......+....... +..+.. ..+.... ..........+.+.+++.+||+.||.+|||+.+++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 215 IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred HHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 11111111111100 000000 0000000 000001113556788999999999999999999985
No 295
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.76 E-value=2.1e-18 Score=114.78 Aligned_cols=118 Identities=19% Similarity=0.265 Sum_probs=80.8
Q ss_pred CccCCCC-------ceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHh-cCC
Q 035782 1 ILLDEDM-------VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFT-RKK 70 (159)
Q Consensus 1 ili~~~~-------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~-~~~ 70 (159)
|+++.++ .+||+|||++..... .....++..|++||++.+. .++.++|+||+|++++++++ +..
T Consensus 132 ill~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~ 205 (259)
T cd05037 132 ILVARYGLNEGYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEE 205 (259)
T ss_pred EEEecCccccCCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCC
Confidence 4566666 799999999876532 1123456789999998776 67889999999999999998 466
Q ss_pred CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
||...... ....+.. .. ...+. .....+.+++.+||..+|++|||+.++++.|+
T Consensus 206 p~~~~~~~--~~~~~~~---~~--------~~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 206 PLSTLSSS--EKERFYQ---DQ--------HRLPM--------PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CcccCCch--hHHHHHh---cC--------CCCCC--------CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 66543211 1111110 00 00000 01157889999999999999999999998763
No 296
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.76 E-value=9.9e-19 Score=118.14 Aligned_cols=123 Identities=19% Similarity=0.243 Sum_probs=85.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ ......++..|++||++.+..++.++|+||+|++++++++|..||.......
T Consensus 147 i~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~- 223 (286)
T cd06614 147 ILLSKDGSVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR- 223 (286)
T ss_pred EEEcCCCCEEECccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 5788899999999999865532211 1223457788999999887788899999999999999999999986422110
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... .. ... . .....+...+..+.+++..||+.+|.+||++.+++.
T Consensus 224 ~~~~-~~---~~~--------~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 224 ALFL-IT---TKG--------I----PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHH-HH---hcC--------C----CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0000 00 000 0 000011124567889999999999999999999984
No 297
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.76 E-value=3.1e-18 Score=117.16 Aligned_cols=141 Identities=18% Similarity=0.180 Sum_probs=85.9
Q ss_pred CccCCCCceEEcccccceecCCCCCc-----ccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS-----VTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTD 73 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~ 73 (159)
|+++.++.+|++|||.+......... .......++..|+|||++... .++.++|+||+|++++++++|..||.
T Consensus 132 ili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~ 211 (314)
T cd08216 132 ILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFK 211 (314)
T ss_pred EEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 57888899999999998765322211 111223467789999987653 57889999999999999999999997
Q ss_pred ccccccccHHHHHHhhcCCcc------------cchhhhhc---cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 74 EMFIGEMSLRDWVNKSLSGEL------------TQVIDANL---ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
........ .+.........+ ........ ................+.+++..||..||++|||+.
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 290 (314)
T cd08216 212 DMPATQML-LEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSAS 290 (314)
T ss_pred CCCHHHHH-HHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHH
Confidence 53221111 111110000000 00000000 000011111223345788899999999999999999
Q ss_pred HHHH
Q 035782 139 DAAA 142 (159)
Q Consensus 139 ~ll~ 142 (159)
+++.
T Consensus 291 ~ll~ 294 (314)
T cd08216 291 QLLN 294 (314)
T ss_pred HHhc
Confidence 9984
No 298
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.76 E-value=8.8e-20 Score=118.02 Aligned_cols=123 Identities=24% Similarity=0.309 Sum_probs=88.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
||++..|.+||||||.+..+. .+...+.-.|-..|+|||.+... +|..++||||+|++++|+.+|..|+.....
T Consensus 199 ILldr~G~vKLCDFGIcGqLv---~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s- 274 (361)
T KOG1006|consen 199 ILLDRHGDVKLCDFGICGQLV---DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS- 274 (361)
T ss_pred eEEecCCCEeeecccchHhHH---HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-
Confidence 789999999999999987653 23334445678899999976543 588999999999999999999999765321
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhch---HHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKM---DCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..+.+.+.+.++... ...+. +....+...+..|+-.|-+.||...++++
T Consensus 275 ---vfeql~~Vv~gdpp~------------l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 275 ---VFEQLCQVVIGDPPI------------LLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ---HHHHHHHHHcCCCCe------------ecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 222222222222221 11112 24456888999999999999999998874
No 299
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.76 E-value=4.1e-18 Score=117.31 Aligned_cols=148 Identities=18% Similarity=0.193 Sum_probs=93.8
Q ss_pred CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
|+++.++.++|+|||.+......... .......++..|++||.+.+. .++.++|+||+|++++++++|..||......
T Consensus 134 ili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~ 213 (330)
T cd07834 134 ILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI 213 (330)
T ss_pred EEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH
Confidence 57888999999999999876543210 112334578889999998877 7888999999999999999999998754321
Q ss_pred cccHHHHHHhhcC------------Ccccchhhhhccccc-hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH--H
Q 035782 79 EMSLRDWVNKSLS------------GELTQVIDANLARDE-QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA--K 143 (159)
Q Consensus 79 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~--~ 143 (159)
. ....+..... ......+........ .........+..+.+++.+||+.+|.+|||+.+++. .
T Consensus 214 ~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 291 (330)
T cd07834 214 D--QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY 291 (330)
T ss_pred H--HHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence 1 1111111000 000001100000000 000111224567899999999999999999999996 4
Q ss_pred HHHHHHH
Q 035782 144 LKKIKEK 150 (159)
Q Consensus 144 l~~~~~~ 150 (159)
++++...
T Consensus 292 ~~~~~~~ 298 (330)
T cd07834 292 LAQLHDP 298 (330)
T ss_pred HHhhccc
Confidence 6655543
No 300
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.76 E-value=6.9e-19 Score=120.35 Aligned_cols=142 Identities=17% Similarity=0.109 Sum_probs=86.2
Q ss_pred CccCC----CCceEEcccccceecCCCCC-cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDE----DMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~----~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
|+++. ++.+||+|||++........ ........++..|+|||+..+. .++.++|+||+|++++++++|..||..
T Consensus 139 il~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 218 (316)
T cd07842 139 ILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKG 218 (316)
T ss_pred EEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence 46777 89999999999987643222 1122334578889999987654 578899999999999999999999875
Q ss_pred cccccc--------cHHHHHHhhcC------------Ccccchhhhhc-cccc----hh-hhhchHHHHHHHHHHhhhcC
Q 035782 75 MFIGEM--------SLRDWVNKSLS------------GELTQVIDANL-ARDE----QS-FFVKMDCLSSIMHLALDCCM 128 (159)
Q Consensus 75 ~~~~~~--------~~~~~~~~~~~------------~~~~~~~~~~~-~~~~----~~-~~~~~~~~~~~~~l~~~cl~ 128 (159)
...... ........... .......+... .... .. ..........+.+++.+||+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 298 (316)
T cd07842 219 REAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLE 298 (316)
T ss_pred CcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhc
Confidence 432220 00000000000 00000000000 0000 00 00001234568899999999
Q ss_pred CCCCCCCcHHHHHH
Q 035782 129 ESPDQRIYMTDAAA 142 (159)
Q Consensus 129 ~~p~~Rpt~~~ll~ 142 (159)
.||.+|||+.+++.
T Consensus 299 ~~P~~Rps~~eil~ 312 (316)
T cd07842 299 YDPTKRITAEEALE 312 (316)
T ss_pred CCcccCcCHHHHhc
Confidence 99999999999874
No 301
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.76 E-value=1.8e-18 Score=115.64 Aligned_cols=109 Identities=20% Similarity=0.305 Sum_probs=74.5
Q ss_pred eEEcccccceecCCCCCcccccccccccccccccccC-CCccccchhhHhHHHHHHHHH-hcCCCCcccccccccHHHHH
Q 035782 9 AHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETF-TRKKPTDEMFIGEMSLRDWV 86 (159)
Q Consensus 9 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~-~~~~p~~~~~~~~~~~~~~~ 86 (159)
+|++|||++...... ....++..|+|||.+. +..++.++|+||||+++|+++ .|..||........ ...
T Consensus 151 ~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~---~~~ 221 (262)
T cd05077 151 IKLSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK---ERF 221 (262)
T ss_pred eEeCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH---HHH
Confidence 899999998654321 1234778899999876 456788999999999999997 47777654221110 000
Q ss_pred HhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 87 NKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
.. ... .. .......+.+++.+||+.||.+||++.+|++.+
T Consensus 222 ~~---~~~-~~--------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 222 YE---GQC-ML--------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred Hh---cCc-cC--------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 000 00 001234678899999999999999999998875
No 302
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.76 E-value=2.4e-18 Score=116.08 Aligned_cols=139 Identities=19% Similarity=0.149 Sum_probs=85.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||++........ ......++..|+|||++.+. .++.++|+||+|++++++++|..||.......
T Consensus 130 il~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 207 (283)
T cd07835 130 LLIDREGALKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID 207 (283)
T ss_pred EEEcCCCcEEEeecccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5778899999999999976532221 12223467889999987654 46788999999999999999999986532211
Q ss_pred ccHHHHHHhhcCC---cc------cchhhhhccc-cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSG---EL------TQVIDANLAR-DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~---~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............ .+ .......... ..............+.+++.+||+.||++|||+.+++.
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 208 -QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred -HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 111111100000 00 0000000000 00000111233467889999999999999999999874
No 303
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.76 E-value=3e-18 Score=113.79 Aligned_cols=125 Identities=23% Similarity=0.231 Sum_probs=87.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||.+................++..|.+||...+...+.++|+|++|++++++++|..||.....
T Consensus 132 i~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--- 208 (260)
T cd06606 132 ILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN--- 208 (260)
T ss_pred EEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---
Confidence 57788899999999999876543321112334578889999998887788999999999999999999999865431
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......... .. ......+...+..+.+++.+|+..+|++||++.++++
T Consensus 209 -~~~~~~~~~--------~~-----~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 209 -PMAALYKIG--------SS-----GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -hHHHHHhcc--------cc-----CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 000000000 00 0000011233567899999999999999999999985
No 304
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.76 E-value=2.9e-18 Score=114.66 Aligned_cols=123 Identities=21% Similarity=0.117 Sum_probs=83.2
Q ss_pred CccCCCCceEEcccccceecCCCCCc-ccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++........ .......++..|+|||.+.+..++.++|+||||++++++++|..||......
T Consensus 137 il~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~- 215 (265)
T cd06652 137 ILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM- 215 (265)
T ss_pred EEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-
Confidence 57888999999999998765321111 1122245788999999988778889999999999999999999998643111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
..+........ ....+......+.+++.+||. +|.+||+++++++
T Consensus 216 ----~~~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 216 ----AAIFKIATQPT-------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ----HHHHHHhcCCC-------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 00111000000 000122344567788889985 9999999999875
No 305
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.76 E-value=1.5e-18 Score=115.42 Aligned_cols=121 Identities=21% Similarity=0.230 Sum_probs=84.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc-cccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++....... ......++..|++||...... ++.++|+||+|++++++++|..||.......
T Consensus 133 i~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~ 209 (258)
T cd06632 133 ILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA 209 (258)
T ss_pred EEECCCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH
Confidence 567889999999999987754322 122345788899999876665 7889999999999999999999986532100
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............ ..+......+.+++.+||..+|++||++.+++.
T Consensus 210 ----~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 210 ----AVFKIGRSKELP--------------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ----HHHHHHhcccCC--------------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 000000000000 001133466788999999999999999999875
No 306
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.76 E-value=4.1e-18 Score=118.41 Aligned_cols=118 Identities=20% Similarity=0.191 Sum_probs=88.0
Q ss_pred CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHH
Q 035782 6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDW 85 (159)
Q Consensus 6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~ 85 (159)
++.+|++|||++..... .......+||+.|+|||++....|+..+|+||+|++.|.|++|..||.......... .
T Consensus 175 ~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--~ 249 (382)
T KOG0032|consen 175 SGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--A 249 (382)
T ss_pred CCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--H
Confidence 35899999999998754 223455789999999999998899999999999999999999999997643211111 1
Q ss_pred HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 86 VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+.. ..+ .... +..........+++..++..||.+|+|+.++++
T Consensus 250 i~~---~~~------~f~~-----~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 250 ILR---GDF------DFTS-----EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHc---CCC------CCCC-----CCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 110 000 0001 112255678889999999999999999999997
No 307
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.76 E-value=5.2e-18 Score=114.47 Aligned_cols=139 Identities=18% Similarity=0.190 Sum_probs=86.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||++........ .......++..|+|||.+.+. .++.++|+||+|++++++++|..+|......
T Consensus 130 i~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~- 207 (286)
T cd07832 130 LLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI- 207 (286)
T ss_pred EEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-
Confidence 5778889999999999987643321 112334688899999987654 4688999999999999999998777543211
Q ss_pred ccHHHHHHhhcCC----cccc---hhhhhc---cccch--hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSG----ELTQ---VIDANL---ARDEQ--SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~---~~~~~~---~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............ .+.. +.+... ..... ...........+.+++.+||..+|.+|||+++++.
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 208 -EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred -HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111111000 0000 000000 00000 00011234578899999999999999999999875
No 308
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.76 E-value=3.3e-18 Score=115.26 Aligned_cols=121 Identities=20% Similarity=0.274 Sum_probs=84.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++..+.... .....|+..|++||++.+. .++.++|+||+|++++++++|..||.......
T Consensus 128 ili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~ 203 (278)
T cd05606 128 ILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 203 (278)
T ss_pred EEECCCCCEEEccCcCccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc
Confidence 578889999999999987653222 1224688999999998644 57888999999999999999999986532111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
........... .. ..+...+..+.+++.+|+..+|++|| ++.++++
T Consensus 204 ~~~~~~~~~~~--------~~---------~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 204 KHEIDRMTLTM--------AV---------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred hHHHHHHhhcc--------CC---------CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 11000000000 00 01112356788999999999999999 9999884
No 309
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.76 E-value=1.8e-18 Score=116.66 Aligned_cols=140 Identities=21% Similarity=0.222 Sum_probs=86.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ...+...++..|++||.+.+. .++.++|+||||++++++++|..||.......
T Consensus 131 il~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~ 209 (287)
T cd07840 131 ILINNDGVLKLADFGLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE 209 (287)
T ss_pred eEEcCCCCEEEccccceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 5788999999999999987643321 112334567889999976543 57889999999999999999999986533211
Q ss_pred ccHHHHHHhh---cCCcccchhh----hhcccc---chhh-hhchH-HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKS---LSGELTQVID----ANLARD---EQSF-FVKMD-CLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~---~~~~~~~~~~----~~~~~~---~~~~-~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......... ....+...-+ ...... .... ..... ++..+.+++.+||..+|.+||++++++.
T Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 210 -QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred -HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 111111100 0000000000 000000 0000 00011 2567899999999999999999999875
No 310
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=5.5e-18 Score=109.25 Aligned_cols=139 Identities=15% Similarity=0.203 Sum_probs=89.2
Q ss_pred CccCCCCceEEcccccceecCCCCC--cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD--SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
+||+++|.+||+|||+++.+..... -...+..+-|.+|++||.+.+. .|+++.|+|+.||++.+|+++.+.+++...
T Consensus 155 vLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte 234 (376)
T KOG0669|consen 155 VLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE 234 (376)
T ss_pred EEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH
Confidence 5899999999999999987753322 2233445568999999988776 689999999999999999999988775321
Q ss_pred ccccHHHHHHhh---c-CCcccchhh----hhc--c----ccch---hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHH
Q 035782 78 GEMSLRDWVNKS---L-SGELTQVID----ANL--A----RDEQ---SFFVKMDCLSSIMHLALDCCMESPDQRIYMTDA 140 (159)
Q Consensus 78 ~~~~~~~~~~~~---~-~~~~~~~~~----~~~--~----~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~l 140 (159)
......+... + +.-|..... +.+ . +... .+..+........+++..++..||.+|+++.++
T Consensus 235 --qqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~a 312 (376)
T KOG0669|consen 235 --QQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQA 312 (376)
T ss_pred --HHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhh
Confidence 1111111111 1 111111110 001 0 0000 001111223467789999999999999999998
Q ss_pred H
Q 035782 141 A 141 (159)
Q Consensus 141 l 141 (159)
+
T Consensus 313 l 313 (376)
T KOG0669|consen 313 L 313 (376)
T ss_pred h
Confidence 8
No 311
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.75 E-value=4e-18 Score=118.02 Aligned_cols=142 Identities=17% Similarity=0.136 Sum_probs=87.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++..... .....++..|+|||++.+ ..++.++|+||+|++++++++|+.||.......
T Consensus 148 Ill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~ 222 (342)
T cd07879 148 LAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 222 (342)
T ss_pred EEECCCCCEEEeeCCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 57888999999999998754221 122457888999998765 357889999999999999999999997532111
Q ss_pred ccHHHHHHhhcCCc------------ccchhhhhc-cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH--HHH
Q 035782 80 MSLRDWVNKSLSGE------------LTQVIDANL-ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA--AKL 144 (159)
Q Consensus 80 ~~~~~~~~~~~~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll--~~l 144 (159)
....... ..... ....+.... ................+.+++.+||+.||.+||++.+++ ..+
T Consensus 223 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f 300 (342)
T cd07879 223 -QLTQILK-VTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300 (342)
T ss_pred -HHHHHHH-hcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcch
Confidence 0111000 00000 000000000 000000000112345678999999999999999999999 446
Q ss_pred HHHHH
Q 035782 145 KKIKE 149 (159)
Q Consensus 145 ~~~~~ 149 (159)
+.+..
T Consensus 301 ~~~~~ 305 (342)
T cd07879 301 DSFRD 305 (342)
T ss_pred hhccc
Confidence 55543
No 312
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.75 E-value=1.8e-18 Score=116.15 Aligned_cols=126 Identities=26% Similarity=0.370 Sum_probs=87.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~~ 79 (159)
|+++.++.++++|||++....... ........++..|++||.+.+..++.++|+||+|++++++++ |..||.....
T Consensus 148 ili~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-- 224 (275)
T cd05046 148 CLVSSQREVKVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-- 224 (275)
T ss_pred EEEeCCCcEEEcccccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--
Confidence 577888999999999987543222 112223346778999999887778889999999999999998 7778754221
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
............. ...+...+..+.+++.+||+.+|.+|||+.++++.|.
T Consensus 225 ---~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 225 ---EEVLNRLQAGKLE-------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ---HHHHHHHHcCCcC-------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111111100000 0011134567899999999999999999999998875
No 313
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.75 E-value=2e-18 Score=114.67 Aligned_cols=121 Identities=24% Similarity=0.339 Sum_probs=87.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||.+....... .......|++.|++||...+..++.++|+|++|++++++++|..||.....
T Consensus 134 il~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--- 208 (258)
T cd08215 134 IFLTSNGLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--- 208 (258)
T ss_pred eEEcCCCcEEECCccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH---
Confidence 577888999999999998764432 122234678899999998888888999999999999999999999854321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.............. .+...+..+.+++..||..+|++|||+.+++.
T Consensus 209 --~~~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 209 --LELALKILKGQYPP--------------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --HHHHHHHhcCCCCC--------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11111111111000 01134457889999999999999999999875
No 314
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.75 E-value=4.6e-18 Score=117.22 Aligned_cols=139 Identities=20% Similarity=0.213 Sum_probs=85.6
Q ss_pred CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++......... .......|+..|++||+..+ ..++.++|+||+|+++++++.|..||.....
T Consensus 136 ili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~ 215 (332)
T cd07857 136 LLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY 215 (332)
T ss_pred eEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH
Confidence 57888999999999999865432211 11233468889999998765 4678899999999999999999999864321
Q ss_pred ccccHHHHHHhhcCCcccchh----hh-------hccccch-hh-hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVI----DA-------NLARDEQ-SF-FVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~-~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
.. ................+ .+ .....+. .. .........+.+++.+||+.||.+|||+.+++
T Consensus 216 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 216 VD--QLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred HH--HHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 10 11100000000000000 00 0000000 00 00112345788999999999999999999988
No 315
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.75 E-value=4.5e-18 Score=115.55 Aligned_cols=138 Identities=17% Similarity=0.155 Sum_probs=86.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ......+++.|.|||.+.+ ..++.++|+||+|++++++++|..+|......+
T Consensus 133 ill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~ 210 (298)
T cd07841 133 LLIASDGVLKLADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID 210 (298)
T ss_pred EEEcCCCCEEEccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH
Confidence 5788999999999999987643221 1222346778999998754 356888999999999999999977775432211
Q ss_pred ccHHHHHHhhcCCc----c------cchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGE----L------TQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............ + ........................+.+++.+||+.||++|||+.|++.
T Consensus 211 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 211 --QLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred --HHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 111111110000 0 000000000001111112234567899999999999999999999986
No 316
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.75 E-value=5.2e-18 Score=114.18 Aligned_cols=121 Identities=20% Similarity=0.304 Sum_probs=85.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++....... .......++..|++||.+.+..++.++|+||+|++++++++|..||......
T Consensus 132 i~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-- 207 (277)
T cd06641 132 VLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-- 207 (277)
T ss_pred EEECCCCCEEEeecccceecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--
Confidence 567888999999999987654321 1122345788899999988777888999999999999999999998642211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.....+.. .. ... .+...+..+.+++.+||+.+|++||++.++++
T Consensus 208 ~~~~~~~~---~~-~~~-------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 208 KVLFLIPK---NN-PPT-------------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred HHHHHHhc---CC-CCC-------------CCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000100 00 000 01134566889999999999999999999997
No 317
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.75 E-value=5.3e-18 Score=115.35 Aligned_cols=139 Identities=19% Similarity=0.187 Sum_probs=86.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ .......++..|++||.+.+. .++.++|+||+|++++++++|+.||.....
T Consensus 147 ili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-- 223 (302)
T cd07864 147 ILLNNKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-- 223 (302)
T ss_pred EEECCCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--
Confidence 5788899999999999977643221 112223457789999987653 467889999999999999999999864321
Q ss_pred ccHHHHHHhhc----CCcccchhhhhc--------cccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSL----SGELTQVIDANL--------ARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~----~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......+.... +..+..+..... .............+..+.+++.+||+.||++||++.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 224 LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11111111111 111111100000 0000000111123567899999999999999999999875
No 318
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.75 E-value=3.5e-18 Score=117.16 Aligned_cols=120 Identities=24% Similarity=0.282 Sum_probs=83.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++...... ....++..|++||++. ...++.++|+||||++++++++|..||.....
T Consensus 156 il~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~ 229 (317)
T cd06635 156 ILLTEPGQVKLADFGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 229 (317)
T ss_pred EEECCCCCEEEecCCCccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH
Confidence 56788899999999998654321 2245788899999863 34578899999999999999999999754311
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
... ...... .... . .........+.+++.+||+.+|.+||++.++++.+
T Consensus 230 ~~~-~~~~~~----~~~~--------~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 230 MSA-LYHIAQ----NESP--------T-----LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred HHH-HHHHHh----ccCC--------C-----CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 100 000000 0000 0 00113445688999999999999999999998754
No 319
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.75 E-value=3.9e-19 Score=122.47 Aligned_cols=121 Identities=21% Similarity=0.219 Sum_probs=82.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||++.++.+||+|||++........ .....+||+.|+|||++.+. .++.++|+||+|+++++|++|..||.....
T Consensus 127 ili~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-- 202 (330)
T cd05586 127 ILLDATGHIALCDFGLSKANLTDNK--TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-- 202 (330)
T ss_pred eEECCCCCEEEecCCcCcCCCCCCC--CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--
Confidence 6788999999999999875422211 12335689999999988654 478899999999999999999999865321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC----cHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI----YMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp----t~~~ll~ 142 (159)
............ . + + .......+.+++.+||+.||.+|| ++.++++
T Consensus 203 ---~~~~~~i~~~~~-~-----~---~-----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 203 ---QQMYRNIAFGKV-R-----F---P-----KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ---HHHHHHHHcCCC-C-----C---C-----CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 111111100000 0 0 0 012344678899999999999998 5666654
No 320
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.75 E-value=2.7e-18 Score=117.22 Aligned_cols=120 Identities=23% Similarity=0.241 Sum_probs=82.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++...... ....+++.|+|||.+. ...++.++|+||+|++++++++|..||.....
T Consensus 146 il~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 219 (308)
T cd06634 146 ILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (308)
T ss_pred EEECCCCcEEECCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH
Confidence 57788899999999998765322 2245788899999864 33567889999999999999999999754211
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
.. ....... ... + ..........+.+++.+||..+|.+||++.++++..
T Consensus 220 ~~--~~~~~~~---~~~---------~----~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 220 MS--ALYHIAQ---NES---------P----ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred HH--HHHHHhh---cCC---------C----CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 10 0000000 000 0 000113445688999999999999999999988543
No 321
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.75 E-value=5.3e-18 Score=114.81 Aligned_cols=140 Identities=19% Similarity=0.163 Sum_probs=83.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||+++....... ......++..|+|||++.+ ..++.++|+||+|++++++++|..||.......
T Consensus 134 il~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~ 211 (291)
T cd07844 134 LLISERGELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE 211 (291)
T ss_pred EEEcCCCCEEECccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence 5788999999999999875432111 1122346778999998765 357889999999999999999999986543111
Q ss_pred ccHHHHHHhhc---CCcccchhh------hhccc-cchh-hhh--chHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSL---SGELTQVID------ANLAR-DEQS-FFV--KMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~---~~~~~~~~~------~~~~~-~~~~-~~~--~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
........... ...+..... ..... .... ... .......+.+++.+||+.+|.+|||+.+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 212 DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred HHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 11111110000 000000000 00000 0000 000 0011256789999999999999999999874
No 322
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.75 E-value=3.3e-18 Score=114.05 Aligned_cols=111 Identities=21% Similarity=0.252 Sum_probs=75.1
Q ss_pred ceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcC-CCCcccccccccHHHH
Q 035782 8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRK-KPTDEMFIGEMSLRDW 85 (159)
Q Consensus 8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~-~p~~~~~~~~~~~~~~ 85 (159)
.++++|||++...... ....++..|+|||++.+. .++.++|+||+|++++++++|. .|+....... ....
T Consensus 146 ~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~~~ 217 (258)
T cd05078 146 FIKLSDPGISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KLQF 217 (258)
T ss_pred eEEecccccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HHHH
Confidence 3699999988654321 223577889999998764 4788899999999999999985 5543321110 0000
Q ss_pred HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 86 VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
.. ... ..+......+.+++.+||+.||++|||+.++++.|+
T Consensus 218 ~~------------~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 218 YE------------DRH-------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HH------------ccc-------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 000 001122356889999999999999999999998863
No 323
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.75 E-value=1.6e-18 Score=121.59 Aligned_cols=95 Identities=23% Similarity=0.194 Sum_probs=62.5
Q ss_pred cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhh
Q 035782 32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV 111 (159)
Q Consensus 32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (159)
.+||+.|+|||++.+..++.++|+||+||+++++++|..||......... ..+... ... + ..+ .
T Consensus 208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--~~i~~~-----~~~----~-~~~----~ 271 (381)
T cd05626 208 LVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQ--LKVINW-----ENT----L-HIP----P 271 (381)
T ss_pred ccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHH--HHHHcc-----ccc----c-CCC----C
Confidence 46899999999998888899999999999999999999999653221110 000000 000 0 000 0
Q ss_pred chHHHHHHHHHHhh--hcCCCCCCCCcHHHHHH
Q 035782 112 KMDCLSSIMHLALD--CCMESPDQRIYMTDAAA 142 (159)
Q Consensus 112 ~~~~~~~~~~l~~~--cl~~~p~~Rpt~~~ll~ 142 (159)
.......+.+++.+ |+..++..|+++.+++.
T Consensus 272 ~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 272 QVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred CCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 01233456667766 55667777999999985
No 324
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.75 E-value=2.5e-18 Score=129.98 Aligned_cols=116 Identities=19% Similarity=0.224 Sum_probs=80.0
Q ss_pred CCCceEEcccccceecCCCCCcccccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCcccccccccH
Q 035782 5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSL 82 (159)
Q Consensus 5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~ 82 (159)
..+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|++++|..||..... .
T Consensus 177 g~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~----~ 249 (1021)
T PTZ00266 177 GRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN----F 249 (1021)
T ss_pred CCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc----H
Confidence 34568999999997653222 1233568999999998754 3578899999999999999999999864321 1
Q ss_pred HHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 83 RDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
...+...... +.+. ....+..+.+++..||..+|.+||++.+++.
T Consensus 250 ~qli~~lk~~-------p~lp--------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 250 SQLISELKRG-------PDLP--------IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHHHhcC-------CCCC--------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 1111110000 0000 0123456889999999999999999999983
No 325
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.74 E-value=7e-18 Score=114.37 Aligned_cols=139 Identities=19% Similarity=0.154 Sum_probs=85.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++..+..... ......+++.|+|||.+.+. .++.++|+||+|++++++++|..||.......
T Consensus 137 ili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~ 214 (293)
T cd07843 137 LLLNNRGILKICDFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID 214 (293)
T ss_pred EEECCCCcEEEeecCceeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 6788999999999999987643321 12234567889999987654 45788999999999999999999987532211
Q ss_pred ccHHHHHHhhc---CCccc---chhh---hhccccch---hhhhchH-HHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSL---SGELT---QVID---ANLARDEQ---SFFVKMD-CLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~---~~~~~---~~~~---~~~~~~~~---~~~~~~~-~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.......... ...+. .+.. ........ ....+.. ....+.+++.+||+.+|++|||+.|++.
T Consensus 215 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 215 -QLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred -HHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0100000000 00000 0000 00000000 0000001 3566889999999999999999999975
No 326
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.74 E-value=6.3e-18 Score=114.62 Aligned_cols=139 Identities=19% Similarity=0.117 Sum_probs=84.1
Q ss_pred CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
|+++. ++.+||+|||++..+..... ......+++.|+|||++.+ ..++.++|+||+|++++++++|..||......
T Consensus 141 il~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~ 218 (295)
T cd07837 141 LLVDKQKGLLKIADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL 218 (295)
T ss_pred EEEecCCCeEEEeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 56777 88999999999976532211 1122346788999998765 35688999999999999999999998643211
Q ss_pred cccHHHHHHhhcCC---cccchh---hhhccc--cchh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 79 EMSLRDWVNKSLSG---ELTQVI---DANLAR--DEQS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 79 ~~~~~~~~~~~~~~---~~~~~~---~~~~~~--~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
. ............ .+.... .....+ .+.. ..........+.+++.+||..||++||++.+++.
T Consensus 219 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 219 Q-QLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred H-HHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 111111100000 000000 000000 0000 0001134567889999999999999999999874
No 327
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.74 E-value=6.4e-18 Score=112.78 Aligned_cols=123 Identities=24% Similarity=0.272 Sum_probs=85.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++....... ......+++.|++||.+.+..++.++|+|++|++++++++|..||.....+.
T Consensus 124 ilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~- 199 (262)
T cd05572 124 LLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP- 199 (262)
T ss_pred EEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-
Confidence 578889999999999998764332 1122457888999999887788899999999999999999999986543211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY-----MTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt-----~~~ll~ 142 (159)
.......... ......+...+..+.+++.+||..+|++||+ +.|+++
T Consensus 200 --~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 200 --MEIYNDILKG-------------NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred --HHHHHHHhcc-------------CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 1111110000 0000011123567899999999999999999 777764
No 328
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.74 E-value=2.2e-18 Score=114.93 Aligned_cols=119 Identities=20% Similarity=0.195 Sum_probs=81.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++..... .....++..|++||.+.+..++.++|+||+|++++++++|..||.......
T Consensus 128 il~~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~- 200 (260)
T cd05611 128 LLIDQTGHLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA- 200 (260)
T ss_pred eEECCCCcEEEeecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-
Confidence 5788899999999999876432 122357788999999887778889999999999999999999986432211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
......... ... +. .....++..+.+++.+||..+|++||++..+.
T Consensus 201 ----~~~~~~~~~--------~~~-~~--~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~ 246 (260)
T cd05611 201 ----VFDNILSRR--------INW-PE--EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQ 246 (260)
T ss_pred ----HHHHHHhcc--------cCC-CC--cccccCCHHHHHHHHHHccCCHHHccCCCcHH
Confidence 111000000 000 00 00113456789999999999999999765443
No 329
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.74 E-value=4.5e-18 Score=112.98 Aligned_cols=119 Identities=27% Similarity=0.299 Sum_probs=86.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++...... ......+++.|++||.+.+..++.++|+||+|++++++++|..||.......
T Consensus 134 i~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~- 208 (256)
T cd08530 134 ILLVANDLVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD- 208 (256)
T ss_pred EEEecCCcEEEeeccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 46778889999999999776433 1122457888999999888888889999999999999999999986532211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
...... ..... ..+......+.+++.+||..+|++||++.++++
T Consensus 209 -~~~~~~---~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 209 -LRYKVQ---RGKYP--------------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -HHHHHh---cCCCC--------------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111110 00000 011244567899999999999999999999875
No 330
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.74 E-value=2.2e-18 Score=113.92 Aligned_cols=74 Identities=23% Similarity=0.313 Sum_probs=59.3
Q ss_pred CccCCC----CceEEcccccceecCCCCCc-ccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDED----MVAHVSDFGISKLLGDGDDS-VTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~----~~~kl~Dfg~~~~~~~~~~~-~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
||+..+ |.|||+|||+++.+.+.-.- .....++-|.+|.|||.+.+. .|+.+.|+|+.||++.|+++-++.|.+
T Consensus 163 IlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 163 ILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred EEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 445545 99999999999998643322 234456779999999998877 689999999999999999998887765
No 331
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.74 E-value=8.7e-18 Score=114.64 Aligned_cols=141 Identities=17% Similarity=0.119 Sum_probs=84.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcc---------cccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV---------TQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKK 70 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~---------~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~ 70 (159)
|+++.++.+||+|||+++......... ..+...+++.|+|||...+. .++.++|+||+|++++++++|..
T Consensus 146 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~ 225 (311)
T cd07866 146 ILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRP 225 (311)
T ss_pred EEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCC
Confidence 578899999999999997653222111 11234567889999987554 57888999999999999999999
Q ss_pred CCcccccccccHHHHHHhh---cCCccc------chhhhhc-cccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782 71 PTDEMFIGEMSLRDWVNKS---LSGELT------QVIDANL-ARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYMTD 139 (159)
Q Consensus 71 p~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ 139 (159)
||....... ......... ....+. ....... ...+. ...........+.+++.+||..||.+|||+.+
T Consensus 226 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~e 304 (311)
T cd07866 226 ILQGKSDID-QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASD 304 (311)
T ss_pred CCCCCCHHH-HHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHH
Confidence 986432211 111111000 000000 0000000 00000 00001122356889999999999999999998
Q ss_pred HHH
Q 035782 140 AAA 142 (159)
Q Consensus 140 ll~ 142 (159)
++.
T Consensus 305 ll~ 307 (311)
T cd07866 305 ALE 307 (311)
T ss_pred Hhc
Confidence 874
No 332
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.74 E-value=5.7e-18 Score=117.29 Aligned_cols=135 Identities=23% Similarity=0.227 Sum_probs=84.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++...... .....++..|++||.+.+. .++.++|+||+|++++++++|..||.......
T Consensus 149 ill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~ 223 (343)
T cd07851 149 IAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID 223 (343)
T ss_pred eEECCCCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 57888999999999999765322 1224577889999987553 56788999999999999999999986432111
Q ss_pred ccHHHHHHhhcCC------------cccchhhhhccccchhh-hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSG------------ELTQVIDANLARDEQSF-FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.+.. +...... ....++........... .........+.+++.+||+.||.+|||+.+|+.
T Consensus 224 -~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 224 -QLKR-IMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred -HHHH-HHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0111 1010000 00001000000000000 000123567899999999999999999999874
No 333
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.74 E-value=2.2e-18 Score=120.51 Aligned_cols=126 Identities=19% Similarity=0.223 Sum_probs=82.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC----ccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
||++.++.+||+|||++........ ......+||+.|+|||++... .++.++|+||+|+++++|++|..||....
T Consensus 173 Ill~~~~~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 251 (371)
T cd05622 173 MLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (371)
T ss_pred EEECCCCCEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence 5788999999999999987643221 122345699999999987653 27789999999999999999999996532
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAAK 143 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~~ 143 (159)
.. .......... . ....+........+.+++..|+..++.+ |+++.++++.
T Consensus 252 ~~-----~~~~~i~~~~-~----------~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 252 LV-----GTYSKIMNHK-N----------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred HH-----HHHHHHHcCC-C----------cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11 1111100000 0 0000111134556788899999844433 7889888863
No 334
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.74 E-value=9.6e-18 Score=110.30 Aligned_cols=123 Identities=16% Similarity=0.155 Sum_probs=87.3
Q ss_pred CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHH
Q 035782 5 EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRD 84 (159)
Q Consensus 5 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~ 84 (159)
.+..+||+|||+|+.-.. .....+.+-||.|.|||++...+|....|+||+|+++|-+++|.+||.......
T Consensus 199 ~na~lKLtDfGFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a----- 270 (400)
T KOG0604|consen 199 PNAPLKLTDFGFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA----- 270 (400)
T ss_pred CCcceEecccccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-----
Confidence 456789999999987532 223455778999999999999999999999999999999999999997643211
Q ss_pred HHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 85 WVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
++...+.-+....-..+.. ......+...++++..|..+|++|.|++++..
T Consensus 271 -----ispgMk~rI~~gqy~FP~p--EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 271 -----ISPGMKRRIRTGQYEFPEP--EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred -----CChhHHhHhhccCccCCCh--hHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1122222221111111111 11245667788999999999999999998874
No 335
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.74 E-value=1.6e-18 Score=120.81 Aligned_cols=125 Identities=21% Similarity=0.252 Sum_probs=83.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcc------------------------------------ccccccccccccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV------------------------------------TQTMTMATIGYMAPEYG 44 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------------~~~~~~gt~~~~~pe~~ 44 (159)
||++.++.+||+|||++..+....... .....+||+.|+|||++
T Consensus 132 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 211 (364)
T cd05599 132 LLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVF 211 (364)
T ss_pred eEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHH
Confidence 688999999999999987643211000 01124689999999999
Q ss_pred CCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHh
Q 035782 45 SEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLAL 124 (159)
Q Consensus 45 ~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (159)
....++.++|+||+||+++++++|..||...... ......... ... +. .+ ......+.+.+++.
T Consensus 212 ~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~-----~~~~~i~~~--~~~----~~-~~----~~~~~s~~~~~li~ 275 (364)
T cd05599 212 LQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ-----ETYRKIINW--KET----LQ-FP----DEVPLSPEAKDLIK 275 (364)
T ss_pred cCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH-----HHHHHHHcC--CCc----cC-CC----CCCCCCHHHHHHHH
Confidence 8888999999999999999999999998653211 111110000 000 00 00 00123456778888
Q ss_pred hhcCCCCCCCCc---HHHHHH
Q 035782 125 DCCMESPDQRIY---MTDAAA 142 (159)
Q Consensus 125 ~cl~~~p~~Rpt---~~~ll~ 142 (159)
+|+. +|.+|++ +.+++.
T Consensus 276 ~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 276 RLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred HHcc-CHhhcCCCCCHHHHhc
Confidence 8886 9999998 888875
No 336
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.74 E-value=5e-18 Score=116.23 Aligned_cols=124 Identities=23% Similarity=0.257 Sum_probs=85.5
Q ss_pred CccCCCCceEEcccccceecCCCCCc---------------------------ccccccccccccccccccCCCccccch
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS---------------------------VTQTMTMATIGYMAPEYGSEGIVSTKC 53 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------~~~~~~~gt~~~~~pe~~~~~~~~~~~ 53 (159)
|+++.++.++|+|||++......... .......|+..|++||++.+..++.++
T Consensus 134 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~ 213 (316)
T cd05574 134 ILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAV 213 (316)
T ss_pred eEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchH
Confidence 57888999999999998754321110 011123578889999999888888999
Q ss_pred hhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC
Q 035782 54 DVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ 133 (159)
Q Consensus 54 dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~ 133 (159)
|+||+|++++++++|..||....... .+.. ....... .+.....+..+.+++.+||..||++
T Consensus 214 Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~------------~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~ 275 (316)
T cd05574 214 DWWTLGILLYEMLYGTTPFKGSNRDE-TFSN------------ILKKEVT-----FPGSPPVSSSARDLIRKLLVKDPSK 275 (316)
T ss_pred HHHHHHHHHHHHhhCCCCCCCCchHH-HHHH------------HhcCCcc-----CCCccccCHHHHHHHHHHccCCHhH
Confidence 99999999999999999986532211 0100 0000000 0001124567999999999999999
Q ss_pred CCc----HHHHHH
Q 035782 134 RIY----MTDAAA 142 (159)
Q Consensus 134 Rpt----~~~ll~ 142 (159)
||| +.+++.
T Consensus 276 R~s~~~~~~~ll~ 288 (316)
T cd05574 276 RLGSKRGAAEIKQ 288 (316)
T ss_pred CCCchhhHHHHHc
Confidence 999 888775
No 337
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.73 E-value=1.8e-17 Score=111.70 Aligned_cols=139 Identities=16% Similarity=0.165 Sum_probs=84.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||.+........ .....++..|+|||++.. ..++.++|+||||++++++++|..||......+
T Consensus 130 i~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~ 206 (283)
T cd07830 130 LLVSGPEVVKIADFGLAREIRSRPP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID 206 (283)
T ss_pred EEEcCCCCEEEeecccceeccCCCC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH
Confidence 5788899999999999976643222 223457888999997744 457889999999999999999999886432211
Q ss_pred ccH--HHHHHhhcCCcccc------hhhhhccccc-hh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSL--RDWVNKSLSGELTQ------VIDANLARDE-QS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~--~~~~~~~~~~~~~~------~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
... ...........+.. .....+.... .. ..........+.+++.+||+.+|.+|||+.|++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 207 QLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred HHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 100 00000000000000 0000000000 00 0000112467889999999999999999999875
No 338
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.73 E-value=1.9e-18 Score=121.22 Aligned_cols=44 Identities=30% Similarity=0.389 Sum_probs=40.2
Q ss_pred cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
.+||+.|+|||++.+..++.++|+||+||++++|++|..||...
T Consensus 208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 208 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred cccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCC
Confidence 46899999999998888999999999999999999999999653
No 339
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.73 E-value=5.1e-18 Score=114.94 Aligned_cols=116 Identities=21% Similarity=0.208 Sum_probs=83.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||++...... .....+++.|++||.+.+...+.++|+||+|++++++++|..||.....
T Consensus 132 ili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--- 203 (290)
T cd05580 132 LLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--- 203 (290)
T ss_pred EEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---
Confidence 57889999999999999876433 2234578899999998877788899999999999999999999864321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll 141 (159)
............ ..+......+.+++.+||..||.+|+ ++.|++
T Consensus 204 --~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 204 --IQIYEKILEGKV---------------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred --HHHHHHHhcCCc---------------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 111111000000 00112345788999999999999999 777776
No 340
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.73 E-value=3.9e-18 Score=118.95 Aligned_cols=75 Identities=28% Similarity=0.367 Sum_probs=59.8
Q ss_pred CccCCCCceEEcccccceecCCCCCc---------------------------------ccccccccccccccccccCCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS---------------------------------VTQTMTMATIGYMAPEYGSEG 47 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------~~~~~~~gt~~~~~pe~~~~~ 47 (159)
||++.++.+||+|||+++.+...... ......+||+.|+|||++.+.
T Consensus 132 ILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~ 211 (363)
T cd05628 132 LLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT 211 (363)
T ss_pred eEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC
Confidence 68899999999999998754321100 001234699999999999888
Q ss_pred ccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 48 IVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 48 ~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
.++.++|+||+|+++++|++|..||...
T Consensus 212 ~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 212 GYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred CCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 8999999999999999999999999653
No 341
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.73 E-value=1.3e-17 Score=110.94 Aligned_cols=122 Identities=25% Similarity=0.323 Sum_probs=84.4
Q ss_pred CccCCCC-ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDM-VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|++++++ .+||+|||.+........ ......|++.|+|||+..+..++.++|+||+|++++++++|..||.....
T Consensus 132 il~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-- 207 (257)
T cd08225 132 IFLSKNGMVAKLGDFGIARQLNDSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-- 207 (257)
T ss_pred EEEcCCCCeEEecccccchhccCCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--
Confidence 4666664 569999999877643222 12224578889999998777788999999999999999999999864321
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
............. .. ....+..+.+++.+||..+|++|||+.++++.
T Consensus 208 ---~~~~~~~~~~~~~--------~~------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 208 ---HQLVLKICQGYFA--------PI------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ---HHHHHHHhcccCC--------CC------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1111111111100 00 11234568899999999999999999999863
No 342
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.73 E-value=3.9e-18 Score=126.84 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=83.6
Q ss_pred CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHH
Q 035782 4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLR 83 (159)
Q Consensus 4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~ 83 (159)
...+..++.|||.+...............+||+.|+|||++.+..++.++|+|||||++||+++|..||......
T Consensus 512 ~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~----- 586 (669)
T cd05610 512 TPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ----- 586 (669)
T ss_pred CCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----
Confidence 334456778888887654333323334467999999999998888999999999999999999999998643211
Q ss_pred HHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 84 DWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
..+.... ..... .+. ........+..++.+||..||.+||++.++++.
T Consensus 587 ~~~~~il--------~~~~~-~p~---~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h 634 (669)
T cd05610 587 QVFQNIL--------NRDIP-WPE---GEEKLSVNAQNAIEILLTMDPTKRAGLKELKQH 634 (669)
T ss_pred HHHHHHH--------hcCCC-CCc---ccccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence 1111110 00000 000 011234567888999999999999999999853
No 343
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.73 E-value=1e-17 Score=112.75 Aligned_cols=123 Identities=19% Similarity=0.232 Sum_probs=84.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.+||+|||.+....... ......++..|++||+..+..++.++|+||+|++++++++|..||.......
T Consensus 126 il~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~- 201 (277)
T cd05577 126 VLLDDHGNVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV- 201 (277)
T ss_pred EEECCCCCEEEccCcchhhhccCC---ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-
Confidence 578889999999999987653211 1122346778999999888778889999999999999999999986532210
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
........ .. .. ....+......+.+++.+||+.||++|| ++.+++.
T Consensus 202 ~~~~~~~~-~~------------~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 202 EKEELKRR-TL------------EM--AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cHHHHHhc-cc------------cc--cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 00010000 00 00 0001123356788999999999999999 6666763
No 344
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.73 E-value=1.4e-17 Score=111.44 Aligned_cols=127 Identities=22% Similarity=0.277 Sum_probs=84.7
Q ss_pred CccCCCC-ceEEcccccceecCCCCC--cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDM-VAHVSDFGISKLLGDGDD--SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~-~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++ .+||+|||.+........ ........++..|++||.+.+..++.++|+|++|++++++++|..||.....
T Consensus 134 il~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~ 213 (268)
T cd06630 134 LLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH 213 (268)
T ss_pred EEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 4566555 699999999877643211 1112234578899999998887888999999999999999999999864221
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
. .....+....... . ....+......+.+++..||..+|++||++.++++
T Consensus 214 ~--~~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 214 S--NHLALIFKIASAT--------T-----APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred c--chHHHHHHHhccC--------C-----CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1 1111111000000 0 00111234567888999999999999999999985
No 345
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.73 E-value=1.8e-17 Score=114.21 Aligned_cols=138 Identities=20% Similarity=0.202 Sum_probs=84.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.+...... .....++..|++||.+.+ ..++.++|+||+|++++++++|..||.......
T Consensus 139 ili~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~ 213 (328)
T cd07856 139 ILINENCDLKICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN 213 (328)
T ss_pred EeECCCCCEEeCccccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 57788899999999998764321 122346788999998765 467889999999999999999999986432110
Q ss_pred c--cHH--------HHHHhhcCCcccchhhhhccccchh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 80 M--SLR--------DWVNKSLSGELTQVIDANLARDEQS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 80 ~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
. ... ++...........++.......... ..........+.+++.+||+.+|++|||+.+++..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000 0000000000000000000000000 00011235678999999999999999999998743
No 346
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.73 E-value=3.4e-18 Score=119.48 Aligned_cols=126 Identities=19% Similarity=0.252 Sum_probs=82.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC----ccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
||++.++.+||+|||++........ .......||+.|+|||++.+. .++.++|+||+|++++++++|..||....
T Consensus 173 ILl~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~ 251 (370)
T cd05621 173 MLLDKHGHLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251 (370)
T ss_pred EEECCCCCEEEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence 6889999999999999987643222 122345699999999987653 36789999999999999999999996432
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAAK 143 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~~ 143 (159)
.. ..... +....... ..+........+.+++..|+..++.+ |+++.++++.
T Consensus 252 ~~-----~~~~~--------i~~~~~~~---~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 252 LV-----GTYSK--------IMDHKNSL---NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HH-----HHHHH--------HHhCCccc---CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11 11111 00000000 00001123455777888888755543 8899998853
No 347
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.72 E-value=6.7e-18 Score=112.60 Aligned_cols=124 Identities=20% Similarity=0.254 Sum_probs=83.6
Q ss_pred CccCCCCceEEcccccceecCCCCC------cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD------SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
|+++.++.+||+|||++........ ........++..|++||.......+.++|+||+|++++++++|..||..
T Consensus 124 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~ 203 (265)
T cd05579 124 ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHG 203 (265)
T ss_pred eEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 5788999999999999876432211 1122334577889999998877788899999999999999999999864
Q ss_pred cccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 75 MFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... .......... .. .+.....+..+.+++.+||+.+|++|||+..+.+
T Consensus 204 ~~~~-----~~~~~~~~~~--------~~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~ 253 (265)
T cd05579 204 ETPE-----EIFQNILNGK--------IE-----WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEE 253 (265)
T ss_pred CCHH-----HHHHHHhcCC--------cC-----CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHH
Confidence 3211 1111110000 00 0000012567889999999999999999944433
No 348
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.72 E-value=3.5e-17 Score=112.98 Aligned_cols=140 Identities=18% Similarity=0.162 Sum_probs=85.6
Q ss_pred CccCCCCceEEcccccceecCCCCC------------cccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHh
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD------------SVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFT 67 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~ 67 (159)
|+++.++.+||+|||.+........ ........++..|++||++.+. .++.++|+||+|++++++++
T Consensus 150 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t 229 (335)
T PTZ00024 150 IFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT 229 (335)
T ss_pred eEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh
Confidence 5788899999999999976641110 1111223467789999988654 46889999999999999999
Q ss_pred cCCCCcccccccccHHHHHHhhcC----Ccccchhh-----hhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 68 RKKPTDEMFIGEMSLRDWVNKSLS----GELTQVID-----ANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 68 ~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
|..||......+ ....+..... ..+..... +.....+. ...........+.+++.+||+.+|++|||+
T Consensus 230 g~~p~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 307 (335)
T PTZ00024 230 GKPLFPGENEID--QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA 307 (335)
T ss_pred CCCCCCCCCHHH--HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence 999986532211 1111111110 00111000 00000000 000111234568899999999999999999
Q ss_pred HHHHH
Q 035782 138 TDAAA 142 (159)
Q Consensus 138 ~~ll~ 142 (159)
++++.
T Consensus 308 ~~~l~ 312 (335)
T PTZ00024 308 KEALK 312 (335)
T ss_pred HHHhc
Confidence 99985
No 349
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.72 E-value=1.1e-17 Score=114.44 Aligned_cols=118 Identities=25% Similarity=0.252 Sum_probs=81.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC---CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++.++.+||+|||++..... .+...|+..|++||++. ...++.++|+||+|++++++++|..||.....
T Consensus 152 ili~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~ 225 (313)
T cd06633 152 ILLTEPGQVKLADFGSASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 225 (313)
T ss_pred EEECCCCCEEEeecCCCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 5678889999999999864321 12345788999999874 34577889999999999999999999754321
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
. ........ ...... ........+.+++.+||+.+|.+||++.+++.
T Consensus 226 ~--~~~~~~~~---~~~~~~-------------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 226 M--SALYHIAQ---NDSPTL-------------QSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred H--HHHHHHHh---cCCCCC-------------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 11111100 000000 00123345788999999999999999999985
No 350
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=5.4e-18 Score=118.40 Aligned_cols=115 Identities=22% Similarity=0.305 Sum_probs=85.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
.+++.+|-+||.|||+|+.+..+.... +++|||.|.|||++.+..+..++|.|++|+.++|+++|.+||.+..+..
T Consensus 551 llLd~~Gy~KLVDFGFAKki~~g~KTw---TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk- 626 (732)
T KOG0614|consen 551 LLLDNRGYLKLVDFGFAKKIGSGRKTW---TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK- 626 (732)
T ss_pred eeeccCCceEEeehhhHHHhccCCcee---eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-
Confidence 378999999999999999987655433 3789999999999999999999999999999999999999998643211
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY 136 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt 136 (159)
.+ +++-+.+..- ..|..+.....+++++.+..+|++|.-
T Consensus 627 tY-------------n~ILkGid~i----~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 627 TY-------------NLILKGIDKI----EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred HH-------------HHHHhhhhhh----hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 11 1111111110 011244556778899999999999965
No 351
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.72 E-value=3.3e-17 Score=110.30 Aligned_cols=137 Identities=22% Similarity=0.171 Sum_probs=85.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||.+........ ......++..|+|||.+.+. .++.+.|+|++|++++++++|..||......+
T Consensus 129 i~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~ 206 (282)
T cd07829 129 ILINRDGVLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID 206 (282)
T ss_pred EEEcCCCCEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 5778889999999999977643221 12223456789999987665 67888999999999999999999986532111
Q ss_pred ccHHHHHHhh---cCCc---------ccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKS---LSGE---------LTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
......... .... ......... ..... .........+.+++..||..||++||++++++.
T Consensus 207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 207 -QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP-PKDLE-KVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred -HHHHHHHHhCCCcHHHHHhhcccccccccccccC-ccchH-HhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000000 0000 000000000 00000 001122567999999999999999999999875
No 352
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.72 E-value=1.3e-17 Score=111.13 Aligned_cols=121 Identities=26% Similarity=0.287 Sum_probs=85.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++....... ......|+..|++||...+..++.++|+||+|++++++++|..||......
T Consensus 131 il~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-- 205 (258)
T cd05578 131 ILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-- 205 (258)
T ss_pred eEEcCCCCEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--
Confidence 578899999999999987754332 122345778899999988877889999999999999999999998753321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH--HHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM--TDAA 141 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~--~~ll 141 (159)
............ . ...+...+..+.+++.+||..||.+||++ .|++
T Consensus 206 -~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 206 -IRDQIRAKQETA-D-------------VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -HHHHHHHHhccc-c-------------ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111111111000 0 00111334678899999999999999999 5554
No 353
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.72 E-value=1.6e-18 Score=121.42 Aligned_cols=125 Identities=23% Similarity=0.236 Sum_probs=80.7
Q ss_pred CccCCCCceEEcccccceecCCCCC-----------------------------------------cccccccccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD-----------------------------------------SVTQTMTMATIGYM 39 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~-----------------------------------------~~~~~~~~gt~~~~ 39 (159)
||++.++.+||+|||++..+..... .......+||+.|+
T Consensus 132 ill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 211 (376)
T cd05598 132 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYI 211 (376)
T ss_pred EEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCcccc
Confidence 5788999999999999753321000 00011346899999
Q ss_pred cccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHH
Q 035782 40 APEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSI 119 (159)
Q Consensus 40 ~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (159)
|||++.+..++.++|+||+||+++++++|..||........ ...+.... .. .. .+........+
T Consensus 212 aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~~~i~~~~-~~--------~~-----~~~~~~~s~~~ 275 (376)
T cd05598 212 APEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAET--QLKVINWE-TT--------LH-----IPSQAKLSREA 275 (376)
T ss_pred CHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHH--HHHHhccC-cc--------cc-----CCCCCCCCHHH
Confidence 99999888899999999999999999999999965332111 00000000 00 00 00001233456
Q ss_pred HHHHhhhcCCCCCCCC---cHHHHHH
Q 035782 120 MHLALDCCMESPDQRI---YMTDAAA 142 (159)
Q Consensus 120 ~~l~~~cl~~~p~~Rp---t~~~ll~ 142 (159)
.+++.+|+ .+|.+|+ ++.++++
T Consensus 276 ~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 276 SDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred HHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 66777765 5999999 8898884
No 354
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.72 E-value=1.5e-17 Score=114.45 Aligned_cols=147 Identities=19% Similarity=0.236 Sum_probs=85.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcc-----cccccccccccccccccCC--CccccchhhHhHHHHHHHHHhcCCCCc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTRKKPTD 73 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~~~~p~~ 73 (159)
||++.++.++++||+.+.......... ......++..|+|||++.+ ..++.++|+||+|++++++++|..||.
T Consensus 132 il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 211 (327)
T cd08227 132 ILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 211 (327)
T ss_pred EEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 578888999999998754432111100 0111245677999999865 357889999999999999999999996
Q ss_pred ccccccccHHHHHHhhcCCcc---------------cchhhhhcc---------c---cchhhhhchHHHHHHHHHHhhh
Q 035782 74 EMFIGEMSLRDWVNKSLSGEL---------------TQVIDANLA---------R---DEQSFFVKMDCLSSIMHLALDC 126 (159)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~---------~---~~~~~~~~~~~~~~~~~l~~~c 126 (159)
....... .........+... +...+.... . .....+........+.+++.+|
T Consensus 212 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 290 (327)
T cd08227 212 DMPATQM-LLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQC 290 (327)
T ss_pred CcchhHH-HHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHH
Confidence 5322111 0000000000000 000000000 0 0000001112345788999999
Q ss_pred cCCCCCCCCcHHHHHH--HHHHHH
Q 035782 127 CMESPDQRIYMTDAAA--KLKKIK 148 (159)
Q Consensus 127 l~~~p~~Rpt~~~ll~--~l~~~~ 148 (159)
|+.||++|||+.++++ .++++.
T Consensus 291 l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 291 LQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred HhhCchhcCCHHHHhcChhhhhcc
Confidence 9999999999999985 344443
No 355
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.72 E-value=1.7e-17 Score=114.92 Aligned_cols=140 Identities=13% Similarity=0.152 Sum_probs=81.9
Q ss_pred CccC-CCCceEEcccccceecCCCCCcc-cccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLD-EDMVAHVSDFGISKLLGDGDDSV-TQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
|+++ .++.+|++|||+++......... ......++..|+|||.+.. ..++.++|+||+|++++++++|..||.....
T Consensus 145 ili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~ 224 (342)
T cd07854 145 VFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE 224 (342)
T ss_pred EEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 3565 45678999999997653211111 1122357888999997654 4577889999999999999999999964321
Q ss_pred ccccHHHHHHhhcCC---cccchh---hhhcc-----ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 78 GEMSLRDWVNKSLSG---ELTQVI---DANLA-----RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~---~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
.. ............ ...... ..... ...............+.+++.+||..||.+|||+++++
T Consensus 225 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 298 (342)
T cd07854 225 LE-QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL 298 (342)
T ss_pred HH-HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHh
Confidence 11 011111000000 000000 00000 00000000112345688999999999999999999998
No 356
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.72 E-value=7.1e-18 Score=127.79 Aligned_cols=117 Identities=20% Similarity=0.225 Sum_probs=74.0
Q ss_pred CCCceEEcccccceecCCCCC--------------cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCC
Q 035782 5 EDMVAHVSDFGISKLLGDGDD--------------SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKK 70 (159)
Q Consensus 5 ~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~ 70 (159)
.++.+|++|||+++....... ........||++|+|||++.+..++.++|||||||+++||+++..
T Consensus 134 ~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~ 213 (793)
T PLN00181 134 EDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVS 213 (793)
T ss_pred ccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCC
Confidence 345677788887764321000 000112357889999999988889999999999999999999877
Q ss_pred CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 71 PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 71 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
|+..... ......... .. +. ..........++.+||+.+|.+||++.|+++
T Consensus 214 ~~~~~~~---~~~~~~~~~--------~~----~~------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 214 SREEKSR---TMSSLRHRV--------LP----PQ------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred chhhHHH---HHHHHHHhh--------cC----hh------hhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 7542110 000000000 00 00 0012234567888999999999999999974
No 357
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.72 E-value=4.7e-17 Score=112.07 Aligned_cols=153 Identities=18% Similarity=0.241 Sum_probs=89.7
Q ss_pred CccCCCCceEEcccccceecCCCCCcc-----cccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSV-----TQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTD 73 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~ 73 (159)
|+++.++.+|++||+.+.......... ......++..|++||++.+. .++.++|+||+|++++++++|..||.
T Consensus 132 ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~ 211 (328)
T cd08226 132 ILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQ 211 (328)
T ss_pred EEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 577888999999998654332111100 00111245679999998663 46789999999999999999999986
Q ss_pred ccccccccHHHHHHhhcC-C----------------------cc-cchhhh----hccccchhhhhchHHHHHHHHHHhh
Q 035782 74 EMFIGEMSLRDWVNKSLS-G----------------------EL-TQVIDA----NLARDEQSFFVKMDCLSSIMHLALD 125 (159)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~-~----------------------~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (159)
....... .......... . .. ...+.. .........+.+......+.+++.+
T Consensus 212 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 290 (328)
T cd08226 212 DMLRTQM-LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVEL 290 (328)
T ss_pred CcChHHH-HHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHH
Confidence 5321111 0000000000 0 00 000000 0000000111123456788999999
Q ss_pred hcCCCCCCCCcHHHHH--HHHHHHHHHhhhh
Q 035782 126 CCMESPDQRIYMTDAA--AKLKKIKEKFLDD 154 (159)
Q Consensus 126 cl~~~p~~Rpt~~~ll--~~l~~~~~~~~~~ 154 (159)
||..||++|||+.+++ ..++.+.++....
T Consensus 291 ~l~~dP~~Rpta~e~l~~~~~~~~~~~~~~~ 321 (328)
T cd08226 291 CLQQDPEKRPSASSLLSHAFFKQVKEQTQGS 321 (328)
T ss_pred HccCCcccCCCHHHHhhCHHHHHHHHhcccc
Confidence 9999999999999997 6677776664443
No 358
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.72 E-value=5.5e-18 Score=123.66 Aligned_cols=138 Identities=17% Similarity=0.145 Sum_probs=77.9
Q ss_pred CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC----------------------ccccchhhHh
Q 035782 1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG----------------------IVSTKCDVYS 57 (159)
Q Consensus 1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~----------------------~~~~~~dv~s 57 (159)
||++. ++.+||+|||+++.+...... ......+++.|+|||.+... .++.++||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred EEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 57774 689999999999865432222 23345789999999954321 2334569999
Q ss_pred HHHHHHHHHhcCCCCcccccccccHHHHHHhhcC--Ccccchhhhhccccch-hhhhchHHHHHHHHHHhhhcCCCCCCC
Q 035782 58 YGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLS--GELTQVIDANLARDEQ-SFFVKMDCLSSIMHLALDCCMESPDQR 134 (159)
Q Consensus 58 ~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~R 134 (159)
+||++++|+++..++.... ..+...+..... ..+...+.+....... ............++++.+|++.||.+|
T Consensus 365 lGviL~el~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR 441 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNL---IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR 441 (566)
T ss_pred HHHHHHHHHhCcCCCchHH---HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence 9999999998665533210 001000100000 0001111110000000 000001122346789999999999999
Q ss_pred CcHHHHHH
Q 035782 135 IYMTDAAA 142 (159)
Q Consensus 135 pt~~~ll~ 142 (159)
||+.++++
T Consensus 442 ~ta~e~L~ 449 (566)
T PLN03225 442 ISAKAALA 449 (566)
T ss_pred CCHHHHhC
Confidence 99999985
No 359
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.72 E-value=2.7e-17 Score=109.06 Aligned_cols=121 Identities=21% Similarity=0.300 Sum_probs=85.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||.+......... .....++..|++||...+...+.++|+|++|++++++++|..||.....
T Consensus 130 i~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~--- 204 (254)
T cd06627 130 ILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP--- 204 (254)
T ss_pred EEECCCCCEEEeccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---
Confidence 56788899999999999876433221 2234578889999998777778899999999999999999999864321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
....... ...... ..+...+..+.+++.+||..+|++|||+.+++.
T Consensus 205 -~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 205 -MAALFRI-VQDDHP--------------PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -HHHHHHH-hccCCC--------------CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1111100 000000 001133557889999999999999999999874
No 360
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.71 E-value=4.2e-17 Score=109.71 Aligned_cols=110 Identities=24% Similarity=0.267 Sum_probs=74.8
Q ss_pred ceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHH-hcCCCCcccccccccHHHH
Q 035782 8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETF-TRKKPTDEMFIGEMSLRDW 85 (159)
Q Consensus 8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~-~~~~p~~~~~~~~~~~~~~ 85 (159)
.+|++|||++...... ....++..|++||.+.+ ..++.++|+||||+++++++ .|..||....... ....
T Consensus 162 ~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~ 233 (274)
T cd05076 162 FIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KERF 233 (274)
T ss_pred eeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HHHH
Confidence 4799999987654221 11346778999998765 45788999999999999985 6888876432111 1111
Q ss_pred HHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 035782 86 VNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKL 144 (159)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l 144 (159)
.... . .. +......+.+++.+||+.+|++|||+.++++.|
T Consensus 234 ~~~~------------~-~~------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 234 YEKK------------H-RL------PEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHhc------------c-CC------CCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1100 0 00 001123578899999999999999999999877
No 361
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.71 E-value=2.7e-17 Score=111.55 Aligned_cols=139 Identities=20% Similarity=0.161 Sum_probs=83.0
Q ss_pred CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
|+++. ++.+||+|||++........ ......+++.|++||++.+. .++.++|+||+|++++++++|..||......
T Consensus 133 ill~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~ 210 (294)
T PLN00009 133 LLIDRRTNALKLADFGLARAFGIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI 210 (294)
T ss_pred EEEECCCCEEEEcccccccccCCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 45663 56799999999976532211 12234578899999987654 5688999999999999999999998643211
Q ss_pred cccHHHHHHh---hcCCcccc---hhhh--hcc--ccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 79 EMSLRDWVNK---SLSGELTQ---VIDA--NLA--RDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 79 ~~~~~~~~~~---~~~~~~~~---~~~~--~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+ ........ .....+.. +.+. ... ...............+.+++.+|++.+|.+||++.+++.
T Consensus 211 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 211 D-ELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred H-HHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 11111100 00000000 0000 000 000000011123456889999999999999999999885
No 362
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=4.4e-17 Score=103.94 Aligned_cols=119 Identities=19% Similarity=0.221 Sum_probs=91.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
+|++.++.+|++|||.+..-. ...+.+.+||.-|.+||...+..++..+|+|++|+..||++.|.+||+... .+.
T Consensus 155 lLlg~~~~lkiAdfGwsV~~p----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~e 229 (281)
T KOG0580|consen 155 LLLGSAGELKIADFGWSVHAP----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSE 229 (281)
T ss_pred hccCCCCCeeccCCCceeecC----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHH
Confidence 578899999999999997643 334566889999999999999999999999999999999999999998643 111
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
.+.......+. .|........+++.+|+..+|.+|.+..|++..
T Consensus 230 tYkrI~k~~~~-------------------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 230 TYKRIRKVDLK-------------------FPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred HHHHHHHcccc-------------------CCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 12111111110 012455678889999999999999999988753
No 363
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.71 E-value=1.5e-17 Score=111.79 Aligned_cols=122 Identities=21% Similarity=0.263 Sum_probs=84.7
Q ss_pred CccCCCCceEEcccccceecCCCCCc------------------ccccccccccccccccccCCCccccchhhHhHHHHH
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS------------------VTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLL 62 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~------------------~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~ 62 (159)
|+++.++.++++|||++......... .......++..|++||+......+.++|+||+|+++
T Consensus 133 i~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l 212 (280)
T cd05581 133 ILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCII 212 (280)
T ss_pred eEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHH
Confidence 57788899999999998765432210 112234567889999998877788899999999999
Q ss_pred HHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcH----H
Q 035782 63 METFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYM----T 138 (159)
Q Consensus 63 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~----~ 138 (159)
+++++|..||..... ......... . .. ..+...+..+.+++.+||+.+|++||++ +
T Consensus 213 ~~l~~g~~p~~~~~~--~~~~~~~~~---~----------~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 272 (280)
T cd05581 213 YQMLTGKPPFRGSNE--YLTFQKILK---L----------EY-----SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYD 272 (280)
T ss_pred HHHHhCCCCCCCccH--HHHHHHHHh---c----------CC-----CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHH
Confidence 999999999875321 000000000 0 00 0011235678899999999999999999 7
Q ss_pred HHHH
Q 035782 139 DAAA 142 (159)
Q Consensus 139 ~ll~ 142 (159)
++++
T Consensus 273 ~ll~ 276 (280)
T cd05581 273 ELKA 276 (280)
T ss_pred HHhc
Confidence 7664
No 364
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.71 E-value=3.7e-17 Score=113.34 Aligned_cols=135 Identities=20% Similarity=0.197 Sum_probs=83.6
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++...... .....++..|+|||.+.+ ..++.++|+||+|++++++++|..||.......
T Consensus 151 Ill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~ 225 (345)
T cd07877 151 LAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 225 (345)
T ss_pred EEEcCCCCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 57888999999999998764321 122457888999998765 457888999999999999999999986432111
Q ss_pred ccHHHHHHhhcCCcccchhh-----------hhccccchhh--hhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVID-----------ANLARDEQSF--FVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.... +..........+.. ..+...+... .........+.+++.+|++.||.+||++.+++.
T Consensus 226 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 226 -QLKL-ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred -HHHH-HHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0000 00000000000000 0000000000 000123456889999999999999999999884
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.71 E-value=2.6e-17 Score=111.36 Aligned_cols=128 Identities=23% Similarity=0.230 Sum_probs=84.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc--cccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI--VSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~--~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
|+++.++.++|+|||+++........ ......|+..|++||...+.. .+.++|+||+|++++++++|..||.....
T Consensus 136 il~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~- 213 (288)
T cd05583 136 ILLDSEGHVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE- 213 (288)
T ss_pred eEECCCCCEEEEECcccccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-
Confidence 57888899999999998765432211 122245788999999876653 67789999999999999999999853211
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
............. ... ..+......+.+++.+||+.||++|||+.++...|+
T Consensus 214 ~~~~~~~~~~~~~------------~~~---~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 214 QNSQSEISRRILK------------SKP---PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred cchHHHHHHHHHc------------cCC---CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 1111111111000 000 001123456788999999999999999877765544
No 366
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.71 E-value=4.5e-18 Score=119.17 Aligned_cols=94 Identities=17% Similarity=0.140 Sum_probs=62.4
Q ss_pred cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhh
Q 035782 32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV 111 (159)
Q Consensus 32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (159)
.+||+.|+|||++.+..++.++|+||+||+++++++|..||....... .+.. +.... ..+ ..+ .
T Consensus 208 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~-i~~~~----~~~------~~p----~ 271 (377)
T cd05629 208 TVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHE-TYRK-IINWR----ETL------YFP----D 271 (377)
T ss_pred cCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHH-HHHH-HHccC----Ccc------CCC----C
Confidence 468999999999988888999999999999999999999996532111 0000 10000 000 000 0
Q ss_pred chHHHHHHHHHHhhhcCCCCCCC---CcHHHHHH
Q 035782 112 KMDCLSSIMHLALDCCMESPDQR---IYMTDAAA 142 (159)
Q Consensus 112 ~~~~~~~~~~l~~~cl~~~p~~R---pt~~~ll~ 142 (159)
.......+.+++.+|+. +|.+| +++.+++.
T Consensus 272 ~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 272 DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 01234567788999997 66665 59998885
No 367
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.71 E-value=4.6e-17 Score=109.83 Aligned_cols=139 Identities=18% Similarity=0.166 Sum_probs=85.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++........ ......++..|++||.+.+. .++.++|+|++|++++++++|..||......+
T Consensus 131 i~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~ 208 (284)
T cd07836 131 LLINKRGELKLADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED 208 (284)
T ss_pred EEECCCCcEEEeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 5788899999999999976532211 12234567889999987654 46788999999999999999999987543211
Q ss_pred ccHHHHHHhhc---CCcccchhh-hhcccc-c----hh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSL---SGELTQVID-ANLARD-E----QS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~---~~~~~~~~~-~~~~~~-~----~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.......... ...+..+.. +..... + .. .......+..+.+++.+||+.||.+||++.+++.
T Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 209 -QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred -HHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111111100 000000000 000000 0 00 0001123566889999999999999999999874
No 368
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.71 E-value=2.9e-17 Score=107.98 Aligned_cols=123 Identities=28% Similarity=0.313 Sum_probs=85.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||.+....... ......++..|++||......++.++|+|++|++++++++|..||...... .
T Consensus 118 i~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-~ 193 (244)
T smart00220 118 ILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-L 193 (244)
T ss_pred eEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-H
Confidence 567888999999999998764322 222345788899999988777888999999999999999999998542111 1
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
........... ..... ....+..+.+++.+||..+|++||++.++++
T Consensus 194 ~~~~~~~~~~~-----------~~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 194 ELFKKIGKPKP-----------PFPPP----EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHhccCC-----------CCccc----cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 11111110000 00000 0014457889999999999999999999986
No 369
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.71 E-value=2.3e-17 Score=113.07 Aligned_cols=73 Identities=29% Similarity=0.386 Sum_probs=62.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
||+|..|++||+|||+++.---.+ ....+.+|||-|+|||++...+|+.++|.|+||+++|||+.|++||.+.
T Consensus 481 vmLd~eGHiKi~DFGmcKEni~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 481 VMLDSEGHIKIADFGMCKENIFDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred eEeccCCceEeeecccccccccCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 588999999999999997532111 1233478999999999999999999999999999999999999999764
No 370
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.71 E-value=1.9e-17 Score=124.91 Aligned_cols=124 Identities=23% Similarity=0.279 Sum_probs=82.4
Q ss_pred CccCCCCceEEcccccceecC----------------CCCCcccccccccccccccccccCCC---ccccchhhHhHHHH
Q 035782 1 ILLDEDMVAHVSDFGISKLLG----------------DGDDSVTQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVL 61 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~----------------~~~~~~~~~~~~gt~~~~~pe~~~~~---~~~~~~dv~s~g~~ 61 (159)
|.++.++.|||+|||++.... .+......++.+||--|.|||.+.+. +|+.+.|+||+|++
T Consensus 728 IFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIV 807 (1351)
T KOG1035|consen 728 IFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIV 807 (1351)
T ss_pred eEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHH
Confidence 678999999999999998621 01112245667899999999987765 49999999999999
Q ss_pred HHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 62 LMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 62 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
++||+. ||... +.-...+. .+.+..+... .. -.....+.-.+++.++++.||++|||+.|+|
T Consensus 808 lFEM~y---PF~Ts----MERa~iL~--------~LR~g~iP~~-~~--f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 808 LFEMLY---PFGTS----MERASILT--------NLRKGSIPEP-AD--FFDPEHPEEASLIRWLLSHDPSKRPTATELL 869 (1351)
T ss_pred HHHHhc---cCCch----HHHHHHHH--------hcccCCCCCC-cc--cccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence 999974 34321 11011111 1111111111 00 0123455667899999999999999999998
Q ss_pred H
Q 035782 142 A 142 (159)
Q Consensus 142 ~ 142 (159)
+
T Consensus 870 ~ 870 (1351)
T KOG1035|consen 870 N 870 (1351)
T ss_pred h
Confidence 4
No 371
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.70 E-value=4.6e-18 Score=118.46 Aligned_cols=75 Identities=28% Similarity=0.367 Sum_probs=59.3
Q ss_pred CccCCCCceEEcccccceecCCCCCc---------------------------------ccccccccccccccccccCCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS---------------------------------VTQTMTMATIGYMAPEYGSEG 47 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------~~~~~~~gt~~~~~pe~~~~~ 47 (159)
||++.++.+||+|||++......... ......+||+.|+|||++.+.
T Consensus 132 Ili~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~ 211 (360)
T cd05627 132 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT 211 (360)
T ss_pred EEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC
Confidence 67899999999999998754211100 001134689999999999888
Q ss_pred ccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 48 IVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 48 ~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
.++.++|+||+||+++++++|..||...
T Consensus 212 ~~~~~~DiwSlGvilyel~tG~~Pf~~~ 239 (360)
T cd05627 212 GYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (360)
T ss_pred CCCCcceeccccceeeecccCCCCCCCC
Confidence 8999999999999999999999998653
No 372
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.70 E-value=5.5e-17 Score=108.47 Aligned_cols=123 Identities=20% Similarity=0.100 Sum_probs=83.9
Q ss_pred CccCCCCceEEcccccceecCCCCC-cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.++|+|||+++....... ........++..|+|||.+.+..++.++|+||+|++++++++|..||......
T Consensus 137 i~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~- 215 (264)
T cd06653 137 ILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM- 215 (264)
T ss_pred EEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH-
Confidence 5678889999999999976532111 11112345788999999988877888999999999999999999998643111
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.. +.+..... .....+......+.+++.+||+ +|..||++.+++.
T Consensus 216 ---~~-~~~~~~~~-------------~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 216 ---AA-IFKIATQP-------------TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ---HH-HHHHHcCC-------------CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 00 11100000 0001122445678899999999 5799999998764
No 373
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.69 E-value=2.1e-17 Score=114.00 Aligned_cols=127 Identities=19% Similarity=0.226 Sum_probs=81.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
||++.++.+||+|||++........ .......||+.|+|||++. ...++.++|+||+|++++++++|..||...
T Consensus 133 ili~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 133 ILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred EEECCCCCEEEeecchheecccCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 5788999999999999876532221 1223356899999999875 235788999999999999999999998643
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAAK 143 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~~ 143 (159)
.. ............+ . ..+ .........+.+++.+|+..++.+ |+++.++++.
T Consensus 212 ~~-----~~~~~~i~~~~~~-~------~~p---~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 212 SL-----VETYGKIMNHKER-F------QFP---AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CH-----HHHHHHHhCCCcc-c------cCC---CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 21 1111111110000 0 000 001134556778888888655444 6889888754
No 374
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.69 E-value=1.4e-16 Score=106.25 Aligned_cols=119 Identities=20% Similarity=0.231 Sum_probs=82.0
Q ss_pred ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccccccc
Q 035782 2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMS 81 (159)
Q Consensus 2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~ 81 (159)
+++ ++.+||+|||++........ ......|++.|++||...+..++.++|+||+|++++++++|..||.....
T Consensus 138 li~-~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~---- 210 (260)
T cd08222 138 FLK-NNLLKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF---- 210 (260)
T ss_pred Eee-cCCEeecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----
Confidence 444 45699999999877543222 12234578889999988777788889999999999999999999853211
Q ss_pred HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 82 LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
............. ..+...+..+.+++.+||..+|++||++.++++
T Consensus 211 -~~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 211 -LSVVLRIVEGPTP--------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -HHHHHHHHcCCCC--------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 1111110000000 011245567889999999999999999999875
No 375
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.69 E-value=4.4e-17 Score=107.95 Aligned_cols=117 Identities=26% Similarity=0.244 Sum_probs=82.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++|+|||++........ ......++..|++||...+...+.++|+|++|++++++++|..||.....
T Consensus 124 i~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--- 198 (250)
T cd05123 124 ILLDADGHIKLTDFGLAKELSSEGS--RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--- 198 (250)
T ss_pred EEEcCCCcEEEeecCcceecccCCC--cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---
Confidence 5678889999999999877543221 12334578889999998877788899999999999999999999864321
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTD 139 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ 139 (159)
........... ...+...+..+.+++.+||..||++||++.+
T Consensus 199 --~~~~~~~~~~~---------------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 199 --KEIYEKILKDP---------------LRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred --HHHHHHHhcCC---------------CCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 11111100000 0011122456788999999999999999943
No 376
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.68 E-value=7.9e-17 Score=111.62 Aligned_cols=141 Identities=16% Similarity=0.147 Sum_probs=86.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-CccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
|+++.++.+||+|||++...... .....+++.|++||.+.+ ..++.++|+||+|++++++++|..||.......
T Consensus 149 ill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 223 (343)
T cd07880 149 LAVNEDCELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD 223 (343)
T ss_pred EEEcCCCCEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 57788999999999998765321 122356788999998765 357888999999999999999999986432111
Q ss_pred ccHHHHHHhh-----------cCCcccchhhhhccccchh-hhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH--HHHH
Q 035782 80 MSLRDWVNKS-----------LSGELTQVIDANLARDEQS-FFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA--AKLK 145 (159)
Q Consensus 80 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll--~~l~ 145 (159)
......... ................... ..........+.+++.+|++.||++|||+.+++ ..++
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~ 302 (343)
T cd07880 224 -QLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFE 302 (343)
T ss_pred -HHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHh
Confidence 111111100 0000000000000000000 000113345688999999999999999999998 4444
Q ss_pred HH
Q 035782 146 KI 147 (159)
Q Consensus 146 ~~ 147 (159)
..
T Consensus 303 ~~ 304 (343)
T cd07880 303 EF 304 (343)
T ss_pred hh
Confidence 43
No 377
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.68 E-value=4.6e-17 Score=112.29 Aligned_cols=127 Identities=19% Similarity=0.223 Sum_probs=79.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
||++.++.+||+|||++......... ......||+.|+|||++.. ..++.++|+||+|++++++++|..||...
T Consensus 133 ill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 133 VLLDKNGHIRLADFGSCLRLLADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred EEECCCCCEEEEECCceeecCCCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 57889999999999998765432221 1223468999999998753 34678899999999999999999998643
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCC--CCCCcHHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESP--DQRIYMTDAAAK 143 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p--~~Rpt~~~ll~~ 143 (159)
.. .+........ ..... +.. .....+..+.+++.+|+..++ ..|+++.++++.
T Consensus 212 ~~-----~~~~~~i~~~--~~~~~--~~~------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 212 SL-----VETYGKIMNH--KEHFQ--FPP------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CH-----HHHHHHHHcC--CCccc--CCC------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 21 1111111000 00000 000 001234566777777665444 347899888854
No 378
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.67 E-value=3.7e-17 Score=112.75 Aligned_cols=126 Identities=19% Similarity=0.251 Sum_probs=80.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
||++.++.+||+|||++........ .......|++.|+|||++.+ ..++.++|+||+|++++++++|..||...
T Consensus 133 ill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 133 VLLDMNGHIRLADFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred EEEcCCCCEEEEeccceeeccCCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 5788999999999999987643222 12233568999999998765 35678899999999999999999998643
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCC--CCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQ--RIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~~ll~ 142 (159)
.. ............+ . .+ +. ...+.+..+.+++.+|+..++.+ |+++.++++
T Consensus 212 ~~-----~~~~~~i~~~~~~-~---~~---p~---~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 212 SL-----VETYGKIMNHEER-F---QF---PS---HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred CH-----HHHHHHHHcCCCc-c---cC---CC---ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 21 1111111100000 0 00 00 00123456788898988866544 467887764
No 379
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.67 E-value=1.5e-16 Score=107.73 Aligned_cols=125 Identities=23% Similarity=0.258 Sum_probs=82.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC--ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
||++.++.+||+|||++......... ......|+..|++||.+... .++.++|+||+|++++++++|..||......
T Consensus 136 il~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~ 214 (290)
T cd05613 136 ILLDSNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK 214 (290)
T ss_pred eEECCCCCEEEeeCccceeccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc
Confidence 67889999999999999765432211 12234578899999987653 4577899999999999999999998532111
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI-----YMTDAAA 142 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----t~~~ll~ 142 (159)
........... ...+ +.+......+.+++.+||..||++|| ++.+++.
T Consensus 215 -~~~~~~~~~~~------------~~~~---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 215 -NSQAEISRRIL------------KSEP---PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -ccHHHHHHHhh------------ccCC---CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 11111111100 0000 01123455788999999999999997 6677764
No 380
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.67 E-value=1e-16 Score=105.66 Aligned_cols=109 Identities=21% Similarity=0.188 Sum_probs=77.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|+++.++.++++|||.+....... ....++..|++||...+..++.++|+||+|++++++++|..++......
T Consensus 116 il~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-- 188 (237)
T cd05576 116 ILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-- 188 (237)
T ss_pred EEEcCCCCEEEecccchhcccccc-----ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--
Confidence 578889999999999886653221 1234567799999988777888999999999999999998775431100
Q ss_pred cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 81 SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
....... ..+......+.+++.+||+.||++||++.
T Consensus 189 -------------~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 189 -------------INTHTTL---------NIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred -------------ccccccc---------CCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 0000000 01113445688899999999999999963
No 381
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.66 E-value=7.7e-18 Score=117.93 Aligned_cols=74 Identities=22% Similarity=0.213 Sum_probs=59.0
Q ss_pred CccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
||++ ....+||||||.|.....++.. ...-+..|.|||++.+.+|....|+||.||++||+.+|+..|.+...+
T Consensus 567 iLVNE~k~iLKLCDfGSA~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN 641 (752)
T KOG0670|consen 567 ILVNESKNILKLCDFGSASFASENEIT----PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN 641 (752)
T ss_pred eEeccCcceeeeccCcccccccccccc----HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence 4566 3467899999999877544422 123466799999999999999999999999999999999998875443
No 382
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.66 E-value=3.6e-16 Score=106.56 Aligned_cols=92 Identities=18% Similarity=0.256 Sum_probs=68.3
Q ss_pred cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhh
Q 035782 32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV 111 (159)
Q Consensus 32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (159)
++||..|+|||++.+.+++.++|.|+||+++|||+.|..||.+.... .. +..++.+.+ .++.
T Consensus 295 FVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~-~T------------l~NIv~~~l-----~Fp~ 356 (459)
T KOG0610|consen 295 FVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNK-ET------------LRNIVGQPL-----KFPE 356 (459)
T ss_pred cccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCch-hh------------HHHHhcCCC-----cCCC
Confidence 56999999999999999999999999999999999999999763221 11 112222111 1111
Q ss_pred chHHHHHHHHHHhhhcCCCCCCCCc----HHHHH
Q 035782 112 KMDCLSSIMHLALDCCMESPDQRIY----MTDAA 141 (159)
Q Consensus 112 ~~~~~~~~~~l~~~cl~~~p~~Rpt----~~~ll 141 (159)
.......+.+|+++.|..||.+|.- +.||.
T Consensus 357 ~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 357 EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred CCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 1245577899999999999999988 66664
No 383
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.65 E-value=2.8e-16 Score=105.38 Aligned_cols=120 Identities=20% Similarity=0.272 Sum_probs=83.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccc--cc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMF--IG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~--~~ 78 (159)
+|+|..|++||+|+|+++.-...+ ...++.+|||-|+|||++.+..|..++|.|++|++++||..|+.||.-.. +.
T Consensus 382 vlldaeghikltdygmcke~l~~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~ 459 (593)
T KOG0695|consen 382 VLLDAEGHIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP 459 (593)
T ss_pred eEEccCCceeecccchhhcCCCCC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCc
Confidence 588999999999999997643222 23456899999999999999999999999999999999999999997433 22
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY 136 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt 136 (159)
+.....+..+. ++.+.+.. |....-....+++.-++.||.+|.-
T Consensus 460 d~ntedylfqv-------ilekqiri-------prslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 460 DMNTEDYLFQV-------ILEKQIRI-------PRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred ccchhHHHHHH-------Hhhhcccc-------cceeehhhHHHHHHhhcCCcHHhcC
Confidence 23332322211 11111111 0112223455778888899988854
No 384
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.64 E-value=3.5e-16 Score=108.71 Aligned_cols=132 Identities=14% Similarity=0.079 Sum_probs=86.1
Q ss_pred CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc----ccc
Q 035782 6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG----EMS 81 (159)
Q Consensus 6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~----~~~ 81 (159)
+-.+||+|||.|+.+.. +.+.-+.|..|++||++.+.+|+..+|+||++|+.||+++|-..|+--... +..
T Consensus 390 di~vKIaDlGNACW~~k-----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDED 464 (590)
T KOG1290|consen 390 DIRVKIADLGNACWVHK-----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDED 464 (590)
T ss_pred ceeEEEeeccchhhhhh-----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHH
Confidence 35789999999988632 344467889999999999999999999999999999999998777532211 111
Q ss_pred -H---HHHHHhhc------CCcccchhhh--------hccccch-h-----hhhchHHHHHHHHHHhhhcCCCCCCCCcH
Q 035782 82 -L---RDWVNKSL------SGELTQVIDA--------NLARDEQ-S-----FFVKMDCLSSIMHLALDCCMESPDQRIYM 137 (159)
Q Consensus 82 -~---~~~~~~~~------~~~~~~~~~~--------~~~~~~~-~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~ 137 (159)
+ .+...... ....++++.. .++..+- . -.-+.+...++.+++.-||+.+|.+|||+
T Consensus 465 HiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA 544 (590)
T KOG1290|consen 465 HIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTA 544 (590)
T ss_pred HHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccH
Confidence 1 11100000 0001111110 0111100 0 01134567789999999999999999999
Q ss_pred HHHHH
Q 035782 138 TDAAA 142 (159)
Q Consensus 138 ~~ll~ 142 (159)
.+.++
T Consensus 545 ~~cl~ 549 (590)
T KOG1290|consen 545 AQCLK 549 (590)
T ss_pred HHHhc
Confidence 99883
No 385
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.63 E-value=1.6e-16 Score=112.60 Aligned_cols=119 Identities=22% Similarity=0.274 Sum_probs=87.3
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
||++.+..+||+|||++.++..+ ......+|++.|.|||+..+..| .+.+|+|++|+++|.+++|..||.+...
T Consensus 186 ilL~~~mnikIaDfgfS~~~~~~---~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-- 260 (596)
T KOG0586|consen 186 ILLDENMNIKIADFGFSTFFDYG---LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-- 260 (596)
T ss_pred cccccccceeeeccccceeeccc---ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc--
Confidence 67888889999999999988532 23455789999999999998876 5779999999999999999999975322
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+.+..+-+.+..+ .+.-....+-+++++++..+|++|+++.++-+
T Consensus 261 ---------------k~Lr~rvl~gk~r---Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 261 ---------------KELRPRVLRGKYR---IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ---------------ccccchheeeeec---ccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 1111111111111 01123345777899999999999999988763
No 386
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.62 E-value=6e-17 Score=118.32 Aligned_cols=117 Identities=25% Similarity=0.325 Sum_probs=82.3
Q ss_pred CCceEEcccccceecCCCCC-cccccccccccccccccccCCCccccchhhHhHHHHHHHHHhc-CCCCcccccccccHH
Q 035782 6 DMVAHVSDFGISKLLGDGDD-SVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTR-KKPTDEMFIGEMSLR 83 (159)
Q Consensus 6 ~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~-~~p~~~~~~~~~~~~ 83 (159)
...++|+|||+|+.+..+.. ..+..+..||-+|+|||.+....-+.++|++|+||++|.+++| .+||......+.+.
T Consensus 647 ~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI- 725 (903)
T KOG1027|consen 647 TLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI- 725 (903)
T ss_pred ceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhh-
Confidence 35789999999998764433 2334567799999999999888778899999999999999886 78886532211100
Q ss_pred HHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 84 DWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
+ .....+.. +.+. .++ ...+|+.+|++.+|..||++.+|+
T Consensus 726 ------l-~~~~~L~~--L~~~-------~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 726 ------L-TGNYTLVH--LEPL-------PDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred ------h-cCccceee--eccC-------chH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 0 00000000 0010 122 678899999999999999999998
No 387
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.61 E-value=3.1e-16 Score=102.46 Aligned_cols=140 Identities=21% Similarity=0.242 Sum_probs=87.9
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
+|++.|..+||||||+++.... +...+.+..+-|-.|.|||.+.+. .|+.+.||||.||++.|++.++..|+...+-
T Consensus 187 LLVNSNCvLKICDFGLARvee~-d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi- 264 (449)
T KOG0664|consen 187 LLVNSNCILKICDFGLARTWDQ-RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI- 264 (449)
T ss_pred EEeccCceEEecccccccccch-hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH-
Confidence 3678888999999999998643 333344455667889999999887 6899999999999999999988888753321
Q ss_pred ccHHHHHHhhcC------------Ccccchhhhhcc-c---cchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 80 MSLRDWVNKSLS------------GELTQVIDANLA-R---DEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 80 ~~~~~~~~~~~~------------~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
...+.+-.... +....++....+ + ..+....+.+.-.....+...++..||++|.+..+.+..
T Consensus 265 -qQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 265 -EQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred -HHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 11111111110 111111111111 0 011111122333456677888999999999998877643
No 388
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.61 E-value=3.3e-15 Score=92.21 Aligned_cols=139 Identities=17% Similarity=0.122 Sum_probs=87.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc-cccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
+||+.+|.+|++|||+++.++-... ..+..+-|.+|.+|.++.+.+ |+.+.|+||.||++.|+.. |.+.|.+....
T Consensus 132 llin~ngelkladfglarafgipvr--cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd 209 (292)
T KOG0662|consen 132 LLINRNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209 (292)
T ss_pred EEeccCCcEEecccchhhhcCCceE--eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence 4789999999999999998864332 234455789999999988875 7899999999999999986 55556554322
Q ss_pred cccHHHHHHhhc---CCcc---cchhhhhccccchhhhhch----HHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 79 EMSLRDWVNKSL---SGEL---TQVIDANLARDEQSFFVKM----DCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 79 ~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+ .+...++..- ...| ..+-+...-+..+...... .....-.+++.+.+.-+|.+|+++++.++
T Consensus 210 d-qlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 210 D-QLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred H-HHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 2 2222221111 1111 1121211111111111111 22234567888888889999999998764
No 389
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.60 E-value=2.1e-15 Score=99.98 Aligned_cols=135 Identities=18% Similarity=0.145 Sum_probs=86.2
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
|++..+..+||.|||+++.-... ..-+-.+.+..|.|||+..+..+...+|+||.||++.||+.|...|.+. .
T Consensus 149 ivv~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~----d 221 (369)
T KOG0665|consen 149 IVVNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK----D 221 (369)
T ss_pred ceecchhheeeccchhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc----h
Confidence 57788899999999999764211 2333356788899999999988999999999999999999999877632 2
Q ss_pred cHHHHHHhh--cCCcccchhhhh-------ccc------------cch-----hhhhchHHHHHHHHHHhhhcCCCCCCC
Q 035782 81 SLRDWVNKS--LSGELTQVIDAN-------LAR------------DEQ-----SFFVKMDCLSSIMHLALDCCMESPDQR 134 (159)
Q Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~-------~~~------------~~~-----~~~~~~~~~~~~~~l~~~cl~~~p~~R 134 (159)
...+|.... .......+.++. +.. .+. ......-......+++.+||..||++|
T Consensus 222 ~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~R 301 (369)
T KOG0665|consen 222 HIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKR 301 (369)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhc
Confidence 222221100 000000000000 000 000 001111223457889999999999999
Q ss_pred CcHHHHHH
Q 035782 135 IYMTDAAA 142 (159)
Q Consensus 135 pt~~~ll~ 142 (159)
.++.++|.
T Consensus 302 isv~daL~ 309 (369)
T KOG0665|consen 302 ISVDDALR 309 (369)
T ss_pred ccHHHHhc
Confidence 99999884
No 390
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.60 E-value=7.5e-16 Score=113.22 Aligned_cols=122 Identities=19% Similarity=0.260 Sum_probs=89.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEM 75 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~ 75 (159)
||++.++.|||.|||++..... ....+.+.+|||.|||||++. ...|+..+|+||+|++-.|+.-|.+|+..+
T Consensus 154 iLLT~e~~VKLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm 231 (953)
T KOG0587|consen 154 VLLTENAEVKLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM 231 (953)
T ss_pred EEEeccCcEEEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc
Confidence 6889999999999999987642 223456678999999999753 224778899999999999999999997543
Q ss_pred ccccccHHHHHHhhcCCcccchhhhhccccc-hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 76 FIGEMSLRDWVNKSLSGELTQVIDANLARDE-QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
-+. +.++. +...| ...-.+.....++-+++..|+..|-.+||+..++++
T Consensus 232 HPm----------------raLF~--IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 232 HPM----------------RALFL--IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred chh----------------hhhcc--CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 211 11111 11111 112224567778999999999999999999999883
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.60 E-value=7.4e-16 Score=96.76 Aligned_cols=73 Identities=34% Similarity=0.444 Sum_probs=58.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC----CccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE----GIVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~----~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
|||+..|+||+||||.+..+.+. ...+.-.|-..|+|||.+.. ..|+.++||||+|+++.|+..++.||....
T Consensus 180 iLIn~~GqVKiCDFGIsG~L~dS---iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 180 ILINYDGQVKICDFGISGYLVDS---IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred EEEccCCcEEEcccccceeehhh---hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 68999999999999999876432 22232346678999997543 378999999999999999999999987543
No 392
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=7.5e-16 Score=112.74 Aligned_cols=131 Identities=15% Similarity=0.178 Sum_probs=93.1
Q ss_pred CccCCCCceEEcccccceecCCCCCc--ccccccccccccccccccCCCcccc-chhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS--VTQTMTMATIGYMAPEYGSEGIVST-KCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~~~~pe~~~~~~~~~-~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
+++..+|.+||+|||.+..+....+. ......+|+.+|+|||++.+..|.+ ..||||.|+++..|..|+.||.....
T Consensus 451 ll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~ 530 (601)
T KOG0590|consen 451 LLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKK 530 (601)
T ss_pred EEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccc
Confidence 46778899999999999877543333 4455678999999999999888754 59999999999999999999987655
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.+..+.. ... ....... ..........+.....++.++++.||.+|.|+++|++
T Consensus 531 ~~~~~~~---~~~-~~~~~~~-------~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 531 SDNSFKT---NNY-SDQRNIF-------EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccchhh---hcc-ccccccc-------cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 4443200 000 0000000 0011112245667888999999999999999999984
No 393
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.57 E-value=6.3e-17 Score=113.89 Aligned_cols=113 Identities=15% Similarity=0.197 Sum_probs=77.8
Q ss_pred ceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHH
Q 035782 8 VAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVN 87 (159)
Q Consensus 8 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 87 (159)
++||||||+|++++.. ..+..++|||.|+|||++.+..|+.+.|+||.|+++|..++|..||.....-.........
T Consensus 705 QvKlCDFGfARiIgEk---sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF 781 (888)
T KOG4236|consen 705 QVKLCDFGFARIIGEK---SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF 781 (888)
T ss_pred ceeeccccceeecchh---hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc
Confidence 7899999999998532 2344578999999999999999999999999999999999999999753221111111111
Q ss_pred hhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 88 KSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
.+.+..|. +......+++...++..-.+|-|....+
T Consensus 782 MyPp~PW~------------------eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 782 MYPPNPWS------------------EISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred ccCCCchh------------------hcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 11111121 3445566677777777777777765443
No 394
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=6.3e-15 Score=111.07 Aligned_cols=73 Identities=26% Similarity=0.470 Sum_probs=61.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC-----CccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
||+|..|++||+|||.|-.+...+ .......+|||-|++||++.. +.|+...|.||+|+++|||+.|..||..
T Consensus 206 vLld~~GHikLADFGsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 206 VLLDKSGHIKLADFGSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred eEecccCcEeeccchhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 689999999999999998875333 334455789999999998653 3588999999999999999999999975
No 395
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.50 E-value=8.4e-15 Score=101.59 Aligned_cols=122 Identities=25% Similarity=0.324 Sum_probs=80.7
Q ss_pred CCceEEcccccceecCCCCCccc-----ccccccccccccccccCCC----ccccchhhHhHHHHHHHHHhcCCCCcccc
Q 035782 6 DMVAHVSDFGISKLLGDGDDSVT-----QTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTRKKPTDEMF 76 (159)
Q Consensus 6 ~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~gt~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~~~~p~~~~~ 76 (159)
.|.+||+|||+++++.+...... .+...||.||++||.+.-. +.+.++||||.|+++|..+.|+.||....
T Consensus 609 cGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq 688 (775)
T KOG1151|consen 609 CGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ 688 (775)
T ss_pred cceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch
Confidence 47889999999999864433221 2345699999999965432 57789999999999999999999986532
Q ss_pred cccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 77 IGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
.. ...... ..+ +....-.++..+........++++||.+.-.+|....++-
T Consensus 689 sQ----QdILqe------NTI----lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 689 SQ----QDILQE------NTI----LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hH----HHHHhh------hch----hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 11 111110 001 1111112222234455677899999999999998876654
No 396
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=4e-14 Score=101.93 Aligned_cols=80 Identities=28% Similarity=0.370 Sum_probs=63.4
Q ss_pred CccCCCCceEEcccccceecC--CCCCcc--------------------------------------ccccccccccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLG--DGDDSV--------------------------------------TQTMTMATIGYMA 40 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~--~~~~~~--------------------------------------~~~~~~gt~~~~~ 40 (159)
||||.+|++||+|||+|.-++ ++..+. ..+..+||+-|+|
T Consensus 760 ILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyia 839 (1034)
T KOG0608|consen 760 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIA 839 (1034)
T ss_pred eEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccC
Confidence 799999999999999997542 110000 0112459999999
Q ss_pred ccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccc
Q 035782 41 PEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM 80 (159)
Q Consensus 41 pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~ 80 (159)
||++...+++...|.|+.|++++||+.|+.||....+++.
T Consensus 840 pevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 840 PEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGET 879 (1034)
T ss_pred hHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcc
Confidence 9999999999999999999999999999999987665554
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.46 E-value=1.6e-13 Score=98.88 Aligned_cols=134 Identities=19% Similarity=0.195 Sum_probs=77.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCc----------------------cccchhhHhH
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGI----------------------VSTKCDVYSY 58 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~----------------------~~~~~dv~s~ 58 (159)
||++.++.+||+|||++..+...... ......+++.|++||.+.... .....|+||+
T Consensus 340 ILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSl 418 (507)
T PLN03224 340 LLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTA 418 (507)
T ss_pred EEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhH
Confidence 57888899999999999765332211 111223578999999764321 1124799999
Q ss_pred HHHHHHHHhcCC-CCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCC---CCC
Q 035782 59 GVLLMETFTRKK-PTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESP---DQR 134 (159)
Q Consensus 59 g~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p---~~R 134 (159)
|+++++|+.+.. |+............+ ........ ...................++++.+++..+| .+|
T Consensus 419 Gvil~em~~~~l~p~~~~~~f~~~~~~~-----~~~~~~~r--~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~R 491 (507)
T PLN03224 419 GVLLMQMCVPELRPVANIRLFNTELRQY-----DNDLNRWR--MYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGR 491 (507)
T ss_pred HHHHHHHHhCCCCCccchhhhhhHHhhc-----cchHHHHH--hhcccCCCcccccccChHHHHHHHHHhccCCCCcccC
Confidence 999999999874 654321111111100 00000000 0000011111122345678999999999766 689
Q ss_pred CcHHHHHH
Q 035782 135 IYMTDAAA 142 (159)
Q Consensus 135 pt~~~ll~ 142 (159)
+|+.|++.
T Consensus 492 lSa~eaL~ 499 (507)
T PLN03224 492 LSVGQALS 499 (507)
T ss_pred CCHHHHhC
Confidence 99999985
No 398
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.44 E-value=2.1e-13 Score=96.70 Aligned_cols=138 Identities=22% Similarity=0.339 Sum_probs=89.8
Q ss_pred ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC---c----cccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG---I----VSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~---~----~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
++|.++.+|++|||+.............+...-...|.|||.+... . .+.+.|+||||++++|++.++.||..
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 5788899999999998776321111111112234469999987653 1 35679999999999999999999986
Q ss_pred cccccc--cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 75 MFIGEM--SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 75 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
...... .....+.. .....+.+.+... .+..+.+..++..||..+|.+||++.++-..++.+...
T Consensus 161 ~~~~~~~~eii~~~~~----~~~~~~rP~i~~~-------~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 161 RNLVEDPDEIILRVKK----GGSNPFRPSIELL-------NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccccCChHHHHHHHHh----cCCCCcCcchhhh-------hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 443222 11122222 1111122212111 13344789999999999999999999999888887763
No 399
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.39 E-value=4.1e-13 Score=88.09 Aligned_cols=97 Identities=21% Similarity=0.216 Sum_probs=70.7
Q ss_pred cccccccccccCCCc---cccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhh
Q 035782 34 ATIGYMAPEYGSEGI---VSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFF 110 (159)
Q Consensus 34 gt~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (159)
-+|.|++||.+...+ .-.++|+|||++++||+.++..||....+.+....-.. ..++..
T Consensus 348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial-----eglrv~------------- 409 (448)
T KOG0195|consen 348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL-----EGLRVH------------- 409 (448)
T ss_pred cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-----cccccc-------------
Confidence 367899999887654 23579999999999999999999987544332211100 011111
Q ss_pred hchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 111 VKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 111 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
.|+.......++|.-|++.||.+||.+..++.+|++++
T Consensus 410 ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 410 IPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred CCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 12355667888999999999999999999999998864
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.38 E-value=2e-13 Score=98.50 Aligned_cols=124 Identities=19% Similarity=0.244 Sum_probs=85.3
Q ss_pred CccCCCCceEEcccccceecCCCCCccccccccccccccccccc---CCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG---SEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~---~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
||+.+.|.+|++|||.+..+. .....+..++||+.|+|||+. ....|+...|+|+.|+.--|+...++|--
T Consensus 143 illtd~gDvklaDfgvsaqit--ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplf---- 216 (829)
T KOG0576|consen 143 ILLTDEGDVKLADFGVSAQIT--ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLF---- 216 (829)
T ss_pred eeecccCceeecccCchhhhh--hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccc----
Confidence 688899999999999987653 233344557899999999963 44578999999999998888877666521
Q ss_pred ccccH-HHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSL-RDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
+... +...-...+ . ..+..+..+....+.+.++++.|+-.+|.+||+++.++.
T Consensus 217 -dlhpmr~l~LmTkS-~----------~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 217 -DLHPMRALFLMTKS-G----------FQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -ccchHHHHHHhhcc-C----------CCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1111 111111110 0 111112223456778999999999999999999998774
No 401
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.38 E-value=1.1e-12 Score=84.31 Aligned_cols=90 Identities=31% Similarity=0.441 Sum_probs=71.3
Q ss_pred CccCC-CCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 1 ILLDE-DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 1 ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
|+++. ++.++|+|||.+........ ......+...|.+||..... ..+.+.|+|++|++++++
T Consensus 123 i~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------- 187 (215)
T cd00180 123 ILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------- 187 (215)
T ss_pred EEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------
Confidence 45666 78999999999987643221 11223467789999988776 677889999999999987
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
..+.+++..|+..+|++||++.++++.
T Consensus 188 --------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 357889999999999999999998864
No 402
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.36 E-value=3.3e-13 Score=94.83 Aligned_cols=111 Identities=22% Similarity=0.322 Sum_probs=74.7
Q ss_pred CCCCceEEcccccceecCCCC----CcccccccccccccccccccCCCccccchhhHhHHHHHHHHHh-cCCCCcccccc
Q 035782 4 DEDMVAHVSDFGISKLLGDGD----DSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-RKKPTDEMFIG 78 (159)
Q Consensus 4 ~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-~~~p~~~~~~~ 78 (159)
..+..+||+|||+.....+.. .....+...||.+|++||.+.+..|+.++|+|++|++++|++. -...++.+..
T Consensus 390 ~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t- 468 (516)
T KOG1033|consen 390 SDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIAT- 468 (516)
T ss_pred ccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHh-
Confidence 345679999999988765444 2334556679999999999999999999999999999999987 3333322110
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCc
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIY 136 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt 136 (159)
...+.+..+.+. .....+.-..++..++...|.+||+
T Consensus 469 ---------------~~d~r~g~ip~~------~~~d~p~e~~ll~~lls~~p~~RP~ 505 (516)
T KOG1033|consen 469 ---------------LTDIRDGIIPPE------FLQDYPEEYTLLQQLLSPSPEERPS 505 (516)
T ss_pred ---------------hhhhhcCCCChH------HhhcCcHHHHHHHHhcCCCcccCch
Confidence 011111111110 0122234566889999999999994
No 403
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.35 E-value=1.7e-12 Score=94.12 Aligned_cols=138 Identities=17% Similarity=0.129 Sum_probs=83.6
Q ss_pred eEEcccccceecCCCCCcccccccccccccccccccC-CCccccchhhHhHHHHHHHHHhcCCCCcccccccc-cHHHHH
Q 035782 9 AHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEM-SLRDWV 86 (159)
Q Consensus 9 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~-~~~~~~ 86 (159)
-||+|||.|+...++. .....+||..|++||.+. ...|+..+|.||||+++|+.++|..||-......- ....|.
T Consensus 163 yKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~ 239 (732)
T KOG4250|consen 163 YKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWH 239 (732)
T ss_pred EeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhh
Confidence 4999999999886444 455678999999999888 46889999999999999999999999864332211 011111
Q ss_pred Hhh-cCCcccchhhhhcc---ccchhhhhch----HHHHHHHHHHhhhcCCCCCCCC--cHHHHHHHHHHHHH
Q 035782 87 NKS-LSGELTQVIDANLA---RDEQSFFVKM----DCLSSIMHLALDCCMESPDQRI--YMTDAAAKLKKIKE 149 (159)
Q Consensus 87 ~~~-~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~l~~~cl~~~p~~Rp--t~~~ll~~l~~~~~ 149 (159)
... .+........+..+ .....++.+. .....+-+++..++..+|.+|- ...+..+.+..|++
T Consensus 240 ~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 240 IITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred hhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 100 01111111111111 0111112221 2334455677778888888887 55566666665554
No 404
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.31 E-value=4.8e-12 Score=81.13 Aligned_cols=137 Identities=17% Similarity=0.214 Sum_probs=86.6
Q ss_pred ccC-CCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 2 LLD-EDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 2 li~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
+|| ..-.++|+|+|+|.++-.+.+.+. .+.+..|--||.+... .|..+.|+|||||++..|+..+.||-.-..+-
T Consensus 164 mIdh~~rkLrlIDWGLAEFYHp~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~ 240 (338)
T KOG0668|consen 164 MIDHELRKLRLIDWGLAEFYHPGKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 240 (338)
T ss_pred eechhhceeeeeecchHhhcCCCceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH
Confidence 455 335789999999998865555443 4577888999987766 57889999999999999999999975322211
Q ss_pred c------------cHHHHHHhh---cCCcccchhhhhccccchhhhh---chHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 80 M------------SLRDWVNKS---LSGELTQVIDANLARDEQSFFV---KMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 80 ~------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
. .+..+..++ ..+....++.....+.-..+.. ..-..++..+++.+.+..|..+|+|+.|+.
T Consensus 241 DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam 320 (338)
T KOG0668|consen 241 DQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM 320 (338)
T ss_pred HHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh
Confidence 1 111222222 2222222222111111111100 111236788999999999999999999987
No 405
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.31 E-value=2.5e-12 Score=85.99 Aligned_cols=132 Identities=14% Similarity=0.187 Sum_probs=81.1
Q ss_pred ceEEcccccceecCCCCCccc-----ccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 8 VAHVSDFGISKLLGDGDDSVT-----QTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 8 ~~kl~Dfg~~~~~~~~~~~~~-----~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
-+|||||.+..-+.-+..... ..+.+|+-.|||||++. ...|..+.|.||+|+++|-|++|.+||.+.-.
T Consensus 217 PvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg 296 (463)
T KOG0607|consen 217 PVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG 296 (463)
T ss_pred ceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccC
Confidence 469999988754322222111 23467888899999642 23588999999999999999999999987655
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhh--hchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFF--VKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.+..+.+ ...=..+++.+=..++...+.++ ....+.....+++...+..|+.+|.++.++++
T Consensus 297 ~dCGWdr---Ge~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 297 ADCGWDR---GEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CcCCccC---CCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 4432110 00000011111011111111111 12345667778888889999999999998875
No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.16 E-value=6.9e-12 Score=89.57 Aligned_cols=69 Identities=22% Similarity=0.396 Sum_probs=58.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCcc-ccchhhHhHHHHHHHHHhcCCCCc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTRKKPTD 73 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~~~~p~~ 73 (159)
++++.+|.+||+|||.+....++. ...++||..|.|||++.+.+| ....|+|++|+++|.++....||.
T Consensus 701 vivd~~g~~klidfgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 701 VIVDSNGFVKLIDFGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEEecCCeEEEeeccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 467899999999999997764333 344789999999999999987 567999999999999988888874
No 407
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.15 E-value=1.2e-11 Score=93.51 Aligned_cols=117 Identities=18% Similarity=0.131 Sum_probs=77.5
Q ss_pred ccCCCCceEEcccccceecCCCCCcc-------------cccccccccccccccccCCCccccchhhHhHHHHHHHHHhc
Q 035782 2 LLDEDMVAHVSDFGISKLLGDGDDSV-------------TQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTR 68 (159)
Q Consensus 2 li~~~~~~kl~Dfg~~~~~~~~~~~~-------------~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~ 68 (159)
+|..-|+.|++|||+++........+ .-..++||+.|+|||+..-.+|...+|.|++|+++|+.+-|
T Consensus 175 lIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVg 254 (1205)
T KOG0606|consen 175 LITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVG 254 (1205)
T ss_pred eeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHhee
Confidence 56677899999999987643211111 11236899999999999999999999999999999999999
Q ss_pred CCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCC
Q 035782 69 KKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRI 135 (159)
Q Consensus 69 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp 135 (159)
..||.+..+++. +...+...+ .... .....+.+...++...|+.+|..|.
T Consensus 255 cvpffGdtpeel-fg~visd~i------------~wpE----~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 255 CVPFFGDTPEEL-FGQVISDDI------------EWPE----EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred eeeccCCCHHHH-Hhhhhhhhc------------cccc----cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 999865422211 111111111 0000 0112344667778888888888884
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.10 E-value=2.2e-10 Score=74.59 Aligned_cols=73 Identities=26% Similarity=0.365 Sum_probs=56.5
Q ss_pred CccCCCCceEEcccccceecCCCCCccccccccccccccccccc-CCCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG-SEGIVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~-~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
|+++.++.++|+|||.+......... ......++..|++||.. ....++.++|+|++|++++++++|+.||..
T Consensus 129 i~v~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 129 ILLGMDGLVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred EEEcCCCCEEEeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 46777899999999999876433200 12224567789999987 555677799999999999999999999854
No 409
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.06 E-value=2.2e-10 Score=76.87 Aligned_cols=105 Identities=18% Similarity=0.211 Sum_probs=62.8
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCC--------CccccchhhHhHHHHHHHHHhcCCCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSE--------GIVSTKCDVYSYGVLLMETFTRKKPT 72 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~--------~~~~~~~dv~s~g~~~~~~~~~~~p~ 72 (159)
++++.+|.+.|+||+.....+ ... .. ...+..|.+||.... ..++.+.|.|++|+++|.++++..||
T Consensus 176 fll~~~G~v~Lg~F~~~~r~g--~~~-~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf 250 (288)
T PF14531_consen 176 FLLDQDGGVFLGDFSSLVRAG--TRY-RC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPF 250 (288)
T ss_dssp EEE-TTS-EEE--GGGEEETT--EEE-EG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-ST
T ss_pred EEEcCCCCEEEcChHHHeecC--cee-ec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCC
Confidence 468899999999998876642 111 11 223467889985422 25778899999999999999999998
Q ss_pred cccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCC
Q 035782 73 DEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQR 134 (159)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R 134 (159)
........... .... ..+.++.+..|+..+|+.||.+|
T Consensus 251 ~~~~~~~~~~~-----------------~f~~-------C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 251 GLSSPEADPEW-----------------DFSR-------CRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCCGGGSTSGG-----------------GGTT-------SS---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCccccccc-----------------cchh-------cCCcCHHHHHHHHHHccCCcccC
Confidence 75432111000 0111 11567789999999999999988
No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.04 E-value=2e-10 Score=75.52 Aligned_cols=118 Identities=17% Similarity=0.244 Sum_probs=74.0
Q ss_pred CceEEcccccceecCCCCCccccccccccccccccccc---CCC--ccccchhhHhHHHHHHHHHhcCCCCccccccccc
Q 035782 7 MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYG---SEG--IVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMS 81 (159)
Q Consensus 7 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~---~~~--~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~ 81 (159)
..+||||||+.+..+..... .--+..|.+||.+ ..+ ..++..|+|.||++++..++|..||+.....+..
T Consensus 160 ~rvKlcDFG~t~k~g~tV~~-----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~ 234 (378)
T KOG1345|consen 160 YRVKLCDFGLTRKVGTTVKY-----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP 234 (378)
T ss_pred cEEEeeecccccccCceehh-----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCch
Confidence 47999999998876422111 1123357888853 233 3567899999999999999999999977667766
Q ss_pred HHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 82 LRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
+-+|..=...... .+....+ --.+.++.+.++-+..++.+|-.+.++.
T Consensus 235 Y~~~~~w~~rk~~------~~P~~F~------~fs~~a~r~Fkk~lt~~~~drcki~~~k 282 (378)
T KOG1345|consen 235 YWEWEQWLKRKNP------ALPKKFN------PFSEKALRLFKKSLTPRFKDRCKIWTAK 282 (378)
T ss_pred HHHHHHHhcccCc------cCchhhc------ccCHHHHHHHHHhcCCcccccchhHHHH
Confidence 6655432111000 0111111 1134567778888888998885444443
No 411
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=98.97 E-value=2e-10 Score=79.00 Aligned_cols=110 Identities=22% Similarity=0.272 Sum_probs=68.0
Q ss_pred ccccccccccccCCCc-cccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHH--------Hhh--cCCc---cc---
Q 035782 33 MATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWV--------NKS--LSGE---LT--- 95 (159)
Q Consensus 33 ~gt~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~--------~~~--~~~~---~~--- 95 (159)
.||++|.|||++...+ -+++.|+||.|+++..++++..||-....+-..+.+.. ++. ..+. ++
T Consensus 238 AGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn 317 (418)
T KOG1167|consen 238 AGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSN 317 (418)
T ss_pred CCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecccc
Confidence 4999999999987664 57889999999999999999999865444332222110 000 0000 00
Q ss_pred --chhh----------hhccc-cc---hhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 96 --QVID----------ANLAR-DE---QSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 96 --~~~~----------~~~~~-~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
.+.+ ..+.+ +. .........+..+++++.+|+..||.+|.|++++|+
T Consensus 318 ~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 318 IPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 0000 00001 00 011111122347899999999999999999999984
No 412
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.95 E-value=5e-10 Score=80.67 Aligned_cols=66 Identities=30% Similarity=0.336 Sum_probs=56.0
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~ 74 (159)
|+++.+|++|+.|||+++.....+. .+||.-|+|||+.. .+..+.|.||||++.+++++|..||..
T Consensus 128 illd~~Ghi~~tdfglske~v~~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 128 VLLLLEGHIKLTDFGLSKEAVKEKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred eeecccCccccCCchhhhHhHhhhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 6788999999999999987542221 27899999999988 457889999999999999999999875
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.84 E-value=3.6e-08 Score=67.28 Aligned_cols=134 Identities=25% Similarity=0.307 Sum_probs=85.3
Q ss_pred CccCCCC-ceEEcccccceecCCCCCcc----cccccccccccccccccCC---CccccchhhHhHHHHHHHHHhcCCCC
Q 035782 1 ILLDEDM-VAHVSDFGISKLLGDGDDSV----TQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTRKKPT 72 (159)
Q Consensus 1 ili~~~~-~~kl~Dfg~~~~~~~~~~~~----~~~~~~gt~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~~~~p~ 72 (159)
|+++..+ .++++|||.++.+....... ......|+..|++||...+ .......|+|++|+++++++.+..||
T Consensus 132 il~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~ 211 (384)
T COG0515 132 ILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPF 211 (384)
T ss_pred eeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 4667667 69999999998654332221 2345679999999998877 46788899999999999999999986
Q ss_pred cccccc--cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 73 DEMFIG--EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 73 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
...... .......+.......... ....... ......+.+++..|+..+|..|.+..+....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 212 EGEKNSSATSQTLKIILELPTPSLAS----PLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred CCCCccccHHHHHHHHHhcCCccccc----ccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 543321 111111111111110000 0000000 1233567889999999999999998876654
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=98.72 E-value=2.4e-08 Score=76.78 Aligned_cols=126 Identities=19% Similarity=0.201 Sum_probs=72.6
Q ss_pred CccCCCCceEEcccccceec-CCCCC----cccccccccccccccccccCC----------Cc-cccchhhHhHHHHHHH
Q 035782 1 ILLDEDMVAHVSDFGISKLL-GDGDD----SVTQTMTMATIGYMAPEYGSE----------GI-VSTKCDVYSYGVLLME 64 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~-~~~~~----~~~~~~~~gt~~~~~pe~~~~----------~~-~~~~~dv~s~g~~~~~ 64 (159)
|||..=+.+-|+||..-+.. ...+. ..-..+...-..|+|||.+.. .+ .+++.|+||.||++.|
T Consensus 151 ILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaE 230 (1431)
T KOG1240|consen 151 ILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAE 230 (1431)
T ss_pred EEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHH
Confidence 45555566778888765432 11111 111111111235999996433 12 5678999999999999
Q ss_pred HHh-cCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 65 TFT-RKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 65 ~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
++. |+++|.-.. +..+.... ....+.++.+. +...+++++..|++.||++|.++++.|+.
T Consensus 231 Lf~Eg~PlF~LSQ-----L~aYr~~~-~~~~e~~Le~I-------------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 231 LFLEGRPLFTLSQ-----LLAYRSGN-ADDPEQLLEKI-------------EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHhcCCCcccHHH-----HHhHhccC-ccCHHHHHHhC-------------cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 987 567764311 11111110 11111111111 11257889999999999999999999987
Q ss_pred HH
Q 035782 144 LK 145 (159)
Q Consensus 144 l~ 145 (159)
-+
T Consensus 292 yr 293 (1431)
T KOG1240|consen 292 YR 293 (1431)
T ss_pred hh
Confidence 43
No 415
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.71 E-value=2.6e-09 Score=78.97 Aligned_cols=125 Identities=21% Similarity=0.227 Sum_probs=87.1
Q ss_pred ccCCCC-ceEEcccccceecCC-CCCccccccccc-ccccccccccCCC-ccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 2 LLDEDM-VAHVSDFGISKLLGD-GDDSVTQTMTMA-TIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 2 li~~~~-~~kl~Dfg~~~~~~~-~~~~~~~~~~~g-t~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
+++.++ ..|++|||+|..+.. .+........+| ++.|.|||...+. ......|+||+|+++..++.|..|+.....
T Consensus 156 ~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~ 235 (601)
T KOG0590|consen 156 LLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSR 235 (601)
T ss_pred hhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccc
Confidence 567778 899999999998876 555545555678 9999999988774 456789999999999999999999876544
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
.+..+..|........ . ...........++..+++..+|+.|.+.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 236 KDGRYSSWKSNKGRFT--Q-------------LPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccceeecccccccc--c-------------CccccCChhhhhcccccccCCchhcccccccc
Confidence 3332222222110000 0 00112334567778888889999999988765
No 416
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=98.49 E-value=4.5e-07 Score=63.23 Aligned_cols=113 Identities=19% Similarity=0.167 Sum_probs=68.8
Q ss_pred ceEEcccccceecCCCCC----cccccccccccccccccccCCC--c----cccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 8 VAHVSDFGISKLLGDGDD----SVTQTMTMATIGYMAPEYGSEG--I----VSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 8 ~~kl~Dfg~~~~~~~~~~----~~~~~~~~gt~~~~~pe~~~~~--~----~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
.+.++|||.|-.-.+.+- ....-...|.-..+|||+...- + .-.++|.|+.|.+-||++....||..-..
T Consensus 383 ~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe 462 (598)
T KOG4158|consen 383 QLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE 462 (598)
T ss_pred EEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch
Confidence 457999998865322111 1111112355668999975432 2 12579999999999999999999875211
Q ss_pred ccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 78 GEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
.-.+...+-... + ...+..+++.+.+++...++.||++|++..
T Consensus 463 m~L~~r~Yqe~q------------L------Palp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 463 MLLDTRTYQESQ------------L------PALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred heechhhhhhhh------------C------CCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 111111111100 1 112335677889999999999999999854
No 417
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.39 E-value=2.8e-06 Score=59.98 Aligned_cols=148 Identities=12% Similarity=0.106 Sum_probs=86.1
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccC-----CCccccchhhHhHHHHHHHHHhc-CCCCcc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTR-KKPTDE 74 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~~-~~p~~~ 74 (159)
+|+.+++.|.|.|-..-....+ + ...-..+|...|.+||.-. +...+...|.|.+|+++++++.| ++||.+
T Consensus 148 ~lVsd~~~V~LVdsDsfqi~~n-g--~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG 224 (637)
T COG4248 148 FLVSDDSKVVLVDSDSFQINAN-G--TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG 224 (637)
T ss_pred eeeecCceEEEEcccceeeccC-C--ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence 3556666666666544333211 1 1223356888999999532 33455678999999999999886 899987
Q ss_pred cccccc---cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCC--CCCCCcHHHHHHHHHHHHH
Q 035782 75 MFIGEM---SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMES--PDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 75 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~--p~~Rpt~~~ll~~l~~~~~ 149 (159)
+..... .+...+.......-.+ ......+.+.. .-....++.+..+...|+... +.-|||++-.+..|.++..
T Consensus 225 I~~~~~ap~p~E~~Ia~g~f~ya~~-~~~g~~p~P~~-~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 225 IPLISDAPNPLETDIAHGRFAYASD-QRRGLKPPPRS-IPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred ccccCCCCCcchhhhhcceeeechh-ccCCCCCCCCC-CChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 654321 1111111111000000 01111111111 111234567888899998654 5789999999999999988
Q ss_pred Hhhh
Q 035782 150 KFLD 153 (159)
Q Consensus 150 ~~~~ 153 (159)
++..
T Consensus 303 ~L~~ 306 (637)
T COG4248 303 QLKK 306 (637)
T ss_pred hhhh
Confidence 7654
No 418
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.99 E-value=0.00011 Score=51.04 Aligned_cols=127 Identities=12% Similarity=0.055 Sum_probs=80.8
Q ss_pred CceEEcccccce--ecCCCCCc---cc---ccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 7 MVAHVSDFGISK--LLGDGDDS---VT---QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 7 ~~~kl~Dfg~~~--~~~~~~~~---~~---~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
..+.|.|||+++ .+...... .. .....||..|.++..-.+...+.+-|+||++.++.++..|..||......
T Consensus 164 ~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~ 243 (322)
T KOG1164|consen 164 RTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMT 243 (322)
T ss_pred ceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccccc
Confidence 468999999998 43222211 11 12345999999999888888889999999999999999999998654432
Q ss_pred cc--cHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 79 EM--SLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 79 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
.. ............. .....+..+.+++..+-..+...+|....+...|+.+...
T Consensus 244 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 244 DLKSKFEKDPRKLLTDR-----------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred chHHHHHHHhhhhcccc-----------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 11 1111000000000 0012234455555555568999999999888887776654
No 419
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=97.96 E-value=7.5e-06 Score=63.31 Aligned_cols=90 Identities=24% Similarity=0.180 Sum_probs=62.0
Q ss_pred cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhh
Q 035782 32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFV 111 (159)
Q Consensus 32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (159)
..||+.|.+||...+......+|.|+.|+++++.++|..||...... ++++..+.....-...
T Consensus 995 ~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq-----------------~~f~ni~~~~~~~p~g 1057 (1205)
T KOG0606|consen 995 VVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ-----------------QIFENILNRDIPWPEG 1057 (1205)
T ss_pred ccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh-----------------hhhhccccCCCCCCCC
Confidence 56899999999999988889999999999999999999998764321 1122222222222222
Q ss_pred chHHHHHHHHHHhhhcCCCCCCCCcHH
Q 035782 112 KMDCLSSIMHLALDCCMESPDQRIYMT 138 (159)
Q Consensus 112 ~~~~~~~~~~l~~~cl~~~p~~Rpt~~ 138 (159)
+.........+...-+..+|.+|..+.
T Consensus 1058 ~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1058 PEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred ccccChhhhhhhhhhhccCchhccCcc
Confidence 334445566677777778888886654
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.80 E-value=0.00018 Score=49.49 Aligned_cols=71 Identities=21% Similarity=0.215 Sum_probs=56.5
Q ss_pred CceEEcccccceecCCCCCccc-----ccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCccccc
Q 035782 7 MVAHVSDFGISKLLGDGDDSVT-----QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFI 77 (159)
Q Consensus 7 ~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~ 77 (159)
..+.+.|||+|+.+.+.....+ .....||-+||+...-.+..-+.+-|.=++|-+++..+.|..||++.+.
T Consensus 166 n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 166 NVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred ceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 4578999999999876544322 2234589999999887777777888999999999999999999998653
No 421
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.71 E-value=1.2e-05 Score=59.58 Aligned_cols=126 Identities=15% Similarity=0.078 Sum_probs=76.4
Q ss_pred CccCCCCceEEcccccceecCCCCCccc--ccc-----cccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCc
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVT--QTM-----TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTD 73 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~-----~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~ 73 (159)
|.++.++..||+.|+++.....+.++.. ++. .....-|.+||++.....+.++|++|+|+.++.+..+..+.-
T Consensus 131 i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~ 210 (700)
T KOG2137|consen 131 IVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSII 210 (700)
T ss_pred eeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchh
Confidence 4678889999999999876543222111 110 112335999999988888899999999999998885444322
Q ss_pred ccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 74 EMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
........+..... ..+ ...+......+.++.+-+.+.+..++.-||++..++
T Consensus 211 ~a~~~~~~~~~~~~---~~~------------~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 211 AANGGLLSYSFSRN---LLN------------AGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred hccCCcchhhhhhc---ccc------------cccccccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence 11111111100000 000 001111135677888899999999999999766554
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.36 E-value=0.00084 Score=52.56 Aligned_cols=66 Identities=14% Similarity=-0.047 Sum_probs=51.9
Q ss_pred CCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCC
Q 035782 6 DMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKP 71 (159)
Q Consensus 6 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p 71 (159)
+..++|+|||.+.-+.--.........++|-.+-.+|..-+.+++..+|.|+++.+++.|+.|+..
T Consensus 837 ~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 837 SKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 346899999999765322222334446677789999999999999999999999999999998654
No 423
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.16 E-value=0.0009 Score=48.94 Aligned_cols=125 Identities=18% Similarity=0.182 Sum_probs=74.2
Q ss_pred cCCC-CceEEcccccceecCCCCCccccc---ccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 3 LDED-MVAHVSDFGISKLLGDGDDSVTQT---MTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 3 i~~~-~~~kl~Dfg~~~~~~~~~~~~~~~---~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
+..+ ...+++|||+...+.......... ..-|...|++||...+ -++...|++++|.++.+...+..++..-+.
T Consensus 255 ~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~- 332 (524)
T KOG0601|consen 255 TTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN- 332 (524)
T ss_pred cccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC-
Confidence 3445 678999999998886554332221 1135667999998877 457788999999999999887765432111
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
..|.++-...+.... .......+...+..+++.++-.|+++.. +..+.-|.
T Consensus 333 -------------~~W~~~r~~~ip~e~-----~~~~s~~l~~~~~~~~d~~~~~~~~~q~-~~~l~~i~ 383 (524)
T KOG0601|consen 333 -------------SSWSQLRQGYIPLEF-----CEGGSSSLRSVTSQMLDEDPRLRLTAQI-LTALNVIH 383 (524)
T ss_pred -------------CCccccccccCchhh-----hcCcchhhhhHHHHhcCcchhhhhHHHH-Hhcccccc
Confidence 111111000000000 0011233444788899999999998764 44444443
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=97.10 E-value=0.00027 Score=49.78 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=32.2
Q ss_pred CccCCCCceEEcccccceecCCCCCccc------ccccccccccccccccCC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVT------QTMTMATIGYMAPEYGSE 46 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~------~~~~~gt~~~~~pe~~~~ 46 (159)
||++.++.+||+|||+++.+........ .+...+++.|.+||.+..
T Consensus 143 ILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 143 WLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 5778889999999999997654332111 134567788999997654
No 425
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.01 E-value=0.0015 Score=45.16 Aligned_cols=38 Identities=24% Similarity=0.453 Sum_probs=31.4
Q ss_pred cccccccccccccCCCccccchhhHhHHHHHHHHHhcC
Q 035782 32 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK 69 (159)
Q Consensus 32 ~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~ 69 (159)
..+.++|.+|++-.....+.++|||+||.+-.+|..+.
T Consensus 242 ~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 242 NTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred cccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 34677899999877777788999999999988887654
No 426
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.87 E-value=0.00048 Score=52.51 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=39.5
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCC-ccccchhhHhHHH
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGV 60 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~-~~~~~~dv~s~g~ 60 (159)
||++.++.+||+|||+++....... ......+++.|.+||..... +-....++|++|.
T Consensus 135 ILl~~~g~vkL~DFGls~~~~~~~~--~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~ 193 (669)
T cd05610 135 MLISNEGHIKLTDFGLSKVTLNREL--NMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGF 193 (669)
T ss_pred EEEcCCCCEEEEeCCCCccccCCcc--cccccccCccccCccccccCCCCceeeeeeecCc
Confidence 6888999999999999987643221 22235688899999854332 2234466777774
No 427
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.84 E-value=0.0031 Score=41.85 Aligned_cols=72 Identities=19% Similarity=0.063 Sum_probs=51.8
Q ss_pred CceEEcccccceecCCCCCcccc-----cccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 7 MVAHVSDFGISKLLGDGDDSVTQ-----TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 7 ~~~kl~Dfg~~~~~~~~~~~~~~-----~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
..+-++|||+++.+.+.....+. ..-.||..|.+-....+-.-+.+-|+=|+|.++...-.|..||++....
T Consensus 151 ~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 151 NKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 56789999999988654332221 2234788887776555444466789999999998888999999987643
No 428
>PRK12274 serine/threonine protein kinase; Provisional
Probab=96.21 E-value=0.0031 Score=41.10 Aligned_cols=72 Identities=17% Similarity=0.055 Sum_probs=43.5
Q ss_pred CccCCCCceEEcccccceecCCCCCc----cc-------ccccccccccccccccCCC-ccc-cchhhHhHHHHHHHHHh
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDS----VT-------QTMTMATIGYMAPEYGSEG-IVS-TKCDVYSYGVLLMETFT 67 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~----~~-------~~~~~gt~~~~~pe~~~~~-~~~-~~~dv~s~g~~~~~~~~ 67 (159)
||++.++.++|+|||++......... .. ......++.++.|+...-. ..+ .+.+.++-|.-+|.+++
T Consensus 123 ILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~ 202 (218)
T PRK12274 123 WLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVT 202 (218)
T ss_pred EEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHh
Confidence 57888899999999999865433211 00 0011134556666532211 122 34456678999999999
Q ss_pred cCCCC
Q 035782 68 RKKPT 72 (159)
Q Consensus 68 ~~~p~ 72 (159)
+..++
T Consensus 203 ~~~~~ 207 (218)
T PRK12274 203 RRVLH 207 (218)
T ss_pred ccCCc
Confidence 88764
No 429
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=95.79 E-value=0.001 Score=43.88 Aligned_cols=49 Identities=10% Similarity=0.152 Sum_probs=30.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHH
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLME 64 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~ 64 (159)
|+++.+| ++|+|||........... . .+.....++.++|+|++|+++.-
T Consensus 166 ili~~~g-i~liDfg~~~~~~e~~a~---d-----------~~vler~y~~~~di~~lg~~~~~ 214 (232)
T PRK10359 166 FIVSKNG-LRIIDLSGKRCTAQRKAK---D-----------RIDLERHYGIKNEIKDLGYYLLI 214 (232)
T ss_pred EEEeCCC-EEEEECCCcccccchhhH---H-----------HHHHHhHhcccccccceeEeehH
Confidence 4677778 999999987654211110 0 02222245567999999987653
No 430
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=93.37 E-value=0.088 Score=39.23 Aligned_cols=83 Identities=17% Similarity=0.198 Sum_probs=48.3
Q ss_pred cchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCC
Q 035782 51 TKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMES 130 (159)
Q Consensus 51 ~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~ 130 (159)
+++|||++|.++.++..|..-++... .......+.+....+.....-.+-. ....++...+.++...|+-..
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~--~s~~l~~i~k~~~~d~~~~~~a~e~------~~~~~~d~~~~~~~~~c~~~~ 181 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELT--ESEYLEILLKYYTDDQELLSTAMEH------LIQLLADKKRLPLLKKCLWLE 181 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHH--HHHHHHHHHHhccCchhHHHHHHHH------HHHHhhhHhHHHHhccCCccc
Confidence 68999999999999988765543321 1222223333322222111111110 112256677888999999999
Q ss_pred CCCCCcHHHHH
Q 035782 131 PDQRIYMTDAA 141 (159)
Q Consensus 131 p~~Rpt~~~ll 141 (159)
|+.||...++.
T Consensus 182 ~~ir~l~~~~~ 192 (725)
T KOG1093|consen 182 PIIRPLPMELS 192 (725)
T ss_pred cccccchhHHh
Confidence 99988655443
No 431
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=88.53 E-value=0.8 Score=35.12 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=38.4
Q ss_pred CccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcC
Q 035782 1 ILLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRK 69 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~ 69 (159)
|.++..|.-||++|-++........ ......--..|..|+...... -..|.|.||+++++++.|.
T Consensus 136 VfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 136 VFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred EEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 4577888889998888755421110 000011112345555433322 3469999999999999983
No 432
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=84.85 E-value=0.52 Score=36.20 Aligned_cols=65 Identities=18% Similarity=0.151 Sum_probs=47.1
Q ss_pred CCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCC
Q 035782 4 DEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKP 71 (159)
Q Consensus 4 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p 71 (159)
..++..|.+||+....+.... ......+++.|++||+.....+..+.|+|+.+.---++..|.+|
T Consensus 365 ~s~~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pP 429 (829)
T KOG0576|consen 365 GSEEEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPP 429 (829)
T ss_pred ccccccccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCC
Confidence 345678889999877653221 34446789999999998888888889999998654455555544
No 433
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=83.82 E-value=2.3 Score=27.99 Aligned_cols=22 Identities=14% Similarity=0.107 Sum_probs=17.7
Q ss_pred CCCCcHHHHHHHHHHHHHHhhh
Q 035782 132 DQRIYMTDAAAKLKKIKEKFLD 153 (159)
Q Consensus 132 ~~Rpt~~~ll~~l~~~~~~~~~ 153 (159)
..|++.+++...|..+.+....
T Consensus 137 ~~r~~~~elk~EL~~l~~~~~~ 158 (213)
T PF04301_consen 137 PPRRSFEELKEELAALYEFIKK 158 (213)
T ss_pred CcCCCHHHHHHHHHHHHHHHhc
Confidence 4688999999999999776543
No 434
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=83.16 E-value=3.3 Score=34.37 Aligned_cols=108 Identities=21% Similarity=0.264 Sum_probs=61.4
Q ss_pred CCCCceEEc--ccccceecCCCCCcccccccccccccccccccCCCcc--ccchhhHhHHHHHHHHHhcCCCCccccccc
Q 035782 4 DEDMVAHVS--DFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIV--STKCDVYSYGVLLMETFTRKKPTDEMFIGE 79 (159)
Q Consensus 4 ~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~--~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~ 79 (159)
+..+.+.++ ||+..+...+..... ....+..+-++|......+ ....|+|.+|.....+..+..+-...
T Consensus 323 ~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~---- 395 (1351)
T KOG1035|consen 323 DGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKS---- 395 (1351)
T ss_pred CccceeecchhhhcccccCCCcccch---hhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccc----
Confidence 344556666 777776654332211 1223344666766554433 34479999999988887765441110
Q ss_pred ccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 80 MSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
.....+++ ............+|...++++|+.+.+++..
T Consensus 396 ------------~~~~~~l~-------------~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~ 434 (1351)
T KOG1035|consen 396 ------------AVPVSLLD-------------VLSTSELLDALPKCLDEDSEERLSALELLTH 434 (1351)
T ss_pred ------------cchhhhhc-------------cccchhhhhhhhhhcchhhhhccchhhhhhc
Confidence 00000110 0111145667889999999999999888753
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=79.80 E-value=1.4 Score=32.96 Aligned_cols=114 Identities=14% Similarity=0.062 Sum_probs=61.0
Q ss_pred ccCCC-CceEEcccccceecCCCCCcccccccccccccc--cccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccc
Q 035782 2 LLDED-MVAHVSDFGISKLLGDGDDSVTQTMTMATIGYM--APEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIG 78 (159)
Q Consensus 2 li~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~--~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~ 78 (159)
++..+ +..+++|||....+. .. .......-++. ++.......+..++|+++||..+.+..++...-...
T Consensus 398 ~i~~~~~~~~~~~~~~~t~~~---~~--~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~--- 469 (524)
T KOG0601|consen 398 LISNDGFFSKLGDFGCWTRLA---FS--SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG--- 469 (524)
T ss_pred eeccchhhhhccccccccccc---ee--cccccccccccccchhhccccccccccccccccccccccccCcccCccc---
Confidence 34443 677888888775321 00 00011222333 444445556778899999999888887765431110
Q ss_pred cccHHHHHHhhcCCcccchhhhhccccchhhhhchHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 035782 79 EMSLRDWVNKSLSGELTQVIDANLARDEQSFFVKMDCLSSIMHLALDCCMESPDQRIYMTDAAAK 143 (159)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~ 143 (159)
..+..+.. ...... ......+..+...+...++..||.+.++...
T Consensus 470 -------------~~~~~i~~-~~~p~~------~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 470 -------------VQSLTIRS-GDTPNL------PGLKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred -------------ccceeeec-ccccCC------CchHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 00011110 000000 1122566777888888999999988766543
No 436
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=78.21 E-value=1.2 Score=29.79 Aligned_cols=20 Identities=40% Similarity=0.424 Sum_probs=16.7
Q ss_pred CccCCCCceEEcccccceec
Q 035782 1 ILLDEDMVAHVSDFGISKLL 20 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~ 20 (159)
||++.++.++|+|||.+...
T Consensus 173 ILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 173 ILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred EEEcCCCCEEEEECCCcccC
Confidence 57888889999999988664
No 437
>smart00090 RIO RIO-like kinase.
Probab=70.79 E-value=2 Score=28.68 Aligned_cols=19 Identities=32% Similarity=0.249 Sum_probs=14.9
Q ss_pred CccCCCCceEEcccccceec
Q 035782 1 ILLDEDMVAHVSDFGISKLL 20 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~ 20 (159)
|+++ ++.++|+|||.+...
T Consensus 180 Ili~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEEE-CCCEEEEEChhhhcc
Confidence 4566 678999999998654
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=69.31 E-value=3.2 Score=30.54 Aligned_cols=21 Identities=33% Similarity=0.349 Sum_probs=17.8
Q ss_pred CccCCCCceEEcccccceecC
Q 035782 1 ILLDEDMVAHVSDFGISKLLG 21 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~~ 21 (159)
|+++.++.+++.|||++..+.
T Consensus 288 ilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 288 IFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred EEECCCCcEEEEeCCCeeECC
Confidence 567888999999999997764
No 439
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=69.27 E-value=11 Score=27.00 Aligned_cols=29 Identities=17% Similarity=0.267 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 115 ~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
......+++..|...| |.+|++..|++.+
T Consensus 261 ~~~~~~~~i~~~Fs~~-----tVeeIie~lk~~q 289 (401)
T KOG1684|consen 261 SLSLKLDVINKCFSAN-----TVEEIIEALKNYQ 289 (401)
T ss_pred cchhhHHHHHHhhccc-----cHHHHHHHHHHHh
Confidence 3445788999999655 7889998887766
No 440
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=65.85 E-value=26 Score=25.32 Aligned_cols=90 Identities=12% Similarity=0.006 Sum_probs=47.7
Q ss_pred ccccccccccccCCCccccchhhHhHHHHHHHHHhcCCCCcccccccccHHHHHHhhcCCcccchhhhhccccchhhhhc
Q 035782 33 MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKPTDEMFIGEMSLRDWVNKSLSGELTQVIDANLARDEQSFFVK 112 (159)
Q Consensus 33 ~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (159)
.+...|.+|+.-.....+...|.++++++--+. +|..-..... ..+.-.+........+..
T Consensus 28 ~r~~~~~~pv~~~~ts~s~~~s~~~~eIleesp-~~rw~krreq---------v~qrdvPgid~v~lamd~--------- 88 (458)
T KOG1266|consen 28 MRYMSYIAPVGENATSLSSADSEDESEILEESP-CGRWGKRREQ---------VGQRDVPGIDDVYLAMDT--------- 88 (458)
T ss_pred cccccccCCccccccccCcccccchhhhhccCc-hhhhhhhhhh---------ccCCCCCchHHHHHHhhh---------
Confidence 345568899887776667778889988762211 1110000000 000000111111111111
Q ss_pred hHHHHHHHHHHhhhcCCCCCCCCcHHHHH
Q 035782 113 MDCLSSIMHLALDCCMESPDQRIYMTDAA 141 (159)
Q Consensus 113 ~~~~~~~~~l~~~cl~~~p~~Rpt~~~ll 141 (159)
....+.+|+.+.-|...||..|+...+++
T Consensus 89 e~g~evvwneVq~~~rK~~~~qeek~~~v 117 (458)
T KOG1266|consen 89 EEGVEVVWNEVQFSERKNPKEQEEKRRAV 117 (458)
T ss_pred ccCchhhHHHHHHHHhcChhhCHHHHHHH
Confidence 13456789999999999999999855443
No 441
>PF15027 DUF4525: Domain of unknown function (DUF4525)
Probab=64.86 E-value=20 Score=21.45 Aligned_cols=41 Identities=10% Similarity=0.119 Sum_probs=30.6
Q ss_pred HHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhhccC
Q 035782 118 SIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVAST 158 (159)
Q Consensus 118 ~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~~~~ 158 (159)
-+|-+|..++..+..++.+..++.++.-.+.+.|...++-.
T Consensus 21 fiWGlmLLh~t~qq~~~~ss~~LR~QILdLSkrYVKaLAeE 61 (138)
T PF15027_consen 21 FIWGLMLLHYTFQQPRHQSSAELREQILDLSKRYVKALAEE 61 (138)
T ss_pred HHHHHHHHHheecCCCccChHHHHHHHHHHHHHHHHHHHHH
Confidence 35677888888888766788888888888887777666543
No 442
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=63.33 E-value=1.5 Score=37.84 Aligned_cols=68 Identities=9% Similarity=0.045 Sum_probs=46.4
Q ss_pred ccCCCCceEEcccccceecCCCCCcccccccccccccccccccCCCccccchhhHhHHHHHHHHHhcCCC
Q 035782 2 LLDEDMVAHVSDFGISKLLGDGDDSVTQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTRKKP 71 (159)
Q Consensus 2 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~~~~p 71 (159)
+|..+..+|++++|+.+... ......+...+++.|+.++....-.++.+.|+|..++-++....+..+
T Consensus 1372 mIVtny~v~~gk~gLdKIkn--p~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~ 1439 (2724)
T KOG1826|consen 1372 MIVTNYNVKLGKGGLDKIKN--PVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAY 1439 (2724)
T ss_pred ceecCCcccccccccccccC--chHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHH
Confidence 45566778999999988432 122223345577778888876666777779999988877766555443
No 443
>cd00059 FH Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as monomers, are also found in the Hepatocyte nuclear factor (HNF) proteins, which provide tissue-specific gene regulation. The structure contains 2 flexible loops or "wings" in the C-terminal region, hence the term winged helix.
Probab=61.83 E-value=14 Score=20.05 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=23.1
Q ss_pred HHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 035782 119 IMHLALDCCMESPDQRIYMTDAAAKLKKI 147 (159)
Q Consensus 119 ~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~ 147 (159)
...|+...+...|+++.|..||.+.+++-
T Consensus 6 Y~~LI~~Ai~~sp~~~lTL~eIy~~I~~~ 34 (78)
T cd00059 6 YSALIAMAIQSSPEKRLTLSEIYKWISDN 34 (78)
T ss_pred HHHHHHHHHHhCCCCCeeHHHHHHHHHHh
Confidence 34567777888999999999999887654
No 444
>smart00707 RPEL Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2.
Probab=61.51 E-value=5.7 Score=16.57 Aligned_cols=11 Identities=18% Similarity=0.096 Sum_probs=8.8
Q ss_pred CCCCcHHHHHH
Q 035782 132 DQRIYMTDAAA 142 (159)
Q Consensus 132 ~~Rpt~~~ll~ 142 (159)
+.||+-+|+++
T Consensus 8 ~~RP~~eeLv~ 18 (26)
T smart00707 8 SQRPTREELEE 18 (26)
T ss_pred HcCCCHHHHHH
Confidence 47999988875
No 445
>PF02755 RPEL: RPEL repeat; InterPro: IPR004018 The RPEL repeat is named after four conserved amino acids it contains. The function of the RPEL repeat is unknown however it might be a DNA binding repeat based on the observation that Q9VZY2 from SWISSPROT contains a SAP domain that is also implicated in DNA binding.; PDB: 2YJE_M 2V52_M 2YJF_M 2V51_E.
Probab=60.88 E-value=5.1 Score=16.68 Aligned_cols=11 Identities=18% Similarity=0.099 Sum_probs=5.9
Q ss_pred CCCCcHHHHHH
Q 035782 132 DQRIYMTDAAA 142 (159)
Q Consensus 132 ~~Rpt~~~ll~ 142 (159)
+.||+.+|+++
T Consensus 8 ~~RP~~~eLv~ 18 (26)
T PF02755_consen 8 SQRPTREELVE 18 (26)
T ss_dssp HT---HHHHHH
T ss_pred hcCCCHHHHHH
Confidence 37999988875
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=60.47 E-value=4.3 Score=26.13 Aligned_cols=18 Identities=22% Similarity=0.503 Sum_probs=13.6
Q ss_pred CccCCCCceEEccccccee
Q 035782 1 ILLDEDMVAHVSDFGISKL 19 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~ 19 (159)
||++ ++.++++|||.+..
T Consensus 126 il~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 126 MILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEE-CCCEEEEECCcccC
Confidence 3555 67889999998765
No 447
>PF13220 DUF4028: Protein of unknown function (DUF4028)
Probab=60.14 E-value=14 Score=18.31 Aligned_cols=24 Identities=17% Similarity=0.158 Sum_probs=18.9
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhhh
Q 035782 132 DQRIYMTDAAAKLKKIKEKFLDDV 155 (159)
Q Consensus 132 ~~Rpt~~~ll~~l~~~~~~~~~~~ 155 (159)
-.|||+.++.+.-++-.+.++...
T Consensus 39 lgrptfkevekdwkenresf~ypn 62 (65)
T PF13220_consen 39 LGRPTFKEVEKDWKENRESFMYPN 62 (65)
T ss_pred hCCCcHHHHHHHHHHhhhhhccCC
Confidence 379999999998888777776543
No 448
>PF14707 Sulfatase_C: C-terminal region of aryl-sulfatase; PDB: 1P49_A 1E33_P 1E1Z_P 1N2K_A 1N2L_A 1E2S_P 1E3C_P 1AUK_A.
Probab=57.17 E-value=16 Score=21.96 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=15.8
Q ss_pred CcHHHHHHHHHHHHHHhhhhhc
Q 035782 135 IYMTDAAAKLKKIKEKFLDDVA 156 (159)
Q Consensus 135 pt~~~ll~~l~~~~~~~~~~~~ 156 (159)
|-..+++..|.++.+++...+.
T Consensus 79 p~~~~vl~~l~~~~~~~~~t~~ 100 (131)
T PF14707_consen 79 PEYKEVLAELQKLVDEHRATLT 100 (131)
T ss_dssp CCHHHHHHHHHHHHHHHCCC--
T ss_pred hhHHHHHHHHHHHHHHHHhhCC
Confidence 5667888888888888776653
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=56.94 E-value=5.1 Score=25.54 Aligned_cols=17 Identities=29% Similarity=0.503 Sum_probs=13.4
Q ss_pred ccCCCCceEEccccccee
Q 035782 2 LLDEDMVAHVSDFGISKL 19 (159)
Q Consensus 2 li~~~~~~kl~Dfg~~~~ 19 (159)
+++ ++.+++.|||.+..
T Consensus 122 l~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 122 IVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEE-CCcEEEEECCCCcC
Confidence 455 67899999998765
No 450
>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription]
Probab=56.15 E-value=46 Score=22.68 Aligned_cols=29 Identities=10% Similarity=0.111 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCcHHHHHH
Q 035782 114 DCLSSIMHLALDCCMESPDQRIYMTDAAA 142 (159)
Q Consensus 114 ~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~ 142 (159)
....+.++.+++|-..||.+|..--|||+
T Consensus 131 kKVNEAFE~LKRrT~~NPNQRLPKVEILR 159 (284)
T KOG3960|consen 131 KKVNEAFETLKRRTSSNPNQRLPKVEILR 159 (284)
T ss_pred HHHHHHHHHHHhhcCCCccccccHHHHHH
Confidence 44567888999999999999988777773
No 451
>PRK14064 exodeoxyribonuclease VII small subunit; Provisional
Probab=55.68 E-value=25 Score=18.94 Aligned_cols=23 Identities=22% Similarity=0.304 Sum_probs=18.2
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhh
Q 035782 133 QRIYMTDAAAKLKKIKEKFLDDV 155 (159)
Q Consensus 133 ~Rpt~~~ll~~l~~~~~~~~~~~ 155 (159)
+-.|+++.++.|+.|++++.+..
T Consensus 4 k~~sfEe~l~~LE~IV~~LE~~~ 26 (75)
T PRK14064 4 KKKTFEEAIAELETIVEALENGS 26 (75)
T ss_pred CcCCHHHHHHHHHHHHHHHHCCC
Confidence 44689999999999998886543
No 452
>PRK00977 exodeoxyribonuclease VII small subunit; Provisional
Probab=52.95 E-value=27 Score=19.08 Aligned_cols=25 Identities=16% Similarity=0.250 Sum_probs=19.8
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhhh
Q 035782 131 PDQRIYMTDAAAKLKKIKEKFLDDV 155 (159)
Q Consensus 131 p~~Rpt~~~ll~~l~~~~~~~~~~~ 155 (159)
..+.+|+++.+..|+.|++++.+..
T Consensus 6 ~~~~~sfEea~~~LEeIv~~LE~~~ 30 (80)
T PRK00977 6 KSKPLSFEEALAELEEIVTRLESGD 30 (80)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHCCC
Confidence 3456889999999999999887543
No 453
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=50.25 E-value=7.3 Score=29.50 Aligned_cols=19 Identities=26% Similarity=0.438 Sum_probs=14.7
Q ss_pred CccCCCCceEEcccccceec
Q 035782 1 ILLDEDMVAHVSDFGISKLL 20 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~ 20 (159)
||+ .++.++|+|||+++..
T Consensus 459 ILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 459 FIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEE-ECCcEEEEeCcccccC
Confidence 355 5678999999998764
No 454
>PF02671 PAH: Paired amphipathic helix repeat; InterPro: IPR003822 This family contains the paired amphipathic helix (PAH) repeat. The family contains the eukaryotic Sin3 proteins, which have at least three PAH domains (PAH1, PAH2, and PAH3). Sin3 proteins are components of a co-repressor complex that silences transcription, playing important roles in the transition between proliferation and differentiation. Sin3 proteins are recruited to the DNA by various DNA-binding transcription factors such as the Mad family of repressors, Mnt/Rox, PLZF, MeCP2, p53, REST/NRSF, MNFbeta, Sp1, TGIF and Ume6 []. Sin3 acts as a scaffold protein that in turn recruits histone-binding proteins RbAp46/RbAp48 and histone deacetylases HDAC1/HDAC2, which deacetylate the core histones resulting in a repressed state of the chromatin []. The PAH domains are protein-protein interaction domains through which Sin3 fulfils its role as a scaffold. The PAH2 domain of Sin3 can interact with a wide range of unrelated and structurally diverse transcription factors that bind using different interaction motifs. For example, the Sin3 PAH2 domain can interact with the unrelated Mad and HBP1 factors using alternative interaction motifs that involve binding in opposite helical orientations [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1S5Q_B 2L9S_B 1G1E_B 1S5R_B 2CR7_A 2CZY_A 2LD7_B 2RMR_A 2RMS_A 1PD7_A ....
Probab=49.24 E-value=30 Score=16.37 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=23.3
Q ss_pred HHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782 116 LSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLD 153 (159)
Q Consensus 116 ~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~ 153 (159)
..++++++..+-+ ++.+..++.+.+..+...+.+
T Consensus 4 Y~~FL~il~~y~~----~~~~~~~v~~~v~~Ll~~hpd 37 (47)
T PF02671_consen 4 YNEFLKILNDYKK----GRISRSEVIEEVSELLRGHPD 37 (47)
T ss_dssp HHHHHHHHHHHHC----TCSCHHHHHHHHHHHTTT-HH
T ss_pred HHHHHHHHHHHHh----cCCCHHHHHHHHHHHHccCHH
Confidence 4456666665554 688888899888888776544
No 455
>smart00339 FH FORKHEAD. FORKHEAD, also known as a "winged helix"
Probab=48.51 E-value=30 Score=19.31 Aligned_cols=29 Identities=17% Similarity=0.268 Sum_probs=22.4
Q ss_pred HHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 035782 120 MHLALDCCMESPDQRIYMTDAAAKLKKIK 148 (159)
Q Consensus 120 ~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~ 148 (159)
..|+...+...|.++.|..+|.+.+++--
T Consensus 7 ~~lI~~ai~~sp~~~ltl~~Iy~~I~~~~ 35 (89)
T smart00339 7 IALIAMAILSSPDKRLTLSEIYKWIEDNF 35 (89)
T ss_pred HHHHHHHHHhCCCCCeeHHHHHHHHHHhC
Confidence 44666667778999999999998876543
No 456
>TIGR01280 xseB exodeoxyribonuclease VII, small subunit. This protein is the small subunit for exodeoxyribonuclease VII. Exodeoxyribonuclease VII is made of a complex of four small subunits to one large subunit. The complex degrades single-stranded DNA into large acid-insoluble oligonucleotides. These nucleotides are then degraded further into acid-soluble oligonucleotides.
Probab=48.40 E-value=30 Score=18.18 Aligned_cols=19 Identities=21% Similarity=0.344 Sum_probs=13.7
Q ss_pred cHHHHHHHHHHHHHHhhhh
Q 035782 136 YMTDAAAKLKKIKEKFLDD 154 (159)
Q Consensus 136 t~~~ll~~l~~~~~~~~~~ 154 (159)
|+++.+..|+.|++++.+.
T Consensus 2 sfEe~l~~Le~Iv~~LE~~ 20 (67)
T TIGR01280 2 SFEEALSELEQIVQKLESG 20 (67)
T ss_pred CHHHHHHHHHHHHHHHHCC
Confidence 5677777788777777654
No 457
>PF06288 DUF1040: Protein of unknown function (DUF1040); InterPro: IPR009383 This family consists of several bacterial YihD proteins of unknown function [].; PDB: 2KO6_A.
Probab=48.25 E-value=47 Score=18.29 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=21.3
Q ss_pred HHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 115 CLSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 115 ~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
-..++++++.--|+.+|+-| +++.|.++.+
T Consensus 5 R~nELLELL~p~Wqk~pDLn-----L~Q~LqkLa~ 34 (86)
T PF06288_consen 5 RLNELLELLQPAWQKEPDLN-----LMQFLQKLAQ 34 (86)
T ss_dssp HHHHHHHHTHHHHHSSTTS------HHHHHHHHHH
T ss_pred hHHHHHHHhhHHHhcCCccc-----HHHHHHHHHH
Confidence 45678889999999999987 5555555543
No 458
>PF00250 Fork_head: Fork head domain; InterPro: IPR001766 The fork head protein of Drosophila melanogaster, a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors []. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [, , ]. The fork head domain binds B-DNA as a monomer [], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2UZK_A 2K86_A 1JXS_A 2C6Y_A 2A3S_A 2D2W_A 2KIU_A 1VTN_C 2A07_J 2AS5_F ....
Probab=45.50 E-value=34 Score=19.41 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=24.1
Q ss_pred HHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 119 IMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 119 ~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
...|+...+.-.|.++.|..||.+.++.--.
T Consensus 6 Y~~LI~~Ai~~sp~~~Ltl~eIy~~i~~~~p 36 (96)
T PF00250_consen 6 YATLIAMAILSSPDKRLTLSEIYEWIEENFP 36 (96)
T ss_dssp HHHHHHHHHHTSTTSEBEHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHhCCCCCccHHHHHHHHHHhhc
Confidence 3456777777799999999999988876543
No 459
>PRK14067 exodeoxyribonuclease VII small subunit; Provisional
Probab=45.36 E-value=42 Score=18.40 Aligned_cols=23 Identities=13% Similarity=0.219 Sum_probs=18.2
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhh
Q 035782 132 DQRIYMTDAAAKLKKIKEKFLDD 154 (159)
Q Consensus 132 ~~Rpt~~~ll~~l~~~~~~~~~~ 154 (159)
.+-.|+++.++.|++|++++.+.
T Consensus 4 ~k~~sfEeal~~LEeIV~~LE~~ 26 (80)
T PRK14067 4 KKTADFEQQLARLQEIVDALEGG 26 (80)
T ss_pred cccCCHHHHHHHHHHHHHHHHCC
Confidence 34478899999999999888654
No 460
>PF13314 DUF4083: Domain of unknown function (DUF4083)
Probab=45.05 E-value=43 Score=17.01 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=22.5
Q ss_pred HHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782 122 LALDCCMESPDQRIYMTDAAAKLKKIKEKFL 152 (159)
Q Consensus 122 l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~ 152 (159)
++++.++.++.+--+..++.+.|.++.+.++
T Consensus 26 ~IRri~~~s~~kkq~~~~~eqKLDrIIeLLE 56 (58)
T PF13314_consen 26 FIRRILINSNAKKQDVDSMEQKLDRIIELLE 56 (58)
T ss_pred HHHHHHHhccccccchhHHHHHHHHHHHHHc
Confidence 5677777777777666678888888877654
No 461
>PRK14068 exodeoxyribonuclease VII small subunit; Provisional
Probab=44.62 E-value=35 Score=18.46 Aligned_cols=22 Identities=14% Similarity=0.253 Sum_probs=17.6
Q ss_pred CCcHHHHHHHHHHHHHHhhhhh
Q 035782 134 RIYMTDAAAKLKKIKEKFLDDV 155 (159)
Q Consensus 134 Rpt~~~ll~~l~~~~~~~~~~~ 155 (159)
-.|+++.++.|+.|++++.+.-
T Consensus 5 ~~sfEeal~~Le~IV~~LE~gd 26 (76)
T PRK14068 5 TQSFEEMMQELEQIVQKLDNET 26 (76)
T ss_pred ccCHHHHHHHHHHHHHHHHcCC
Confidence 4688999999999998876543
No 462
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=44.51 E-value=14 Score=15.32 Aligned_cols=16 Identities=31% Similarity=0.322 Sum_probs=11.8
Q ss_pred cCCCCceEEcccccce
Q 035782 3 LDEDMVAHVSDFGISK 18 (159)
Q Consensus 3 i~~~~~~kl~Dfg~~~ 18 (159)
++.+|.+-++|.+..+
T Consensus 9 v~~~g~i~VaD~~n~r 24 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHR 24 (28)
T ss_dssp EETTSEEEEEECCCTE
T ss_pred EeCCCCEEEEECCCCE
Confidence 5677888888877554
No 463
>COG4663 FcbT1 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=43.39 E-value=32 Score=24.31 Aligned_cols=37 Identities=11% Similarity=0.181 Sum_probs=28.8
Q ss_pred HhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhhhccCC
Q 035782 123 ALDCCMESPDQRIYMTDAAAKLKKIKEKFLDDVASTN 159 (159)
Q Consensus 123 ~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~~~~~~ 159 (159)
++.+....-.-||...+|++.+.+...+++.+++.+|
T Consensus 293 ~~~l~~~g~klr~f~~eIl~a~~e~~~e~~ae~aa~n 329 (363)
T COG4663 293 LKELVAEGAKLRPFSQEILKACREASDEVYAEKAAKN 329 (363)
T ss_pred HHHHHhCCceeccCCHHHHHHHHHHHHHHHHHHhccC
Confidence 3344455567789999999999999999888887765
No 464
>PF02912 Phe_tRNA-synt_N: Aminoacyl tRNA synthetase class II, N-terminal domain; InterPro: IPR004188 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. Phenylalanyl-tRNA synthetase from Thermus thermophilus has an alpha 2 beta 2 type quaternary structure and is one of the most complicated members of the synthetase family. Identification of phenylalanyl-tRNA synthetase as a member of class II aaRSs was based only on sequence alignment of the small alpha-subunit with other synthetases []. This is the N-terminal domain of phenylalanyl-tRNA synthetase.; GO: 0000166 nucleotide binding, 0004826 phenylalanine-tRNA ligase activity, 0005524 ATP binding, 0006432 phenylalanyl-tRNA aminoacylation, 0005737 cytoplasm; PDB: 3PCO_C 1EIY_A 2RHS_C 2RHQ_A 2IY5_A.
Probab=43.12 E-value=4.2 Score=21.70 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=23.1
Q ss_pred HHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782 122 LALDCCMESPDQRIYMTDAAAKLKKIKEKFLD 153 (159)
Q Consensus 122 l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~ 153 (159)
++..+=..+|++||.+...+..++.-.+...+
T Consensus 26 ~~k~l~~l~~eek~~~G~~iN~~K~~i~~~~~ 57 (73)
T PF02912_consen 26 LLKQLKKLPPEEKPEFGKKINELKQEIEEALE 57 (73)
T ss_dssp CTCTTTTCGGCTTTHHHHCCHHHHCHHCHHHH
T ss_pred HHHHhhCCCHHHhHHHHHHHHHHHHHHHHHHH
Confidence 45566677999999999888777665554443
No 465
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=43.12 E-value=14 Score=27.00 Aligned_cols=19 Identities=37% Similarity=0.571 Sum_probs=16.5
Q ss_pred CccCCCCceEEcccccceec
Q 035782 1 ILLDEDMVAHVSDFGISKLL 20 (159)
Q Consensus 1 ili~~~~~~kl~Dfg~~~~~ 20 (159)
|||+ +|.+.|+||.+++.-
T Consensus 353 iLId-~GnvtLIDfklsRl~ 371 (488)
T COG5072 353 ILID-EGNVTLIDFKLSRLS 371 (488)
T ss_pred eeee-cCceEEEEeeeeecc
Confidence 6788 899999999999853
No 466
>PRK14063 exodeoxyribonuclease VII small subunit; Provisional
Probab=42.44 E-value=47 Score=17.98 Aligned_cols=22 Identities=14% Similarity=0.353 Sum_probs=16.7
Q ss_pred CCCcHHHHHHHHHHHHHHhhhh
Q 035782 133 QRIYMTDAAAKLKKIKEKFLDD 154 (159)
Q Consensus 133 ~Rpt~~~ll~~l~~~~~~~~~~ 154 (159)
+..|+++.+..|+.|++.+.+.
T Consensus 3 ~~~sfEeal~~LE~Iv~~LE~~ 24 (76)
T PRK14063 3 NKLSFEEAISQLEHLVSKLEQG 24 (76)
T ss_pred cccCHHHHHHHHHHHHHHHHCC
Confidence 3467888888888888887654
No 467
>PF12263 DUF3611: Protein of unknown function (DUF3611); InterPro: IPR022051 This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.
Probab=42.40 E-value=43 Score=21.65 Aligned_cols=26 Identities=23% Similarity=0.192 Sum_probs=19.8
Q ss_pred HHHhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 121 HLALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 121 ~l~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
.+.++.-..+|+.||+-.|+.+.|+.
T Consensus 81 Rlar~L~~~~~~~~P~k~~~~~~l~~ 106 (183)
T PF12263_consen 81 RLARRLRSPNPAKRPSKADVVRLLRI 106 (183)
T ss_pred HHHHHhcccCCCCCCCHHHHHHHHHH
Confidence 34455556799999999999988764
No 468
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=40.00 E-value=18 Score=27.67 Aligned_cols=21 Identities=33% Similarity=0.351 Sum_probs=16.9
Q ss_pred CccCCCC----ceEEcccccceecC
Q 035782 1 ILLDEDM----VAHVSDFGISKLLG 21 (159)
Q Consensus 1 ili~~~~----~~kl~Dfg~~~~~~ 21 (159)
|+++.+| .+++.|||++..+.
T Consensus 291 Ilv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 291 IFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred eEEecCCCCCCeEEEEecceEEECC
Confidence 4667676 99999999998764
No 469
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=39.96 E-value=68 Score=23.36 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=24.8
Q ss_pred HHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhhhh
Q 035782 116 LSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFLDD 154 (159)
Q Consensus 116 ~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~~~ 154 (159)
...-++-++.||+.||+..- +---.+.|+.+.+++.+.
T Consensus 239 ~~~sL~~iRECLKldpdHK~-Cf~~YKklkKv~K~les~ 276 (504)
T KOG0624|consen 239 AENSLKEIRECLKLDPDHKL-CFPFYKKLKKVVKSLESA 276 (504)
T ss_pred HHHHHHHHHHHHccCcchhh-HHHHHHHHHHHHHHHHHH
Confidence 45567779999999998653 333555666666555443
No 470
>smart00580 PUG domain in protein kinases, N-glycanases and other nuclear proteins.
Probab=39.27 E-value=36 Score=17.24 Aligned_cols=19 Identities=16% Similarity=0.188 Sum_probs=14.4
Q ss_pred cHHHHHHHHHHHHHHhhhh
Q 035782 136 YMTDAAAKLKKIKEKFLDD 154 (159)
Q Consensus 136 t~~~ll~~l~~~~~~~~~~ 154 (159)
+..++++.++++.+.+.+.
T Consensus 2 sv~dLLr~irNi~~hp~e~ 20 (58)
T smart00580 2 SVRDLLRALRNILHHPREE 20 (58)
T ss_pred cHHHHHHHHHHHhhCcchh
Confidence 4567888888888877765
No 471
>PF02173 pKID: pKID domain; InterPro: IPR003102 The nuclear factor CREB activates transcription of target genes in part through direct interactions with the KIX domain of the coactivator CBP in a phosphorylation-dependent manner. CBP and P300 bind to the pKID (phosphorylated kinase-inducible-domain) domain of CREB [].; GO: 0005515 protein binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1KDX_B.
Probab=37.99 E-value=44 Score=15.65 Aligned_cols=13 Identities=15% Similarity=0.107 Sum_probs=10.5
Q ss_pred CCCcHHHHHHHHH
Q 035782 133 QRIYMTDAAAKLK 145 (159)
Q Consensus 133 ~Rpt~~~ll~~l~ 145 (159)
+||+...|+..|.
T Consensus 18 RRPSYRKIlndLs 30 (41)
T PF02173_consen 18 RRPSYRKILNDLS 30 (41)
T ss_dssp TSTHHHHHHHHHH
T ss_pred hCchHHHHHHHhc
Confidence 7999888887774
No 472
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=37.26 E-value=30 Score=12.99 Aligned_cols=23 Identities=17% Similarity=0.147 Sum_probs=14.9
Q ss_pred hhhcCCCCCCCCcHHHHHHHHHH
Q 035782 124 LDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 124 ~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
...+..+...+.+..++...+.+
T Consensus 6 f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 6 FRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHCCCCCCcEeHHHHHHHHHh
Confidence 34445666677888877766654
No 473
>PRK14069 exodeoxyribonuclease VII small subunit; Provisional
Probab=37.20 E-value=53 Score=18.72 Aligned_cols=22 Identities=32% Similarity=0.454 Sum_probs=17.0
Q ss_pred CCCcHHHHHHHHHHHHHHhhhh
Q 035782 133 QRIYMTDAAAKLKKIKEKFLDD 154 (159)
Q Consensus 133 ~Rpt~~~ll~~l~~~~~~~~~~ 154 (159)
+-.|+++.++.|+.|++.+.+.
T Consensus 6 ~~~sFEeal~~LEeIV~~LEsg 27 (95)
T PRK14069 6 SKISFEDALRELEQIAEKLERQ 27 (95)
T ss_pred CCCCHHHHHHHHHHHHHHHHCC
Confidence 3567888888888888887654
No 474
>cd07981 TAF12 TATA Binding Protein (TBP) Associated Factor 12 (TAF12) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex. The TATA Binding Protein (TBP) Associated Factor 12 (TAF12) is one of several TAFs that bind TBP and are involved in forming the TFIID complex. TFIID is one of the seven General Transcription Factors (GTFs) (TFIIA, TFIIB, TFIID, TFIIE, TFIIF, and TFIID) that are involved in accurate initiation of transcription by RNA polymerase II in eukaryotes. TFIID plays an important role in the recognition of promoter DNA and assembly of the pre-initiation complex. TFIID complex is composed of the TBP and at least 13 TAFs. TAFs are named after their electrophoretic mobility in polyacrylamide gels in different species. A new, unified nomenclature has been suggested for the pol II TAFs to show the relationship between TAF orthologs and paralogs. Several hypotheses are proposed for TAFs function such as serving as activator-bind
Probab=35.78 E-value=72 Score=16.89 Aligned_cols=28 Identities=29% Similarity=0.485 Sum_probs=18.2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhhhhhc
Q 035782 128 MESPDQRIYMTDAAAKLKKIKEKFLDDVA 156 (159)
Q Consensus 128 ~~~p~~Rpt~~~ll~~l~~~~~~~~~~~~ 156 (159)
+.||..|.+ .++...|.++.+.+.++.+
T Consensus 13 ~id~~~~~~-~da~~~l~~~~e~fv~~v~ 40 (72)
T cd07981 13 EIDPREQLD-PDVEELLLEIADDFVDDVV 40 (72)
T ss_pred hhCCCCCcC-HHHHHHHHHHHHHHHHHHH
Confidence 347777777 4466667777776666544
No 475
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyse alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. ; PDB: 2Y4S_A 2FH8_A 2FH6_A 2Y5E_A 2FHC_A 2FHB_A 2FHF_A 2FGZ_A.
Probab=34.73 E-value=1e+02 Score=19.69 Aligned_cols=30 Identities=20% Similarity=0.063 Sum_probs=17.4
Q ss_pred HHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 120 MHLALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 120 ~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
|.++...+ .||..+|+.+++....+..++-
T Consensus 21 W~~i~~ll-~d~~~kP~~~~I~~a~~~f~el 50 (168)
T PF11852_consen 21 WPLIRPLL-ADPALKPSPADIAAASAYFQEL 50 (168)
T ss_dssp HHHHHHHH-CTCCGS--HHHHHHHHHHHHHH
T ss_pred hhhhhhhc-cCCccCCCHHHHHHHHHHHHHH
Confidence 44444444 6888888888886655554443
No 476
>COG3084 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.42 E-value=79 Score=16.98 Aligned_cols=29 Identities=21% Similarity=0.334 Sum_probs=20.7
Q ss_pred HHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 035782 116 LSSIMHLALDCCMESPDQRIYMTDAAAKLKKIKE 149 (159)
Q Consensus 116 ~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~ 149 (159)
..++++++.-.|+.+|+-. +++.|+.+.+
T Consensus 6 lnevlellqp~w~k~~dln-----l~q~lqkla~ 34 (88)
T COG3084 6 LNEVIELLQPAWQKEPDLN-----LLQFLQKLAK 34 (88)
T ss_pred HHHHHHHhhHHhccCCCcc-----HHHHHHHHHH
Confidence 4568888999999999854 5555555543
No 477
>PRK14066 exodeoxyribonuclease VII small subunit; Provisional
Probab=33.50 E-value=63 Score=17.43 Aligned_cols=19 Identities=21% Similarity=0.265 Sum_probs=14.2
Q ss_pred cHHHHHHHHHHHHHHhhhh
Q 035782 136 YMTDAAAKLKKIKEKFLDD 154 (159)
Q Consensus 136 t~~~ll~~l~~~~~~~~~~ 154 (159)
++++.+..|++|++++...
T Consensus 5 ~fEeal~~LE~IV~~LE~g 23 (75)
T PRK14066 5 KFETALKKLEEVVKKLEGG 23 (75)
T ss_pred cHHHHHHHHHHHHHHHHCC
Confidence 5778888888888877653
No 478
>PF04433 SWIRM: SWIRM domain; InterPro: IPR007526 The SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in eukaryotic chromosomal proteins. It is named after the proteins SWI3, RSC8 and MOIRA in which it was first recognised. This domain is predicted to mediate protein-protein interactions in the assembly of chromatin-protein complexes. The SWIRM domain can be linked to different domains, such as the ZZ-type zinc finger (IPR000433 from INTERPRO), the Myb DNA-binding domain (IPR001005 from INTERPRO), the HORMA domain (IPR003511 from INTERPRO), the amino-oxidase domain, the chromo domain (IPR000953 from INTERPRO), and the JAB1/PAD1 domain.; GO: 0005515 protein binding; PDB: 2Z3Y_A 2UXN_A 2Y48_A 2HKO_A 2XAF_A 2X0L_A 2XAJ_A 2UXX_A 2V1D_A 2L3D_A ....
Probab=32.90 E-value=37 Score=18.59 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 114 DCLSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 114 ~~~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
+....+.+.+...|..+|.+..|..++.+.+.
T Consensus 33 ~~Yl~iRn~il~~w~~n~~~~lt~~~~~~~i~ 64 (86)
T PF04433_consen 33 EQYLKIRNTILAEWRKNPNKYLTKTDARKLIK 64 (86)
T ss_dssp HHHHHHHHHHHHHHHHHTTS---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCCcccHHHHHHHcc
Confidence 56678889999999999999999999976665
No 479
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=31.16 E-value=74 Score=15.61 Aligned_cols=16 Identities=31% Similarity=0.464 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHhhh
Q 035782 138 TDAAAKLKKIKEKFLD 153 (159)
Q Consensus 138 ~~ll~~l~~~~~~~~~ 153 (159)
++.+..|+.|.+++.+
T Consensus 2 Ee~~~~Le~Iv~~Le~ 17 (53)
T PF02609_consen 2 EEAMERLEEIVEKLES 17 (53)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 3455556666555544
No 480
>PF11695 DUF3291: Domain of unknown function (DUF3291); InterPro: IPR021708 This bacterial family of proteins has no known function.
Probab=30.47 E-value=74 Score=19.58 Aligned_cols=28 Identities=11% Similarity=0.199 Sum_probs=23.3
Q ss_pred HhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 035782 123 ALDCCMESPDQRIYMTDAAAKLKKIKEK 150 (159)
Q Consensus 123 ~~~cl~~~p~~Rpt~~~ll~~l~~~~~~ 150 (159)
..-+|-.....|||..|.+.+|+.+.+.
T Consensus 100 ~~vlWWVp~G~~Pt~~EA~~RL~~L~~h 127 (140)
T PF11695_consen 100 HFVLWWVPAGHRPTWQEAVERLEHLRDH 127 (140)
T ss_pred eEEEEECCCCCCCCHHHHHHHHHHHHHh
Confidence 3446777888999999999999988765
No 481
>PHA01632 hypothetical protein
Probab=30.47 E-value=81 Score=15.87 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=15.4
Q ss_pred CCCcHHHHHHHHHHHHHHhh
Q 035782 133 QRIYMTDAAAKLKKIKEKFL 152 (159)
Q Consensus 133 ~Rpt~~~ll~~l~~~~~~~~ 152 (159)
+.||-+|+.+.|-.+++.+.
T Consensus 26 ~kpteeelrkvlpkilkdya 45 (64)
T PHA01632 26 QKPTEEELRKVLPKILKDYA 45 (64)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 47888888888888877664
No 482
>PF08403 AA_permease_N: Amino acid permease N-terminal; InterPro: IPR013612 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [, , ]. These proteins appear to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found to the N terminus of the amino acid permease domain (IPR004841 from INTERPRO) in metazoan Na-K-Cl cotransporters.
Probab=29.56 E-value=43 Score=18.08 Aligned_cols=15 Identities=20% Similarity=0.248 Sum_probs=12.0
Q ss_pred CCCcHHHHHHHHHHH
Q 035782 133 QRIYMTDAAAKLKKI 147 (159)
Q Consensus 133 ~Rpt~~~ll~~l~~~ 147 (159)
.|||..+|-..+++-
T Consensus 39 ~RPSL~~Lh~~~~~~ 53 (74)
T PF08403_consen 39 SRPSLDELHSQLEKD 53 (74)
T ss_pred CCCCHHHHHHHhhcC
Confidence 699999888877663
No 483
>COG3382 Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]
Probab=28.84 E-value=1.1e+02 Score=20.66 Aligned_cols=28 Identities=11% Similarity=-0.127 Sum_probs=20.8
Q ss_pred HHHHHHhhhcCCCCC-CCCcHHHHHHHHH
Q 035782 118 SIMHLALDCCMESPD-QRIYMTDAAAKLK 145 (159)
Q Consensus 118 ~~~~l~~~cl~~~p~-~Rpt~~~ll~~l~ 145 (159)
..+.-..+-+..+|. .||+++.+++.+.
T Consensus 64 ~awr~~y~~~g~kp~k~r~S~EALlrRv~ 92 (229)
T COG3382 64 KAWRDAYWRFGIKPTKTRPSAEALLRRVL 92 (229)
T ss_pred HHHHHHHHHhCCCcCCCCCcHHHHHHHHH
Confidence 444455667788998 8999998887764
No 484
>PF08972 DUF1902: Domain of unknown function (DUF1902); InterPro: IPR015066 Members of these prokaryotic proteins adopt a fold consisting of one alpha-helix and four beta-strands. Their function has not, as yet, been elucidated []. ; PDB: 1WV8_A.
Probab=28.79 E-value=88 Score=15.73 Aligned_cols=24 Identities=13% Similarity=0.156 Sum_probs=17.6
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhc
Q 035782 133 QRIYMTDAAAKLKKIKEKFLDDVA 156 (159)
Q Consensus 133 ~Rpt~~~ll~~l~~~~~~~~~~~~ 156 (159)
+-+|..++.++++.+..++++..-
T Consensus 27 EA~Tle~L~~kl~~~ipeLLelN~ 50 (54)
T PF08972_consen 27 EADTLEELIEKLRVMIPELLELNG 50 (54)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHS-
T ss_pred cCccHHHHHHHHHHHHHHHHHhcC
Confidence 346788888888888888776543
No 485
>PF14954 LIX1: Limb expression 1
Probab=28.29 E-value=1.3e+02 Score=20.15 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=28.8
Q ss_pred HHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHhh
Q 035782 119 IMHLALDCCMESPDQRIYMTDAAAKLKKIKEKFL 152 (159)
Q Consensus 119 ~~~l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~~ 152 (159)
-..||..-++.-|++|+|.+=+.+.+++....+.
T Consensus 89 KiALmNSvfNEhPsRrIt~eFi~ksv~eA~~s~~ 122 (252)
T PF14954_consen 89 KIALMNSVFNEHPSRRITDEFIEKSVQEAVASFS 122 (252)
T ss_pred HHHHHHHHHhcCCcccccHHHHHHHHHHHHHhcC
Confidence 4567889999999999999988888888877654
No 486
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=27.88 E-value=79 Score=14.90 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=10.0
Q ss_pred CcHHHHHHHHHHHHHHhh
Q 035782 135 IYMTDAAAKLKKIKEKFL 152 (159)
Q Consensus 135 pt~~~ll~~l~~~~~~~~ 152 (159)
-|.+|+++.+++....++
T Consensus 29 ~t~eea~~~~~eal~~~l 46 (48)
T PF03681_consen 29 DTLEEALENAKEALELWL 46 (48)
T ss_dssp SSHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 345566666665555544
No 487
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=27.53 E-value=38 Score=21.98 Aligned_cols=19 Identities=26% Similarity=0.429 Sum_probs=11.2
Q ss_pred Ccc-CCCCceEEccccccee
Q 035782 1 ILL-DEDMVAHVSDFGISKL 19 (159)
Q Consensus 1 ili-~~~~~~kl~Dfg~~~~ 19 (159)
||+ +.++.++++||..|..
T Consensus 155 il~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 155 ILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEETSSSSCEEE--GTT-EE
T ss_pred EEeccCCCeEEEecHHHHhh
Confidence 345 5778889999887744
No 488
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=26.73 E-value=64 Score=13.49 Aligned_cols=24 Identities=21% Similarity=0.200 Sum_probs=18.2
Q ss_pred HhhhcCCCCCCCCcHHHHHHHHHH
Q 035782 123 ALDCCMESPDQRIYMTDAAAKLKK 146 (159)
Q Consensus 123 ~~~cl~~~p~~Rpt~~~ll~~l~~ 146 (159)
+.+....|-+...+..|+...+.+
T Consensus 5 ~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 5 AFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHCCCCCCcCCHHHHHHHHHh
Confidence 455667788888888888877765
No 489
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=26.65 E-value=36 Score=22.33 Aligned_cols=13 Identities=23% Similarity=0.373 Sum_probs=10.2
Q ss_pred CceEEccccccee
Q 035782 7 MVAHVSDFGISKL 19 (159)
Q Consensus 7 ~~~kl~Dfg~~~~ 19 (159)
+.+.++|||++.+
T Consensus 128 ~~i~~IDfGLg~~ 140 (204)
T COG3642 128 GRIYFIDFGLGEF 140 (204)
T ss_pred CcEEEEECCcccc
Confidence 3488999999864
No 490
>PHA02602 56 dCTP pyrophosphatase; Provisional
Probab=26.04 E-value=83 Score=19.90 Aligned_cols=27 Identities=15% Similarity=0.132 Sum_probs=18.4
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhhh
Q 035782 127 CMESPDQRIYMTDAAAKLKKIKEKFLD 153 (159)
Q Consensus 127 l~~~p~~Rpt~~~ll~~l~~~~~~~~~ 153 (159)
|.++|...-|+.++++++++.-.-+.+
T Consensus 53 ~~~~p~~l~t~ge~l~W~~~~~~ai~d 79 (172)
T PHA02602 53 YNPHPDELKTCGEILDWLRNQDDYIAD 79 (172)
T ss_pred cCCCchhHHHhhHHHHHHHHHHHHHHH
Confidence 455677777888888777766554444
No 491
>PF07010 Endomucin: Endomucin; InterPro: IPR010740 This family consists of several mammalian endomucin proteins. Endomucin is an early endothelial-specific antigen that is also expressed on putative hematopoietic progenitor cells.
Probab=25.78 E-value=57 Score=21.89 Aligned_cols=17 Identities=18% Similarity=0.305 Sum_probs=13.7
Q ss_pred HHHHHHHhhhcCCCCCC
Q 035782 117 SSIMHLALDCCMESPDQ 133 (159)
Q Consensus 117 ~~~~~l~~~cl~~~p~~ 133 (159)
-.++.|.+.||+.||..
T Consensus 205 f~LvgLyr~C~k~dPg~ 221 (259)
T PF07010_consen 205 FTLVGLYRMCWKTDPGT 221 (259)
T ss_pred HHHHHHHHHhhcCCCCC
Confidence 35677889999999973
No 492
>smart00544 MA3 Domain in DAP-5, eIF4G, MA-3 and other proteins. Highly alpha-helical. May contain repeats and/or regions similar to MIF4G domains Ponting (TIBS) "Novel eIF4G domain homologues" in press
Probab=25.55 E-value=89 Score=17.86 Aligned_cols=30 Identities=13% Similarity=-0.040 Sum_probs=17.7
Q ss_pred HHHHHHHHhhhcCCCCCCCCcHHHHHHHHH
Q 035782 116 LSSIMHLALDCCMESPDQRIYMTDAAAKLK 145 (159)
Q Consensus 116 ~~~~~~l~~~cl~~~p~~Rpt~~~ll~~l~ 145 (159)
+.-+..++..|++.+...|+-+..++..|.
T Consensus 35 ~~vv~~~i~~~le~~~~~~~~~~~Ll~~L~ 64 (113)
T smart00544 35 HEVVKVLLTCALEEKRTYREMYSVLLSRLC 64 (113)
T ss_pred HHHHHHHHHHHHcCCccHHHHHHHHHHHHH
Confidence 344555566666665666666666665554
No 493
>PF15361 RIC3: Resistance to inhibitors of cholinesterase homologue 3
Probab=24.47 E-value=67 Score=20.06 Aligned_cols=15 Identities=27% Similarity=0.656 Sum_probs=11.5
Q ss_pred hhhHhHHHHHHHHHh
Q 035782 53 CDVYSYGVLLMETFT 67 (159)
Q Consensus 53 ~dv~s~g~~~~~~~~ 67 (159)
.=+|.+|+++|.+.+
T Consensus 86 mPlYtiGI~~f~lY~ 100 (152)
T PF15361_consen 86 MPLYTIGIVLFILYT 100 (152)
T ss_pred hHHHHHHHHHHHHHH
Confidence 447999999887654
No 494
>PF13713 BRX_N: Transcription factor BRX N-terminal domain
Probab=24.28 E-value=92 Score=14.44 Aligned_cols=26 Identities=4% Similarity=0.042 Sum_probs=17.6
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhhh
Q 035782 130 SPDQRIYMTDAAAKLKKIKEKFLDDV 155 (159)
Q Consensus 130 ~p~~Rpt~~~ll~~l~~~~~~~~~~~ 155 (159)
+.++++.+.|+++.|-.-++.+.+..
T Consensus 3 Eaak~kaaKe~IKsLt~QlK~maekl 28 (39)
T PF13713_consen 3 EAAKCKAAKEVIKSLTAQLKDMAEKL 28 (39)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhC
Confidence 45677788888877766666655543
No 495
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=23.96 E-value=87 Score=25.04 Aligned_cols=17 Identities=18% Similarity=0.333 Sum_probs=15.2
Q ss_pred HHHHhhhcCCCCCCCCc
Q 035782 120 MHLALDCCMESPDQRIY 136 (159)
Q Consensus 120 ~~l~~~cl~~~p~~Rpt 136 (159)
.++++.|+..+|++|-+
T Consensus 257 RD~VReCLEKeP~drtd 273 (1283)
T KOG3542|consen 257 RDSVRECLEKEPSDRTD 273 (1283)
T ss_pred hHHHHHHHhcCCcccch
Confidence 67899999999999965
No 496
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=23.52 E-value=1.3e+02 Score=15.93 Aligned_cols=24 Identities=21% Similarity=0.183 Sum_probs=17.0
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhc
Q 035782 133 QRIYMTDAAAKLKKIKEKFLDDVA 156 (159)
Q Consensus 133 ~Rpt~~~ll~~l~~~~~~~~~~~~ 156 (159)
+.-|.+++++.+++..+.+.+...
T Consensus 29 ~G~T~eea~~n~~eai~l~~e~~~ 52 (73)
T COG1598 29 QGETLEEALQNAKEAIELHLEALL 52 (73)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 566777777777777777766543
No 497
>PF08696 Dna2: DNA replication factor Dna2; InterPro: IPR014808 Dna2 is a DNA replication factor with single-stranded DNA-dependent ATPase, ATP-dependent nuclease, (5'-flap endonuclease) and helicase activities. It is required for Okazaki fragment processing and is involved in DNA repair pathways []. ; GO: 0003677 DNA binding, 0004003 ATP-dependent DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication
Probab=23.44 E-value=2e+02 Score=18.96 Aligned_cols=22 Identities=18% Similarity=0.302 Sum_probs=10.3
Q ss_pred CCcHHHHHHHHHHHHHHhhhhh
Q 035782 134 RIYMTDAAAKLKKIKEKFLDDV 155 (159)
Q Consensus 134 Rpt~~~ll~~l~~~~~~~~~~~ 155 (159)
+.+...+.+.++++.+++..++
T Consensus 109 ~~~~~~l~~~~~~~l~~~~~~l 130 (209)
T PF08696_consen 109 DFDLEFLEELADRILEKYLEEL 130 (209)
T ss_pred CcchHHHHHHHHHHHHHHHHHH
Confidence 3444444455555544444443
No 498
>PF11108 Phage_glycop_gL: Viral glycoprotein L; InterPro: IPR020175 Herpesviruses are enveloped by a lipid bilayer that contains at least a dozen glycoproteins. The virion surface glycoproteins mediate recognition of susceptible cells and promote fusion of the viral envelope with the cell membrane, leading to virus entry. No single glycoprotein associated with the virion membrane has been identified as the fusogen []. Glycoprotein L (gL) forms a non-covalently linked heterodimer with glycoprotein H (gH). This heterodimer is essential for virus-cell and cell-cell fusion since the association of gH and gL is necessary for correct localisation of gH to the virion or cell surface. gH anchoring the heterodimer to the plasma membrane through its transmembrane domain. gL lacks a transmembrane domain and is secreted from cells when expressed in the absence of gH [].; PDB: 3PHF_N.
Probab=23.31 E-value=1.7e+02 Score=17.25 Aligned_cols=26 Identities=15% Similarity=0.304 Sum_probs=19.8
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhccC
Q 035782 133 QRIYMTDAAAKLKKIKEKFLDDVAST 158 (159)
Q Consensus 133 ~Rpt~~~ll~~l~~~~~~~~~~~~~~ 158 (159)
-++-..+++..|+.++.++.++....
T Consensus 74 ~~~~~~~lln~L~~~~~~F~~~f~~~ 99 (111)
T PF11108_consen 74 TPPEDLELLNHLQRLKDSFLEKFSAV 99 (111)
T ss_dssp --THHHHHHHHHHHHHTTSGGGGGGS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34567789999999999998877654
No 499
>PF10790 DUF2604: Protein of Unknown function (DUF2604); InterPro: IPR019726 This entry represents bacterial proteins with undetermined function.
Probab=22.86 E-value=41 Score=17.49 Aligned_cols=9 Identities=44% Similarity=0.955 Sum_probs=6.6
Q ss_pred EEcccccce
Q 035782 10 HVSDFGISK 18 (159)
Q Consensus 10 kl~Dfg~~~ 18 (159)
|+.|||+.-
T Consensus 54 KveD~Gftn 62 (76)
T PF10790_consen 54 KVEDFGFTN 62 (76)
T ss_pred hhhhccccc
Confidence 788888753
No 500
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional
Probab=22.69 E-value=89 Score=24.31 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=0.0
Q ss_pred HHhhhcCCCCCCCCcHHHHHHHHHHHHHHh
Q 035782 122 LALDCCMESPDQRIYMTDAAAKLKKIKEKF 151 (159)
Q Consensus 122 l~~~cl~~~p~~Rpt~~~ll~~l~~~~~~~ 151 (159)
+|.+.+..+|+-|+-+.||...++++++++
T Consensus 29 v~~~~~~~~pelr~~~~ei~~~v~~~v~~v 58 (567)
T PRK04156 29 VMGKIMGENPELRSKAKEIIPIVKEVVEEV 58 (567)
T ss_pred hhhhhhccChhhhhhhhhHHHHHHHHHHHH
Done!