Query 035783
Match_columns 195
No_of_seqs 155 out of 1118
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:29:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 2.4E-40 8.3E-45 283.0 15.7 176 1-180 241-434 (439)
2 2rkv_A Trichothecene 3-O-acety 100.0 2.2E-38 7.6E-43 271.4 13.9 188 1-194 241-451 (451)
3 2xr7_A Malonyltransferase; xen 100.0 4.6E-36 1.6E-40 257.3 10.2 165 1-180 250-444 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 2.5E-36 8.4E-41 259.1 7.7 167 1-180 256-444 (454)
5 2bgh_A Vinorine synthase; VS, 100.0 3.8E-35 1.3E-39 249.6 10.8 169 1-187 226-414 (421)
6 2xl1_A Arginine attenuator pep 54.5 8.6 0.00029 18.1 1.8 17 14-30 7-23 (26)
7 2nnu_B HUNK1 protein, bromodom 15.4 54 0.0018 15.7 0.8 17 165-181 4-20 (26)
8 2z30_B TK-subtilisin; thermoco 14.7 56 0.0019 19.2 0.9 23 165-187 34-56 (65)
9 3arc_K Photosystem II reaction 13.7 88 0.003 16.4 1.3 14 18-31 22-35 (37)
10 3trg_A Acylphosphatase; fatty 13.4 1.4E+02 0.0049 19.1 2.7 21 160-180 48-68 (98)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=2.4e-40 Score=282.99 Aligned_cols=176 Identities=23% Similarity=0.327 Sum_probs=147.7
Q ss_pred ChHHHHHHhhC--CCCcchhHHHHHHHHHHHHHhccC-C----------CCcccccc-----cccccccccccccchhhh
Q 035783 1 ISRLQQLASVN--GKKRTKVEAFSAYIWKIMVTSIDE-K----------HGKCKMGC-----YIGNVLSLAVGEASVTEL 62 (195)
Q Consensus 1 I~~LK~~a~~~--~~~~S~~d~l~A~iW~~~~rAr~~-~----------~~~~R~~~-----y~GN~~~~~~~~~~~~~l 62 (195)
|++||+++.+. ..++|+||+|+||+|||++|||+. + |.|.|+.+ |+||++..+.+.++++||
T Consensus 241 i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el 320 (439)
T 4g22_A 241 ISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGDL 320 (439)
T ss_dssp HHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHH
T ss_pred HHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHHH
Confidence 57899999753 468999999999999999999972 2 23555553 999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCcCcccCCCCccccccccc
Q 035783 63 KQGSISEIASRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPVVELDFGFGSPVLGAVSS 142 (195)
Q Consensus 63 ~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~v~~~~ 142 (195)
.+.+|.++|.+||+++.+++ ++|+++.++|++..++...+.........+++.+|||+||++|++|||||||+++++..
T Consensus 321 ~~~~L~~~A~~Ir~ai~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~ 399 (439)
T 4g22_A 321 EFKPVWYAASKIHDALARMD-NDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGG 399 (439)
T ss_dssp HHSCHHHHHHHHHHHHHTCS-HHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESS
T ss_pred hhCcHHHHHHHHHHHHHhhC-HHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeeccc
Confidence 99999999999999999999 99999999999876544321110001125689999999999999999999999999865
Q ss_pred cccCCceEEEEEecCCCCCCcEEEEEEecHHHHHhhhc
Q 035783 143 IIERSGVGYINQRPSAKCDGSWTVSAILWPELATALES 180 (195)
Q Consensus 143 ~~~~~~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~ 180 (195)
.. .+|.++++|+++++|+++|.|+|++++|++|++
T Consensus 400 ~~---~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 400 IA---YEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp CC---STTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred cC---CCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 33 478999999988889999999999999999987
No 2
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=2.2e-38 Score=271.37 Aligned_cols=188 Identities=19% Similarity=0.261 Sum_probs=151.1
Q ss_pred ChHHHHHHhhC----CCCcchhHHHHHHHHHHHHHhc-c--CCC----------Ccccccc---cccccccccccccchh
Q 035783 1 ISRLQQLASVN----GKKRTKVEAFSAYIWKIMVTSI-D--EKH----------GKCKMGC---YIGNVLSLAVGEASVT 60 (195)
Q Consensus 1 I~~LK~~a~~~----~~~~S~~d~l~A~iW~~~~rAr-~--~~~----------~~~R~~~---y~GN~~~~~~~~~~~~ 60 (195)
|++||+++.+. +.++|+||+|+||+|||++||| . .++ .|.|+.+ |+||++..+.+.++++
T Consensus 241 i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~lP~~y~GN~~~~~~~~~~~~ 320 (451)
T 2rkv_A 241 MSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMGVSNNYPGLLQNMTYHNSTIG 320 (451)
T ss_dssp HHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHTCCTTCCSCCEEEEEEEEEHH
T ss_pred HHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCCCCCCCcccceeeecccCcHH
Confidence 57899999753 3579999999999999999998 3 222 2334333 9999999999998999
Q ss_pred hhhcCCHHHHHHHHHHHHhhcChHHH-HHHHHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCcCcccCC--CCcccc
Q 035783 61 ELKQGSISEIASRVHDSITKVTNEAH-FLDLIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPVVELDFG--FGSPVL 137 (195)
Q Consensus 61 ~l~~~~l~~~a~~ir~ai~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG--~G~P~~ 137 (195)
||.+.+|.++|.+||+++.+++ +++ ++++++|++..++...+..........++.+|||+||++|++||| ||||++
T Consensus 321 el~~~~L~~~a~~ir~ai~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~gwG~P~~ 399 (451)
T 2rkv_A 321 EIANESLGATASRLRSELDPAS-MRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLGLGKPET 399 (451)
T ss_dssp HHHHSCHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTTCSSCSCSE
T ss_pred HhccchHHHHHHHHHHHhcccC-chhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCccccccCCCCCCceE
Confidence 9999999999999999999998 777 999999999865443211000011245799999999999999998 899999
Q ss_pred ccccccccCCceEEEEEecCCCCCCcEEEEEEecHHHHHhhhcCCcccCCCcccccC
Q 035783 138 GAVSSIIERSGVGYINQRPSAKCDGSWTVSAILWPELATALESDFIFQPMSSADHLQ 194 (195)
Q Consensus 138 v~~~~~~~~~~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~d~~~~~~~~~~~~~ 194 (195)
++..... ..+|.++++|.. ++|+++|.|+|++++|++|++|++|... ++|+|
T Consensus 400 v~~~~~~--~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~d~ef~~~--~~~~g 451 (451)
T 2rkv_A 400 VRRPIFE--PVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKADKEWTKY--AQYVG 451 (451)
T ss_dssp EECCBCS--CCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHHCHHHHTT--CEECC
T ss_pred EEcCCcc--CCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhcCHHHHhh--heecC
Confidence 9854321 146888899864 4788999999999999999999999988 56776
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=4.6e-36 Score=257.28 Aligned_cols=165 Identities=18% Similarity=0.275 Sum_probs=136.5
Q ss_pred ChHHHHHHhhC-C--CCcchhHHHHHHHHHHHHHhccC------C----------CCcccccc-----cccccccccccc
Q 035783 1 ISRLQQLASVN-G--KKRTKVEAFSAYIWKIMVTSIDE------K----------HGKCKMGC-----YIGNVLSLAVGE 56 (195)
Q Consensus 1 I~~LK~~a~~~-~--~~~S~~d~l~A~iW~~~~rAr~~------~----------~~~~R~~~-----y~GN~~~~~~~~ 56 (195)
|++||+++.+. + .++|+||+|+||+|||++|||.. + +.|.|+.+ |+||++..+.+.
T Consensus 250 i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~ 329 (453)
T 2xr7_A 250 IGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVAR 329 (453)
T ss_dssp HHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCSCCCCEEEEE
T ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCcccccceeeeeeee
Confidence 57899999752 2 57999999999999999999852 2 23455542 999999999999
Q ss_pred cchhhhhc-CCHHHHHHHHHHHHhh--cChHH-HHHHHHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCcCcccCCC
Q 035783 57 ASVTELKQ-GSISEIASRVHDSITK--VTNEA-HFLDLIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPVVELDFGF 132 (195)
Q Consensus 57 ~~~~~l~~-~~l~~~a~~ir~ai~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~ 132 (195)
++++||.+ .+|.++|.+||+++.+ ++ ++ |+++ +|++..+.. .....+.+|||+||++|++||||
T Consensus 330 ~~~~el~~~~~l~~~a~~Ir~ai~~~~~~-~e~~~~~--~~~~~~~~~---------~~~~~~~vssw~~~~~y~~DFG~ 397 (453)
T 2xr7_A 330 TRQVDLAGKEGFTIAVELIGEAIRKRMKD-EEWILSG--SWFKEYDKV---------DAKRSLSVAGSPKLDLYAADFGW 397 (453)
T ss_dssp EEHHHHTSSSHHHHHHHHHHHHHTTSSSC-HHHHHSS--CTTSCCCCS---------CGGGEEEECSCSSCCGGGCCCSS
T ss_pred eeHHHhcCcchHHHHHHHHHHHHHhhccC-Cccchhh--HHHHHHHhh---------ccCCcEEEeccccCCccccccCC
Confidence 99999984 8999999999999999 46 66 8887 666643321 12347999999999999999999
Q ss_pred CccccccccccccCCceE--EEEEecCCCCCCcEEEEEEecHHHHHhhhc
Q 035783 133 GSPVLGAVSSIIERSGVG--YINQRPSAKCDGSWTVSAILWPELATALES 180 (195)
Q Consensus 133 G~P~~v~~~~~~~~~~~g--~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~ 180 (195)
|||+++++.... .+| .++++|+++++||++|.|+|++++|++|++
T Consensus 398 G~P~~v~~~~~~---~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~ 444 (453)
T 2xr7_A 398 GRPEKLEFVSID---NDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA 444 (453)
T ss_dssp CSCSEEEEGGGS---SCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH
T ss_pred CcceEEEeeeec---CCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH
Confidence 999999976543 367 888999988899999999999999999976
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.5e-36 Score=259.08 Aligned_cols=167 Identities=16% Similarity=0.204 Sum_probs=133.2
Q ss_pred ChHHHHHHhhC-C--CCcchhHHHHHHHHHHHHHhccC--------CCCcccccc-----cccccccccccccchhhhhc
Q 035783 1 ISRLQQLASVN-G--KKRTKVEAFSAYIWKIMVTSIDE--------KHGKCKMGC-----YIGNVLSLAVGEASVTELKQ 64 (195)
Q Consensus 1 I~~LK~~a~~~-~--~~~S~~d~l~A~iW~~~~rAr~~--------~~~~~R~~~-----y~GN~~~~~~~~~~~~~l~~ 64 (195)
|++||+++.+. + .++|+||+|+||+|||++|||.. .+.|.|+.+ |+||++..+.+.++++||.+
T Consensus 256 i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~ 335 (454)
T 2e1v_A 256 INQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSRNDKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIG 335 (454)
T ss_dssp HHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHHCCSEEEEEEEEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSH
T ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhcCCCceEEEEEecchhccCCCCCcccccceeeeEEeecchhhccc
Confidence 57899999753 2 57999999999999999999821 124556553 99999999999999999984
Q ss_pred -CCHHHHHHHHHHHHhhcChHHHH----HH-HHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCcCcccCCCCccccc
Q 035783 65 -GSISEIASRVHDSITKVTNEAHF----LD-LIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPVVELDFGFGSPVLG 138 (195)
Q Consensus 65 -~~l~~~a~~ir~ai~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~v 138 (195)
.+|.++|.+||+++.+++ ++|+ ++ +.+|++.... . ....++.+|||+||++|++|||||||+++
T Consensus 336 ~~~l~~~a~~Ir~ai~~~~-~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~vssw~~~~~y~~DFG~G~P~~v 405 (454)
T 2e1v_A 336 KEGFITAAKLIGENLHKTL-TDYKDGVLKDDMESFNDLVSE-------G--MPTTMTWVSGTPKLRFYDMDFGWGKPKKL 405 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHTTCCCC-----CHHHHH-------C--CCSEEEEEECCTTSCGGGCCSSSCSCSEE
T ss_pred cccHHHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHHHHh-------h--cCCceEEEecCCCCCcccccccCccceEE
Confidence 899999999999999996 4444 44 4445443210 0 12348999999999999999999999999
Q ss_pred cccccccCCceEEEEEecCCCCCCcEEEEEEecHHHHHhhhc
Q 035783 139 AVSSIIERSGVGYINQRPSAKCDGSWTVSAILWPELATALES 180 (195)
Q Consensus 139 ~~~~~~~~~~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~ 180 (195)
++.... .+|.++++|+++++||++|.|+|++++|++|++
T Consensus 406 ~~~~~~---~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~ 444 (454)
T 2e1v_A 406 ETVSID---HNGAISINSCKESNEDLEIGVCISATQMEDFVH 444 (454)
T ss_dssp EEGGGG---GSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH
T ss_pred EeeeeC---CCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH
Confidence 976543 368999999998899999999999999999976
No 5
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3.8e-35 Score=249.63 Aligned_cols=169 Identities=18% Similarity=0.251 Sum_probs=136.5
Q ss_pred ChHHHHHHhhC--CCCcchhHHHHHHHHHHHHHhccC---C----------CCcccccc-----cccccccccccccchh
Q 035783 1 ISRLQQLASVN--GKKRTKVEAFSAYIWKIMVTSIDE---K----------HGKCKMGC-----YIGNVLSLAVGEASVT 60 (195)
Q Consensus 1 I~~LK~~a~~~--~~~~S~~d~l~A~iW~~~~rAr~~---~----------~~~~R~~~-----y~GN~~~~~~~~~~~~ 60 (195)
|++||+++.+. ..++|+||+|+||+|||++|||.. . +.|.|+.+ |+||++..+.+.++++
T Consensus 226 i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~ 305 (421)
T 2bgh_A 226 IGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAE 305 (421)
T ss_dssp HHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTT
T ss_pred HHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEeccc
Confidence 57899998753 257999999999999999999861 1 13455543 9999999998888887
Q ss_pred hhhcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhhcCCcchhhhhcCCCCCcEEEeecCCCCcCcccCCCCccccccc
Q 035783 61 ELKQGSISEIASRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPAVLMSSGRRFPVVELDFGFGSPVLGAV 140 (195)
Q Consensus 61 ~l~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~v~~ 140 (195)
+ +.+|.++|.+||+++.+++ +++++++.++.+..... .....+.+|||+||++|++|||||||+++++
T Consensus 306 ~--~~~l~~~a~~ir~ai~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~ 373 (421)
T 2bgh_A 306 W--DKDFPDLIGPLRTSLEKTE-DDHNHELLKGMTCLYEL---------EPQELLSFTSWCRLGFYDLDFGWGKPLSACT 373 (421)
T ss_dssp C--CCCGGGGHHHHHHHTCCCS-SCHHHHHHHHHHHHHTS---------CGGGEEEEEEETTSCGGGCCSSSCCCSEEEC
T ss_pred c--cccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcc---------CCCCeEEEeccccCCCcccccCCCccCeecc
Confidence 6 7899999999999999998 88999888776542211 0124699999999999999999999999997
Q ss_pred cccccCCceEEEEEecCCCCCCcEEEEEEecHHHHHhhhcCCcccCC
Q 035783 141 SSIIERSGVGYINQRPSAKCDGSWTVSAILWPELATALESDFIFQPM 187 (195)
Q Consensus 141 ~~~~~~~~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~d~~~~~~ 187 (195)
.... .+|.++++|+++++ |++|.|+|++++|++|++ ||...
T Consensus 374 ~~~~---~~g~~~~~p~~~~~-gi~v~v~L~~~~m~~f~~--e~~~~ 414 (421)
T 2bgh_A 374 TTFP---KRNAALLMDTRSGD-GVEAWLPMAEDEMAMLPV--ELLSL 414 (421)
T ss_dssp CCCC---STTEEEEEECTTSS-SEEEEEEEEHHHHHHSCH--HHHTT
T ss_pred cccC---cCCEEEEEecCCCC-eEEEEEEcCHHHHHHHHH--HHHHh
Confidence 6543 46899999998765 599999999999999998 66544
No 6
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=54.45 E-value=8.6 Score=18.06 Aligned_cols=17 Identities=18% Similarity=0.352 Sum_probs=14.2
Q ss_pred CcchhHHHHHHHHHHHH
Q 035783 14 KRTKVEAFSAYIWKIMV 30 (195)
Q Consensus 14 ~~S~~d~l~A~iW~~~~ 30 (195)
-+++-|-|+-|+|+.+.
T Consensus 7 vftsqdylsdhlwraln 23 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALN 23 (26)
T ss_pred eeecHHHHHHHHHHHHh
Confidence 46778999999999874
No 7
>2nnu_B HUNK1 protein, bromodomain-containing protein 4; protein-peptide complex, helical peptide, three helix bundle, amphipathic helix, transcription; 1.59A {Homo sapiens}
Probab=15.42 E-value=54 Score=15.68 Aligned_cols=17 Identities=18% Similarity=0.325 Sum_probs=13.5
Q ss_pred EEEEEecHHHHHhhhcC
Q 035783 165 TVSAILWPELATALESD 181 (195)
Q Consensus 165 ev~v~L~~~~m~~l~~d 181 (195)
.+-+.++.+-|..|+++
T Consensus 4 tIDMn~QSDlMa~FEen 20 (26)
T 2nnu_B 4 TIDMNFQSDLLSIFEEN 20 (26)
T ss_pred eecchhHHHHHHHHHHH
Confidence 45567899999999874
No 8
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=14.69 E-value=56 Score=19.17 Aligned_cols=23 Identities=9% Similarity=-0.120 Sum_probs=17.5
Q ss_pred EEEEEecHHHHHhhhcCCcccCC
Q 035783 165 TVSAILWPELATALESDFIFQPM 187 (195)
Q Consensus 165 ev~v~L~~~~m~~l~~d~~~~~~ 187 (195)
-+.+.|+++.++.|+++|....+
T Consensus 34 a~~~~lp~~~~~~L~~~p~V~yV 56 (65)
T 2z30_B 34 AVVVDVPANAVGKLKKMPGVEKV 56 (65)
T ss_dssp EEEEEECGGGHHHHHTSTTEEEE
T ss_pred EEEEEeCHHHHHHHhcCCCceEE
Confidence 35667789999999999875443
No 9
>3arc_K Photosystem II reaction center protein K; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1izl_K* 1s5l_K* 2axt_K* 3bz1_K* 3bz2_K* 3kzi_K* 3prq_K* 3prr_K* 3a0b_K* 3a0h_K*
Probab=13.66 E-value=88 Score=16.41 Aligned_cols=14 Identities=21% Similarity=0.463 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHHHH
Q 035783 18 VEAFSAYIWKIMVT 31 (195)
Q Consensus 18 ~d~l~A~iW~~~~r 31 (195)
+=-|.|++|++...
T Consensus 22 ~f~lLafvWQAav~ 35 (37)
T 3arc_K 22 LFLALAFVWQAAVG 35 (37)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhc
Confidence 44588999998654
No 10
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=13.44 E-value=1.4e+02 Score=19.09 Aligned_cols=21 Identities=14% Similarity=0.001 Sum_probs=17.9
Q ss_pred CCCcEEEEEEecHHHHHhhhc
Q 035783 160 CDGSWTVSAILWPELATALES 180 (195)
Q Consensus 160 ~~G~~ev~v~L~~~~m~~l~~ 180 (195)
.||.+++.+.=+++.++.|.+
T Consensus 48 ~dG~Vei~~eG~~~~l~~f~~ 68 (98)
T 3trg_A 48 SHGDVELVACGERDSIMILTE 68 (98)
T ss_dssp TTSCEEEEEEEEHHHHHHHHH
T ss_pred CCCEEEEEEEECHHHHHHHHH
Confidence 367899999999999998865
Done!