Query 035783
Match_columns 195
No_of_seqs 155 out of 1118
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 06:24:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035783.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035783hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02663 hydroxycinnamoyl-CoA: 100.0 4.6E-39 1E-43 275.8 14.9 176 1-180 233-426 (431)
2 PLN03157 spermidine hydroxycin 100.0 2.5E-38 5.4E-43 272.3 15.1 176 1-180 238-441 (447)
3 PLN00140 alcohol acetyltransfe 100.0 3.4E-38 7.3E-43 271.2 12.8 186 1-189 230-436 (444)
4 PLN02481 Omega-hydroxypalmitat 100.0 1E-37 2.3E-42 267.7 15.3 169 1-181 246-432 (436)
5 PF02458 Transferase: Transfer 100.0 5.1E-37 1.1E-41 262.7 11.9 178 2-185 236-432 (432)
6 PRK09294 acyltransferase PapA5 92.1 0.84 1.8E-05 39.1 7.9 113 2-125 219-347 (416)
7 PF08756 YfkB: YfkB-like domai 51.2 25 0.00054 25.7 3.5 41 14-55 44-91 (153)
8 PF12345 DUF3641: Protein of u 42.6 45 0.00097 24.1 3.7 62 63-136 31-94 (134)
9 COG1254 AcyP Acylphosphatases 38.6 37 0.00079 22.9 2.7 28 149-180 33-60 (92)
10 PF08252 Leader_CPA1: arg-2/CP 34.0 45 0.00097 16.3 1.8 17 14-30 7-23 (24)
11 PF00976 ACTH_domain: Corticot 28.4 23 0.0005 19.6 0.3 8 129-136 6-13 (39)
12 KOG1212 Amidases [Translation, 23.2 86 0.0019 28.4 3.1 21 13-33 67-87 (560)
No 1
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=100.00 E-value=4.6e-39 Score=275.75 Aligned_cols=176 Identities=22% Similarity=0.330 Sum_probs=146.4
Q ss_pred ChHHHHHHhhC--CCCcchhHHHHHHHHHHHHHhccC-C----------CCcccccc-----cccccccccccccchhhh
Q 035783 1 ISRLQQLASVN--GKKRTKVEAFSAYIWKIMVTSIDE-K----------HGKCKMGC-----YIGNVLSLAVGEASVTEL 62 (195)
Q Consensus 1 I~~LK~~a~~~--~~~~S~~d~l~A~iW~~~~rAr~~-~----------~~~~R~~~-----y~GN~~~~~~~~~~~~~l 62 (195)
|++||+++.+. ..++|+||+|+||+|+|++|||.. + +.|.|+.+ |+||+++.+.+.++++|+
T Consensus 233 i~~LK~~~~~~~~~~~~S~~dalsA~lW~~~~rA~~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~el 312 (431)
T PLN02663 233 LNTLKAKSKEDGNTISYSSYEMLAGHVWRSACKARGLPDDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPIAVAGEL 312 (431)
T ss_pred HHHHHhhCcccCCCcccchHHHHHHHHHhhhhhcccCCCccceEEEEEecCCcCCCCCCCCCcccceEEecccccchhhh
Confidence 57899998753 257999999999999999999972 2 34555653 999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCcCcccCCCCccccccccc
Q 035783 63 KQGSISEIASRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPVVELDFGFGSPVLGAVSS 142 (195)
Q Consensus 63 ~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~v~~~~ 142 (195)
.+.++..+|..||+++++++ ++|++++++|++..++...+..........++.+|||++|++|++|||||||+|+++..
T Consensus 313 ~~~~l~~~a~~ir~ai~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~ 391 (431)
T PLN02663 313 QSKPTWYAAGKIHDALVRMD-DDYLRSALDYLELQPDLSALVRGAHTFRCPNLGITSWVRLPIYDADFGWGRPIFMGPGG 391 (431)
T ss_pred hhCCHHHHHHHHHHHHHHhC-HHHHHHHHHHHHhCcccchhhcccCcCcCCcEEecccCCCCccccccCCCccccccccc
Confidence 99999999999999999999 99999999999876554322111111234579999999999999999999999998764
Q ss_pred cccCCceEEEEEecCCCCCCcEEEEEEecHHHHHhhhc
Q 035783 143 IIERSGVGYINQRPSAKCDGSWTVSAILWPELATALES 180 (195)
Q Consensus 143 ~~~~~~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~ 180 (195)
.. .+|.++++|+++++|+|+|+|+|++++|++|++
T Consensus 392 ~~---~~g~~~~~p~~~~~g~iev~v~L~~~~m~~f~~ 426 (431)
T PLN02663 392 IA---YEGLSFILPSPTNDGSLSVAISLQSEHMKLFEK 426 (431)
T ss_pred cc---CCCeEEEeccCCCCCcEEEEEECCHHHHHHHHH
Confidence 32 478999999988889999999999999999986
No 2
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=100.00 E-value=2.5e-38 Score=272.31 Aligned_cols=176 Identities=20% Similarity=0.288 Sum_probs=145.3
Q ss_pred ChHHHHHHhhC-----CCCcchhHHHHHHHHHHHHHhccC-C----------CCcccccc-----cccccccccccccch
Q 035783 1 ISRLQQLASVN-----GKKRTKVEAFSAYIWKIMVTSIDE-K----------HGKCKMGC-----YIGNVLSLAVGEASV 59 (195)
Q Consensus 1 I~~LK~~a~~~-----~~~~S~~d~l~A~iW~~~~rAr~~-~----------~~~~R~~~-----y~GN~~~~~~~~~~~ 59 (195)
|++||++|.+. +.++|+||+|+||+|+|++|||.. + |.|.|+.+ |+||+++.+.+..+.
T Consensus 238 i~~LK~~a~~~~~~~~~~~~St~dalsA~lWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~ 317 (447)
T PLN03157 238 VEKLKDKANESRSSDNGRPYTRYETVAGHVWRSACKARGHEPEQPTALGICVDSRSRMQPPLPDGYFGNATLDVIAESTS 317 (447)
T ss_pred HHHHHHhCcccccccCCCCccHHHHHHHHHHHHHHHHccCCCCCceEEEEEecCCCCCCCCCCCCcccceeeeccchhhH
Confidence 57899998742 357999999999999999999972 2 23555553 999999999988889
Q ss_pred hhhhcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhhcCCcchhh-hhc-----C-CCCCcEEEeecCCCCcCcccCCC
Q 035783 60 TELKQGSISEIASRVHDSITKVTNEAHFLDLIDWIECHRPGLMLAR-VVL-----G-RDGPAVLMSSGRRFPVVELDFGF 132 (195)
Q Consensus 60 ~~l~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~-~~~~~~~~ssw~~~~~y~~DFG~ 132 (195)
+|+.+.+|.++|..||+++++++ ++|++++++|++..++...... ... . .+..++.+|||+||++|++||||
T Consensus 318 ~el~~~~l~~~a~~Ir~ai~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFGw 396 (447)
T PLN03157 318 GELVSKPLGYASSKIREAIEKVT-NEYVQSAIDYLKNQEDLTRFQDLHALGGAEGPFYGNPNLGVVSWLTLPIYGLDFGW 396 (447)
T ss_pred HHHhhCCHHHHHHHHHHHHHHhH-HHHHHHHHHHHhhCccchhhhcccccccccccccCCCceEEeecccCCccccccCC
Confidence 99999999999999999999999 8999999999987654321110 000 0 12457999999999999999999
Q ss_pred CccccccccccccCCceEEEEEecCCCCCCcEEEEEEecHHHHHhhhc
Q 035783 133 GSPVLGAVSSIIERSGVGYINQRPSAKCDGSWTVSAILWPELATALES 180 (195)
Q Consensus 133 G~P~~v~~~~~~~~~~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~ 180 (195)
|||.|+++.... .+|.++++|++.++|+|+|.|+|++++|++|++
T Consensus 397 Gkp~~~~p~~~~---~~g~~~l~~~~~~~g~iev~v~L~~~~M~~f~~ 441 (447)
T PLN03157 397 GKEIYMGPGTHD---FDGDSLLLPGQNEDGSVILALCLQVAHMEAFKK 441 (447)
T ss_pred CccceecccccC---CCceEEEeecCCCCCcEEEEEEcCHHHHHHHHH
Confidence 999999986432 479999999998899999999999999999986
No 3
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=100.00 E-value=3.4e-38 Score=271.21 Aligned_cols=186 Identities=18% Similarity=0.230 Sum_probs=141.5
Q ss_pred ChHHHHHHhhC-CCCcchhHHHHHHHHHHHHHhcc---CC----------CCcccccc-----cccccccccccccchhh
Q 035783 1 ISRLQQLASVN-GKKRTKVEAFSAYIWKIMVTSID---EK----------HGKCKMGC-----YIGNVLSLAVGEASVTE 61 (195)
Q Consensus 1 I~~LK~~a~~~-~~~~S~~d~l~A~iW~~~~rAr~---~~----------~~~~R~~~-----y~GN~~~~~~~~~~~~~ 61 (195)
|++||+++.+. +.++|+||+|+||+|||++||++ +. +.|.|+.+ ||||++..+.+.++.+|
T Consensus 230 I~~LK~~~~~~~~~~~S~~e~vsA~iWr~~~rA~~~~~~~~~~~~~~~~vn~R~Rl~PpLP~~y~GN~i~~~~~~~~~~~ 309 (444)
T PLN00140 230 IATLRAKAKSKRVPNPSRIETLSCFIWKCCTAASRSISAAPRPSISVHAVNIRQRTKPPMSRYSIGNLFWWALAAADPAD 309 (444)
T ss_pred HHHHHHhcccccCCCCchhHHHHHHHHHHHHHHhhhccCCCCceEEEEEEeccccCCCCCCcccccchhhhheecccccc
Confidence 68999998753 45899999999999999999964 11 23455543 99999999998888888
Q ss_pred hhcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhhcCCcchhh--hhcCCCCCcEEEeecCCCCcCcccCCCCcccccc
Q 035783 62 LKQGSISEIASRVHDSITKVTNEAHFLDLIDWIECHRPGLMLAR--VVLGRDGPAVLMSSGRRFPVVELDFGFGSPVLGA 139 (195)
Q Consensus 62 l~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~v~ 139 (195)
+ ..+|.++|..||+++++++ ++|+++++++.+...-...... .........+.+|||+||++||+|||||||+|++
T Consensus 310 ~-~~~l~~~a~~Ir~~i~~~~-~e~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~ye~DFGwGkP~~v~ 387 (444)
T PLN00140 310 T-KIELNELVSLTRESIANYN-SDYLKSLQGENGLEGMSEYLNQLVGIFSEEPEIFLFSSWLNFGLNDVDFGWGKPIWVG 387 (444)
T ss_pred c-ccchHHHHHHHHHHHHHHH-HHHHHHhccchhHHHHHHHHHHHhhcccCCCceEEecccccCCccccccCCCCceeee
Confidence 6 5889999999999999999 9999998754221000000000 0001122345899999999999999999999998
Q ss_pred ccccccCCceEEEEEecCCCCCCcEEEEEEecHHHHHhhhcCCcccCCCc
Q 035783 140 VSSIIERSGVGYINQRPSAKCDGSWTVSAILWPELATALESDFIFQPMSS 189 (195)
Q Consensus 140 ~~~~~~~~~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~d~~~~~~~~ 189 (195)
+........+|.++++|+++ +||+||+|+|++++|++|++|+||....+
T Consensus 388 ~~~~~~~~~~~~~~l~~~~~-~~giev~v~L~~~~M~~f~~d~e~l~~~~ 436 (444)
T PLN00140 388 LLGEVGPAFRNLTVFKETGD-NNGIEAWITLDEKIMAILERDPEFLAFAT 436 (444)
T ss_pred cccccCCcccceEEEEecCC-CCeEEEEEecCHHHHHHHhhCHHHHhhcC
Confidence 86421112468899999875 46799999999999999999999987654
No 4
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=100.00 E-value=1e-37 Score=267.70 Aligned_cols=169 Identities=22% Similarity=0.329 Sum_probs=144.3
Q ss_pred ChHHHHHHhhC--CCCcchhHHHHHHHHHHHHHhccC-C----------CCcccccc-----cccccccccccccchhhh
Q 035783 1 ISRLQQLASVN--GKKRTKVEAFSAYIWKIMVTSIDE-K----------HGKCKMGC-----YIGNVLSLAVGEASVTEL 62 (195)
Q Consensus 1 I~~LK~~a~~~--~~~~S~~d~l~A~iW~~~~rAr~~-~----------~~~~R~~~-----y~GN~~~~~~~~~~~~~l 62 (195)
|++||+++... ..++|+||+|+||+|+|++||+.. + +.|.|+.+ |+||+++.+.+.++++|+
T Consensus 246 i~~LK~~a~~~~~~~~~S~~dal~A~iW~~~~rA~~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~~l 325 (436)
T PLN02481 246 LEKLKSMALEDGVIKKCSTFEALTAFVWRARTKALKMLPDQQTKLLFAVDGRSRFNPPLPKGYFGNGIVLTNALTTAGEL 325 (436)
T ss_pred HHHHHHhcccccCCCCcChHHHHHHHHHHHHHhccCCCCCCeEEEEEEEcCccCCCCCCCCCceeeeeeeccccccHHHH
Confidence 57899998743 357999999999999999999862 2 24556553 999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCcCcccCCCCccccccccc
Q 035783 63 KQGSISEIASRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPVVELDFGFGSPVLGAVSS 142 (195)
Q Consensus 63 ~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~v~~~~ 142 (195)
.+.+|+++|..||+++.+++ ++|++++++|++..++.. ....++.+|||++|++|++|||||+|+++++..
T Consensus 326 ~~~~l~~~A~~Ir~~i~~~~-~~~~~~~i~~~~~~~~~~--------~~~~~~~vssw~~~~~y~~DFG~G~P~~~~p~~ 396 (436)
T PLN02481 326 LENPLSHAVGLVQDAIKMVN-DGYMRSAIDYFEVTRARP--------SLASTLLITTWSRLSFHTTDFGWGEPVLSGPVG 396 (436)
T ss_pred hhCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCC--------CCCCcEEEEecCCCCcccccccCCccccccccc
Confidence 99999999999999999999 999999999998655432 124589999999999999999999999998764
Q ss_pred cccCCceEEEEEecCCCCCCcEEEEEEecHHHHHhhhcC
Q 035783 143 IIERSGVGYINQRPSAKCDGSWTVSAILWPELATALESD 181 (195)
Q Consensus 143 ~~~~~~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~d 181 (195)
.. .+|.++++|...++|||+|.|+|++++|++|+++
T Consensus 397 ~~---~~~~~~~~~~~~~~~gi~v~v~L~~~~M~~f~~~ 432 (436)
T PLN02481 397 LP---EKEVILFLSHGKERKSINVLLGLPASAMKTFQEL 432 (436)
T ss_pred cC---CCceEEEeccCCCCCcEEEEEECCHHHHHHHHHH
Confidence 32 3689999998777788999999999999999873
No 5
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=100.00 E-value=5.1e-37 Score=262.66 Aligned_cols=178 Identities=30% Similarity=0.450 Sum_probs=133.7
Q ss_pred hHHHHHHhhC-C-CCcchhHHHHHHHHHHHHHhccC-C----------CCcccccc-----cccccccccccccchhhhh
Q 035783 2 SRLQQLASVN-G-KKRTKVEAFSAYIWKIMVTSIDE-K----------HGKCKMGC-----YIGNVLSLAVGEASVTELK 63 (195)
Q Consensus 2 ~~LK~~a~~~-~-~~~S~~d~l~A~iW~~~~rAr~~-~----------~~~~R~~~-----y~GN~~~~~~~~~~~~~l~ 63 (195)
++||+++.+. . ...|+||+|+||+|||++|||.. . +.|.|+.+ |+||+++.+.+.++.+|+.
T Consensus 236 ~~lk~~~~~~~~~~~~St~d~l~A~lWr~~~rar~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~el~ 315 (432)
T PF02458_consen 236 KKLKSEALSSSSGKPVSTFDALTALLWRCITRARGLPSDETSRLSFAVDCRKRLNPPLPEGYFGNAVFFAFASATAGELL 315 (432)
T ss_dssp HHHHHHHSTTTSTT-S-HHHHHHHHHHHHHHHHHCHTTTTCEEEEEEEETHHHSSS---TTB-S--EEEEEEEEEHHHHH
T ss_pred HHHhhccccccCCCCCCeeEEEEEehhhhhccccccccccccccccccccCCCcCCCcceeecCceEeecccccchhhhh
Confidence 4566666543 2 23399999999999999999982 1 23445542 9999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhh-cChHHHHHHHHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCcCcccCCCCccccccccc
Q 035783 64 QGSISEIASRVHDSITK-VTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPVVELDFGFGSPVLGAVSS 142 (195)
Q Consensus 64 ~~~l~~~a~~ir~ai~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~v~~~~ 142 (195)
+.+|+.+|..||+++.+ ++ ++++++.++|++.+........ ....++++.+|||+++++|++|||||||+++++..
T Consensus 316 ~~~l~~~a~~ir~ai~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~~~~~~ 392 (432)
T PF02458_consen 316 SEPLSDIARLIREAIAKMVT-EEYVRSAIDWVESQSSRKLIPS--FFPGGPDVVVSSWRRFPFYEVDFGWGKPVAVRPPS 392 (432)
T ss_dssp HSHHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHC-CCCHTCCT--STCG-CEEEEEEETTSSGGG--TSSSS-SEEEECG
T ss_pred hhhhhHHHHhhhhhhhccch-HHHhhhhhcccccccccccccc--ccCcCCceeccccccCCCcccccCCCCceEEEccc
Confidence 99999999999999998 66 9999999999987532211110 11122789999999999999999999999999876
Q ss_pred cccCCceEEEEEecCCCCCCcEEEEEEecHHHHHhhhcCCccc
Q 035783 143 IIERSGVGYINQRPSAKCDGSWTVSAILWPELATALESDFIFQ 185 (195)
Q Consensus 143 ~~~~~~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~d~~~~ 185 (195)
.+. ++.++++|+++++||++|.|+|++++|++|++|+||.
T Consensus 393 ~~~---~~~~~~~p~~~~~ggvev~v~L~~~~M~~f~~d~e~~ 432 (432)
T PF02458_consen 393 PPR---GGGVFLLPSRGGDGGVEVWVCLPEEAMERFEKDFEFL 432 (432)
T ss_dssp CCS---TTEEEEEE-SSTTSSEEEEEEEEHHHHHHHHHHHH--
T ss_pred ccC---CCEEEEEccCCCcCcEEEEEECCHHHHhChhhcccCC
Confidence 542 4566999999778999999999999999999999873
No 6
>PRK09294 acyltransferase PapA5; Provisional
Probab=92.08 E-value=0.84 Score=39.06 Aligned_cols=113 Identities=14% Similarity=0.055 Sum_probs=66.3
Q ss_pred hHHHHHHhhCCCCcchhHHHHHHHHHHHHHhccCCCC--------ccccc--c-----cccccccccccccchhhhhcCC
Q 035783 2 SRLQQLASVNGKKRTKVEAFSAYIWKIMVTSIDEKHG--------KCKMG--C-----YIGNVLSLAVGEASVTELKQGS 66 (195)
Q Consensus 2 ~~LK~~a~~~~~~~S~~d~l~A~iW~~~~rAr~~~~~--------~~R~~--~-----y~GN~~~~~~~~~~~~~l~~~~ 66 (195)
++|++.|.+ ..+|.+++|.|.+|.++.+..+.++. +.|.. + +++|++.......... .+.+
T Consensus 219 ~~L~~~a~~--~~~t~~~~l~Aa~~~~l~r~~~~~~~~i~~~~pv~~R~~l~p~~~~~~~~n~~g~~~~~~~~~--~~~s 294 (416)
T PRK09294 219 SSLAAFGRR--HRLTVNALVSAAILLAEWQLRRTPHVPLPYVYPVDLRFRLTPPVAATEGTNLLGAATYLAEIG--PDTD 294 (416)
T ss_pred HHHHHHHHH--cCCcHHHHHHHHHHHHHHHhcCCCCCceeeecchhhHhhcCCCCCcccceeeEeeeeeecccc--CCCC
Confidence 456666654 35899999999999999888763221 22321 1 6677766544333333 2458
Q ss_pred HHHHHHHHHHHHhhcChHHHH-HHHHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCc
Q 035783 67 ISEIASRVHDSITKVTNEAHF-LDLIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPV 125 (195)
Q Consensus 67 l~~~a~~ir~ai~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~ 125 (195)
+.++|+.+++.+...-+.+++ +++..+.......+ ....+.+.+|||.++|.
T Consensus 295 f~ela~~v~~~~~~~l~~~~v~~~~~~~~~~~~~~~-------~~~~~~v~~Snlg~~~~ 347 (416)
T PRK09294 295 IVDLARAIAATLRADLADGVIQQSFLHFGTAFEGTP-------PGLPPVVFITNLGVAPP 347 (416)
T ss_pred HHHHHHHHHHHHhhhhhcceeeehhhcccccccCCC-------CCCCCeEEEecCCcCCC
Confidence 999999999998743324553 22222201000000 01234688999999953
No 7
>PF08756 YfkB: YfkB-like domain; InterPro: IPR014866 YfkB is adjacent to YfkA in Bacillus subtilis. In other bacterial species, it is fused to this protein. As YfkA contains a Radical SAM domain it suggests this domain is interacts with them.
Probab=51.21 E-value=25 Score=25.66 Aligned_cols=41 Identities=17% Similarity=0.349 Sum_probs=29.6
Q ss_pred CcchhHHHHHHHHHHHHHhcc-----CCCCcccccc--ccccccccccc
Q 035783 14 KRTKVEAFSAYIWKIMVTSID-----EKHGKCKMGC--YIGNVLSLAVG 55 (195)
Q Consensus 14 ~~S~~d~l~A~iW~~~~rAr~-----~~~~~~R~~~--y~GN~~~~~~~ 55 (195)
+||..+-=.+++ +.+-.+.. ++++|+|+.+ |-||+++.-+.
T Consensus 44 ~Cs~~eeD~~Ll-~RL~~~~NVTvRNDPDGRsRLNvNiFtGdviVTDFg 91 (153)
T PF08756_consen 44 PCSDDEEDLALL-KRLRSEPNVTVRNDPDGRSRLNVNIFTGDVIVTDFG 91 (153)
T ss_pred cCCCCHHHHHHH-HHHHhCCCCeeecCCCccceeeeeEecCCEEEecCC
Confidence 588888888877 44434432 6788999887 99999876554
No 8
>PF12345 DUF3641: Protein of unknown function (DUF3641) ; InterPro: IPR024521 This domain is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. It is found in association with an N-terminal radical_SAM domain (Pfam:PF04055 from PFAM).
Probab=42.64 E-value=45 Score=24.13 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=34.4
Q ss_pred hcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCcCcccCC--CCccc
Q 035783 63 KQGSISEIASRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPVVELDFG--FGSPV 136 (195)
Q Consensus 63 ~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG--~G~P~ 136 (195)
.+.||.+.+..+++.=+ - ++|++ .+...-.... +...-.++.+-.+|-.. +||.||- .|-|.
T Consensus 31 tNmPI~RF~~~L~~~g~--~-~~Ym~----lL~~~fNp~~----v~~vMCR~~iSV~wdG~-lYDCDFNQ~l~lp~ 94 (134)
T PF12345_consen 31 TNMPIGRFGSFLERSGN--L-EDYME----LLVDAFNPAN----VEGVMCRSQISVDWDGY-LYDCDFNQMLGLPL 94 (134)
T ss_pred hcCcHHHHHHHHHHccC--H-HHHHH----HHHHhcCHHH----HhhcccccceeECCCCe-EeCChhHHHcCCCC
Confidence 36788777776665221 1 34443 3333211111 11234667777889887 9999998 34444
No 9
>COG1254 AcyP Acylphosphatases [Energy production and conversion]
Probab=38.55 E-value=37 Score=22.87 Aligned_cols=28 Identities=21% Similarity=0.167 Sum_probs=22.1
Q ss_pred eEEEEEecCCCCCCcEEEEEEecHHHHHhhhc
Q 035783 149 VGYINQRPSAKCDGSWTVSAILWPELATALES 180 (195)
Q Consensus 149 ~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~ 180 (195)
.|.+--+ .||+++|.+.=+++++++|.+
T Consensus 33 ~G~V~N~----~DGsVeiva~G~~~~v~~~~~ 60 (92)
T COG1254 33 TGWVKNL----DDGSVEIVAEGPDEAVEKFIE 60 (92)
T ss_pred EEEEEEC----CCCeEEEEEEcCHHHHHHHHH
Confidence 5654443 378999999999999999975
No 10
>PF08252 Leader_CPA1: arg-2/CPA1 leader peptide ; InterPro: IPR013203 In this family there are leaders peptides involved in the regulation of the glutaminase subunit (small subunit) of arginine-specific carbamoyl phosphate synthetase. In Neurospora crassa it is a small upstream ORF of 24 codons above the arg-2 locus []. In yeast it is the leader peptide of the CPA1 gene. The 5' region of CPA1 mRNA contains a 25 codon upstream open reading frame. The leader peptide, the product of the upstream open reading frame, plays an essential, negative role in the specific repression of CPA1 by arginine [].; PDB: 2XL1_A.
Probab=33.99 E-value=45 Score=16.30 Aligned_cols=17 Identities=29% Similarity=0.307 Sum_probs=11.1
Q ss_pred CcchhHHHHHHHHHHHH
Q 035783 14 KRTKVEAFSAYIWKIMV 30 (195)
Q Consensus 14 ~~S~~d~l~A~iW~~~~ 30 (195)
.++.-|-|+-||||.-.
T Consensus 7 ~~t~qDYiSDhiWk~~s 23 (24)
T PF08252_consen 7 VFTSQDYISDHIWKASS 23 (24)
T ss_dssp ----HHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhhc
Confidence 46677889999999753
No 11
>PF00976 ACTH_domain: Corticotropin ACTH domain; InterPro: IPR013531 Pro-opiomelanocortin is present in high levels in the pituitary and is processed into 3 major peptide families: adrenocorticotrophin (ACTH); alpha-, beta- and gamma-melanocyte- stimulating hormones (MSH); and beta-endorphin []. ACTH regulates the synthesis and release of glucocorticoids and, to some extent, aldosterone in the adrenal cortex. It is synthesised and released in response to corticotrophin-releasing factor at times of stress (i.e. heat, cold, infection, etc.), its release leading to increased metabolism. The action of MSH in man is poorly understood, but it may be involved in temperature regulation []. Full activity of ACTH resides in the first 20 N-terminal amino acids, the first 13 of which are identical to alpha-MSH [, ]. The function of this region is not known, though it is found near the centre of these proteins.
Probab=28.39 E-value=23 Score=19.56 Aligned_cols=8 Identities=50% Similarity=1.153 Sum_probs=6.7
Q ss_pred cCCCCccc
Q 035783 129 DFGFGSPV 136 (195)
Q Consensus 129 DFG~G~P~ 136 (195)
.|-||+|+
T Consensus 6 hfrwgkp~ 13 (39)
T PF00976_consen 6 HFRWGKPV 13 (39)
T ss_pred ceeccCCC
Confidence 58899997
No 12
>KOG1212 consensus Amidases [Translation, ribosomal structure and biogenesis; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=23.22 E-value=86 Score=28.37 Aligned_cols=21 Identities=24% Similarity=0.311 Sum_probs=17.2
Q ss_pred CCcchhHHHHHHHHHHHHHhc
Q 035783 13 KKRTKVEAFSAYIWKIMVTSI 33 (195)
Q Consensus 13 ~~~S~~d~l~A~iW~~~~rAr 33 (195)
..+|.+++|+|++||...--+
T Consensus 67 ~e~~~~~vl~Ay~~Ra~~vn~ 87 (560)
T KOG1212|consen 67 GELTSVEVLCAYCHRAIEVNQ 87 (560)
T ss_pred CcCcHHHHHHHHHHHHHHhcc
Confidence 359999999999999885443
Done!