Query 035783
Match_columns 195
No_of_seqs 155 out of 1118
Neff 8.8
Searched_HMMs 13730
Date Mon Mar 25 10:29:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035783.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035783hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q9ja2 c.43.1.2 (A:181-418) P 58.1 15 0.0011 25.4 6.7 74 3-80 45-133 (238)
2 d1scjb_ d.58.3.2 (B:) Subtilis 17.1 46 0.0034 18.5 2.6 21 166-186 41-61 (71)
3 d2axtk1 f.23.36.1 (K:10-46) Ph 12.0 50 0.0036 16.0 1.3 14 18-31 22-35 (37)
4 d1mg7a1 d.14.1.6 (A:14-187) Ea 11.9 59 0.0043 21.3 2.2 17 13-30 116-132 (174)
5 d1apsa_ d.58.10.1 (A:) Acylpho 11.7 78 0.0057 18.6 2.7 22 160-181 43-64 (98)
6 d1y7ta2 d.162.1.1 (A:154-332) 11.2 18 0.0013 23.9 -0.7 28 153-180 126-155 (173)
7 d1b4ra_ b.1.3.1 (A:) Polycyste 11.2 49 0.0036 19.0 1.4 24 115-138 18-41 (80)
8 d1ulra_ d.58.10.1 (A:) Acylpho 10.7 99 0.0072 17.8 2.8 21 161-181 38-58 (87)
9 d2acya_ d.58.10.1 (A:) Acylpho 10.1 1E+02 0.0073 18.1 2.7 29 148-180 35-63 (98)
10 d2crna1 a.5.2.1 (A:8-58) Suppr 9.7 82 0.006 16.3 1.9 43 59-104 6-48 (51)
No 1
>d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=58.13 E-value=15 Score=25.41 Aligned_cols=74 Identities=15% Similarity=0.073 Sum_probs=44.2
Q ss_pred HHHHHHhhCCCCcchhHHHHHHHHHHHHHhccCCC--------Cccccc--c-----cccccccccccccchhhhhcCCH
Q 035783 3 RLQQLASVNGKKRTKVEAFSAYIWKIMVTSIDEKH--------GKCKMG--C-----YIGNVLSLAVGEASVTELKQGSI 67 (195)
Q Consensus 3 ~LK~~a~~~~~~~S~~d~l~A~iW~~~~rAr~~~~--------~~~R~~--~-----y~GN~~~~~~~~~~~~~l~~~~l 67 (195)
+|++.|.+ ..+|.+.++.|-+-..+.+-.+..+ .+.|.. + .+||.+-........+. +.++
T Consensus 45 ~l~~~~~~--~~~T~~~~l~aa~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~G~~~~~~~~r~~~~~--~~~~ 120 (238)
T d1q9ja2 45 DLMAFGRE--HRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGP--NTDI 120 (238)
T ss_dssp HHHHHHTT--TTCCHHHHHHHHHHHHHHHHHTCSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCCS--SCCH
T ss_pred HHHHHHHh--cCCcHHHHHHHHHHHHHHHHhCCCCccccccccccccccccCccccceeEeeeeeEEEEEecCC--CCCH
Confidence 56665543 5688899888876666655444322 122322 1 56776554444433332 4678
Q ss_pred HHHHHHHHHHHhh
Q 035783 68 SEIASRVHDSITK 80 (195)
Q Consensus 68 ~~~a~~ir~ai~~ 80 (195)
.++++.+++.+..
T Consensus 121 ~~l~~~v~~~l~~ 133 (238)
T d1q9ja2 121 VDLASDIVATLRA 133 (238)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888754
No 2
>d1scjb_ d.58.3.2 (B:) Subtilisin prosegment {Bacillus subtilis [TaxId: 1423]}
Probab=17.12 E-value=46 Score=18.53 Aligned_cols=21 Identities=19% Similarity=0.045 Sum_probs=16.7
Q ss_pred EEEEecHHHHHhhhcCCcccC
Q 035783 166 VSAILWPELATALESDFIFQP 186 (195)
Q Consensus 166 v~v~L~~~~m~~l~~d~~~~~ 186 (195)
..+.|++++++.|.+||.-..
T Consensus 41 fs~~l~~~~~~~L~~~p~V~y 61 (71)
T d1scjb_ 41 AAATLDEKAVKELKKDPSVAY 61 (71)
T ss_dssp EEEEECHHHHHHHHTSTTEEE
T ss_pred EEEEeCHHHHHHHHcCCCceE
Confidence 445779999999999997543
No 3
>d2axtk1 f.23.36.1 (K:10-46) Photosystem II reaction center protein K, PsbK {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=12.03 E-value=50 Score=15.96 Aligned_cols=14 Identities=21% Similarity=0.463 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHHHH
Q 035783 18 VEAFSAYIWKIMVT 31 (195)
Q Consensus 18 ~d~l~A~iW~~~~r 31 (195)
+=-+.|++|++.+.
T Consensus 22 ~f~lLafVWQAaV~ 35 (37)
T d2axtk1 22 LFLALAFVWQAAVG 35 (37)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 44588999998653
No 4
>d1mg7a1 d.14.1.6 (A:14-187) Early switch protein XOL-1, N-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=11.91 E-value=59 Score=21.31 Aligned_cols=17 Identities=29% Similarity=0.559 Sum_probs=13.5
Q ss_pred CCcchhHHHHHHHHHHHH
Q 035783 13 KKRTKVEAFSAYIWKIMV 30 (195)
Q Consensus 13 ~~~S~~d~l~A~iW~~~~ 30 (195)
.+++.|.+|.| ||||+.
T Consensus 116 grIA~~siLaA-IWKsL~ 132 (174)
T d1mg7a1 116 GKLAVIPMLIA-LWKCML 132 (174)
T ss_dssp SCBCHHHHHHH-HHHHHH
T ss_pred CccchHHHHHH-HHHHhh
Confidence 47888888777 899993
No 5
>d1apsa_ d.58.10.1 (A:) Acylphosphatase {Horse (Equus caballus) [TaxId: 9796]}
Probab=11.70 E-value=78 Score=18.56 Aligned_cols=22 Identities=18% Similarity=-0.028 Sum_probs=18.8
Q ss_pred CCCcEEEEEEecHHHHHhhhcC
Q 035783 160 CDGSWTVSAILWPELATALESD 181 (195)
Q Consensus 160 ~~G~~ev~v~L~~~~m~~l~~d 181 (195)
.||.+++.+.=+++.++.|.+.
T Consensus 43 ~dG~Vei~~qG~~~~i~~f~~~ 64 (98)
T d1apsa_ 43 SKGTVTGQVQGPEEKVNSMKSW 64 (98)
T ss_dssp TTCEEEEEEEEEHHHHHHHHHS
T ss_pred CCCCEEEEEEcCHHHHHHHHHH
Confidence 3788999999999999999764
No 6
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=11.25 E-value=18 Score=23.92 Aligned_cols=28 Identities=18% Similarity=0.139 Sum_probs=17.9
Q ss_pred EEecCCCCCCcEEEE--EEecHHHHHhhhc
Q 035783 153 NQRPSAKCDGSWTVS--AILWPELATALES 180 (195)
Q Consensus 153 ~i~p~~~~~G~~ev~--v~L~~~~m~~l~~ 180 (195)
+-+|..-++|++++. +.|.+++.+.|++
T Consensus 126 ~s~Pvi~~~gg~~~v~~l~L~~~E~~~l~~ 155 (173)
T d1y7ta2 126 YSFPVTAKDGAYRVVEGLEINEFARKRMEI 155 (173)
T ss_dssp EEEEEEEETTEEEECCCCCCCHHHHHHHHH
T ss_pred EeeeEEEeCCeEEEecCCCCCHHHHHHHHH
Confidence 334443456778766 4777888888754
No 7
>d1b4ra_ b.1.3.1 (A:) Polycystein-1, PKD-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.16 E-value=49 Score=18.98 Aligned_cols=24 Identities=21% Similarity=0.295 Sum_probs=16.1
Q ss_pred EEEeecCCCCcCcccCCCCccccc
Q 035783 115 VLMSSGRRFPVVELDFGFGSPVLG 138 (195)
Q Consensus 115 ~~~ssw~~~~~y~~DFG~G~P~~v 138 (195)
|..++-....-|.-|||-|.|...
T Consensus 18 F~~~~s~~~~~y~WdFGDG~~~~~ 41 (80)
T d1b4ra_ 18 FHIAAPLPVTATRWDFGDGSAEVD 41 (80)
T ss_dssp EEEESCSSCSEEEEECCSSCCEEE
T ss_pred EEecCCCCccEEEEEeCCCCccce
Confidence 444455555678899999977543
No 8
>d1ulra_ d.58.10.1 (A:) Acylphosphatase {Thermus thermophilus [TaxId: 274]}
Probab=10.71 E-value=99 Score=17.79 Aligned_cols=21 Identities=24% Similarity=-0.001 Sum_probs=18.0
Q ss_pred CCcEEEEEEecHHHHHhhhcC
Q 035783 161 DGSWTVSAILWPELATALESD 181 (195)
Q Consensus 161 ~G~~ev~v~L~~~~m~~l~~d 181 (195)
||.+|+.+.=+++.++.|.+.
T Consensus 38 dG~Vei~~~G~~~~v~~f~~~ 58 (87)
T d1ulra_ 38 DGRVEVVAEGPKEALELFLHH 58 (87)
T ss_dssp TSCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHHHHHH
Confidence 688999999999999988753
No 9
>d2acya_ d.58.10.1 (A:) Acylphosphatase {Cow (Bos taurus) [TaxId: 9913]}
Probab=10.08 E-value=1e+02 Score=18.11 Aligned_cols=29 Identities=10% Similarity=0.046 Sum_probs=21.8
Q ss_pred ceEEEEEecCCCCCCcEEEEEEecHHHHHhhhc
Q 035783 148 GVGYINQRPSAKCDGSWTVSAILWPELATALES 180 (195)
Q Consensus 148 ~~g~v~i~p~~~~~G~~ev~v~L~~~~m~~l~~ 180 (195)
..|.|.=+ .||.+++.+.=+++.++.|.+
T Consensus 35 L~G~V~N~----~dG~Vei~~qG~~~~i~~f~~ 63 (98)
T d2acya_ 35 LVGWVQNT----DQGTVQGQLQGPASKVRHMQE 63 (98)
T ss_dssp CEEEEEEC----TTSCEEEEEEEEHHHHHHHHH
T ss_pred CEEEEEEC----CCCeEEEEEEECHHHHHHHHH
Confidence 35664332 367899999999999998865
No 10
>d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.69 E-value=82 Score=16.30 Aligned_cols=43 Identities=9% Similarity=0.125 Sum_probs=0.0
Q ss_pred hhhhhcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhhcCCcchh
Q 035783 59 VTELKQGSISEIASRVHDSITKVTNEAHFLDLIDWIECHRPGLMLA 104 (195)
Q Consensus 59 ~~~l~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (195)
+.+|.+.++++-..+ +++.... ..-++..++|+-.+.+.+.+.
T Consensus 6 v~~L~~MGF~~~~a~--~Al~~t~-n~~ve~A~~Wl~~h~~d~d~d 48 (51)
T d2crna1 6 LEPLLAMGFPVHTAL--KALAATG-RKTAEEALAWLHDHCNDPSLD 48 (51)
T ss_dssp HHHHHHTSCCHHHHH--HHHHHHT-SCCHHHHHHHHHHHSSSTTSC
T ss_pred HHHHHHcCCCHHHHH--HHHHHHC-CCCHHHHHHHHHHcCCCcCcC
Done!