Query 035786
Match_columns 693
No_of_seqs 820 out of 5812
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 10:33:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035786.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035786hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 8.9E-47 3.1E-51 445.0 21.6 348 22-378 9-388 (768)
2 4eco_A Uncharacterized protein 100.0 2E-44 6.7E-49 415.9 23.3 352 23-392 28-528 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 9.9E-44 3.4E-48 418.1 25.6 354 20-392 264-768 (876)
4 1ogq_A PGIP-2, polygalacturona 100.0 4.7E-43 1.6E-47 369.1 21.4 289 21-347 2-302 (313)
5 3rgz_A Protein brassinosteroid 100.0 1.4E-40 4.7E-45 392.3 22.3 304 89-395 339-722 (768)
6 3v47_A TOLL-like receptor 5B a 100.0 1.3E-36 4.4E-41 336.6 22.6 331 53-392 9-410 (455)
7 4aoj_A High affinity nerve gro 100.0 8.4E-37 2.9E-41 321.8 13.2 172 513-688 42-228 (329)
8 4gt4_A Tyrosine-protein kinase 100.0 8.8E-37 3E-41 318.6 13.2 170 515-688 29-215 (308)
9 4asz_A BDNF/NT-3 growth factor 100.0 6.6E-37 2.2E-41 318.2 11.1 172 513-688 14-198 (299)
10 3omv_A RAF proto-oncogene seri 100.0 1.5E-36 5.2E-41 315.7 13.8 163 512-688 36-202 (307)
11 3hmm_A TGF-beta receptor type- 100.0 1.6E-36 5.5E-41 317.0 12.7 165 514-688 5-180 (303)
12 4eco_A Uncharacterized protein 100.0 7E-35 2.4E-39 336.1 21.9 266 91-365 247-543 (636)
13 3v47_A TOLL-like receptor 5B a 100.0 2.7E-34 9.1E-39 318.0 23.7 300 93-394 30-388 (455)
14 1ogq_A PGIP-2, polygalacturona 100.0 8.6E-35 2.9E-39 306.0 16.4 251 118-372 50-306 (313)
15 4fih_A Serine/threonine-protei 100.0 8.6E-35 2.9E-39 306.4 14.4 163 512-688 74-238 (346)
16 2id5_A Lingo-1, leucine rich r 100.0 1.5E-33 5.1E-38 314.2 24.9 277 94-373 33-311 (477)
17 4fcg_A Uncharacterized protein 100.0 1.5E-34 5E-39 306.2 15.7 278 19-324 21-314 (328)
18 3vq2_A TLR4, TOLL-like recepto 100.0 4.3E-33 1.5E-37 319.8 28.5 318 63-392 33-512 (606)
19 4b9d_A Serine/threonine-protei 100.0 6.3E-35 2.1E-39 307.9 11.3 166 512-688 24-193 (350)
20 4ecn_A Leucine-rich repeat pro 100.0 1.7E-33 5.7E-38 331.3 23.9 311 62-389 448-818 (876)
21 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-33 4.1E-38 320.4 21.7 326 51-394 4-490 (549)
22 4ase_A Vascular endothelial gr 100.0 8.3E-35 2.8E-39 309.1 10.8 184 502-688 54-255 (353)
23 3fpq_A Serine/threonine-protei 100.0 2.4E-34 8.2E-39 296.9 13.5 161 516-688 30-198 (290)
24 3t6q_A CD180 antigen; protein- 100.0 1.5E-32 5.3E-37 315.2 29.5 321 63-393 34-416 (606)
25 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.7E-34 9.1E-39 298.2 13.3 165 512-688 32-202 (311)
26 2z7x_B TOLL-like receptor 1, v 100.0 7.5E-33 2.6E-37 311.9 25.7 290 88-390 40-434 (520)
27 4fie_A Serine/threonine-protei 100.0 5.4E-34 1.8E-38 307.7 15.4 163 512-688 151-315 (423)
28 2id5_A Lingo-1, leucine rich r 100.0 7.1E-33 2.4E-37 308.7 24.1 312 53-374 12-336 (477)
29 3j0a_A TOLL-like receptor 5; m 100.0 1.9E-32 6.5E-37 326.1 27.4 305 88-394 68-543 (844)
30 3t6q_A CD180 antigen; protein- 100.0 5.5E-32 1.9E-36 310.6 29.3 319 63-391 58-463 (606)
31 2z7x_B TOLL-like receptor 1, v 100.0 2E-32 6.7E-37 308.4 24.9 290 87-391 63-482 (520)
32 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.3E-32 1.1E-36 309.7 26.8 138 93-237 52-194 (562)
33 4g31_A Eukaryotic translation 100.0 9.1E-34 3.1E-38 294.9 12.4 168 513-688 6-198 (299)
34 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.2E-32 1.5E-36 308.8 26.1 310 62-391 52-511 (562)
35 4g3f_A NF-kappa-beta-inducing 100.0 1.6E-33 5.4E-38 295.9 12.6 161 512-688 58-224 (336)
36 3hyh_A Carbon catabolite-derep 100.0 3.4E-33 1.2E-37 285.9 13.8 162 512-688 13-179 (275)
37 3j0a_A TOLL-like receptor 5; m 100.0 1.1E-31 3.7E-36 319.6 28.2 310 53-372 15-376 (844)
38 3oja_B Anopheles plasmodium-re 100.0 6.1E-32 2.1E-36 309.5 25.0 284 89-390 71-358 (597)
39 3ubd_A Ribosomal protein S6 ki 100.0 7.8E-34 2.7E-38 294.6 7.6 163 513-688 25-194 (304)
40 3o6n_A APL1; leucine-rich repe 100.0 1.4E-31 4.7E-36 290.4 24.9 284 90-390 66-352 (390)
41 1ziw_A TOLL-like receptor 3; i 100.0 3.1E-31 1.1E-35 308.6 29.4 302 62-372 25-367 (680)
42 2z63_A TOLL-like receptor 4, v 100.0 2.1E-31 7.2E-36 303.2 27.2 156 235-393 344-510 (570)
43 3vq2_A TLR4, TOLL-like recepto 100.0 4.7E-31 1.6E-35 302.8 27.8 297 93-393 32-489 (606)
44 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-31 4E-36 304.0 19.2 206 58-276 3-210 (549)
45 1xku_A Decorin; proteoglycan, 100.0 5.2E-30 1.8E-34 271.4 25.4 267 93-369 52-330 (330)
46 2ft3_A Biglycan; proteoglycan, 100.0 2.5E-30 8.4E-35 274.2 22.6 266 93-369 54-331 (332)
47 2z63_A TOLL-like receptor 4, v 100.0 4.2E-30 1.4E-34 292.4 25.5 320 62-393 28-486 (570)
48 1ziw_A TOLL-like receptor 3; i 100.0 4.3E-30 1.5E-34 298.9 26.0 296 93-391 25-367 (680)
49 4g8a_A TOLL-like receptor 4; l 100.0 9E-30 3.1E-34 293.0 28.1 318 63-390 53-580 (635)
50 4b99_A Mitogen-activated prote 100.0 2.4E-31 8.1E-36 287.3 12.7 165 512-688 54-230 (398)
51 2z80_A TOLL-like receptor 2, v 100.0 8.4E-31 2.9E-35 280.3 15.8 259 93-353 52-318 (353)
52 3bz5_A Internalin-J, INLJ; leu 100.0 2.7E-29 9.4E-34 277.6 27.6 292 62-391 42-353 (457)
53 3bz5_A Internalin-J, INLJ; leu 100.0 1.6E-29 5.6E-34 279.4 25.7 277 88-392 37-333 (457)
54 2ft3_A Biglycan; proteoglycan, 100.0 2.5E-29 8.6E-34 266.5 24.5 264 94-371 34-307 (332)
55 2z66_A Variable lymphocyte rec 100.0 3.3E-30 1.1E-34 269.9 16.7 257 119-378 29-294 (306)
56 2z66_A Variable lymphocyte rec 100.0 4.4E-30 1.5E-34 269.0 17.1 259 93-354 28-292 (306)
57 1xku_A Decorin; proteoglycan, 100.0 5.8E-29 2E-33 263.4 25.4 265 94-371 32-306 (330)
58 1o6v_A Internalin A; bacterial 100.0 7.7E-29 2.6E-33 275.3 27.2 260 89-372 86-345 (466)
59 3oja_B Anopheles plasmodium-re 100.0 1.2E-29 4E-34 290.6 21.2 270 87-375 93-362 (597)
60 1o6v_A Internalin A; bacterial 100.0 7.9E-29 2.7E-33 275.2 26.6 298 62-392 46-346 (466)
61 4fmz_A Internalin; leucine ric 100.0 1.5E-28 5.1E-33 261.9 26.8 297 62-389 44-345 (347)
62 4fcg_A Uncharacterized protein 100.0 2.2E-29 7.6E-34 266.4 20.1 226 116-348 79-313 (328)
63 4f9c_A Cell division cycle 7-r 100.0 4.3E-30 1.5E-34 274.5 13.3 146 509-670 18-169 (361)
64 1wwl_A Monocyte differentiatio 100.0 1E-30 3.6E-35 274.7 7.4 250 89-350 39-310 (312)
65 3v5w_A G-protein coupled recep 100.0 1.1E-29 3.7E-34 286.3 14.9 162 512-688 189-358 (689)
66 2z80_A TOLL-like receptor 2, v 100.0 1.7E-29 5.9E-34 270.1 15.6 262 108-375 45-318 (353)
67 4fmz_A Internalin; leucine ric 100.0 3.4E-28 1.2E-32 259.1 25.5 281 62-371 66-346 (347)
68 3uim_A Brassinosteroid insensi 100.0 2.6E-29 9E-34 265.3 15.1 184 500-688 18-203 (326)
69 1wwl_A Monocyte differentiatio 100.0 7.5E-31 2.6E-35 275.8 2.3 248 116-372 41-310 (312)
70 1ozn_A Reticulon 4 receptor; N 100.0 5.3E-29 1.8E-33 258.0 15.6 209 117-326 31-240 (285)
71 3o6n_A APL1; leucine-rich repe 100.0 2E-28 6.7E-33 265.5 20.8 324 42-392 4-333 (390)
72 1ozn_A Reticulon 4 receptor; N 100.0 1.6E-28 5.4E-33 254.4 18.4 254 121-379 14-269 (285)
73 3zyi_A Leucine-rich repeat-con 100.0 6.3E-28 2.2E-32 266.8 23.8 232 118-353 75-307 (452)
74 1jl5_A Outer protein YOPM; leu 100.0 1.6E-27 5.5E-32 263.2 27.0 259 93-391 111-371 (454)
75 3uto_A Twitchin; kinase, muscl 100.0 4.3E-29 1.5E-33 282.7 14.3 164 512-688 157-324 (573)
76 4g8a_A TOLL-like receptor 4; l 100.0 2.1E-27 7.3E-32 273.1 27.8 141 93-234 52-193 (635)
77 3zyj_A Leucine-rich repeat-con 100.0 1.5E-27 5E-32 263.0 24.8 232 118-353 64-296 (440)
78 1jl5_A Outer protein YOPM; leu 100.0 2.2E-27 7.7E-32 262.1 25.7 260 93-391 131-410 (454)
79 2qkw_B Protein kinase; three-h 100.0 1.9E-28 6.5E-33 258.3 14.0 179 502-688 29-209 (321)
80 4aw2_A Serine/threonine-protei 100.0 1.4E-28 4.7E-33 269.8 13.3 174 504-688 66-244 (437)
81 3zyi_A Leucine-rich repeat-con 100.0 2E-27 6.8E-32 262.8 22.5 230 93-326 75-305 (452)
82 2c30_A Serine/threonine-protei 100.0 7.3E-28 2.5E-32 254.0 17.0 175 500-688 23-209 (321)
83 3zyj_A Leucine-rich repeat-con 100.0 7E-27 2.4E-31 257.5 25.5 247 120-373 45-294 (440)
84 3v8s_A RHO-associated protein 99.9 3.9E-28 1.3E-32 264.1 12.1 170 506-688 63-237 (410)
85 2vd5_A DMPK protein; serine/th 99.9 3.7E-28 1.2E-32 264.5 11.5 174 504-688 53-231 (412)
86 3fe3_A MAP/microtubule affinit 99.9 1.3E-27 4.4E-32 252.8 14.7 164 511-688 14-181 (328)
87 3s95_A LIMK-1, LIM domain kina 99.9 2.1E-27 7.2E-32 248.9 15.5 165 513-688 11-190 (310)
88 2nru_A Interleukin-1 receptor- 99.9 4.7E-27 1.6E-31 245.8 18.0 179 500-688 13-203 (307)
89 3zgw_A Maternal embryonic leuc 99.9 1.4E-27 4.8E-32 254.2 13.4 166 511-688 9-177 (347)
90 3soc_A Activin receptor type-2 99.9 8.1E-28 2.8E-32 253.7 11.3 167 512-688 24-201 (322)
91 3fxz_A Serine/threonine-protei 99.9 5E-27 1.7E-31 244.8 16.4 163 512-688 20-184 (297)
92 3qd2_B Eukaryotic translation 99.9 3.4E-27 1.2E-31 249.2 15.1 169 512-688 6-244 (332)
93 1qcf_A Haematopoetic cell kina 99.9 1.2E-27 4.1E-32 264.6 11.1 149 511-670 187-335 (454)
94 4hcu_A Tyrosine-protein kinase 99.9 2.1E-27 7.1E-32 243.6 11.9 147 513-670 11-157 (269)
95 3o53_A Protein LRIM1, AGAP0063 99.9 1.8E-28 6.3E-33 258.1 3.6 265 95-376 12-281 (317)
96 1o6l_A RAC-beta serine/threoni 99.9 5.1E-27 1.8E-31 249.0 14.6 164 512-688 5-173 (337)
97 1opk_A P150, C-ABL, proto-onco 99.9 2.3E-27 7.7E-32 265.2 12.3 150 512-671 220-370 (495)
98 3sxs_A Cytoplasmic tyrosine-pr 99.9 5.1E-27 1.7E-31 240.5 13.7 166 512-688 8-173 (268)
99 2o6q_A Variable lymphocyte rec 99.9 5.5E-26 1.9E-30 233.5 21.4 213 51-299 4-217 (270)
100 1tki_A Titin; serine kinase, m 99.9 1.1E-26 3.7E-31 245.0 16.3 164 512-688 5-171 (321)
101 3e7e_A HBUB1, BUB1A, mitotic c 99.9 3.3E-27 1.1E-31 253.5 12.4 169 511-688 64-253 (365)
102 3kul_A Ephrin type-A receptor 99.9 9.1E-27 3.1E-31 246.1 15.4 148 513-671 50-203 (325)
103 2qol_A Ephrin receptor; recept 99.9 3.4E-27 1.2E-31 254.2 12.3 149 512-671 45-199 (373)
104 3g06_A SSPH2 (leucine-rich rep 99.9 5.8E-26 2E-30 258.8 23.0 283 42-379 13-305 (622)
105 3txo_A PKC-L, NPKC-ETA, protei 99.9 5.7E-27 2E-31 250.3 13.5 165 511-688 22-192 (353)
106 2psq_A Fibroblast growth facto 99.9 5.7E-27 1.9E-31 252.2 13.3 155 512-670 81-254 (370)
107 3tki_A Serine/threonine-protei 99.9 6.5E-27 2.2E-31 247.0 13.2 165 512-688 7-175 (323)
108 3oja_A Leucine-rich immune mol 99.9 2E-27 6.7E-32 265.0 9.6 217 117-349 33-250 (487)
109 2z62_A TOLL-like receptor 4, v 99.9 7.2E-26 2.4E-30 233.3 20.6 206 118-325 28-238 (276)
110 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 3E-27 1E-31 261.2 11.0 149 512-671 184-332 (452)
111 4eqm_A Protein kinase; transfe 99.9 6.6E-27 2.3E-31 243.4 12.9 165 512-688 11-180 (294)
112 4dc2_A Protein kinase C IOTA t 99.9 6.9E-27 2.4E-31 252.9 13.5 164 512-688 52-221 (396)
113 1xjd_A Protein kinase C, theta 99.9 8.8E-27 3E-31 247.9 14.0 166 510-688 15-186 (345)
114 3vhe_A Vascular endothelial gr 99.9 2.7E-27 9.3E-32 253.3 10.0 184 502-688 12-263 (359)
115 4fr4_A YANK1, serine/threonine 99.9 8.8E-27 3E-31 251.2 14.0 162 513-688 16-182 (384)
116 3gen_A Tyrosine-protein kinase 99.9 6.2E-27 2.1E-31 241.8 12.3 148 512-670 24-171 (283)
117 2zv2_A Calcium/calmodulin-depe 99.9 1.4E-26 4.9E-31 241.2 14.7 164 512-688 13-205 (298)
118 3a8x_A Protein kinase C IOTA t 99.9 1.4E-26 4.8E-31 246.6 14.9 164 512-688 9-178 (345)
119 3q4u_A Activin receptor type-1 99.9 1.1E-26 3.8E-31 242.0 13.2 165 512-688 8-185 (301)
120 1fot_A TPK1 delta, CAMP-depend 99.9 1.6E-26 5.4E-31 243.3 14.3 161 512-688 6-171 (318)
121 1k9a_A Carboxyl-terminal SRC k 99.9 1.4E-26 4.7E-31 255.8 14.4 148 512-670 193-340 (450)
122 2yab_A Death-associated protei 99.9 2.4E-26 8.2E-31 246.1 15.8 163 512-688 12-186 (361)
123 3p86_A Serine/threonine-protei 99.9 1.4E-26 4.8E-31 242.8 13.5 169 511-688 36-207 (309)
124 2acx_A G protein-coupled recep 99.9 2E-26 6.9E-31 259.0 15.2 165 512-688 184-353 (576)
125 3cbl_A C-FES, proto-oncogene t 99.9 6.4E-27 2.2E-31 252.5 10.4 148 512-670 114-264 (377)
126 1rdq_E PKA C-alpha, CAMP-depen 99.9 2.3E-26 8E-31 245.3 14.3 161 512-688 41-206 (350)
127 3niz_A Rhodanese family protei 99.9 1.9E-26 6.4E-31 242.0 13.3 164 512-688 21-187 (311)
128 3rp9_A Mitogen-activated prote 99.9 1.6E-26 5.3E-31 256.1 13.3 147 512-670 53-207 (458)
129 3o53_A Protein LRIM1, AGAP0063 99.9 6.6E-27 2.3E-31 246.2 9.3 245 119-378 11-258 (317)
130 3oja_A Leucine-rich immune mol 99.9 2.8E-27 9.5E-32 263.8 6.8 236 91-343 32-269 (487)
131 2h8h_A Proto-oncogene tyrosine 99.9 5.2E-27 1.8E-31 264.6 9.0 148 512-670 267-414 (535)
132 2i0e_A Protein kinase C-beta I 99.9 2.7E-26 9.2E-31 245.0 13.9 165 511-688 19-189 (353)
133 3uc3_A Serine/threonine-protei 99.9 1.9E-26 6.6E-31 247.2 12.8 163 512-688 20-185 (361)
134 4euu_A Serine/threonine-protei 99.9 3.2E-26 1.1E-30 241.0 14.3 166 513-688 10-183 (319)
135 2x4f_A Myosin light chain kina 99.9 1.9E-26 6.4E-31 248.3 12.5 161 515-688 92-256 (373)
136 3ugc_A Tyrosine-protein kinase 99.9 1E-26 3.4E-31 241.9 10.1 148 513-670 11-165 (295)
137 3p1a_A MYT1 kinase, membrane-a 99.9 2E-26 6.9E-31 241.8 12.4 163 512-688 57-224 (311)
138 1qpc_A LCK kinase; alpha beta 99.9 1.7E-26 5.9E-31 238.0 11.5 149 512-671 13-161 (279)
139 2pmi_A Negative RE, cyclin-dep 99.9 4.4E-26 1.5E-30 239.9 14.6 169 512-688 5-176 (317)
140 3l9p_A Anaplastic lymphoma kin 99.9 1.2E-26 4E-31 249.4 10.3 172 512-688 71-254 (367)
141 3a62_A Ribosomal protein S6 ki 99.9 1.8E-26 6.1E-31 244.0 11.5 164 512-688 17-189 (327)
142 2y0a_A Death-associated protei 99.9 5.9E-26 2E-30 239.9 15.4 162 513-688 12-185 (326)
143 4ejn_A RAC-alpha serine/threon 99.9 1.2E-26 4.2E-31 256.0 10.4 164 512-688 148-317 (446)
144 2bdw_A Hypothetical protein K1 99.9 4.3E-26 1.5E-30 244.5 14.2 164 511-688 28-198 (362)
145 3t9t_A Tyrosine-protein kinase 99.9 2.3E-26 7.9E-31 235.2 11.3 147 513-670 9-155 (267)
146 3n9x_A Phosphotransferase; mal 99.9 3.2E-26 1.1E-30 251.5 13.1 165 512-688 26-219 (432)
147 3c1x_A Hepatocyte growth facto 99.9 2.1E-26 7.1E-31 247.9 10.9 147 514-670 91-243 (373)
148 3o0g_A Cell division protein k 99.9 7.2E-26 2.5E-30 235.1 14.6 164 512-688 2-169 (292)
149 1ob3_A PFPK5, cell division co 99.9 3.1E-26 1.1E-30 237.5 11.8 163 513-688 3-168 (288)
150 2z62_A TOLL-like receptor 4, v 99.9 3.3E-25 1.1E-29 228.3 19.4 225 123-353 12-241 (276)
151 3h4j_B AMPK kdaid, SNF1-like p 99.9 2.8E-26 9.5E-31 243.2 11.6 162 512-688 9-175 (336)
152 3c0i_A Peripheral plasma membr 99.9 4.6E-26 1.6E-30 243.3 13.3 167 513-688 25-201 (351)
153 1luf_A Muscle-specific tyrosin 99.9 3.4E-26 1.1E-30 243.1 12.1 175 510-688 45-244 (343)
154 1vzo_A Ribosomal protein S6 ki 99.9 1.6E-26 5.5E-31 247.3 9.5 165 512-688 54-228 (355)
155 3oz6_A Mitogen-activated prote 99.9 7.6E-26 2.6E-30 245.0 14.9 166 510-688 7-198 (388)
156 3lb7_A RAF proto-oncogene seri 99.9 7.9E-26 2.7E-30 236.8 14.6 163 512-688 36-202 (307)
157 3poz_A Epidermal growth factor 99.9 2.4E-26 8.1E-31 243.0 10.5 164 513-688 16-187 (327)
158 1u5q_A Serine/threonine protei 99.9 7E-26 2.4E-30 241.5 13.9 159 513-688 55-218 (348)
159 1mp8_A Focal adhesion kinase 1 99.9 3.4E-26 1.2E-30 236.2 11.1 165 512-688 15-185 (281)
160 3kfa_A Tyrosine-protein kinase 99.9 3.3E-26 1.1E-30 236.9 11.0 168 511-688 12-180 (288)
161 2w4o_A Calcium/calmodulin-depe 99.9 5.3E-26 1.8E-30 242.6 12.9 163 511-688 52-218 (349)
162 1kob_A Twitchin; kinase, intra 99.9 1.3E-25 4.4E-30 242.7 15.9 164 512-688 51-218 (387)
163 2y94_A 5'-AMP-activated protei 99.9 5.3E-26 1.8E-30 251.7 13.1 163 512-688 16-183 (476)
164 3soa_A Calcium/calmodulin-depe 99.9 8.3E-26 2.8E-30 248.4 14.4 165 511-688 10-181 (444)
165 3c4z_A Rhodopsin kinase; Ser/T 99.9 8.4E-26 2.9E-30 253.2 14.7 168 512-688 185-357 (543)
166 3f66_A Hepatocyte growth facto 99.9 7.8E-26 2.7E-30 235.4 13.3 165 514-688 27-200 (298)
167 3tt0_A Basic fibroblast growth 99.9 8.8E-26 3E-30 244.0 14.1 173 512-688 69-261 (382)
168 2r5t_A Serine/threonine-protei 99.9 3.4E-26 1.1E-30 246.0 10.7 164 512-688 38-207 (373)
169 3mdy_A Bone morphogenetic prot 99.9 7.9E-26 2.7E-30 239.5 13.5 167 510-688 35-214 (337)
170 3i6u_A CDS1, serine/threonine- 99.9 7E-26 2.4E-30 247.8 13.2 164 510-688 133-309 (419)
171 3ork_A Serine/threonine protei 99.9 3.1E-26 1E-30 240.3 9.8 166 512-688 12-187 (311)
172 3gxj_A TGF-beta receptor type- 99.9 2.1E-26 7.2E-31 240.0 8.4 165 512-688 3-180 (303)
173 2vuw_A Serine/threonine-protei 99.9 2.3E-26 7.9E-31 244.0 8.8 157 513-688 21-245 (336)
174 3dls_A PAS domain-containing s 99.9 5.9E-26 2E-30 240.8 11.8 164 511-688 23-197 (335)
175 3g06_A SSPH2 (leucine-rich rep 99.9 3.7E-24 1.3E-28 243.9 27.3 256 93-393 40-300 (622)
176 3gni_B Strad alpha; kinase fol 99.9 1.6E-25 5.3E-30 242.6 15.2 167 512-688 25-203 (389)
177 3rfs_A Internalin B, repeat mo 99.9 1.3E-25 4.5E-30 230.9 13.6 225 119-380 20-244 (272)
178 3kn6_A Ribosomal protein S6 ki 99.9 2.2E-25 7.4E-30 235.5 15.6 157 517-688 16-177 (325)
179 3ttj_A Mitogen-activated prote 99.9 7.4E-26 2.5E-30 250.6 12.4 162 511-688 61-231 (464)
180 4e5w_A Tyrosine-protein kinase 99.9 1.3E-25 4.4E-30 234.1 13.4 165 514-688 23-197 (302)
181 3kex_A Receptor tyrosine-prote 99.9 5.9E-26 2E-30 239.8 10.8 164 513-688 14-185 (325)
182 4agu_A Cyclin-dependent kinase 99.9 1.9E-25 6.4E-30 234.0 14.4 164 512-688 3-170 (311)
183 1rjb_A FL cytokine receptor; k 99.9 1.2E-25 4.2E-30 239.0 13.2 174 511-688 44-242 (344)
184 3g33_A Cell division protein k 99.9 1.6E-25 5.6E-30 234.3 13.8 166 511-688 8-187 (308)
185 4eut_A Serine/threonine-protei 99.9 9.8E-26 3.4E-30 244.8 12.4 166 513-688 10-183 (396)
186 4glp_A Monocyte differentiatio 99.9 3.7E-25 1.3E-29 232.0 16.4 203 117-349 90-307 (310)
187 3f3z_A Calcium/calmodulin-depe 99.9 2.5E-25 8.7E-30 229.0 14.8 163 512-688 9-176 (277)
188 3pg1_A Mitogen-activated prote 99.9 1.8E-25 6E-30 239.6 14.1 173 503-688 13-201 (362)
189 2izr_A Casein kinase I isoform 99.9 1.2E-25 4.1E-30 237.9 12.5 164 512-688 9-185 (330)
190 3rfs_A Internalin B, repeat mo 99.9 5.2E-25 1.8E-29 226.4 16.6 201 117-329 40-240 (272)
191 3lxp_A Non-receptor tyrosine-p 99.9 3E-25 1E-29 233.6 15.2 163 514-688 33-205 (318)
192 4fl3_A Tyrosine-protein kinase 99.9 1E-25 3.6E-30 258.5 12.6 158 518-688 375-540 (635)
193 3kmu_A ILK, integrin-linked ki 99.9 1.6E-25 5.3E-30 229.3 12.5 149 513-669 11-163 (271)
194 3g2f_A Bone morphogenetic prot 99.9 1.3E-25 4.6E-30 237.8 12.2 165 512-688 13-196 (336)
195 2ivs_A Proto-oncogene tyrosine 99.9 1.3E-25 4.3E-30 235.4 11.9 156 512-671 23-202 (314)
196 1t46_A HOMO sapiens V-KIT hard 99.9 1.4E-25 4.7E-30 235.1 12.1 173 512-688 23-215 (313)
197 1cm8_A Phosphorylated MAP kina 99.9 1.7E-25 5.8E-30 240.3 13.1 161 511-688 24-193 (367)
198 3lxl_A Tyrosine-protein kinase 99.9 1.3E-25 4.5E-30 237.2 11.9 166 513-688 24-198 (327)
199 2o6q_A Variable lymphocyte rec 99.9 4.5E-24 1.5E-28 219.2 23.0 201 119-323 17-217 (270)
200 1zy4_A Serine/threonine-protei 99.9 1.1E-25 3.8E-30 234.2 11.1 150 511-670 5-167 (303)
201 2xir_A Vascular endothelial gr 99.9 8.8E-26 3E-30 236.9 10.3 183 503-688 18-218 (316)
202 3qup_A Tyrosine-protein kinase 99.9 1.5E-25 5.1E-30 236.2 12.0 155 511-670 22-188 (323)
203 3pfq_A PKC-B, PKC-beta, protei 99.9 1.9E-25 6.6E-30 258.1 13.7 165 511-688 340-510 (674)
204 3is5_A Calcium-dependent prote 99.9 2.5E-25 8.4E-30 230.4 13.1 166 513-688 23-194 (285)
205 2ozo_A Tyrosine-protein kinase 99.9 1.9E-25 6.6E-30 255.6 13.5 140 519-670 343-487 (613)
206 2y7j_A Phosphorylase B kinase 99.9 4.4E-25 1.5E-29 237.0 15.4 167 508-688 90-267 (365)
207 3cok_A Serine/threonine-protei 99.9 2.7E-25 9.2E-30 228.9 13.2 165 512-688 11-180 (278)
208 4fvq_A Tyrosine-protein kinase 99.9 8E-26 2.7E-30 234.1 9.2 147 513-670 9-172 (289)
209 3llt_A Serine/threonine kinase 99.9 1.4E-25 4.8E-30 240.2 11.4 165 509-688 32-227 (360)
210 2eue_A Carbon catabolite derep 99.9 3.6E-25 1.2E-29 227.7 13.9 162 512-688 13-179 (275)
211 2a2a_A Death-associated protei 99.9 4.6E-25 1.6E-29 232.4 15.0 162 513-688 13-186 (321)
212 1x8b_A WEE1HU, WEE1-like prote 99.9 4.4E-25 1.5E-29 227.9 14.5 156 511-674 10-189 (289)
213 2ac3_A MAP kinase-interacting 99.9 5.8E-25 2E-29 230.8 15.5 163 514-688 14-189 (316)
214 2pvf_A Fibroblast growth facto 99.9 2.9E-25 9.9E-30 235.3 13.2 156 512-671 35-209 (334)
215 1nxk_A MAP kinase-activated pr 99.9 1.9E-25 6.5E-30 242.8 12.0 160 514-688 63-231 (400)
216 1p4o_A Insulin-like growth fac 99.9 8E-26 2.7E-30 238.1 8.7 158 509-670 22-189 (322)
217 3dtc_A Mitogen-activated prote 99.9 2.6E-25 9E-30 228.0 12.4 163 512-688 7-182 (271)
218 2x7f_A TRAF2 and NCK-interacti 99.9 8.8E-26 3E-30 238.2 9.0 170 509-688 21-197 (326)
219 3kk8_A Calcium/calmodulin depe 99.9 6E-25 2.1E-29 226.9 15.1 163 512-688 6-175 (284)
220 4f0f_A Serine/threonine-protei 99.9 4.1E-25 1.4E-29 228.7 13.7 162 512-688 19-194 (287)
221 1b6c_B TGF-B superfamily recep 99.9 6.6E-25 2.3E-29 233.0 15.6 167 510-688 40-219 (342)
222 2h34_A Serine/threonine-protei 99.9 3.5E-25 1.2E-29 232.0 13.2 166 511-688 33-203 (309)
223 3pls_A Macrophage-stimulating 99.9 2.8E-25 9.6E-30 231.0 12.3 146 514-669 23-174 (298)
224 3og7_A AKAP9-BRAF fusion prote 99.9 2.1E-25 7E-30 231.4 11.2 163 512-688 24-190 (289)
225 3fdn_A Serine/threonine-protei 99.9 2.7E-25 9.3E-30 229.1 11.9 163 511-688 8-175 (279)
226 3dbq_A Dual specificity protei 99.9 2.2E-25 7.6E-30 237.2 11.5 162 513-688 10-177 (343)
227 2a19_B Interferon-induced, dou 99.9 2.2E-25 7.7E-30 229.9 11.2 163 512-688 11-189 (284)
228 3op5_A Serine/threonine-protei 99.9 1.5E-25 5.2E-30 240.5 10.3 167 511-688 34-229 (364)
229 2yex_A Serine/threonine-protei 99.9 4.4E-25 1.5E-29 226.8 13.4 165 512-688 7-175 (276)
230 3mtl_A Cell division protein k 99.9 1.5E-25 5.3E-30 236.5 10.1 163 513-688 3-168 (324)
231 3bhy_A Death-associated protei 99.9 5.5E-25 1.9E-29 227.1 14.0 162 513-688 6-179 (283)
232 2pml_X PFPK7, Ser/Thr protein 99.9 3.6E-25 1.2E-29 235.7 13.0 169 512-688 31-218 (348)
233 2rku_A Serine/threonine-protei 99.9 5.7E-25 1.9E-29 228.5 13.9 164 512-688 15-183 (294)
234 3cc6_A Protein tyrosine kinase 99.9 2.5E-25 8.5E-30 229.7 11.1 165 512-688 12-182 (281)
235 1p9a_G Platelet glycoprotein I 99.9 4.8E-24 1.7E-28 221.3 20.9 199 117-323 9-207 (290)
236 2owb_A Serine/threonine-protei 99.9 5.6E-25 1.9E-29 233.3 13.9 164 512-688 41-209 (335)
237 3q5i_A Protein kinase; CDPK, m 99.9 6.5E-25 2.2E-29 246.0 15.2 164 511-688 35-216 (504)
238 2zmd_A Dual specificity protei 99.9 4.3E-25 1.5E-29 239.2 13.3 162 513-688 57-224 (390)
239 3mi9_A Cell division protein k 99.9 5.5E-25 1.9E-29 234.8 13.8 166 512-688 17-196 (351)
240 1mqb_A Ephrin type-A receptor 99.9 4.8E-25 1.6E-29 233.6 13.2 146 514-670 46-198 (333)
241 2eva_A TAK1 kinase - TAB1 chim 99.9 2E-25 6.9E-30 233.7 10.0 162 513-688 9-171 (307)
242 2clq_A Mitogen-activated prote 99.9 1.1E-24 3.9E-29 226.1 15.5 165 514-688 24-191 (295)
243 3hko_A Calcium/calmodulin-depe 99.9 1.9E-25 6.5E-30 237.6 9.8 176 509-688 23-242 (345)
244 3a7i_A MST3 kinase, serine/thr 99.9 1.1E-24 3.7E-29 227.4 15.0 163 512-688 22-187 (303)
245 3brb_A Proto-oncogene tyrosine 99.9 5.8E-25 2E-29 230.6 13.0 155 511-670 33-198 (313)
246 1z7x_W Ribonuclease inhibitor; 99.9 3.1E-27 1.1E-31 261.6 -4.7 284 89-373 24-356 (461)
247 3lij_A Calcium/calmodulin depe 99.9 6.9E-25 2.4E-29 245.2 14.2 162 513-688 38-206 (494)
248 1ua2_A CAK, cell division prot 99.9 3.9E-25 1.3E-29 235.6 11.6 166 510-688 8-180 (346)
249 3eb0_A Putative uncharacterize 99.9 3.3E-25 1.1E-29 239.6 10.9 166 510-688 5-209 (383)
250 1byg_A CSK, protein (C-termina 99.9 1.8E-25 6.3E-30 230.3 8.5 149 512-671 21-169 (278)
251 1t4h_A Serine/threonine-protei 99.9 1.2E-24 4E-29 225.7 14.6 163 514-688 28-198 (290)
252 2w1i_A JAK2; chromosomal rearr 99.9 6.4E-25 2.2E-29 231.9 12.7 149 513-671 42-197 (326)
253 3lzb_A Epidermal growth factor 99.9 5.2E-25 1.8E-29 232.8 12.0 165 512-688 15-187 (327)
254 3qyz_A Mitogen-activated prote 99.9 7.3E-25 2.5E-29 235.2 13.1 164 512-688 27-199 (364)
255 3gbz_A Kinase, CMGC CDK; ssgci 99.9 3E-25 1E-29 234.7 9.9 165 510-688 32-205 (329)
256 2h6d_A 5'-AMP-activated protei 99.9 7.2E-25 2.4E-29 225.4 12.4 163 512-688 11-178 (276)
257 1u59_A Tyrosine-protein kinase 99.9 9.4E-25 3.2E-29 226.1 13.4 141 518-670 16-161 (287)
258 3nyv_A Calmodulin-domain prote 99.9 7.3E-25 2.5E-29 244.4 13.4 162 513-688 27-196 (484)
259 4aaa_A Cyclin-dependent kinase 99.9 5.9E-25 2E-29 232.6 11.9 164 512-688 25-192 (331)
260 2vwi_A Serine/threonine-protei 99.9 2E-25 7E-30 232.5 8.1 156 511-670 14-172 (303)
261 2i1m_A Macrophage colony-stimu 99.9 4E-25 1.4E-29 233.9 10.5 156 511-670 45-215 (333)
262 3mwu_A Calmodulin-domain prote 99.9 8.3E-25 2.9E-29 244.0 13.5 163 512-688 22-191 (486)
263 1phk_A Phosphorylase kinase; g 99.9 1.5E-24 5E-29 225.7 14.4 164 511-688 16-191 (298)
264 2w5a_A Serine/threonine-protei 99.9 2.6E-25 8.8E-30 229.1 8.4 156 512-671 6-168 (279)
265 3eqc_A Dual specificity mitoge 99.9 4E-25 1.4E-29 236.8 10.1 162 513-688 34-198 (360)
266 2j0j_A Focal adhesion kinase 1 99.9 6.1E-25 2.1E-29 253.1 12.3 165 512-688 390-560 (656)
267 1csn_A Casein kinase-1; phosph 99.9 2E-24 6.9E-29 224.5 14.7 164 512-688 10-186 (298)
268 1p9a_G Platelet glycoprotein I 99.9 1.4E-23 4.6E-28 217.9 20.8 207 137-352 5-211 (290)
269 2fst_X Mitogen-activated prote 99.9 5.2E-25 1.8E-29 236.5 10.4 160 512-688 29-197 (367)
270 2vgo_A Serine/threonine-protei 99.9 1.4E-24 4.6E-29 224.5 13.2 162 512-688 14-180 (284)
271 3nsz_A CK II alpha, casein kin 99.9 1.9E-24 6.3E-29 228.4 14.4 159 512-688 36-198 (330)
272 2yfx_A Tyrosine-protein kinase 99.9 8.1E-25 2.8E-29 231.1 11.6 153 512-669 30-193 (327)
273 2qr7_A Ribosomal protein S6 ki 99.9 8.8E-25 3E-29 232.4 11.8 161 512-688 22-188 (342)
274 2xrw_A Mitogen-activated prote 99.9 1.2E-24 4.3E-29 234.0 13.0 161 512-688 25-194 (371)
275 3lm5_A Serine/threonine-protei 99.9 2.5E-24 8.4E-29 227.5 15.1 163 514-688 30-201 (327)
276 4hgt_A Casein kinase I isoform 99.9 1.5E-24 5.1E-29 225.2 13.2 167 510-688 7-183 (296)
277 2wtk_C Serine/threonine-protei 99.9 3.1E-24 1E-28 224.0 15.6 168 511-688 4-179 (305)
278 3e3p_A Protein kinase, putativ 99.9 1.4E-24 4.9E-29 232.2 13.4 174 505-688 16-199 (360)
279 2r3i_A Cell division protein k 99.9 1.1E-24 3.9E-29 226.6 11.9 148 512-670 3-154 (299)
280 3byv_A Rhoptry kinase; malaria 99.9 1.9E-25 6.6E-30 240.9 6.3 155 512-671 73-258 (377)
281 2b9h_A MAP kinase FUS3, mitoge 99.9 1.6E-24 5.3E-29 231.3 13.2 164 512-688 11-190 (353)
282 2j7t_A Serine/threonine-protei 99.9 6.1E-25 2.1E-29 229.0 9.8 147 512-669 19-167 (302)
283 3com_A Serine/threonine-protei 99.9 2.7E-24 9.2E-29 225.5 14.7 165 511-688 28-193 (314)
284 2buj_A Serine/threonine-protei 99.9 6.2E-25 2.1E-29 230.7 9.7 151 512-669 29-184 (317)
285 4azs_A Methyltransferase WBDD; 99.9 7.5E-25 2.6E-29 247.9 10.9 153 520-688 242-407 (569)
286 2jii_A Serine/threonine-protei 99.9 2.6E-25 8.9E-30 237.5 6.4 163 512-688 42-236 (352)
287 2wqm_A Serine/threonine-protei 99.9 1.6E-24 5.3E-29 227.0 12.2 168 512-688 32-204 (310)
288 1xbb_A Tyrosine-protein kinase 99.9 1.9E-24 6.5E-29 224.3 12.6 145 514-671 18-169 (291)
289 2ycf_A Serine/threonine-protei 99.9 9.9E-25 3.4E-29 229.9 10.6 147 512-671 10-169 (322)
290 1j1b_A Glycogen synthase kinas 99.9 1E-24 3.5E-29 238.6 10.7 163 513-688 55-224 (420)
291 1z7x_W Ribonuclease inhibitor; 99.9 2.2E-26 7.4E-31 254.8 -2.7 302 88-391 51-412 (461)
292 1fvr_A Tyrosine-protein kinase 99.9 2E-24 6.9E-29 228.1 12.4 154 512-669 25-192 (327)
293 3uzp_A CKI-delta, CKID, casein 99.9 2.7E-24 9.3E-29 223.3 13.1 166 511-688 8-183 (296)
294 2pzi_A Probable serine/threoni 99.9 1.1E-24 3.8E-29 252.9 11.3 158 512-688 80-245 (681)
295 3kvw_A DYRK2, dual specificity 99.9 2.5E-24 8.6E-29 236.1 13.5 162 512-688 97-267 (429)
296 2i6l_A Mitogen-activated prote 99.9 1.9E-24 6.5E-29 226.9 11.6 146 512-670 11-172 (320)
297 3rgf_A Cyclin-dependent kinase 99.9 1.5E-24 5E-29 236.3 11.1 167 517-688 26-203 (405)
298 3m19_A Variable lymphocyte rec 99.9 1.3E-23 4.4E-28 213.3 17.3 158 118-275 35-192 (251)
299 3goz_A Leucine-rich repeat-con 99.9 2.1E-25 7.3E-30 239.2 4.3 254 97-351 2-299 (362)
300 2v62_A Serine/threonine-protei 99.9 9.9E-25 3.4E-29 232.4 9.4 165 512-688 37-228 (345)
301 4e7w_A Glycogen synthase kinas 99.9 1.5E-24 5E-29 235.4 10.6 163 513-688 41-209 (394)
302 3ll6_A Cyclin G-associated kin 99.9 2.4E-24 8.2E-29 227.8 11.9 152 513-671 29-190 (337)
303 1blx_A Cyclin-dependent kinase 99.9 2.4E-24 8.2E-29 227.1 11.3 167 510-688 9-187 (326)
304 2jam_A Calcium/calmodulin-depe 99.9 3.3E-24 1.1E-28 223.9 12.1 146 513-670 10-160 (304)
305 3an0_A Dual specificity mitoge 99.9 1.6E-24 5.5E-29 230.1 9.8 153 511-671 50-206 (340)
306 3fme_A Dual specificity mitoge 99.9 1.7E-24 5.9E-29 224.1 9.0 152 512-671 7-162 (290)
307 3q60_A ROP5B; pseudokinase, tr 99.9 1.2E-24 4.2E-29 234.0 8.1 160 513-688 63-259 (371)
308 2ast_B S-phase kinase-associat 99.9 1.1E-25 3.6E-30 238.6 -0.7 263 49-328 34-310 (336)
309 2xwt_C Thyrotropin receptor; s 99.9 2.1E-23 7.2E-28 210.0 16.1 197 118-321 31-236 (239)
310 2wei_A Calmodulin-domain prote 99.9 1.1E-23 3.9E-28 217.9 14.4 163 512-688 22-191 (287)
311 4glp_A Monocyte differentiatio 99.9 3E-24 1E-28 225.1 10.1 202 167-372 92-308 (310)
312 4exu_A Mitogen-activated prote 99.9 5E-24 1.7E-28 229.3 12.0 159 512-688 42-209 (371)
313 3sv0_A Casein kinase I-like; t 99.9 8.8E-24 3E-28 234.4 14.2 165 512-688 7-181 (483)
314 1u46_A ACK-1, activated CDC42 99.9 3E-24 1E-28 222.4 9.6 148 512-671 18-173 (291)
315 1z57_A Dual specificity protei 99.9 7.9E-24 2.7E-28 223.9 12.3 162 512-688 14-202 (339)
316 3coi_A Mitogen-activated prote 99.9 8.2E-24 2.8E-28 225.9 12.5 159 512-688 24-191 (353)
317 1wak_A Serine/threonine-protei 99.9 6.1E-24 2.1E-28 230.2 11.3 164 512-688 37-261 (397)
318 2ca6_A RAN GTPase-activating p 99.9 3.2E-25 1.1E-29 239.9 0.7 208 117-325 31-288 (386)
319 2y4i_B KSR2, HKSR2, kinase sup 99.9 3.8E-24 1.3E-28 224.9 8.7 164 511-688 32-202 (319)
320 2xwt_C Thyrotropin receptor; s 99.9 4.4E-23 1.5E-27 207.7 15.8 203 133-346 25-236 (239)
321 2ca6_A RAN GTPase-activating p 99.9 4.4E-25 1.5E-29 238.8 1.0 241 88-328 27-320 (386)
322 2ast_B S-phase kinase-associat 99.9 1.7E-24 5.8E-29 229.4 4.5 222 94-321 48-282 (336)
323 3cek_A Dual specificity protei 99.9 1.6E-23 5.4E-28 219.7 11.4 164 511-688 27-196 (313)
324 3goz_A Leucine-rich repeat-con 99.9 8.5E-25 2.9E-29 234.5 1.5 255 122-376 2-302 (362)
325 3a99_A Proto-oncogene serine/t 99.9 1.2E-23 4E-28 221.6 10.0 163 511-688 42-216 (320)
326 3aln_A Dual specificity mitoge 99.9 2.7E-23 9.1E-28 219.4 12.5 168 512-688 22-193 (327)
327 3uqc_A Probable conserved tran 99.9 3.4E-23 1.2E-27 214.5 13.0 142 512-667 31-177 (286)
328 2rio_A Serine/threonine-protei 99.9 1E-23 3.4E-28 231.7 9.3 166 515-688 18-200 (434)
329 2iwi_A Serine/threonine-protei 99.9 6.5E-24 2.2E-28 222.5 7.5 164 510-688 29-206 (312)
330 2vx3_A Dual specificity tyrosi 99.9 3.3E-23 1.1E-27 223.8 13.3 165 511-688 53-226 (382)
331 3p23_A Serine/threonine-protei 99.9 9.1E-24 3.1E-28 231.6 8.8 163 512-688 24-194 (432)
332 3fhr_A MAP kinase-activated pr 99.9 3.4E-23 1.2E-27 219.7 12.1 162 512-688 28-197 (336)
333 3m2w_A MAP kinase-activated pr 99.9 6.3E-23 2.1E-27 213.8 13.4 147 513-672 18-173 (299)
334 3en9_A Glycoprotease, O-sialog 99.9 1.6E-23 5.3E-28 235.8 9.3 150 516-688 340-504 (540)
335 2o6s_A Variable lymphocyte rec 99.9 2.2E-22 7.6E-27 198.0 16.3 159 117-282 27-185 (208)
336 2eu9_A Dual specificity protei 99.9 4.7E-23 1.6E-27 219.5 12.2 162 512-688 19-207 (355)
337 3m19_A Variable lymphocyte rec 99.9 5.5E-22 1.9E-26 201.3 19.5 179 119-325 15-193 (251)
338 1q8y_A SR protein kinase; tran 99.9 2.8E-23 9.4E-28 223.2 9.7 164 512-688 19-203 (373)
339 1h6u_A Internalin H; cell adhe 99.9 2.3E-22 8E-27 210.5 15.9 192 117-325 40-231 (308)
340 1h6u_A Internalin H; cell adhe 99.9 2.8E-22 9.6E-27 209.9 16.0 197 88-302 36-232 (308)
341 3qa8_A MGC80376 protein; kinas 99.9 2.2E-23 7.6E-28 236.7 7.6 167 512-688 14-191 (676)
342 2dyl_A Dual specificity mitoge 99.9 9E-23 3.1E-27 214.1 11.0 148 512-670 25-176 (318)
343 3cvr_A Invasion plasmid antige 99.9 2.5E-22 8.6E-27 226.1 13.2 158 43-256 35-197 (571)
344 4b8c_D Glucose-repressible alc 99.9 2E-22 6.7E-27 234.9 9.1 262 23-324 130-404 (727)
345 2o6s_A Variable lymphocyte rec 99.9 2.5E-21 8.5E-26 190.5 15.2 181 121-312 10-190 (208)
346 3cvr_A Invasion plasmid antige 99.9 2.8E-21 9.6E-26 217.6 17.5 182 119-329 60-248 (571)
347 4ay9_X Follicle-stimulating ho 99.9 5.3E-21 1.8E-25 203.9 18.8 228 108-344 23-254 (350)
348 1zar_A RIO2 kinase; serine kin 99.9 2.1E-21 7.1E-26 200.4 12.9 141 506-670 84-243 (282)
349 4ay9_X Follicle-stimulating ho 99.8 1.4E-20 4.7E-25 200.7 18.7 242 121-371 12-259 (350)
350 3dzo_A Rhoptry kinase domain; 99.8 1.1E-21 3.6E-26 214.2 7.0 156 512-672 78-264 (413)
351 3ogk_B Coronatine-insensitive 99.8 1E-22 3.4E-27 232.7 -4.5 281 91-373 162-503 (592)
352 3e6j_A Variable lymphocyte rec 99.8 5.1E-20 1.7E-24 184.1 15.6 137 118-255 40-176 (229)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 1.9E-19 6.4E-24 178.8 15.6 155 97-255 15-170 (220)
354 2xot_A Amphoterin-induced prot 99.8 1.2E-19 4.2E-24 194.2 15.2 174 98-275 23-202 (361)
355 3ogk_B Coronatine-insensitive 99.8 6.7E-22 2.3E-26 225.9 -4.1 281 90-373 189-528 (592)
356 1m9s_A Internalin B; cell inva 99.8 1.5E-19 5.3E-24 205.5 14.4 185 98-300 26-210 (605)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 3.4E-19 1.1E-23 177.0 14.9 154 121-277 14-168 (220)
358 2v9t_B SLIT homolog 2 protein 99.8 4.7E-19 1.6E-23 175.9 15.4 153 96-252 14-166 (220)
359 1h6t_A Internalin B; cell adhe 99.8 3.9E-19 1.3E-23 184.3 14.5 169 117-324 45-213 (291)
360 2xot_A Amphoterin-induced prot 99.8 2.1E-19 7.4E-24 192.3 12.7 176 121-324 21-202 (361)
361 1h6t_A Internalin B; cell adhe 99.8 7.8E-19 2.7E-23 182.1 15.8 174 88-276 41-214 (291)
362 2v9t_B SLIT homolog 2 protein 99.8 9.5E-19 3.3E-23 173.7 15.7 152 121-275 14-165 (220)
363 1m9s_A Internalin B; cell inva 99.8 1.2E-19 4.1E-24 206.4 10.3 174 88-276 38-211 (605)
364 1zth_A RIO1 serine protein kin 99.8 1.4E-19 4.6E-24 184.4 9.0 139 514-671 49-221 (258)
365 3e6j_A Variable lymphocyte rec 99.8 2.1E-18 7.3E-23 172.3 16.1 153 122-303 23-175 (229)
366 4ezg_A Putative uncharacterize 99.8 1.4E-18 4.6E-23 169.4 11.4 151 117-274 43-193 (197)
367 4ezg_A Putative uncharacterize 99.8 3E-18 1E-22 167.0 13.6 155 90-252 41-195 (197)
368 4b8c_D Glucose-repressible alc 99.8 9.9E-20 3.4E-24 212.1 3.5 163 148-321 207-369 (727)
369 1dce_A Protein (RAB geranylger 99.8 9.8E-21 3.3E-25 214.1 -5.7 122 191-318 442-567 (567)
370 1dce_A Protein (RAB geranylger 99.8 2E-20 6.9E-25 211.5 -3.6 176 140-328 347-550 (567)
371 1xeu_A Internalin C; cellular 99.7 3.3E-18 1.1E-22 174.7 8.3 124 117-251 40-163 (263)
372 1xeu_A Internalin C; cellular 99.7 4.9E-18 1.7E-22 173.4 9.3 169 117-301 18-186 (263)
373 1w8a_A SLIT protein; signaling 99.7 2.6E-17 8.8E-22 159.7 13.8 132 121-255 11-143 (192)
374 2ell_A Acidic leucine-rich nuc 99.7 9.5E-17 3.3E-21 151.9 12.3 133 117-251 23-160 (168)
375 2p1m_B Transport inhibitor res 99.7 3.8E-19 1.3E-23 203.0 -6.6 282 90-373 153-496 (594)
376 1w8a_A SLIT protein; signaling 99.7 1.4E-16 4.8E-21 154.4 12.5 131 145-278 11-142 (192)
377 2je0_A Acidic leucine-rich nuc 99.7 7.6E-17 2.6E-21 149.4 9.4 128 117-246 16-148 (149)
378 2ell_A Acidic leucine-rich nuc 99.7 1.5E-16 5.1E-21 150.6 10.0 133 141-275 23-160 (168)
379 2je0_A Acidic leucine-rich nuc 99.7 1.4E-16 4.9E-21 147.5 8.5 129 141-271 16-149 (149)
380 2p1m_B Transport inhibitor res 99.6 1.6E-18 5.5E-23 197.8 -6.5 205 91-297 103-324 (594)
381 2o6r_A Variable lymphocyte rec 99.6 2.8E-15 9.5E-20 143.1 14.6 132 121-255 10-141 (177)
382 2wfh_A SLIT homolog 2 protein 99.6 2.6E-15 8.8E-20 145.6 14.2 127 122-252 14-140 (193)
383 2wfh_A SLIT homolog 2 protein 99.6 3.2E-15 1.1E-19 145.0 13.8 127 145-275 13-139 (193)
384 2o6r_A Variable lymphocyte rec 99.6 3.8E-15 1.3E-19 142.2 13.0 128 144-274 9-136 (177)
385 4gyi_A RIO2 kinase; protein ki 99.6 2.7E-15 9.2E-20 159.1 9.3 135 514-668 97-264 (397)
386 1ds9_A Outer arm dynein; leuci 99.6 1.7E-17 5.9E-22 161.7 -7.5 133 118-255 18-157 (198)
387 3sb4_A Hypothetical leucine ri 99.6 4.3E-15 1.5E-19 156.7 9.6 102 237-342 225-327 (329)
388 1ds9_A Outer arm dynein; leuci 99.6 3.2E-17 1.1E-21 159.8 -6.6 155 89-251 14-185 (198)
389 3sb4_A Hypothetical leucine ri 99.5 3.9E-15 1.3E-19 157.0 7.1 261 92-364 24-327 (329)
390 1a9n_A U2A', U2A'; complex (nu 99.5 1.1E-14 3.8E-19 138.8 8.0 128 117-250 18-152 (176)
391 1a9n_A U2A', U2A'; complex (nu 99.5 2E-14 6.8E-19 137.1 9.7 133 138-275 15-153 (176)
392 3g39_A Variable lymphocyte rec 99.4 4.6E-13 1.6E-17 126.8 12.5 107 145-254 12-118 (170)
393 4fdw_A Leucine rich hypothetic 99.4 3.8E-12 1.3E-16 137.5 20.9 239 119-370 136-382 (401)
394 3g39_A Variable lymphocyte rec 99.4 4.8E-13 1.7E-17 126.7 12.2 105 121-228 12-116 (170)
395 2r9u_A Variable lymphocyte rec 99.4 9.3E-13 3.2E-17 125.2 12.1 87 166-252 33-119 (174)
396 2r9u_A Variable lymphocyte rec 99.4 1.1E-12 3.7E-17 124.8 12.5 105 121-228 15-119 (174)
397 4fdw_A Leucine rich hypothetic 99.4 9.8E-12 3.4E-16 134.3 20.7 237 118-370 113-357 (401)
398 3un9_A NLR family member X1; l 99.3 1.6E-13 5.3E-18 147.0 -2.3 135 93-227 72-224 (372)
399 3un9_A NLR family member X1; l 99.3 1.6E-13 5.6E-18 146.8 -4.2 167 117-304 71-256 (372)
400 2ifg_A High affinity nerve gro 99.2 1.6E-11 5.6E-16 130.0 11.2 78 124-203 14-93 (347)
401 2ifg_A High affinity nerve gro 99.2 1.8E-11 6.3E-16 129.6 11.2 106 145-253 11-118 (347)
402 3tm0_A Aminoglycoside 3'-phosp 99.2 8.6E-11 2.9E-15 119.2 11.6 146 508-668 10-213 (263)
403 1nd4_A Aminoglycoside 3'-phosp 99.1 1.4E-10 4.9E-15 117.0 9.0 132 519-669 27-215 (264)
404 3dxp_A Putative acyl-COA dehyd 99.0 2.1E-09 7.1E-14 114.4 11.9 142 516-668 42-248 (359)
405 4fs7_A Uncharacterized protein 98.9 4.6E-08 1.6E-12 105.3 19.3 248 88-346 66-353 (394)
406 2ra8_A Uncharacterized protein 98.8 8.5E-10 2.9E-14 117.1 3.6 165 88-275 134-320 (362)
407 2ra8_A Uncharacterized protein 98.8 2.1E-09 7.1E-14 114.1 6.0 182 116-322 137-341 (362)
408 4fs7_A Uncharacterized protein 98.8 1.4E-07 4.8E-12 101.5 19.1 246 88-346 89-376 (394)
409 3rw6_A Nuclear RNA export fact 98.8 4.4E-10 1.5E-14 113.5 -1.6 20 51-71 78-99 (267)
410 4gt6_A Cell surface protein; l 98.7 9.4E-07 3.2E-11 95.0 20.6 262 94-369 65-368 (394)
411 3d1u_A Putative fructosamine-3 98.5 9.1E-07 3.1E-11 90.7 14.0 146 516-668 19-216 (288)
412 4gt6_A Cell surface protein; l 98.5 2E-06 6.8E-11 92.4 16.9 272 87-370 81-390 (394)
413 3rw6_A Nuclear RNA export fact 98.4 2E-08 6.7E-13 101.4 -1.4 78 189-268 169-257 (267)
414 3r70_A Aminoglycoside phosphot 98.4 7.6E-07 2.6E-11 92.9 10.6 136 513-668 38-237 (320)
415 1io0_A Tropomodulin; LRR prote 98.4 5.3E-08 1.8E-12 93.1 1.5 89 163-251 62-164 (185)
416 3sg8_A APH(2'')-ID; antibiotic 98.4 4.5E-07 1.5E-11 93.8 8.3 137 517-668 25-223 (304)
417 1io0_A Tropomodulin; LRR prote 98.4 8.8E-08 3E-12 91.6 1.7 116 159-274 29-163 (185)
418 3tdw_A Gentamicin resistance p 98.3 2.5E-06 8.6E-11 88.3 12.0 136 518-668 25-224 (306)
419 4h09_A Hypothetical leucine ri 98.1 9.9E-05 3.4E-09 78.5 19.8 245 88-346 64-320 (379)
420 3ovc_A Hygromycin-B 4-O-kinase 98.1 8.4E-06 2.9E-10 86.4 11.2 148 516-668 45-243 (362)
421 4h09_A Hypothetical leucine ri 98.1 0.00023 8E-09 75.6 20.7 262 91-368 44-320 (379)
422 3ats_A Putative uncharacterize 98.0 1.1E-05 3.7E-10 85.3 9.2 80 518-597 26-122 (357)
423 4gkh_A Aminoglycoside 3'-phosp 98.0 3.2E-05 1.1E-09 78.1 11.4 135 519-668 31-223 (272)
424 2q83_A YTAA protein; 2635576, 97.8 6.2E-05 2.1E-09 78.6 9.4 147 518-668 38-252 (346)
425 2olc_A MTR kinase, methylthior 97.7 0.00013 4.6E-09 78.1 11.0 74 517-593 35-120 (397)
426 3f7w_A Putative fructosamine-3 97.6 0.00044 1.5E-08 70.5 12.1 78 514-596 17-98 (288)
427 3e4g_A ATP synthase subunit S, 97.5 4E-05 1.4E-09 71.7 2.6 82 119-200 62-149 (176)
428 3e4g_A ATP synthase subunit S, 97.5 6.2E-05 2.1E-09 70.4 3.6 83 142-224 61-149 (176)
429 3jr1_A Putative fructosamine-3 97.3 0.0021 7.3E-08 66.2 14.1 144 516-664 40-232 (312)
430 2pyw_A Uncharacterized protein 97.2 0.0015 5.1E-08 70.5 11.2 72 517-592 39-122 (420)
431 2ppq_A HSK, HK, homoserine kin 97.1 0.00089 3E-08 69.2 8.3 166 501-668 6-217 (322)
432 1zyl_A Hypothetical protein YI 97.1 0.0033 1.1E-07 65.1 12.2 147 519-668 33-223 (328)
433 3dxq_A Choline/ethanolamine ki 96.9 0.0028 9.4E-08 64.9 9.3 71 517-595 23-95 (301)
434 1pgv_A TMD-1, tropomodulin TMD 96.7 0.0007 2.4E-08 64.5 3.2 89 162-250 66-169 (197)
435 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00068 2.3E-08 64.5 2.5 112 162-273 37-168 (197)
436 3csv_A Aminoglycoside phosphot 96.6 0.012 4.1E-07 61.0 11.7 145 519-668 25-217 (333)
437 1nw1_A Choline kinase (49.2 KD 96.3 0.0061 2.1E-07 65.8 7.8 72 518-595 79-159 (429)
438 3rfe_A Platelet glycoprotein I 96.1 0.0062 2.1E-07 53.9 5.6 35 144-178 33-67 (130)
439 3rfe_A Platelet glycoprotein I 96.1 0.0094 3.2E-07 52.8 6.5 36 167-202 32-67 (130)
440 2qg7_A Ethanolamine kinase PV0 96.1 0.015 5.2E-07 63.2 9.5 73 518-595 114-188 (458)
441 3c5i_A Choline kinase; choline 95.9 0.0071 2.4E-07 63.8 5.7 73 518-595 39-121 (369)
442 3feg_A Choline/ethanolamine ki 95.8 0.027 9.3E-07 59.5 9.5 142 519-668 57-254 (379)
443 3i1a_A Spectinomycin phosphotr 94.1 0.16 5.6E-06 52.6 9.7 32 637-668 205-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 93.0 0.22 7.7E-06 52.7 8.6 143 518-668 58-280 (401)
445 3mes_A Choline kinase; malaria 92.6 0.14 4.8E-06 54.9 6.3 73 518-595 76-157 (424)
446 2ks1_B Epidermal growth factor 90.4 0.25 8.5E-06 34.1 3.5 26 438-463 12-37 (44)
447 2l2t_A Receptor tyrosine-prote 90.0 0.2 7E-06 34.4 2.8 26 438-463 11-36 (44)
448 3cxl_A N-chimerin; SH2, RHO-GA 86.8 0.081 2.8E-06 57.5 -1.5 57 518-577 148-214 (463)
449 3g15_A CK, chetk-alpha, cholin 77.3 5.9 0.0002 41.7 8.6 29 640-668 246-280 (401)
450 4ann_A ESSB; membrane protein, 66.8 19 0.00066 34.1 8.5 88 564-669 42-129 (215)
451 4ano_A ESSB; membrane protein, 58.0 21 0.00071 34.0 6.9 53 612-669 81-134 (219)
452 2k9y_A Ephrin type-A receptor 48.9 5.6 0.00019 26.7 1.0 13 438-450 14-26 (41)
453 2knc_A Integrin alpha-IIB; tra 31.4 49 0.0017 23.7 3.6 17 437-453 13-29 (54)
454 1iij_A ERBB-2 receptor protein 31.1 11 0.00039 24.4 0.2 6 440-445 11-16 (35)
455 1cja_A Protein (actin-fragmin 30.2 1.3E+02 0.0043 30.6 7.8 132 521-669 78-238 (342)
456 2l8s_A Integrin alpha-1; trans 27.8 52 0.0018 23.5 3.2 16 438-453 11-26 (54)
457 2lz0_A Uncharacterized protein 22.4 1.2E+02 0.004 24.6 5.0 39 135-174 13-51 (100)
458 2k1a_A Integrin alpha-IIB; sin 21.3 63 0.0021 21.9 2.4 14 438-451 12-25 (42)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.9e-47 Score=445.02 Aligned_cols=348 Identities=28% Similarity=0.360 Sum_probs=276.0
Q ss_pred CCHHHHHHHHHHHHhCCCC--CCCCCCCCCCCCCCcceeecCCCEeEEEcCCCCcccccc---cCCccC-----------
Q 035786 22 DSAVQRSALLDLRSSLGLR--SRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGR---LNPRFA----------- 85 (693)
Q Consensus 22 ~~~~~~~aLl~~k~~l~~~--~~~W~~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~---~~~~~~----------- 85 (693)
..++|++||++||+++.++ +++|+.++| ||+|+||+|+.|+|++|+|++... .|. +++.+.
T Consensus 9 ~~~~~~~all~~k~~~~~~~~l~~W~~~~~-~C~w~gv~C~~~~v~~L~L~~~~l--~g~~~~l~~~l~~L~~L~~l~~~ 85 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKNLLPDWSSNKN-PCTFDGVTCRDDKVTSIDLSSKPL--NVGFSAVSSSLLSLTGLESLFLS 85 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSSTTCCTTSC-GGGSTTEEEETTEEEEEECTTSCC--CEEHHHHHHHTTTCTTCCEEECT
T ss_pred CCHHHHHHHHHHHhhCCCcccccCCCCCCC-CcCCcceEECCCcEEEEECCCCCc--CCccCccChhHhccCcccccCCc
Confidence 3678999999999999754 579985555 669999999989999999998653 344 333111
Q ss_pred -------ccccccCCCCCEEEccCCCCCCcCch--HhhhCCCCccEEEecCCCCCcCCCccc-CCCccCCEEecccCcCC
Q 035786 86 -------VDSLGNLTLLSSFNASGLSLPGSIPE--WFGYRLPALQVLDLRSCSLSGSIPGSF-GNLSRLNVLYLSGNSLA 155 (693)
Q Consensus 86 -------~~~l~~L~~L~~L~ls~~~l~g~ip~--~~~~~l~~L~~L~Ls~n~l~g~~p~~~-~~l~~L~~L~Ls~N~l~ 155 (693)
++.++++++|++|++++|.+.|.+|. .++. +++|++|+|++|.+++.+|..+ +++++|++|+|++|.++
T Consensus 86 ~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 86 NSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGS-CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGG-CTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred CCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhC-CCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 14678889999999999999998888 7875 9999999999999988888776 78899999999999998
Q ss_pred ccCccc---cCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCc
Q 035786 156 GNVPAT---LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPS 232 (693)
Q Consensus 156 ~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 232 (693)
+..|.. +.++++|++|++++|.+++.+|. ..+++|++|++++|.+++.+|. ++++++|++|++++|++++.+|.
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHH
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccH
Confidence 888876 78888888888888888876654 6788888888888888887776 88888888888888888888888
Q ss_pred cccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCC
Q 035786 233 EVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPN 312 (693)
Q Consensus 233 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~ 312 (693)
.++++++|++|++++|.+++.+|.. .+++|++|++++|.++|.+|..++..+++|++|++++|++++.+|..+..+++
T Consensus 242 ~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred HHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 8888888888888888888777765 77888888888888888888776555688888888888888888888888888
Q ss_pred CCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCC-CCCEEEccCCcceeecCCCc
Q 035786 313 LRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFR-KFSLIDLSSNYFQGTVADDR 378 (693)
Q Consensus 313 L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~-~l~~ldLs~N~l~g~ip~~~ 378 (693)
|++|+|++|+++|.+|...+..+..|++|++++|+++|.+|. ..+. +|+.||+++|.++|.+|..+
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~ 388 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTT
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhh
Confidence 888888888888888865466777777777777777777665 2233 56666666666666665543
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2e-44 Score=415.85 Aligned_cols=352 Identities=20% Similarity=0.324 Sum_probs=309.5
Q ss_pred CHHHHHHHHHHHHhCCCC-----------CCCCCCCCCCCCCC---cceeec-CCCEeEEEcCCCCcccccccCCccCcc
Q 035786 23 SAVQRSALLDLRSSLGLR-----------SRDWPLRTEPCRSW---RGVQCQ-NGQVIAINISGFKRTRIGRLNPRFAVD 87 (693)
Q Consensus 23 ~~~~~~aLl~~k~~l~~~-----------~~~W~~~~~~C~~W---~gv~C~-~~~v~~l~l~~~~~~~~g~~~~~~~~~ 87 (693)
...|+.||.++++++... ..+|+.+.+ ||.| .||+|+ .|||++|+|++.. ..|.+++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~-~c~w~~~~GV~C~~~~~V~~L~L~~~~--l~g~lp~----- 99 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKE-LDMWGAQPGVSLNSNGRVTGLSLEGFG--ASGRVPD----- 99 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSC-GGGTTCCTTEEECTTCCEEEEECTTSC--CEEEECG-----
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCC-cccccCCCCeEEcCCCCEEEEEecCcc--cCCcCCh-----
Confidence 347999999999998532 137986655 5589 999997 5899999999865 4588876
Q ss_pred ccccCCCCCEEEccCCCC--------------------------------------------------------------
Q 035786 88 SLGNLTLLSSFNASGLSL-------------------------------------------------------------- 105 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l-------------------------------------------------------------- 105 (693)
.+++|++|++|++++|.+
T Consensus 100 ~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 179 (636)
T 4eco_A 100 AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSS 179 (636)
T ss_dssp GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCC
T ss_pred HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccc
Confidence 789999999999998843
Q ss_pred ----------------CCcCchHhhhCCCCccEEEecCCCCCcC-----------------CCcccC--CCccCCEEecc
Q 035786 106 ----------------PGSIPEWFGYRLPALQVLDLRSCSLSGS-----------------IPGSFG--NLSRLNVLYLS 150 (693)
Q Consensus 106 ----------------~g~ip~~~~~~l~~L~~L~Ls~n~l~g~-----------------~p~~~~--~l~~L~~L~Ls 150 (693)
+| ||+.++. +++|++|+|++|.++|. +|..++ ++++|++|+|+
T Consensus 180 ~~~l~~l~l~~~~n~l~~-ip~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~ 257 (636)
T 4eco_A 180 RITLKDTQIGQLSNNITF-VSKAVMR-LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVY 257 (636)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccchhhhhhccccCCCcc-CCHHHhc-ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEec
Confidence 35 8888875 99999999999999996 999999 99999999999
Q ss_pred cCcCCccCccccCCCCCCCEEEccCCC-CCC-cCchhhhcC------cCCCeeecccccCCCcCcc--cccCCCCCCEEE
Q 035786 151 GNSLAGNVPATLGELKKLSNLDLSRNL-LTG-EIPNAISLL------GNLTRLNLASNFFTGQIPS--GLYSLSSIQFLN 220 (693)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~ 220 (693)
+|.+.+.+|+.++++++|++|+|++|+ ++| .+|..++.+ ++|++|++++|.++ .+|. .++.+++|+.|+
T Consensus 258 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 258 NCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred CCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 999999999999999999999999998 999 899999887 99999999999999 8998 899999999999
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcc-ccccccccccccccCCCcccCCC--CCCCEEEccCC
Q 035786 221 LSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRN-LAKLVISENGLEGQLSEGLFPTL--DQLQVVDLSGN 297 (693)
Q Consensus 221 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~N~l~g~i~~~~~~~l--~~L~~L~Ls~N 297 (693)
+++|+++|.+| .++++++|++|++++|+++ .+|..+.++++ |++|++++|.++ .+|..+ ..+ ++|+.|++++|
T Consensus 337 L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~-~~~~l~~L~~L~Ls~N 412 (636)
T 4eco_A 337 CLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIF-DAKSVSVMSAIDFSYN 412 (636)
T ss_dssp CCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCC-CTTCSSCEEEEECCSS
T ss_pred CcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhh-hhcccCccCEEECcCC
Confidence 99999999999 8999999999999999999 88999999999 999999999999 777653 444 48999999999
Q ss_pred cCCCcCccccc-------CCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCC----------CC
Q 035786 298 KLDGALPATLF-------LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFR----------KF 360 (693)
Q Consensus 298 ~l~g~~p~~l~-------~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~----------~l 360 (693)
++++.+|..+. .+++|+.|+|++|+++ .+|...+..++.|+.|+|++|+++ .+|...+. +|
T Consensus 413 ~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L 490 (636)
T 4eco_A 413 EIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLL 490 (636)
T ss_dssp CTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGC
T ss_pred cCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCc
Confidence 99999998888 7889999999999999 677655667889999999999998 77764443 89
Q ss_pred CEEEccCCcceeecCCCcC-------cccccCCCcCCCC
Q 035786 361 SLIDLSSNYFQGTVADDRG-------RNVSLGRNCLQSV 392 (693)
Q Consensus 361 ~~ldLs~N~l~g~ip~~~~-------~~~~l~~n~l~g~ 392 (693)
+.|||++|.++ .+|..+. +.+++++|.+.+.
T Consensus 491 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~i 528 (636)
T 4eco_A 491 TSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKF 528 (636)
T ss_dssp CEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSC
T ss_pred cEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCc
Confidence 99999999999 7887664 3578889988873
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9.9e-44 Score=418.09 Aligned_cols=354 Identities=21% Similarity=0.318 Sum_probs=300.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCC-----CCC-CCC------------cceeec-CCCEeEEEcCCCCccccccc
Q 035786 20 PLDSAVQRSALLDLRSSLGLRSRDWPLRT-----EPC-RSW------------RGVQCQ-NGQVIAINISGFKRTRIGRL 80 (693)
Q Consensus 20 ~~~~~~~~~aLl~~k~~l~~~~~~W~~~~-----~~C-~~W------------~gv~C~-~~~v~~l~l~~~~~~~~g~~ 80 (693)
+.+..+|++||++||+++.++ +|+.++ +|| |.| .||+|+ .+||++|+|++.. ..|.+
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~--~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~--L~G~i 339 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK--NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFG--AKGRV 339 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG--GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTC--CEEEE
T ss_pred cccchHHHHHHHHHHHHcCCC--CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCC--CCCcC
Confidence 334568999999999999765 897654 552 699 999998 6999999999875 45888
Q ss_pred CCccCccccccCCCCCEEEc-cCCCCCCc---------------------------------------------------
Q 035786 81 NPRFAVDSLGNLTLLSSFNA-SGLSLPGS--------------------------------------------------- 108 (693)
Q Consensus 81 ~~~~~~~~l~~L~~L~~L~l-s~~~l~g~--------------------------------------------------- 108 (693)
|+ ++++|++|+.|++ +.|.++|.
T Consensus 340 p~-----~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 340 PD-----AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CG-----GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred ch-----HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 76 7899999999999 77755444
Q ss_pred -------------------------CchHhhhCCCCccEEEecCCCCCc-----------------CCCcccC--CCccC
Q 035786 109 -------------------------IPEWFGYRLPALQVLDLRSCSLSG-----------------SIPGSFG--NLSRL 144 (693)
Q Consensus 109 -------------------------ip~~~~~~l~~L~~L~Ls~n~l~g-----------------~~p~~~~--~l~~L 144 (693)
||+.++. +++|++|+|++|.|+| .+|..++ ++++|
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~-L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L 493 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQR-LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL 493 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred cccccccccchhhceeccccCcccchhHHHhc-CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC
Confidence 8888875 9999999999999999 4899988 99999
Q ss_pred CEEecccCcCCccCccccCCCCCCCEEEccCCC-CCC-cCchhhhcCc-------CCCeeecccccCCCcCcc--cccCC
Q 035786 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-LTG-EIPNAISLLG-------NLTRLNLASNFFTGQIPS--GLYSL 213 (693)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l 213 (693)
++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++.++ +|++|+|++|.++ .+|. .++++
T Consensus 494 ~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L 572 (876)
T 4ecn_A 494 TDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKM 572 (876)
T ss_dssp CEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC
T ss_pred CEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcC
Confidence 999999999999999999999999999999998 998 8999888877 9999999999999 8998 89999
Q ss_pred CCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcc-ccccccccccccccCCCcccCCCC--CCC
Q 035786 214 SSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRN-LAKLVISENGLEGQLSEGLFPTLD--QLQ 290 (693)
Q Consensus 214 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~N~l~g~i~~~~~~~l~--~L~ 290 (693)
++|+.|+|++|+++ .+| .|+++++|+.|+|++|+++ .+|..+.++++ |++|+|++|.++ .+|.. +..++ +|+
T Consensus 573 ~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~-~~~~~~~~L~ 647 (876)
T 4ecn_A 573 VKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI-FNAKSVYVMG 647 (876)
T ss_dssp TTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC-CCTTCSSCEE
T ss_pred CCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchh-hhccccCCCC
Confidence 99999999999999 888 8999999999999999999 89999999999 999999999998 67754 35554 499
Q ss_pred EEEccCCcCCCcCcccc---c--CCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCC-------
Q 035786 291 VVDLSGNKLDGALPATL---F--LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFR------- 358 (693)
Q Consensus 291 ~L~Ls~N~l~g~~p~~l---~--~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~------- 358 (693)
.|++++|+++|.+|... . .+++|+.|+|++|+++ .+|...+..++.|+.|+|++|+++ .+|...+.
T Consensus 648 ~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~ 725 (876)
T 4ecn_A 648 SVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYK 725 (876)
T ss_dssp EEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCT
T ss_pred EEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccccccc
Confidence 99999999998776432 2 3458889999999988 677655557788889999999888 66653332
Q ss_pred ---CCCEEEccCCcceeecCCCcC-------cccccCCCcCCCC
Q 035786 359 ---KFSLIDLSSNYFQGTVADDRG-------RNVSLGRNCLQSV 392 (693)
Q Consensus 359 ---~l~~ldLs~N~l~g~ip~~~~-------~~~~l~~n~l~g~ 392 (693)
+|+.|+|++|+++ .+|..+. ..+++++|.+.+.
T Consensus 726 nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~l 768 (876)
T 4ecn_A 726 NTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSF 768 (876)
T ss_dssp TGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSC
T ss_pred ccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCcc
Confidence 7888999999888 6776654 2567888888773
No 4
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.7e-43 Score=369.10 Aligned_cols=289 Identities=33% Similarity=0.508 Sum_probs=244.0
Q ss_pred CCCHHHHHHHHHHHHhCCCC--CCCCCCCCCCCCC--CcceeecC----CCEeEEEcCCCCcccccccCCccCccccccC
Q 035786 21 LDSAVQRSALLDLRSSLGLR--SRDWPLRTEPCRS--WRGVQCQN----GQVIAINISGFKRTRIGRLNPRFAVDSLGNL 92 (693)
Q Consensus 21 ~~~~~~~~aLl~~k~~l~~~--~~~W~~~~~~C~~--W~gv~C~~----~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L 92 (693)
.|.++|++||++||+++.++ .++|..++++| . |.||+|+. ++|+.++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L----------------------- 57 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDL----------------------- 57 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEE-----------------------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEEC-----------------------
Confidence 47899999999999999753 46897666655 6 99999973 45655555
Q ss_pred CCCCEEEccCCCCCC--cCchHhhhCCCCccEEEecC-CCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCC
Q 035786 93 TLLSSFNASGLSLPG--SIPEWFGYRLPALQVLDLRS-CSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLS 169 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g--~ip~~~~~~l~~L~~L~Ls~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 169 (693)
++|.+.| .+|+.+.. +++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+.++++|+
T Consensus 58 --------~~~~l~~~~~~~~~l~~-l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 58 --------SGLNLPKPYPIPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp --------ECCCCSSCEECCGGGGG-CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred --------CCCCccCCcccChhHhC-CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 4456667 77888875 89999999984 888888898899999999999999999888898899999999
Q ss_pred EEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCC-CCCEEEccCCcccccCCccccCCCCCCEEEccCC
Q 035786 170 NLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLS-SIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248 (693)
Q Consensus 170 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 248 (693)
+|+|++|.+++.+|..+..+++|++|++++|.+++.+|..++.++ +|+.|++++|++++.+|..+..++ |++|++++|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 999999999888898999999999999999999888898888887 899999999999988998888887 999999999
Q ss_pred cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCC
Q 035786 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 249 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
.+++.+|..+..+++|++|+|++|.+++.++. +..+++|++|++++|++++.+|.++..+++|+.|+|++|+++|.+|
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 99988888888899999999999998877665 5678889999999999988889888888999999999999988888
Q ss_pred ccCcCCCCCCcEEEccCCc
Q 035786 329 ILSTNGNASGAVFNISNNM 347 (693)
Q Consensus 329 ~~~~~~~~~l~~l~ls~N~ 347 (693)
.. ..+..|+.+++++|+
T Consensus 286 ~~--~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 286 QG--GNLQRFDVSAYANNK 302 (313)
T ss_dssp CS--TTGGGSCGGGTCSSS
T ss_pred CC--ccccccChHHhcCCC
Confidence 53 555666666666666
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.4e-40 Score=392.28 Aligned_cols=304 Identities=31% Similarity=0.479 Sum_probs=211.2
Q ss_pred cccCCCCCEEEccCCCCCCcCchHhhhCCC-CccEEEecCCCCCcCCCcccCC--CccCCEEecccCcCCccCccccCCC
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLP-ALQVLDLRSCSLSGSIPGSFGN--LSRLNVLYLSGNSLAGNVPATLGEL 165 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~-~L~~L~Ls~n~l~g~~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l 165 (693)
+.+++.|++|++++|.+.|.+|..+.. ++ +|++|+|++|.++|.+|..+.. +++|++|+|++|.+++.+|..+.++
T Consensus 339 l~~l~~L~~L~Ls~n~l~~~~p~~l~~-l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l 417 (768)
T 3rgz_A 339 LLKMRGLKVLDLSFNEFSGELPESLTN-LSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC 417 (768)
T ss_dssp HTTCTTCCEEECCSSEEEECCCTTHHH-HTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGC
T ss_pred HhcCCCCCEEeCcCCccCccccHHHHh-hhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcC
Confidence 455666666666666666666655543 43 5555555555555555555544 5566666666666666677777777
Q ss_pred CCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEc
Q 035786 166 KKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDL 245 (693)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 245 (693)
++|++|+|++|.+++.+|..+..+++|+.|++++|.+++.+|..+..+++|++|++++|++++.+|..++++++|++|++
T Consensus 418 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 497 (768)
T 3rgz_A 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 497 (768)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEc
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCccccc-----------------
Q 035786 246 SKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF----------------- 308 (693)
Q Consensus 246 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~----------------- 308 (693)
++|++++.+|.+++.+++|++|+|++|+++|.+|..+ ..+++|+.|++++|+++|.+|..++
T Consensus 498 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~ 576 (768)
T 3rgz_A 498 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL-GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGG-GGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEE
T ss_pred cCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHH-cCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccc
Confidence 7777777777777777777777777777777776653 6677777777777777766665442
Q ss_pred -----------------------------------------------------CCCCCCEEEccCCcCcccCCccCcCCC
Q 035786 309 -----------------------------------------------------LRPNLRFLDLSRNNITGSWPILSTNGN 335 (693)
Q Consensus 309 -----------------------------------------------------~~~~L~~L~Ls~N~l~g~~p~~~~~~~ 335 (693)
.+++|+.|||++|+++|.+|. .+..+
T Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~-~l~~l 655 (768)
T 3rgz_A 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK-EIGSM 655 (768)
T ss_dssp EEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCG-GGGGC
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCH-HHhcc
Confidence 235677777777777777774 45667
Q ss_pred CCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC-----cccccCCCcCCCCccC
Q 035786 336 ASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSVASQ 395 (693)
Q Consensus 336 ~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~~~~ 395 (693)
..|+.|+|++|+++|.+|. ..+++|+.||||+|+++|.+|..+. +.+++++|.++|.+|.
T Consensus 656 ~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 656 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCS
T ss_pred ccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCC
Confidence 7777788888888777776 5677777888888888888777654 3567777877776654
No 6
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.3e-36 Score=336.58 Aligned_cols=331 Identities=19% Similarity=0.166 Sum_probs=223.2
Q ss_pred CCcc--eeecC----------CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCc
Q 035786 53 SWRG--VQCQN----------GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPAL 120 (693)
Q Consensus 53 ~W~g--v~C~~----------~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L 120 (693)
.|.+ |.|+. .+++.++|++... ..+.+ ..+.++++|++|++++|.+.+.+|+.....+++|
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i---~~~~~----~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L 81 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSI---AELNE----TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCC---CEECT----TTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTC
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCcc---CcCCh----hHhccCccccEEECcCCcccceECcccccccccC
Confidence 5555 88863 2477888887542 22322 3678899999999999999888865433459999
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccc--cCCCCCCCEEEccCCCCCCcCchh-hhcCcCCCeeec
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPAT--LGELKKLSNLDLSRNLLTGEIPNA-ISLLGNLTRLNL 197 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L 197 (693)
++|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..|.. +..+++|++|++
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L 161 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDL 161 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEEC
T ss_pred CEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeC
Confidence 99999999999888999999999999999999998866655 889999999999999999887876 889999999999
Q ss_pred ccccCCCcCcccccCC--CCCCEEEccCCcccccCCccc--------cCCCCCCEEEccCCcCcccCchhhhcC------
Q 035786 198 ASNFFTGQIPSGLYSL--SSIQFLNLSDNALTGFIPSEV--------GNLDKLIELDLSKNSISGSLPLELRGL------ 261 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l--~~L~~L~Ls~N~l~g~~p~~~--------~~l~~L~~L~Ls~N~l~g~~p~~~~~l------ 261 (693)
++|.+++..|..+..+ .+|+.|++++|.+.+..+..+ ..+++|++|++++|.+++..|..+..+
T Consensus 162 ~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L 241 (455)
T 3v47_A 162 TFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKI 241 (455)
T ss_dssp TTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCE
T ss_pred CCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccce
Confidence 9999998888777655 455555555555554333221 234556666666665555444433221
Q ss_pred ---------------------------------ccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCccccc
Q 035786 262 ---------------------------------RNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF 308 (693)
Q Consensus 262 ---------------------------------~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~ 308 (693)
++|++|++++|.+++.+|.. |..+++|+.|++++|++++..|..+.
T Consensus 242 ~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~ 320 (455)
T 3v47_A 242 QSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSV-FSHFTDLEQLTLAQNEINKIDDNAFW 320 (455)
T ss_dssp EEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTT-TTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred eeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhh-cccCCCCCEEECCCCcccccChhHhc
Confidence 35666666666666544433 45666666666666666666666666
Q ss_pred CCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC-----cc
Q 035786 309 LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG-----RN 381 (693)
Q Consensus 309 ~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~~ 381 (693)
.+++|+.|+|++|++++..| ..+..++.|+.|++++|++++..|. ..+++|+.|||++|++++..+..+. +.
T Consensus 321 ~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 321 GLTHLLKLNLSQNFLGSIDS-RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp TCTTCCEEECCSSCCCEECG-GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CcccCCEEECCCCccCCcCh-hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccE
Confidence 66666666666666654444 3445566666666666666655543 4456666666666666653332222 24
Q ss_pred cccCCCcCCCC
Q 035786 382 VSLGRNCLQSV 392 (693)
Q Consensus 382 ~~l~~n~l~g~ 392 (693)
+++++|.+.+.
T Consensus 400 L~l~~N~l~~~ 410 (455)
T 3v47_A 400 IWLHTNPWDCS 410 (455)
T ss_dssp EECCSSCBCCC
T ss_pred EEccCCCcccC
Confidence 55666655544
No 7
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8.4e-37 Score=321.76 Aligned_cols=172 Identities=23% Similarity=0.303 Sum_probs=134.4
Q ss_pred CCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||+||+|++. +++.||||+++..... .++|.+|+++|++++|||||+++|+|.+ ++..+|
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~l 120 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLLM 120 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEE
Confidence 3555678999999999999874 4789999999754433 5789999999999999999999999986 467899
Q ss_pred EEccCCCCChhhhhhccCCCC-------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 586 VYKYMVCGDLASSLHRVTDLE-------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~-------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
|||||++|+|.++|+...... .....+++|.++++|+.|||+||+|||+. +||||||||+|||||+++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 999999999999998643211 11234699999999999999999999987 89999999999999999999
Q ss_pred EECCcccccccCCC-Ccceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~-~~~~~~~~~~~~~y~a 688 (693)
||+|||+++..... .....+..+||+.|||
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymA 228 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 228 (329)
T ss_dssp EECCCC----------------CCCCGGGCC
T ss_pred EEcccccceeccCCCcceecCcccccccccC
Confidence 99999999987432 2333455778888887
No 8
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.8e-37 Score=318.64 Aligned_cols=170 Identities=21% Similarity=0.298 Sum_probs=139.9
Q ss_pred CccCccccCCeeeEEEEEeC------CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 515 SETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
...+.||+|+||+||||++. +++.||||+++.... ..++|.+|++++++++|||||+++|+|.+ ++..+||
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~~lV 107 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-DQPLSMI 107 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEE
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-CCEEEEE
Confidence 34567999999999999973 467899999975433 25789999999999999999999999976 4678999
Q ss_pred EccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 587 YKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
||||++|||.++|+...... ......++|.++++|+.|||+||+|||+. +||||||||+|||||+++++
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence 99999999999997543211 01124699999999999999999999998 89999999999999999999
Q ss_pred EECCcccccccCCC-Ccceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~-~~~~~~~~~~~~~y~a 688 (693)
||+|||+++..... .....+..+||+.|||
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymA 215 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMA 215 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCC
T ss_pred EECCcccceeccCCCceeEecccccCCcccC
Confidence 99999999987332 2223445678888876
No 9
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=6.6e-37 Score=318.22 Aligned_cols=172 Identities=23% Similarity=0.342 Sum_probs=139.9
Q ss_pred CCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||+||+|++. +++.||||+++....+ .++|.+|+++|++++|||||+++|+|.+ ++..+|
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~l 92 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLIM 92 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-CCEEEE
Confidence 4556678999999999999864 4788999999764433 5689999999999999999999999986 467899
Q ss_pred EEccCCCCChhhhhhccCC-----CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 586 VYKYMVCGDLASSLHRVTD-----LEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~-----~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
|||||++|+|.++|+.... ........++|.++++|+.|||+||+|||+. +||||||||+|||||+++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 9999999999999986421 0112235699999999999999999999998 8999999999999999999999
Q ss_pred CCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
+|||+|+........ ......||+.|||
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymA 198 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMP 198 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCC
T ss_pred CCcccceecCCCCceeecCceecChhhcC
Confidence 999999987443322 2333568888887
No 10
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=315.65 Aligned_cols=163 Identities=19% Similarity=0.351 Sum_probs=134.8
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+++...+.||+|+||+||+|++.+ .||||+++..... .++|.+|+++|++++|||||+++|+|.+ +..+||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~~iVmE 111 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--DNLAIVTQ 111 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--CeEEEEEE
Confidence 346667889999999999999864 5999998754322 4689999999999999999999999853 46899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||++|+|.++|+... ..++|.++++|+.|||+||+|||+. +||||||||+|||||+++++||+|||+|+.
T Consensus 112 y~~gGsL~~~l~~~~-------~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 181 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE-------TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp CCSSCBHHHHHHTSC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred cCCCCCHHHHHhhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCcee
Confidence 999999999997543 3599999999999999999999988 999999999999999999999999999998
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... .....+..+||+.|||
T Consensus 182 ~~~~~~~~~~~~~~GT~~ymA 202 (307)
T 3omv_A 182 KSRWSGSQQVEQPTGSVLWMA 202 (307)
T ss_dssp ------------CCCCTTSCC
T ss_pred cccCCcceeecccccCCCccC
Confidence 7432 2223455788999987
No 11
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.6e-36 Score=316.96 Aligned_cols=165 Identities=21% Similarity=0.284 Sum_probs=133.9
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC---eeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET---EKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~---~~~lv~ey~ 590 (693)
+...+.||+|+||+||+|++ +|+.||||+++........+.+|+..+.+++|||||+++|+|.+.+. ..+||||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 44567899999999999998 48999999997543333334456666788999999999999986432 478999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
++|+|.++|+. ..++|.++.+|+.|+|+||+|||+++ .++||||||||+|||||+++++||+|||+
T Consensus 84 ~~gsL~~~l~~---------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 84 EHGSLFDYLNR---------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp TTCBHHHHHHH---------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred CCCcHHHHHHh---------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 99999999975 24899999999999999999999873 67999999999999999999999999999
Q ss_pred ccccCCCCcc---eeeeeehhhhhhh
Q 035786 666 LHAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
|+.......+ ..+..+||++|||
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymA 180 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMA 180 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCC
T ss_pred CccccCCCCceeeecccccccccccC
Confidence 9987433222 2334679999987
No 12
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7e-35 Score=336.12 Aligned_cols=266 Identities=23% Similarity=0.345 Sum_probs=124.5
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCC-CCc-CCCcccCCC------ccCCEEecccCcCCccCcc--
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCS-LSG-SIPGSFGNL------SRLNVLYLSGNSLAGNVPA-- 160 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~-l~g-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~-- 160 (693)
++++|++|++++|.+.|.+|+.++. +++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|.
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~ 324 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKA-LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVET 324 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTT-CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhc-CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchh
Confidence 4455555555555555555544442 5555555555554 444 444444443 45555555555554 4444
Q ss_pred ccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCC-CCEEEccCCcccccCCccccCCC-
Q 035786 161 TLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSS-IQFLNLSDNALTGFIPSEVGNLD- 238 (693)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~N~l~g~~p~~~~~l~- 238 (693)
.++++++|++|+|++|.++|.+| .+..+++|++|++++|.++ .+|..+..+++ |+.|++++|+++ .+|..+..++
T Consensus 325 ~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l 401 (636)
T 4eco_A 325 SLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSV 401 (636)
T ss_dssp HHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCS
T ss_pred hhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhccc
Confidence 45555555555555555554444 4444455555555555544 44444444444 555555555544 3444444333
Q ss_pred -CCCEEEccCCcCcccCchhhh-------cCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCC
Q 035786 239 -KLIELDLSKNSISGSLPLELR-------GLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310 (693)
Q Consensus 239 -~L~~L~Ls~N~l~g~~p~~~~-------~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~ 310 (693)
+|++|++++|.+++.+|..+. .+++|++|+|++|+++ .+|..++..+++|+.|++++|+++ .+|......
T Consensus 402 ~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~ 479 (636)
T 4eco_A 402 SVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKD 479 (636)
T ss_dssp SCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEE
T ss_pred CccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhcc
Confidence 445555555555444444444 4444444555554444 344444444444444444444444 333322211
Q ss_pred C--------CCCEEEccCCcCcccCCccCc-CCCCCCcEEEccCCccceecCC--CCCCCCCEEEc
Q 035786 311 P--------NLRFLDLSRNNITGSWPILST-NGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDL 365 (693)
Q Consensus 311 ~--------~L~~L~Ls~N~l~g~~p~~~~-~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldL 365 (693)
. +|+.|+|++|+++ .+|.... ..++.|+.|+|++|++++ +|. ..+++|+.|+|
T Consensus 480 ~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 480 ENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp TTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred ccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 1 4444444444444 3442221 144444444444444444 333 23444444444
No 13
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.7e-34 Score=318.00 Aligned_cols=300 Identities=22% Similarity=0.229 Sum_probs=262.4
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCC-CcccCCCccCCEEecccCcCCccCccccCCCCCCCEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSI-PGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNL 171 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 171 (693)
++|++|++++|.+.+..|..+. .+++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFS-RLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTS-SCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CccCEEEecCCccCcCChhHhc-cCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 6899999999999988888886 4999999999999998766 5679999999999999999999999999999999999
Q ss_pred EccCCCCCCcCchh--hhcCcCCCeeecccccCCCcCccc-ccCCCCCCEEEccCCcccccCCccccCC--CCCCEEEcc
Q 035786 172 DLSRNLLTGEIPNA--ISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNL--DKLIELDLS 246 (693)
Q Consensus 172 ~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l--~~L~~L~Ls 246 (693)
+|++|.+++.+|.. +..+++|++|+|++|.+++..|.. +..+++|++|++++|++++..|..+..+ .+|+.|+++
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~ 188 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLS 188 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECT
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccc
Confidence 99999999876665 999999999999999999888876 8899999999999999999999988876 789999999
Q ss_pred CCcCcccCchhh--------hcCccccccccccccccccCCCccc-----------------------------------
Q 035786 247 KNSISGSLPLEL--------RGLRNLAKLVISENGLEGQLSEGLF----------------------------------- 283 (693)
Q Consensus 247 ~N~l~g~~p~~~--------~~l~~L~~L~Ls~N~l~g~i~~~~~----------------------------------- 283 (693)
+|.+++..+..+ ..+++|++|++++|.+++.+|..++
T Consensus 189 ~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~ 268 (455)
T 3v47_A 189 SITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268 (455)
T ss_dssp TCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTT
T ss_pred cCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccc
Confidence 999997665443 3668999999999998765443211
Q ss_pred -C--CCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCC
Q 035786 284 -P--TLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFR 358 (693)
Q Consensus 284 -~--~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~ 358 (693)
. ..++|+.|++++|++++.+|..+..+++|+.|+|++|++++..| ..+..+..|+.|++++|.+.+..|. ..++
T Consensus 269 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 347 (455)
T 3v47_A 269 FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDD-NAFWGLTHLLKLNLSQNFLGSIDSRMFENLD 347 (455)
T ss_dssp TGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCEECGGGGTTCT
T ss_pred cccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccCh-hHhcCcccCCEEECCCCccCCcChhHhcCcc
Confidence 0 12589999999999999999999999999999999999998767 4567889999999999999887665 6788
Q ss_pred CCCEEEccCCcceeecCCCcC-----cccccCCCcCCCCcc
Q 035786 359 KFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSVAS 394 (693)
Q Consensus 359 ~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~~~ 394 (693)
+|+.|||++|.+++..|..+. +.+++++|.+.+.++
T Consensus 348 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 388 (455)
T 3v47_A 348 KLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPD 388 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCEEECCCCcccccChhhccccccccEEECCCCccccCCH
Confidence 999999999999999887765 368899999987543
No 14
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.6e-35 Score=305.97 Aligned_cols=251 Identities=30% Similarity=0.481 Sum_probs=232.4
Q ss_pred CCccEEEecCCCCCc--CCCcccCCCccCCEEeccc-CcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCe
Q 035786 118 PALQVLDLRSCSLSG--SIPGSFGNLSRLNVLYLSG-NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTR 194 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 194 (693)
.+++.|+|++|.++| .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred eecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCC-CCCEEEccCCcCcccCchhhhcCcccccccccccc
Q 035786 195 LNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLD-KLIELDLSKNSISGSLPLELRGLRNLAKLVISENG 273 (693)
Q Consensus 195 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 273 (693)
|++++|.+++.+|..+..+++|++|++++|++++.+|..++.++ +|++|++++|++++.+|..+..++ |++|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999997 9999999999
Q ss_pred ccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 274 LEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 274 l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
+++.+|. .|..+++|+.|++++|++++.+|. +..+++|++|+|++|+++|.+|. .+..++.|+.|++++|+++|.+|
T Consensus 209 l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 209 LEGDASV-LFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQ-GLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp EEECCGG-GCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCG-GGGGCTTCCEEECCSSEEEEECC
T ss_pred ccCcCCH-HHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCCh-HHhcCcCCCEEECcCCcccccCC
Confidence 9987665 468899999999999999988776 78889999999999999999995 45778899999999999999988
Q ss_pred C-CCCCCCCEEEccCCc-cee
Q 035786 354 S-SSFRKFSLIDLSSNY-FQG 372 (693)
Q Consensus 354 ~-~~~~~l~~ldLs~N~-l~g 372 (693)
. ..+++|+.+++++|+ +.|
T Consensus 286 ~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 286 QGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CSTTGGGSCGGGTCSSSEEES
T ss_pred CCccccccChHHhcCCCCccC
Confidence 7 567788888898887 555
No 15
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.6e-35 Score=306.38 Aligned_cols=163 Identities=20% Similarity=0.299 Sum_probs=143.1
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|+..+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+++|++++|||||++++++.+ ++..||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeC
Confidence 3477778899999999999996 46999999999754433 5678999999999999999999999876 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|++|+|.++++. ..+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+.+
T Consensus 153 ~~gg~L~~~l~~---------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 220 (346)
T 4fih_A 153 LEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220 (346)
T ss_dssp CTTEEHHHHHHH---------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CCCCcHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceec
Confidence 999999999975 2489999999999999999999998 9999999999999999999999999999987
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .+..+||++|||
T Consensus 221 ~~~~~~-~~~~~GTp~YmA 238 (346)
T 4fih_A 221 SKEVPR-RKSLVGTPYWMA 238 (346)
T ss_dssp CSSSCC-BCCCCSCGGGCC
T ss_pred CCCCCc-ccccccCcCcCC
Confidence 544332 455889999997
No 16
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=314.15 Aligned_cols=277 Identities=21% Similarity=0.167 Sum_probs=164.2
Q ss_pred CCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEc
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDL 173 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 173 (693)
.++.|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFA-SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTT-TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCcEEECCCCccceECHhHcc-CCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 455666666666655555554 3666666666666666655666666666666666666666544445566666666666
Q ss_pred cCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCccc
Q 035786 174 SRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGS 253 (693)
Q Consensus 174 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 253 (693)
++|.+++..|..+..+++|++|++++|.+++..|..|..+++|+.|+|++|++++..+..+.++++|+.|++++|.+++.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 66666655566666666666666666666655555666666666666666666655445566666666666666666655
Q ss_pred CchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcC
Q 035786 254 LPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTN 333 (693)
Q Consensus 254 ~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~ 333 (693)
.+..|..+++|++|++++|.+.+.++...+. ..+|+.|++++|++++..+..+..+++|+.|+|++|++++..+ ..+.
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~-~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~ 269 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLY-GLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEG-SMLH 269 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTT-TCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECT-TSCT
T ss_pred ChhhcccCcccceeeCCCCccccccCccccc-CccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccCh-hhcc
Confidence 5555666666666666666655555554433 2356666666666664444455556666666666666654333 3445
Q ss_pred CCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceee
Q 035786 334 GNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 334 ~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ 373 (693)
.+..|+.|+|++|++.+..|. ..+++|+.|||++|.+++.
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 311 (477)
T 2id5_A 270 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTL 311 (477)
T ss_dssp TCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCC
T ss_pred ccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCcee
Confidence 555666666666666655443 3445566666666666553
No 17
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.5e-34 Score=306.18 Aligned_cols=278 Identities=19% Similarity=0.262 Sum_probs=179.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCC----CCCC---CCCCCCCCCcceeecCCCEeEEEcCCCCcccccccCCccCcccccc
Q 035786 19 VPLDSAVQRSALLDLRSSLGLRS----RDWP---LRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGN 91 (693)
Q Consensus 19 ~~~~~~~~~~aLl~~k~~l~~~~----~~W~---~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~ 91 (693)
......+|++||++||+++.... .+|. .....||.|.|+.|+.-. ..+ .-..
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~--------------~~l-------~~~~ 79 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATA--------------DLL-------EDAT 79 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHH--------------HHH-------HHHT
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhH--------------HHH-------hccc
Confidence 34456689999999999884222 4673 223334589999995100 000 0112
Q ss_pred CCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEE
Q 035786 92 LTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNL 171 (693)
Q Consensus 92 L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 171 (693)
.+.++.|++++|.+. .+|+.++. +++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..++++++|++|
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~-l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFR-LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGG-GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred ccceeEEEccCCCch-hcChhhhh-CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 345566666666665 66666654 777777777777777 66777777777777777777776 667777777777777
Q ss_pred EccCCCCCCcCchhhhc---------CcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCE
Q 035786 172 DLSRNLLTGEIPNAISL---------LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIE 242 (693)
Q Consensus 172 ~Ls~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 242 (693)
+|++|++.+.+|..+.. +++|++|+|++|.++ .+|..++.+++|++|+|++|++++ +|..++.+++|++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 77777777777766543 666666666666666 566666666666666666666664 4455666666666
Q ss_pred EEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCc
Q 035786 243 LDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNN 322 (693)
Q Consensus 243 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~ 322 (693)
|++++|.+.+.+|..+.++++|++|+|++|++.+.+|.. +..+++|+.|++++|++.+.+|.++..+++|+.+++..|.
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~-~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLD-IHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTT-GGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred EECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchh-hhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 666666666666666666666666666666666666654 3556666666666666666666666666666666666555
Q ss_pred Cc
Q 035786 323 IT 324 (693)
Q Consensus 323 l~ 324 (693)
+.
T Consensus 313 ~~ 314 (328)
T 4fcg_A 313 QA 314 (328)
T ss_dssp SC
T ss_pred HH
Confidence 43
No 18
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.3e-33 Score=319.81 Aligned_cols=318 Identities=23% Similarity=0.242 Sum_probs=210.4
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS 142 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~ 142 (693)
+++.++|++.... .+++ ..+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|++++
T Consensus 33 ~l~~L~Ls~n~l~---~~~~----~~~~~l~~L~~L~Ls~n~l~~i~~~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 104 (606)
T 3vq2_A 33 STKNIDLSFNPLK---ILKS----YSFSNFSELQWLDLSRCEIETIEDKAWH-GLHHLSNLILTGNPIQSFSPGSFSGLT 104 (606)
T ss_dssp TCCEEECTTSCCC---EECT----TTTTTCTTCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCCCCTTSSTTCT
T ss_pred CcCEEECCCCCcC---EeCh----hhccCCccCcEEeCCCCcccccCHHHhh-chhhcCEeECCCCcccccChhhcCCcc
Confidence 5788888875422 2222 2456677777777777777665565554 377777777777777766677777777
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCcccc-----------
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGL----------- 210 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~----------- 210 (693)
+|++|+|++|.+++..|..++++++|++|+|++|.+++ .+|..++++++|++|++++|.+++..|..+
T Consensus 105 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~ 184 (606)
T 3vq2_A 105 SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNL 184 (606)
T ss_dssp TCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCC
T ss_pred cCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccc
Confidence 77777777777766555666677777777777776664 456666666666666666666554433222
Q ss_pred --------------------------------------------------------------------------------
Q 035786 211 -------------------------------------------------------------------------------- 210 (693)
Q Consensus 211 -------------------------------------------------------------------------------- 210 (693)
T Consensus 185 ~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 264 (606)
T 3vq2_A 185 SLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID 264 (606)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEE
T ss_pred eeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHh
Confidence
Q ss_pred ---------------------------------------cCCCCCCEEEccCCcccccCCc-------------------
Q 035786 211 ---------------------------------------YSLSSIQFLNLSDNALTGFIPS------------------- 232 (693)
Q Consensus 211 ---------------------------------------~~l~~L~~L~Ls~N~l~g~~p~------------------- 232 (693)
..+++|+.|++++|++ +.+|.
T Consensus 265 ~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~ 343 (606)
T 3vq2_A 265 EFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSIS 343 (606)
T ss_dssp EEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEE
T ss_pred heeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccc
Confidence 1122333444444433 22331
Q ss_pred -cccCCCCCCEEEccCCcCccc--CchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCc-cccc
Q 035786 233 -EVGNLDKLIELDLSKNSISGS--LPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP-ATLF 308 (693)
Q Consensus 233 -~~~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p-~~l~ 308 (693)
.++.+++|++|++++|.+++. +|..+..+++|++|++++|.+++ +| ..|..+++|+.|++++|++++..| ..+.
T Consensus 344 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 344 FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MS-ANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp CCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-EC-CCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred hhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-ch-hhccCCCCCCeeECCCCccCCccChhhhh
Confidence 234566777888888888765 47778888888888888888775 44 335677788888888888877766 5677
Q ss_pred CCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCcccee-cCC--CCCCCCCEEEccCCcceeecCCCcC-----c
Q 035786 309 LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGD-LNS--SSFRKFSLIDLSSNYFQGTVADDRG-----R 380 (693)
Q Consensus 309 ~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~-~~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~ 380 (693)
.+++|+.|++++|++++..|. .+..+++|+.|++++|.+.+. +|. ..+++|+.|||++|.+++..|..+. +
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 500 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDG-IFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTT-TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccccCCEEECcCCCCCccchh-hhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCC
Confidence 778888888888888776663 456677788888888887763 443 4567777888888888777776554 3
Q ss_pred ccccCCCcCCCC
Q 035786 381 NVSLGRNCLQSV 392 (693)
Q Consensus 381 ~~~l~~n~l~g~ 392 (693)
.+++++|.+.+.
T Consensus 501 ~L~Ls~N~l~~~ 512 (606)
T 3vq2_A 501 LLNMSHNNLLFL 512 (606)
T ss_dssp EEECCSSCCSCE
T ss_pred EEECCCCcCCCc
Confidence 566777777664
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.3e-35 Score=307.91 Aligned_cols=166 Identities=17% Similarity=0.266 Sum_probs=137.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||+||+|+. .+|+.||||++...... .+.|.+|+++|++++|||||++++++.+ ++..|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-NGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEE
Confidence 4577888999999999999996 56999999999754433 4679999999999999999999998875 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
|||++|+|.++|+.... ..+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+
T Consensus 103 Ey~~gg~L~~~i~~~~~------~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 173 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKG------VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR 173 (350)
T ss_dssp ECCTTCBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEES
T ss_pred eCCCCCcHHHHHHHcCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccce
Confidence 99999999999975432 3478999999999999999999998 99999999999999999999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... ..+..+||++|||
T Consensus 174 ~~~~~~~-~~~~~~GT~~YmA 193 (350)
T 4b9d_A 174 VLNSTVE-LARACIGTPYYLS 193 (350)
T ss_dssp CCCHHHH-HHHHHHSCCTTCC
T ss_pred eecCCcc-cccccCCCccccC
Confidence 8754322 2345789999987
No 20
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-33 Score=331.25 Aligned_cols=311 Identities=21% Similarity=0.261 Sum_probs=238.8
Q ss_pred CCEeEEEcCCCCccccc-----------------ccCCccCccccc--cCCCCCEEEccCCCCCCcCchHhhhCCCCccE
Q 035786 62 GQVIAINISGFKRTRIG-----------------RLNPRFAVDSLG--NLTLLSSFNASGLSLPGSIPEWFGYRLPALQV 122 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g-----------------~~~~~~~~~~l~--~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~ 122 (693)
.+...|+|++... .| .+|+ .++ ++++|+.|++++|.+.|.+|..++. +++|++
T Consensus 448 ~~L~~L~Ls~N~L--sg~~i~~~~~~~s~n~~~g~iP~-----~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~-L~~L~~ 519 (876)
T 4ecn_A 448 TKLQIIYFANSPF--TYDNIAVDWEDANSDYAKQYENE-----ELSWSNLKDLTDVELYNCPNMTQLPDFLYD-LPELQS 519 (876)
T ss_dssp TTCCEEEEESCCC--CGGGBSSSCSCTTSHHHHHHTTS-----CCCGGGCTTCCEEEEESCTTCCSCCGGGGG-CSSCCE
T ss_pred CCCCEEECcCCcC--CCCcccccccccccccccccCCh-----hhhhccCCCCCEEECcCCCCCccChHHHhC-CCCCCE
Confidence 4677888887553 24 2443 555 8999999999999999999998875 999999
Q ss_pred EEecCCC-CCc-CCCcccCCCc-------cCCEEecccCcCCccCcc--ccCCCCCCCEEEccCCCCCCcCchhhhcCcC
Q 035786 123 LDLRSCS-LSG-SIPGSFGNLS-------RLNVLYLSGNSLAGNVPA--TLGELKKLSNLDLSRNLLTGEIPNAISLLGN 191 (693)
Q Consensus 123 L~Ls~n~-l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 191 (693)
|+|++|+ ++| .+|..+++++ +|++|+|++|.++ .+|. .++++++|++|+|++|.++ .+| .+..+++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 9999998 998 8887766655 9999999999998 8888 8999999999999999998 888 8889999
Q ss_pred CCeeecccccCCCcCcccccCCCC-CCEEEccCCcccccCCccccCCCC--CCEEEccCCcCcccCchh---hh--cCcc
Q 035786 192 LTRLNLASNFFTGQIPSGLYSLSS-IQFLNLSDNALTGFIPSEVGNLDK--LIELDLSKNSISGSLPLE---LR--GLRN 263 (693)
Q Consensus 192 L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~N~l~g~~p~~~~~l~~--L~~L~Ls~N~l~g~~p~~---~~--~l~~ 263 (693)
|+.|+|++|.++ .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|++++|++++.+|.. +. .+++
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 999999999998 88888999988 999999999998 77888777654 888888888888766532 22 3347
Q ss_pred ccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCC--------CCCEEEccCCcCcccCCccCc-CC
Q 035786 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP--------NLRFLDLSRNNITGSWPILST-NG 334 (693)
Q Consensus 264 L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~--------~L~~L~Ls~N~l~g~~p~~~~-~~ 334 (693)
|+.|+|++|.++ .+|..++..+++|+.|+|++|+++ .+|..+.... +|+.|+|++|+|+ .+|.... ..
T Consensus 675 L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 675 ASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp EEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred cCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 777778777777 566666666777777777777777 5555544322 7777777777777 5664332 36
Q ss_pred CCCCcEEEccCCccceecCC--CCCCCCCEEEccC------CcceeecCCCcC-----cccccCCCcC
Q 035786 335 NASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSS------NYFQGTVADDRG-----RNVSLGRNCL 389 (693)
Q Consensus 335 ~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~------N~l~g~ip~~~~-----~~~~l~~n~l 389 (693)
+++|+.|+|++|++++ +|. ..+++|+.|+|++ |.+.+.+|..+. +.+++++|.+
T Consensus 752 l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred CCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 6777777777777776 554 4567777777755 667777776654 2466777777
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-33 Score=320.38 Aligned_cols=326 Identities=26% Similarity=0.303 Sum_probs=189.5
Q ss_pred CCCCcceeecC-------------CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCC
Q 035786 51 CRSWRGVQCQN-------------GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRL 117 (693)
Q Consensus 51 C~~W~gv~C~~-------------~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l 117 (693)
| .|.|| |+. .+++.++|++... ..+++ ..+.++++|++|++++|.+.+..|..|. .+
T Consensus 4 C-~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l---~~~~~----~~~~~l~~L~~L~Ls~n~i~~~~~~~~~-~l 73 (549)
T 2z81_A 4 C-DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKI---TYIGH----GDLRACANLQVLILKSSRINTIEGDAFY-SL 73 (549)
T ss_dssp E-CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCC---CEECS----STTSSCTTCCEEECTTSCCCEECTTTTT-TC
T ss_pred C-CCCce-EECCCCccccccccCCCCccEEECcCCcc---CccCh----hhhhcCCcccEEECCCCCcCccChhhcc-cc
Confidence 5 79998 862 1577888887542 22222 2456677777777777777766666665 37
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCc-cCccccCCCCCCCEEEccCCCCCCcCc-hhhhcCcCCCee
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAG-NVPATLGELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRL 195 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 195 (693)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++ ..|..++++++|++|++++|.+.+.+| ..+..+++|++|
T Consensus 74 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 153 (549)
T 2z81_A 74 GSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNEL 153 (549)
T ss_dssp TTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred ccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCee
Confidence 777777777777776666667777777777777777765 345666777777777777776444444 456666667777
Q ss_pred ecccccCCCcCcccccC------------------------CCCCCEEEccCCccccc----------------------
Q 035786 196 NLASNFFTGQIPSGLYS------------------------LSSIQFLNLSDNALTGF---------------------- 229 (693)
Q Consensus 196 ~Ls~N~l~g~~p~~~~~------------------------l~~L~~L~Ls~N~l~g~---------------------- 229 (693)
++++|.+++.+|..+.. +++|++|++++|++++.
T Consensus 154 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n 233 (549)
T 2z81_A 154 EIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGS 233 (549)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESC
T ss_pred eccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceecccc
Confidence 77766666655555443 44556666666665542
Q ss_pred --------------------------------------------------------------------------------
Q 035786 230 -------------------------------------------------------------------------------- 229 (693)
Q Consensus 230 -------------------------------------------------------------------------------- 229 (693)
T Consensus 234 ~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~ 313 (549)
T 2z81_A 234 VLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVK 313 (549)
T ss_dssp EEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCC
T ss_pred ccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccce
Confidence
Q ss_pred -----------CCccc-cCCCCCCEEEccCCcCcccCch---hhhcCccccccccccccccccCC-CcccCCCCCCCEEE
Q 035786 230 -----------IPSEV-GNLDKLIELDLSKNSISGSLPL---ELRGLRNLAKLVISENGLEGQLS-EGLFPTLDQLQVVD 293 (693)
Q Consensus 230 -----------~p~~~-~~l~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~~L~Ls~N~l~g~i~-~~~~~~l~~L~~L~ 293 (693)
+|..+ .++++|++|++++|++++.+|. .++.+++|++|++++|++++..+ ...+..+++|++|+
T Consensus 314 ~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~ 393 (549)
T 2z81_A 314 RITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLD 393 (549)
T ss_dssp EEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEE
T ss_pred EEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEE
Confidence 11111 1234444444444444443322 13344444444444444432111 01234445555555
Q ss_pred ccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceee
Q 035786 294 LSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 294 Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ 373 (693)
+++|+++ .+|..+..+++|++|++++|++++ +|.. ....|+.|++++|++++.+ ..+++|+.|||++|+++ .
T Consensus 394 Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~---~~~~L~~L~Ls~N~l~~~~--~~l~~L~~L~Ls~N~l~-~ 465 (549)
T 2z81_A 394 ISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTC---IPQTLEVLDVSNNNLDSFS--LFLPRLQELYISRNKLK-T 465 (549)
T ss_dssp CTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTT---SCTTCSEEECCSSCCSCCC--CCCTTCCEEECCSSCCS-S
T ss_pred CCCCCCc-cCChhhcccccccEEECCCCCccc-ccch---hcCCceEEECCCCChhhhc--ccCChhcEEECCCCccC-c
Confidence 5555555 344445555555555555555542 2211 1235666666666666543 36778999999999998 6
Q ss_pred cCCCcC----cccccCCCcCCCCcc
Q 035786 374 VADDRG----RNVSLGRNCLQSVAS 394 (693)
Q Consensus 374 ip~~~~----~~~~l~~n~l~g~~~ 394 (693)
+|.... +.+++++|.+++.++
T Consensus 466 ip~~~~l~~L~~L~Ls~N~l~~~~~ 490 (549)
T 2z81_A 466 LPDASLFPVLLVMKISRNQLKSVPD 490 (549)
T ss_dssp CCCGGGCTTCCEEECCSSCCCCCCT
T ss_pred CCCcccCccCCEEecCCCccCCcCH
Confidence 775321 367889999887653
No 22
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.3e-35 Score=309.07 Aligned_cols=184 Identities=18% Similarity=0.254 Sum_probs=148.3
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEeCC------CcEEEEEEecccccC--HHHHHHHHHHHhcCCC-CCccce
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFK--KESYMMELDLFSRVSH-ARLVPL 572 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H-~niv~l 572 (693)
+...+++-..++|...+.||+|+||+||+|++.+ ++.||||++...... .++|.+|+++|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3344454455678888999999999999998642 468999999764433 4679999999999965 899999
Q ss_pred eEEEEcCCCeeEEEEccCCCCChhhhhhccCCC--------CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecC
Q 035786 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDL--------EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRD 644 (693)
Q Consensus 573 ~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~--------~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrD 644 (693)
+|+|.+.++..++|||||++|+|.++|+..... .......++|.+++.|+.|||+||+|||+. +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 999986555689999999999999999853210 011234599999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCceEECCcccccccCCCCc-ceeeeeehhhhhhh
Q 035786 645 VQASSILLDDKFEVRLGSLSELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 645 lk~~NILld~~~~~ki~Dfgla~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
|||+|||+++++.+||+|||+||.+..... ...+..+||+.|||
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymA 255 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 255 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCC
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccC
Confidence 999999999999999999999998744332 23445778888887
No 23
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-34 Score=296.91 Aligned_cols=161 Identities=18% Similarity=0.295 Sum_probs=136.4
Q ss_pred ccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC---CCeeEEEEc
Q 035786 516 ETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH---ETEKLLVYK 588 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---~~~~~lv~e 588 (693)
..+.||+|+||+||+|... ++..||||++...... .+.|.+|+++|++++|||||+++++|.+. +...+||||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 3457999999999999974 5889999999654332 46799999999999999999999988542 234789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCceEECCccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSELH 667 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgla~ 667 (693)
||++|+|.+++++. ..+++.....|+.||+.||+|||++ .|+||||||||+||||+ +++.+||+|||+|+
T Consensus 110 y~~gg~L~~~l~~~--------~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 110 LMTSGTLKTYLKRF--------KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp CCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred CCCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999864 2489999999999999999999986 34699999999999998 47999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
...... .+..+||+.|||
T Consensus 181 ~~~~~~---~~~~~GTp~YmA 198 (290)
T 3fpq_A 181 LKRASF---AKAVIGTPEFMA 198 (290)
T ss_dssp GCCTTS---BEESCSSCCCCC
T ss_pred eCCCCc---cCCcccCccccC
Confidence 764332 345789999987
No 24
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.5e-32 Score=315.16 Aligned_cols=321 Identities=16% Similarity=0.112 Sum_probs=272.8
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS 142 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~ 142 (693)
.++.++|++... ..+++ ..+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|++++
T Consensus 34 ~l~~L~Ls~n~i---~~~~~----~~~~~l~~L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 105 (606)
T 3t6q_A 34 STECLEFSFNVL---PTIQN----TTFSRLINLTFLDLTRCQIYWIHEDTFQ-SQHRLDTLVLTANPLIFMAETALSGPK 105 (606)
T ss_dssp TCCEEECTTCCC---SEECT----TTSTTCTTCSEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCSEECTTTTSSCT
T ss_pred cCcEEEccCCcc---CcCCh----hHhccCccceEEECCCCccceeChhhcc-CccccCeeeCCCCcccccChhhhcccc
Confidence 577888887543 22322 3678999999999999999988888886 499999999999999999999999999
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCC--EEE
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQ--FLN 220 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~--~L~ 220 (693)
+|++|+|++|.+++..|..++++++|++|+|++|.+++..+..+..+++|++|++++|.+++..|..++.+++|+ .|+
T Consensus 106 ~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~ 185 (606)
T 3t6q_A 106 ALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLN 185 (606)
T ss_dssp TCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEE
T ss_pred cccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEe
Confidence 999999999999987788899999999999999999974434455599999999999999988888899999999 899
Q ss_pred ccCCcccccCCccccCC---------------------------------------------------CCCCEEEccCCc
Q 035786 221 LSDNALTGFIPSEVGNL---------------------------------------------------DKLIELDLSKNS 249 (693)
Q Consensus 221 Ls~N~l~g~~p~~~~~l---------------------------------------------------~~L~~L~Ls~N~ 249 (693)
+++|++++..|..+... .+|+.|++++|.
T Consensus 186 l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~ 265 (606)
T 3t6q_A 186 LNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHY 265 (606)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCC
T ss_pred cCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCc
Confidence 99999998877665432 167888889999
Q ss_pred CcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 250 ISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 250 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
+++..+..|..+++|++|++++|.++ .+|.. +..+++|++|++++|++++..|..+..+++|+.|++++|++.+.+|.
T Consensus 266 l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~-l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 343 (606)
T 3t6q_A 266 FFNISSNTFHCFSGLQELDLTATHLS-ELPSG-LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT 343 (606)
T ss_dssp CSSCCTTTTTTCTTCSEEECTTSCCS-CCCSS-CCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS
T ss_pred cCccCHHHhccccCCCEEeccCCccC-CCChh-hcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch
Confidence 98888888999999999999999998 67776 47889999999999999988888999999999999999999998887
Q ss_pred cCcCCCCCCcEEEccCCccceec--CC--CCCCCCCEEEccCCcceeecCCCcC-----cccccCCCcCCCCc
Q 035786 330 LSTNGNASGAVFNISNNMLYGDL--NS--SSFRKFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSVA 393 (693)
Q Consensus 330 ~~~~~~~~l~~l~ls~N~l~g~~--~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~~ 393 (693)
..+..+..|+.|++++|.+.+.. +. ..+++|+.|++++|.+++..|..+. +.+++++|.+.+..
T Consensus 344 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 416 (606)
T 3t6q_A 344 GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKD 416 (606)
T ss_dssp STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCT
T ss_pred hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcc
Confidence 77788899999999999998765 33 6778999999999999988887664 35778888776653
No 25
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.7e-34 Score=298.20 Aligned_cols=165 Identities=19% Similarity=0.282 Sum_probs=144.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+ ++..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-DEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 3578889999999999999986 579999999997532 235679999999999999999999998865 5689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
||||++|+|.+++++.. .++..+...|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+|
T Consensus 111 mEy~~gG~L~~~i~~~~--------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla 179 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG--------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTA 179 (311)
T ss_dssp ECCCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCCHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCc
Confidence 99999999999997643 488999999999999999999998 9999999999999999999999999999
Q ss_pred cccCC-CCcceeeeeehhhhhhh
Q 035786 667 HAQGD-SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~-~~~~~~~~~~~~~~y~a 688 (693)
+.+.. ........++||++|||
T Consensus 180 ~~~~~~~~~~~~~~~~GTp~YmA 202 (311)
T 4aw0_A 180 KVLSPESKQARANSFVGTAQYVS 202 (311)
T ss_dssp EECCTTTTCCCBCCCCSCGGGCC
T ss_pred eecCCCCCcccccCcccCcccCC
Confidence 98743 33334556899999997
No 26
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.5e-33 Score=311.87 Aligned_cols=290 Identities=19% Similarity=0.178 Sum_probs=154.6
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCc-cCccccCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAG-NVPATLGELK 166 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~ 166 (693)
.+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.++ .+|.. .+++|++|+|++|.+++ .+|..|++++
T Consensus 40 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~ 115 (520)
T 2z7x_B 40 DILSLSKLRILIISHNRIQYLDISVFK-FNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMS 115 (520)
T ss_dssp HHTTCTTCCEEECCSSCCCEEEGGGGT-TCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCT
T ss_pred hccccccccEEecCCCccCCcChHHhh-cccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCC
Confidence 455566666666666666655555554 3666666666666665 34443 56666666666666655 3555666666
Q ss_pred CCCEEEccCCCCCCcCchhhhcCcCC--CeeecccccC--CCcCcccccCCC----------------------------
Q 035786 167 KLSNLDLSRNLLTGEIPNAISLLGNL--TRLNLASNFF--TGQIPSGLYSLS---------------------------- 214 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~g~~p~~~~~l~---------------------------- 214 (693)
+|++|+|++|.+++ ..+..+++| +.|++++|.+ .+..|..+..+.
T Consensus 116 ~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L 192 (520)
T 2z7x_B 116 QLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANL 192 (520)
T ss_dssp TCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEE
T ss_pred cceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccce
Confidence 66666666666654 234455555 6666666666 445554444422
Q ss_pred -------------------------------------------------------CCCEEEccCCcccccCCccc-----
Q 035786 215 -------------------------------------------------------SIQFLNLSDNALTGFIPSEV----- 234 (693)
Q Consensus 215 -------------------------------------------------------~L~~L~Ls~N~l~g~~p~~~----- 234 (693)
+|+.|++++|+++|.+|..+
T Consensus 193 ~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~ 272 (520)
T 2z7x_B 193 ELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSG 272 (520)
T ss_dssp EECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCS
T ss_pred eeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhccc
Confidence 44444555555555555544
Q ss_pred cCCCCCCEEEccCCcCcccCc-hhhhcC---ccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCC
Q 035786 235 GNLDKLIELDLSKNSISGSLP-LELRGL---RNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310 (693)
Q Consensus 235 ~~l~~L~~L~Ls~N~l~g~~p-~~~~~l---~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~ 310 (693)
+++++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|..+..+
T Consensus 273 ~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 347 (520)
T 2z7x_B 273 TSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML---CPSKISPFLHLDFSNNLLTDTVFENCGHL 347 (520)
T ss_dssp CCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCCC
T ss_pred ccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc---chhhCCcccEEEeECCccChhhhhhhccC
Confidence 4444444444444444 222 222111 22333333333222110 01345566666666666666666666666
Q ss_pred CCCCEEEccCCcCcc--cCCccCcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCCcceeecCCCcC---ccc
Q 035786 311 PNLRFLDLSRNNITG--SWPILSTNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSNYFQGTVADDRG---RNV 382 (693)
Q Consensus 311 ~~L~~L~Ls~N~l~g--~~p~~~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~l~g~ip~~~~---~~~ 382 (693)
++|++|+|++|++++ .+|. .+..+++|+.|++++|.+.+.+|. ..+++|+.|++++|.+++.+|..+. +.+
T Consensus 348 ~~L~~L~L~~N~l~~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L 426 (520)
T 2z7x_B 348 TELETLILQMNQLKELSKIAE-MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVL 426 (520)
T ss_dssp SSCCEEECCSSCCCBHHHHHH-HHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEE
T ss_pred CCCCEEEccCCccCccccchH-HHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEE
Confidence 666666666666664 3332 234556666666666666654443 3345566666666666666555443 245
Q ss_pred ccCCCcCC
Q 035786 383 SLGRNCLQ 390 (693)
Q Consensus 383 ~l~~n~l~ 390 (693)
++++|.+.
T Consensus 427 ~Ls~N~l~ 434 (520)
T 2z7x_B 427 DLHSNKIK 434 (520)
T ss_dssp ECCSSCCC
T ss_pred ECCCCccc
Confidence 56666555
No 27
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=307.66 Aligned_cols=163 Identities=20% Similarity=0.299 Sum_probs=143.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|+++|++++|||||+++++|.+ ++..||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-CCEEEEEEeC
Confidence 4577788999999999999996 46999999999764433 5679999999999999999999999876 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|++|+|.++++. ..+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+.+
T Consensus 230 ~~gG~L~~~i~~---------~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~ 297 (423)
T 4fie_A 230 LEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 297 (423)
T ss_dssp CTTEEHHHHHHH---------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEEC
T ss_pred CCCCcHHHHHhc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceEC
Confidence 999999999974 2389999999999999999999998 9999999999999999999999999999987
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .+.++||++|||
T Consensus 298 ~~~~~~-~~~~~GTp~YmA 315 (423)
T 4fie_A 298 SKEVPR-RKSLVGTPYWMA 315 (423)
T ss_dssp CSSCCC-BCCCEECTTTCC
T ss_pred CCCCcc-ccccccCcCcCC
Confidence 544332 456889999997
No 28
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-33 Score=308.67 Aligned_cols=312 Identities=22% Similarity=0.185 Sum_probs=276.6
Q ss_pred CCcceeecCC-----------CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCcc
Q 035786 53 SWRGVQCQNG-----------QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQ 121 (693)
Q Consensus 53 ~W~gv~C~~~-----------~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~ 121 (693)
.|..|.|... .++.|+|++... ..+++ ..+.++++|++|++++|.+.+..|..|. .+++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l---~~~~~----~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~ 83 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRI---KTLNQ----DEFASFPHLEELELNENIVSAVEPGAFN-NLFNLR 83 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCC---CEECT----TTTTTCTTCCEEECTTSCCCEECTTTTT-TCTTCC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCcc---ceECH----hHccCCCCCCEEECCCCccCEeChhhhh-CCccCC
Confidence 5788999632 456777776432 22322 3678999999999999999988888886 499999
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
+|+|++|.+++..+..|+++++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|..+++|+.|++++|.
T Consensus 84 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 84 TLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp EEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred EEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCc
Confidence 99999999998777789999999999999999999999999999999999999999999889999999999999999999
Q ss_pred CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCc
Q 035786 202 FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 202 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
+++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+.+|.......+|++|++++|+++ .+|..
T Consensus 164 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~ 242 (477)
T 2id5_A 164 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYL 242 (477)
T ss_dssp CSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHH
T ss_pred CcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHH
Confidence 99877778999999999999999999998889999999999999999998888888877889999999999998 56766
Q ss_pred ccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCC
Q 035786 282 LFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRK 359 (693)
Q Consensus 282 ~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~ 359 (693)
.|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..| ..+..+++|+.|++++|++++..+. ..+++
T Consensus 243 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 321 (477)
T 2id5_A 243 AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP-YAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN 321 (477)
T ss_dssp HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECT-TTBTTCTTCCEEECCSSCCSCCCGGGBSCGGG
T ss_pred HhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECH-HHhcCcccCCEEECCCCcCceeCHhHcCCCcc
Confidence 67899999999999999999888899999999999999999998777 4667889999999999999875543 45678
Q ss_pred CCEEEccCCcceeec
Q 035786 360 FSLIDLSSNYFQGTV 374 (693)
Q Consensus 360 l~~ldLs~N~l~g~i 374 (693)
|+.|+|++|++++..
T Consensus 322 L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 322 LETLILDSNPLACDC 336 (477)
T ss_dssp CCEEECCSSCEECSG
T ss_pred cCEEEccCCCccCcc
Confidence 999999999998754
No 29
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=326.11 Aligned_cols=305 Identities=24% Similarity=0.261 Sum_probs=166.6
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcc--cCCCccCCEEecccCcCCccCc-cccCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGS--FGNLSRLNVLYLSGNSLAGNVP-ATLGE 164 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 164 (693)
.+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..|++
T Consensus 68 ~f~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~ 146 (844)
T 3j0a_A 68 AFRNLPNLRILDLGSSKIYFLHPDAFQ-GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGK 146 (844)
T ss_dssp TTSSCTTCCEEECTTCCCCEECTTSSC-SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGT
T ss_pred HhcCCCCCCEEECCCCcCcccCHhHcc-CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhh
Confidence 456666666666666666666566554 3666666666666666655443 6666666666666666665443 35666
Q ss_pred CCCCCEEEccCCCCCCcCchhhhcC--cC------------------------------CCeeeccccc-----------
Q 035786 165 LKKLSNLDLSRNLLTGEIPNAISLL--GN------------------------------LTRLNLASNF----------- 201 (693)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~~~~l--~~------------------------------L~~L~Ls~N~----------- 201 (693)
+++|++|+|++|.+++..|..+..+ ++ |+.|++++|.
T Consensus 147 L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 226 (844)
T 3j0a_A 147 LNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSN 226 (844)
T ss_dssp CSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGG
T ss_pred CCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHh
Confidence 6666666666666655544443322 12 2233333332
Q ss_pred ---------------------------------------------------CCCcCcccccCCCCCCEEEccCCcccccC
Q 035786 202 ---------------------------------------------------FTGQIPSGLYSLSSIQFLNLSDNALTGFI 230 (693)
Q Consensus 202 ---------------------------------------------------l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 230 (693)
+++..|..+..+++|+.|+|++|++++..
T Consensus 227 ~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 306 (844)
T 3j0a_A 227 AISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIA 306 (844)
T ss_dssp TSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEEC
T ss_pred hcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCC
Confidence 22222233333444444444444444444
Q ss_pred CccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcC-------
Q 035786 231 PSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL------- 303 (693)
Q Consensus 231 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~------- 303 (693)
|..|..+++|++|+|++|.+++..|..|.++++|++|++++|.+++ ++...|..+++|+.|++++|.+++..
T Consensus 307 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~ 385 (844)
T 3j0a_A 307 DEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAI-IQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPD 385 (844)
T ss_dssp TTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCC-CCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSE
T ss_pred hHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCc-cChhhhcCCCCCCEEECCCCCCCcccCCCCcch
Confidence 4444444555555555555544444445555555555555554432 22233444555555555555544310
Q ss_pred -----------c----------------------ccccCCCCCCEEEccCCcCcccCCc---------------------
Q 035786 304 -----------P----------------------ATLFLRPNLRFLDLSRNNITGSWPI--------------------- 329 (693)
Q Consensus 304 -----------p----------------------~~l~~~~~L~~L~Ls~N~l~g~~p~--------------------- 329 (693)
| ..+..+++|+.|+|++|++++..+.
T Consensus 386 L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~ 465 (844)
T 3j0a_A 386 IFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQL 465 (844)
T ss_dssp EEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSS
T ss_pred hccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccc
Confidence 0 0112344555555555555432111
Q ss_pred --------cCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC---cccccCCCcCCCCcc
Q 035786 330 --------LSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG---RNVSLGRNCLQSVAS 394 (693)
Q Consensus 330 --------~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~---~~~~l~~n~l~g~~~ 394 (693)
..+..++.|+.|+|++|++++.+|. ..+++|+.|||++|++++-.|..+. +.+++++|.+.+.++
T Consensus 466 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~ 543 (844)
T 3j0a_A 466 AWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNP 543 (844)
T ss_dssp SCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCS
T ss_pred ccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCCh
Confidence 1233456788889999998877665 5678888999999988876555443 356778888877654
No 30
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.5e-32 Score=310.58 Aligned_cols=319 Identities=19% Similarity=0.178 Sum_probs=220.0
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS 142 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~ 142 (693)
+.+.++|++... ..+.| ..+.++++|++|++++|.+.+..|..++ .+++|++|+|++|.+++..|..|++++
T Consensus 58 ~L~~L~Ls~n~i---~~~~~----~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~l~~~~~~~l~ 129 (606)
T 3t6q_A 58 NLTFLDLTRCQI---YWIHE----DTFQSQHRLDTLVLTANPLIFMAETALS-GPKALKHLFFIQTGISSIDFIPLHNQK 129 (606)
T ss_dssp TCSEEECTTCCC---CEECT----TTTTTCTTCCEEECTTCCCSEECTTTTS-SCTTCCEEECTTSCCSCGGGSCCTTCT
T ss_pred cceEEECCCCcc---ceeCh----hhccCccccCeeeCCCCcccccChhhhc-ccccccEeeccccCcccCCcchhccCC
Confidence 567778876432 22222 3678899999999999999888888876 499999999999999887778889999
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCC--eeecccccCCCcCcc------------
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT--RLNLASNFFTGQIPS------------ 208 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--~L~Ls~N~l~g~~p~------------ 208 (693)
+|++|+|++|.+.+..++.+..+++|++|++++|.+++..|..+..+++|+ .|++++|.+++..|.
T Consensus 130 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l 209 (606)
T 3t6q_A 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNF 209 (606)
T ss_dssp TCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEEC
T ss_pred cccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhcccccccc
Confidence 999999999999875444455588999999999998887788888888877 677777776654443
Q ss_pred ---------------------------------------------------------------cccCCCCCCEEEccCCc
Q 035786 209 ---------------------------------------------------------------GLYSLSSIQFLNLSDNA 225 (693)
Q Consensus 209 ---------------------------------------------------------------~~~~l~~L~~L~Ls~N~ 225 (693)
.+..+++|++|++++|+
T Consensus 210 ~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 289 (606)
T 3t6q_A 210 GGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATH 289 (606)
T ss_dssp TTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSC
T ss_pred CCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCc
Confidence 24455666666666666
Q ss_pred ccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcC--
Q 035786 226 LTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL-- 303 (693)
Q Consensus 226 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~-- 303 (693)
++ .+|..+.++++|++|++++|.+++..|..+.++++|++|++++|.+.+.++...+..+++|+.|++++|.+++..
T Consensus 290 l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 368 (606)
T 3t6q_A 290 LS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCC 368 (606)
T ss_dssp CS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEES
T ss_pred cC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCc
Confidence 66 456666666666666666666666666666666666666666666666666655566666666666666666554
Q ss_pred cccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCCcceeecCCCcC-
Q 035786 304 PATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSNYFQGTVADDRG- 379 (693)
Q Consensus 304 p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~l~g~ip~~~~- 379 (693)
|..+..+++|+.|++++|++++..| ..+..+++|+.|++++|.+.+..+. ..+++|+.|++++|.+++..|..+.
T Consensus 369 ~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 447 (606)
T 3t6q_A 369 NLQLRNLSHLQSLNLSYNEPLSLKT-EAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDG 447 (606)
T ss_dssp TTTTTTCTTCCEEECCSCSCEEECT-TTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTT
T ss_pred chhcccCCCCCEEECCCCcCCcCCH-HHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhC
Confidence 5566666666666666666665544 2445566666666666666655443 3455666666666666666555443
Q ss_pred ----cccccCCCcCCC
Q 035786 380 ----RNVSLGRNCLQS 391 (693)
Q Consensus 380 ----~~~~l~~n~l~g 391 (693)
+.+.+++|.+.+
T Consensus 448 l~~L~~L~L~~n~l~~ 463 (606)
T 3t6q_A 448 LPALQHLNLQGNHFPK 463 (606)
T ss_dssp CTTCCEEECTTCBCGG
T ss_pred CCCCCEEECCCCCCCc
Confidence 245556665544
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=308.43 Aligned_cols=290 Identities=19% Similarity=0.214 Sum_probs=210.7
Q ss_pred cccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCc-CCCcccCCCccCCEEecccCcCCccCccccCCC
Q 035786 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSG-SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGEL 165 (693)
Q Consensus 87 ~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 165 (693)
..+.++++|++|++++|.+. .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++ ..+..+
T Consensus 63 ~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l 135 (520)
T 2z7x_B 63 SVFKFNQELEYLDLSHNKLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPI 135 (520)
T ss_dssp GGGTTCTTCCEEECCSSCCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGG
T ss_pred HHhhcccCCCEEecCCCcee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhcccc
Confidence 46889999999999999998 68876 49999999999999998 589999999999999999999986 356667
Q ss_pred CCC--CEEEccCCCC--CCcCchhhhcCc---------------------------------------------------
Q 035786 166 KKL--SNLDLSRNLL--TGEIPNAISLLG--------------------------------------------------- 190 (693)
Q Consensus 166 ~~L--~~L~Ls~N~l--~~~~p~~~~~l~--------------------------------------------------- 190 (693)
++| ++|++++|.+ ++..|..+..+.
T Consensus 136 ~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~ 215 (520)
T 2z7x_B 136 AHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAK 215 (520)
T ss_dssp TTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHG
T ss_pred ccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhh
Confidence 777 8888888888 666666555432
Q ss_pred --------------------------------CCCeeecccccCCCcCcccc-----cCCCCCCEEEccCCcccccCCc-
Q 035786 191 --------------------------------NLTRLNLASNFFTGQIPSGL-----YSLSSIQFLNLSDNALTGFIPS- 232 (693)
Q Consensus 191 --------------------------------~L~~L~Ls~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g~~p~- 232 (693)
+|++|++++|.++|.+|..+ ..+++|+.+++++|.+ .+|.
T Consensus 216 l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~ 293 (520)
T 2z7x_B 216 LQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQS 293 (520)
T ss_dssp GGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTH
T ss_pred hccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchh
Confidence 68888888888888888877 5555555555555544 2220
Q ss_pred ------------------------c-ccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc--cCCCcccCC
Q 035786 233 ------------------------E-VGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG--QLSEGLFPT 285 (693)
Q Consensus 233 ------------------------~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~i~~~~~~~ 285 (693)
. +..+++|++|++++|++++.+|..+.++++|++|++++|++++ .+|.. +..
T Consensus 294 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~-~~~ 372 (520)
T 2z7x_B 294 YIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEM-TTQ 372 (520)
T ss_dssp HHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHH-HTT
T ss_pred hhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHH-Hhh
Confidence 0 1566777777777777777777777777777777777777765 33332 466
Q ss_pred CCCCCEEEccCCcCCCcCccc-ccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCE
Q 035786 286 LDQLQVVDLSGNKLDGALPAT-LFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSL 362 (693)
Q Consensus 286 l~~L~~L~Ls~N~l~g~~p~~-l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ 362 (693)
+++|++|++++|++++.+|.. +..+++|+.|++++|++++.+|... ...|+.|++++|+++ .+|. ..+++|+.
T Consensus 373 l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l---~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~ 448 (520)
T 2z7x_B 373 MKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL---PPRIKVLDLHSNKIK-SIPKQVVKLEALQE 448 (520)
T ss_dssp CTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSC---CTTCCEEECCSSCCC-CCCGGGGGCTTCCE
T ss_pred CCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhh---cccCCEEECCCCccc-ccchhhhcCCCCCE
Confidence 777777777777777755543 5667777777777777777666422 156777777777777 4554 45667777
Q ss_pred EEccCCcceeecCCC-cC-----cccccCCCcCCC
Q 035786 363 IDLSSNYFQGTVADD-RG-----RNVSLGRNCLQS 391 (693)
Q Consensus 363 ldLs~N~l~g~ip~~-~~-----~~~~l~~n~l~g 391 (693)
|||++|+++ .+|.. +. ..+++++|.+.+
T Consensus 449 L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 449 LNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp EECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred EECCCCcCC-ccCHHHhccCCcccEEECcCCCCcc
Confidence 777777777 46654 32 245666666554
No 32
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.3e-32 Score=309.68 Aligned_cols=138 Identities=21% Similarity=0.132 Sum_probs=101.0
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..|..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDIS-FLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTT-TCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChhhhc-cCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 5777888888887776666665 4888888888888888777777888888888888888887 45655 778888888
Q ss_pred ccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCcccccCCCCC--CEEEccCCcc--cccCCccccCC
Q 035786 173 LSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI--QFLNLSDNAL--TGFIPSEVGNL 237 (693)
Q Consensus 173 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--~~L~Ls~N~l--~g~~p~~~~~l 237 (693)
|++|.+++ .+|..++++++|++|++++|.+++. .+..+++| +.|++++|++ ++..|..+..+
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l 194 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIP 194 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEEC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCccccccc
Confidence 88888876 4567788888888888888877653 34444444 7777777777 66666555543
No 33
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.1e-34 Score=294.92 Aligned_cols=168 Identities=20% Similarity=0.322 Sum_probs=131.2
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCC--------
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHET-------- 581 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-------- 581 (693)
+|+..+.||+|+||+||+|+. .+|+.||||++.....+ .+.|.+|+++|++++|||||++++++.+.+.
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 477889999999999999996 47999999999754332 4679999999999999999999998865322
Q ss_pred ---eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 582 ---EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 582 ---~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
..|+|||||++|+|.++++.... ....++.....|+.||+.||+|||+. +||||||||+|||+++++.+
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~-----~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCT-----IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCS-----GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCC-----CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 26899999999999999986432 12367888889999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCc-----------ceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQ-----------NVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~-----------~~~~~~~~~~~y~a 688 (693)
||+|||+|+....... ...+..+||++|||
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmA 198 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS 198 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSC
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccC
Confidence 9999999998733211 12345689999987
No 34
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.2e-32 Score=308.76 Aligned_cols=310 Identities=21% Similarity=0.222 Sum_probs=234.0
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.++|++... ..+++ ..+.++++|++|++++|.+.+..|..|. .+++|++|||++|.++ .+|.. .+
T Consensus 52 ~~L~~L~Ls~N~i---~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~-~lp~~--~l 120 (562)
T 3a79_B 52 PRTKALSLSQNSI---SELRM----PDISFLSELRVLRLSHNRIRSLDFHVFL-FNQDLEYLDVSHNRLQ-NISCC--PM 120 (562)
T ss_dssp TTCCEEECCSSCC---CCCCG----GGTTTCTTCCEEECCSCCCCEECTTTTT-TCTTCCEEECTTSCCC-EECSC--CC
T ss_pred CCcCEEECCCCCc---cccCh----hhhccCCCccEEECCCCCCCcCCHHHhC-CCCCCCEEECCCCcCC-ccCcc--cc
Confidence 3567777776432 22322 4678899999999999999987788776 4999999999999998 56666 89
Q ss_pred ccCCEEecccCcCCc-cCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCC--CeeecccccC--CCcCcccccCCC--
Q 035786 142 SRLNVLYLSGNSLAG-NVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNL--TRLNLASNFF--TGQIPSGLYSLS-- 214 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~g~~p~~~~~l~-- 214 (693)
++|++|+|++|++++ .+|..|+++++|++|+|++|.+++. .+..+++| +.|++++|.+ ++..|..+..+.
T Consensus 121 ~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~ 197 (562)
T 3a79_B 121 ASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTT 197 (562)
T ss_dssp TTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEE
T ss_pred ccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcc
Confidence 999999999999987 4578899999999999999998753 34444555 7788887777 665555554433
Q ss_pred -------------------------------------------------------------------------------C
Q 035786 215 -------------------------------------------------------------------------------S 215 (693)
Q Consensus 215 -------------------------------------------------------------------------------~ 215 (693)
+
T Consensus 198 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~ 277 (562)
T 3a79_B 198 VLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRP 277 (562)
T ss_dssp EEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSS
T ss_pred eEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhccc
Confidence 5
Q ss_pred CCEEEccCCcccccCCccc-----------------------------------------------------cCCCCCCE
Q 035786 216 IQFLNLSDNALTGFIPSEV-----------------------------------------------------GNLDKLIE 242 (693)
Q Consensus 216 L~~L~Ls~N~l~g~~p~~~-----------------------------------------------------~~l~~L~~ 242 (693)
|++|++++|+++|.+|..+ ..+++|++
T Consensus 278 L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~ 357 (562)
T 3a79_B 278 VEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTF 357 (562)
T ss_dssp EEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCE
T ss_pred ccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceE
Confidence 6667777777777666654 66788888
Q ss_pred EEccCCcCcccCchhhhcCcccccccccccccccc--CCCcccCCCCCCCEEEccCCcCCCcCcc-cccCCCCCCEEEcc
Q 035786 243 LDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ--LSEGLFPTLDQLQVVDLSGNKLDGALPA-TLFLRPNLRFLDLS 319 (693)
Q Consensus 243 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--i~~~~~~~l~~L~~L~Ls~N~l~g~~p~-~l~~~~~L~~L~Ls 319 (693)
|++++|++++.+|..+.++++|++|++++|++++. +| ..|..+++|+.|++++|++++.+|. .+..+++|+.|+++
T Consensus 358 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVA-LMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHH-HTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EECCCCccccchhhhhcccCCCCEEECCCCCcCCcccch-hhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 88888888888888888888888888888888752 22 2357788888888888888885554 46677888888888
Q ss_pred CCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCC-cC-----cccccCCCcCCC
Q 035786 320 RNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADD-RG-----RNVSLGRNCLQS 391 (693)
Q Consensus 320 ~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~-~~-----~~~~l~~n~l~g 391 (693)
+|++++.+|... ...|+.|++++|+++ .+|. ..+++|+.|||++|+++ .+|.. +. +.+++++|.+.+
T Consensus 437 ~n~l~~~~~~~l---~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 437 SNMLTGSVFRCL---PPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp SSCCCGGGGSSC---CTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CCCCCcchhhhh---cCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCC
Confidence 888887776422 167888888888887 4554 45678888888888888 56665 32 246677776654
No 35
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.6e-33 Score=295.87 Aligned_cols=161 Identities=22% Similarity=0.234 Sum_probs=135.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+.|...+.||+|+||+||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+ ++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVRE-GPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEE-TTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEecc
Confidence 3466677899999999999996 4699999999975433 2469999999999999999999876 46899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceEECCccccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVRLGSLSELHAQ 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~ki~Dfgla~~~ 669 (693)
++|+|.++|+... .+++.+...|+.||+.||+|||+. +||||||||+||||+.++ .+||+|||+|+.+
T Consensus 133 ~gg~L~~~l~~~~--------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp TTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred CCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 9999999997642 499999999999999999999998 999999999999999987 6999999999987
Q ss_pred CCCCc----ceeeeeehhhhhhh
Q 035786 670 GDSHQ----NVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~----~~~~~~~~~~~y~a 688 (693)
..... .....++||++|||
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmA 224 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMA 224 (336)
T ss_dssp ------------CCCCCCGGGCC
T ss_pred cCCCcccceecCCccccCccccC
Confidence 43211 11334689999997
No 36
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.4e-33 Score=285.85 Aligned_cols=162 Identities=17% Similarity=0.283 Sum_probs=128.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||+||+|+. .+|+.||||++..... ..+.|.+|++++++++|||||++++++.+ ++..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEE
Confidence 5688889999999999999996 5699999999975332 24679999999999999999999998865 5789999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+ +|+|.+++... ..+++.+...++.|++.||+|||++ +||||||||+|||+++++.+||+|||+|
T Consensus 92 mEy~-~g~L~~~l~~~--------~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla 159 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR--------DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 159 (275)
T ss_dssp EECC-CEEHHHHHHHS--------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC
T ss_pred EeCC-CCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCC
Confidence 9999 68999999753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...+... .+..+||++|||
T Consensus 160 ~~~~~~~~--~~~~~GT~~Y~A 179 (275)
T 3hyh_A 160 NIMTDGNF--LKTSCGSPNYAA 179 (275)
T ss_dssp -----------------CTTSC
T ss_pred eecCCCCc--cCCeeECcccCC
Confidence 98744332 445789999987
No 37
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=319.60 Aligned_cols=310 Identities=23% Similarity=0.233 Sum_probs=231.4
Q ss_pred CCcceeecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcC-chHhhhCCCCccEEEecCCCCC
Q 035786 53 SWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSI-PEWFGYRLPALQVLDLRSCSLS 131 (693)
Q Consensus 53 ~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~i-p~~~~~~l~~L~~L~Ls~n~l~ 131 (693)
.|..|.+-..+++.|+|++... ..+.+ ..+.++++|++|++++|.+.+.+ |..|. ++++|++|+|++|.++
T Consensus 15 ~L~~vP~lp~~l~~LdLs~N~i---~~i~~----~~~~~l~~L~~LdLs~n~~~~~i~~~~f~-~L~~L~~L~Ls~N~l~ 86 (844)
T 3j0a_A 15 NLTQVPQVLNTTERLLLSFNYI---RTVTA----SSFPFLEQLQLLELGSQYTPLTIDKEAFR-NLPNLRILDLGSSKIY 86 (844)
T ss_dssp CSSCCCSSCTTCCEEEEESCCC---CEECS----SSCSSCCSCSEEEECTTCCCCEECTTTTS-SCTTCCEEECTTCCCC
T ss_pred CCCCCCCCCCCcCEEECCCCcC---CccCh----hHCcccccCeEEeCCCCCCccccCHHHhc-CCCCCCEEECCCCcCc
Confidence 5777777446788999987542 22322 36889999999999999888888 55565 6999999999999999
Q ss_pred cCCCcccCCCccCCEEecccCcCCccCccc--cCCCCCCCEEEccCCCCCCcCc-hhhhcCcCCCeeecccccCCCcCcc
Q 035786 132 GSIPGSFGNLSRLNVLYLSGNSLAGNVPAT--LGELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPS 208 (693)
Q Consensus 132 g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~ 208 (693)
+..|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..| ..++++++|++|+|++|.+++..|.
T Consensus 87 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 87 FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred ccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 999999999999999999999999877765 9999999999999999998755 6899999999999999999988888
Q ss_pred cccCC--CCCCEEEccCCcccccCCccccCCCC------CCEEEccCCcCcccCchhhhc--------------------
Q 035786 209 GLYSL--SSIQFLNLSDNALTGFIPSEVGNLDK------LIELDLSKNSISGSLPLELRG-------------------- 260 (693)
Q Consensus 209 ~~~~l--~~L~~L~Ls~N~l~g~~p~~~~~l~~------L~~L~Ls~N~l~g~~p~~~~~-------------------- 260 (693)
.+..+ ++|+.|++++|.+++..|..++.+.+ |+.|++++|.+++.+|..+..
T Consensus 167 ~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~ 246 (844)
T 3j0a_A 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246 (844)
T ss_dssp GGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCS
T ss_pred HcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccc
Confidence 88776 77888888888887777766665554 777777777666555544332
Q ss_pred ------------------CccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCc
Q 035786 261 ------------------LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNN 322 (693)
Q Consensus 261 ------------------l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~ 322 (693)
.++|+.|++++|.+.+..+ ..|..+++|+.|+|++|++++..|..+..+++|++|+|++|+
T Consensus 247 ~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~ 325 (844)
T 3j0a_A 247 FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS-RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNL 325 (844)
T ss_dssp SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS-CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCC
T ss_pred ccccccCCCChhhhhccccCCccEEECCCCcccccCh-hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCC
Confidence 1456667777776664433 335666677777777777766666666666777777777777
Q ss_pred CcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCccee
Q 035786 323 ITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 323 l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g 372 (693)
+++..| ..+..++.|+.|++++|++.+..+. ..+++|+.|+|++|.+++
T Consensus 326 l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 326 LGELYS-SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CSCCCS-CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCccCH-HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 665444 3445566666777777666544332 345566666666666654
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.1e-32 Score=309.52 Aligned_cols=284 Identities=23% Similarity=0.210 Sum_probs=171.4
Q ss_pred cccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCC
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 168 (693)
+.+++.|++|++++|.+.+..|..|+ .+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L 149 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKL 149 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhc-CCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCC
Confidence 45566666666666666665555554 36666666666666666666666666666666666666665444445666666
Q ss_pred CEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCC
Q 035786 169 SNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248 (693)
Q Consensus 169 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 248 (693)
++|+|++|.+++..|..+..+++|++|++++|.+++.. +..+++|+.|++++|.+++ +....+|+.|++++|
T Consensus 150 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n 221 (597)
T 3oja_B 150 TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHN 221 (597)
T ss_dssp CEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSS
T ss_pred CEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCC
Confidence 66666666666666666666666666666666666432 3344555555555555543 122334555555555
Q ss_pred cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCC
Q 035786 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 249 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
.++...+. + .++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++ +|
T Consensus 222 ~l~~~~~~-~--~~~L~~L~L~~n~l~~~---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~ 294 (597)
T 3oja_B 222 SINVVRGP-V--NVELTILKLQHNNLTDT---AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LN 294 (597)
T ss_dssp CCCEEECS-C--CSCCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EE
T ss_pred cccccccc-c--CCCCCEEECCCCCCCCC---hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CC
Confidence 55432221 1 24666777777776652 234566777777777777777777777777777777777777765 33
Q ss_pred ccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC--cccccCCCcCC
Q 035786 329 ILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG--RNVSLGRNCLQ 390 (693)
Q Consensus 329 ~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~--~~~~l~~n~l~ 390 (693)
. ....++.|+.|+|++|.+.+ +|. ..+++|+.|+|++|.+++..+..+. ..+++++|.+.
T Consensus 295 ~-~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~ 358 (597)
T 3oja_B 295 L-YGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWD 358 (597)
T ss_dssp C-SSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEE
T ss_pred c-ccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCC
Confidence 2 33456667777777777763 332 3456677777777777654322222 24556666543
No 39
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.8e-34 Score=294.59 Aligned_cols=163 Identities=20% Similarity=0.229 Sum_probs=133.1
Q ss_pred CCCccCccccCCeeeEEEEEeC----CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||+||+|+.. .++.||||+++.... ....|.+|+++|++++|||||++++++.+ ++..|+
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~i 103 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-EGKLYL 103 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-TTEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEE
Confidence 4777889999999999999852 478999999975432 23468899999999999999999998875 578999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|||||++|+|.++|++.. .+++.+...|+.|++.||+|||+. +||||||||+|||+++++.+||+|||+
T Consensus 104 vmEy~~gg~L~~~l~~~~--------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 172 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGL 172 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEE
T ss_pred EEEcCCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccc
Confidence 999999999999997643 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+...+.... .+..+||++|||
T Consensus 173 a~~~~~~~~~-~~~~~GT~~YmA 194 (304)
T 3ubd_A 173 SKESIDHEKK-AYSFCGTVEYMA 194 (304)
T ss_dssp EEC-----CC-CCSCCCCGGGCC
T ss_pred ceeccCCCcc-ccccccCcccCC
Confidence 9976433322 345789999997
No 40
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.98 E-value=1.4e-31 Score=290.36 Aligned_cols=284 Identities=23% Similarity=0.196 Sum_probs=156.4
Q ss_pred ccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCC
Q 035786 90 GNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLS 169 (693)
Q Consensus 90 ~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 169 (693)
.++++|+.|++++|.+.+..|..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|.++++|+
T Consensus 66 ~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 66 DSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp HHCCCCSEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cccccCcEEECCCCcccccChhhcc-CCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 3444555555555544443333333 255555555555555544444455555555555555555433222344455555
Q ss_pred EEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCc
Q 035786 170 NLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS 249 (693)
Q Consensus 170 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 249 (693)
+|+|++|.+++..|..+..+++|++|++++|.+++. .+..+++|+.|++++|.+++ +...++|++|++++|.
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~ 216 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNS 216 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSC
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCe
Confidence 555555555444444455555555555555554432 12333444444444444332 1222345556666665
Q ss_pred CcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 250 ISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 250 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
++.. |.. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+++|+.|+|++|++++ +|.
T Consensus 217 l~~~-~~~--~~~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~ 289 (390)
T 3o6n_A 217 INVV-RGP--VNVELTILKLQHNNLTDT---AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNL 289 (390)
T ss_dssp CCEE-ECC--CCSSCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EEC
T ss_pred eeec-ccc--ccccccEEECCCCCCccc---HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCc
Confidence 5533 221 235777778888877753 234677788888888888887777777778888888888888775 342
Q ss_pred cCcCCCCCCcEEEccCCccceecCC-CCCCCCCEEEccCCcceeecCCCcC--cccccCCCcCC
Q 035786 330 LSTNGNASGAVFNISNNMLYGDLNS-SSFRKFSLIDLSSNYFQGTVADDRG--RNVSLGRNCLQ 390 (693)
Q Consensus 330 ~~~~~~~~l~~l~ls~N~l~g~~~~-~~~~~l~~ldLs~N~l~g~ip~~~~--~~~~l~~n~l~ 390 (693)
....++.|+.|++++|++.+..+. ..+++|+.|++++|.++..-...+. +.+++++|.+.
T Consensus 290 -~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 290 -YGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp -SSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEE
T ss_pred -ccCCCCCCCEEECCCCcceecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCcc
Confidence 335567788888888877643222 3456778888888877654222221 24566666543
No 41
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.98 E-value=3.1e-31 Score=308.55 Aligned_cols=302 Identities=25% Similarity=0.260 Sum_probs=231.1
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.++|++... ..+++ ..+.++++|++|++++|.+.+..|..+.. +++|++|+|++|.+++..+..|+++
T Consensus 25 ~~l~~L~Ls~n~l---~~~~~----~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l 96 (680)
T 1ziw_A 25 TNITVLNLTHNQL---RRLPA----ANFTRYSQLTSLDVGFNTISKLEPELCQK-LPMLKVLNLQHNELSQLSDKTFAFC 96 (680)
T ss_dssp TTCSEEECCSSCC---CCCCG----GGGGGGTTCSEEECCSSCCCCCCTTHHHH-CTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCcEEECCCCCC---CCcCH----HHHhCCCcCcEEECCCCccCccCHHHHhc-ccCcCEEECCCCccCccChhhhccC
Confidence 3678888887542 22332 35788999999999999999888888875 9999999999999997666689999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCccccc--CCCCCCEE
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY--SLSSIQFL 219 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L 219 (693)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..+..+++|++|++++|.+++..|..+. .+++|+.|
T Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 176 (680)
T 1ziw_A 97 TNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKL 176 (680)
T ss_dssp TTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEE
T ss_pred CCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEE
Confidence 9999999999999887778899999999999999999988888899999999999999999887776554 56889999
Q ss_pred EccCCcccccCCccccCC---------------------------CCCCEEEccCCcCcccCchhhhcCcc--ccccccc
Q 035786 220 NLSDNALTGFIPSEVGNL---------------------------DKLIELDLSKNSISGSLPLELRGLRN--LAKLVIS 270 (693)
Q Consensus 220 ~Ls~N~l~g~~p~~~~~l---------------------------~~L~~L~Ls~N~l~g~~p~~~~~l~~--L~~L~Ls 270 (693)
++++|++++..|..+..+ ++|+.|++++|.+++..|..+.+++. |++|+++
T Consensus 177 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls 256 (680)
T 1ziw_A 177 ELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLS 256 (680)
T ss_dssp ECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECT
T ss_pred ECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECC
Confidence 999999988888766544 45677777788888777777877755 8888888
Q ss_pred cccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc-----CCc---cCcCCCCCCcEEE
Q 035786 271 ENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS-----WPI---LSTNGNASGAVFN 342 (693)
Q Consensus 271 ~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~-----~p~---~~~~~~~~l~~l~ 342 (693)
+|.+++..+. .|..+++|+.|++++|++++..|..+..+++|+.|++++|...+. +|. ..+..+..|+.|+
T Consensus 257 ~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 257 YNNLNVVGND-SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TSCCCEECTT-TTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCcCccCcc-cccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 8888765544 357788888888888888887777777777777777776655442 221 2344556677777
Q ss_pred ccCCccceecCC--CCCCCCCEEEccCCccee
Q 035786 343 ISNNMLYGDLNS--SSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 343 ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g 372 (693)
+++|.+.+..+. ..+++|+.|++++|.+++
T Consensus 336 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 336 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred CCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 777776665443 344556666666655443
No 42
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.98 E-value=2.1e-31 Score=303.19 Aligned_cols=156 Identities=26% Similarity=0.278 Sum_probs=118.6
Q ss_pred cCCCCCCEEEccCCcCcccC--chhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCc-ccccCCC
Q 035786 235 GNLDKLIELDLSKNSISGSL--PLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP-ATLFLRP 311 (693)
Q Consensus 235 ~~l~~L~~L~Ls~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p-~~l~~~~ 311 (693)
..+++|++|++++|.+++.. |..+.++++|++|++++|.+++..+ . +..+++|+.|++++|.+++..| ..+..++
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 421 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-N-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 421 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-E-EETCTTCCEEECTTSEEESCTTSCTTTTCT
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-c-ccccCCCCEEEccCCccccccchhhhhcCC
Confidence 35677888888888888654 7788888888888888888875433 3 5778888888888888887666 4677788
Q ss_pred CCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccc-eecCC--CCCCCCCEEEccCCcceeecCCCcC-----cccc
Q 035786 312 NLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLY-GDLNS--SSFRKFSLIDLSSNYFQGTVADDRG-----RNVS 383 (693)
Q Consensus 312 ~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~-g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~ 383 (693)
+|++|++++|++++..|. .+..+++|+.|++++|.+. +.+|. ..+++|+.||+++|.+++..|..+. +.++
T Consensus 422 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 500 (570)
T 2z63_A 422 NLIYLDISHTHTRVAFNG-IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500 (570)
T ss_dssp TCCEEECTTSCCEECCTT-TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEeCcCCcccccchh-hhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEe
Confidence 888888888888877663 5567788888888888887 56664 5667888888888888887776654 3567
Q ss_pred cCCCcCCCCc
Q 035786 384 LGRNCLQSVA 393 (693)
Q Consensus 384 l~~n~l~g~~ 393 (693)
+++|.+++.+
T Consensus 501 l~~n~l~~~~ 510 (570)
T 2z63_A 501 MASNQLKSVP 510 (570)
T ss_dssp CCSSCCSCCC
T ss_pred CCCCcCCCCC
Confidence 7788777654
No 43
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.98 E-value=4.7e-31 Score=302.79 Aligned_cols=297 Identities=21% Similarity=0.231 Sum_probs=249.1
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFS-NFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeChhhcc-CCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 6899999999999988777776 499999999999999998899999999999999999999998899999999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCC-cCcccccCCCCCCEEEccCCcccccCCccccCCC-------------
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTG-QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLD------------- 238 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~------------- 238 (693)
|++|.+++..|..++.+++|++|++++|.+++ .+|..++++++|++|++++|++++..|..++.++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 99999998877889999999999999999986 6799999999999999999999876665443322
Q ss_pred --------------------------------------------------------------------------------
Q 035786 239 -------------------------------------------------------------------------------- 238 (693)
Q Consensus 239 -------------------------------------------------------------------------------- 238 (693)
T Consensus 191 n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 191 NPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence
Q ss_pred -------------------------------------CCCEEEccCCcCcccCc--------------------hhhhcC
Q 035786 239 -------------------------------------KLIELDLSKNSISGSLP--------------------LELRGL 261 (693)
Q Consensus 239 -------------------------------------~L~~L~Ls~N~l~g~~p--------------------~~~~~l 261 (693)
+|++|++++|.+ +.+| ..+..+
T Consensus 271 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l 349 (606)
T 3vq2_A 271 TNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVAL 349 (606)
T ss_dssp CTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCC
T ss_pred cccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccC
Confidence 223333333333 1222 123356
Q ss_pred ccccccccccccccccC--CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCc
Q 035786 262 RNLAKLVISENGLEGQL--SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGA 339 (693)
Q Consensus 262 ~~L~~L~Ls~N~l~g~i--~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~ 339 (693)
++|++|++++|.+++.. +.. +..+++|+.|++++|.+++ +|..+..+++|+.|++++|++++..|...+..+++|+
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~-~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 427 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYS-DLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLL 427 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHH-HHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCC
T ss_pred CCCCEEECcCCccCCCcchhhh-hccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCC
Confidence 77888888889988652 443 5788999999999999986 6688999999999999999999888755678899999
Q ss_pred EEEccCCccceecCC--CCCCCCCEEEccCCcceee-cCCCcC-----cccccCCCcCCCCc
Q 035786 340 VFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGT-VADDRG-----RNVSLGRNCLQSVA 393 (693)
Q Consensus 340 ~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~-ip~~~~-----~~~~l~~n~l~g~~ 393 (693)
.|++++|.+.+.+|. ..+++|+.|++++|.+++. +|..+. +.+++++|.+.+.+
T Consensus 428 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 489 (606)
T 3vq2_A 428 YLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQIS 489 (606)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred EEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccC
Confidence 999999999998876 5788999999999999994 676654 36789999887754
No 44
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=1.2e-31 Score=304.03 Aligned_cols=206 Identities=19% Similarity=0.173 Sum_probs=167.9
Q ss_pred eecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcc
Q 035786 58 QCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGS 137 (693)
Q Consensus 58 ~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~ 137 (693)
.|....| .++++... ..+|+. + .+.|+.|++++|.+.+..|..+. .+++|++|+|++|.+++..|..
T Consensus 3 ~C~~~~~--c~~~~~~l---~~ip~~-----~--~~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~ 69 (549)
T 2z81_A 3 SCDASGV--CDGRSRSF---TSIPSG-----L--TAAMKSLDLSFNKITYIGHGDLR-ACANLQVLILKSSRINTIEGDA 69 (549)
T ss_dssp EECTTSE--EECTTSCC---SSCCSC-----C--CTTCCEEECCSSCCCEECSSTTS-SCTTCCEEECTTSCCCEECTTT
T ss_pred cCCCCce--EECCCCcc---cccccc-----C--CCCccEEECcCCccCccChhhhh-cCCcccEEECCCCCcCccChhh
Confidence 5765555 56665432 344442 2 26899999999999988888886 5999999999999999999999
Q ss_pred cCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCc-ccccCCCC
Q 035786 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIP-SGLYSLSS 215 (693)
Q Consensus 138 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~ 215 (693)
|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++ .+|..+..+++|++|++++|.+.+.+| ..+..+++
T Consensus 70 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~ 149 (549)
T 2z81_A 70 FYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTS 149 (549)
T ss_dssp TTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCE
T ss_pred ccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccc
Confidence 9999999999999999998888889999999999999999987 467889999999999999999666665 68999999
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 216 IQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 216 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
|++|++++|++++.+|..++.+++|++|+++.|.+....+..+..+++|++|++++|++++
T Consensus 150 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred cCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 9999999999999999999887777777777776653222223456666666666666654
No 45
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=5.2e-30 Score=271.44 Aligned_cols=267 Identities=23% Similarity=0.277 Sum_probs=224.2
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..+..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|+
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~ 127 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFK-NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTT-TCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCEeChhhhc-cCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEE
Confidence 4789999999999876666776 5999999999999999988999999999999999999998 5666654 7999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCC--cCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcC
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTG--QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
+++|.+++..+..+..+++|+.|++++|.++. ..+..+..+++|+.|++++|+++. +|..+. ++|++|++++|.+
T Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCC
T ss_pred CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcC
Confidence 99999998888889999999999999999963 678889999999999999999985 666554 7999999999999
Q ss_pred cccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCcc
Q 035786 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPIL 330 (693)
Q Consensus 251 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~ 330 (693)
++..|..+.++++|++|++++|.+++..+. .+..+++|+.|++++|+++ .+|.++..+++|++|++++|+|++..+ .
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~-~ 281 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNG-SLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS-N 281 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTT-TGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT-T
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChh-hccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccCh-h
Confidence 999899999999999999999999875554 4578999999999999999 788889999999999999999986444 3
Q ss_pred CcC------CCCCCcEEEccCCccce-ecCC---CCCCCCCEEEccCCc
Q 035786 331 STN------GNASGAVFNISNNMLYG-DLNS---SSFRKFSLIDLSSNY 369 (693)
Q Consensus 331 ~~~------~~~~l~~l~ls~N~l~g-~~~~---~~~~~l~~ldLs~N~ 369 (693)
.+. ....+..+++++|.+.. .++. ..+..++.++|++|+
T Consensus 282 ~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 282 DFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 332 23567888999988752 2322 456678888888874
No 46
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.5e-30 Score=274.23 Aligned_cols=266 Identities=24% Similarity=0.251 Sum_probs=215.3
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..|..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|+
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFK-GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR 129 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTT-TCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCccCHhHhh-CCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE
Confidence 5788999999998876676776 4999999999999999888999999999999999999998 5666555 7899999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCC--CcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcC
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFT--GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
+++|.+++..+..+..+++|+.|++++|.++ +..|..+..+ +|+.|++++|++++ +|..+. ++|++|++++|.+
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcC
Confidence 9999999777777899999999999999986 4667778877 99999999999986 666554 7899999999999
Q ss_pred cccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCcc
Q 035786 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPIL 330 (693)
Q Consensus 251 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~ 330 (693)
++..|..+.++++|++|++++|++++..+ ..|..+++|+.|++++|+++ .+|..+..+++|+.|++++|+|++..+.
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~- 282 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIEN-GSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVN- 282 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCT-TGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTT-
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCCh-hHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChh-
Confidence 98888889999999999999999986544 34678899999999999998 7788888999999999999999854443
Q ss_pred CcCC------CCCCcEEEccCCccc--eecCC--CCCCCCCEEEccCCc
Q 035786 331 STNG------NASGAVFNISNNMLY--GDLNS--SSFRKFSLIDLSSNY 369 (693)
Q Consensus 331 ~~~~------~~~l~~l~ls~N~l~--g~~~~--~~~~~l~~ldLs~N~ 369 (693)
.+.. ...++.+++++|.+. +..|. ..+++|+.+++++|.
T Consensus 283 ~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 283 DFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred HccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 2222 356778888888876 22222 456678888888774
No 47
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.2e-30 Score=292.45 Aligned_cols=320 Identities=22% Similarity=0.204 Sum_probs=249.0
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.|+|++.... .+++ ..+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|+++
T Consensus 28 ~~l~~L~Ls~n~l~---~~~~----~~~~~l~~L~~L~Ls~n~i~~i~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (570)
T 2z63_A 28 FSTKNLDLSFNPLR---HLGS----YSFFSFPELQVLDLSRCEIQTIEDGAYQ-SLSHLSTLILTGNPIQSLALGAFSGL 99 (570)
T ss_dssp SSCCEEECCSCCCC---EECT----TTTTTCSSCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred ccccEEEccCCccC---ccCh----hHhhCCCCceEEECCCCcCCccCccccc-CchhCCEEeCcCCcCCccCHhhhcCc
Confidence 35788888875432 2222 3678899999999999999876666676 59999999999999999888999999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCcccccCCCCC----
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI---- 216 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---- 216 (693)
++|++|+|++|.+++..+..++++++|++|++++|.+++ .+|..++++++|++|++++|.+++..|..+..+++|
T Consensus 100 ~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~ 179 (570)
T 2z63_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179 (570)
T ss_dssp TTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCC
T ss_pred cccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhh
Confidence 999999999999997766679999999999999999987 579999999999999999999877655555544444
Q ss_pred CEEEccCCccccc-------------------------------------------------------------------
Q 035786 217 QFLNLSDNALTGF------------------------------------------------------------------- 229 (693)
Q Consensus 217 ~~L~Ls~N~l~g~------------------------------------------------------------------- 229 (693)
+.|++++|.+++.
T Consensus 180 ~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l 259 (570)
T 2z63_A 180 LSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTI 259 (570)
T ss_dssp CEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEE
T ss_pred hhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccch
Confidence 4445544443332
Q ss_pred -------------------------------------CCccccCCCCCCEEEccCCcCcccCchh-h-------------
Q 035786 230 -------------------------------------IPSEVGNLDKLIELDLSKNSISGSLPLE-L------------- 258 (693)
Q Consensus 230 -------------------------------------~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~------------- 258 (693)
+|..+..+ +|++|++++|.++ .+|.. +
T Consensus 260 ~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~ 337 (570)
T 2z63_A 260 EEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKG 337 (570)
T ss_dssp EEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBS
T ss_pred hhhhhhcchhhhhhchhhhcCcCcccEEEecCccchhhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCcc
Confidence 33333333 3334444444333 11111 0
Q ss_pred ------hcCccccccccccccccccC--CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCcc
Q 035786 259 ------RGLRNLAKLVISENGLEGQL--SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPIL 330 (693)
Q Consensus 259 ------~~l~~L~~L~Ls~N~l~g~i--~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~ 330 (693)
..+++|++|++++|.+++.. +. .+..+++|+.|++++|.+++..+. +..+++|+.|++++|++++..|..
T Consensus 338 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~ 415 (570)
T 2z63_A 338 GNAFSEVDLPSLEFLDLSRNGLSFKGCCSQ-SDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFS 415 (570)
T ss_dssp CCBCCCCBCTTCCEEECCSSCCBEEEEEEH-HHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSC
T ss_pred ccccccccCCCCCEEeCcCCccCccccccc-cccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchh
Confidence 46788999999999987643 33 346789999999999999976555 889999999999999999887766
Q ss_pred CcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcce-eecCCCcC-----cccccCCCcCCCCc
Q 035786 331 STNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQ-GTVADDRG-----RNVSLGRNCLQSVA 393 (693)
Q Consensus 331 ~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~-g~ip~~~~-----~~~~l~~n~l~g~~ 393 (693)
.+..+++|+.|++++|.+.+.+|. ..+++|+.|++++|.++ +.+|..+. +.+++++|.+.+..
T Consensus 416 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 486 (570)
T 2z63_A 416 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 486 (570)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred hhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCC
Confidence 678889999999999999988775 56889999999999998 68887665 36788999887653
No 48
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=4.3e-30 Score=298.91 Aligned_cols=296 Identities=22% Similarity=0.225 Sum_probs=249.5
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.+++|++++|.+.+..|..|.. +++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTR-YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGG-GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhC-CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 67999999999999877777764 99999999999999999999999999999999999999976666899999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCcccc--CCCCCCEEEccCCcC
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG--NLDKLIELDLSKNSI 250 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~Ls~N~l 250 (693)
|++|.+++..|..+..+++|++|++++|.+++..|..+..+++|++|++++|++++..|..+. .+++|++|++++|.+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999988788999999999999999999999999999999999999999999988777654 568999999999999
Q ss_pred cccCchhhhcCc---------------------------cccccccccccccccCCCcccCCCC--CCCEEEccCCcCCC
Q 035786 251 SGSLPLELRGLR---------------------------NLAKLVISENGLEGQLSEGLFPTLD--QLQVVDLSGNKLDG 301 (693)
Q Consensus 251 ~g~~p~~~~~l~---------------------------~L~~L~Ls~N~l~g~i~~~~~~~l~--~L~~L~Ls~N~l~g 301 (693)
++..|..+..++ +|+.|++++|.+++..|.. |..++ +|+.|++++|++++
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~-~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT-FLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT-TGGGGGSCCCEEECTTSCCCE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH-hhccCcCCCCEEECCCCCcCc
Confidence 998888777654 4566777777777655544 45554 49999999999998
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceec-----CC------CCCCCCCEEEccCCcc
Q 035786 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDL-----NS------SSFRKFSLIDLSSNYF 370 (693)
Q Consensus 302 ~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~-----~~------~~~~~l~~ldLs~N~l 370 (693)
..|..+..+++|++|++++|++++..|. .+..+.+|+.|++++|...+.+ |. ..+++|+.|++++|.+
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l 341 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSH-SLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDI 341 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTT-TTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCB
T ss_pred cCcccccCcccccEeeCCCCccCccChh-hhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCcc
Confidence 8888888999999999999999887773 5677888999999988766533 21 4567899999999999
Q ss_pred eeecCCCcC-----cccccCCCcCCC
Q 035786 371 QGTVADDRG-----RNVSLGRNCLQS 391 (693)
Q Consensus 371 ~g~ip~~~~-----~~~~l~~n~l~g 391 (693)
++..|..+. +.+++++|.+.+
T Consensus 342 ~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 342 PGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred CCCChhHhccccCCcEEECCCCchhh
Confidence 987766543 356677776544
No 49
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=9e-30 Score=292.97 Aligned_cols=318 Identities=26% Similarity=0.282 Sum_probs=234.9
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS 142 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~ 142 (693)
.++.|+|++... ..+++ ..+.++++|++|++++|.+.+-.|..|. .+++|++|+|++|++++..+..|.+++
T Consensus 53 ~~~~LdLs~N~i---~~l~~----~~f~~l~~L~~L~Ls~N~i~~i~~~~f~-~L~~L~~L~Ls~N~l~~l~~~~f~~L~ 124 (635)
T 4g8a_A 53 STKNLDLSFNPL---RHLGS----YSFFSFPELQVLDLSRCEIQTIEDGAYQ-SLSHLSTLILTGNPIQSLALGAFSGLS 124 (635)
T ss_dssp TCCEEECTTSCC---CEECT----TTTTTCTTCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCEECGGGGTTCT
T ss_pred CCCEEEeeCCCC---CCCCH----HHHhCCCCCCEEECCCCcCCCcChhHhc-CCCCCCEEEccCCcCCCCCHHHhcCCC
Confidence 467888887542 23433 3678999999999999999865555665 599999999999999988778899999
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCcccccCC--------
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSL-------- 213 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-------- 213 (693)
+|++|+|++|++++..+..|+++++|++|+|++|.+++ .+|..+..+++|++|++++|++++..|..+..+
T Consensus 125 ~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~ 204 (635)
T 4g8a_A 125 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 204 (635)
T ss_dssp TCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCC
T ss_pred CCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhh
Confidence 99999999999998777789999999999999999976 468889999999999999998765444322111
Q ss_pred --------------------------------------------------------------------------------
Q 035786 214 -------------------------------------------------------------------------------- 213 (693)
Q Consensus 214 -------------------------------------------------------------------------------- 213 (693)
T Consensus 205 ~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 284 (635)
T 4g8a_A 205 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 284 (635)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEE
T ss_pred hhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhh
Confidence
Q ss_pred -------------------------------------------CCCCEEEccCCcccccCCc------------------
Q 035786 214 -------------------------------------------SSIQFLNLSDNALTGFIPS------------------ 232 (693)
Q Consensus 214 -------------------------------------------~~L~~L~Ls~N~l~g~~p~------------------ 232 (693)
.+|+.|++.+|.+.+..+.
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 285 EFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp EEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCB
T ss_pred hhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCC
Confidence 1223333333333221111
Q ss_pred -cccCCCCCCEEEccCCcCcc-------------------------------------------------c-CchhhhcC
Q 035786 233 -EVGNLDKLIELDLSKNSISG-------------------------------------------------S-LPLELRGL 261 (693)
Q Consensus 233 -~~~~l~~L~~L~Ls~N~l~g-------------------------------------------------~-~p~~~~~l 261 (693)
....+++|+.|++++|.+.. . .+..+..+
T Consensus 365 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l 444 (635)
T 4g8a_A 365 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 444 (635)
T ss_dssp CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTC
T ss_pred cccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccc
Confidence 11234556666666655431 1 11234566
Q ss_pred ccccccccccccccccCCCcccCCCCCCCEEEccCCcC-CCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcE
Q 035786 262 RNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL-DGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAV 340 (693)
Q Consensus 262 ~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l-~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~ 340 (693)
++++.++++.|.+.+..+ ..+..++.|+.|++++|++ .+.+|..+..+++|++|+|++|+|++..| ..+..+++|+.
T Consensus 445 ~~l~~l~ls~n~l~~~~~-~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~-~~f~~l~~L~~ 522 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFN-GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP-TAFNSLSSLQV 522 (635)
T ss_dssp TTCCEEECTTSCCEECCT-TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCE
T ss_pred cccccccccccccccccc-cccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcCh-HHHcCCCCCCE
Confidence 677788888888886555 4467888999999999975 45678888889999999999999998777 45678889999
Q ss_pred EEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC------cccccCCCcCC
Q 035786 341 FNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG------RNVSLGRNCLQ 390 (693)
Q Consensus 341 l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~------~~~~l~~n~l~ 390 (693)
|+|++|++++..|. ..+++|+.|||++|++++..|..+. +.+++++|-+.
T Consensus 523 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 523 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp EECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred EECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 99999999886654 5678899999999999998887653 24567777553
No 50
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=287.34 Aligned_cols=165 Identities=20% Similarity=0.327 Sum_probs=139.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-----CCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-----ETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~ 582 (693)
++|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|+++|++++|||||++++++... ...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 3577788999999999999986 57999999999754332 45788999999999999999999987432 246
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.|||||||+ |+|.+++... ..+++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~--------~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~D 201 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS--------QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGD 201 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECC
T ss_pred EEEEEeCCC-CCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEee
Confidence 799999996 7899999753 3599999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCC---Ccceeeeeehhhhhhh
Q 035786 663 LSELHAQGDS---HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~---~~~~~~~~~~~~~y~a 688 (693)
||+|+.+... .....+.++||++|||
T Consensus 202 FGla~~~~~~~~~~~~~~~~~~GT~~Y~A 230 (398)
T 4b99_A 202 FGMARGLCTSPAEHQYFMTEYVATRWYRA 230 (398)
T ss_dssp CTTCBCC-------CCCCCSSCCCCTTCC
T ss_pred cceeeecccCccccccccccceeChHhcC
Confidence 9999987332 2333556899999997
No 51
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=8.4e-31 Score=280.29 Aligned_cols=259 Identities=19% Similarity=0.110 Sum_probs=201.6
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..+..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..+.++++|++|+
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQ-RCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTT-TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred ccCcEEECCCCcCcccCHHHhc-cCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 4788899999988865554665 489999999999999888888899999999999999999866555688899999999
Q ss_pred ccCCCCCCcCc-hhhhcCcCCCeeeccccc-CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcC
Q 035786 173 LSRNLLTGEIP-NAISLLGNLTRLNLASNF-FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 173 Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
|++|.+++..+ ..+..+++|++|++++|. +++..|..+..+++|+.|++++|++++..|..++.+++|++|++++|.+
T Consensus 131 L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 131 LLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 99998884333 378888999999999884 6665677888889999999999999888888899999999999999988
Q ss_pred cccCchhhhcCccccccccccccccccCCCcc--cCCCCCCCEEEccCCcCCC----cCcccccCCCCCCEEEccCCcCc
Q 035786 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGL--FPTLDQLQVVDLSGNKLDG----ALPATLFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 251 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~--~~~l~~L~~L~Ls~N~l~g----~~p~~l~~~~~L~~L~Ls~N~l~ 324 (693)
+...+..+..+++|++|++++|.+++..+..+ ......++.+++++|.+++ .+|.++..+++|+.|+|++|+++
T Consensus 211 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 211 ILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp TTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred ccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 75444455668889999999998886443322 1235667888888888876 46777888888888888888888
Q ss_pred ccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 325 GSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 325 g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
.+|...+..+++|+.|++++|++.|++|
T Consensus 291 -~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 291 -SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 6665445566667777777776666554
No 52
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=2.7e-29 Score=277.61 Aligned_cols=292 Identities=21% Similarity=0.186 Sum_probs=202.4
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.+++++.... .+ | .+..+++|++|++++|.+.+ +| ++ .+++|++|+|++|.+++. | ++++
T Consensus 42 ~~L~~L~Ls~n~l~---~~-~-----~l~~l~~L~~L~Ls~n~l~~-~~--~~-~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 42 ATLTSLDCHNSSIT---DM-T-----GIEKLTGLTKLICTSNNITT-LD--LS-QNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp TTCCEEECCSSCCC---CC-T-----TGGGCTTCSEEECCSSCCSC-CC--CT-TCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred CCCCEEEccCCCcc---cC-h-----hhcccCCCCEEEccCCcCCe-Ec--cc-cCCCCCEEECcCCCCcee-e--cCCC
Confidence 46777888764322 12 1 46778888888888888776 34 44 488888888888888764 3 7888
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEc
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 221 (693)
++|++|+|++|++++ +| ++.+++|++|++++|.+++. | ++.+++|++|++++|...+.+ .+..+++|+.|++
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 888888888888876 34 77888888888888888863 3 677788888888888666665 3677788888888
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCC
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
++|++++ +| ++.+++|+.|++++|++++. .++.+++|++|++++|++++ +| +..+++|+.|++++|++++
T Consensus 178 s~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip---~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 178 SFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID---VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSC
T ss_pred CCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC---ccccCCCCEEEeeCCcCCC
Confidence 8888876 44 77778888888888888764 37777888888888888876 55 4667788888888888877
Q ss_pred cCcccccCCC-------CCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC----------CCCCCCCEEE
Q 035786 302 ALPATLFLRP-------NLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS----------SSFRKFSLID 364 (693)
Q Consensus 302 ~~p~~l~~~~-------~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~----------~~~~~l~~ld 364 (693)
..+..+..+. +|+.|++++|++.|.+|. ..+..|+.|++++|.+.|.+|. ...++|+.|+
T Consensus 248 ~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~---~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~ 324 (457)
T 3bz5_A 248 LDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQA---EGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLY 324 (457)
T ss_dssp CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC---TTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred cCHHHCCCCCEEeccCCCCCEEECCCCccCCcccc---cccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEE
Confidence 6554444433 455666666666666652 4456677777777776666553 2234566777
Q ss_pred ccCCcceeecCCCc-C--cccccCCCcCCC
Q 035786 365 LSSNYFQGTVADDR-G--RNVSLGRNCLQS 391 (693)
Q Consensus 365 Ls~N~l~g~ip~~~-~--~~~~l~~n~l~g 391 (693)
+++|+|+| ++-.- . +.+++++|.+++
T Consensus 325 L~~N~l~~-l~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 325 LNNTELTE-LDVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CTTCCCSC-CCCTTCTTCSEEECCSSCCCB
T ss_pred CCCCcccc-cccccCCcCcEEECCCCCCCC
Confidence 77777776 33111 0 245666666665
No 53
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=1.6e-29 Score=279.43 Aligned_cols=277 Identities=22% Similarity=0.171 Sum_probs=237.1
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+.++++|++|++++|.+.+ +| .+.. +++|++|+|++|.+++. | ++++++|++|+|++|.+++. | ++++++
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~-~~-~l~~-l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~ 107 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITD-MT-GIEK-LTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTK 107 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCC-CT-TGGG-CTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTT
T ss_pred ChhHcCCCCEEEccCCCccc-Ch-hhcc-cCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCc
Confidence 57788999999999999987 46 5654 99999999999999985 4 89999999999999999975 4 899999
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|++|++++|.+++ +| ++.+++|++|++++|.+++. | ++.+++|++|++++|+..+.+ .++.+++|++|++++
T Consensus 108 L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 179 (457)
T 3bz5_A 108 LTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179 (457)
T ss_dssp CCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCC
Confidence 9999999999997 45 88999999999999999974 3 889999999999999777776 488999999999999
Q ss_pred CcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccC
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSW 327 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~ 327 (693)
|++++ +| +..+++|+.|++++|++++. + +..+++|+.|++++|++++ +| +..+++|+.|++++|++++..
T Consensus 180 n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~---l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 180 NKITE-LD--VSQNKLLNRLNCDTNNITKL-D---LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp SCCCC-CC--CTTCTTCCEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC
T ss_pred Cccce-ec--cccCCCCCEEECcCCcCCee-c---cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC
Confidence 99997 45 88999999999999999874 2 5789999999999999998 56 788999999999999999754
Q ss_pred CccCcCCCC-------CCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecCCCcC-------------cccccCCC
Q 035786 328 PILSTNGNA-------SGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG-------------RNVSLGRN 387 (693)
Q Consensus 328 p~~~~~~~~-------~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip~~~~-------------~~~~l~~n 387 (693)
+ ..+..+. .++.+++++|.+.|.+|...+++|+.||+++|.+.|.+|.... ..+++++|
T Consensus 250 ~-~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N 328 (457)
T 3bz5_A 250 V-STLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNT 328 (457)
T ss_dssp C-TTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTC
T ss_pred H-HHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCC
Confidence 3 3333332 5667788888888999988889999999999999999886432 23456666
Q ss_pred cCCCC
Q 035786 388 CLQSV 392 (693)
Q Consensus 388 ~l~g~ 392 (693)
.+++.
T Consensus 329 ~l~~l 333 (457)
T 3bz5_A 329 ELTEL 333 (457)
T ss_dssp CCSCC
T ss_pred ccccc
Confidence 66663
No 54
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.5e-29 Score=266.46 Aligned_cols=264 Identities=24% Similarity=0.310 Sum_probs=229.3
Q ss_pred CCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEc
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDL 173 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 173 (693)
+|+.++++++.+. .+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 5677788877765 677654 478999999999999888889999999999999999999988999999999999999
Q ss_pred cCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCccc--ccCCccccCCCCCCEEEccCCcCc
Q 035786 174 SRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT--GFIPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 174 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
++|.++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.++ +..|..+..+ +|++|++++|+++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 999998 6676654 89999999999999777777999999999999999996 4778888888 9999999999998
Q ss_pred ccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccC
Q 035786 252 GSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILS 331 (693)
Q Consensus 252 g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~ 331 (693)
+ +|..+. ++|++|++++|.+++..+. .|..+++|+.|++++|++++..|..+..+++|+.|+|++|+++ .+|. .
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~-~ 259 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELE-DLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA-G 259 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTT-SSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT-T
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHH-HhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh-h
Confidence 6 565544 7999999999999865544 4688999999999999999998889999999999999999999 7885 3
Q ss_pred cCCCCCCcEEEccCCccceecCC--------CCCCCCCEEEccCCcce
Q 035786 332 TNGNASGAVFNISNNMLYGDLNS--------SSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 332 ~~~~~~l~~l~ls~N~l~g~~~~--------~~~~~l~~ldLs~N~l~ 371 (693)
+..++.|+.|++++|++++..+. .....++.+++++|.+.
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred hhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 67789999999999999865432 11456889999999986
No 55
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.3e-30 Score=269.93 Aligned_cols=257 Identities=24% Similarity=0.209 Sum_probs=128.2
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCc--cCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAG--NVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+|++|+|++|.++...+..|+++++|++|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 34444444444443222234444444444444444441 12333444445555555555444 2344444445555555
Q ss_pred cccccCCCcCc-ccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc-cCchhhhcCccccccccccccc
Q 035786 197 LASNFFTGQIP-SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG-SLPLELRGLRNLAKLVISENGL 274 (693)
Q Consensus 197 Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l 274 (693)
+++|.+++..+ ..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|++|++++|.+
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 55555443322 344455555555555555555555555555555555555555544 3444555555555555555555
Q ss_pred cccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCC-CCCcEEEccCCccceecC
Q 035786 275 EGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGN-ASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 275 ~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~-~~l~~l~ls~N~l~g~~~ 353 (693)
++..|. .|..+++|+.|++++|++++..+..+..+++|+.|+|++|++++..|.. +..+ ..|+.|++++|.++++++
T Consensus 188 ~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 188 EQLSPT-AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE-LQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CEECTT-TTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSS-CCCCCTTCCEEECTTCCEECSGG
T ss_pred CCcCHH-HhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHH-HHhhhccCCEEEccCCCeecccC
Confidence 543332 2355556666666666666555555555666666666666666555532 2333 356666666666666544
Q ss_pred C----CCCCCCCEEEccCCcceeecCCCc
Q 035786 354 S----SSFRKFSLIDLSSNYFQGTVADDR 378 (693)
Q Consensus 354 ~----~~~~~l~~ldLs~N~l~g~ip~~~ 378 (693)
. ..++..+.+....+.+.+..|..+
T Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 266 HQSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp GHHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred hHHHHHHHHhhhhhhccccccccCCchhh
Confidence 2 112223334445566666666544
No 56
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=4.4e-30 Score=268.96 Aligned_cols=259 Identities=23% Similarity=0.227 Sum_probs=179.9
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCc--CCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSG--SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
+.|+.|++++|.+. .+|..+...+++|++|+|++|.++. .+|..+..+++|++|+|++|.+. .+|..+..+++|++
T Consensus 28 ~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~ 105 (306)
T 2z66_A 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEH 105 (306)
T ss_dssp TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCE
T ss_pred CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCE
Confidence 46777788877776 4555433357788888888887763 23556667777888888888776 45666777788888
Q ss_pred EEccCCCCCCcCc-hhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccc-cCCccccCCCCCCEEEccCC
Q 035786 171 LDLSRNLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTG-FIPSEVGNLDKLIELDLSKN 248 (693)
Q Consensus 171 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N 248 (693)
|++++|.+++..+ ..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|++|++++|
T Consensus 106 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 185 (306)
T 2z66_A 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185 (306)
T ss_dssp EECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCC
Confidence 8888887775544 467777788888888887777777777777788888888887776 56777777788888888888
Q ss_pred cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCC-CCCEEEccCCcCcccC
Q 035786 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP-NLRFLDLSRNNITGSW 327 (693)
Q Consensus 249 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~-~L~~L~Ls~N~l~g~~ 327 (693)
.+++..|..+..+++|++|+|++|.+++. +...|..+++|+.|++++|++++..|..+..++ +|++|+|++|.+++..
T Consensus 186 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 186 QLEQLSPTAFNSLSSLQVLNMSHNNFFSL-DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCSBC-CSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CcCCcCHHHhcCCCCCCEEECCCCccCcc-ChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 88777777777778888888888877753 333456777788888888888777777777764 7888888888777643
Q ss_pred CccC-cCCCCCCcEEEccCCccceecCC
Q 035786 328 PILS-TNGNASGAVFNISNNMLYGDLNS 354 (693)
Q Consensus 328 p~~~-~~~~~~l~~l~ls~N~l~g~~~~ 354 (693)
+... .......+.+.+..+.+.+..|.
T Consensus 265 ~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 265 EHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp GGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred ChHHHHHHHHhhhhhhccccccccCCch
Confidence 2110 01111222334455666666553
No 57
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=5.8e-29 Score=263.39 Aligned_cols=265 Identities=25% Similarity=0.322 Sum_probs=227.6
Q ss_pred CCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEc
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDL 173 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 173 (693)
+|+.++++++.+. .+|..+ .+.|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccC---CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4566666666655 466543 478999999999999888889999999999999999999888999999999999999
Q ss_pred cCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCccc--ccCCccccCCCCCCEEEccCCcCc
Q 035786 174 SRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT--GFIPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 174 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
++|.++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.++ +..+..+.++++|++|++++|.++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 999998 5676654 79999999999999888888999999999999999996 477889999999999999999998
Q ss_pred ccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccC
Q 035786 252 GSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILS 331 (693)
Q Consensus 252 g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~ 331 (693)
. +|..+. ++|++|++++|.+++..+. .|..+++|+.|++++|++++..+..+..+++|+.|+|++|+++ .+|. .
T Consensus 185 ~-l~~~~~--~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~-~ 258 (330)
T 1xku_A 185 T-IPQGLP--PSLTELHLDGNKITKVDAA-SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG-G 258 (330)
T ss_dssp S-CCSSCC--TTCSEEECTTSCCCEECTG-GGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT-T
T ss_pred c-CCcccc--ccCCEEECCCCcCCccCHH-HhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh-h
Confidence 5 555443 7999999999999876554 4688999999999999999988889999999999999999998 7775 4
Q ss_pred cCCCCCCcEEEccCCccceecCC--------CCCCCCCEEEccCCcce
Q 035786 332 TNGNASGAVFNISNNMLYGDLNS--------SSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 332 ~~~~~~l~~l~ls~N~l~g~~~~--------~~~~~l~~ldLs~N~l~ 371 (693)
+..++.|+.|++++|++++..+. .....++.+++++|.+.
T Consensus 259 l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 259 LADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred hccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 57788999999999999864432 12367889999999885
No 58
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=7.7e-29 Score=275.28 Aligned_cols=260 Identities=25% Similarity=0.311 Sum_probs=136.9
Q ss_pred cccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCC
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 168 (693)
+.++++|++|++++|.+.+..| +. .+++|++|+|++|.+++..+ ++++++|++|++++|.+.+. | .+..+++|
T Consensus 86 ~~~l~~L~~L~l~~n~l~~~~~--~~-~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L 158 (466)
T 1o6v_A 86 LKNLTKLVDILMNNNQIADITP--LA-NLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSL 158 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GT-TCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTC
T ss_pred hhccccCCEEECCCCccccChh--hc-CCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcc
Confidence 4556666666666666654333 33 36666666666666654322 56666666666666665532 2 23333333
Q ss_pred CEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCC
Q 035786 169 SNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248 (693)
Q Consensus 169 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 248 (693)
++|+++ |.+.+. + .+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..| ++.+++|++|++++|
T Consensus 159 ~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 231 (466)
T 1o6v_A 159 QQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGN 231 (466)
T ss_dssp SEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred cEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCC
Confidence 333332 222211 1 245555666666666665532 235555666666666666554433 455555666666666
Q ss_pred cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCC
Q 035786 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 249 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
.+++. ..+..+++|++|++++|.+++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++..|
T Consensus 232 ~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 304 (466)
T 1o6v_A 232 QLKDI--GTLASLTNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304 (466)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG
T ss_pred Ccccc--hhhhcCCCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh
Confidence 55542 235555556666666655554332 3455555555555555554333 4455555555555555554332
Q ss_pred ccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCccee
Q 035786 329 ILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 329 ~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g 372 (693)
+..+++|+.|++++|++++..|...+++|+.|++++|.+++
T Consensus 305 ---~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 305 ---ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp ---GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC
T ss_pred ---hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCC
Confidence 23445555555555555554444445555555555555554
No 59
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.2e-29 Score=290.61 Aligned_cols=270 Identities=24% Similarity=0.231 Sum_probs=235.6
Q ss_pred cccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCC
Q 035786 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELK 166 (693)
Q Consensus 87 ~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 166 (693)
..+.+++.|++|++++|.+.+..|..|+ .+++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|++++
T Consensus 93 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 171 (597)
T 3oja_B 93 YAFAYAHTIQKLYMGFNAIRYLPPHVFQ-NVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATT 171 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCT
T ss_pred HHhcCCCCCCEEECCCCcCCCCCHHHHc-CCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCC
Confidence 3678999999999999999987777776 499999999999999977677789999999999999999999999999999
Q ss_pred CCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEcc
Q 035786 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLS 246 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 246 (693)
+|++|+|++|.+++. + +..+++|+.|++++|.+++ +...++|+.|++++|.++...+. + .++|+.|+|+
T Consensus 172 ~L~~L~L~~N~l~~~-~--~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~ 240 (597)
T 3oja_B 172 SLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQ 240 (597)
T ss_dssp TCCEEECTTSCCSBC-C--GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECC
T ss_pred cCcEEECcCCCCCCc-C--hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccc-c--CCCCCEEECC
Confidence 999999999999965 2 5678999999999999875 34557899999999999865433 2 3689999999
Q ss_pred CCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc
Q 035786 247 KNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326 (693)
Q Consensus 247 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~ 326 (693)
+|.+++ +..+..+++|+.|+|++|.+++.+|.. |..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .
T Consensus 241 ~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~ 315 (597)
T 3oja_B 241 HNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHP-FVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-H 315 (597)
T ss_dssp SSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGG-GTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-C
T ss_pred CCCCCC--ChhhccCCCCCEEECCCCccCCCCHHH-hcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-c
Confidence 999997 468999999999999999999877765 5889999999999999997 5777788999999999999999 5
Q ss_pred CCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecC
Q 035786 327 WPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVA 375 (693)
Q Consensus 327 ~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip 375 (693)
+|. .+..++.|+.|+|++|.+.+. +...++.|+.|++++|+++|..+
T Consensus 316 i~~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 316 VER-NQPQFDRLENLYLDHNSIVTL-KLSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp CGG-GHHHHTTCSEEECCSSCCCCC-CCCTTCCCSEEECCSSCEEHHHH
T ss_pred cCc-ccccCCCCCEEECCCCCCCCc-ChhhcCCCCEEEeeCCCCCChhH
Confidence 664 346778999999999999864 56788999999999999998643
No 60
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=7.9e-29 Score=275.19 Aligned_cols=298 Identities=25% Similarity=0.312 Sum_probs=250.7
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.+++.+.... .+ +.+..+++|++|++++|.+.+..| +. .+++|++|+|++|.+++..| ++++
T Consensus 46 ~~l~~L~l~~~~i~---~l------~~~~~l~~L~~L~Ls~n~l~~~~~--~~-~l~~L~~L~l~~n~l~~~~~--~~~l 111 (466)
T 1o6v_A 46 DQVTTLQADRLGIK---SI------DGVEYLNNLTQINFSNNQLTDITP--LK-NLTKLVDILMNNNQIADITP--LANL 111 (466)
T ss_dssp HTCCEEECCSSCCC---CC------TTGGGCTTCCEEECCSSCCCCCGG--GT-TCTTCCEEECCSSCCCCCGG--GTTC
T ss_pred ccccEEecCCCCCc---cC------cchhhhcCCCEEECCCCccCCchh--hh-ccccCCEEECCCCccccChh--hcCC
Confidence 36788888764321 22 246789999999999999886544 65 59999999999999997655 9999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEc
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 221 (693)
++|++|+|++|.+++..+ +.++++|++|++++|.+++ +| .+..+++|+.|+++ |.+.+.. .+.++++|+.|++
T Consensus 112 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l 184 (466)
T 1o6v_A 112 TNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDI 184 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEEC
Confidence 999999999999986543 8999999999999999986 44 58999999999996 5665443 3899999999999
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCC
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
++|.+++. ..+..+++|++|++++|.+++..| ++.+++|++|++++|.+++. + .+..+++|+.|++++|.+++
T Consensus 185 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~--~l~~l~~L~~L~l~~n~l~~ 257 (466)
T 1o6v_A 185 SSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-G--TLASLTNLTDLDLANNQISN 257 (466)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-G--GGGGCTTCSEEECCSSCCCC
T ss_pred cCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-h--hhhcCCCCCEEECCCCcccc
Confidence 99999864 358999999999999999998766 78899999999999999853 3 35788999999999999998
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecCCCcC--
Q 035786 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG-- 379 (693)
Q Consensus 302 ~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip~~~~-- 379 (693)
..| +..+++|+.|++++|++++..| +..++.|+.|++++|++.+..+...+++|+.|++++|.+++..|....
T Consensus 258 ~~~--~~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~ 332 (466)
T 1o6v_A 258 LAP--LSGLTKLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTK 332 (466)
T ss_dssp CGG--GTTCTTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGGGGGCTT
T ss_pred chh--hhcCCCCCEEECCCCccCcccc---ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchhhccCcc
Confidence 766 8889999999999999997544 567889999999999999877667889999999999999998763211
Q ss_pred -cccccCCCcCCCC
Q 035786 380 -RNVSLGRNCLQSV 392 (693)
Q Consensus 380 -~~~~l~~n~l~g~ 392 (693)
+.+.+++|.+.+.
T Consensus 333 L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 333 LQRLFFYNNKVSDV 346 (466)
T ss_dssp CCEEECCSSCCCCC
T ss_pred CCEeECCCCccCCc
Confidence 3577888888775
No 61
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=1.5e-28 Score=261.90 Aligned_cols=297 Identities=19% Similarity=0.279 Sum_probs=236.8
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
..++.+++++.... .+ ..+..+++|++|++++|.+.+ +|+ +. .+++|++|+|++|.+++ + +.|.++
T Consensus 44 ~~L~~L~l~~~~i~---~~------~~~~~~~~L~~L~l~~n~i~~-~~~-~~-~l~~L~~L~L~~n~i~~-~-~~~~~l 109 (347)
T 4fmz_A 44 ESITKLVVAGEKVA---SI------QGIEYLTNLEYLNLNGNQITD-ISP-LS-NLVKLTNLYIGTNKITD-I-SALQNL 109 (347)
T ss_dssp TTCSEEECCSSCCC---CC------TTGGGCTTCCEEECCSSCCCC-CGG-GT-TCTTCCEEECCSSCCCC-C-GGGTTC
T ss_pred ccccEEEEeCCccc---cc------hhhhhcCCccEEEccCCcccc-chh-hh-cCCcCCEEEccCCcccC-c-hHHcCC
Confidence 46778888764321 12 247788999999999998875 454 54 59999999999999886 3 468999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEc
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 221 (693)
++|++|+|++|.+.+. |. +..+++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++
T Consensus 110 ~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l 184 (347)
T 4fmz_A 110 TNLRELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSL 184 (347)
T ss_dssp TTCSEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEEC
T ss_pred CcCCEEECcCCcccCc-hh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEc
Confidence 9999999999999854 43 88999999999999976655544 8899999999999999886544 888999999999
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCC
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
++|.+++.. . +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++
T Consensus 185 ~~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~ 257 (347)
T 4fmz_A 185 NYNQIEDIS-P-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP---LANLSQLTWLEIGTNQISD 257 (347)
T ss_dssp TTSCCCCCG-G-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCC
T ss_pred cCCcccccc-c-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc---hhcCCCCCEEECCCCccCC
Confidence 999998643 3 8889999999999999987655 8889999999999999985433 5788999999999999987
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCC-c
Q 035786 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADD-R 378 (693)
Q Consensus 302 ~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~-~ 378 (693)
. ..+..+++|+.|++++|++++. | .+..+++|+.|++++|++.+..+. ..+++|+.|++++|++++..|.. +
T Consensus 258 ~--~~~~~l~~L~~L~l~~n~l~~~-~--~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l 332 (347)
T 4fmz_A 258 I--NAVKDLTKLKMLNVGSNQISDI-S--VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASL 332 (347)
T ss_dssp C--GGGTTCTTCCEEECCSSCCCCC-G--GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGC
T ss_pred C--hhHhcCCCcCEEEccCCccCCC-h--hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhh
Confidence 4 4678889999999999999864 4 356778899999999999876654 56789999999999998876621 1
Q ss_pred C--cccccCCCcC
Q 035786 379 G--RNVSLGRNCL 389 (693)
Q Consensus 379 ~--~~~~l~~n~l 389 (693)
. ..+++++|.+
T Consensus 333 ~~L~~L~l~~N~i 345 (347)
T 4fmz_A 333 SKMDSADFANQVI 345 (347)
T ss_dssp TTCSEESSSCC--
T ss_pred hccceeehhhhcc
Confidence 1 2456666654
No 62
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.2e-29 Score=266.38 Aligned_cols=226 Identities=23% Similarity=0.280 Sum_probs=202.1
Q ss_pred CCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCee
Q 035786 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 116 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 195 (693)
..++++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..+..+++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3689999999999998 78989999999999999999999 89999999999999999999999 889999999999999
Q ss_pred ecccccCCCcCcccccC---------CCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccc
Q 035786 196 NLASNFFTGQIPSGLYS---------LSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266 (693)
Q Consensus 196 ~Ls~N~l~g~~p~~~~~---------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 266 (693)
++++|++.+.+|..+.. +++|++|+|++|+++ .+|..++++++|++|++++|.+++ +|..+..+++|++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 99999999999988765 899999999999998 788889999999999999999985 5667899999999
Q ss_pred cccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 267 L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
|+|++|++.+.+|.. |..+++|+.|++++|++.+.+|..+..+++|+.|+|++|++.|.+|. .+..++.++.++++.|
T Consensus 234 L~Ls~n~~~~~~p~~-~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~-~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 234 LDLRGCTALRNYPPI-FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS-LIAQLPANCIILVPPH 311 (328)
T ss_dssp EECTTCTTCCBCCCC-TTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCG-GGGGSCTTCEEECCGG
T ss_pred EECcCCcchhhhHHH-hcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccH-HHhhccCceEEeCCHH
Confidence 999999998888875 47888999999999999999999899999999999999999999985 4566777777777766
Q ss_pred cc
Q 035786 347 ML 348 (693)
Q Consensus 347 ~l 348 (693)
.+
T Consensus 312 ~~ 313 (328)
T 4fcg_A 312 LQ 313 (328)
T ss_dssp GS
T ss_pred HH
Confidence 55
No 63
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.96 E-value=4.3e-30 Score=274.46 Aligned_cols=146 Identities=15% Similarity=0.202 Sum_probs=127.7
Q ss_pred HHhCCCCccCccccCCeeeEEEEEe----CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
+..+.|...+.||+|+||+||+|+. ..++.||||++.... ...++.+|+++|.++ +|||||++++++.+ ++..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRK-NDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-TTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-CCEE
Confidence 3456788999999999999999974 246889999986533 345688999999998 69999999988765 5789
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGS 662 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~D 662 (693)
++|||||++|+|.++++ .+++.+...|+.|++.||+|||+. +||||||||+|||++.+ +.+||+|
T Consensus 96 ~lvmE~~~g~~L~~~~~-----------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~D 161 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-----------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVD 161 (361)
T ss_dssp EEEEECCCCCCHHHHHT-----------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECC
T ss_pred EEEEeCCCcccHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECc
Confidence 99999999999999984 288899999999999999999998 99999999999999977 7999999
Q ss_pred cccccccC
Q 035786 663 LSELHAQG 670 (693)
Q Consensus 663 fgla~~~~ 670 (693)
||+|+...
T Consensus 162 FGla~~~~ 169 (361)
T 4f9c_A 162 FGLAQGTH 169 (361)
T ss_dssp CTTCEECT
T ss_pred CCCCcccC
Confidence 99998763
No 64
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1e-30 Score=274.69 Aligned_cols=250 Identities=20% Similarity=0.189 Sum_probs=205.5
Q ss_pred cccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCC-CcCCCcccC-------CCccCCEEecccCcCCccCcc
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSL-SGSIPGSFG-------NLSRLNVLYLSGNSLAGNVPA 160 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l-~g~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~ 160 (693)
....+.|+.+++++|.+ .+|..+.. . |+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~-~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTD-I--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHH-H--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHH-H--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 45567788889999999 88988765 2 99999999999 556777766 799999999999999999998
Q ss_pred cc--CCCCCCCEEEccCCCCCCcCchhhhcC-----cCCCeeecccccCCCcCcccccCCCCCCEEEccCCccccc--CC
Q 035786 161 TL--GELKKLSNLDLSRNLLTGEIPNAISLL-----GNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGF--IP 231 (693)
Q Consensus 161 ~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p 231 (693)
.+ ..+++|++|+|++|.+++. |..+..+ ++|++|+|++|.+++..|..++.+++|++|+|++|++.+. +|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8999999999999999987 8888887 8999999999999988889999999999999999998775 33
Q ss_pred ccc--cCCCCCCEEEccCCcCcc--cCc-hhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCccc
Q 035786 232 SEV--GNLDKLIELDLSKNSISG--SLP-LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPAT 306 (693)
Q Consensus 232 ~~~--~~l~~L~~L~Ls~N~l~g--~~p-~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~ 306 (693)
..+ +.+++|++|++++|++++ .++ ..+.++++|++|++++|++++.+|...+..+++|+.|++++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 444 889999999999999983 222 345678899999999999988776555667788999999999888 67777
Q ss_pred ccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccce
Q 035786 307 LFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYG 350 (693)
Q Consensus 307 l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g 350 (693)
+. ++|++|||++|+|++. |. +..++.|+.|++++|++++
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~--~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS--PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC--TTTSCEEEEEECTTCTTTC
T ss_pred cc--CCceEEECCCCCCCCC-hh--HhhCCCCCEEeccCCCCCC
Confidence 66 7888888888888865 53 4556666666666666654
No 65
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.96 E-value=1.1e-29 Score=286.33 Aligned_cols=162 Identities=19% Similarity=0.183 Sum_probs=137.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHH---HHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESY---MMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f---~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...++||+|+||+||+|+. .+|+.||||++.+.. .....+ ..|+++++.++|||||++++++.+ ++..
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-~~~l 267 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKL 267 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-CCEE
Confidence 4588889999999999999996 469999999996532 122233 344677888999999999988765 5789
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|+|||||++|+|.++|.+.. .++......|+.||+.||+|||.. +||||||||+|||||+++.+||+||
T Consensus 268 ylVmEy~~GGdL~~~l~~~~--------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DF 336 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG--------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 336 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEecCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEeccc
Confidence 99999999999999997643 488999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|+....... ...+||++|||
T Consensus 337 GlA~~~~~~~~---~t~~GTp~YmA 358 (689)
T 3v5w_A 337 GLACDFSKKKP---HASVGTHGYMA 358 (689)
T ss_dssp TTCEECSSCCC---CSCCSCGGGCC
T ss_pred ceeeecCCCCC---CCccCCcCccC
Confidence 99998754332 34789999998
No 66
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.7e-29 Score=270.07 Aligned_cols=262 Identities=21% Similarity=0.226 Sum_probs=225.4
Q ss_pred cCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhh
Q 035786 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAIS 187 (693)
Q Consensus 108 ~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 187 (693)
.+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+.
T Consensus 45 ~iP~~~---~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 121 (353)
T 2z80_A 45 SIPSGL---TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFK 121 (353)
T ss_dssp SCCTTC---CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHT
T ss_pred cccccc---cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhC
Confidence 456543 46899999999999987777999999999999999999998888999999999999999999976556699
Q ss_pred cCcCCCeeecccccCCCcCc-ccccCCCCCCEEEccCC-cccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccc
Q 035786 188 LLGNLTRLNLASNFFTGQIP-SGLYSLSSIQFLNLSDN-ALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA 265 (693)
Q Consensus 188 ~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 265 (693)
.+++|++|++++|.+++..+ ..+..+++|++|++++| .+++..|..++++++|++|++++|.+++..|..+..+++|+
T Consensus 122 ~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 201 (353)
T 2z80_A 122 PLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVS 201 (353)
T ss_dssp TCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEE
T ss_pred CCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCC
Confidence 99999999999999985433 47899999999999999 57777788999999999999999999999999999999999
Q ss_pred ccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCccccc---CCCCCCEEEccCCcCcc----cCCccCcCCCCCC
Q 035786 266 KLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF---LRPNLRFLDLSRNNITG----SWPILSTNGNASG 338 (693)
Q Consensus 266 ~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~---~~~~L~~L~Ls~N~l~g----~~p~~~~~~~~~l 338 (693)
+|++++|.++ .+|...+..+++|+.|++++|++++..+..+. ..+.++.++|++|.+++ .+|. .+..+++|
T Consensus 202 ~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~-~l~~l~~L 279 (353)
T 2z80_A 202 HLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMK-LLNQISGL 279 (353)
T ss_dssp EEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHH-HHHTCTTC
T ss_pred eecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHH-HHhcccCC
Confidence 9999999986 55655556689999999999999987665443 35778999999999986 3553 34678899
Q ss_pred cEEEccCCccceecCC---CCCCCCCEEEccCCcceeecC
Q 035786 339 AVFNISNNMLYGDLNS---SSFRKFSLIDLSSNYFQGTVA 375 (693)
Q Consensus 339 ~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~l~g~ip 375 (693)
+.|++++|+++ .+|. ..+++|+.|+|++|+++|..|
T Consensus 280 ~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 280 LELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 99999999998 5665 467899999999999998765
No 67
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=3.4e-28 Score=259.13 Aligned_cols=281 Identities=22% Similarity=0.294 Sum_probs=237.9
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.++..+++++.... .+ ..+..+++|++|++++|.+.. +| .+. .+++|++|+|++|.+++.. . +.++
T Consensus 66 ~~L~~L~l~~n~i~---~~------~~~~~l~~L~~L~L~~n~i~~-~~-~~~-~l~~L~~L~l~~n~i~~~~-~-~~~l 131 (347)
T 4fmz_A 66 TNLEYLNLNGNQIT---DI------SPLSNLVKLTNLYIGTNKITD-IS-ALQ-NLTNLRELYLNEDNISDIS-P-LANL 131 (347)
T ss_dssp TTCCEEECCSSCCC---CC------GGGTTCTTCCEEECCSSCCCC-CG-GGT-TCTTCSEEECTTSCCCCCG-G-GTTC
T ss_pred CCccEEEccCCccc---cc------hhhhcCCcCCEEEccCCcccC-ch-HHc-CCCcCCEEECcCCcccCch-h-hccC
Confidence 46788888875322 22 137789999999999998875 45 455 5999999999999998653 3 8999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEc
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 221 (693)
++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+. +. +..+++|+.|++
T Consensus 132 ~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l 206 (347)
T 4fmz_A 132 TKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTA 206 (347)
T ss_dssp TTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEEC
T ss_pred CceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeec
Confidence 9999999999977666554 8999999999999999986544 88999999999999999864 33 889999999999
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCC
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
++|.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++. + .+..+++|+.|++++|++++
T Consensus 207 ~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~--~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 207 YVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-N--AVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G--GGTTCTTCCEEECCSSCCCC
T ss_pred ccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-h--hHhcCCCcCEEEccCCccCC
Confidence 9999987544 8899999999999999997554 89999999999999999863 3 36889999999999999997
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcce
Q 035786 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 302 ~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~ 371 (693)
. ..+..+++|+.|++++|++++..|. .+..+++|+.|++++|++++..|...+++|+.||+++|.|+
T Consensus 280 ~--~~~~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 280 I--SVLNNLSQLNSLFLNNNQLGNEDME-VIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCGGGHH-HHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred C--hhhcCCCCCCEEECcCCcCCCcChh-HhhccccCCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 5 4678899999999999999987664 45678999999999999999888788999999999999985
No 68
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=2.6e-29 Score=265.33 Aligned_cols=184 Identities=36% Similarity=0.623 Sum_probs=159.1
Q ss_pred CccCHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEE
Q 035786 500 DSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCL 577 (693)
Q Consensus 500 ~~~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~ 577 (693)
..+++.++..++++|...+.||+|+||.||+|+..+|+.||||++...... ...|.+|++++.+++|||||+++++|.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 468899999999999999999999999999999888999999999754322 346999999999999999999999987
Q ss_pred cCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 578 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
+ +...++||||+++|+|.++++.... ....++|..+..|+.+++.||+|||+.+.++|+||||||+|||+++++.
T Consensus 98 ~-~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~ 172 (326)
T 3uim_A 98 T-PTERLLVYPYMANGSVASCLRERPE----SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 172 (326)
T ss_dssp C-SSCCEEEEECCTTCBHHHHHHCCST----TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC
T ss_pred c-CCceEEEEEeccCCCHHHHHHhccc----cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC
Confidence 5 4678999999999999999986432 1245999999999999999999999998889999999999999999999
Q ss_pred eEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 658 VRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 658 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+||+|||+++..........+...||+.|+|
T Consensus 173 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~a 203 (326)
T 3uim_A 173 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 203 (326)
T ss_dssp EEECCCSSCEECCSSSSCEECCCCSCGGGCC
T ss_pred EEeccCccccccCcccccccccccCCcCccC
Confidence 9999999999875554444555668888876
No 69
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=7.5e-31 Score=275.77 Aligned_cols=248 Identities=24% Similarity=0.261 Sum_probs=214.3
Q ss_pred CCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcC-CccCccccC-------CCCCCCEEEccCCCCCCcCchhh-
Q 035786 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSL-AGNVPATLG-------ELKKLSNLDLSRNLLTGEIPNAI- 186 (693)
Q Consensus 116 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~- 186 (693)
..++|++|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 367899999999999 788877654 99999999999 456777766 79999999999999999999987
Q ss_pred -hcCcCCCeeecccccCCCcCcccccCC-----CCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCccc--Cchhh
Q 035786 187 -SLLGNLTRLNLASNFFTGQIPSGLYSL-----SSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGS--LPLEL 258 (693)
Q Consensus 187 -~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~ 258 (693)
..+++|++|+|++|.+++. |..+..+ ++|++|+|++|++++..|..|+++++|++|++++|++.+. .|..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 8999999999999999987 8878776 9999999999999998889999999999999999999876 34455
Q ss_pred --hcCccccccccccccccc--cCCCcccCCCCCCCEEEccCCcCCCcCc-ccccCCCCCCEEEccCCcCcccCCccCcC
Q 035786 259 --RGLRNLAKLVISENGLEG--QLSEGLFPTLDQLQVVDLSGNKLDGALP-ATLFLRPNLRFLDLSRNNITGSWPILSTN 333 (693)
Q Consensus 259 --~~l~~L~~L~Ls~N~l~g--~i~~~~~~~l~~L~~L~Ls~N~l~g~~p-~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~ 333 (693)
..+++|++|+|++|++++ .++..++..+++|+.|++++|++++.+| ..+..+++|++|+|++|+|+ .+|....
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-
Confidence 899999999999999983 4455556778999999999999999876 45666899999999999999 7885433
Q ss_pred CCCCCcEEEccCCccceecCCCCCCCCCEEEccCCccee
Q 035786 334 GNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 334 ~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g 372 (693)
.+|+.|++++|++++......+++|+.|+|++|++++
T Consensus 274 --~~L~~L~Ls~N~l~~~p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSCCCTTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCChhHhhCCCCCEEeccCCCCCC
Confidence 7899999999999987333677889999999999976
No 70
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=5.3e-29 Score=258.05 Aligned_cols=209 Identities=29% Similarity=0.325 Sum_probs=146.6
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCC-CCCcCchhhhcCcCCCee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-LTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 195 (693)
.++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4577888888888877666777888888888888888877777777888888888888886 665556777777777777
Q ss_pred ecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 196 NLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 196 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
++++|.+++..|..+..+++|++|++++|++++..+..|+.+++|++|++++|++++..+..+.++++|++|++++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 77777777666777777777777777777777666666777777777777777777655555666666666666666666
Q ss_pred ccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc
Q 035786 276 GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326 (693)
Q Consensus 276 g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~ 326 (693)
+..|.. |..+++|+.|++++|++++..+..+..+++|+.|++++|.+++.
T Consensus 191 ~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 191 HVHPHA-FRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp EECTTT-TTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred ccCHhH-ccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 544433 35566666666666666665555566666666666666666543
No 71
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=2e-28 Score=265.53 Aligned_cols=324 Identities=19% Similarity=0.146 Sum_probs=253.4
Q ss_pred CCCCCCCCCCCCCcceeecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCcc
Q 035786 42 RDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQ 121 (693)
Q Consensus 42 ~~W~~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~ 121 (693)
++|....++|+.|.+..|.-..| .++..... ....+ .-..++.++.++++++.+. .+|+.+...+++|+
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~-~i~~~~~~----~~~~~-----~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~ 72 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDV-HIDMQTQD----VYFGF-----EDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVE 72 (390)
T ss_dssp ---CCEECBCC------EEEESC-EECSSCCC----CEESC-----SSGGGCCCSEEEEESCEES-EECTHHHHHCCCCS
T ss_pred CCCCCccceehhhhhhccceeee-eeeccccc----ccccc-----cccccCCceEEEecCCchh-hCChhHhcccccCc
Confidence 57876666666677766631111 11111100 00000 1235788999999998865 56666444599999
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
+|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..+..+++|++|++++|.
T Consensus 73 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 152 (390)
T 3o6n_A 73 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 152 (390)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCc
Confidence 99999999998888899999999999999999999888899999999999999999995544557899999999999999
Q ss_pred CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCc
Q 035786 202 FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 202 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
+++..|..+..+++|+.|++++|++++. .++.+++|+.|++++|.+++. ...++|++|++++|.++.. |..
T Consensus 153 l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~ 223 (390)
T 3o6n_A 153 LERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP 223 (390)
T ss_dssp CCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC
T ss_pred cCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc
Confidence 9988888899999999999999999875 367789999999999999853 3456899999999999854 433
Q ss_pred ccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC-CCCCCC
Q 035786 282 LFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS-SSFRKF 360 (693)
Q Consensus 282 ~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~-~~~~~l 360 (693)
..++|+.|++++|++++. .++..+++|+.|+|++|++++..|. .+..++.|+.|++++|++++.... ..+++|
T Consensus 224 ---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L 297 (390)
T 3o6n_A 224 ---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH-PFVKMQRLERLYISNNRLVALNLYGQPIPTL 297 (390)
T ss_dssp ---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG-GGTTCSSCCEEECCSSCCCEEECSSSCCTTC
T ss_pred ---ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh-HccccccCCEEECCCCcCcccCcccCCCCCC
Confidence 347899999999999975 5788999999999999999987774 567889999999999999875433 567899
Q ss_pred CEEEccCCcceeecCCCcC-----cccccCCCcCCCC
Q 035786 361 SLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSV 392 (693)
Q Consensus 361 ~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~ 392 (693)
+.|||++|.+++ +|..+. +.+++++|.+...
T Consensus 298 ~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 298 KVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp CEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CEEECCCCccee-cCccccccCcCCEEECCCCcccee
Confidence 999999999984 555443 4678899988765
No 72
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.6e-28 Score=254.45 Aligned_cols=254 Identities=20% Similarity=0.205 Sum_probs=221.6
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 57888888887 456544 479999999999999888889999999999999999999888999999999999999999
Q ss_pred c-CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCC
Q 035786 201 F-FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLS 279 (693)
Q Consensus 201 ~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~ 279 (693)
. ++...|..+..+++|++|++++|++++..|..+.++++|++|++++|++++..+..+..+++|++|++++|++++ ++
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-EC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-cC
Confidence 8 776668899999999999999999999889999999999999999999998888889999999999999999985 55
Q ss_pred CcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCC-CCC
Q 035786 280 EGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSS-SFR 358 (693)
Q Consensus 280 ~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~-~~~ 358 (693)
...|..+++|+.|++++|++++..|..+..+++|+.|++++|++++. |...+..++.|+.|++++|++.++++.. ...
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSAL-PTEALAPLRALQYLRLNDNPWVCDCRARPLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC-CHHHHTTCTTCCEEECCSSCEECSGGGHHHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcC-CHHHcccCcccCEEeccCCCccCCCCcHHHHH
Confidence 55578899999999999999999999999999999999999999964 4345678899999999999999887652 112
Q ss_pred CCCEEEccCCcceeecCCCcC
Q 035786 359 KFSLIDLSSNYFQGTVADDRG 379 (693)
Q Consensus 359 ~l~~ldLs~N~l~g~ip~~~~ 379 (693)
.++.++.+.|.+.+..|..+.
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHHCCSEECCCBEEESGGGT
T ss_pred HHHhcccccCccccCCchHhC
Confidence 344455778888888887653
No 73
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6.3e-28 Score=266.83 Aligned_cols=232 Identities=22% Similarity=0.180 Sum_probs=136.9
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 35556666666665555555666666666666666665555555666666666666666665444445555666666666
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCC-cccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDN-ALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
++|.+++..+..+..+++|+.|++++| .+....+..|.++++|++|++++|++++. | .+..+++|++|+|++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 666655444445556666666666653 33322233455666666666666666543 2 35555666666666666654
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
..|. .|..+++|+.|++++|++++..|..+..+++|+.|+|++|+|++ +|...+..+.+|+.|+|++|.+.+++.
T Consensus 233 ~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 233 IRPG-SFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS-LPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECGG-GGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC-CCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cCcc-cccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc-cChHHhccccCCCEEEccCCCcCCCCC
Confidence 3332 34666666666666666666666666667777777777777763 333445556667777777777766554
No 74
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=1.6e-27 Score=263.19 Aligned_cols=259 Identities=25% Similarity=0.281 Sum_probs=133.2
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+ +|. ..++|++|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ ++|++|+
T Consensus 111 ~~L~~L~l~~n~l~~-l~~----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~ 179 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSD----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIA 179 (454)
T ss_dssp TTCCEEECCSSCCSC-CCS----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEE
T ss_pred CCCcEEECCCCccCc-ccC----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEE
Confidence 445555555555543 221 12456666666666654 45 36666666666666666654 44332 3566666
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
+++|.+++ +| .++.+++|++|++++|.+++ +|... ++|+.|++++|+++ .+| .++.+++|++|++++|++++
T Consensus 180 L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 180 AGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS
T ss_pred CcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc
Confidence 66666654 44 45666666666666666654 33322 35666666666665 445 35666666666666666654
Q ss_pred cCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCc
Q 035786 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILST 332 (693)
Q Consensus 253 ~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~ 332 (693)
+|.. +++|++|++++|++++ +|.. +++|+.|++++|++++. |.. .++|+.|++++|++++ +|.
T Consensus 252 -l~~~---~~~L~~L~l~~N~l~~-l~~~----~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~--- 314 (454)
T 1jl5_A 252 -LPDL---PPSLEALNVRDNYLTD-LPEL----PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCD--- 314 (454)
T ss_dssp -CCSC---CTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECC---
T ss_pred -cccc---ccccCEEECCCCcccc-cCcc----cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccC---
Confidence 3321 2456666666666654 3321 24566666666666541 110 1344444444444443 110
Q ss_pred CCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecCCCcC--cccccCCCcCCC
Q 035786 333 NGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG--RNVSLGRNCLQS 391 (693)
Q Consensus 333 ~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip~~~~--~~~~l~~n~l~g 391 (693)
....|+.|++++|++++ +|. .+++|+.||+++|+++ .+|..+. +.+++++|.+.+
T Consensus 315 -~~~~L~~L~Ls~N~l~~-lp~-~~~~L~~L~L~~N~l~-~lp~~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 315 -LPPSLEELNVSNNKLIE-LPA-LPPRLERLIASFNHLA-EVPELPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp -CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCSS
T ss_pred -CcCcCCEEECCCCcccc-ccc-cCCcCCEEECCCCccc-cccchhhhccEEECCCCCCCc
Confidence 11345555555555554 332 2455555555555555 2444211 234555555555
No 75
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.96 E-value=4.3e-29 Score=282.67 Aligned_cols=164 Identities=18% Similarity=0.244 Sum_probs=142.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|+++|++++|||||++++++.+ +...++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEee
Confidence 4678888999999999999996 46999999999754332 5678999999999999999999998875 5789999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC--CceEECCccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK--FEVRLGSLSELH 667 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~--~~~ki~Dfgla~ 667 (693)
|++|+|.++|.... ..+++.+...|+.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 236 ~~gg~L~~~i~~~~-------~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~ 305 (573)
T 3uto_A 236 MSGGELFEKVADEH-------NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305 (573)
T ss_dssp CCCCBHHHHHTCTT-------SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCE
T ss_pred cCCCcHHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecccee
Confidence 99999999996432 3489999999999999999999998 99999999999999854 899999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+..... .+..+||++|||
T Consensus 306 ~~~~~~~--~~~~~GT~~y~A 324 (573)
T 3uto_A 306 HLDPKQS--VKVTTGTAEFAA 324 (573)
T ss_dssp ECCTTSE--EEEECSSGGGCC
T ss_pred EccCCCc--eeeeEECccccC
Confidence 9854433 456789999997
No 76
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=2.1e-27 Score=273.12 Aligned_cols=141 Identities=26% Similarity=0.338 Sum_probs=127.2
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.++.||+++|.+++-.|..|. .+++|++|||++|.|++..|.+|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~-~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFF-SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCCCCHHHHh-CCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 3689999999999876666776 599999999999999988888999999999999999999988888899999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCC-cCcccccCCCCCCEEEccCCcccccCCccc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTG-QIPSGLYSLSSIQFLNLSDNALTGFIPSEV 234 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 234 (693)
|++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|++++|++++..|..+
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 99999998777789999999999999999976 468889999999999999999887665544
No 77
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.5e-27 Score=262.98 Aligned_cols=232 Identities=22% Similarity=0.193 Sum_probs=161.9
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++++.|+|++|.+++..+..|.++++|++|+|++|.+.+..+..|.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 45677777777777666677777777777777777777666667777777777777777777555556777777777777
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCc-ccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNA-LTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
++|.+++..+..|..+++|+.|+|++|+ +....+..|.++++|++|++++|+++. +| .+..+++|++|+|++|.+++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCc
Confidence 7777766555567777777777777743 333333456777777777777777763 34 36677777777777777775
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
..|. .|..+++|+.|++++|++++..|..+..+++|+.|+|++|+|++ +|...+..+..|+.|+|++|.|.+++.
T Consensus 222 ~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 222 IRPG-SFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL-LPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp ECTT-TTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC-CCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChh-hhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc-cChhHhccccCCCEEEcCCCCccCCCC
Confidence 4443 45777778888888888877777777777888888888888874 443455666777778888887777654
No 78
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=2.2e-27 Score=262.07 Aligned_cols=260 Identities=23% Similarity=0.303 Sum_probs=200.4
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|++|++++|.+.+ +| .++ .+++|++|++++|.+++ +|..+ .+|++|++++|.+++ +| .++++++|++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~-~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQ-NSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCT-TCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc-ccC-CCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 689999999999987 88 465 59999999999999986 66544 589999999999997 66 699999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
+++|.+++ +|... ++|++|++++|.++ .+|. ++.+++|++|++++|++++ +|.. +++|++|++++|++++
T Consensus 202 l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD 271 (454)
T ss_dssp CCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC
T ss_pred CCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc
Confidence 99999986 55432 58999999999998 6774 8999999999999999986 5543 4789999999999987
Q ss_pred cCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCc
Q 035786 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILST 332 (693)
Q Consensus 253 ~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~ 332 (693)
+|.. +++|++|++++|.+++ +|. ..++|+.|++++|++++. +. ..++|+.|++++|++++ +|..
T Consensus 272 -l~~~---~~~L~~L~ls~N~l~~-l~~----~~~~L~~L~l~~N~l~~i-~~---~~~~L~~L~Ls~N~l~~-lp~~-- 335 (454)
T 1jl5_A 272 -LPEL---PQSLTFLDVSENIFSG-LSE----LPPNLYYLNASSNEIRSL-CD---LPPSLEELNVSNNKLIE-LPAL-- 335 (454)
T ss_dssp -CCCC---CTTCCEEECCSSCCSE-ESC----CCTTCCEEECCSSCCSEE-CC---CCTTCCEEECCSSCCSC-CCCC--
T ss_pred -cCcc---cCcCCEEECcCCccCc-ccC----cCCcCCEEECcCCcCCcc-cC---CcCcCCEEECCCCcccc-cccc--
Confidence 5543 4789999999999986 222 125788899999988862 21 12588899999998886 6632
Q ss_pred CCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCccee--ecCCCcC------------------cccccCCCcCCC
Q 035786 333 NGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG--TVADDRG------------------RNVSLGRNCLQS 391 (693)
Q Consensus 333 ~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g--~ip~~~~------------------~~~~l~~n~l~g 391 (693)
+..|+.|++++|++++ +|. .+++|+.||+++|+++| .+|.++. +.+++++|.+++
T Consensus 336 --~~~L~~L~L~~N~l~~-lp~-~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 336 --PPRLERLIASFNHLAE-VPE-LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp --CTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------
T ss_pred --CCcCCEEECCCCcccc-ccc-hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 4778889999998884 665 67788899999999888 7776653 245667777766
No 79
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.95 E-value=1.9e-28 Score=258.33 Aligned_cols=179 Identities=34% Similarity=0.520 Sum_probs=148.9
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
+++.++..++++|...+.||+|+||.||+|+..+|+.||||++...... .+.|.+|++++++++|||||+++++|.+ +
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~ 107 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-R 107 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-T
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C
Confidence 3444555678899999999999999999999888999999998765433 5689999999999999999999999875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
+..++||||+++|+|.++++.... ....++|.++.+++.++++||+|||.. +|+||||||+||++++++.+||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl 180 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDL----PTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKI 180 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCC----CSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEE
T ss_pred CeEEEEEEcCCCCcHHHHHhccCC----CccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEE
Confidence 678999999999999999975432 124599999999999999999999998 9999999999999999999999
Q ss_pred CCcccccccCCCC-cceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSH-QNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~-~~~~~~~~~~~~y~a 688 (693)
+|||+++...... ....+...||+.|+|
T Consensus 181 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a 209 (321)
T 2qkw_B 181 TDFGISKKGTELDQTHLSTVVKGTLGYID 209 (321)
T ss_dssp CCCTTCEECSSSSCCCCBCCCEEETTTCC
T ss_pred eecccccccccccccccccccCCCccccC
Confidence 9999998764322 222333456777765
No 80
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.95 E-value=1.4e-28 Score=269.76 Aligned_cols=174 Identities=18% Similarity=0.188 Sum_probs=148.0
Q ss_pred HHHHHHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEc
Q 035786 504 YEQLLRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLE 578 (693)
Q Consensus 504 ~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~ 578 (693)
+.++...+++|...++||+|+||+||+|+.. +++.||||++.... ...+.+.+|++++.+++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444556778999999999999999999975 48899999996422 123458999999999999999999998875
Q ss_pred CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 579 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
++..++|||||++|+|.++++... ..+++.....++.+++.||+|||.. +||||||||+|||+|+++.+
T Consensus 146 -~~~~~lV~Ey~~gg~L~~~l~~~~-------~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~v 214 (437)
T 4aw2_A 146 -DNNLYLVMDYYVGGDLLTLLSKFE-------DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHI 214 (437)
T ss_dssp -SSEEEEEECCCTTCBHHHHHHTTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred -CCEEEEEEecCCCCcHHHHHHHcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCE
Confidence 468999999999999999997532 3489999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++..........+..+||++|+|
T Consensus 215 kL~DFGla~~~~~~~~~~~~~~~GT~~Y~A 244 (437)
T 4aw2_A 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYIS 244 (437)
T ss_dssp EECCCTTCEECCTTSCEECCSCCSCGGGCC
T ss_pred EEcchhhhhhcccCCCcccccccCCcCeeC
Confidence 999999998875544433455788988887
No 81
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2e-27 Score=262.83 Aligned_cols=230 Identities=24% Similarity=0.226 Sum_probs=208.9
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFR-HLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTT-TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCccEEECcCCcCceECHHHcC-CCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 5789999999999988888886 499999999999999999999999999999999999999988788899999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCc-ccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP-SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
|++|.++...+..+..+++|++|++++|...+.+| ..+..+++|++|+|++|++++. | .+..+++|++|+|++|.++
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCc
Confidence 99999997777789999999999999965544555 4688999999999999999964 5 5889999999999999999
Q ss_pred ccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc
Q 035786 252 GSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326 (693)
Q Consensus 252 g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~ 326 (693)
+..|..|.++++|++|+|++|++++..+. .|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+...
T Consensus 232 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERN-AFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred ccCcccccCccCCCEEEeCCCcCceECHH-HhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 99999999999999999999999976554 468999999999999999988888888999999999999998743
No 82
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.95 E-value=7.3e-28 Score=254.02 Aligned_cols=175 Identities=19% Similarity=0.253 Sum_probs=148.7
Q ss_pred CccCHHHHHHHhCC----------CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCC
Q 035786 500 DSFTYEQLLRATGN----------FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHA 567 (693)
Q Consensus 500 ~~~~~~~l~~at~~----------~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~ 567 (693)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++...... .+.|.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 36889999888875 455678999999999999975 7999999999764433 57799999999999999
Q ss_pred CccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCC
Q 035786 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647 (693)
Q Consensus 568 niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~ 647 (693)
|||+++++|.. ++..++||||+++|+|.+++.. ..++|..+..++.++++||+|||+. +|+||||||
T Consensus 103 niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~---------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp 169 (321)
T 2c30_A 103 NVVEMYKSYLV-GEELWVLMEFLQGGALTDIVSQ---------VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKS 169 (321)
T ss_dssp TBCCEEEEEEE-TTEEEEEECCCCSCBHHHHHTT---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred CcceEEEEEEE-CCEEEEEEecCCCCCHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCH
Confidence 99999999876 4689999999999999999864 2489999999999999999999998 999999999
Q ss_pred CCeeeCCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 648 SSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 648 ~NILld~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+||+++.++.+||+|||+++........ .....||+.|+|
T Consensus 170 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~a 209 (321)
T 2c30_A 170 DSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMA 209 (321)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCC
T ss_pred HHEEECCCCcEEEeeeeeeeecccCccc-cccccCCccccC
Confidence 9999999999999999999887443221 334567777765
No 83
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=7e-27 Score=257.52 Aligned_cols=247 Identities=22% Similarity=0.212 Sum_probs=218.7
Q ss_pred ccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 120 L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
.+.++.+++.++ .+|..+. ++++.|+|++|++.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 456777777776 5676664 6899999999999998889999999999999999999988889999999999999999
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCc-CcccCchhhhcCccccccccccccccccC
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS-ISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
|.+++..+..|..+++|++|+|++|+++...+..|.++++|++|++++|+ ++...+..|.++++|++|+|++|+++ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc
Confidence 99997777789999999999999999998888899999999999999954 55444557999999999999999998 45
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CC
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SS 356 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~ 356 (693)
|. +..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..| ..+..+.+|+.|+|++|++++..+. ..
T Consensus 201 ~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 201 PN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER-NAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp CC--CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT-TSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred cc--cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh-hhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 64 5789999999999999999999999999999999999999997666 4677889999999999999975554 56
Q ss_pred CCCCCEEEccCCcceee
Q 035786 357 FRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 357 ~~~l~~ldLs~N~l~g~ 373 (693)
+++|+.|+|++|.+...
T Consensus 278 l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CTTCCEEECCSSCEECS
T ss_pred ccCCCEEEcCCCCccCC
Confidence 78999999999999764
No 84
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.95 E-value=3.9e-28 Score=264.09 Aligned_cols=170 Identities=16% Similarity=0.174 Sum_probs=145.1
Q ss_pred HHHHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 506 QLLRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 506 ~l~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
++....++|...++||+|+||+||+|+.. +++.||||++.... ...+.+.+|++++..++|||||+++++|.+ +
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD-D 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-S
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-C
Confidence 34445677888999999999999999975 58999999986422 224568899999999999999999998875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++|||||++|+|.++++.. .+++.....++.+++.||+|||+. +|+||||||+|||+|+++.+||
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~---------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL 209 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY---------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKL 209 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEE
Confidence 6889999999999999999752 388999999999999999999998 9999999999999999999999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++.............+||+.|+|
T Consensus 210 ~DFG~a~~~~~~~~~~~~~~~gt~~Y~A 237 (410)
T 3v8s_A 210 ADFGTCMKMNKEGMVRCDTAVGTPDYIS 237 (410)
T ss_dssp CCCTTCEECCTTSEEECCSCCSCGGGCC
T ss_pred eccceeEeeccCCcccccCCcCCccccC
Confidence 9999999875544333445789999987
No 85
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=264.47 Aligned_cols=174 Identities=17% Similarity=0.159 Sum_probs=147.1
Q ss_pred HHHHHHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEc
Q 035786 504 YEQLLRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLE 578 (693)
Q Consensus 504 ~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~ 578 (693)
+.+.....++|...++||+|+||+||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444445678999999999999999999974 69999999996532 123468899999999999999999998875
Q ss_pred CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 579 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
++..|+|||||++|+|.+++++.. ..+++.....++.+|+.||+|||+. +||||||||+|||+|+++.+
T Consensus 133 -~~~~~lVmE~~~gg~L~~~l~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~v 201 (412)
T 2vd5_A 133 -ENYLYLVMEYYVGGDLLTLLSKFG-------ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHI 201 (412)
T ss_dssp -SSEEEEEECCCCSCBHHHHHHHHS-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred -CCEEEEEEcCCCCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCE
Confidence 468899999999999999997532 2489999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++.............+||++|+|
T Consensus 202 kL~DFGla~~~~~~~~~~~~~~~Gt~~Y~A 231 (412)
T 2vd5_A 202 RLADFGSCLKLRADGTVRSLVAVGTPDYLS 231 (412)
T ss_dssp EECCCTTCEECCTTSCEECSSCCSCGGGCC
T ss_pred EEeechhheeccCCCccccceeccccCcCC
Confidence 999999999875443333344688999987
No 86
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.95 E-value=1.3e-27 Score=252.78 Aligned_cols=164 Identities=18% Similarity=0.274 Sum_probs=141.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++++++|||||++++++.+ ++..++|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-EKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEE
Confidence 34677889999999999999996 57999999999754333 4578899999999999999999999875 5689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~e~~~~~~L~~~l~~~~--------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 161 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG--------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS 161 (328)
T ss_dssp ECCCTTCBHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCC
T ss_pred EECCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCc
Confidence 99999999999997543 489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .+..+||++|+|
T Consensus 162 ~~~~~~~~--~~~~~gt~~y~a 181 (328)
T 3fe3_A 162 NEFTVGGK--LDAFCGAPPYAA 181 (328)
T ss_dssp GGGSSSCG--GGTTSSSGGGCC
T ss_pred eecCCCCc--cccccCCcceeC
Confidence 87643322 344678888876
No 87
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.95 E-value=2.1e-27 Score=248.94 Aligned_cols=165 Identities=17% Similarity=0.342 Sum_probs=138.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+|...+.||+|+||.||+|+.. +|+.||||++..... ..+.|.+|++++.+++|||||+++++|.+ +...++||||+
T Consensus 11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~ 89 (310)
T 3s95_A 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYI 89 (310)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-CCeeEEEEEec
Confidence 4667789999999999999974 689999999855332 35689999999999999999999999986 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++... ..++|.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 90 ~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 90 KGGTLRGIIKSMD-------SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp TTCBHHHHHHHCC-------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred CCCcHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 9999999997632 3589999999999999999999998 89999999999999999999999999999873
Q ss_pred CCCcce-------------eeeeehhhhhhh
Q 035786 671 DSHQNV-------------LTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~-------------~~~~~~~~~y~a 688 (693)
...... ....+||+.|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 190 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190 (310)
T ss_dssp --------------------CCCCSCGGGCC
T ss_pred cccccccccccccccccccccccCCCcceeC
Confidence 322211 113567888876
No 88
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.95 E-value=4.7e-27 Score=245.79 Aligned_cols=179 Identities=32% Similarity=0.543 Sum_probs=151.7
Q ss_pred CccCHHHHHHHhCCCCcc------CccccCCeeeEEEEEeCCCcEEEEEEecccc----cC-HHHHHHHHHHHhcCCCCC
Q 035786 500 DSFTYEQLLRATGNFSET------NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHS----FK-KESYMMELDLFSRVSHAR 568 (693)
Q Consensus 500 ~~~~~~~l~~at~~~~~~------~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~----~~-~~~f~~Ei~~l~~l~H~n 568 (693)
..|++.++..++++|+.. +.||+|+||.||+|+. +++.||||++.... .. .+.|.+|++++.+++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999988 8999999999999987 58899999986432 11 467999999999999999
Q ss_pred ccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCC
Q 035786 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQAS 648 (693)
Q Consensus 569 iv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~ 648 (693)
|+++++++.+ ++..++||||+++|+|.+++..... ...++|..+..++.+++.||+|||.. +|+||||||+
T Consensus 92 i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~ 162 (307)
T 2nru_A 92 LVELLGFSSD-GDDLCLVYVYMPNGSLLDRLSCLDG-----TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSA 162 (307)
T ss_dssp BCCEEEEECS-SSSCEEEEECCTTCBHHHHHHTGGG-----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGG
T ss_pred eEEEEEEEec-CCceEEEEEecCCCcHHHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHH
Confidence 9999999875 4678999999999999999974321 24599999999999999999999998 9999999999
Q ss_pred CeeeCCCCceEECCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 649 SILLDDKFEVRLGSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 649 NILld~~~~~ki~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
||++++++.+||+|||+++........ ......||+.|+|
T Consensus 163 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~a 203 (307)
T 2nru_A 163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMA 203 (307)
T ss_dssp GEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCC
T ss_pred HEEEcCCCcEEEeecccccccccccccccccccCCCcCcCC
Confidence 999999999999999999887543322 2233567777765
No 89
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.4e-27 Score=254.22 Aligned_cols=166 Identities=14% Similarity=0.189 Sum_probs=135.5
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++.+++|||||++++++.+ .+..++||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~~~~lv~ 87 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-ANKIFMVL 87 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEEE
Confidence 35677889999999999999995 57999999999754422 4578999999999999999999998875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 88 E~~~gg~L~~~l~~~~--------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~ 156 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD--------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCA 156 (347)
T ss_dssp ECCTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred eCCCCCCHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcc
Confidence 9999999999997542 489999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
.............+||++|+|
T Consensus 157 ~~~~~~~~~~~~~~gt~~y~a 177 (347)
T 3zgw_A 157 KPKGNKDYHLQTCCGSLAYAA 177 (347)
T ss_dssp C--------------CGGGCC
T ss_pred cccCCCCccccccCCccCccC
Confidence 875444333455678888876
No 90
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.94 E-value=8.1e-28 Score=253.75 Aligned_cols=167 Identities=18% Similarity=0.286 Sum_probs=138.6
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCC---CeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE---TEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~---~~~~lv~e 588 (693)
++|...++||+|+||.||+|+.. ++.||||++.........+.+|++++.+++|||||+++++|.+.. ...++|||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 45777889999999999999886 789999999765555556778999999999999999999987532 23689999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-------CCCeEecCCCCCCeeeCCCCceEEC
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-------NPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-------~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
|+++|+|.++++. ..++|..+..|+.|+++||+|||+.+ .++|+||||||+|||+++++.+||+
T Consensus 103 ~~~~g~L~~~l~~---------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 103 FHEKGSLSDFLKA---------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp CCTTCBHHHHHHH---------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred cCCCCCHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999975 24899999999999999999999862 4589999999999999999999999
Q ss_pred CcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
|||+++........ ..+...||+.|+|
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~a 201 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMA 201 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCC
T ss_pred cCCcccccccccCccccccCccCccccC
Confidence 99999886432221 1223456777765
No 91
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.94 E-value=5e-27 Score=244.76 Aligned_cols=163 Identities=20% Similarity=0.321 Sum_probs=141.1
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++.+++|||||++++++.. ++..++||||
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~ 98 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEY 98 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-CCEEEEEEEC
Confidence 4588889999999999999985 5789999999865443 36679999999999999999999999876 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 99 ~~~~~L~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (297)
T 3fxz_A 99 LAGGSLTDVVTET---------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (297)
T ss_dssp CTTCBHHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHhhc---------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999999999752 489999999999999999999998 9999999999999999999999999999887
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....+||+.|+|
T Consensus 167 ~~~~~~-~~~~~gt~~y~a 184 (297)
T 3fxz_A 167 TPEQSK-RSTMVGTPYWMA 184 (297)
T ss_dssp CSTTCC-BCCCCSCGGGCC
T ss_pred CCcccc-cCCccCCcCccC
Confidence 443332 334568888876
No 92
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.94 E-value=3.4e-27 Score=249.25 Aligned_cols=169 Identities=21% Similarity=0.325 Sum_probs=138.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHET------- 581 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~------- 581 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.|.+|++++++++|||||+++++|.+.+.
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45777889999999999999975 7999999999754332 5689999999999999999999999865322
Q ss_pred -------------------------------------------------eeEEEEccCCCCChhhhhhccCCCCCCCCCC
Q 035786 582 -------------------------------------------------EKLLVYKYMVCGDLASSLHRVTDLEDDSLQS 612 (693)
Q Consensus 582 -------------------------------------------------~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~ 612 (693)
..++||||+++|+|.+++..... ...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-----~~~ 160 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-----LED 160 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-----GGG
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-----ccc
Confidence 26899999999999999986432 234
Q ss_pred CCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCCCc-----------ceeeeee
Q 035786 613 LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQ-----------NVLTRFL 681 (693)
Q Consensus 613 l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~~~-----------~~~~~~~ 681 (693)
.+|..+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...+...
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 68888999999999999999998 999999999999999999999999999998744321 1123356
Q ss_pred hhhhhhh
Q 035786 682 WRQLYQS 688 (693)
Q Consensus 682 ~~~~y~a 688 (693)
||+.|+|
T Consensus 238 gt~~y~a 244 (332)
T 3qd2_B 238 GTKLYMS 244 (332)
T ss_dssp -CGGGSC
T ss_pred CCcCccC
Confidence 7888875
No 93
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.94 E-value=1.2e-27 Score=264.64 Aligned_cols=149 Identities=18% Similarity=0.331 Sum_probs=134.5
Q ss_pred hCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.++|...+.||+|+||.||+|++.++..||||++.......++|.+|+++|++++|||||+++++|. ++..++|||||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT--KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe--CCccEEEEeec
Confidence 4457778899999999999999988999999999876666788999999999999999999999885 35789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++.... ..+++.++.+++.+||.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 265 ~~g~L~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 265 AKGSLLDFLKSDEG------SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp TTCBHHHHHHSHHH------HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred CCCcHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999975321 2488999999999999999999998 89999999999999999999999999999864
No 94
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.94 E-value=2.1e-27 Score=243.64 Aligned_cols=147 Identities=23% Similarity=0.395 Sum_probs=133.8
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|+..+++.||||++.......++|.+|++++.+++||||+++++++.+ +...++||||+++
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEH 89 (269)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEEECCTT
T ss_pred hceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCceEEEEEeCCC
Confidence 466778999999999999999889999999998776667889999999999999999999999875 4678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.++++... ..+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~~L~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 157 (269)
T 4hcu_A 90 GCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 157 (269)
T ss_dssp CBHHHHHHTTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CcHHHHHHhcC-------cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccc
Confidence 99999997532 3589999999999999999999998 89999999999999999999999999998763
No 95
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.8e-28 Score=258.12 Aligned_cols=265 Identities=20% Similarity=0.190 Sum_probs=202.2
Q ss_pred CCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEcc
Q 035786 95 LSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLS 174 (693)
Q Consensus 95 L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 174 (693)
++..+++.+.+...+ ..+...+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..| +..+++|++|+|+
T Consensus 12 l~i~~ls~~~l~~~~-~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQAL-ASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHH-HHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhH-HHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 344455555554332 3333457789999999999998878889999999999999999987655 8889999999999
Q ss_pred CCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccC
Q 035786 175 RNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSL 254 (693)
Q Consensus 175 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 254 (693)
+|.+++. | ..++|++|++++|.+++..+. .+++|+.|++++|++++..|..++.+++|++|++++|.+++..
T Consensus 89 ~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-L----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-E----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-c----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9988743 2 347899999999999876544 3678999999999999888888888999999999999999877
Q ss_pred chhh-hcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcC
Q 035786 255 PLEL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTN 333 (693)
Q Consensus 255 p~~~-~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~ 333 (693)
|..+ ..+++|++|+|++|.+++. +.. ..+++|+.|++++|++++. |..+..+++|+.|+|++|+|+ .+|. .+.
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~~~--~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~-~~~ 234 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-KGQ--VVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEK-ALR 234 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-ECC--CCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECT-TCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-ccc--cccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhh-Hhh
Confidence 7776 4788999999999998865 332 3478899999999999865 445888899999999999998 4664 356
Q ss_pred CCCCCcEEEccCCccc-eecCC--CCCCCCCEEEcc-CCcceeecCC
Q 035786 334 GNASGAVFNISNNMLY-GDLNS--SSFRKFSLIDLS-SNYFQGTVAD 376 (693)
Q Consensus 334 ~~~~l~~l~ls~N~l~-g~~~~--~~~~~l~~ldLs-~N~l~g~ip~ 376 (693)
.++.|+.|++++|.+. +.+|. ..+++|+.++++ .+.++|..|.
T Consensus 235 ~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 6778888888888887 33332 345566667776 3455665443
No 96
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.94 E-value=5.1e-27 Score=249.01 Aligned_cols=164 Identities=17% Similarity=0.189 Sum_probs=140.4
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccc----ccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLH----SFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~----~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||+||+|+.. +|+.||||.+... ....+.+.+|++++.+++|||||++++++.+ ++..++|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-CCEEEEE
Confidence 45777889999999999999974 6899999999653 2235678999999999999999999998875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++.+...++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 84 ~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 152 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER--------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLC 152 (337)
T ss_dssp EECCTTCBHHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EeCCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccch
Confidence 99999999999997532 489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+||+.|+|
T Consensus 153 ~~~~~~~~-~~~~~~gt~~y~a 173 (337)
T 1o6l_A 153 KEGISDGA-TMKTFCGTPEYLA 173 (337)
T ss_dssp BCSCCTTC-CBCCCEECGGGCC
T ss_pred hhcccCCC-cccccccChhhCC
Confidence 87532222 1344678888886
No 97
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.94 E-value=2.3e-27 Score=265.16 Aligned_cols=150 Identities=21% Similarity=0.415 Sum_probs=135.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCC-CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.+|...+.||+|+||.||+|++.. +..||||++.......++|.+|+++|++++|||||+++++|.+ +...++|||||
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEec-CCcEEEEEEcc
Confidence 456778899999999999999864 8899999998766667889999999999999999999999975 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++.... ..+++..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 299 ~~g~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 299 TYGNLLDYLRECNR------QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp TTCBHHHHHHHSCT------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred CCCCHHHHHHhcCc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999976432 3589999999999999999999998 99999999999999999999999999999874
Q ss_pred C
Q 035786 671 D 671 (693)
Q Consensus 671 ~ 671 (693)
.
T Consensus 370 ~ 370 (495)
T 1opk_A 370 G 370 (495)
T ss_dssp T
T ss_pred C
Confidence 3
No 98
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.94 E-value=5.1e-27 Score=240.48 Aligned_cols=166 Identities=20% Similarity=0.321 Sum_probs=141.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+..++..||||++.......+++.+|++++.+++||||++++++|.+ +...++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-EYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCceEEEEEccC
Confidence 3467778999999999999999988899999998776677889999999999999999999998864 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 87 ~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 87 NGCLLNYLRSHG-------KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp TCBHHHHHHHHG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred CCcHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 999999997532 3489999999999999999999998 999999999999999999999999999998744
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
..........+++.|+|
T Consensus 157 ~~~~~~~~~~~~~~y~a 173 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSA 173 (268)
T ss_dssp TCEEECCSCCCCGGGCC
T ss_pred hhhhcccCCCcCcccCC
Confidence 33222222334444543
No 99
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=5.5e-26 Score=233.47 Aligned_cols=213 Identities=28% Similarity=0.353 Sum_probs=141.8
Q ss_pred CCCCcceeec-CCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCC
Q 035786 51 CRSWRGVQCQ-NGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCS 129 (693)
Q Consensus 51 C~~W~gv~C~-~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~ 129 (693)
||.|.|+.|+ .+.++.+++++ +.+. .+|..+ .++|++|+|++|.
T Consensus 4 ~C~~~~~~C~c~~~~~~l~~~~-------------------------------~~l~-~ip~~~---~~~l~~L~l~~n~ 48 (270)
T 2o6q_A 4 LCKKDGGVCSCNNNKNSVDCSS-------------------------------KKLT-AIPSNI---PADTKKLDLQSNK 48 (270)
T ss_dssp CBGGGTCSBEEETTTTEEECTT-------------------------------SCCS-SCCSCC---CTTCSEEECCSSC
T ss_pred cCCCCCCCCEeCCCCCEEEccC-------------------------------CCCC-ccCCCC---CCCCCEEECcCCC
Confidence 4589999995 33444555544 3333 245433 3568888888888
Q ss_pred CCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCccc
Q 035786 130 LSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG 209 (693)
Q Consensus 130 l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 209 (693)
+++..+..|+++++|++|+|++|.++...+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+++..|..
T Consensus 49 l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 128 (270)
T 2o6q_A 49 LSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRV 128 (270)
T ss_dssp CSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTT
T ss_pred CCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHH
Confidence 88776778888888888888888888665666778888888888888887666666777777777777777777666666
Q ss_pred ccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCC
Q 035786 210 LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQL 289 (693)
Q Consensus 210 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L 289 (693)
+..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..|.++++|++|+|++|++++ ++...|..+++|
T Consensus 129 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L 207 (270)
T 2o6q_A 129 FDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR-VPEGAFDSLEKL 207 (270)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTC
T ss_pred hCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc-CCHHHhccccCC
Confidence 7777777777777777776555556777777777777777765555445555555555555555542 333333444444
Q ss_pred CEEEccCCcC
Q 035786 290 QVVDLSGNKL 299 (693)
Q Consensus 290 ~~L~Ls~N~l 299 (693)
+.|++++|.+
T Consensus 208 ~~L~l~~N~~ 217 (270)
T 2o6q_A 208 KMLQLQENPW 217 (270)
T ss_dssp CEEECCSSCB
T ss_pred CEEEecCCCe
Confidence 4444444444
No 100
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=1.1e-26 Score=245.04 Aligned_cols=164 Identities=12% Similarity=0.192 Sum_probs=142.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|...+.||+|+||.||+|+.. +|+.||+|.+.......+.+.+|++++..++|||||++++++.+ ++..++||||+
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e~~ 83 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES-MEELVMIFEFI 83 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEECCC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEec-CCEEEEEEEeC
Confidence 45777889999999999999974 68999999997655556678999999999999999999999875 46899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC--CCceEECCcccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD--KFEVRLGSLSELHA 668 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~--~~~~ki~Dfgla~~ 668 (693)
++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 84 ~g~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 84 SGLDIFERINTSA-------FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp CCCBHHHHHTSSS-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred CCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 9999999996432 3589999999999999999999998 9999999999999997 78999999999998
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....+||++|+|
T Consensus 154 ~~~~~~--~~~~~gt~~y~a 171 (321)
T 1tki_A 154 LKPGDN--FRLLFTAPEYYA 171 (321)
T ss_dssp CCTTCE--EEEEESCGGGSC
T ss_pred CCCCCc--cccccCChhhcC
Confidence 754332 455778888876
No 101
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.94 E-value=3.3e-27 Score=253.50 Aligned_cols=169 Identities=12% Similarity=0.153 Sum_probs=139.3
Q ss_pred hCCCCccCccccCCeeeEEEEE------eCCCcEEEEEEecccccCHHHHHHHHHHHhcCC---CCCccceeEEEEcCCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGT------LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS---HARLVPLLGQCLEHET 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~------~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~---H~niv~l~g~~~~~~~ 581 (693)
.+.|...+.||+|+||.||+|+ ..+++.||||++... ..++|.+|++++.+++ |+||+++++++.. ++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~-~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF-QN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-SS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-CC
Confidence 3557778899999999999994 456889999998643 3567888999988887 9999999999876 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-------
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD------- 654 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~------- 654 (693)
..++|||||++|+|.++++..... ....++|..+..|+.|+++||+|||+. +||||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNT---PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTS---TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred CcEEEEeccCCCcHHHHHHHhhcc---cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 789999999999999999753211 124599999999999999999999998 8999999999999998
Q ss_pred ----CCceEECCcccccccCC-CCcceeeeeehhhhhhh
Q 035786 655 ----KFEVRLGSLSELHAQGD-SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 655 ----~~~~ki~Dfgla~~~~~-~~~~~~~~~~~~~~y~a 688 (693)
++.+||+|||+++.... ......+..+||++|||
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a 253 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQC 253 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCC
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCC
Confidence 89999999999987532 22223455678888876
No 102
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.94 E-value=9.1e-27 Score=246.06 Aligned_cols=148 Identities=20% Similarity=0.376 Sum_probs=129.0
Q ss_pred CCCccCccccCCeeeEEEEEeC----CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.|...+.||+|+||.||+|+.. .+..||||++..... ..++|.+|++++.+++|||||+++++|.+ ++..++|
T Consensus 50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 128 (325)
T 3kul_A 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-GRLAMIV 128 (325)
T ss_dssp GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-GGCCEEE
T ss_pred HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCccEEE
Confidence 3556689999999999999974 345699999975432 25679999999999999999999999865 4578999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++... ..+++.++..|+.+++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 129 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 198 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD-------GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLS 198 (325)
T ss_dssp EECCTTCBHHHHHHTTT-------TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred eeCCCCCcHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcc
Confidence 99999999999997532 3589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCC
Q 035786 667 HAQGD 671 (693)
Q Consensus 667 ~~~~~ 671 (693)
+....
T Consensus 199 ~~~~~ 203 (325)
T 3kul_A 199 RVLED 203 (325)
T ss_dssp EECC-
T ss_pred ccccc
Confidence 98743
No 103
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.94 E-value=3.4e-27 Score=254.17 Aligned_cols=149 Identities=22% Similarity=0.393 Sum_probs=124.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC----CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.+|...+.||+|+||.||+|+.. ++..||||++..... ..++|.+|++++++++|||||+++++|.+ +...++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCceEE
Confidence 35788899999999999999864 477899999975432 25679999999999999999999999875 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..++|.++..|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 124 v~e~~~~~sL~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 193 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGL 193 (373)
T ss_dssp EEECCTTCBHHHHHHTTT-------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--
T ss_pred EEeCCCCCcHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcc
Confidence 999999999999997532 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCC
Q 035786 666 LHAQGD 671 (693)
Q Consensus 666 a~~~~~ 671 (693)
++....
T Consensus 194 a~~~~~ 199 (373)
T 2qol_A 194 GRVLED 199 (373)
T ss_dssp ------
T ss_pred cccccc
Confidence 998743
No 104
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=5.8e-26 Score=258.80 Aligned_cols=283 Identities=25% Similarity=0.292 Sum_probs=227.9
Q ss_pred CCCCCCCCCCCCCcceee--------cCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHh
Q 035786 42 RDWPLRTEPCRSWRGVQC--------QNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWF 113 (693)
Q Consensus 42 ~~W~~~~~~C~~W~gv~C--------~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~ 113 (693)
++|.... +||.|+|..| ....++.+++++... ..+|.. +. ++|+.|++++|.+. .+|.
T Consensus 13 ~~W~~~~-~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L---~~lp~~-----l~--~~L~~L~L~~N~l~-~lp~-- 78 (622)
T 3g06_A 13 SAWRRAA-PAEESRGRAAVVQKMRACLNNGNAVLNVGESGL---TTLPDC-----LP--AHITTLVIPDNNLT-SLPA-- 78 (622)
T ss_dssp HHHHHTC-CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCC---SCCCSC-----CC--TTCSEEEECSCCCS-CCCC--
T ss_pred HHHHhcC-CcchhccccccCcccccccCCCCcEEEecCCCc---CccChh-----hC--CCCcEEEecCCCCC-CCCC--
Confidence 3575434 4668977533 234688999987653 245542 22 78999999999988 6776
Q ss_pred hhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCC
Q 035786 114 GYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT 193 (693)
Q Consensus 114 ~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 193 (693)
.+++|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. .+++|++|++++|++++ +|.. +++|+
T Consensus 79 --~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~ 144 (622)
T 3g06_A 79 --LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQ 144 (622)
T ss_dssp --CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCC
T ss_pred --cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCC
Confidence 38999999999999984 665 68999999999999986 454 67899999999999985 6654 48999
Q ss_pred eeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccc
Q 035786 194 RLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENG 273 (693)
Q Consensus 194 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 273 (693)
+|++++|.+++ +|. .+++|+.|++++|++++ +| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.
T Consensus 145 ~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~ 212 (622)
T 3g06_A 145 ELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNR 212 (622)
T ss_dssp EEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCc
Confidence 99999999985 554 35789999999999996 56 457899999999999996 444 35789999999999
Q ss_pred ccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 274 LEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 274 l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
++ .+|. .+++|+.|++++|++++ +| ..+++|+.|+|++|+|+ .+|. .+.+|+.|+|++|+++ .+|
T Consensus 213 l~-~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~----~~~~L~~L~Ls~N~L~-~lp 277 (622)
T 3g06_A 213 LT-SLPA----LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM----LPSGLLSLSVYRNQLT-RLP 277 (622)
T ss_dssp CS-SCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCC-SCC
T ss_pred cc-ccCC----CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc----ccccCcEEeCCCCCCC-cCC
Confidence 98 4553 34789999999999997 55 45689999999999998 5774 5678999999999999 666
Q ss_pred C--CCCCCCCEEEccCCcceeecCCCcC
Q 035786 354 S--SSFRKFSLIDLSSNYFQGTVADDRG 379 (693)
Q Consensus 354 ~--~~~~~l~~ldLs~N~l~g~ip~~~~ 379 (693)
. ..+++|+.|+|++|+++|.+|..+.
T Consensus 278 ~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 278 ESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp GGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred HHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 5 5678999999999999998887543
No 105
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.94 E-value=5.7e-27 Score=250.27 Aligned_cols=165 Identities=19% Similarity=0.231 Sum_probs=136.5
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 584 (693)
.++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++..+ +|||||++++++.+ ++..+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~ 100 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT-PDRLF 100 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-CCEEE
Confidence 356888899999999999999964 68999999997532 2346788999999988 69999999998865 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||+++|+|.++++... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 101 lv~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG 169 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR--------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFG 169 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEeCCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccc
Confidence 9999999999999997642 489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .....+||++|+|
T Consensus 170 ~a~~~~~~~~-~~~~~~gt~~y~a 192 (353)
T 3txo_A 170 MCKEGICNGV-TTATFCGTPDYIA 192 (353)
T ss_dssp TCBCSCC----------CCGGGCC
T ss_pred ceeecccCCc-cccccCCCcCeEC
Confidence 9987532222 2344678999886
No 106
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.94 E-value=5.7e-27 Score=252.18 Aligned_cols=155 Identities=16% Similarity=0.309 Sum_probs=131.0
Q ss_pred CCCCccCccccCCeeeEEEEEe--------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL--------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHE 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~--------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~ 580 (693)
++|...+.||+|+||.||+|+. .++..||||++...... .++|.+|++++.++ +|||||+++++|.+ +
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~ 159 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 159 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-S
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-C
Confidence 4567778999999999999985 23567999999754322 46799999999999 89999999999875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+..++||||+++|+|.++++...... ......++|.++..++.||++||+|||+. +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 67899999999999999998643210 01124589999999999999999999998 99999999999999
Q ss_pred CCCCceEECCcccccccC
Q 035786 653 DDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~ 670 (693)
++++.+||+|||+++...
T Consensus 237 ~~~~~~kl~DFG~a~~~~ 254 (370)
T 2psq_A 237 TENNVMKIADFGLARDIN 254 (370)
T ss_dssp CTTCCEEECCCSSCEETT
T ss_pred CCCCCEEEccccCCcccC
Confidence 999999999999999764
No 107
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.94 E-value=6.5e-27 Score=246.96 Aligned_cols=165 Identities=17% Similarity=0.255 Sum_probs=138.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+.. +++.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..++|||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e 85 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLE 85 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEEEE
Confidence 45777889999999999999975 7899999998654322 4678999999999999999999999875 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.. ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 86 ~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 154 (323)
T 3tki_A 86 YCSGGELFDRIEPD--------IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (323)
T ss_dssp CCTTEEGGGGSBTT--------TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred cCCCCcHHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccce
Confidence 99999999998643 2489999999999999999999998 999999999999999999999999999987
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... ........+||+.|+|
T Consensus 155 ~~~~~~~~~~~~~~gt~~y~a 175 (323)
T 3tki_A 155 FRYNNRERLLNKMCGTLPYVA 175 (323)
T ss_dssp CEETTEECCBCSCCSCGGGSC
T ss_pred eccCCcccccCCCccCcCccC
Confidence 6322 2222344678888876
No 108
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2e-27 Score=265.01 Aligned_cols=217 Identities=22% Similarity=0.201 Sum_probs=172.4
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3479999999999988888889999999999999999887665 8889999999999998875432 37889999
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhh-cCcccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELR-GLRNLAKLVISENGLE 275 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~ 275 (693)
+++|.+++..+. .+++|+.|+|++|.+++..|..++.+++|++|+|++|.+++.+|..+. .+++|++|+|++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999988876554 457888999999999888888888888999999999999888887775 7888888888888888
Q ss_pred ccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccc
Q 035786 276 GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLY 349 (693)
Q Consensus 276 g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~ 349 (693)
+..+ ...+++|+.|+|++|.+++.+| .+..+++|+.|+|++|+|++ +|. .+..++.|+.|++++|.+.
T Consensus 183 ~~~~---~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~-~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 183 DVKG---QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEK-ALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp EEEC---CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECT-TCCCCTTCCEEECTTCCBC
T ss_pred cccc---cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cch-hhccCCCCCEEEcCCCCCc
Confidence 6532 2357888888888888887544 47788888888888888885 553 2445566666666666665
No 109
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=7.2e-26 Score=233.28 Aligned_cols=206 Identities=25% Similarity=0.224 Sum_probs=154.5
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46889999999998877778889999999999999998777778888999999999999998877788888999999999
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCccccc-CCccccCCCCCCEEEccCCcCcccCchhhhcCcccc----ccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGF-IPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA----KLVISEN 272 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~----~L~Ls~N 272 (693)
++|.+++..+..+..+++|++|++++|++++. +|..++++++|++|++++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99988877666788889999999999998874 688888899999999999999887777777776666 5556666
Q ss_pred cccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcc
Q 035786 273 GLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325 (693)
Q Consensus 273 ~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g 325 (693)
.+++. +...+.. .+|+.|++++|++++..+..+..+++|+.|+|++|.+++
T Consensus 188 ~l~~~-~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 188 PMNFI-QPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEE-CTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ccccc-CccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 65532 2222222 245555555555554444444444555555555554443
No 110
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.94 E-value=3e-27 Score=261.24 Aligned_cols=149 Identities=23% Similarity=0.392 Sum_probs=131.5
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+..++..||||++.......++|.+|+++|++++|||||+++++|.+ +..++|||||+
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CceEEEehhhc
Confidence 4567788999999999999999888899999998766667889999999999999999999998864 56899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.++++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...+
T Consensus 262 ~gsL~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 262 KGSLLDFLKGETG------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp TCBHHHHHSHHHH------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999974321 3489999999999999999999998 999999999999999999999999999998743
No 111
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.94 E-value=6.6e-27 Score=243.43 Aligned_cols=165 Identities=17% Similarity=0.225 Sum_probs=134.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+++.||||++...... .+.|.+|++++.+++|||||++++++.+ ++..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 89 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-DDCYYLV 89 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-CCeEEEE
Confidence 3577788999999999999986 46899999998543322 3578999999999999999999998875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~e~~~g~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 158 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG--------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIA 158 (294)
T ss_dssp EECCCSCBHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSS
T ss_pred EeCCCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCc
Confidence 99999999999997542 489999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.............+||+.|+|
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~a 180 (294)
T 4eqm_A 159 KALSETSLTQTNHVLGTVQYFS 180 (294)
T ss_dssp TTC-------------CCSSCC
T ss_pred cccccccccccCccccCccccC
Confidence 9875443333344567777765
No 112
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.94 E-value=6.9e-27 Score=252.91 Aligned_cols=164 Identities=19% Similarity=0.233 Sum_probs=139.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...++||+|+||+||+|+.. +++.||||++...... .+.+.+|.+++.++ +|||||++++++.+ ++..++
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~l 130 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFF 130 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-CCEEEE
Confidence 45778899999999999999975 5889999999754322 34688999999887 89999999998875 568999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... .+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 131 V~E~~~gg~L~~~l~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGl 199 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM 199 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEcCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecce
Confidence 999999999999997642 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... .....+||++|+|
T Consensus 200 a~~~~~~~~-~~~~~~gt~~Y~a 221 (396)
T 4dc2_A 200 CKEGLRPGD-TTSTFCGTPNYIA 221 (396)
T ss_dssp CBCCCCTTC-CBCCCCBCGGGCC
T ss_pred eeecccCCC-ccccccCCcccCC
Confidence 987422222 1344789999987
No 113
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.94 E-value=8.8e-27 Score=247.94 Aligned_cols=166 Identities=19% Similarity=0.265 Sum_probs=140.6
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
..++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|.+++..+ +|||||++++++.+ ++..
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-~~~~ 93 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KENL 93 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-CCEE
Confidence 3456888899999999999999975 68999999997532 2356788899999887 99999999998875 4689
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++|+|.+++.... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 162 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADF 162 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEC
Confidence 99999999999999997532 489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++....... .....+||++|+|
T Consensus 163 G~a~~~~~~~~-~~~~~~gt~~y~a 186 (345)
T 1xjd_A 163 GMCKENMLGDA-KTNTFCGTPDYIA 186 (345)
T ss_dssp TTCBCCCCTTC-CBCCCCSCGGGCC
T ss_pred hhhhhcccCCC-cccCCCCCcccCC
Confidence 99987532221 1344678888876
No 114
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.94 E-value=2.7e-27 Score=253.28 Aligned_cols=184 Identities=17% Similarity=0.218 Sum_probs=145.7
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccce
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPL 572 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l 572 (693)
+...++....++|...+.||+|+||.||+|++ .+++.||||++...... .+.|.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44455555667788899999999999999974 34689999999754332 45799999999999 89999999
Q ss_pred eEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCC---------------------------------------------
Q 035786 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLED--------------------------------------------- 607 (693)
Q Consensus 573 ~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~--------------------------------------------- 607 (693)
+++|.+.+...++||||+++|+|.++++.......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998755568999999999999999986432100
Q ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC-C
Q 035786 608 -------------DSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS-H 673 (693)
Q Consensus 608 -------------~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~-~ 673 (693)
.....+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++..... .
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 0012389999999999999999999998 9999999999999999999999999999976332 2
Q ss_pred cceeeeeehhhhhhh
Q 035786 674 QNVLTRFLWRQLYQS 688 (693)
Q Consensus 674 ~~~~~~~~~~~~y~a 688 (693)
....+...+|+.|+|
T Consensus 249 ~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 249 YVRKGDARLPLKWMA 263 (359)
T ss_dssp CEEC--CEECGGGCC
T ss_pred chhccccCCCceeEC
Confidence 222344556667765
No 115
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.94 E-value=8.8e-27 Score=251.18 Aligned_cols=162 Identities=20% Similarity=0.258 Sum_probs=140.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|... +|+.||||.+.... ...+.+.+|++++.+++|||||+++++|.+ +...++||
T Consensus 16 ~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~lv~ 94 (384)
T 4fr4_A 16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-EEDMFMVV 94 (384)
T ss_dssp GEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEE
Confidence 4777889999999999999964 58899999986432 235678999999999999999999998875 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 95 e~~~gg~L~~~l~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN--------VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp CCCTTEEHHHHHHTT--------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ecCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceee
Confidence 999999999999753 2489999999999999999999998 99999999999999999999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .+..+||++|+|
T Consensus 164 ~~~~~~~--~~~~~gt~~Y~a 182 (384)
T 4fr4_A 164 MLPRETQ--ITTMAGTKPYMA 182 (384)
T ss_dssp ECCTTCC--BCCCCSCGGGCC
T ss_pred eccCCCc--eeccCCCccccC
Confidence 8744332 345678888887
No 116
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.94 E-value=6.2e-27 Score=241.85 Aligned_cols=148 Identities=21% Similarity=0.362 Sum_probs=131.5
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+..++..||||++.......++|.+|++++.+++||||++++++|.+ ++..++||||++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 102 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMA 102 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEECCCT
T ss_pred HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEec-CCCeEEEEeccC
Confidence 3467778999999999999999988999999998776677889999999999999999999998865 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 103 ~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 103 NGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp TCBHHHHHHCGG-------GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred CCcHHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 999999997532 3489999999999999999999998 99999999999999999999999999998763
No 117
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.94 E-value=1.4e-26 Score=241.21 Aligned_cols=164 Identities=16% Similarity=0.247 Sum_probs=135.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---------------------------CHHHHHHHHHHHhc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---------------------------KKESYMMELDLFSR 563 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---------------------------~~~~f~~Ei~~l~~ 563 (693)
++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.|.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 4577788999999999999986 4689999999865321 12468999999999
Q ss_pred CCCCCccceeEEEEcC-CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEe
Q 035786 564 VSHARLVPLLGQCLEH-ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVH 642 (693)
Q Consensus 564 l~H~niv~l~g~~~~~-~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiH 642 (693)
++|||||++++++.+. +...++||||+++|+|.+++.. ..+++.+...++.|+++||+|||+. +|+|
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH 160 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---------KPLSEDQARFYFQDLIKGIEYLHYQ---KIIH 160 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---------SCCCHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---Ceec
Confidence 9999999999998753 3568999999999999886542 3599999999999999999999998 9999
Q ss_pred cCCCCCCeeeCCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 643 RDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 643 rDlk~~NILld~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||||+||++++++.+||+|||+++....... ......||+.|+|
T Consensus 161 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~a 205 (298)
T 2zv2_A 161 RDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMA 205 (298)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCC
T ss_pred cCCCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccC
Confidence 99999999999999999999999998754332 2334568888876
No 118
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.94 E-value=1.4e-26 Score=246.58 Aligned_cols=164 Identities=20% Similarity=0.234 Sum_probs=139.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.++ +|||||++++++.+ +...++
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-CCEEEE
Confidence 34777889999999999999975 5899999999754322 35688999999988 89999999998875 468999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 88 v~e~~~gg~L~~~l~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~ 156 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR--------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM 156 (345)
T ss_dssp EECCCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGG
T ss_pred EEeCCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccc
Confidence 999999999999997532 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... .....+||++|+|
T Consensus 157 a~~~~~~~~-~~~~~~gt~~y~a 178 (345)
T 3a8x_A 157 CKEGLRPGD-TTSTFCGTPNYIA 178 (345)
T ss_dssp CBCSCCTTC-CBCCCCSCGGGCC
T ss_pred cccccCCCC-cccccCCCccccC
Confidence 987432222 1344678888876
No 119
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.94 E-value=1.1e-26 Score=241.97 Aligned_cols=165 Identities=23% Similarity=0.406 Sum_probs=133.4
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhc--CCCCCccceeEEEEcC---CCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSR--VSHARLVPLLGQCLEH---ETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~--l~H~niv~l~g~~~~~---~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++.+. ....++|
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 4577889999999999999998 5899999998643 34556677777766 7999999999987642 2347899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceEEC
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
|||+++|+|.++++. ..++|..+.+|+.+++.||+|||... ..+|+||||||+|||++.++.+||+
T Consensus 85 ~e~~~~g~L~~~l~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 85 THYHEMGSLYDYLQL---------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp ECCCTTCBHHHHHTT---------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred hhhccCCCHHHHHhh---------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe
Confidence 999999999999953 24899999999999999999999221 3399999999999999999999999
Q ss_pred CcccccccCCCCcce---eeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNV---LTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~---~~~~~~~~~y~a 688 (693)
|||+++......... .....||+.|+|
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 185 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCC
T ss_pred eCCCeeecccccccccccccccccccceeC
Confidence 999998764332221 223467777765
No 120
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.94 E-value=1.6e-26 Score=243.33 Aligned_cols=161 Identities=19% Similarity=0.220 Sum_probs=139.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+.... ...+.+.+|+.+++.++|||||++++++.+ +...++|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-AQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-CCEEEEE
Confidence 35777889999999999999974 68999999996532 235678899999999999999999998875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++.. ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 85 ~e~~~gg~L~~~l~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a 153 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS--------QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFA 153 (318)
T ss_dssp ECCCCSCBHHHHHHHT--------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EeCCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcc
Confidence 9999999999999753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...+.. ...+||+.|+|
T Consensus 154 ~~~~~~~----~~~~gt~~y~a 171 (318)
T 1fot_A 154 KYVPDVT----YTLCGTPDYIA 171 (318)
T ss_dssp EECSSCB----CCCCSCTTTCC
T ss_pred eecCCcc----ccccCCccccC
Confidence 9864432 23567888876
No 121
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.94 E-value=1.4e-26 Score=255.82 Aligned_cols=148 Identities=24% Similarity=0.405 Sum_probs=132.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|++. |+.||||+++... ..++|.+|+++|++++|||||+++++|.+.+...++|||||+
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 45677789999999999999986 7899999997644 456799999999999999999999999875557899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.++++.... ..+++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 271 ~g~L~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 271 KGSLVDYLRSRGR------SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp TCBHHHHHHHHCT------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCcHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 9999999986432 3479999999999999999999998 99999999999999999999999999998753
No 122
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.94 E-value=2.4e-26 Score=246.14 Aligned_cols=163 Identities=18% Similarity=0.234 Sum_probs=140.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
+.|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++.+++|||||++++++.+ +...
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~ 90 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-RTDV 90 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe-CCEE
Confidence 45777889999999999999974 689999999975432 24679999999999999999999998875 4688
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----ceE
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF----EVR 659 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~----~~k 659 (693)
++||||+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||+++++ .+|
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vk 159 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--------ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--------SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEE
Confidence 9999999999999999643 3489999999999999999999998 999999999999998877 799
Q ss_pred ECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|||+++....... ....+||++|+|
T Consensus 160 l~DFG~a~~~~~~~~--~~~~~gt~~y~a 186 (361)
T 2yab_A 160 LIDFGLAHEIEDGVE--FKNIFGTPEFVA 186 (361)
T ss_dssp ECCCSSCEECCTTCC--CCCCCSCGGGCC
T ss_pred EEecCCceEcCCCCc--cccCCCCccEEC
Confidence 999999998754332 344678888876
No 123
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.94 E-value=1.4e-26 Score=242.79 Aligned_cols=169 Identities=23% Similarity=0.426 Sum_probs=130.4
Q ss_pred hCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
..+|...+.||+|+||.||+|+. +|+.||||++...... .++|.+|++++.+++|||||++++++.+ +...++||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 113 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-PPNLSIVT 113 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-TTCCEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCceEEEE
Confidence 34577788999999999999987 5889999998754433 3579999999999999999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++.... ...+++..+..++.|++.||+|||+. .++|+||||||+||++++++.+||+|||+++
T Consensus 114 e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGA-----REQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp ECCTTCBHHHHHHSTTH-----HHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred ecCCCCcHHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 99999999999975321 12389999999999999999999987 2339999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
........ .....||+.|+|
T Consensus 188 ~~~~~~~~-~~~~~gt~~y~a 207 (309)
T 3p86_A 188 LKASTFLS-SKSAAGTPEWMA 207 (309)
T ss_dssp ---------------CCTTSC
T ss_pred cccccccc-cccCCCCccccC
Confidence 76433221 233556666665
No 124
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.93 E-value=2e-26 Score=258.97 Aligned_cols=165 Identities=21% Similarity=0.239 Sum_probs=142.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+ ++..++|
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lV 262 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCLV 262 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-CCEEEEE
Confidence 45777889999999999999974 69999999996532 235678999999999999999999998875 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
||||++|+|.+++..... ..+++..+..++.+|+.||+|||+. +||||||||+|||+++++.+||+|||++
T Consensus 263 mEy~~gg~L~~~l~~~~~------~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla 333 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ------AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA 333 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEcCCCCcHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccc
Confidence 999999999999975321 3489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .+..+||++|+|
T Consensus 334 ~~~~~~~~--~~~~~GT~~Y~A 353 (576)
T 2acx_A 334 VHVPEGQT--IKGRVGTVGYMA 353 (576)
T ss_dssp EECCTTCC--EECCCSCGGGCC
T ss_pred eecccCcc--ccccCCCccccC
Confidence 98754432 344689999987
No 125
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.93 E-value=6.4e-27 Score=252.47 Aligned_cols=148 Identities=24% Similarity=0.393 Sum_probs=130.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+.. +++.||||.+...... .++|.+|++++++++|||||+++|+|.+ ++..++|||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e 192 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVME 192 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-CCCcEEEEE
Confidence 45677789999999999999985 7899999998754222 3578999999999999999999999975 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||++|+|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 193 ~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~ 262 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG-------ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSRE 262 (377)
T ss_dssp CCTTCBHHHHHHHHG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred cCCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCcee
Confidence 999999999997532 2489999999999999999999998 899999999999999999999999999987
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 263 ~~ 264 (377)
T 3cbl_A 263 EA 264 (377)
T ss_dssp CT
T ss_pred cC
Confidence 64
No 126
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.93 E-value=2.3e-26 Score=245.32 Aligned_cols=161 Identities=16% Similarity=0.184 Sum_probs=139.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+.... ...+.+.+|++++.+++|||||++++++.+ +...++|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-NSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-CCEEEEE
Confidence 34777889999999999999974 68999999996532 235678999999999999999999998875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 120 ~e~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a 188 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG--------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFA 188 (350)
T ss_dssp EECCTTCBHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EcCCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccc
Confidence 99999999999997642 489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...... ...+||+.|+|
T Consensus 189 ~~~~~~~----~~~~gt~~y~a 206 (350)
T 1rdq_E 189 KRVKGRT----WTLCGTPEALA 206 (350)
T ss_dssp EECSSCB----CCCEECGGGCC
T ss_pred eeccCCc----ccccCCccccC
Confidence 9874432 23578888876
No 127
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.93 E-value=1.9e-26 Score=242.04 Aligned_cols=164 Identities=19% Similarity=0.308 Sum_probs=135.3
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+..+|+.||||++...... .+.+.+|++++.+++|||||++++++.+ +...++|||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 99 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-ERCLTLVFE 99 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-SSCEEEEEE
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-CCEEEEEEc
Confidence 457778899999999999999988999999999654322 4678999999999999999999998865 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++ |+|.+++.... ..+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~~~-~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 100 FME-KDLKKVLDENK-------TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARA 168 (311)
T ss_dssp CCS-EEHHHHHHTCT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CCC-CCHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCcee
Confidence 998 58888886532 3489999999999999999999998 999999999999999999999999999998
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
.+..... .+..++|++|+|
T Consensus 169 ~~~~~~~-~~~~~~t~~y~a 187 (311)
T 3niz_A 169 FGIPVRS-YTHEVVTLWYRA 187 (311)
T ss_dssp TTSCCC----CCCCCCTTCC
T ss_pred cCCCccc-ccCCcccCCcCC
Confidence 7433221 333456777765
No 128
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.93 E-value=1.6e-26 Score=256.10 Aligned_cols=147 Identities=16% Similarity=0.272 Sum_probs=119.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC----Cee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE----TEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~ 583 (693)
++|...+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++.+++|||||+++++|.... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 45788899999999999999864 6899999999653322 467899999999999999999999885432 458
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|+||||+. |+|.++++.. ..+++.....|+.||+.||+|||+. +||||||||+|||+++++.+||+||
T Consensus 133 ~lv~e~~~-~~L~~~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DF 200 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTP--------VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDF 200 (458)
T ss_dssp EEEECCCS-EEHHHHHHSS--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEeccc-cchhhhcccC--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccc
Confidence 99999985 7999998743 3499999999999999999999998 9999999999999999999999999
Q ss_pred ccccccC
Q 035786 664 SELHAQG 670 (693)
Q Consensus 664 gla~~~~ 670 (693)
|+++...
T Consensus 201 Gla~~~~ 207 (458)
T 3rp9_A 201 GLARTVD 207 (458)
T ss_dssp TTCBCTT
T ss_pred ccchhcc
Confidence 9999874
No 129
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=6.6e-27 Score=246.21 Aligned_cols=245 Identities=23% Similarity=0.216 Sum_probs=208.8
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
.++.++++.+.+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 46667788888766666667788899999999999999888999999999999999999997665 8999999999999
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++. | ..++|+.|++++|++++..+.. +++|++|++++|++++..|..+..+++|++|++++|.+++..
T Consensus 89 ~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9999853 2 3489999999999999866543 678999999999999988889999999999999999999877
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CC
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SS 356 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~ 356 (693)
+..++..+++|++|++++|++++. |. ...+++|++|+|++|++++..| . +..++.|+.|++++|++++ +|. ..
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~-~-~~~l~~L~~L~L~~N~l~~-l~~~~~~ 235 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-E-FQSAAGVTWISLRNNKLVL-IEKALRF 235 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-G-GGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchh-h-hcccCcccEEECcCCcccc-hhhHhhc
Confidence 766656789999999999999976 33 3358999999999999996444 3 6678999999999999995 454 56
Q ss_pred CCCCCEEEccCCcce-eecCCCc
Q 035786 357 FRKFSLIDLSSNYFQ-GTVADDR 378 (693)
Q Consensus 357 ~~~l~~ldLs~N~l~-g~ip~~~ 378 (693)
+++|+.|++++|.++ +.+|..+
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHH
T ss_pred CCCCCEEEccCCCccCcCHHHHH
Confidence 789999999999998 5555443
No 130
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=2.8e-27 Score=263.79 Aligned_cols=236 Identities=21% Similarity=0.152 Sum_probs=201.8
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
..++|+.|++++|.+.+..|..+. .+++|++|+|++|.+++.+| |+.+++|++|+|++|.+++..+ .++|++
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLA-PFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGT-TCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHh-CCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 445899999999999998888886 59999999999999998766 9999999999999999986433 389999
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCcccc-CCCCCCEEEccCCc
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG-NLDKLIELDLSKNS 249 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~ 249 (693)
|++++|.+++..+. .+++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++.+|..+. .+++|++|+|++|.
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 99999999987664 468899999999999999899999999999999999999998888886 79999999999999
Q ss_pred CcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCc-ccCC
Q 035786 250 ISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT-GSWP 328 (693)
Q Consensus 250 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~-g~~p 328 (693)
+++..+ ...+++|+.|+|++|.+++..| . |..+++|+.|++++|.+++ +|..+..+++|+.|++++|.++ +.+|
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFMGP-E-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEECG-G-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred cccccc--cccCCCCCEEECCCCCCCCCCH-h-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 997633 3469999999999999997544 4 5789999999999999996 7888999999999999999998 5555
Q ss_pred ccCcCCCCCCcEEEc
Q 035786 329 ILSTNGNASGAVFNI 343 (693)
Q Consensus 329 ~~~~~~~~~l~~l~l 343 (693)
. .+..+..+..+++
T Consensus 256 ~-~~~~l~~L~~l~~ 269 (487)
T 3oja_A 256 D-FFSKNQRVQTVAK 269 (487)
T ss_dssp H-HHTTCHHHHHHHH
T ss_pred H-HHHhCCCCcEEec
Confidence 3 3333333333333
No 131
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.93 E-value=5.2e-27 Score=264.63 Aligned_cols=148 Identities=23% Similarity=0.385 Sum_probs=133.5
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|++.++..||||++.......++|.+|+++|.+++|+|||+++++|.+ +..++|||||+
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~lv~e~~~ 344 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMS 344 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCT
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee--ccceEeeehhc
Confidence 4567778999999999999999888899999998766667889999999999999999999999864 56899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.++|+.... ..+++.++.+|+.||++||+|||.. +||||||||+|||+++++.+||+|||+++...
T Consensus 345 ~gsL~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 345 KGSLLDFLKGETG------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp TEEHHHHHSHHHH------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred CCcHHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 9999999974321 3489999999999999999999998 99999999999999999999999999999864
No 132
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.93 E-value=2.7e-26 Score=244.99 Aligned_cols=165 Identities=17% Similarity=0.173 Sum_probs=140.1
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 584 (693)
.++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|.+++..+ +||||+++++++.+ ++..+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~ 97 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLY 97 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-SSEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-CCEEE
Confidence 356888899999999999999975 48899999997532 2356788999999988 89999999998765 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||+++|+|.+++.... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 98 lv~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG 166 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFG 166 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEeCCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCC
Confidence 9999999999999997532 489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .....+||+.|+|
T Consensus 167 ~a~~~~~~~~-~~~~~~gt~~y~a 189 (353)
T 2i0e_A 167 MCKENIWDGV-TTKTFCGTPDYIA 189 (353)
T ss_dssp TCBCCCCTTC-CBCCCCSCGGGCC
T ss_pred cccccccCCc-ccccccCCccccC
Confidence 9987532221 1344678888876
No 133
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.93 E-value=1.9e-26 Score=247.16 Aligned_cols=163 Identities=17% Similarity=0.133 Sum_probs=132.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|...+.||+|+||.||+++.. +++.||||++.......+.+.+|++++++++|||||++++++.+ +...++||||+
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~ 98 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT-PTHLAIIMEYA 98 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEee-CCEEEEEEEeC
Confidence 45777889999999999999975 68999999997665556779999999999999999999999875 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc--eEECCcccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE--VRLGSLSELHA 668 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~--~ki~Dfgla~~ 668 (693)
++|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 99 ~~~~L~~~l~~~~--------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 99 SGGELYERICNAG--------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp CSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred CCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 9999999997532 489999999999999999999998 9999999999999998765 99999999986
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....+||++|+|
T Consensus 168 ~~~~~~--~~~~~gt~~y~a 185 (361)
T 3uc3_A 168 SVLHSQ--PKSTVGTPAYIA 185 (361)
T ss_dssp ---------------CTTSC
T ss_pred ccccCC--CCCCcCCCCcCC
Confidence 422221 233567777775
No 134
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.93 E-value=3.2e-26 Score=240.98 Aligned_cols=166 Identities=19% Similarity=0.329 Sum_probs=138.8
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~lv~e 588 (693)
.|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+.. ...++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 4667789999999999999975 58999999997533 23567899999999999999999999887543 25789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee----CCCCceEECCcc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----DDKFEVRLGSLS 664 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----d~~~~~ki~Dfg 664 (693)
|+++|+|.+++..... ...+++.++..|+.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 90 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSN-----AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp CCTTCBHHHHHHSGGG-----TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred CCCCCCHHHHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 9999999999975422 13499999999999999999999998 99999999999999 888899999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||+.|+|
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~a 183 (319)
T 4euu_A 162 AARELEDDEQ--FVSLYGTEEYLH 183 (319)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCC
T ss_pred CceecCCCCc--eeecccCCCccC
Confidence 9998744332 233557777765
No 135
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.93 E-value=1.9e-26 Score=248.31 Aligned_cols=161 Identities=19% Similarity=0.290 Sum_probs=131.1
Q ss_pred CccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 515 SETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
...++||+|+||.||+|+. .+|+.||||++..... ..++|.+|++++.+++|||||+++++|.+ ++..++||||+++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-KNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCTT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeCCCC
Confidence 3456899999999999986 4689999999976443 35689999999999999999999999875 4688999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee--CCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL--DDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl--d~~~~~ki~Dfgla~~~~ 670 (693)
|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++...
T Consensus 171 ~~L~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 171 GELFDRIIDES-------YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp CEEHHHHHHTG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred CcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 99999987532 3489999999999999999999998 89999999999999 677899999999999874
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
.... ....+||++|+|
T Consensus 241 ~~~~--~~~~~gt~~y~a 256 (373)
T 2x4f_A 241 PREK--LKVNFGTPEFLA 256 (373)
T ss_dssp TTCB--CCCCCSSCTTCC
T ss_pred Cccc--cccccCCCcEeC
Confidence 4332 223457777765
No 136
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.93 E-value=1e-26 Score=241.91 Aligned_cols=148 Identities=21% Similarity=0.396 Sum_probs=127.7
Q ss_pred CCCccCccccCCeeeEEEEEe-----CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~l 585 (693)
+|...+.||+|+||.||+|++ .+++.||||++...... .+.|.+|++++.+++|||||+++++|... ....++
T Consensus 11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 90 (295)
T 3ugc_A 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90 (295)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEE
T ss_pred HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEE
Confidence 466778999999999999985 35889999999754333 46799999999999999999999998643 235789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..+++.++.+++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 91 IMEYLPYGSLRDYLQKHK-------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp EEECCTTCBHHHHHHHCG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred EEEeCCCCCHHHHHHhcc-------cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 999999999999997532 2489999999999999999999998 999999999999999999999999999
Q ss_pred ccccC
Q 035786 666 LHAQG 670 (693)
Q Consensus 666 a~~~~ 670 (693)
++...
T Consensus 161 ~~~~~ 165 (295)
T 3ugc_A 161 TKVLP 165 (295)
T ss_dssp CC---
T ss_pred ccccc
Confidence 99874
No 137
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.93 E-value=2e-26 Score=241.80 Aligned_cols=163 Identities=20% Similarity=0.158 Sum_probs=133.4
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||+||+|+.. +|+.||||++...... ..++.+|+..+.++ +|||||+++++|.+ +...++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-GGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-CCEEEEE
Confidence 35888899999999999999975 7999999998654332 34566677766666 89999999999876 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+ +|+|.+++.... ..++|..+..|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 136 ~e~~-~~~L~~~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG-------ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EECC-CCBHHHHHHHHC-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred Eecc-CCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceee
Confidence 9999 779999987543 3599999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .+...||+.|+|
T Consensus 205 ~~~~~~~~--~~~~~gt~~y~a 224 (311)
T 3p1a_A 205 VELGTAGA--GEVQEGDPRYMA 224 (311)
T ss_dssp EECC--------CCCCCGGGCC
T ss_pred eecccCCC--CcccCCCccccC
Confidence 88744332 233457777765
No 138
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.93 E-value=1.7e-26 Score=238.00 Aligned_cols=149 Identities=23% Similarity=0.421 Sum_probs=133.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+..++..||||++.......+.|.+|++++.+++||||+++++++.+ +..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC--CCcEEEEecCC
Confidence 3467788999999999999999888899999998766667889999999999999999999998753 46899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++..... ..+++.++.+++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 91 ~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 91 NGSLVDFLKTPSG------IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp TCBHHHHTTSHHH------HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCCHHHHHhcCCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999974321 2589999999999999999999998 999999999999999999999999999998744
No 139
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.93 E-value=4.4e-26 Score=239.87 Aligned_cols=169 Identities=21% Similarity=0.347 Sum_probs=126.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++++++|||||++++++.+ ++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 83 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-ENKLTLVFE 83 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-TTEEEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-CCeEEEEEE
Confidence 45778889999999999999864 689999999875432 24678999999999999999999998875 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++ |+|.+++...... .....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 84 ~~~-~~L~~~l~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVG--NTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp CCC-CBHHHHHHHHHSS--SCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred ecC-CCHHHHHHhcccc--ccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 998 6999999753211 1123589999999999999999999998 999999999999999999999999999988
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
....... ....++|++|+|
T Consensus 158 ~~~~~~~-~~~~~~t~~y~a 176 (317)
T 2pmi_A 158 FGIPVNT-FSSEVVTLWYRA 176 (317)
T ss_dssp TTSCCCC-CCCCCSCCTTCC
T ss_pred cCCCccc-CCCCcccccccC
Confidence 6432221 233456666665
No 140
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.2e-26 Score=249.43 Aligned_cols=172 Identities=20% Similarity=0.285 Sum_probs=136.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|++. +++.||||++...... ..+|.+|++++.+++|||||++++++.+ +...
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~ 149 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPR 149 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSC
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCCC
Confidence 34677889999999999999953 3678999999653222 4579999999999999999999999875 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---ceEE
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF---EVRL 660 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~---~~ki 660 (693)
++||||+++|+|.++++...... .....++|.++..|+.|+++||+|||+. +|+||||||+|||++.++ .+||
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRP-SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred EEEEEeCCCCCHHHHHHhhcccc-CccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 99999999999999998644211 1224599999999999999999999998 999999999999999544 5999
Q ss_pred CCcccccccCC-CCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGD-SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~-~~~~~~~~~~~~~~y~a 688 (693)
+|||+++.... ..........+|+.|+|
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~a 254 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMP 254 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCC
T ss_pred CCCccccccccccccccCCCcCCcccEEC
Confidence 99999987521 11111223445666665
No 141
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.93 E-value=1.8e-26 Score=244.04 Aligned_cols=164 Identities=19% Similarity=0.212 Sum_probs=128.8
Q ss_pred CCCCccCccccCCeeeEEEEEe----CCCcEEEEEEecccc-----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHS-----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++.+++|||||++++++.+ ++.
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~ 95 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-GGK 95 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC-SSC
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc-CCE
Confidence 3577788999999999999986 468999999997542 123568899999999999999999998875 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||+++|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~D 164 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTD 164 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECC
T ss_pred EEEEEeCCCCCcHHHHHHhCC--------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEe
Confidence 899999999999999997532 488999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++....... .....+||++|+|
T Consensus 165 fg~~~~~~~~~~-~~~~~~gt~~y~a 189 (327)
T 3a62_A 165 FGLCKESIHDGT-VTHTFCGTIEYMA 189 (327)
T ss_dssp CSCC-----------CTTSSCCTTSC
T ss_pred CCcccccccCCc-cccccCCCcCccC
Confidence 999987532211 1223567777765
No 142
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.93 E-value=5.9e-26 Score=239.93 Aligned_cols=162 Identities=15% Similarity=0.225 Sum_probs=138.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
.|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++.+++|||||++++++.+ +...+
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~ 90 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-KTDVI 90 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEE
Confidence 4777889999999999999974 689999999865322 25679999999999999999999999875 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----ceEE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF----EVRL 660 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~----~~ki 660 (693)
+||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||+++++ .+||
T Consensus 91 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 159 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK--------ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKI 159 (326)
T ss_dssp EEEECCCSCBHHHHHTTS--------SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred EEEEcCCCCCHHHHHHhc--------CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEE
Confidence 999999999999999643 3489999999999999999999998 999999999999999887 8999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++....... ....+||+.|+|
T Consensus 160 ~Dfg~a~~~~~~~~--~~~~~gt~~y~a 185 (326)
T 2y0a_A 160 IDFGLAHKIDFGNE--FKNIFGTPEFVA 185 (326)
T ss_dssp CCCTTCEECCTTSC--CCCCCSCTTTCC
T ss_pred EECCCCeECCCCCc--cccccCCcCcCC
Confidence 99999998743322 234567777776
No 143
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.93 E-value=1.2e-26 Score=255.97 Aligned_cols=164 Identities=18% Similarity=0.192 Sum_probs=130.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++.+++|||||+++++|.+ ++..++|
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~~~~lv 226 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFV 226 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-TTEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-CCEEEEE
Confidence 4578889999999999999996 468999999996532 224568899999999999999999999876 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-CCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH-ECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||++|+|.+++... ..+++..+..++.+++.||+|||+ . +||||||||+|||++.++.+||+|||+
T Consensus 227 ~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~ 295 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE--------RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGL 295 (446)
T ss_dssp ECCCSSCBHHHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCC
T ss_pred EeeCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCC
Confidence 9999999999999754 248999999999999999999997 6 899999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++........ .+..+||++|+|
T Consensus 296 a~~~~~~~~~-~~~~~gt~~y~a 317 (446)
T 4ejn_A 296 CKEGIKDGAT-MKTFCGTPEYLA 317 (446)
T ss_dssp CCTTCC------CCSSSCGGGCC
T ss_pred ceeccCCCcc-cccccCCccccC
Confidence 9875332221 344678888876
No 144
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.93 E-value=4.3e-26 Score=244.50 Aligned_cols=164 Identities=19% Similarity=0.247 Sum_probs=139.3
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||+++++|.+ ++..++|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 345788899999999999999864 6899999999754433 3578899999999999999999999875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC---CceEECCc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK---FEVRLGSL 663 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~---~~~ki~Df 663 (693)
|||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.+ ..+||+||
T Consensus 107 ~e~~~gg~L~~~l~~~--------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Df 175 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--------EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADF 175 (362)
T ss_dssp ECCCCSCBHHHHHTTC--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCC
T ss_pred EecCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeec
Confidence 9999999999998643 3489999999999999999999998 99999999999999865 45999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++...+... ....+||+.|+|
T Consensus 176 G~a~~~~~~~~--~~~~~gt~~y~a 198 (362)
T 2bdw_A 176 GLAIEVNDSEA--WHGFAGTPGYLS 198 (362)
T ss_dssp TTCBCCTTCCS--CCCSCSCTTTCC
T ss_pred CcceEecCCcc--cccCCCCccccC
Confidence 99988754332 334678888876
No 145
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.93 E-value=2.3e-26 Score=235.25 Aligned_cols=147 Identities=23% Similarity=0.379 Sum_probs=133.7
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|+..++..||||++.......+++.+|++++.+++||||+++++++.+ ++..++||||+++
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVTEFMEH 87 (267)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSCEEEECCCTT
T ss_pred heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCeEEEEeCCCC
Confidence 466778999999999999999888999999998766667889999999999999999999999875 4678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 88 ~~L~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 155 (267)
T 3t9t_A 88 GCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 155 (267)
T ss_dssp CBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CcHHHHHhhCc-------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccc
Confidence 99999997542 3589999999999999999999998 89999999999999999999999999998763
No 146
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.93 E-value=3.2e-26 Score=251.53 Aligned_cols=165 Identities=18% Similarity=0.263 Sum_probs=136.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC----Cee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE----TEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~ 583 (693)
++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++.+++|||||++++++...+ ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 4677889999999999999996 46899999999753322 467899999999999999999999886532 468
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++|||||+ |+|.++++.. ..+++.....++.||++||.|||+. +|+||||||+|||+++++.+||+||
T Consensus 106 ~lv~e~~~-~~L~~~~~~~--------~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DF 173 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTP--------IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDF 173 (432)
T ss_dssp EEEEECCS-EEHHHHHHSS--------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEecCC-cCHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccC
Confidence 99999997 6999999753 3489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCc---------------------ceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQ---------------------NVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~---------------------~~~~~~~~~~~y~a 688 (693)
|+++....... ...+..+||++|+|
T Consensus 174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 219 (432)
T 3n9x_A 174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRA 219 (432)
T ss_dssp TTCEEC-------------------------------CCCCCTTCC
T ss_pred CCcccccccccccccccccccccccccccchhccccCCCCCccccC
Confidence 99998743221 12466788999987
No 147
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=2.1e-26 Score=247.91 Aligned_cols=147 Identities=27% Similarity=0.450 Sum_probs=122.2
Q ss_pred CCccCccccCCeeeEEEEEeC--CC--cEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA--GG--TTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~--~g--~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|...+.||+|+||.||+|+.. ++ ..||||.+...... .++|.+|++++++++|||||+++++|.+.++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 444578999999999999863 32 46899998653332 4689999999999999999999999876556789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++... ..+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 171 e~~~~g~L~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNET-------HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp ECCTTCBHHHHHHCTT-------CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred ECCCCCCHHHHHhhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 9999999999997532 3489999999999999999999998 99999999999999999999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
...
T Consensus 241 ~~~ 243 (373)
T 3c1x_A 241 DMY 243 (373)
T ss_dssp ---
T ss_pred ccc
Confidence 763
No 148
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.93 E-value=7.2e-26 Score=235.13 Aligned_cols=164 Identities=20% Similarity=0.297 Sum_probs=136.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-CCEEEEEE
Confidence 35677889999999999999974 6899999999754332 4678999999999999999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++ ++.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 81 e~~~~-~l~~~~~~~~-------~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 149 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN-------GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR 149 (292)
T ss_dssp ECCSE-EHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ecCCC-CHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccce
Confidence 99985 6666665422 3589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
..+..... .+...+|++|+|
T Consensus 150 ~~~~~~~~-~~~~~~t~~y~a 169 (292)
T 3o0g_A 150 AFGIPVRC-YSAEVVTLWYRP 169 (292)
T ss_dssp ECCSCCSC-CCSCCSCGGGCC
T ss_pred ecCCcccc-ccCCccccCCcC
Confidence 87433222 333567777765
No 149
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.93 E-value=3.1e-26 Score=237.51 Aligned_cols=163 Identities=20% Similarity=0.336 Sum_probs=133.8
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||+|+||.||+|+..+|+.||||++..... ..+.+.+|++++++++|||||++++++.+ ++..++||||
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 81 (288)
T 1ob3_A 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVFEH 81 (288)
T ss_dssp SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-SSCEEEEEEC
T ss_pred cchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-CCeEEEEEEe
Confidence 4667789999999999999988899999999865432 24678999999999999999999999875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++ +|.+++.... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~~~-~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-------GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF 150 (288)
T ss_dssp CSE-EHHHHHHTST-------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred cCC-CHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence 985 9999987532 3489999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .+...+|+.|+|
T Consensus 151 ~~~~~~-~~~~~~t~~y~a 168 (288)
T 1ob3_A 151 GIPVRK-YTHEIVTLWYRA 168 (288)
T ss_dssp CC----------CCCTTCC
T ss_pred Cccccc-cccccccccccC
Confidence 432221 233456666655
No 150
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=3.3e-25 Score=228.28 Aligned_cols=225 Identities=24% Similarity=0.202 Sum_probs=181.1
Q ss_pred EEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccC
Q 035786 123 LDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202 (693)
Q Consensus 123 L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 202 (693)
.+..+..++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 444455554 4566553 5799999999999988777899999999999999999987778899999999999999999
Q ss_pred CCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCccc-CchhhhcCccccccccccccccccCCCc
Q 035786 203 TGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGS-LPLELRGLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 203 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
++..|..+..+++|++|++++|++++..+..++++++|++|++++|.+++. +|..+.++++|++|++++|++++..+ .
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~-~ 167 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC-T 167 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG-G
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH-H
Confidence 988888899999999999999999988777899999999999999999874 68899999999999999999986443 3
Q ss_pred ccCCCCCCC----EEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 282 LFPTLDQLQ----VVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 282 ~~~~l~~L~----~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
.|..+.+|+ .|++++|++++..+..+ ...+|+.|+|++|++++ +|...+..+++|+.|++++|+++|+++
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSC-CCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceee-cCHhHhcccccccEEEccCCcccccCC
Confidence 345555555 78899999886555444 44578888888888884 443445566677777777777766554
No 151
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.93 E-value=2.8e-26 Score=243.16 Aligned_cols=162 Identities=18% Similarity=0.243 Sum_probs=138.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++++.++|||||++++++.+ +...++|
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv 87 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-PTDIVMV 87 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 4577788999999999999996 578999999986432 224578999999999999999999999875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+ +|+|.+++.... .+++.+...++.|++.||+|||.. +|+||||||+|||+++++.+||+|||++
T Consensus 88 ~E~~-~g~l~~~l~~~~--------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s 155 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK--------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLS 155 (336)
T ss_dssp ECCC-CEEHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCT
T ss_pred EECC-CCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccc
Confidence 9999 789999987542 489999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...+... ....+||+.|+|
T Consensus 156 ~~~~~~~~--~~~~~gt~~y~a 175 (336)
T 3h4j_B 156 NIMTDGNF--LKTSCGSPNYAA 175 (336)
T ss_dssp BTTTTSBT--TCCCTTSTTTSC
T ss_pred eeccCCcc--cccccCCcCcCC
Confidence 88744332 234568888876
No 152
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.93 E-value=4.6e-26 Score=243.34 Aligned_cols=167 Identities=20% Similarity=0.250 Sum_probs=138.9
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc------cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS------FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~------~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++.+++|||||++++++.+ ++..++
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~l 103 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-DGMLYM 103 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEE
Confidence 477788999999999999986 468999999985421 135779999999999999999999998876 468899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---eEECC
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---VRLGS 662 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ki~D 662 (693)
||||+++|+|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|||++.+.. +||+|
T Consensus 104 v~e~~~g~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~D 176 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRAD----AGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGG 176 (351)
T ss_dssp EEECCSSCBHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECC
T ss_pred EEeCCCCCCHHHHHHHhcc----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEec
Confidence 9999999999988864321 113589999999999999999999998 9999999999999986654 99999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++........ ....+||++|+|
T Consensus 177 fg~a~~~~~~~~~-~~~~~gt~~y~a 201 (351)
T 3c0i_A 177 FGVAIQLGESGLV-AGGRVGTPHFMA 201 (351)
T ss_dssp CTTCEECCTTSCB-CCCCCSCGGGCC
T ss_pred CcceeEecCCCee-ecCCcCCcCccC
Confidence 9999987543321 334678888876
No 153
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.93 E-value=3.4e-26 Score=243.10 Aligned_cols=175 Identities=21% Similarity=0.298 Sum_probs=138.8
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
..++|...+.||+|+||.||+|+.. +++.||||.+...... .+.|.+|++++.+++|||||+++++|.+ ++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-GK 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CC
Confidence 4567888899999999999999974 3488999999754322 4679999999999999999999999875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC----------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE----------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDV 645 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~----------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDl 645 (693)
..++||||+++|+|.++++...... ......+++.++..|+.++++||+|||+. +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 7899999999999999998642110 00124699999999999999999999998 9999999
Q ss_pred CCCCeeeCCCCceEECCcccccccCCCCc-ceeeeeehhhhhhh
Q 035786 646 QASSILLDDKFEVRLGSLSELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 646 k~~NILld~~~~~ki~Dfgla~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
||+||++++++.+||+|||+++....... .......+|+.|+|
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a 244 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMP 244 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCC
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecC
Confidence 99999999999999999999987633211 11223445555554
No 154
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.6e-26 Score=247.27 Aligned_cols=165 Identities=19% Similarity=0.174 Sum_probs=139.3
Q ss_pred CCCCccCccccCCeeeEEEEEe----CCCcEEEEEEecccc-----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHS-----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++.++ +||||+++++++.+ +.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~ 132 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ET 132 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-TT
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-Cc
Confidence 4577889999999999999987 368999999986432 2246688899999999 69999999998875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 201 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLT 201 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEES
T ss_pred eEEEEeecCCCCCHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEe
Confidence 8899999999999999997532 489999999999999999999998 89999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++.............+||+.|+|
T Consensus 202 DfG~a~~~~~~~~~~~~~~~gt~~y~a 228 (355)
T 1vzo_A 202 DFGLSKEFVADETERAYDFCGTIEYMA 228 (355)
T ss_dssp CSSEEEECCGGGGGGGCGGGSCCTTCC
T ss_pred eCCCCeecccCCCCcccCcccCcCccC
Confidence 999999764433333344567777765
No 155
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=7.6e-26 Score=245.02 Aligned_cols=166 Identities=23% Similarity=0.360 Sum_probs=129.3
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCC-CCCccceeEEEEcCC-Cee
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVS-HARLVPLLGQCLEHE-TEK 583 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~-~~~ 583 (693)
..++|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.++.+++ |||||++++++...+ ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 346788889999999999999986 56899999998643222 456889999999997 999999999987432 357
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++|||||+ |+|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 87 ~lv~e~~~-~~L~~~~~~---------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 153 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA---------NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADF 153 (388)
T ss_dssp EEEEECCS-EEHHHHHHH---------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEecccC-cCHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCC
Confidence 99999998 699999875 2489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCC--------------------CCcceeeeeehhhhhhh
Q 035786 664 SELHAQGD--------------------SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~--------------------~~~~~~~~~~~~~~y~a 688 (693)
|+++.... ......+..+||++|+|
T Consensus 154 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 198 (388)
T 3oz6_A 154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRA 198 (388)
T ss_dssp TTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCC
T ss_pred cccccccccccccccccccccccccccccccccccCCcccCCcCC
Confidence 99987632 11223455789999987
No 156
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.93 E-value=7.9e-26 Score=236.83 Aligned_cols=163 Identities=20% Similarity=0.362 Sum_probs=131.9
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+..+ .||||.++..... .+.|.+|++++.+++|||||++++++. ++..++|||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~lv~e 111 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--KDNLAIVTQ 111 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc--cCcEEEEEe
Confidence 457778899999999999998753 5899988653332 467999999999999999999999874 356899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++... ..+++.++..|+.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 112 ~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~ 181 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE-------TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp CCSSCBHHHHHHTSC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC
T ss_pred cCCCCcHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCcee
Confidence 999999999997432 3599999999999999999999998 999999999999999999999999999987
Q ss_pred cCC-CCcceeeeeehhhhhhh
Q 035786 669 QGD-SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~-~~~~~~~~~~~~~~y~a 688 (693)
... ..........||+.|+|
T Consensus 182 ~~~~~~~~~~~~~~gt~~y~a 202 (307)
T 3lb7_A 182 KSRWSGSQQVEQPTGSVLWMA 202 (307)
T ss_dssp ------------CCCCTTSCC
T ss_pred cccccccccccCCCCCcceEC
Confidence 532 11222334567777765
No 157
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.93 E-value=2.4e-26 Score=243.04 Aligned_cols=164 Identities=20% Similarity=0.328 Sum_probs=129.8
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCc----EEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGT----TVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~----~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||.||+|+.. +|+ .||+|++.... ...++|.+|++++++++|||||+++++|.+ ...++
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 93 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQL 93 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES--SSEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEE
Confidence 4777889999999999999963 444 46888875433 235789999999999999999999999975 35789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|+||+++|+|.++++... ..+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 94 v~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~ 163 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp EEECCTTCBHHHHHHHST-------TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred EEEecCCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcc
Confidence 999999999999998643 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcc-eeeeeehhhhhhh
Q 035786 666 LHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
++........ ......+|+.|+|
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~a 187 (327)
T 3poz_A 164 AKLLGAEEKEYHAEGGKVPIKWMA 187 (327)
T ss_dssp HHHHTTTCC-------CCCGGGSC
T ss_pred eeEccCCcccccccCCCccccccC
Confidence 9987433221 2223344555554
No 158
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.93 E-value=7e-26 Score=241.52 Aligned_cols=159 Identities=25% Similarity=0.401 Sum_probs=135.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...+.||+|+||.||+|+. .+|+.||||++...... .++|.+|++++++++|||||+++++|.+ ++..++||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 133 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVM 133 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCeEEEEE
Confidence 377778999999999999995 57999999999754332 3578999999999999999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||++ |+|.+++.... ..++|.++..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 134 e~~~-g~l~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSAS 202 (348)
T ss_dssp ECCS-EEHHHHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred ecCC-CCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence 9998 78988886432 3589999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... ..||++|+|
T Consensus 203 ~~~~~~~-----~~gt~~y~a 218 (348)
T 1u5q_A 203 IMAPANS-----FVGTPYWMA 218 (348)
T ss_dssp SSSSBCC-----CCSCGGGCC
T ss_pred ecCCCCc-----ccCCcceeC
Confidence 8754333 456666654
No 159
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.93 E-value=3.4e-26 Score=236.23 Aligned_cols=165 Identities=22% Similarity=0.299 Sum_probs=125.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|.... +..||||++...... .+.|.+|++++.+++|||||++++++. ++..++
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~l 92 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWI 92 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc--cCccEE
Confidence 346778899999999999998642 567999998653322 467999999999999999999999874 356899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 93 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 162 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK-------YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 162 (281)
T ss_dssp EEECCTTEEHHHHHHHTT-------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---
T ss_pred EEecCCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccc
Confidence 999999999999997532 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++..............+++.|+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~a 185 (281)
T 1mp8_A 163 SRYMEDSTYYKASKGKLPIKWMA 185 (281)
T ss_dssp ----------------CCGGGCC
T ss_pred ccccCcccccccccCCCcccccC
Confidence 99874433222223334455544
No 160
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.93 E-value=3.3e-26 Score=236.95 Aligned_cols=168 Identities=19% Similarity=0.362 Sum_probs=141.6
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
..+|...+.||+|+||.||+|+.. ++..||||.+.......++|.+|++++.+++||||++++++|.+ +...++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCEEEEEEc
Confidence 345777889999999999999975 48899999998665556789999999999999999999998865 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++..... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~~~~L~~~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 91 MTYGNLLDYLRECNR------QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp CTTEEHHHHHHHCCT------TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred CCCCcHHHHHHhccc------CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999976432 4589999999999999999999998 9999999999999999999999999999987
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
............+++.|+|
T Consensus 162 ~~~~~~~~~~~~~~~~y~a 180 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTA 180 (288)
T ss_dssp CSSSSEEETTEEECGGGCC
T ss_pred cCCccccccCCccccCcCC
Confidence 5443332333444445543
No 161
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.93 E-value=5.3e-26 Score=242.60 Aligned_cols=163 Identities=15% Similarity=0.201 Sum_probs=123.4
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.+.|...+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++.+++|||||+++++|.+ +...++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFET-PTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEec-CCeEEEEEEe
Confidence 455778889999999999999975 58899999997543 34568899999999999999999999875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Dfgla 666 (693)
+++|+|.+++... ..+++.++..++.+++.||+|||.. +|+||||||+|||++. ++.+||+|||++
T Consensus 130 ~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 130 VTGGELFDRIVEK--------GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp CCSCBHHHHHTTC--------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred CCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 9999999999753 2489999999999999999999998 9999999999999975 899999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....||+.|+|
T Consensus 199 ~~~~~~~~--~~~~~gt~~y~a 218 (349)
T 2w4o_A 199 KIVEHQVL--MKTVCGTPGYCA 218 (349)
T ss_dssp ----------------CGGGSC
T ss_pred cccCcccc--cccccCCCCccC
Confidence 98643322 334567777765
No 162
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.93 E-value=1.3e-25 Score=242.69 Aligned_cols=164 Identities=15% Similarity=0.219 Sum_probs=139.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||.||+|... +|+.||+|.+..... ..+.+.+|++++.+++|||||++++++.+ +...++||||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv~E~ 129 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEMVLILEF 129 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-CCEEEEEEEc
Confidence 45778889999999999999874 689999999875432 24578999999999999999999998875 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC--CCceEECCccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD--KFEVRLGSLSELH 667 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~--~~~~ki~Dfgla~ 667 (693)
+++|+|.+++.... ..+++.+...++.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+++
T Consensus 130 ~~gg~L~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 130 LSGGELFDRIAAED-------YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp CCCCBHHHHTTCTT-------CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred CCCCcHHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccce
Confidence 99999999987432 3589999999999999999999998 9999999999999984 4789999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .....||+.|+|
T Consensus 200 ~~~~~~~--~~~~~gt~~y~a 218 (387)
T 1kob_A 200 KLNPDEI--VKVTTATAEFAA 218 (387)
T ss_dssp ECCTTSC--EEEECSSGGGCC
T ss_pred ecCCCcc--eeeeccCCCccC
Confidence 8754332 344578888876
No 163
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.93 E-value=5.3e-26 Score=251.73 Aligned_cols=163 Identities=18% Similarity=0.276 Sum_probs=139.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+++++.++|||||++++++.+ ++..++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-PSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEE
Confidence 34677889999999999999974 79999999996532 224678999999999999999999999875 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 95 ~E~~~gg~L~~~l~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a 163 (476)
T 2y94_A 95 MEYVSGGELFDYICKN--------GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLS 163 (476)
T ss_dssp EECCSSEEHHHHTTSS--------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred EeCCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccch
Confidence 9999999999999643 3489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... ....+||++|+|
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~a 183 (476)
T 2y94_A 164 NMMSDGEF--LRTSCGSPNYAA 183 (476)
T ss_dssp EECCTTCC--BCCCCSCSTTCC
T ss_pred hhcccccc--ccccCCCcCeEC
Confidence 98754322 234567887765
No 164
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.93 E-value=8.3e-26 Score=248.44 Aligned_cols=165 Identities=16% Similarity=0.172 Sum_probs=138.7
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.++|...+.||+|+||.||+|.. .+|+.||+|++...... .+.+.+|++++++++|||||++++++.+ ++..++|
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lv 88 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGHHYLI 88 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-CCEEEEE
Confidence 34578889999999999999985 57999999998754322 4578999999999999999999998875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---CCCceEECCc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD---DKFEVRLGSL 663 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld---~~~~~ki~Df 663 (693)
|||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++ +++.+||+||
T Consensus 89 ~E~~~gg~L~~~i~~~--------~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DF 157 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR--------EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADF 157 (444)
T ss_dssp ECCCBCCBHHHHHHHC--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCC
T ss_pred EEeCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccC
Confidence 9999999999999753 2489999999999999999999998 999999999999999 4678999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++........ ....+||++|+|
T Consensus 158 G~a~~~~~~~~~-~~~~~gt~~Y~A 181 (444)
T 3soa_A 158 GLAIEVEGEQQA-WFGFAGTPGYLS 181 (444)
T ss_dssp SSCBCCCTTCCB-CCCSCSCGGGCC
T ss_pred ceeEEecCCCce-eecccCCcccCC
Confidence 999887543322 344678888876
No 165
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.93 E-value=8.4e-26 Score=253.20 Aligned_cols=168 Identities=19% Similarity=0.259 Sum_probs=141.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+ +...++|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-KTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-CCEEEEE
Confidence 45677788999999999999974 69999999996532 234678999999999999999999998765 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++..... ....+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 264 mE~~~gg~L~~~l~~~~~----~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla 336 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDE----DNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA 336 (543)
T ss_dssp ECCCTTCBHHHHHHTSST----TSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEeccCCCHHHHHHHhhc----ccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeeccee
Confidence 999999999999975431 123589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ ....+||++|+|
T Consensus 337 ~~~~~~~~~-~~~~~GT~~Y~A 357 (543)
T 3c4z_A 337 VELKAGQTK-TKGYAGTPGFMA 357 (543)
T ss_dssp EECCTTCCC-BCCCCSCTTTSC
T ss_pred eeccCCCcc-cccccCCccccC
Confidence 987443322 234578888886
No 166
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.93 E-value=7.8e-26 Score=235.42 Aligned_cols=165 Identities=25% Similarity=0.384 Sum_probs=134.4
Q ss_pred CCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|...+.||+|+||.||+|+..+ +..||||++...... .+.|.+|++++++++|||||+++++|.+.++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 5567899999999999998643 236899998753322 4679999999999999999999999887666789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 107 e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 107 PYMKHGDLRNFIRNET-------HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp ECCTTCBHHHHHHCTT-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eCCCCCCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 9999999999997532 3589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCc---ceeeeeehhhhhhh
Q 035786 668 AQGDSHQ---NVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~---~~~~~~~~~~~y~a 688 (693)
...+... ...+...+|+.|+|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~a 200 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMA 200 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSC
T ss_pred cccccchhccccccCCCCCccccC
Confidence 7643221 11333455666655
No 167
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.93 E-value=8.8e-26 Score=243.98 Aligned_cols=173 Identities=16% Similarity=0.251 Sum_probs=138.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC--------CCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA--------GGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHE 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~ 580 (693)
++|...+.||+|+||.||+|+.. ++..||||++...... .+++.+|++++.++ +|||||+++++|.+ +
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~ 147 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-D 147 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-C
Confidence 45677789999999999999852 2468999999754332 46799999999999 99999999999875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+..++||||+++|+|.+++....... ......++|.++.+|+.+++.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 67899999999999999998643210 01124599999999999999999999998 99999999999999
Q ss_pred CCCCceEECCcccccccCCCCc-ceeeeeehhhhhhh
Q 035786 653 DDKFEVRLGSLSELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
++++.+||+|||+++....... .......+|+.|+|
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~a 261 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 261 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSC
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeC
Confidence 9999999999999997643221 11222344555554
No 168
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.93 E-value=3.4e-26 Score=246.02 Aligned_cols=164 Identities=22% Similarity=0.247 Sum_probs=130.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHH-HhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDL-FSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...++||+|+||.||+|+.. +++.||||++..... ..+.+.+|..+ ++.++|||||++++++.+ ++..|+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-~~~~~l 116 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYF 116 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-SSEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-CCEEEE
Confidence 45788899999999999999975 588999999975432 23457778777 577899999999998875 468999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++++.. .+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 117 v~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~ 185 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGL 185 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCB
T ss_pred EEeCCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcc
Confidence 999999999999997642 488889999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... .....+||++|+|
T Consensus 186 a~~~~~~~~-~~~~~~gt~~y~a 207 (373)
T 2r5t_A 186 CKENIEHNS-TTSTFCGTPEYLA 207 (373)
T ss_dssp CGGGBCCCC-CCCSBSCCCCCCC
T ss_pred ccccccCCC-ccccccCCccccC
Confidence 987432221 1334678888876
No 169
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=7.9e-26 Score=239.50 Aligned_cols=167 Identities=22% Similarity=0.336 Sum_probs=134.2
Q ss_pred HhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcC--CCCCccceeEEEEcCC---CeeE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRV--SHARLVPLLGQCLEHE---TEKL 584 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l--~H~niv~l~g~~~~~~---~~~~ 584 (693)
..++|...+.||+|+||.||+|+.. |+.||||++.... ...+.+|.+++... +|||||++++++.... ...+
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 3456888999999999999999986 8999999985432 34456666666655 9999999999987642 4689
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~k 659 (693)
+||||+++|+|.++++. ..+++.++..++.+++.||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 112 lv~e~~~~g~L~~~l~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKS---------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp EEECCCTTCBHHHHHHH---------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred EEEeccCCCcHHHHhhc---------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 99999999999999975 24899999999999999999999763 45899999999999999999999
Q ss_pred ECCcccccccCCCCcc---eeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
|+|||+++........ ......||+.|+|
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 214 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCC
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeC
Confidence 9999999876332221 1123467777765
No 170
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.93 E-value=7e-26 Score=247.75 Aligned_cols=164 Identities=14% Similarity=0.249 Sum_probs=131.3
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---------CHHHHHHHHHHHhcCCCCCccceeEEEEcC
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---------KKESYMMELDLFSRVSHARLVPLLGQCLEH 579 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~ 579 (693)
..++|...+.||+|+||.||+|.. .+++.||||++..... ..+.|.+|++++++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 456788899999999999999986 4689999999865321 12358899999999999999999998753
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC---C
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK---F 656 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~---~ 656 (693)
+..++|||||++|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~ 279 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN--------KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDC 279 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSC
T ss_pred -CceEEEEEcCCCCcHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcc
Confidence 4689999999999999988643 3489999999999999999999998 89999999999999754 4
Q ss_pred ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 ~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+||+|||+++..+.... ....+||+.|+|
T Consensus 280 ~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~a 309 (419)
T 3i6u_A 280 LIKITDFGHSKILGETSL--MRTLCGTPTYLA 309 (419)
T ss_dssp CEEECCSSTTTSCC-------------CTTCC
T ss_pred eEEEeecccceecCCCcc--ccccCCCCCccC
Confidence 699999999998754332 344667777776
No 171
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.93 E-value=3.1e-26 Score=240.32 Aligned_cols=166 Identities=15% Similarity=0.205 Sum_probs=130.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCC---ee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHET---EK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~---~~ 583 (693)
++|...+.||+|+||.||+|+. .+++.||||++...... .+.|.+|++++.+++|||||++++++..... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 4577788999999999999995 57899999999754322 3578999999999999999999998864321 23
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++|+|.++++... .+++.+...++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG--------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred EEEEecCCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 89999999999999997532 489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCc--ceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~--~~~~~~~~~~~y~a 688 (693)
|+++....... ......+||+.|+|
T Consensus 161 g~a~~~~~~~~~~~~~~~~~gt~~y~a 187 (311)
T 3ork_A 161 GIARAIADSGNSVTQTAAVIGTAQYLS 187 (311)
T ss_dssp SCC------------------CCTTCC
T ss_pred cCcccccccccccccccccCcCcccCC
Confidence 99988743221 12233557777765
No 172
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.93 E-value=2.1e-26 Score=239.98 Aligned_cols=165 Identities=22% Similarity=0.360 Sum_probs=123.9
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhc--CCCCCccceeEEEEcCCC---eeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSR--VSHARLVPLLGQCLEHET---EKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~--l~H~niv~l~g~~~~~~~---~~~lv 586 (693)
++|...+.||+|+||.||+|+.. |+.||||++... ..+++.+|.+++.. ++||||+++++++.+... ..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 45778899999999999999875 889999998642 35668889999888 799999999999875432 57899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceEEC
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
|||+++|+|.+++++. .+++.++.+++.+++.||+|||... ..+|+||||||+|||++.++.+||+
T Consensus 80 ~e~~~~g~L~~~l~~~---------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNRY---------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EECCTTCCHHHHHHHC---------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BC
T ss_pred EeccCCCCHHHHHhcc---------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEe
Confidence 9999999999999652 3788889999999999999999321 3399999999999999999999999
Q ss_pred CcccccccCCCCcc---eeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
|||+++........ ......||+.|+|
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~a 180 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCC
T ss_pred ecCcceeccCCCcccccccCCCCcCccccC
Confidence 99999876433222 1233467777765
No 173
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.93 E-value=2.3e-26 Score=243.99 Aligned_cols=157 Identities=15% Similarity=0.180 Sum_probs=130.0
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---------CHHHHHHHHHHHhcCC---------CCCccceeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---------KKESYMMELDLFSRVS---------HARLVPLLG 574 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---------~~~~f~~Ei~~l~~l~---------H~niv~l~g 574 (693)
+|...+.||+|+||.||+|+. +|+.||||++..... ..+.+.+|++++++++ |||||++.+
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~ 99 (336)
T 2vuw_A 21 KLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNS 99 (336)
T ss_dssp HHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEE
T ss_pred cchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcc
Confidence 366778999999999999998 689999999975421 1367999999999886 888888888
Q ss_pred EEEc-----------------------------CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHH
Q 035786 575 QCLE-----------------------------HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGA 625 (693)
Q Consensus 575 ~~~~-----------------------------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~i 625 (693)
.+.. .+...++||||+++|++.+.+.+ ..+++.....|+.|+
T Consensus 100 ~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---------~~~~~~~~~~i~~qi 170 (336)
T 2vuw_A 100 VHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---------KLSSLATAKSILHQL 170 (336)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---------TCCCHHHHHHHHHHH
T ss_pred eeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---------cCCCHHHHHHHHHHH
Confidence 6531 14678999999999987776643 248999999999999
Q ss_pred HHHHhhhc-cCCCCCeEecCCCCCCeeeCCCC--------------------ceEECCcccccccCCCCcceeeeeehhh
Q 035786 626 AEGLSYLH-HECNPPLVHRDVQASSILLDDKF--------------------EVRLGSLSELHAQGDSHQNVLTRFLWRQ 684 (693)
Q Consensus 626 a~gl~yLH-~~~~p~iiHrDlk~~NILld~~~--------------------~~ki~Dfgla~~~~~~~~~~~~~~~~~~ 684 (693)
+.||+||| .. +||||||||+|||++.++ .+||+|||+|+...+. ..+||+
T Consensus 171 ~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~ 241 (336)
T 2vuw_A 171 TASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCD 241 (336)
T ss_dssp HHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCC
T ss_pred HHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEee
Confidence 99999999 77 899999999999999887 9999999999987433 246777
Q ss_pred hhhh
Q 035786 685 LYQS 688 (693)
Q Consensus 685 ~y~a 688 (693)
.|||
T Consensus 242 ~y~a 245 (336)
T 2vuw_A 242 VSMD 245 (336)
T ss_dssp CTTC
T ss_pred cccC
Confidence 7775
No 174
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.93 E-value=5.9e-26 Score=240.82 Aligned_cols=164 Identities=21% Similarity=0.268 Sum_probs=140.0
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---------CHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---------KKESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.|.+|++++.+++|||||+++++|.+ +
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~ 101 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN-Q 101 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-S
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-C
Confidence 45688889999999999999985 5689999999975432 23467889999999999999999999875 4
Q ss_pred CeeEEEEccCCCC-ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 581 TEKLLVYKYMVCG-DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 581 ~~~~lv~ey~~~G-sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
+..++||||+..| +|.+++... ..+++..+..|+.+++.||+|||.. +|+||||||+|||+++++.+|
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 170 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH--------PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIK 170 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEE
T ss_pred CEEEEEEEeCCCCccHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEE
Confidence 6789999999887 999999753 2489999999999999999999998 999999999999999999999
Q ss_pred ECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|||+++....... ....+||+.|+|
T Consensus 171 L~Dfg~a~~~~~~~~--~~~~~gt~~y~a 197 (335)
T 3dls_A 171 LIDFGSAAYLERGKL--FYTFCGTIEYCA 197 (335)
T ss_dssp ECCCTTCEECCTTCC--BCEECSCGGGCC
T ss_pred EeecccceECCCCCc--eeccCCCccccC
Confidence 999999998754333 334567888876
No 175
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=3.7e-24 Score=243.87 Aligned_cols=256 Identities=25% Similarity=0.290 Sum_probs=214.1
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
..++.|++++|.+. .+|..+ .++|++|+|++|.++ .+|. .+++|++|+|++|++++ +|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCL---PAHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCC---CTTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhh---CCCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEE
Confidence 35889999999988 888765 379999999999998 4666 57899999999999984 665 789999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
|++|.+++ +|. .+++|+.|++++|.+++ +|.. +++|++|+|++|++++ +|. .+.+|+.|++++|.+++
T Consensus 108 Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~ 175 (622)
T 3g06_A 108 IFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS 175 (622)
T ss_dssp ECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC
Confidence 99999986 555 67899999999999985 6654 4899999999999986 454 35689999999999996
Q ss_pred cCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCc
Q 035786 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILST 332 (693)
Q Consensus 253 ~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~ 332 (693)
+| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.++. +|.. +++|+.|+|++|+|++ +|
T Consensus 176 -l~---~~~~~L~~L~Ls~N~l~~-l~~----~~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---- 237 (622)
T 3g06_A 176 -LP---MLPSGLQELSVSDNQLAS-LPT----LPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---- 237 (622)
T ss_dssp -CC---CCCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC----
T ss_pred -Cc---ccCCCCcEEECCCCCCCC-CCC----ccchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC----
Confidence 55 567899999999999985 553 34789999999999985 4543 4899999999999996 66
Q ss_pred CCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecCCCcC-----cccccCCCcCCCCc
Q 035786 333 NGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSVA 393 (693)
Q Consensus 333 ~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~~ 393 (693)
..+++|+.|++++|+++. +|. .+++|+.|+|++|.++ .+|..+. ..+++++|.+.+..
T Consensus 238 ~~l~~L~~L~Ls~N~L~~-lp~-~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 238 VLPSELKELMVSGNRLTS-LPM-LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERT 300 (622)
T ss_dssp CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHH
T ss_pred CCCCcCcEEECCCCCCCc-CCc-ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcC
Confidence 345789999999999984 665 7789999999999999 7887664 35788999887653
No 176
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.93 E-value=1.6e-25 Score=242.63 Aligned_cols=167 Identities=21% Similarity=0.245 Sum_probs=138.8
Q ss_pred CCCCccCccccC--CeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKG--HSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G--~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+| +||.||+|+.. +|+.||||++...... .+.+.+|++++++++|||||++++++.+ ++..++
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~l 103 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWV 103 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-CCEEEE
Confidence 347778899999 99999999975 6999999999754433 3578889999999999999999999876 468999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|||||++|+|.+++..... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||.
T Consensus 104 v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~ 174 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM------DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRS 174 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGG
T ss_pred EEEccCCCCHHHHHhhhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccc
Confidence 9999999999999976432 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCC------Ccceeeeeehhhhhhh
Q 035786 666 LHAQGDS------HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~------~~~~~~~~~~~~~y~a 688 (693)
+....+. ........+||++|+|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 203 (389)
T 3gni_B 175 NLSMISHGQRQRVVHDFPKYSVKVLPWLS 203 (389)
T ss_dssp CEECEETTEECSCBCCCCTTCTTTGGGSC
T ss_pred ceeeccccccccccccccccccccccccC
Confidence 8765211 1111122467777765
No 177
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.3e-25 Score=230.95 Aligned_cols=225 Identities=20% Similarity=0.186 Sum_probs=127.3
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
.+..+++..+.+.... .+..+++|+.|++++|.+.. + +.+..+++|++|+|++|.+++ + ..+..+++|++|+++
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECC
Confidence 4444555555554432 23455666666666666552 2 235566666666666666654 2 245555666666666
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++..|..+..+++|++|++++|++++..|..|+.+++|++|++++|++++..+..+.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------------------- 154 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD------------------- 154 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT-------------------
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhc-------------------
Confidence 6665554444455555555555555555555444455555555555555555544444444
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCC
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFR 358 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~ 358 (693)
.+++|+.|++++|++++..+..+..+++|+.|++++|++++..| ..+..++.|+.|++++|.+.|.+|
T Consensus 155 ------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~~~~~~~----- 222 (272)
T 3rfs_A 155 ------KLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD-GVFDRLTSLQYIWLHDNPWDCTCP----- 222 (272)
T ss_dssp ------TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT-TTTTTCTTCCEEECCSSCBCCCTT-----
T ss_pred ------cCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH-HHHhCCcCCCEEEccCCCccccCc-----
Confidence 44555555555555554444445555555555555555554333 234455556666666666655443
Q ss_pred CCCEEEccCCcceeecCCCcCc
Q 035786 359 KFSLIDLSSNYFQGTVADDRGR 380 (693)
Q Consensus 359 ~l~~ldLs~N~l~g~ip~~~~~ 380 (693)
.++.++++.|.++|.+|.+++.
T Consensus 223 ~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 223 GIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp TTHHHHHHHHHTGGGBBCTTSC
T ss_pred HHHHHHHHHHhCCCcccCcccc
Confidence 5667788888888888887654
No 178
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.93 E-value=2.2e-25 Score=235.46 Aligned_cols=157 Identities=17% Similarity=0.208 Sum_probs=123.8
Q ss_pred cCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 517 TNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
.+.||+|+||.||+|+.. +|+.||||++... ..+.+.+|++++.+++ |||||++++++.+ +...++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHD-QLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-CCEEEEEEEccCCCc
Confidence 478999999999999974 6899999999643 3466889999999997 9999999999875 468899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---ceEECCcccccccCC
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF---EVRLGSLSELHAQGD 671 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~---~~ki~Dfgla~~~~~ 671 (693)
|.+++... ..+++.++..|+.+++.||+|||+. +|+||||||+|||++.+. .+||+|||+++....
T Consensus 93 L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 93 LFERIKKK--------KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp HHHHHHHC--------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred HHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 99999763 3489999999999999999999998 999999999999997655 899999999987643
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... ....++|++|+|
T Consensus 162 ~~~~-~~~~~~t~~y~a 177 (325)
T 3kn6_A 162 DNQP-LKTPCFTLHYAA 177 (325)
T ss_dssp -----------------
T ss_pred CCCc-ccccCCCcCccC
Confidence 3222 334567777776
No 179
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.92 E-value=7.4e-26 Score=250.59 Aligned_cols=162 Identities=20% Similarity=0.281 Sum_probs=129.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-----C
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-----T 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~ 581 (693)
.++|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+++++.++|||||++++++...+ .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 35678889999999999999985 46899999999754322 467889999999999999999999986432 3
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++|||||+++ |.+.+.. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~----------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~ 206 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM----------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 206 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred eEEEEEeCCCCC-HHHHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEE
Confidence 569999999864 6666642 389999999999999999999998 99999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++..+.... .+..+||++|+|
T Consensus 207 DFG~a~~~~~~~~--~~~~~gt~~y~a 231 (464)
T 3ttj_A 207 DFGLARTAGTSFM--MTPYVVTRYYRA 231 (464)
T ss_dssp CCCCC-----CCC--C----CCCTTCC
T ss_pred EEEeeeecCCCcc--cCCCcccccccC
Confidence 9999998754332 455678888876
No 180
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.92 E-value=1.3e-25 Score=234.11 Aligned_cols=165 Identities=21% Similarity=0.346 Sum_probs=134.4
Q ss_pred CCccCccccCCeeeEEEEEe-----CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~l 585 (693)
|...+.||+|+||.||+|++ .+++.||||++..... ..+.+.+|++++.+++||||+++++++.+.+ ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 66778999999999999984 3588999999975432 3578999999999999999999999987532 45789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPKNK-------NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEECCTTCBHHHHHHHHT-------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEeCCCCcHHHHHHhcc-------ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 999999999999996533 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCc--ceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~--~~~~~~~~~~~y~a 688 (693)
++....... .......+|..|+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~a 197 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYA 197 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCC
T ss_pred cccccCCCcceeccCCCCCCccccC
Confidence 998744322 11223445555544
No 181
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.92 E-value=5.9e-26 Score=239.75 Aligned_cols=164 Identities=20% Similarity=0.298 Sum_probs=131.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcE----EEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTT----VVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~----vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||.||+|+.. +++. ||+|.+..... ..+.+.+|++++++++|||||+++++|.+ ...++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~ 91 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG--SSLQL 91 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB--SSEEE
T ss_pred HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CccEE
Confidence 4667789999999999999964 4543 88888754322 23568889999999999999999998853 56899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 92 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 161 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR-------GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGV 161 (325)
T ss_dssp EEECCTTCBSHHHHHSSG-------GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred EEEeCCCCCHHHHHHHcc-------ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCc
Confidence 999999999999997532 3488999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCc-ceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
++....... ...+...++..|+|
T Consensus 162 a~~~~~~~~~~~~~~~~~~~~y~a 185 (325)
T 3kex_A 162 ADLLPPDDKQLLYSEAKTPIKWMA 185 (325)
T ss_dssp GGGSCCCTTCCC-----CCTTTSC
T ss_pred ccccCcccccccccCCCCcccccC
Confidence 998743322 22333455556654
No 182
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.92 E-value=1.9e-25 Score=234.04 Aligned_cols=164 Identities=19% Similarity=0.233 Sum_probs=133.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++||||++++++|.+ ++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-KRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-CCeEEEEE
Confidence 45777889999999999999975 5899999998654433 4578899999999999999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++.. ..+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 e~~~~~~l~~~~~~~--------~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 150 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ--------RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFAR 150 (311)
T ss_dssp ECCSEEHHHHHHHTS--------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EeCCCchHHHHHhhh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCch
Confidence 999999999988643 3489999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
........ .+...+|++|+|
T Consensus 151 ~~~~~~~~-~~~~~~~~~y~a 170 (311)
T 4agu_A 151 LLTGPSDY-YDDEVATRWYRS 170 (311)
T ss_dssp ECC-------------GGGCC
T ss_pred hccCcccc-cCCCcCCccccC
Confidence 87433222 234567777765
No 183
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1.2e-25 Score=238.99 Aligned_cols=174 Identities=22% Similarity=0.341 Sum_probs=137.0
Q ss_pred hCCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHS--FKKESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
.++|...+.||+|+||.||+|+. .++..||||.+.... ...+.+.+|++++.++ +||||++++++|.. ++
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-SG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee-CC
Confidence 35677888999999999999995 245689999997532 2256799999999999 99999999999875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC---------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE---------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQ 646 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~---------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk 646 (693)
..++||||+++|+|.+++....... ......++|..+..++.+++.||+|||.. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 7899999999999999998643210 00123489999999999999999999998 99999999
Q ss_pred CCCeeeCCCCceEECCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 647 ASSILLDDKFEVRLGSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 647 ~~NILld~~~~~ki~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
|+||+++.++.+||+|||+++........ ......+|+.|+|
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a 242 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA 242 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccC
Confidence 99999999999999999999876433221 2233445566654
No 184
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.92 E-value=1.6e-25 Score=234.31 Aligned_cols=166 Identities=24% Similarity=0.322 Sum_probs=134.3
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc------CHHHHHHHHHHHhcCC---CCCccceeEEEEcCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF------KKESYMMELDLFSRVS---HARLVPLLGQCLEHE 580 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~------~~~~f~~Ei~~l~~l~---H~niv~l~g~~~~~~ 580 (693)
+++|...+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++++.+++ |||||+++++|....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56788899999999999999995 5689999999864221 1356778888877775 999999999997643
Q ss_pred C----eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC
Q 035786 581 T----EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF 656 (693)
Q Consensus 581 ~----~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~ 656 (693)
. ..++||||++ |+|.+++..... ..+++.++..|+.+++.||+|||+. +|+||||||+||++++++
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~ 157 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPP------PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGG 157 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCT------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCC
Confidence 2 4689999997 699999975432 3489999999999999999999998 899999999999999999
Q ss_pred ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 ~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+||+|||+++....... .+...||++|+|
T Consensus 158 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~a 187 (308)
T 3g33_A 158 TVKLADFGLARIYSYQMA--LTPVVVTLWYRA 187 (308)
T ss_dssp CEEECSCSCTTTSTTCCC--SGGGGCCCSSCC
T ss_pred CEEEeeCccccccCCCcc--cCCccccccccC
Confidence 999999999988743322 233456666655
No 185
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.92 E-value=9.8e-26 Score=244.82 Aligned_cols=166 Identities=19% Similarity=0.329 Sum_probs=137.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~lv~e 588 (693)
.|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+.+ ...++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 4667789999999999999975 58999999997533 23567889999999999999999999987543 25789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee----CCCCceEECCcc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----DDKFEVRLGSLS 664 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----d~~~~~ki~Dfg 664 (693)
|+++|+|.++++.... ...+++..+..++.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 90 ~~~~g~L~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSN-----AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp CCTTEEHHHHTTSGGG-----TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred cCCCCCHHHHHHhhhc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 9999999999975321 13489999999999999999999998 99999999999999 788889999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||+.|+|
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~a 183 (396)
T 4eut_A 162 AARELEDDEQ--FVSLYGTEEYLH 183 (396)
T ss_dssp GCEECCCGGG--SSCSSSCCTTCC
T ss_pred CceEccCCCc--cccccCCccccC
Confidence 9998744322 223456666654
No 186
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=3.7e-25 Score=232.03 Aligned_cols=203 Identities=20% Similarity=0.186 Sum_probs=100.3
Q ss_pred CCCccEEEecCCCCCcCCCccc--CCCccCCEEecccCcCCccCc----cccCCCCCCCEEEccCCCCCCcCchhhhcCc
Q 035786 117 LPALQVLDLRSCSLSGSIPGSF--GNLSRLNVLYLSGNSLAGNVP----ATLGELKKLSNLDLSRNLLTGEIPNAISLLG 190 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 190 (693)
+++|++|+|++|.+++..|..+ +++++|++|+|++|.+++..| ..+..+++|++|+|++|.+++..|..+..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3445666666665555555555 555555555555555554333 2233445555555555555444444444455
Q ss_pred CCCeeecccccCCCc--CcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCch----hhhcCccc
Q 035786 191 NLTRLNLASNFFTGQ--IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL----ELRGLRNL 264 (693)
Q Consensus 191 ~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L 264 (693)
+|++|+|++|++.+. ++. +..++.+++|++|++++|+++. +|. .+..+++|
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~----------------------~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L 226 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMA----------------------ALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQP 226 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHT----------------------TSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCC
T ss_pred CCCEEECCCCCCccchhhhH----------------------HHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCC
Confidence 555555555544331 111 1122344455555555555542 111 13445555
Q ss_pred cccccccccccccCCCcccCCC---CCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEE
Q 035786 265 AKLVISENGLEGQLSEGLFPTL---DQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVF 341 (693)
Q Consensus 265 ~~L~Ls~N~l~g~i~~~~~~~l---~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l 341 (693)
++|+|++|++++.+|+.+ ..+ ++|+.|++++|+++ .+|..+. ++|+.|+|++|+|++. |. ...++.|+.|
T Consensus 227 ~~L~Ls~N~l~~~~p~~~-~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~--~~~l~~L~~L 299 (310)
T 4glp_A 227 HSLDLSHNSLRATVNPSA-PRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ--PDELPEVDNL 299 (310)
T ss_dssp SSEECTTSCCCCCCCSCC-SSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC--TTSCCCCSCE
T ss_pred CEEECCCCCCCccchhhH-HhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch--hhhCCCccEE
Confidence 555555555554444332 222 45666666666665 3444443 5666666666666542 21 2344556666
Q ss_pred EccCCccc
Q 035786 342 NISNNMLY 349 (693)
Q Consensus 342 ~ls~N~l~ 349 (693)
++++|+++
T Consensus 300 ~L~~N~l~ 307 (310)
T 4glp_A 300 TLDGNPFL 307 (310)
T ss_dssp ECSSTTTS
T ss_pred ECcCCCCC
Confidence 66666654
No 187
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.92 E-value=2.5e-25 Score=228.98 Aligned_cols=163 Identities=15% Similarity=0.207 Sum_probs=138.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc-cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS-FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||.||+|+.. ++..||+|++.... ...+.|.+|++++.+++||||++++++|.+ +...++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 87 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-NTDIYLVMEL 87 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeEEEEEec
Confidence 34777889999999999999975 47899999997543 336789999999999999999999999875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla 666 (693)
+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 88 ~~~~~L~~~~~~~~--------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 88 CTGGELFERVVHKR--------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp CCSCBHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred cCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 99999999987542 489999999999999999999998 99999999999999 78899999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+|+.|+|
T Consensus 157 ~~~~~~~~--~~~~~~t~~y~a 176 (277)
T 3f3z_A 157 ARFKPGKM--MRTKVGTPYYVS 176 (277)
T ss_dssp EECCTTSC--BCCCCSCTTTCC
T ss_pred eeccCccc--hhccCCCCCccC
Confidence 88643322 233456777765
No 188
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.92 E-value=1.8e-25 Score=239.62 Aligned_cols=173 Identities=20% Similarity=0.288 Sum_probs=137.1
Q ss_pred CHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC------------HHHHHHHHHHHhcCCCCCcc
Q 035786 503 TYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK------------KESYMMELDLFSRVSHARLV 570 (693)
Q Consensus 503 ~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~------------~~~f~~Ei~~l~~l~H~niv 570 (693)
...++....++|...+.||+|+||.||+|...+|+.||||++...... .+.|.+|++++.+++|||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456777888999999999999999999999888999999998542211 26799999999999999999
Q ss_pred ceeEEEEcCC----CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCC
Q 035786 571 PLLGQCLEHE----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQ 646 (693)
Q Consensus 571 ~l~g~~~~~~----~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk 646 (693)
++++++...+ ...++||||++ |+|.+++.... ..+++..+..++.+++.||+|||+. +|+|||||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 161 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-------IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLH 161 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCC
Confidence 9999986432 25789999998 78998887432 3589999999999999999999998 99999999
Q ss_pred CCCeeeCCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 647 ASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 647 ~~NILld~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+||+++.++.+||+|||+++....... .+...+|++|+|
T Consensus 162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~a 201 (362)
T 3pg1_A 162 PGNILLADNNDITICDFNLAREDTADAN--KTHYVTHRWYRA 201 (362)
T ss_dssp GGGEEECTTCCEEECCTTC-----------------CGGGCC
T ss_pred hHHEEEcCCCCEEEEecCcccccccccc--cceecccceecC
Confidence 9999999999999999999986533222 233566777765
No 189
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.92 E-value=1.2e-25 Score=237.87 Aligned_cols=164 Identities=18% Similarity=0.196 Sum_probs=137.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|++++.++ +||||+++++++.. +...++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-GKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-TTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEec-CCccEEEEEe
Confidence 4577788999999999999995 578999999986543 234688999999999 99999999998876 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc-----eEECCcc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE-----VRLGSLS 664 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~-----~ki~Dfg 664 (693)
+ +|+|.+++.... ..+++.++..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 87 ~-~~~L~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 87 L-GPSLEDLFDLCD-------RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp C-CCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred C-CCCHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 9 999999997532 3599999999999999999999998 9999999999999999887 9999999
Q ss_pred cccccCCCCcc------eeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~------~~~~~~~~~~y~a 688 (693)
+++.+.+.... ......||+.|+|
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 185 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMS 185 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCC
T ss_pred cceeeecCCCCccccccccCCcCCCccccC
Confidence 99986332211 1234678888876
No 190
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=5.2e-25 Score=226.45 Aligned_cols=201 Identities=26% Similarity=0.326 Sum_probs=121.5
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|+.|++++|.++. + +.++.+++|++|+|++|.+++. +.+..+++|++|+|++|.+++..|..+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 5566666666666542 2 2355566666666666666542 2456666666666666666655555556666666666
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.+++..|..+..+++|++|++++|++++..|..++.+++|++|++++|++++..+..+..+++|++|++++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 66666665555555666666666666666665555555666666666666666665555555666666666666666664
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
. ++..|..+++|+.|++++|.+.+. +++|+.|+++.|+++|.+|.
T Consensus 196 ~-~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 196 V-PDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp C-CTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred c-CHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 3 333445666666666666666543 33566666666777776664
No 191
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.92 E-value=3e-25 Score=233.55 Aligned_cols=163 Identities=24% Similarity=0.370 Sum_probs=134.9
Q ss_pred CCccCccccCCeeeEEEEEeC-----CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-----GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-----~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~l 585 (693)
|...+.||+|+||.||++.+. +|+.||||++..... ..+.|.+|++++++++|||||++++++.+. ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 466789999999999998753 588999999975432 246799999999999999999999999764 346789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++... .+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 113 v~e~~~~~~L~~~l~~~---------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 180 (318)
T ss_dssp EECCCTTCBHHHHGGGS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred EEecccCCcHHHHHhhC---------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccc
Confidence 99999999999999652 389999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcc--eeeeeehhhhhhh
Q 035786 666 LHAQGDSHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~--~~~~~~~~~~y~a 688 (693)
++........ ......+++.|+|
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~a 205 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYA 205 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCC
T ss_pred cccccccccccccccCCCCCceeeC
Confidence 9987443221 1233445555654
No 192
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.92 E-value=1e-25 Score=258.51 Aligned_cols=158 Identities=20% Similarity=0.306 Sum_probs=128.5
Q ss_pred CccccCCeeeEEEEEeC---CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+.||+|+||.||+|.+. .++.||||+++..... .++|.+|+++|.+++|||||+++++|.. +..++|||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEEEccC
Confidence 47999999999999753 4678999999754332 5789999999999999999999999853 46889999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.++++.. ..++|.++..|+.||+.||+|||+. +||||||||+|||+++++.+||+|||+++.+..
T Consensus 453 ~g~L~~~l~~~--------~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 453 LGPLNKYLQQN--------RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521 (635)
T ss_dssp TEEHHHHHHHC--------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred CCCHHHHHhhC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence 99999999753 3489999999999999999999998 999999999999999999999999999998743
Q ss_pred CCc--ceeeeeehhhhhhh
Q 035786 672 SHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~--~~~~~~~~~~~y~a 688 (693)
... ...+...+++.|+|
T Consensus 522 ~~~~~~~~~~~~~t~~y~A 540 (635)
T 4fl3_A 522 DENYYKAQTHGKWPVKWYA 540 (635)
T ss_dssp -------------CGGGSC
T ss_pred CccccccccCCCCceeeeC
Confidence 221 12233344555654
No 193
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.92 E-value=1.6e-25 Score=229.32 Aligned_cols=149 Identities=23% Similarity=0.452 Sum_probs=129.0
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~lv~e 588 (693)
+|...+.||+|+||.||+|+.. |+.||||++...... .++|.+|++++.+++|||||+++++|.+. ....++|||
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (271)
T 3kmu_A 11 QLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH 89 (271)
T ss_dssp GCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred HhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence 4677889999999999999985 889999999764432 45799999999999999999999998753 246799999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.... ..+++.++..++.+++.||+|||+. .++|+||||||+||++++++.+||+|||++..
T Consensus 90 ~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 90 WMPYGSLYNVLHEGTN------FVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp CCTTCBHHHHHHSCSS------CCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ccCCCcHHHHHhhccc------CCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 9999999999985332 3589999999999999999999986 33499999999999999999999999988765
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 163 ~ 163 (271)
T 3kmu_A 163 F 163 (271)
T ss_dssp T
T ss_pred e
Confidence 4
No 194
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.92 E-value=1.3e-25 Score=237.81 Aligned_cols=165 Identities=23% Similarity=0.398 Sum_probs=129.4
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHH--HhcCCCCCccceeEEEEc----CCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDL--FSRVSHARLVPLLGQCLE----HETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~--l~~l~H~niv~l~g~~~~----~~~~~~l 585 (693)
++|...+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++||||+++++++.. .....++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 4577788999999999999987 58999999996533 3345555544 556899999999986532 1224689
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC------CCCeEecCCCCCCeeeCCCCceE
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC------NPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~------~p~iiHrDlk~~NILld~~~~~k 659 (693)
||||+++|+|.+++... ..+|..+.+|+.++++||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 90 v~e~~~~g~L~~~l~~~---------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLH---------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EECCCTTCBHHHHHHHC---------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred EEecCCCCcHHHHHhhc---------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 99999999999999753 3689999999999999999999874 44899999999999999999999
Q ss_pred ECCcccccccCCCC-------cceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSH-------QNVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~-------~~~~~~~~~~~~y~a 688 (693)
|+|||+++.+.... .......+||+.|+|
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 196 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeC
Confidence 99999998864321 111223457777765
No 195
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.92 E-value=1.3e-25 Score=235.44 Aligned_cols=156 Identities=24% Similarity=0.377 Sum_probs=131.0
Q ss_pred CCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|+. .+++.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 101 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-DGPL 101 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSC
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec-CCce
Confidence 4567778999999999999985 34588999999754322 4679999999999999999999998875 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCC----------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLE----------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~----------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~ 647 (693)
++||||+++|+|.++++...... ......+++.++.+++.++++||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 99999999999999998643210 00113489999999999999999999998 999999999
Q ss_pred CCeeeCCCCceEECCcccccccCC
Q 035786 648 SSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 648 ~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+||++++++.+||+|||+++....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~ 202 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYE 202 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTT
T ss_pred heEEEcCCCCEEEccccccccccc
Confidence 999999999999999999987643
No 196
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.92 E-value=1.4e-25 Score=235.05 Aligned_cols=173 Identities=24% Similarity=0.340 Sum_probs=138.3
Q ss_pred CCCCccCccccCCeeeEEEEEe------CCCcEEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 582 (693)
++|...+.||+|+||.||+|+. .+++.||||++..... ..+.|.+|++++.++ +||||++++++|.+ ++.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~ 101 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-GGP 101 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSS
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-CCC
Confidence 4577788999999999999984 3468999999975432 246799999999999 99999999999875 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCC----------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE----------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~----------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
.++||||+++|+|.+++....... ......+++.++.+++.++++||+|||+. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 899999999999999998643210 01123599999999999999999999998 99999999999999
Q ss_pred CCCCceEECCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 653 DDKFEVRLGSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
++++.+||+|||+++........ ......+|+.|+|
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a 215 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 215 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCC
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeC
Confidence 99999999999999987443322 1222334555544
No 197
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1.7e-25 Score=240.34 Aligned_cols=161 Identities=19% Similarity=0.320 Sum_probs=130.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-----C
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-----T 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~ 581 (693)
.+.|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++...+ .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 34577888999999999999996 56999999999643322 457889999999999999999999886432 2
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++||||| +++|.++++. ..+++.....++.|+++||+|||+. +|+||||||+|||+++++.+||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---------~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 170 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---------EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKIL 170 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred eEEEEEecC-CCCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEE
Confidence 459999999 8899999875 2489999999999999999999998 99999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++..... .+..++|++|+|
T Consensus 171 Dfg~a~~~~~~----~~~~~~t~~y~a 193 (367)
T 1cm8_A 171 DFGLARQADSE----MTGYVVTRWYRA 193 (367)
T ss_dssp CCTTCEECCSS----CCSSCSCGGGCC
T ss_pred eeecccccccc----cCcCcCCCCcCC
Confidence 99999986433 234567888876
No 198
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.92 E-value=1.3e-25 Score=237.20 Aligned_cols=166 Identities=19% Similarity=0.239 Sum_probs=137.6
Q ss_pred CCCccCccccCCeeeEEEEEe-----CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~l 585 (693)
+|...+.||+|+||.||+|++ .+++.||||++...... .+.|.+|++++.+++||||+++++++... +...++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 467788999999999999984 35889999999754333 46799999999999999999999998742 346789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... ..+++.++..|+.+++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRHR-------ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEECCTTCBHHHHHHHHG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEeecCCCCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 999999999999997532 2489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcc--eeeeeehhhhhhh
Q 035786 666 LHAQGDSHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~--~~~~~~~~~~y~a 688 (693)
++........ ......+|+.|+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~a 198 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYA 198 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSC
T ss_pred ceecccCCccceeeccCCccccccC
Confidence 9987433221 1223445555654
No 199
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=4.5e-24 Score=219.19 Aligned_cols=201 Identities=25% Similarity=0.269 Sum_probs=124.3
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
.++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...+..+..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4677888888877 3565553 567788888888776666677777888888888877775544555667777777777
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++..+..+..+++|++|++++|++++..|..|+.+++|++|++++|.+++..+..|..+++|++|+|++|.+++ +
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR-V 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-C
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE-e
Confidence 777766555556667777777777777766666666666667777776666665544445555555555555555543 2
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcC
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l 323 (693)
+...|..+++|+.|++++|++++..+..+..+++|+.|+|++|.+
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCe
Confidence 333334444455555555444443333344444444444444443
No 200
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.92 E-value=1.1e-25 Score=234.23 Aligned_cols=150 Identities=20% Similarity=0.340 Sum_probs=131.5
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcC----------
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH---------- 579 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---------- 579 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++.......+.+.+|++++.+++||||++++++|.+.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 34577889999999999999996 4789999999975444457799999999999999999999988652
Q ss_pred --CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 580 --ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 580 --~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
....++||||+++|+|.++++... ..+++.++..++.++++||+|||+. +|+||||||+||+++.++.
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSEN-------LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSC-------GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccc-------cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 235789999999999999997532 3478899999999999999999998 9999999999999999999
Q ss_pred eEECCcccccccC
Q 035786 658 VRLGSLSELHAQG 670 (693)
Q Consensus 658 ~ki~Dfgla~~~~ 670 (693)
+||+|||+++...
T Consensus 155 ~kl~dfg~~~~~~ 167 (303)
T 1zy4_A 155 VKIGDFGLAKNVH 167 (303)
T ss_dssp EEECCCCCCSCTT
T ss_pred EEEeeCcchhhcc
Confidence 9999999998764
No 201
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.92 E-value=8.8e-26 Score=236.90 Aligned_cols=183 Identities=18% Similarity=0.228 Sum_probs=144.1
Q ss_pred CHHHHHHHhCCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCcccee
Q 035786 503 TYEQLLRATGNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLL 573 (693)
Q Consensus 503 ~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~ 573 (693)
...++....++|...+.||+|+||.||+|+. .+++.||||.+...... .+.+.+|++++.++ +|||||+++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444444556788889999999999999984 34689999999754332 45799999999999 799999999
Q ss_pred EEEEcCCCeeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCC
Q 035786 574 GQCLEHETEKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDV 645 (693)
Q Consensus 574 g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDl 645 (693)
++|...+...++||||+++|+|.+++....... ......+++.++..++.+++.||+|||+. +|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 998765556899999999999999998643210 00012389999999999999999999998 9999999
Q ss_pred CCCCeeeCCCCceEECCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 646 QASSILLDDKFEVRLGSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 646 k~~NILld~~~~~ki~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
||+||++++++.+||+|||+++........ ......+|+.|+|
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a 218 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 218 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecC
Confidence 999999999999999999999987433222 2233455666655
No 202
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.92 E-value=1.5e-25 Score=236.17 Aligned_cols=155 Identities=20% Similarity=0.315 Sum_probs=120.8
Q ss_pred hCCCCccCccccCCeeeEEEEEeCC-C---cEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe-
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAG-G---TTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETE- 582 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~-g---~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~- 582 (693)
.++|...+.||+|+||.||+|+... + ..||||.+.... ...++|.+|++++++++|||||++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 3468888999999999999999754 3 279999987542 2256799999999999999999999998754221
Q ss_pred ----eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 583 ----KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 583 ----~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
.++||||+++|+|.+++...... .....+++.++.+|+.+++.||+|||+. +|+||||||+||++++++.+
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIG--ENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC-----CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhcc--ccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 28999999999999999753211 1123589999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccC
Q 035786 659 RLGSLSELHAQG 670 (693)
Q Consensus 659 ki~Dfgla~~~~ 670 (693)
||+|||+++...
T Consensus 177 kl~Dfg~a~~~~ 188 (323)
T 3qup_A 177 CVADFGLSRKIY 188 (323)
T ss_dssp EECCCCC-----
T ss_pred EEeecccccccc
Confidence 999999998863
No 203
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.92 E-value=1.9e-25 Score=258.06 Aligned_cols=165 Identities=17% Similarity=0.174 Sum_probs=139.2
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 584 (693)
.++|...++||+|+||.||+|+.. +++.||||++.... ...+.+..|.+++..+ +||||+++++++. .++..|
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~-~~~~~~ 418 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLY 418 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB-CSSEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE-eCCEEE
Confidence 456888899999999999999974 58899999997532 2346788999999988 7999999988665 456889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||+++|+|.++++... .+++.++..|+.+|+.||+|||+. +||||||||+|||||+++.+||+|||
T Consensus 419 lV~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFG 487 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFG 487 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecc
Confidence 9999999999999998643 489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++........ ....+||++|+|
T Consensus 488 la~~~~~~~~~-~~~~~GT~~Y~A 510 (674)
T 3pfq_A 488 MCKENIWDGVT-TKTFCGTPDYIA 510 (674)
T ss_dssp TCEECCCTTCC-BCCCCSCSSSCC
T ss_pred eeeccccCCcc-cccccCCCcccC
Confidence 99975322221 344678888876
No 204
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.92 E-value=2.5e-25 Score=230.38 Aligned_cols=166 Identities=15% Similarity=0.208 Sum_probs=134.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.|...+.||+|+||.||+|+. .+|..||||++..... ..+.+.+|++++.+++||||++++++|.+ ....++||||
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~ 101 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-YHNMYIVMET 101 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-CCeEEEEEEe
Confidence 477788999999999999996 4689999999875433 35789999999999999999999999875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla 666 (693)
+++|+|.+++..... ....+++..+.+|+.+++.||+|||.. +|+||||||+||++ +.++.+||+|||++
T Consensus 102 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 102 CEGGELLERIVSAQA----RGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp CSCCBHHHHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred CCCCcHHHHHHhhhh----cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 999999999964311 113599999999999999999999998 99999999999999 45688999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+|+.|+|
T Consensus 175 ~~~~~~~~--~~~~~~t~~y~a 194 (285)
T 3is5_A 175 ELFKSDEH--STNAAGTALYMA 194 (285)
T ss_dssp CC------------CTTGGGCC
T ss_pred eecCCccc--CcCcccccCcCC
Confidence 87643322 334567777765
No 205
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.92 E-value=1.9e-25 Score=255.59 Aligned_cols=140 Identities=20% Similarity=0.318 Sum_probs=125.3
Q ss_pred ccccCCeeeEEEEEeC---CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 519 LIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
.||+|+||.||+|.+. ++..||||+++.... ..++|.+|+++|++++|||||+++++|.. +..++|||||++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--CCeEEEEEeCCCC
Confidence 6999999999999864 467899999976432 36789999999999999999999999864 4689999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|.++++... ..++|.++..|+.||+.||+|||+. +||||||||+|||+++++.+||+|||+++...
T Consensus 421 ~L~~~l~~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 421 PLHKFLVGKR-------EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp BHHHHHTTCT-------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred cHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 9999997532 3589999999999999999999998 99999999999999999999999999999874
No 206
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.92 E-value=4.4e-25 Score=236.98 Aligned_cols=167 Identities=22% Similarity=0.311 Sum_probs=140.3
Q ss_pred HHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---------HHHHHHHHHHHhcC-CCCCccceeEEE
Q 035786 508 LRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---------KESYMMELDLFSRV-SHARLVPLLGQC 576 (693)
Q Consensus 508 ~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---------~~~f~~Ei~~l~~l-~H~niv~l~g~~ 576 (693)
....++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344556888899999999999999975 7999999998654321 34688999999999 799999999988
Q ss_pred EcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC
Q 035786 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF 656 (693)
Q Consensus 577 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~ 656 (693)
.. ....++||||+++|+|.+++... ..+++..+..++.+++.||.|||+. +|+||||||+||++++++
T Consensus 170 ~~-~~~~~lv~e~~~g~~L~~~l~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 170 ES-SSFMFLVFDLMRKGELFDYLTEK--------VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNM 237 (365)
T ss_dssp EB-SSEEEEEECCCTTCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred ee-CCEEEEEEEeCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence 75 46899999999999999999753 2489999999999999999999998 999999999999999999
Q ss_pred ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 ~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+||+|||+++.+..... ....+||+.|+|
T Consensus 238 ~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~a 267 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPGEK--LRELCGTPGYLA 267 (365)
T ss_dssp CEEECCCTTCEECCTTCC--BCCCCSCGGGCC
T ss_pred CEEEEecCcccccCCCcc--cccCCCCCCccC
Confidence 999999999988743322 233556666654
No 207
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.92 E-value=2.7e-25 Score=228.92 Aligned_cols=165 Identities=17% Similarity=0.265 Sum_probs=131.3
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+|+.||||.+.... ...+.+.+|++++.+++||||+++++++.+ ++..++|
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 89 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-SNYVYLV 89 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-SSEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-CCeEEEE
Confidence 4577788999999999999996 578999999996432 124679999999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... ..+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 90 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 159 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV-------KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA 159 (278)
T ss_dssp EECCTTEEHHHHHHTCS-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecce
Confidence 99999999999997532 3589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .....+|+.|+|
T Consensus 160 ~~~~~~~~~-~~~~~~~~~y~a 180 (278)
T 3cok_A 160 TQLKMPHEK-HYTLCGTPNYIS 180 (278)
T ss_dssp EECC------------------
T ss_pred eeccCCCCc-ceeccCCCCcCC
Confidence 886432221 223457777765
No 208
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.92 E-value=8e-26 Score=234.15 Aligned_cols=147 Identities=24% Similarity=0.378 Sum_probs=128.3
Q ss_pred CCCccCccccCCeeeEEEEEeCC-C-------cEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG-G-------TTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~-g-------~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
+|...+.||+|+||.||+|+... + ..||+|.+...... .+.|.+|++++.+++|||||+++++|.+ ++..
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 87 (289)
T 4fvq_A 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC-GDEN 87 (289)
T ss_dssp GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-TTCC
T ss_pred HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-CCCC
Confidence 46677899999999999998642 3 57999998654433 5789999999999999999999999875 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE------ 657 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~------ 657 (693)
++||||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK-------NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred EEEEECCCCCCHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 99999999999999997532 2489999999999999999999998 8999999999999998887
Q ss_pred --eEECCcccccccC
Q 035786 658 --VRLGSLSELHAQG 670 (693)
Q Consensus 658 --~ki~Dfgla~~~~ 670 (693)
+||+|||+++...
T Consensus 158 ~~~kl~Dfg~~~~~~ 172 (289)
T 4fvq_A 158 PFIKLSDPGISITVL 172 (289)
T ss_dssp CEEEECCCCSCTTTS
T ss_pred ceeeeccCccccccc
Confidence 9999999987763
No 209
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.92 E-value=1.4e-25 Score=240.19 Aligned_cols=165 Identities=18% Similarity=0.226 Sum_probs=139.7
Q ss_pred HHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-----CCCccceeEEEEcCCCe
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-----HARLVPLLGQCLEHETE 582 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-----H~niv~l~g~~~~~~~~ 582 (693)
...++|...+.||+|+||.||+|+. .+++.||||++.......+.+..|++++.+++ |||||++++++.. .+.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~-~~~ 110 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY-YDH 110 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE-TTE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE-CCe
Confidence 3456788899999999999999997 56899999999754444567888999999997 9999999999876 468
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC--------
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-------- 654 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-------- 654 (693)
.++||||+ +|+|.+++..... ..+++.+...++.|++.||+|||+. +|+||||||+|||+++
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~ 180 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNY------NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLI 180 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEE
T ss_pred eEEEEcCC-CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccccccc
Confidence 89999999 9999999986432 3489999999999999999999998 9999999999999986
Q ss_pred -----------------CCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 655 -----------------KFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 655 -----------------~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++.+||+|||+++....... ...||+.|+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~----~~~gt~~y~a 227 (360)
T 3llt_A 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG----SIINTRQYRA 227 (360)
T ss_dssp EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC----SCCSCGGGCC
T ss_pred chhcccccccccccccCCCCEEEEeccCceecCCCCc----CccCcccccC
Confidence 78999999999987644322 3456777765
No 210
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.92 E-value=3.6e-25 Score=227.68 Aligned_cols=162 Identities=16% Similarity=0.270 Sum_probs=119.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+ ++..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-CCeEEEE
Confidence 4578889999999999999985 5689999999865322 25678999999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+ +|+|.+++... ..+++.++.+++.+++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 92 ~e~~-~~~l~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 159 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR--------DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 159 (275)
T ss_dssp EECC-CEEHHHHHHTS--------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC
T ss_pred ehhc-CCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccc
Confidence 9999 67888888643 2489999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....||+.|+|
T Consensus 160 ~~~~~~~~--~~~~~~t~~y~a 179 (275)
T 2eue_A 160 NIMTDGNF--LKTSCGSPNYAA 179 (275)
T ss_dssp -----------------CTTCC
T ss_pred eeccCccc--ccCCCCCcCcCC
Confidence 87643322 223456666654
No 211
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.92 E-value=4.6e-25 Score=232.43 Aligned_cols=162 Identities=18% Similarity=0.237 Sum_probs=138.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
.|...+.||+|+||.||+|+.. +|+.||||.+..... ..++|.+|++++.+++||||+++++++.+ +...+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~ 91 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVV 91 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCEEE
Confidence 4777889999999999999974 689999999865322 25679999999999999999999999875 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----ceEE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF----EVRL 660 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~----~~ki 660 (693)
+||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++ .+||
T Consensus 92 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl 160 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQK--------ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKL 160 (321)
T ss_dssp EEECCCCSCBHHHHHHTC--------SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred EEEEcCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEE
Confidence 999999999999999753 3489999999999999999999998 999999999999999887 7999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++....... .....||+.|+|
T Consensus 161 ~Dfg~~~~~~~~~~--~~~~~gt~~y~a 186 (321)
T 2a2a_A 161 IDFGLAHEIEDGVE--FKNIFGTPEFVA 186 (321)
T ss_dssp CCCTTCEECCTTCC--CCCCCSCGGGCC
T ss_pred ccCccceecCcccc--ccccCCCCCccC
Confidence 99999998754322 233557777765
No 212
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.92 E-value=4.4e-25 Score=227.89 Aligned_cols=156 Identities=21% Similarity=0.335 Sum_probs=132.3
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
.++|...+.||+|+||.||+|+.. +++.||||++..... ..+++.+|+..+.++ +|||||++++++.+ ++..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-DDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-TTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEE
Confidence 345788899999999999999975 799999999875432 246788999999999 99999999999876 468899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-----------
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD----------- 654 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~----------- 654 (693)
||||+++|+|.+++..... ....+++.++..|+.|++.||+|||+. +|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~ 161 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYR----IMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEG 161 (289)
T ss_dssp EEECCTTCBHHHHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------
T ss_pred EEEecCCCcHHHHHHhhcc----cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccc
Confidence 9999999999999975321 113589999999999999999999998 9999999999999984
Q ss_pred --------CCceEECCcccccccCCCCc
Q 035786 655 --------KFEVRLGSLSELHAQGDSHQ 674 (693)
Q Consensus 655 --------~~~~ki~Dfgla~~~~~~~~ 674 (693)
...+||+|||+++.......
T Consensus 162 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 189 (289)
T 1x8b_A 162 DEDDWASNKVMFKIGDLGHVTRISSPQV 189 (289)
T ss_dssp --------CCCEEECCCTTCEETTCSCC
T ss_pred ccccccCCceEEEEcccccccccCCccc
Confidence 45899999999998755443
No 213
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.92 E-value=5.8e-25 Score=230.81 Aligned_cols=163 Identities=16% Similarity=0.231 Sum_probs=130.8
Q ss_pred CCc-cCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSE-TNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~-~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|.. .++||+|+||.||+|+. .+++.||||++...... .+.+.+|++++.++ +|||||++++++.+ ++..++||||
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~ 92 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-EDRFYLVFEK 92 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEEEc
Confidence 444 36899999999999995 47899999999754433 67899999999985 79999999999876 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---eEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---VRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ki~Dfgla 666 (693)
+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 93 ~~~~~L~~~l~~~~--------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 93 MRGGSILSHIHKRR--------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp CTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred CCCCcHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 99999999997642 489999999999999999999998 9999999999999998776 999999999
Q ss_pred cccCCCC------cceeeeeehhhhhhh
Q 035786 667 HAQGDSH------QNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~------~~~~~~~~~~~~y~a 688 (693)
+...... .......+||+.|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a 189 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMA 189 (316)
T ss_dssp C-------------------CCSGGGCC
T ss_pred cccccCCccccccccccccccCCcCccC
Confidence 8763211 111223457777765
No 214
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.92 E-value=2.9e-25 Score=235.33 Aligned_cols=156 Identities=16% Similarity=0.314 Sum_probs=130.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC--------CCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA--------GGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHE 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~ 580 (693)
++|...+.||+|+||.||+|+.. ++..||||++...... .+++.+|++++.++ +||||++++++|.+ +
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~ 113 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 113 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-C
Confidence 45777889999999999999863 4678999999754322 45799999999999 99999999999875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+..++||||+++|+|.+++....... ......++|.++.+++.+++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 67899999999999999998643210 00123589999999999999999999998 99999999999999
Q ss_pred CCCCceEECCcccccccCC
Q 035786 653 DDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~ 671 (693)
++++.+||+|||+++....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~ 209 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINN 209 (334)
T ss_dssp CTTCCEEECCCTTCEECTT
T ss_pred cCCCCEEEccccccccccc
Confidence 9999999999999988743
No 215
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.92 E-value=1.9e-25 Score=242.77 Aligned_cols=160 Identities=18% Similarity=0.223 Sum_probs=125.5
Q ss_pred CCcc-CccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHh-cCCCCCccceeEEEEc---CCCeeEEEE
Q 035786 514 FSET-NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFS-RVSHARLVPLLGQCLE---HETEKLLVY 587 (693)
Q Consensus 514 ~~~~-~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~-~l~H~niv~l~g~~~~---~~~~~~lv~ 587 (693)
|... ++||+|+||.||+|... +|+.||||++.. ...+.+|++++. ..+|||||++++++.. .+...++||
T Consensus 63 y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~ 138 (400)
T 1nxk_A 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138 (400)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence 4443 68999999999999864 689999999863 245778998874 4589999999998753 234578999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Dfg 664 (693)
|||++|+|.++++.... ..+++.++..|+.+|+.||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 139 E~~~gg~L~~~l~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 139 ECLDGGELFSRIQDRGD------QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp ECCCSEEHHHHHHCC---------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EeCCCCcHHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 99999999999975321 3599999999999999999999998 9999999999999998 7899999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .+..+||++|+|
T Consensus 210 ~a~~~~~~~~--~~~~~gt~~y~a 231 (400)
T 1nxk_A 210 FAKETTSHNS--LTTPCYTPYYVA 231 (400)
T ss_dssp TCEECC-------------CTTCC
T ss_pred cccccCCCCc--cccCCCCCCccC
Confidence 9998643322 345677888876
No 216
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.92 E-value=8e-26 Score=238.07 Aligned_cols=158 Identities=22% Similarity=0.358 Sum_probs=132.7
Q ss_pred HHhCCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
.+.++|...+.||+|+||.||+|+.. +++.||||++...... .++|.+|++++.+++||||+++++++.+ +
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~ 100 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-G 100 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS-S
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc-C
Confidence 34566888899999999999999864 3678999999754322 4579999999999999999999999865 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCC--CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDL--EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~--~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
+..++||||+++|+|.++++..... .......+++..+.+++.+++.||+|||+. +|+||||||+||++++++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeE
Confidence 6789999999999999999753210 001123579999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccC
Q 035786 659 RLGSLSELHAQG 670 (693)
Q Consensus 659 ki~Dfgla~~~~ 670 (693)
||+|||+++...
T Consensus 178 kl~Dfg~~~~~~ 189 (322)
T 1p4o_A 178 KIGDFGMTRDIY 189 (322)
T ss_dssp EECCTTCCCGGG
T ss_pred EECcCccccccc
Confidence 999999998763
No 217
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.92 E-value=2.6e-25 Score=228.01 Aligned_cols=163 Identities=22% Similarity=0.342 Sum_probs=125.8
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc-----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF-----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~-----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. |+.||||++..... ..+.+.+|++++++++||||++++++|.+ ++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 84 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-EPNLCLV 84 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-C--CEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-CCceEEE
Confidence 35677889999999999999975 88999999864322 24679999999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC--------CCce
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD--------KFEV 658 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~--------~~~~ 658 (693)
|||+++|+|.+++.. ..+++..+..++.++++||+|||+....+|+||||||+||++++ ++.+
T Consensus 85 ~e~~~~~~L~~~~~~---------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp EECCTTEEHHHHHTS---------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred EEcCCCCCHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcce
Confidence 999999999999853 34899999999999999999999984445999999999999996 6789
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++....... ....||+.|+|
T Consensus 156 kl~Dfg~~~~~~~~~~---~~~~~~~~y~a 182 (271)
T 3dtc_A 156 KITDFGLAREWHRTTK---MSAAGAYAWMA 182 (271)
T ss_dssp EECCCCC----------------CCGGGSC
T ss_pred EEccCCcccccccccc---cCCCCccceeC
Confidence 9999999987643322 12456666654
No 218
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.92 E-value=8.8e-26 Score=238.19 Aligned_cols=170 Identities=19% Similarity=0.344 Sum_probs=137.9
Q ss_pred HHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcC-----CC
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEH-----ET 581 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~-----~~ 581 (693)
...+.|...+.||+|+||.||+|+. .+|+.||||.+.......+++.+|++++.++ +||||+++++++... +.
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 3566788889999999999999997 4689999999976665677899999999999 899999999998753 35
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++||||+++|+|.+++..... ..+++.....++.+++.||+|||.. +|+||||||+||++++++.+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKG------NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGG------GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred eEEEEEEcCCCCcHHHHHHhccc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 68999999999999999975321 3589999999999999999999998 99999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++........ .....||+.|+|
T Consensus 172 Dfg~~~~~~~~~~~-~~~~~~~~~y~a 197 (326)
T 2x7f_A 172 DFGVSAQLDRTVGR-RNTFIGTPYWMA 197 (326)
T ss_dssp CCTTTC--------------CCGGGCC
T ss_pred eCcCceecCcCccc-cccccCCccccC
Confidence 99999876432211 223456666655
No 219
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.92 E-value=6e-25 Score=226.94 Aligned_cols=163 Identities=19% Similarity=0.248 Sum_probs=137.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++.+++||||+++++++.+ ++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~ 84 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLVF 84 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-CCEEEEEE
Confidence 56777889999999999999964 6899999999754433 3578899999999999999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---eEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---VRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ki~Dfg 664 (693)
||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.+.. +||+|||
T Consensus 85 e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg 153 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR--------EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG 153 (284)
T ss_dssp CCCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeece
Confidence 999999999988754 2489999999999999999999998 9999999999999986655 9999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .....||+.|+|
T Consensus 154 ~~~~~~~~~~--~~~~~~~~~y~a 175 (284)
T 3kk8_A 154 LAIEVNDSEA--WHGFAGTPGYLS 175 (284)
T ss_dssp TCEECCSSCB--CCCSCSCGGGCC
T ss_pred eeEEcccCcc--ccCCCCCcCCcC
Confidence 9988754333 233557777765
No 220
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.92 E-value=4.1e-25 Score=228.68 Aligned_cols=162 Identities=24% Similarity=0.452 Sum_probs=133.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--------KESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
++|...+.||+|+||.||+|+. .+++.||||++...... .++|.+|++++.+++||||+++++++.+ .
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~ 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN---P 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---T
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---C
Confidence 4577788999999999999997 47899999998643322 1679999999999999999999998753 3
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc-----
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE----- 657 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~----- 657 (693)
.++||||+++|+|.+++.... ..++|..+..++.+++.||+|||+. .++|+||||||+||+++.++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~ 167 (287)
T 4f0f_A 96 PRMVMEFVPCGDLYHRLLDKA-------HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVC 167 (287)
T ss_dssp TEEEEECCTTCBHHHHHHCTT-------SCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred CeEEEEecCCCCHHHHHhccc-------CCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCcee
Confidence 479999999999999887532 3599999999999999999999987 223999999999999988776
Q ss_pred eEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 658 VRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 658 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+||+|||+++..... .....||+.|+|
T Consensus 168 ~kl~Dfg~~~~~~~~----~~~~~g~~~y~a 194 (287)
T 4f0f_A 168 AKVADFGLSQQSVHS----VSGLLGNFQWMA 194 (287)
T ss_dssp EEECCCTTCBCCSSC----EECCCCCCTTSC
T ss_pred EEeCCCCcccccccc----ccccCCCccccC
Confidence 999999999865332 223456666654
No 221
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.92 E-value=6.6e-25 Score=232.99 Aligned_cols=167 Identities=22% Similarity=0.361 Sum_probs=136.9
Q ss_pred HhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhc--CCCCCccceeEEEEcCC---CeeE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSR--VSHARLVPLLGQCLEHE---TEKL 584 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~--l~H~niv~l~g~~~~~~---~~~~ 584 (693)
..++|...+.||+|+||.||+|+. +|+.||||++... ..+++.+|++++.. ++||||+++++++...+ ...+
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~ 116 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence 445688899999999999999998 4899999998643 34678889999887 79999999999987643 2689
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~k 659 (693)
+||||+++|+|.+++++ ..++|.++.+++.+++.||+|||... ..+|+||||||+||++++++++|
T Consensus 117 lv~e~~~~g~L~~~l~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 117 LVSDYHEHGSLFDYLNR---------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp EEECCCTTCBHHHHHHH---------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred EEEeecCCCcHHHHHhc---------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence 99999999999999975 24899999999999999999999311 22899999999999999999999
Q ss_pred ECCcccccccCCCCcc---eeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
|+|||+++........ ......||+.|+|
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~a 219 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCC
T ss_pred EEECCCceeccccccccccccccCCcCcccCC
Confidence 9999999887433221 1233456777764
No 222
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=3.5e-25 Score=232.03 Aligned_cols=166 Identities=19% Similarity=0.186 Sum_probs=132.9
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.++|...+.||+|+||.||+|+.. +++.||||.+...... .+.|.+|++++.+++||||+++++++.+ ++..++
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~l 111 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-DGQLYV 111 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-CCeEEE
Confidence 356888899999999999999974 6899999999754322 3678999999999999999999999876 468899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... .+++.++..++.++++||+|||.. +|+||||||+||+++.++.+||+|||+
T Consensus 112 v~e~~~~~~L~~~l~~~~--------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~ 180 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG--------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGI 180 (309)
T ss_dssp EEECCCCEEHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC
T ss_pred EEEecCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCcc
Confidence 999999999999997532 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++..............+++.|+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~y~a 203 (309)
T 2h34_A 181 ASATTDEKLTQLGNTVGTLYYMA 203 (309)
T ss_dssp ----------------CCGGGCC
T ss_pred CccccccccccccccCCCcCccC
Confidence 98875443333344567777765
No 223
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=2.8e-25 Score=230.99 Aligned_cols=146 Identities=23% Similarity=0.389 Sum_probs=126.4
Q ss_pred CCccCccccCCeeeEEEEEeC-C---CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-G---GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~---g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|...++||+|+||.||+|+.. + +..||||++..... ..+.|.+|++++++++|||||+++++|.+.+...++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 344578999999999999853 2 33799999875332 24679999999999999999999999976544558999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+.+|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 103 e~~~~~~L~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 172 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQ-------RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLAR 172 (298)
T ss_dssp CCCTTCBHHHHHHCTT-------CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSC
T ss_pred ecccCCCHHHHHhccc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcc
Confidence 9999999999997532 3589999999999999999999998 99999999999999999999999999998
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
..
T Consensus 173 ~~ 174 (298)
T 3pls_A 173 DI 174 (298)
T ss_dssp TT
T ss_pred cc
Confidence 76
No 224
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.92 E-value=2.1e-25 Score=231.41 Aligned_cols=163 Identities=20% Similarity=0.385 Sum_probs=126.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+..+ .||||++...... .+.|.+|++++.+++||||+++++++. ....++|||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~lv~e 99 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--APQLAIVTQ 99 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEEE
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc--CCccEEEEE
Confidence 457778899999999999998753 5999999754433 467999999999999999999999764 356899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 100 WCEGSSLYHHLHASE-------TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169 (289)
T ss_dssp CCCEEEHHHHHTTC----------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred ecCCCcHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccc
Confidence 999999999996432 3589999999999999999999998 999999999999999999999999999987
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... .........||+.|+|
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~a 190 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMA 190 (289)
T ss_dssp --------------CCCTTCC
T ss_pred cccccccccccccCCCccccC
Confidence 6321 1222333556777765
No 225
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.92 E-value=2.7e-25 Score=229.11 Aligned_cols=163 Identities=18% Similarity=0.261 Sum_probs=134.2
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.++|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++++++||||++++++|.+ +...++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-CCEEEE
Confidence 345778889999999999999864 57899999985432 224678999999999999999999999875 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... .+++..+..++.+++.||+|||.. +|+||||||+||+++.++.+||+|||+
T Consensus 87 v~e~~~~~~l~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~ 155 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS--------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGW 155 (279)
T ss_dssp EECCCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCE
T ss_pred EEecCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccc
Confidence 999999999999997542 489999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+++.|+|
T Consensus 156 ~~~~~~~~---~~~~~~~~~y~a 175 (279)
T 3fdn_A 156 SVHAPSSR---RTDLCGTLDYLP 175 (279)
T ss_dssp ESCC-----------CCCCTTCC
T ss_pred cccCCccc---ccccCCCCCccC
Confidence 87653322 123455666654
No 226
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.92 E-value=2.2e-25 Score=237.20 Aligned_cols=162 Identities=18% Similarity=0.194 Sum_probs=131.8
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCC--CCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSH--ARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...+.||+|+||.||+|...+++.||||++...... .+.|.+|++++.+++| +|||++++++.+ +...++||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~ 88 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVM 88 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-CCEEEEEE
Confidence 46778899999999999999888999999998754333 3678999999999987 999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
| +.+|+|.+++... ..+++.++..|+.+++.||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 89 e-~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~ 155 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKK--------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 155 (343)
T ss_dssp C-CCSEEHHHHHHHS--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred e-CCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccc
Confidence 9 5688999999763 3489999999999999999999998 999999999999997 6789999999999
Q ss_pred ccCCCCcc-eeeeeehhhhhhh
Q 035786 668 AQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~-~~~~~~~~~~y~a 688 (693)
........ ..+..+||++|+|
T Consensus 156 ~~~~~~~~~~~~~~~gt~~y~a 177 (343)
T 3dbq_A 156 QMQPDTTSVVKDSQVGTVNYMP 177 (343)
T ss_dssp CC------------CCCCSSCC
T ss_pred ccCcccccccCCCCcCCcCcCC
Confidence 87433221 2334556666665
No 227
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.92 E-value=2.2e-25 Score=229.94 Aligned_cols=163 Identities=24% Similarity=0.372 Sum_probs=135.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEc------------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLE------------ 578 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~------------ 578 (693)
.+|...+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++.+++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 34778899999999999999975 79999999996543 457889999999999999999998743
Q ss_pred ---CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 579 ---HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 579 ---~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
.....++||||+++|+|.++++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRG------EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 12346899999999999999975321 3589999999999999999999998 99999999999999999
Q ss_pred CceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 656 FEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 656 ~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.+||+|||+++....... .....+++.|+|
T Consensus 159 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~a 189 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMS 189 (284)
T ss_dssp TEEEECCCTTCEESSCCSC--CCCCCSCCTTSC
T ss_pred CCEEECcchhheecccccc--ccccCCcccccC
Confidence 9999999999988744322 223345666654
No 228
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.92 E-value=1.5e-25 Score=240.48 Aligned_cols=167 Identities=16% Similarity=0.155 Sum_probs=133.3
Q ss_pred hCCCCccCccccCCeeeEEEEEeCC------CcEEEEEEecccccC------------HHHHHHHHHHHhcCCCCCccce
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFK------------KESYMMELDLFSRVSHARLVPL 572 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~~------------~~~f~~Ei~~l~~l~H~niv~l 572 (693)
.++|...+.||+|+||.||+|...+ ++.||||.+...... .+.+..|+..+..++|||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4467888999999999999998754 478999998654311 1235567778888999999999
Q ss_pred eEEEEcCC---CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCC
Q 035786 573 LGQCLEHE---TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASS 649 (693)
Q Consensus 573 ~g~~~~~~---~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~N 649 (693)
+++|.... ...++||||+ +|+|.+++.... ..++|.++..|+.|++.||+|||+. +|+||||||+|
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-------~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~N 182 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-------KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASN 182 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHH
Confidence 99987531 2478999999 999999997532 3599999999999999999999998 99999999999
Q ss_pred eeeC--CCCceEECCcccccccCCCCcc------eeeeeehhhhhhh
Q 035786 650 ILLD--DKFEVRLGSLSELHAQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 650 ILld--~~~~~ki~Dfgla~~~~~~~~~------~~~~~~~~~~y~a 688 (693)
||++ .++.+||+|||+++.+...... ......||+.|+|
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 229 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTS 229 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCC
T ss_pred EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccC
Confidence 9999 8899999999999887332111 1233558888876
No 229
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.92 E-value=4.4e-25 Score=226.82 Aligned_cols=165 Identities=17% Similarity=0.255 Sum_probs=137.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+...... .+.+.+|++++.+++||||+++++++.+ ++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 85 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLE 85 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-CCEEEEEEE
Confidence 34777889999999999999975 6899999998654322 5679999999999999999999999876 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 86 ~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 154 (276)
T 2yex_A 86 YCSGGELFDRIEPD--------IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (276)
T ss_dssp CCTTEEGGGGSBTT--------TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred ecCCCcHHHHHhhc--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccc
Confidence 99999999998642 3489999999999999999999998 999999999999999999999999999987
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... .........|++.|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~a 175 (276)
T 2yex_A 155 FRYNNRERLLNKMCGTLPYVA 175 (276)
T ss_dssp CEETTEECCBCCCCSCGGGCC
T ss_pred cCCCcchhcccCCccccCccC
Confidence 6321 1111233456666654
No 230
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.92 E-value=1.5e-25 Score=236.47 Aligned_cols=163 Identities=19% Similarity=0.334 Sum_probs=130.0
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||+|+||.||+|+.. +++.||||++...... ...+.+|++++.+++|||||++++++.+ ++..++||||
T Consensus 3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 81 (324)
T 3mtl_A 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFEY 81 (324)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-SSCEEEEEEC
T ss_pred ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-CCEEEEEecc
Confidence 4667789999999999999975 6899999998654322 2356689999999999999999999875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++ |+|.+++.... ..+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~~-~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 150 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-------NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAK 150 (324)
T ss_dssp CS-EEHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred cc-cCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence 98 69999987543 3589999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .....+|++|+|
T Consensus 151 ~~~~~~-~~~~~~t~~y~a 168 (324)
T 3mtl_A 151 SIPTKT-YDNEVVTLWYRP 168 (324)
T ss_dssp -------------CGGGCC
T ss_pred cCCccc-cccccCcccccC
Confidence 433222 333566777765
No 231
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.92 E-value=5.5e-25 Score=227.14 Aligned_cols=162 Identities=17% Similarity=0.260 Sum_probs=134.6
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
+|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.|.+|++++.+++||||+++++++.+ +...+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVV 84 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-CCeEE
Confidence 4677889999999999999975 689999999865321 25689999999999999999999999875 46789
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----ceEE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF----EVRL 660 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~----~~ki 660 (693)
+||||+++|+|.+++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++ .+||
T Consensus 85 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl 153 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK--------ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKL 153 (283)
T ss_dssp EEEECCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEE
T ss_pred EEEeecCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEE
Confidence 999999999999999753 2489999999999999999999998 999999999999999877 8999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++....... .....+++.|+|
T Consensus 154 ~dfg~~~~~~~~~~--~~~~~~~~~y~a 179 (283)
T 3bhy_A 154 IDFGIAHKIEAGNE--FKNIFGTPEFVA 179 (283)
T ss_dssp CCCTTCEECC----------CCCGGGCC
T ss_pred EecccceeccCCCc--ccccCCCcCccC
Confidence 99999988744322 233456666654
No 232
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.92 E-value=3.6e-25 Score=235.74 Aligned_cols=169 Identities=16% Similarity=0.206 Sum_probs=138.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC------------------HHHHHHHHHHHhcCCCCCcccee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK------------------KESYMMELDLFSRVSHARLVPLL 573 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~------------------~~~f~~Ei~~l~~l~H~niv~l~ 573 (693)
++|...+.||+|+||.||+|+. +|+.||||++...... .+.|.+|++++.+++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4577888999999999999999 8999999998643211 17899999999999999999999
Q ss_pred EEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-CCCCCeEecCCCCCCeee
Q 035786 574 GQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH-ECNPPLVHRDVQASSILL 652 (693)
Q Consensus 574 g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~~NILl 652 (693)
+++.+ ++..++||||+++|+|.+++.............+++..+..++.+++.||+|||+ . +|+||||||+||++
T Consensus 110 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 110 GIITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp EEEES-SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEee-CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 99876 4688999999999999999432111111112569999999999999999999998 6 89999999999999
Q ss_pred CCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 653 DDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.++.+||+|||+++..... ......+++.|+|
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~a 218 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMP 218 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCC
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccC
Confidence 99999999999999886433 1233456666654
No 233
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.92 E-value=5.7e-25 Score=228.53 Aligned_cols=164 Identities=17% Similarity=0.221 Sum_probs=136.4
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +++.||+|.+..... ..+.+.+|++++++++||||+++++++.+ ++..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 93 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVV 93 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-CCEEEEE
Confidence 34677889999999999999975 588999999865422 24678999999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.++..++.++++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 94 ~e~~~~~~L~~~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 162 (294)
T 2rku_A 94 LELCRRRSLLELHKRR--------KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162 (294)
T ss_dssp EECCTTCBHHHHHHHH--------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCc
Confidence 9999999999998753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .....||+.|+|
T Consensus 163 ~~~~~~~~~-~~~~~~~~~y~a 183 (294)
T 2rku_A 163 TKVEYDGER-KKVLCGTPNYIA 183 (294)
T ss_dssp EECCSTTCC-BCCCCSCCSSCC
T ss_pred eecccCccc-cccccCCCCcCC
Confidence 886422211 222445555543
No 234
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.92 E-value=2.5e-25 Score=229.67 Aligned_cols=165 Identities=21% Similarity=0.320 Sum_probs=132.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCC----CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|+..+ +..||||.+..... ..+.|.+|++++++++||||+++++++.+ +..++
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~ 89 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE--EPTWI 89 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS--SSCEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCEE
Confidence 457778899999999999998643 34699999875432 25679999999999999999999998753 46799
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 90 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 159 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK-------NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGL 159 (281)
T ss_dssp EEECCTTCBHHHHHHHHT-------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred EEecCCCCCHHHHHHhcc-------ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCC
Confidence 999999999999997543 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++..............+++.|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~y~a 182 (281)
T 3cc6_A 160 SRYIEDEDYYKASVTRLPIKWMS 182 (281)
T ss_dssp GGCC---------CCCCCGGGCC
T ss_pred CcccccccccccccCCCCcceeC
Confidence 99874433222223334445543
No 235
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=4.8e-24 Score=221.29 Aligned_cols=199 Identities=28% Similarity=0.300 Sum_probs=96.2
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|+.+++++|.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..+ . ..+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEE
T ss_pred cCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEE
Confidence 444455555555444 2333332 344555555555554444455555555555555555543211 1 3444455555
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.++ .+|..+..+++|++|++++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 161 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT- 161 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-
Confidence 5555544 34444455555555555555555444445555555555555555555444444444444444444444444
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l 323 (693)
.+|...|..+++|+.|+|++|+++ .+|..+...++|+.|+|++|.+
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 233344444555555555555554 3344444444444444444444
No 236
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.92 E-value=5.6e-25 Score=233.29 Aligned_cols=164 Identities=17% Similarity=0.221 Sum_probs=137.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.+|...+.||+|+||.||+++.. +++.||+|.+..... ..+.|.+|++++.+++||||+++++++.+ ++..++|
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 119 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVV 119 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEE
Confidence 45777889999999999999975 588999999865422 24678999999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 120 ~e~~~~~~L~~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 188 (335)
T 2owb_A 120 LELCRRRSLLELHKRR--------KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188 (335)
T ss_dssp ECCCTTCBHHHHHHHH--------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCc
Confidence 9999999999998753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .....||+.|+|
T Consensus 189 ~~~~~~~~~-~~~~~gt~~y~a 209 (335)
T 2owb_A 189 TKVEYDGER-KKVLCGTPNYIA 209 (335)
T ss_dssp EECCSTTCC-BCCCCSCCSSCC
T ss_pred eecccCccc-ccccCCCccccC
Confidence 886422211 223445555554
No 237
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.92 E-value=6.5e-25 Score=246.01 Aligned_cols=164 Identities=18% Similarity=0.287 Sum_probs=137.0
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc--------------cCHHHHHHHHHHHhcCCCCCccceeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS--------------FKKESYMMELDLFSRVSHARLVPLLGQ 575 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~--------------~~~~~f~~Ei~~l~~l~H~niv~l~g~ 575 (693)
.+.|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++.+++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 456888899999999999999974 58899999986532 124678999999999999999999999
Q ss_pred EEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 576 CLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 576 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
|.+ +...++||||+++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++.+
T Consensus 115 ~~~-~~~~~lv~e~~~gg~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 182 (504)
T 3q5i_A 115 FED-KKYFYLVTEFYEGGELFEQIINR--------HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENK 182 (504)
T ss_dssp EEC-SSEEEEEEECCTTCBHHHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESST
T ss_pred EEc-CCEEEEEEecCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecC
Confidence 875 46889999999999999999754 2489999999999999999999998 99999999999999977
Q ss_pred C---ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 656 F---EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 656 ~---~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+ .+||+|||+++....... ....+||++|+|
T Consensus 183 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~a 216 (504)
T 3q5i_A 183 NSLLNIKIVDFGLSSFFSKDYK--LRDRLGTAYYIA 216 (504)
T ss_dssp TCCSSEEECCCTTCEECCTTSC--BCCCCSCTTTCC
T ss_pred CCCccEEEEECCCCEEcCCCCc--cccccCCcCCCC
Confidence 5 699999999998754332 344568888875
No 238
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.92 E-value=4.3e-25 Score=239.17 Aligned_cols=162 Identities=18% Similarity=0.181 Sum_probs=133.7
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCC--CCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVS--HARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...+.||+|+||.||+|...+++.||||++...... .+.|.+|++++.+++ |||||++++++.. ++..++||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~ 135 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVM 135 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-CCEEEEEE
Confidence 37778899999999999999888999999999654332 467999999999996 5999999999876 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
| +.+|+|.+++.... .+++.++..|+.+|+.||+|||.. +|+||||||+|||++ ++.+||+|||+++
T Consensus 136 E-~~~~~L~~~l~~~~--------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~ 202 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 202 (390)
T ss_dssp E-CCSEEHHHHHHHCS--------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred e-cCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccc
Confidence 9 56889999997532 488999999999999999999998 999999999999996 5899999999999
Q ss_pred ccCCCCc-ceeeeeehhhhhhh
Q 035786 668 AQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~-~~~~~~~~~~~y~a 688 (693)
....... ......+||++|+|
T Consensus 203 ~~~~~~~~~~~~~~~gt~~y~a 224 (390)
T 2zmd_A 203 QMQPDTTSVVKDSQVGAVNYMP 224 (390)
T ss_dssp CC---------CCSCCCGGGCC
T ss_pred cccCCCccccCCCCCcCCCccC
Confidence 8743322 12344568888876
No 239
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.92 E-value=5.5e-25 Score=234.80 Aligned_cols=166 Identities=23% Similarity=0.359 Sum_probs=136.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-------C
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-------E 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-------~ 580 (693)
++|...+.||+|+||.||+|+. .+|+.||||++...... ...+.+|++++.+++|||||+++++|... +
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 4577788999999999999997 57899999998653322 45788999999999999999999998753 2
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
+..++||||+++ +|.+.+.... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl 165 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL-------VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKL 165 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred ceEEEEEeccCC-CHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEE
Confidence 357899999984 7887776432 3489999999999999999999998 9999999999999999999999
Q ss_pred CCcccccccCC---CCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGD---SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~---~~~~~~~~~~~~~~y~a 688 (693)
+|||+++.+.. ......+...||++|+|
T Consensus 166 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 196 (351)
T 3mi9_A 166 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 196 (351)
T ss_dssp CCCTTCEECCCCSSSSCCCCCSSCSCGGGCC
T ss_pred ccchhcccccccccccccccCCcccccCccC
Confidence 99999988632 12222344567888876
No 240
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=4.8e-25 Score=233.62 Aligned_cols=146 Identities=21% Similarity=0.375 Sum_probs=123.5
Q ss_pred CCccCccccCCeeeEEEEEeCC-----CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG-----GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
|...+.||+|+||.||+|+... +..||||++..... ..++|.+|++++.+++|||||++++++.+ .+..++|
T Consensus 46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 124 (333)
T 1mqb_A 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-YKPMMII 124 (333)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEE
T ss_pred hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-CCCcEEE
Confidence 4446889999999999998642 24699999975432 24579999999999999999999999865 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++... ..+++.++..++.++++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 125 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 125 TEYMENGALDKFLREKD-------GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp EECCTTEEHHHHHHHTT-------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred EeCCCCCcHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcc
Confidence 99999999999997532 3589999999999999999999998 8999999999999999999999999999
Q ss_pred cccC
Q 035786 667 HAQG 670 (693)
Q Consensus 667 ~~~~ 670 (693)
+...
T Consensus 195 ~~~~ 198 (333)
T 1mqb_A 195 RVLE 198 (333)
T ss_dssp ----
T ss_pred hhhc
Confidence 9874
No 241
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.92 E-value=2e-25 Score=233.70 Aligned_cols=162 Identities=22% Similarity=0.365 Sum_probs=127.2
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++++++|||||+++++|. +..++||||+++
T Consensus 9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---~~~~lv~e~~~~ 83 (307)
T 2eva_A 9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEG 83 (307)
T ss_dssp GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT---TTTEEEEECCTT
T ss_pred HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc---CCcEEEEEcCCC
Confidence 4667789999999999999985 788999998643 23567999999999999999999999875 347999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc-eEECCcccccccCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE-VRLGSLSELHAQGD 671 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~-~ki~Dfgla~~~~~ 671 (693)
|+|.++++.... ...+++..+..++.++++||+|||+....+|+||||||+||++++++. +||+|||+++....
T Consensus 84 ~~L~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 84 GSLYNVLHGAEP-----LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CBHHHHHHCSSS-----EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCHHHHHhccCC-----CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 999999975432 134789999999999999999999843338999999999999998876 79999999987633
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.. +...||+.|+|
T Consensus 159 ~~----~~~~gt~~y~a 171 (307)
T 2eva_A 159 HM----TNNKGSAAWMA 171 (307)
T ss_dssp ----------CCTTSSC
T ss_pred cc----ccCCCCCceEC
Confidence 22 22345666654
No 242
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.92 E-value=1.1e-24 Score=226.07 Aligned_cols=165 Identities=18% Similarity=0.247 Sum_probs=134.5
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+....+||+|+||.||+|+. .+++.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..++||||++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~ 102 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-NGFIKIFMEQVP 102 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCS
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-CCcEEEEEEeCC
Confidence 55667999999999999996 56889999999764433 5679999999999999999999999876 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-CCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-KFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-~~~~ki~Dfgla~~~~ 670 (693)
+|+|.++++.... ...+++..+..++.+++.||+|||.. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 103 ~~~L~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 103 GGSLSALLRSKWG-----PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EEEHHHHHHHTTC-----CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred CCCHHHHHHhhcc-----CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 9999999976422 13478999999999999999999998 9999999999999997 8999999999998864
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
..... .....|++.|+|
T Consensus 175 ~~~~~-~~~~~~~~~y~a 191 (295)
T 2clq_A 175 GINPC-TETFTGTLQYMA 191 (295)
T ss_dssp C------CCCCCCGGGCC
T ss_pred CCCCc-ccccCCCccccC
Confidence 32211 223445666654
No 243
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.92 E-value=1.9e-25 Score=237.56 Aligned_cols=176 Identities=16% Similarity=0.139 Sum_probs=135.8
Q ss_pred HHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc------cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS------FKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~------~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
...++|...+.||+|+||.||+|+. .+++.||||++.... ...+.|.+|++++.+++|||||+++++|.+ ++
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~ 101 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED-EQ 101 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SS
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-CC
Confidence 3455688899999999999999997 468899999986432 224679999999999999999999999875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC--------------------------------CCCCCCCCHHHHHHHHHHHHHHH
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE--------------------------------DDSLQSLDWITRLKIAIGAAEGL 629 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~--------------------------------~~~~~~l~~~~r~~ia~~ia~gl 629 (693)
..++||||+++|+|.+++....... ......+++.....|+.+++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 7899999999999999996311000 00011245677888999999999
Q ss_pred hhhccCCCCCeEecCCCCCCeeeCCCC--ceEECCcccccccCC---CCcceeeeeehhhhhhh
Q 035786 630 SYLHHECNPPLVHRDVQASSILLDDKF--EVRLGSLSELHAQGD---SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 630 ~yLH~~~~p~iiHrDlk~~NILld~~~--~~ki~Dfgla~~~~~---~~~~~~~~~~~~~~y~a 688 (693)
+|||.. +|+||||||+||+++.+. .+||+|||+++.... ..........||+.|+|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 242 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVA 242 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCC
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccC
Confidence 999998 899999999999998776 899999999987632 22112344667777776
No 244
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.92 E-value=1.1e-24 Score=227.42 Aligned_cols=163 Identities=25% Similarity=0.376 Sum_probs=138.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+.|...+.||+|+||.||+|+. .+++.||||.+.... ...+.+.+|++++.+++||||+++++++.+ +...++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEE
Confidence 3477788999999999999986 468999999997543 235789999999999999999999999876 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 101 ~~~~~~L~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 168 (303)
T 3a7i_A 101 YLGGGSALDLLEP---------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168 (303)
T ss_dssp CCTTEEHHHHHTT---------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eCCCCcHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccccee
Confidence 9999999999864 3489999999999999999999998 999999999999999999999999999988
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .....|++.|+|
T Consensus 169 ~~~~~~~-~~~~~~~~~y~a 187 (303)
T 3a7i_A 169 LTDTQIK-RNTFVGTPFWMA 187 (303)
T ss_dssp CBTTBCC-BCCCCSCGGGCC
T ss_pred cCccccc-cCccCCCcCccC
Confidence 7443221 233456666655
No 245
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.92 E-value=5.8e-25 Score=230.57 Aligned_cols=155 Identities=23% Similarity=0.395 Sum_probs=124.0
Q ss_pred hCCCCccCccccCCeeeEEEEEeC----CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCC--
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHET-- 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-- 581 (693)
.++|...+.||+|+||.||+|+.. .+..||||++...... .+.|.+|++++.+++||||++++++|.+.+.
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 345777889999999999999863 3458999998754333 3579999999999999999999999975432
Q ss_pred --eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 582 --EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 582 --~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
..++||||+++|+|.+++..... ......+++.++..++.++++||.|||.. +|+||||||+||++++++.+|
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRL--ETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTB--TTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred CcccEEEEecccCCCHHHHHHHhhh--hcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 34899999999999999964321 11224699999999999999999999998 999999999999999999999
Q ss_pred ECCcccccccC
Q 035786 660 LGSLSELHAQG 670 (693)
Q Consensus 660 i~Dfgla~~~~ 670 (693)
|+|||+++...
T Consensus 188 l~Dfg~~~~~~ 198 (313)
T 3brb_A 188 VADFGLSKKIY 198 (313)
T ss_dssp ECSCSCC----
T ss_pred EeecCcceecc
Confidence 99999998763
No 246
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.92 E-value=3.1e-27 Score=261.62 Aligned_cols=284 Identities=20% Similarity=0.182 Sum_probs=145.5
Q ss_pred cccCCCCCEEEccCCCCCC----cCchHhhhCCCCccEEEecCCCCCcCCCccc-CCCc----cCCEEecccCcCCc---
Q 035786 89 LGNLTLLSSFNASGLSLPG----SIPEWFGYRLPALQVLDLRSCSLSGSIPGSF-GNLS----RLNVLYLSGNSLAG--- 156 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g----~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~-~~l~----~L~~L~Ls~N~l~~--- 156 (693)
+..+++|+.|++++|.+.. .+|..+. .+++|++|+|++|.+++..+..+ ..++ +|++|+|++|.++.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~ 102 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALR-VNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGC 102 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHH-TCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHH-hCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHH
Confidence 3455566666666666553 2344443 25666666666666554322222 1233 46666666666652
Q ss_pred -cCccccCCCCCCCEEEccCCCCCCcCchhhhc-----CcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCcc
Q 035786 157 -NVPATLGELKKLSNLDLSRNLLTGEIPNAISL-----LGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNAL 226 (693)
Q Consensus 157 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l 226 (693)
.+|..+..+++|++|+|++|.+++..+..+.. .++|++|++++|.+++. ++..+..+++|+.|++++|.+
T Consensus 103 ~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i 182 (461)
T 1z7x_W 103 GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDI 182 (461)
T ss_dssp HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCc
Confidence 34555666666666666666655433333222 34566666666666542 234444556666666666665
Q ss_pred cccCCcccc-----CCCCCCEEEccCCcCccc----CchhhhcCcccccccccccccccc----CCCcccCCCCCCCEEE
Q 035786 227 TGFIPSEVG-----NLDKLIELDLSKNSISGS----LPLELRGLRNLAKLVISENGLEGQ----LSEGLFPTLDQLQVVD 293 (693)
Q Consensus 227 ~g~~p~~~~-----~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L~ 293 (693)
+...+..+. ..++|++|++++|.+++. ++..+..+++|++|++++|.+++. +.+.++..+++|+.|+
T Consensus 183 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~ 262 (461)
T 1z7x_W 183 NEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLW 262 (461)
T ss_dssp HHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred chHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEE
Confidence 543332222 234566666666666543 355555566666666666655432 1122233455666666
Q ss_pred ccCCcCCCc----CcccccCCCCCCEEEccCCcCcccCCc----cCcCCCCCCcEEEccCCcccee----cCC--CCCCC
Q 035786 294 LSGNKLDGA----LPATLFLRPNLRFLDLSRNNITGSWPI----LSTNGNASGAVFNISNNMLYGD----LNS--SSFRK 359 (693)
Q Consensus 294 Ls~N~l~g~----~p~~l~~~~~L~~L~Ls~N~l~g~~p~----~~~~~~~~l~~l~ls~N~l~g~----~~~--~~~~~ 359 (693)
+++|+++.. ++..+..+++|+.|++++|++++..+. ......+.|+.|++++|.+++. ++. ..+++
T Consensus 263 L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 342 (461)
T 1z7x_W 263 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRF 342 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSS
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCC
Confidence 666666543 444555556666666666665432111 1111223555666666655543 111 12345
Q ss_pred CCEEEccCCcceee
Q 035786 360 FSLIDLSSNYFQGT 373 (693)
Q Consensus 360 l~~ldLs~N~l~g~ 373 (693)
|+.|||++|.+++.
T Consensus 343 L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 343 LLELQISNNRLEDA 356 (461)
T ss_dssp CCEEECCSSBCHHH
T ss_pred ccEEEccCCccccc
Confidence 55556665555543
No 247
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.92 E-value=6.9e-25 Score=245.17 Aligned_cols=162 Identities=15% Similarity=0.249 Sum_probs=134.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
.|...+.||+|+||.||+|+.. ++..||||++.... ...+.+.+|++++++++|||||+++++|.+ +...++|||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e 116 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-KRNYYLVME 116 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEEe
Confidence 4777889999999999999974 68899999987543 225679999999999999999999999875 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSLSE 665 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Dfgl 665 (693)
|+++|+|.+++... ..+++.....|+.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 117 ~~~~g~L~~~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~ 185 (494)
T 3lij_A 117 CYKGGELFDEIIHR--------MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGL 185 (494)
T ss_dssp CCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred cCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCC
Confidence 99999999988754 2489999999999999999999998 9999999999999976 45599999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... ....+||++|+|
T Consensus 186 a~~~~~~~~--~~~~~gt~~y~a 206 (494)
T 3lij_A 186 SAVFENQKK--MKERLGTAYYIA 206 (494)
T ss_dssp CEECBTTBC--BCCCCSCTTTCC
T ss_pred CeECCCCcc--ccccCCCcCeeC
Confidence 998754332 344678888876
No 248
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=3.9e-25 Score=235.57 Aligned_cols=166 Identities=20% Similarity=0.356 Sum_probs=132.6
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK------KESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
..++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||++++++.+ +..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~ 86 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-KSN 86 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-TTC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee-CCc
Confidence 3456888999999999999999974 6899999998643221 2468899999999999999999998865 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||+++ +|.+++.... ..+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~D 155 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS-------LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLAD 155 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC-------SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred eEEEEEcCCC-CHHHHHHhcC-------cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEe
Confidence 8999999985 8988886432 3588899999999999999999998 899999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++........ .+..++|++|+|
T Consensus 156 fg~a~~~~~~~~~-~~~~~~t~~y~a 180 (346)
T 1ua2_A 156 FGLAKSFGSPNRA-YTHQVVTRWYRA 180 (346)
T ss_dssp CGGGSTTTSCCCC-CCCSCCCCTTCC
T ss_pred cccceeccCCccc-CCcccccccccC
Confidence 9999987443221 333556777765
No 249
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.91 E-value=3.3e-25 Score=239.56 Aligned_cols=166 Identities=15% Similarity=0.215 Sum_probs=130.5
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCC--------
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE-------- 580 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-------- 580 (693)
..++|...+.||+|+||.||+|+. .+|+.||||++..... .+.+|++++++++|||||+++++|....
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 456788889999999999999986 5799999999865432 2346999999999999999999986432
Q ss_pred -----------------------------CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035786 581 -----------------------------TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631 (693)
Q Consensus 581 -----------------------------~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~y 631 (693)
...++||||++ |+|.+.++.... ....+++.....++.|+++||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR----SGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHH
Confidence 23779999999 688888764211 11459999999999999999999
Q ss_pred hccCCCCCeEecCCCCCCeeeC-CCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 632 LHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 632 LH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+. +|+||||||+|||++ +++.+||+|||+++....... .....+|++|+|
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~a 209 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRA 209 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCC
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccC
Confidence 9988 999999999999998 689999999999997633322 222345555554
No 250
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.91 E-value=1.8e-25 Score=230.25 Aligned_cols=149 Identities=24% Similarity=0.404 Sum_probs=125.0
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+.. |+.||||.+.... ..+.|.+|++++.+++||||+++++++.+.++..++||||++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 34777889999999999999875 8899999987543 456799999999999999999999998765557899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++..... ..+++..+.+++.+++.||+|||.. +|+||||||+||++++++.+||+|||+++....
T Consensus 99 ~~~L~~~l~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 99 KGSLVDYLRSRGR------SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp TEEHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred CCCHHHHHHhccc------ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 9999999975321 2388999999999999999999998 999999999999999999999999999987643
No 251
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.91 E-value=1.2e-24 Score=225.67 Aligned_cols=163 Identities=18% Similarity=0.297 Sum_probs=133.3
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC---CCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH---ETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---~~~~~lv 586 (693)
|...+.||+|+||.||+|.. .++..||+|++...... .+.|.+|++++.+++|||||++++++... +...++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 44566899999999999987 45889999998754332 46799999999999999999999987642 2357899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCceEECCccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSE 665 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgl 665 (693)
|||+++|+|.+++... ..+++..+..++.+++.||+|||+. .++|+||||||+||+++ +++.+||+|||+
T Consensus 108 ~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF--------KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EECCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEecCCCCHHHHHHHc--------cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999753 2489999999999999999999987 23499999999999998 789999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... ....||+.|+|
T Consensus 179 ~~~~~~~~~---~~~~~t~~y~a 198 (290)
T 1t4h_A 179 ATLKRASFA---KAVIGTPEFMA 198 (290)
T ss_dssp GGGCCTTSB---EESCSSCCCCC
T ss_pred ccccccccc---ccccCCcCcCC
Confidence 987643322 23445666654
No 252
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.91 E-value=6.4e-25 Score=231.86 Aligned_cols=149 Identities=21% Similarity=0.393 Sum_probs=129.4
Q ss_pred CCCccCccccCCeeeEEEEEe-----CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~l 585 (693)
+|...+.||+|+||.||+|++ .+|+.||||++...... .+.|.+|++++.+++||||++++++|...+ ...++
T Consensus 42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 121 (326)
T 2w1i_A 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121 (326)
T ss_dssp GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEE
T ss_pred HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEE
Confidence 466678999999999999984 35889999999764333 467999999999999999999999987532 35789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... ..+++.++.+++.++++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 122 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 122 IMEYLPYGSLRDYLQKHK-------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp EECCCTTCBHHHHHHHST-------TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred EEECCCCCCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 999999999999997642 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCC
Q 035786 666 LHAQGD 671 (693)
Q Consensus 666 a~~~~~ 671 (693)
++....
T Consensus 192 ~~~~~~ 197 (326)
T 2w1i_A 192 TKVLPQ 197 (326)
T ss_dssp CEECCS
T ss_pred hhhccc
Confidence 998743
No 253
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.91 E-value=5.2e-25 Score=232.78 Aligned_cols=165 Identities=20% Similarity=0.319 Sum_probs=128.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCc----EEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGT----TVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~----~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
++|...+.||+|+||.||+|+.. +++ .||+|.+.... ...++|.+|++++.+++|||||+++++|.. ...+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES--SSEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec--CCce
Confidence 45777889999999999999963 454 36788775432 236789999999999999999999999975 3588
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+|+||+++|+|.+++.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 93 ~v~~~~~~g~L~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG 162 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 162 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTT
T ss_pred EEEEecCCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCc
Confidence 9999999999999997643 3489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCc-ceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
+++....... .......+|+.|+|
T Consensus 163 ~a~~~~~~~~~~~~~~~~~t~~y~a 187 (327)
T 3lzb_A 163 LAKLLGAEEKEYHAEGGKVPIKWMA 187 (327)
T ss_dssp C----------------CCCGGGSC
T ss_pred ceeEccCccccccccCCCccccccC
Confidence 9998733222 11222344555554
No 254
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.91 E-value=7.3e-25 Score=235.16 Aligned_cols=164 Identities=19% Similarity=0.308 Sum_probs=137.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCC----CeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHE----TEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~~ 584 (693)
.+|...+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++.+++|||||++++++.... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 4577889999999999999986 46889999999753322 467999999999999999999999986432 3579
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+|+||++ |+|.+++.. ..+++.++..|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 107 iv~e~~~-~~L~~~l~~---------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKT---------QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp EEEECCS-EEHHHHHHH---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEcccC-cCHHHHHHh---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCc
Confidence 9999998 699999864 2489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCc--ceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~--~~~~~~~~~~~y~a 688 (693)
+++....... ...+..+||++|+|
T Consensus 174 ~a~~~~~~~~~~~~~~~~~gt~~y~a 199 (364)
T 3qyz_A 174 LARVADPDHDHTGFLTEYVATRWYRA 199 (364)
T ss_dssp TCEECCGGGCBCCTTCCCCSCGGGCC
T ss_pred ceEecCCCCCccccccccccccCCCC
Confidence 9998743322 12344678888876
No 255
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.91 E-value=3e-25 Score=234.72 Aligned_cols=165 Identities=16% Similarity=0.322 Sum_probs=128.8
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
..++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++.+++|||||++++++.+ +...++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l 110 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-NHRLHL 110 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-TTEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-CCEEEE
Confidence 345688889999999999999985 47899999999654322 4568899999999999999999999876 468899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee-----CCCCceEE
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL-----DDKFEVRL 660 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl-----d~~~~~ki 660 (693)
||||++ |+|.+++.... .+++..+..|+.+++.||+|||+. +|+||||||+|||+ ++++.+||
T Consensus 111 v~e~~~-~~L~~~~~~~~--------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl 178 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP--------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKI 178 (329)
T ss_dssp EEECCS-EEHHHHHHHCT--------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEE
T ss_pred EEecCC-CCHHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEE
Confidence 999998 59999997542 489999999999999999999998 99999999999999 45566999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++........ .+..++|++|+|
T Consensus 179 ~Dfg~a~~~~~~~~~-~~~~~~t~~y~a 205 (329)
T 3gbz_A 179 GDFGLARAFGIPIRQ-FTHEIITLWYRP 205 (329)
T ss_dssp CCTTHHHHHC------------CCTTCC
T ss_pred CcCCCccccCCcccc-cCCCcCCccccC
Confidence 999999886433221 233455666654
No 256
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.91 E-value=7.2e-25 Score=225.39 Aligned_cols=163 Identities=17% Similarity=0.264 Sum_probs=132.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+.... ...+.+.+|++++.+++||||+++++++.+ +...++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-PTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCeEEEE
Confidence 35777889999999999999975 78999999986432 225679999999999999999999999875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 158 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLS 158 (276)
T ss_dssp EECCCSCBHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGG
T ss_pred EeccCCCcHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccc
Confidence 99999999999997542 489999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+++.|+|
T Consensus 159 ~~~~~~~~--~~~~~~~~~y~a 178 (276)
T 2h6d_A 159 NMMSDGEF--LRTSCGSPNYAA 178 (276)
T ss_dssp GCCCC---------------CC
T ss_pred cccCCCcc--eecccCCccccC
Confidence 88643321 222345666654
No 257
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=9.4e-25 Score=226.12 Aligned_cols=141 Identities=21% Similarity=0.315 Sum_probs=125.0
Q ss_pred CccccCCeeeEEEEEeC---CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 518 NLIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
..||+|+||.||+|+.. ++..||||.+..... ..+++.+|++++.+++||||+++++++. .+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--CCCcEEEEEeCCC
Confidence 38999999999999863 578899999976432 2567999999999999999999999984 3568999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 94 ~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 94 GPLHKFLVGKR-------EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEHHHHHTTCT-------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred CCHHHHHHhCC-------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999996432 3589999999999999999999998 99999999999999999999999999999874
No 258
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.91 E-value=7.3e-25 Score=244.43 Aligned_cols=162 Identities=19% Similarity=0.310 Sum_probs=139.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||+++++|.+ +...++||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 105 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-KGYFYLVG 105 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEE
Confidence 4777889999999999999975 78999999986532 235789999999999999999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfg 664 (693)
||+++|+|.+++... ..+++.....|+.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 106 e~~~~~~L~~~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 174 (484)
T 3nyv_A 106 EVYTGGELFDEIISR--------KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFG 174 (484)
T ss_dssp CCCCSCBHHHHHHTC--------SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred ecCCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence 999999999999753 3489999999999999999999998 99999999999999 467899999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||++|+|
T Consensus 175 ~a~~~~~~~~--~~~~~gt~~y~a 196 (484)
T 3nyv_A 175 LSTHFEASKK--MKDKIGTAYYIA 196 (484)
T ss_dssp HHHHBCCCCS--HHHHTTGGGTCC
T ss_pred eeEEcccccc--cccCCCCccccC
Confidence 9998754432 344568888876
No 259
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.91 E-value=5.9e-25 Score=232.61 Aligned_cols=164 Identities=21% Similarity=0.305 Sum_probs=131.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||+++++|.+ +...++||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 103 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-KKRWYLVF 103 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-CCEEEEEE
Confidence 34777889999999999999975 5899999998654433 4568899999999999999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 104 e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 172 (331)
T 4aaa_A 104 EFVDHTILDDLELFP--------NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFAR 172 (331)
T ss_dssp ECCSEEHHHHHHHST--------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred ecCCcchHHHHHhhc--------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCce
Confidence 999999999887542 2489999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
........ .....+|++|+|
T Consensus 173 ~~~~~~~~-~~~~~~t~~y~a 192 (331)
T 4aaa_A 173 TLAAPGEV-YDDEVATRWYRA 192 (331)
T ss_dssp ------------CCCCCTTCC
T ss_pred eecCCccc-cCCCcCCccccC
Confidence 76432221 223445666654
No 260
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.91 E-value=2e-25 Score=232.51 Aligned_cols=156 Identities=21% Similarity=0.314 Sum_probs=118.5
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+++.+|++++.+++||||+++++++.. ++..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-KDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-SSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-cCCcEEEe
Confidence 45688889999999999999986 468999999986543 224678999999999999999999999876 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.............+++..+..++.+++.||+|||.. +|+||||||+||++++++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999999742111111224589999999999999999999998 99999999999999999999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
...
T Consensus 170 ~~~ 172 (303)
T 2vwi_A 170 FLA 172 (303)
T ss_dssp HCC
T ss_pred eec
Confidence 763
No 261
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.91 E-value=4e-25 Score=233.93 Aligned_cols=156 Identities=26% Similarity=0.398 Sum_probs=130.5
Q ss_pred hCCCCccCccccCCeeeEEEEEeCC-C-----cEEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAG-G-----TTVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~-g-----~~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
.++|...+.||+|+||.||+|+... + ..||||.+..... ..+.+.+|++++.++ +|||||+++++|.+ ++
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH-GG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-CC
Confidence 4567788999999999999999642 2 4799999975432 246799999999999 89999999999875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
..++||||+++|+|.+++....... ......+++..+..++.+++.||+|||+. +|+||||||+||+++++
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 7899999999999999997532100 00123589999999999999999999998 99999999999999999
Q ss_pred CceEECCcccccccC
Q 035786 656 FEVRLGSLSELHAQG 670 (693)
Q Consensus 656 ~~~ki~Dfgla~~~~ 670 (693)
+.+||+|||+++...
T Consensus 201 ~~~kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 201 HVAKIGDFGLARDIM 215 (333)
T ss_dssp GEEEBCCCGGGCCGG
T ss_pred CeEEECccccccccc
Confidence 999999999998763
No 262
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.91 E-value=8.3e-25 Score=244.04 Aligned_cols=163 Identities=15% Similarity=0.292 Sum_probs=137.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccc---ccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLH---SFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+.|...+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++.+++|||||++++++.+ +...++||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 100 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIVG 100 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-CCEEEEEE
Confidence 34777899999999999999974 6899999998642 2335789999999999999999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---CCCceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD---DKFEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld---~~~~~ki~Dfg 664 (693)
||+++|+|.+++.... .+++.....|+.+++.||+|||+. +|+||||||+|||++ .++.+||+|||
T Consensus 101 e~~~~~~L~~~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 169 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK--------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (486)
T ss_dssp CCCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred EcCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECC
Confidence 9999999999987542 489999999999999999999998 999999999999995 56689999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||++|+|
T Consensus 170 ~a~~~~~~~~--~~~~~gt~~y~a 191 (486)
T 3mwu_A 170 LSTCFQQNTK--MKDRIGTAYYIA 191 (486)
T ss_dssp CTTTBCCC------CCTTGGGGCC
T ss_pred cCeECCCCCc--cCCCcCCCCCCC
Confidence 9987744332 344678888886
No 263
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.91 E-value=1.5e-24 Score=225.70 Aligned_cols=164 Identities=23% Similarity=0.289 Sum_probs=137.2
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----------CHHHHHHHHHHHhcCC-CCCccceeEEEEc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----------KKESYMMELDLFSRVS-HARLVPLLGQCLE 578 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----------~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~ 578 (693)
.++|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++.+++ ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 346778899999999999999974 689999999965421 1356889999999996 9999999998875
Q ss_pred CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 579 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
+...++||||+++|+|.+++... ..+++..+..++.+++.||+|||.. +|+||||||+||++++++.+
T Consensus 96 -~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 163 (298)
T 1phk_A 96 -NTFFFLVFDLMKKGELFDYLTEK--------VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNI 163 (298)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred -CCeEEEEEeccCCCcHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcE
Confidence 46889999999999999999753 2489999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++....... .....+++.|+|
T Consensus 164 kl~dfg~~~~~~~~~~--~~~~~~~~~y~a 191 (298)
T 1phk_A 164 KLTDFGFSCQLDPGEK--LREVCGTPSYLA 191 (298)
T ss_dssp EECCCTTCEECCTTCC--BCCCCSCGGGCC
T ss_pred EEecccchhhcCCCcc--cccccCCccccC
Confidence 9999999988643222 223445555554
No 264
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.91 E-value=2.6e-25 Score=229.09 Aligned_cols=156 Identities=24% Similarity=0.340 Sum_probs=129.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEc-CCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLE-HETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.|.+|++++.+++||||+++++++.+ .+...++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 45777889999999999999974 6899999999754332 4679999999999999999999998864 24578999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC--CCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC--NPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~--~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
|||+++|+|.+++..... ....+++..+.+++.+++.||+|||... ..+|+||||||+||++++++.+||+|||
T Consensus 86 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTK----ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EECCTTEEHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EeCCCCCCHHHHHHhhcc----cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999975321 1235899999999999999999999872 1129999999999999999999999999
Q ss_pred cccccCC
Q 035786 665 ELHAQGD 671 (693)
Q Consensus 665 la~~~~~ 671 (693)
+++....
T Consensus 162 ~~~~~~~ 168 (279)
T 2w5a_A 162 LARILNH 168 (279)
T ss_dssp HHHHC--
T ss_pred hheeecc
Confidence 9988643
No 265
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.91 E-value=4e-25 Score=236.76 Aligned_cols=162 Identities=23% Similarity=0.345 Sum_probs=134.6
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..++||||
T Consensus 34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 112 (360)
T 3eqc_A 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEH 112 (360)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-CCEEEEEEEC
Confidence 4677789999999999999975 6899999998754322 4679999999999999999999999876 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.++++... .+++..+..++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~~~~~L~~~l~~~~--------~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp CTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred CCCCCHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence 99999999997642 4899999999999999999999731 6999999999999999999999999999865
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
.... .....||+.|+|
T Consensus 183 ~~~~---~~~~~gt~~y~a 198 (360)
T 3eqc_A 183 IDSM---ANSFVGTRSYMS 198 (360)
T ss_dssp HHHC-------CCCCTTCC
T ss_pred cccc---ccCCCCCCCeEC
Confidence 2211 122455666654
No 266
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.91 E-value=6.1e-25 Score=253.10 Aligned_cols=165 Identities=22% Similarity=0.299 Sum_probs=133.3
Q ss_pred CCCCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|.... +..||||++...... .+.|.+|++++++++|||||+++|+|. ++..++
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--~~~~~l 467 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWI 467 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--cCceEE
Confidence 456677889999999999998742 567999998653322 467999999999999999999999884 356899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..++|..+..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 468 v~E~~~~g~L~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRK-------FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp EEECCTTCBHHHHHHHTT-------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred EEEcCCCCcHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 999999999999997532 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++...+......+...+++.|+|
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~a 560 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMA 560 (656)
T ss_dssp CCSCCC----------CCGGGCC
T ss_pred CeecCCCcceeccCCCCCcceeC
Confidence 99875443333333445556654
No 267
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.91 E-value=2e-24 Score=224.51 Aligned_cols=164 Identities=16% Similarity=0.140 Sum_probs=137.1
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|++++.++ +|+|++++++++.+ +...++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-GLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-TTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-CceeEEEEEe
Confidence 3577788999999999999995 579999999986433 335688999999999 89999999998865 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc-----eEECCcc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE-----VRLGSLS 664 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~-----~ki~Dfg 664 (693)
+ +|+|.++++... ..+++.++..|+.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 88 L-GPSLEDLLDLCG-------RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp C-CCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred c-CCCHHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 9 999999997542 3589999999999999999999988 9999999999999988776 9999999
Q ss_pred cccccCCCCc------ceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQ------NVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~------~~~~~~~~~~~y~a 688 (693)
+++....... .......||+.|+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 186 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMS 186 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCC
T ss_pred cccccccccccccccccCccCCCCCcccCC
Confidence 9998743322 11334567777765
No 268
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.4e-23 Score=217.90 Aligned_cols=207 Identities=26% Similarity=0.232 Sum_probs=178.1
Q ss_pred ccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCC
Q 035786 137 SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI 216 (693)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 216 (693)
.++++++|+++++++|.++ .+|..+. ++|++|+|++|.+++..|..+..+++|++|+|++|.+++. |.. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcC
Confidence 4678899999999999998 5666554 6899999999999988889999999999999999999864 333 789999
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccC
Q 035786 217 QFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSG 296 (693)
Q Consensus 217 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~ 296 (693)
+.|++++|+++ .+|..+..+++|++|++++|++++..|..|.++++|++|+|++|+++ .+|...|..+++|+.|+|++
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC-ccChhhcccccCCCEEECCC
Confidence 99999999998 67888999999999999999999888888999999999999999998 46667778899999999999
Q ss_pred CcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceec
Q 035786 297 NKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDL 352 (693)
Q Consensus 297 N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~ 352 (693)
|++++..+..+..+++|+.|+|++|+|+ .+|.. ......|+.++|++|.+.+++
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~-~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKG-FFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTT-TTTTCCCSEEECCSCCBCCSG
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChh-hcccccCCeEEeCCCCccCcC
Confidence 9999777777788999999999999998 67743 344557777777777776654
No 269
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.91 E-value=5.2e-25 Score=236.51 Aligned_cols=160 Identities=21% Similarity=0.301 Sum_probs=118.3
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-----CCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-----ETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~ 582 (693)
++|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++... ...
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5677889999999999999985 56899999999653322 46788999999999999999999988642 145
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++|+||+ +|+|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|
T Consensus 109 ~~lv~e~~-~~~L~~~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~D 175 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC---------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD 175 (367)
T ss_dssp CEEEEECC-CEECC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred EEEEeccc-CCCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEee
Confidence 79999999 6899988864 2489999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++..... .+..++|++|+|
T Consensus 176 FG~a~~~~~~----~~~~~~t~~y~a 197 (367)
T 2fst_X 176 FGLARHTADE----MTGYVATRWYRA 197 (367)
T ss_dssp -------------------CCCTTCC
T ss_pred cccccccccc----CCCcCcCcCccC
Confidence 9999886432 233567777765
No 270
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.91 E-value=1.4e-24 Score=224.47 Aligned_cols=162 Identities=15% Similarity=0.227 Sum_probs=137.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +++.||||.+.... ...+.+.+|++++.+++||||+++++++.+ ++..++|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-RKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-CCEEEEE
Confidence 34777889999999999999975 58899999986432 224679999999999999999999999875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 ~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 161 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG--------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS 161 (284)
T ss_dssp ECCCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEeCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEeccccc
Confidence 99999999999997542 489999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... ....|++.|+|
T Consensus 162 ~~~~~~~~---~~~~~~~~y~a 180 (284)
T 2vgo_A 162 VHAPSLRR---RTMCGTLDYLP 180 (284)
T ss_dssp EECSSSCB---CCCCSCGGGCC
T ss_pred ccCccccc---ccccCCCCcCC
Confidence 77643221 23456666654
No 271
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.91 E-value=1.9e-24 Score=228.43 Aligned_cols=159 Identities=15% Similarity=0.239 Sum_probs=133.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcC-CCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEH-ETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~-~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+. .+++.||||++.. ...+.+.+|++++.+++ ||||+++++++.+. ....++|||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 4577788999999999999985 5789999999864 33577999999999997 99999999998753 346789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceEECCccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVRLGSLSELH 667 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~ki~Dfgla~ 667 (693)
|+++|+|.++++. +++.++..++.+++.||+|||.. +|+||||||+|||++.++ .+||+|||+++
T Consensus 114 ~~~~~~l~~~~~~-----------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 114 HVNNTDFKQLYQT-----------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp CCCCCCHHHHGGG-----------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred ccCchhHHHHHHh-----------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 9999999998852 88999999999999999999998 999999999999999776 89999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .....++++|+|
T Consensus 180 ~~~~~~~--~~~~~~~~~y~a 198 (330)
T 3nsz_A 180 FYHPGQE--YNVRVASRYFKG 198 (330)
T ss_dssp ECCTTCC--CCSCCSCGGGCC
T ss_pred EcCCCCc--cccccccccccC
Confidence 7643322 223456666654
No 272
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.91 E-value=8.1e-25 Score=231.12 Aligned_cols=153 Identities=23% Similarity=0.358 Sum_probs=126.7
Q ss_pred CCCCccCccccCCeeeEEEEEe------CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|+. .+++.||||++..... ..++|.+|++++.+++||||+++++++.+ +...
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 108 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPR 108 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSC
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC-CCCc
Confidence 4577888999999999999984 2467899999964322 24579999999999999999999999875 4578
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEE
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRL 660 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki 660 (693)
++||||+++|+|.++++..... ......+++.++..++.+++.||+|||.. +|+||||||+||+++. +..+||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPR-PSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCC-SSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred EEEEecCCCCcHHHHHHhhccc-ccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999864321 11224589999999999999999999998 9999999999999994 456999
Q ss_pred CCccccccc
Q 035786 661 GSLSELHAQ 669 (693)
Q Consensus 661 ~Dfgla~~~ 669 (693)
+|||+++..
T Consensus 185 ~Dfg~~~~~ 193 (327)
T 2yfx_A 185 GDFGMARDI 193 (327)
T ss_dssp CCCHHHHHH
T ss_pred Ccccccccc
Confidence 999999865
No 273
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.91 E-value=8.8e-25 Score=232.38 Aligned_cols=161 Identities=16% Similarity=0.185 Sum_probs=132.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+..... .+.+|++++.++ +|||||++++++.+ +...++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDD-GKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEc-CCEEEEEEeC
Confidence 35777889999999999999974 689999999975432 345688999888 79999999998875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC----CceEECCccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK----FEVRLGSLSE 665 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~----~~~ki~Dfgl 665 (693)
+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||+.++ ..+||+|||+
T Consensus 98 ~~gg~L~~~i~~~--------~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 98 MKGGELLDKILRQ--------KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp CCSCBHHHHHHTC--------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred CCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 9999999999753 2489999999999999999999998 99999999999998543 3599999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++........ ....+||+.|+|
T Consensus 167 a~~~~~~~~~-~~~~~gt~~y~a 188 (342)
T 2qr7_A 167 AKQLRAENGL-LMTPCYTANFVA 188 (342)
T ss_dssp CEECBCTTCC-BCCSSCCSSCCC
T ss_pred cccCcCCCCc-eeccCCCccccC
Confidence 9987433222 223456666665
No 274
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.91 E-value=1.2e-24 Score=234.01 Aligned_cols=161 Identities=19% Similarity=0.279 Sum_probs=126.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-----Ce
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-----TE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~ 582 (693)
++|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++...+ ..
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 4577889999999999999986 46899999999753322 457889999999999999999999986532 25
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||++ |+|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 105 ~~lv~e~~~-~~l~~~~~~----------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 170 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM----------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 170 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred eEEEEEcCC-CCHHHHHhh----------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEE
Confidence 799999998 578888752 388999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++....... .+..+||+.|+|
T Consensus 171 fg~a~~~~~~~~--~~~~~gt~~y~a 194 (371)
T 2xrw_A 171 FGLARTAGTSFM--MTPYVVTRYYRA 194 (371)
T ss_dssp CCC------------------CTTCC
T ss_pred eecccccccccc--cCCceecCCccC
Confidence 999988744322 334567777765
No 275
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.91 E-value=2.5e-24 Score=227.53 Aligned_cols=163 Identities=16% Similarity=0.229 Sum_probs=132.5
Q ss_pred CCcc-CccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSET-NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~-~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|... +.||+|+||.||+|... +|+.||||++..... ..+++.+|++++.+++ ||||+++++++.+ +...++||
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~-~~~~~lv~ 108 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN-TSEIILIL 108 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe-CCeEEEEE
Confidence 4443 78999999999999975 689999999875332 2568999999999994 6999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Dfg 664 (693)
||+++|+|.+++..... ..+++.++..++.+++.||+|||.. +|+||||||+||+++. ++.+||+|||
T Consensus 109 e~~~~~~L~~~~~~~~~------~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 109 EYAAGGEIFSLCLPELA------EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp ECCTTEEGGGGGSSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred EecCCCcHHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 99999999999864321 4589999999999999999999998 9999999999999998 7899999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||+.|+|
T Consensus 180 ~a~~~~~~~~--~~~~~gt~~y~a 201 (327)
T 3lm5_A 180 MSRKIGHACE--LREIMGTPEYLA 201 (327)
T ss_dssp GCEEC-----------CCCGGGCC
T ss_pred cccccCCccc--cccccCCcCccC
Confidence 9998744332 233567777765
No 276
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.91 E-value=1.5e-24 Score=225.15 Aligned_cols=167 Identities=17% Similarity=0.254 Sum_probs=136.5
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
..++|...+.||+|+||.||+|+. .+++.||||.+..... .+++.+|++++.+++|++++..+++|...+...++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 346688899999999999999996 5789999998754332 34588999999999999999888888766677899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSE 665 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgl 665 (693)
|+ +|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+|||+ ++++.+||+|||+
T Consensus 86 ~~-~~~L~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCS-------RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp CC-CCBHHHHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred cc-CCCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 99 999999997432 3599999999999999999999998 99999999999999 7889999999999
Q ss_pred ccccCCCCc------ceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQ------NVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~------~~~~~~~~~~~y~a 688 (693)
++....... .......||+.|+|
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 183 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYAS 183 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCC
T ss_pred ceeccCcccCccCCCCcccccCCCccccc
Confidence 998743322 11234567888876
No 277
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.91 E-value=3.1e-24 Score=224.03 Aligned_cols=168 Identities=18% Similarity=0.292 Sum_probs=136.7
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc-----cCHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCee
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS-----FKKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEK 583 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~-----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~ 583 (693)
.++|...+.||+|+||.||+|.. .+++.||||.+.... ...+.|.+|++++.+++||||+++++++... ....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 35688899999999999999997 468899999986532 2246799999999999999999999998642 3467
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++| |.+++..... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~------~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~df 153 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE------KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISAL 153 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCC-HHHHHHhCcc------cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecc
Confidence 9999999987 7777765322 3589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCC-Ccceeeeeehhhhhhh
Q 035786 664 SELHAQGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~-~~~~~~~~~~~~~y~a 688 (693)
|+++..... .........||+.|+|
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~a 179 (305)
T 2wtk_C 154 GVAEALHPFAADDTCRTSQGSPAFQP 179 (305)
T ss_dssp TTCEECCTTCSSCEECCCCSCGGGCC
T ss_pred ccccccCccccccccccCCCCCCCcC
Confidence 999886432 2222334556777765
No 278
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.91 E-value=1.4e-24 Score=232.16 Aligned_cols=174 Identities=15% Similarity=0.197 Sum_probs=128.4
Q ss_pred HHHHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC--
Q 035786 505 EQLLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET-- 581 (693)
Q Consensus 505 ~~l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-- 581 (693)
++.....++|...+.||+|+||.||+|+. .+|+.||||++.......+.+.+|++.+..++|||||+++++|...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 45566778899999999999999999997 468999999987655555667889999999999999999999865321
Q ss_pred ----eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhc--cCCCCCeEecCCCCCCeeeCC-
Q 035786 582 ----EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLH--HECNPPLVHRDVQASSILLDD- 654 (693)
Q Consensus 582 ----~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH--~~~~p~iiHrDlk~~NILld~- 654 (693)
..++||||+++ +|.+.+..... ....+++.....++.+++.||+||| .. +|+||||||+|||++.
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYR----RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHT----TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 26899999986 55544432110 1145899999999999999999999 65 9999999999999997
Q ss_pred CCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 655 KFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 655 ~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++.+||+|||+++....... .....||++|+|
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~a 199 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSEP--NVAYICSRYYRA 199 (360)
T ss_dssp TTEEEECCCTTCBCCCTTSC--CCSTTSCGGGCC
T ss_pred CCcEEEeeCCCceecCCCCC--cccccCCcceeC
Confidence 89999999999998754332 223456666765
No 279
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.91 E-value=1.1e-24 Score=226.59 Aligned_cols=148 Identities=22% Similarity=0.379 Sum_probs=127.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++||||+++++++.+ ++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-CCceEEEE
Confidence 35777889999999999999975 6899999998654322 4678999999999999999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||++ |+|.+++..... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 e~~~-~~L~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 151 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASAL------TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151 (299)
T ss_dssp ECCS-EEHHHHHHHTTT------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHH
T ss_pred Eccc-CCHHHHHHhhhc------cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhh
Confidence 9998 699999975432 3489999999999999999999998 99999999999999999999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
..+
T Consensus 152 ~~~ 154 (299)
T 2r3i_A 152 AFG 154 (299)
T ss_dssp HHC
T ss_pred hcc
Confidence 764
No 280
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.91 E-value=1.9e-25 Score=240.86 Aligned_cols=155 Identities=17% Similarity=0.213 Sum_probs=124.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHH---HHHhcCCCCCcccee-------EEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMEL---DLFSRVSHARLVPLL-------GQC 576 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei---~~l~~l~H~niv~l~-------g~~ 576 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.|.+|+ +++++++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 4566778999999999999996 569999999996432 1246799999 566677899999998 554
Q ss_pred EcCCC----------------eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCe
Q 035786 577 LEHET----------------EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPL 640 (693)
Q Consensus 577 ~~~~~----------------~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~i 640 (693)
.+.+. ..++||||+ +|+|.++++...... .....++|..+.+|+.||+.||+|||+. +|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS-STHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTT-TTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccc-cccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 43211 278999999 689999998542211 1113466899999999999999999998 99
Q ss_pred EecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 641 VHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 641 iHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+||||||+|||+++++.+||+|||+++..+.
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~ 258 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA 258 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC
Confidence 9999999999999999999999999997543
No 281
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.91 E-value=1.6e-24 Score=231.25 Aligned_cols=164 Identities=16% Similarity=0.280 Sum_probs=134.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcC----CCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEH----ETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~----~~~~~ 584 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+++.+|++++.+++||||+++++++... ....+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 46778889999999999999974 6899999999643322 45788999999999999999999987642 24679
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 91 lv~e~~~-~~L~~~~~~---------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---------QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp EEECCCS-EEHHHHHHH---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred EEEeccC-ccHHHHHhh---------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecc
Confidence 9999998 699999875 2489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCcc---------eeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQN---------VLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~---------~~~~~~~~~~y~a 688 (693)
+++........ .....+||++|+|
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 190 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCC
T ss_pred cccccccccccccCccccccchhhccccccccC
Confidence 99987432111 1223467777766
No 282
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.91 E-value=6.1e-25 Score=229.03 Aligned_cols=147 Identities=18% Similarity=0.347 Sum_probs=128.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||.||+|+.. +|+.||+|.+..... ..+.|.+|++++.+++||||+++++++.. ++..++||||
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 97 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-DGKLWIMIEF 97 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-C-CEEEEEEC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-CCeEEEEEEe
Confidence 45777889999999999999975 589999999865433 36789999999999999999999999876 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++.... ..+++.++..++.+++.||+|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 98 ~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-------RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp CTTEEHHHHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred CCCCcHHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 99999999987532 3489999999999999999999998 9999999999999999999999999997653
No 283
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.91 E-value=2.7e-24 Score=225.53 Aligned_cols=165 Identities=19% Similarity=0.340 Sum_probs=135.0
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.+.|...+.||+|+||.||+|... +|+.||||.+.... ..+++.+|++++.+++||||+++++++.+ ++..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEeec
Confidence 346778889999999999999975 58999999997543 34679999999999999999999999876 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++.... ..+++..+..++.+++.||.|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~~~~~L~~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 106 CGAGSVSDIIRLRN-------KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp CTTEEHHHHHHHHT-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 99999999997432 3589999999999999999999998 9999999999999999999999999999887
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .....|++.|+|
T Consensus 176 ~~~~~~-~~~~~~~~~y~a 193 (314)
T 3com_A 176 TDTMAK-RNTVIGTPFWMA 193 (314)
T ss_dssp BTTBSC-BCCCCSCGGGCC
T ss_pred hhhccc-cCccCCCCCccC
Confidence 443221 233456666655
No 284
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.91 E-value=6.2e-25 Score=230.70 Aligned_cols=151 Identities=21% Similarity=0.292 Sum_probs=128.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEc---CCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLE---HETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~---~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++.+++|||||+++++|.. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4577888999999999999996 5789999999865332 25679999999999999999999999863 22367899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++..... ....+++.++..++.++++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 109 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKD----KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EECCTTCBHHHHHHHHHT----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEeCCCCcHHHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999975321 124599999999999999999999998 9999999999999999999999999998
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
+..
T Consensus 182 ~~~ 184 (317)
T 2buj_A 182 NQA 184 (317)
T ss_dssp EES
T ss_pred hhc
Confidence 775
No 285
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.91 E-value=7.5e-25 Score=247.90 Aligned_cols=153 Identities=15% Similarity=0.080 Sum_probs=117.9
Q ss_pred cccCCeeeEEEEE-eCCCcEEEEEEeccccc-----------CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEE
Q 035786 520 IKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF-----------KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 520 ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~-----------~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv 586 (693)
.+.|+.|.++++. +--|+.||||.+..... ..++|.+|+++|+++ .|+||+++++|+-+ +...|||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed-~~~~yLV 320 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN-AQSGWLV 320 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-SSEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-CCEEEEE
Confidence 4556666665544 23488999999865321 135799999999999 79999999998864 5789999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||++||+|.++|.+.. .++.. +|+.||+.||+|+|++ +||||||||+||||++++.+||+|||+|
T Consensus 321 MEyv~G~~L~d~i~~~~--------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlA 386 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE--------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSI 386 (569)
T ss_dssp EECCCSEEHHHHHHTTC--------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTE
T ss_pred EecCCCCcHHHHHHhCC--------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccC
Confidence 99999999999997543 35543 5899999999999999 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .+..+||+.|||
T Consensus 387 r~~~~~~~~-~~t~vGTp~YmA 407 (569)
T 4azs_A 387 VTTPQDCSW-PTNLVQSFFVFV 407 (569)
T ss_dssp ESCC---CC-SHHHHHHHHHHH
T ss_pred eeCCCCCcc-ccCceechhhcc
Confidence 987543332 445789999997
No 286
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.91 E-value=2.6e-25 Score=237.50 Aligned_cols=163 Identities=18% Similarity=0.213 Sum_probs=133.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC---------CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccc-----------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA---------GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVP----------- 571 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~---------~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~----------- 571 (693)
++|...+.||+|+||.||+|+.. +++.||||.+... +.+.+|++++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 45777889999999999999975 3789999998643 46889999999999999988
Q ss_pred ----eeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCC
Q 035786 572 ----LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647 (693)
Q Consensus 572 ----l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~ 647 (693)
+++++...+...++||||+ +|+|.+++.... ...+++.++..|+.|++.||+|||+. +|+||||||
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP------KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG------GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC------cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 6778776557889999999 999999998542 13599999999999999999999998 999999999
Q ss_pred CCeeeCCCC--ceEECCcccccccCCCCcc------eeeeeehhhhhhh
Q 035786 648 SSILLDDKF--EVRLGSLSELHAQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 648 ~NILld~~~--~~ki~Dfgla~~~~~~~~~------~~~~~~~~~~y~a 688 (693)
+|||+++++ .+||+|||+++........ ..+...||+.|+|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 236 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFIS 236 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCC
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccC
Confidence 999999998 9999999999886432111 1233467777765
No 287
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.91 E-value=1.6e-24 Score=227.00 Aligned_cols=168 Identities=19% Similarity=0.343 Sum_probs=126.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|.. .+|+.||||++..... ..++|.+|++++.+++||||++++++|.+ ++..++|
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 110 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIV 110 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCcEEEE
Confidence 3577888999999999999996 5789999999975322 24678999999999999999999999986 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++..... ....+++..+..++.+++.||+|||.. +|+||||||+||+++.++.+||+|||++
T Consensus 111 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~ 183 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKK----QKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLG 183 (310)
T ss_dssp EECCCSCBHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC---
T ss_pred EecCCCCCHHHHHHHhcc----cccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccce
Confidence 999999999999974211 114589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .....+++.|+|
T Consensus 184 ~~~~~~~~~-~~~~~~~~~y~a 204 (310)
T 2wqm_A 184 RFFSSKTTA-AHSLVGTPYYMS 204 (310)
T ss_dssp ----------------CCSSCC
T ss_pred eeecCCCcc-ccccCCCeeEeC
Confidence 876432211 122345555543
No 288
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.91 E-value=1.9e-24 Score=224.28 Aligned_cols=145 Identities=20% Similarity=0.315 Sum_probs=124.9
Q ss_pred CCccC-ccccCCeeeEEEEEe---CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETN-LIKKGHSGDLFKGTL---AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~-~ig~G~~G~Vy~~~~---~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
|...+ .||+|+||.||+|.+ .+++.||||++...... .++|.+|++++.+++||||++++++|. .+..++|
T Consensus 18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv 95 (291)
T 1xbb_A 18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--AESWMLV 95 (291)
T ss_dssp EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--SSSEEEE
T ss_pred hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC--CCCcEEE
Confidence 44555 899999999999965 34689999999754322 467999999999999999999999984 3568999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++.. ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 96 ~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQN--------RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp EECCTTEEHHHHHHHC--------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEeCCCCCHHHHHHhC--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 9999999999999753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCC
Q 035786 667 HAQGD 671 (693)
Q Consensus 667 ~~~~~ 671 (693)
+....
T Consensus 165 ~~~~~ 169 (291)
T 1xbb_A 165 KALRA 169 (291)
T ss_dssp EECCT
T ss_pred eeecc
Confidence 88743
No 289
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.91 E-value=9.9e-25 Score=229.92 Aligned_cols=147 Identities=16% Similarity=0.280 Sum_probs=125.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---------KKESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
++|...+.||+|+||.||+|+.. +++.||||.+..... ..+.|.+|++++.+++||||+++++++.. +
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~ 87 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--E 87 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--S
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--C
Confidence 35778899999999999999964 589999999864321 13468899999999999999999998864 3
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---e
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---V 658 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ 658 (693)
..++||||+++|+|.+++... ..+++.....++.+++.||+|||.. +|+||||||+||+++.+.. +
T Consensus 88 ~~~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~ 156 (322)
T 2ycf_A 88 DYYIVLELMEGGELFDKVVGN--------KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLI 156 (322)
T ss_dssp SEEEEEECCTTEETHHHHSTT--------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCE
T ss_pred ceEEEEecCCCCcHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeE
Confidence 489999999999999998643 3489999999999999999999998 9999999999999987654 9
Q ss_pred EECCcccccccCC
Q 035786 659 RLGSLSELHAQGD 671 (693)
Q Consensus 659 ki~Dfgla~~~~~ 671 (693)
||+|||+++....
T Consensus 157 kl~Dfg~~~~~~~ 169 (322)
T 2ycf_A 157 KITDFGHSKILGE 169 (322)
T ss_dssp EECCCTTCEECCC
T ss_pred EEccCccceeccc
Confidence 9999999998744
No 290
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.91 E-value=1e-24 Score=238.61 Aligned_cols=163 Identities=20% Similarity=0.291 Sum_probs=128.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCC---C--eeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE---T--EKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~---~--~~~lv 586 (693)
.|...++||+|+||.||+|+.. +|+.||||++.... +.+.+|++++++++|||||+++++|+... + ..++|
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 3667789999999999999975 58999999986432 22447999999999999999999886421 1 25689
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECCccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGSLSE 665 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~Dfgl 665 (693)
|||+++ +|.+.+..... ....+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 132 ~e~~~~-~l~~~~~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSR----AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EECCCE-EHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred hhcccc-cHHHHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 999985 66666643111 114599999999999999999999998 99999999999999965 6789999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... ....++|++|+|
T Consensus 204 a~~~~~~~~--~~~~~~t~~y~a 224 (420)
T 1j1b_A 204 AKQLVRGEP--NVSYICSRYYRA 224 (420)
T ss_dssp CEECCTTCC--CCSCCSCTTSCC
T ss_pred hhhcccCCC--ceeeeeCCCcCC
Confidence 998643322 233567777765
No 291
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.91 E-value=2.2e-26 Score=254.83 Aligned_cols=302 Identities=22% Similarity=0.200 Sum_probs=176.2
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCC----CccEEEecCCCCCc----CCCcccCCCccCCEEecccCcCCccCc
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLP----ALQVLDLRSCSLSG----SIPGSFGNLSRLNVLYLSGNSLAGNVP 159 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~----~L~~L~Ls~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p 159 (693)
.+..+++|++|++++|.+....+..+...++ +|++|+|++|.++. .+|..+.++++|++|+|++|.+++..+
T Consensus 51 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 130 (461)
T 1z7x_W 51 ALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGL 130 (461)
T ss_dssp HHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHH
T ss_pred HHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHH
Confidence 3455677777777777766544444444455 57777777777763 456667777777777777777654433
Q ss_pred ccc-----CCCCCCCEEEccCCCCCCc----CchhhhcCcCCCeeecccccCCCcCccccc-----CCCCCCEEEccCCc
Q 035786 160 ATL-----GELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQIPSGLY-----SLSSIQFLNLSDNA 225 (693)
Q Consensus 160 ~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-----~l~~L~~L~Ls~N~ 225 (693)
..+ ...++|++|+|++|.+++. ++..+..+++|++|++++|.+++..+..+. ..++|+.|++++|.
T Consensus 131 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 210 (461)
T 1z7x_W 131 QLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCG 210 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSC
T ss_pred HHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCC
Confidence 322 2245677777777777653 345556667777777777776543333332 24567777777777
Q ss_pred cccc----CCccccCCCCCCEEEccCCcCcccC-----chhhhcCcccccccccccccccc----CCCcccCCCCCCCEE
Q 035786 226 LTGF----IPSEVGNLDKLIELDLSKNSISGSL-----PLELRGLRNLAKLVISENGLEGQ----LSEGLFPTLDQLQVV 292 (693)
Q Consensus 226 l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L 292 (693)
+++. ++..+..+++|++|++++|.+++.. +..+..+++|++|++++|.+++. ++.. +..+++|+.|
T Consensus 211 l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~-l~~~~~L~~L 289 (461)
T 1z7x_W 211 VTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV-LRAKESLKEL 289 (461)
T ss_dssp CBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH-HHHCTTCCEE
T ss_pred CcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH-HhhCCCcceE
Confidence 6653 4555666677777777777665432 22223466777777777766542 3322 2445667777
Q ss_pred EccCCcCCCcCccccc-----CCCCCCEEEccCCcCccc----CCccCcCCCCCCcEEEccCCccceecCC-------CC
Q 035786 293 DLSGNKLDGALPATLF-----LRPNLRFLDLSRNNITGS----WPILSTNGNASGAVFNISNNMLYGDLNS-------SS 356 (693)
Q Consensus 293 ~Ls~N~l~g~~p~~l~-----~~~~L~~L~Ls~N~l~g~----~p~~~~~~~~~l~~l~ls~N~l~g~~~~-------~~ 356 (693)
++++|.+++..+..+. ..++|+.|++++|++++. +|. .+..++.|+.|++++|.+.+..+. ..
T Consensus 290 ~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 368 (461)
T 1z7x_W 290 SLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS-VLAQNRFLLELQISNNRLEDAGVRELCQGLGQP 368 (461)
T ss_dssp ECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH-HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTST
T ss_pred ECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH-HHhhCCCccEEEccCCccccccHHHHHHHHcCC
Confidence 7777766544332222 124677777777776643 221 223345667777777766543221 11
Q ss_pred CCCCCEEEccCCccee----ecCCCcC-----cccccCCCcCCC
Q 035786 357 FRKFSLIDLSSNYFQG----TVADDRG-----RNVSLGRNCLQS 391 (693)
Q Consensus 357 ~~~l~~ldLs~N~l~g----~ip~~~~-----~~~~l~~n~l~g 391 (693)
.++|+.|+|++|.+++ .+|..+. +.+++++|.+++
T Consensus 369 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 369 GSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred CCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 4566777777777665 4443322 245666665543
No 292
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.91 E-value=2e-24 Score=228.09 Aligned_cols=154 Identities=22% Similarity=0.444 Sum_probs=128.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcE--EEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTT--VVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~--vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|+.. +|.. ||||++..... ..+.|.+|++++.++ +||||+++++++.+ ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-CCceEE
Confidence 34777889999999999999964 5664 59999865322 246799999999999 99999999999875 468899
Q ss_pred EEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 586 VYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
||||+++|+|.++++...... ......+++.++..++.+++.||+|||.. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997542000 01124589999999999999999999998 9999999999999999999
Q ss_pred eEECCccccccc
Q 035786 658 VRLGSLSELHAQ 669 (693)
Q Consensus 658 ~ki~Dfgla~~~ 669 (693)
+||+|||+++..
T Consensus 181 ~kL~Dfg~~~~~ 192 (327)
T 1fvr_A 181 AKIADFGLSRGQ 192 (327)
T ss_dssp EEECCTTCEESS
T ss_pred EEEcccCcCccc
Confidence 999999999864
No 293
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.91 E-value=2.7e-24 Score=223.32 Aligned_cols=166 Identities=17% Similarity=0.257 Sum_probs=138.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .+++.+|++++.+++|+++++.+++|...+...++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 35678889999999999999996 6799999999865432 346899999999999999888888886656778999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla 666 (693)
+ +|+|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||++
T Consensus 87 ~-~~~L~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 87 L-GPSLEDLFNFCS-------RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp C-CCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred c-CCCHHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 9 999999997432 3599999999999999999999998 99999999999999 58899999999999
Q ss_pred cccCCCCcc------eeeeeehhhhhhh
Q 035786 667 HAQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~------~~~~~~~~~~y~a 688 (693)
+........ ......||+.|+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a 183 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYAS 183 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCC
T ss_pred ccccccccccccccccccccccccccCC
Confidence 987443221 1234567777765
No 294
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.91 E-value=1.1e-24 Score=252.95 Aligned_cols=158 Identities=20% Similarity=0.268 Sum_probs=131.4
Q ss_pred CCCCccCccccCCeeeEEEEEeC--CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe----e
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA--GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETE----K 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~--~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~----~ 583 (693)
++|...+.||+|+||.||+|... +|+.||||++..... ..+.|.+|++++.+++|||||+++++|...+.. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 46788889999999999999974 689999999864322 245789999999999999999999998754321 6
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|+|||||++|+|.+++.. .++|.++..|+.+|+.||+|||+. +||||||||+|||++++ .+||+||
T Consensus 160 ~lv~E~~~g~~L~~~~~~----------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DF 225 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDL 225 (681)
T ss_dssp EEEEECCCCEECC----C----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCC
T ss_pred EEEEEeCCCCcHHHHHhC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEec
Confidence 999999999999887642 489999999999999999999998 89999999999999986 9999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++...... ..+||+.|+|
T Consensus 226 G~a~~~~~~~-----~~~gt~~y~a 245 (681)
T 2pzi_A 226 GAVSRINSFG-----YLYGTPGFQA 245 (681)
T ss_dssp TTCEETTCCS-----CCCCCTTTSC
T ss_pred ccchhcccCC-----ccCCCccccC
Confidence 9999875442 2456777765
No 295
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.91 E-value=2.5e-24 Score=236.10 Aligned_cols=162 Identities=14% Similarity=0.192 Sum_probs=134.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcC------CCCCccceeEEEEcCCCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRV------SHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l------~H~niv~l~g~~~~~~~~~~ 584 (693)
..|...++||+|+||.||+|... +++.||||++.......+++.+|++++..+ +|+||+++++++.. ....+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-RNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-TTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-CCeEE
Confidence 45777889999999999999864 589999999976544456788899888877 57799999999875 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc--eEECC
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE--VRLGS 662 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~--~ki~D 662 (693)
+||||+. |+|.+++..... ..++|..+..|+.|++.||+|||+. +||||||||+|||++.++. +||+|
T Consensus 176 lv~e~~~-~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKF------QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred EEEeccC-CCHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 9999996 699999976432 3489999999999999999999998 9999999999999999887 99999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++....... ..+||++|+|
T Consensus 246 FG~a~~~~~~~~----~~~gt~~y~a 267 (429)
T 3kvw_A 246 FGSSCYEHQRVY----TYIQSRFYRA 267 (429)
T ss_dssp CTTCEETTCCCC----SSCSCGGGCC
T ss_pred cccceecCCccc----ccCCCCCccC
Confidence 999987643322 2456666665
No 296
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.91 E-value=1.9e-24 Score=226.86 Aligned_cols=146 Identities=18% Similarity=0.325 Sum_probs=121.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEc-----------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLE----------- 578 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~----------- 578 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+++.+|++++++++|||||++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 45777889999999999999975 4899999998754332 4679999999999999999999998742
Q ss_pred --CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CC
Q 035786 579 --HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DK 655 (693)
Q Consensus 579 --~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~ 655 (693)
.....++||||++ |+|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++ ++
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ---------GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred ccccCceeEEeeccC-CCHHHHhhc---------CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 2246789999998 799999863 2488999999999999999999998 999999999999997 57
Q ss_pred CceEECCcccccccC
Q 035786 656 FEVRLGSLSELHAQG 670 (693)
Q Consensus 656 ~~~ki~Dfgla~~~~ 670 (693)
+.+||+|||+++...
T Consensus 158 ~~~kl~Dfg~~~~~~ 172 (320)
T 2i6l_A 158 LVLKIGDFGLARIMD 172 (320)
T ss_dssp TEEEECCCTTCBCC-
T ss_pred CeEEEccCccccccC
Confidence 899999999999863
No 297
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=236.33 Aligned_cols=167 Identities=16% Similarity=0.251 Sum_probs=120.7
Q ss_pred cCccccCCeeeEEEEEeC---CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEc-CCCeeEEEEccCCC
Q 035786 517 TNLIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLE-HETEKLLVYKYMVC 592 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~~lv~ey~~~ 592 (693)
.++||+|+||.||+|+.. +++.||||++..... .+.+.+|++++.+++|||||+++++|.. .+...++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 458999999999999965 478999999975432 4568899999999999999999999864 3457899999997
Q ss_pred CChhhhhhccCCC-CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee----CCCCceEECCccccc
Q 035786 593 GDLASSLHRVTDL-EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----DDKFEVRLGSLSELH 667 (693)
Q Consensus 593 GsL~~~l~~~~~~-~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----d~~~~~ki~Dfgla~ 667 (693)
|+|.+++...... .......+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 180 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence 5888888632110 011123599999999999999999999998 89999999999999 778999999999999
Q ss_pred ccCCCCc--ceeeeeehhhhhhh
Q 035786 668 AQGDSHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~--~~~~~~~~~~~y~a 688 (693)
....... ......+||++|+|
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~a 203 (405)
T 3rgf_A 181 LFNSPLKPLADLDPVVVTFWYRA 203 (405)
T ss_dssp ----------------CCCTTCC
T ss_pred ecCCCCcccccCCCceecCcccC
Confidence 8743221 22344677888876
No 298
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.3e-23 Score=213.34 Aligned_cols=158 Identities=23% Similarity=0.286 Sum_probs=90.3
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|+.|+|++|.+++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 45666666666666665656666666666666666666655555666666666666666666555555555666666666
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
++|.+++..+..+..+++|+.|+|++|++++..+..|+.+++|++|+|++|++++..+..+..+++|++|+|++|.++
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 666655444444555555555555555555544445555555555555555555444444444444444444444443
No 299
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=2.1e-25 Score=239.17 Aligned_cols=254 Identities=19% Similarity=0.157 Sum_probs=175.8
Q ss_pred EEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCC----cccCCCc-cCCEEecccCcCCccCccccCCC-----C
Q 035786 97 SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP----GSFGNLS-RLNVLYLSGNSLAGNVPATLGEL-----K 166 (693)
Q Consensus 97 ~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 166 (693)
+++++.|.++|.+|..+. ..++|++|||++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTS-IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHT-SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHh-CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 457788888888888764 25569999999999887766 6777888 89999999999887777776664 8
Q ss_pred CCCEEEccCCCCCCcCchhhhc----C-cCCCeeecccccCCCcCcccc----cC-CCCCCEEEccCCcccccCC----c
Q 035786 167 KLSNLDLSRNLLTGEIPNAISL----L-GNLTRLNLASNFFTGQIPSGL----YS-LSSIQFLNLSDNALTGFIP----S 232 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~g~~p~~~----~~-l~~L~~L~Ls~N~l~g~~p----~ 232 (693)
+|++|+|++|.+++..+..+.. + ++|++|+|++|.+++..+..+ .. .++|++|+|++|++++..+ .
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 8999999999988777665444 3 788999999998876655443 33 3688888888888875333 3
Q ss_pred cccCCC-CCCEEEccCCcCcccCchhhhc----C-cccccccccccccccc----CCCcccCCCCCCCEEEccCCcCCCc
Q 035786 233 EVGNLD-KLIELDLSKNSISGSLPLELRG----L-RNLAKLVISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLDGA 302 (693)
Q Consensus 233 ~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~----l-~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L~Ls~N~l~g~ 302 (693)
.+..++ +|++|+|++|++++..+..+.. + ++|++|+|++|.+++. ++..+....++|+.|+|++|.+++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 344554 8888888888888777655443 3 5888888888887652 3333222235788888888887765
Q ss_pred Cc----ccccCCCCCCEEEccCCcCcccCCc------cCcCCCCCCcEEEccCCcccee
Q 035786 303 LP----ATLFLRPNLRFLDLSRNNITGSWPI------LSTNGNASGAVFNISNNMLYGD 351 (693)
Q Consensus 303 ~p----~~l~~~~~L~~L~Ls~N~l~g~~p~------~~~~~~~~l~~l~ls~N~l~g~ 351 (693)
.+ ..+..+++|+.|+|++|++++..+. ..+..+..|+.||+++|.+.+.
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 44 3345567778888887775432211 1223444555666666665443
No 300
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.91 E-value=9.9e-25 Score=232.36 Aligned_cols=165 Identities=18% Similarity=0.141 Sum_probs=129.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC----CCcEEEEEEeccccc------------CHHHHHHHHHHHhcCCCCCccceeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSF------------KKESYMMELDLFSRVSHARLVPLLGQ 575 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~------------~~~~f~~Ei~~l~~l~H~niv~l~g~ 575 (693)
++|...+.||+|+||.||+|+.. ++..||||+...... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 45777889999999999999975 578899999865432 12357789999999999999999999
Q ss_pred EEcC---CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 576 CLEH---ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 576 ~~~~---~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+.+. +...++||||+ +|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 184 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLL 184 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEE
Confidence 8752 35689999999 999999997532 489999999999999999999998 99999999999999
Q ss_pred CCCC--ceEECCcccccccCCCCc------ceeeeeehhhhhhh
Q 035786 653 DDKF--EVRLGSLSELHAQGDSHQ------NVLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~--~~ki~Dfgla~~~~~~~~------~~~~~~~~~~~y~a 688 (693)
+.++ .+||+|||+++.+..... .......||+.|+|
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 228 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTS 228 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCC
T ss_pred ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccC
Confidence 9887 999999999988632211 11133567777765
No 301
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.90 E-value=1.5e-24 Score=235.39 Aligned_cols=163 Identities=20% Similarity=0.250 Sum_probs=128.8
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----eeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET-----EKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-----~~~lv~ 587 (693)
.|...++||+|+||.||+|+..++..||||++..... ...+|+++++.++|||||+++++|..... ..++||
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 4777889999999999999987777799999864332 23369999999999999999999865322 267999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCceEECCcccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSEL 666 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgla 666 (693)
||++++.+....+... ....+++.....++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||++
T Consensus 118 e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 118 EYVPETVYRASRHYAK-----LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp ECCSEEHHHHHHHHHH-----TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eccCccHHHHHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 9999765443332111 114589999999999999999999998 999999999999999 7999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... ....++|++|+|
T Consensus 190 ~~~~~~~~--~~~~~~t~~y~a 209 (394)
T 4e7w_A 190 KILIAGEP--NVSYICSRYYRA 209 (394)
T ss_dssp EECCTTCC--CCSSCSCGGGCC
T ss_pred ccccCCCC--CcccccCcCccC
Confidence 98743322 233566777765
No 302
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.90 E-value=2.4e-24 Score=227.85 Aligned_cols=152 Identities=18% Similarity=0.325 Sum_probs=127.8
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCC-CCCccceeEEEEc-------CCCe
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVS-HARLVPLLGQCLE-------HETE 582 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~-H~niv~l~g~~~~-------~~~~ 582 (693)
+|...++||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++.+++ |||||++++++.. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 577788999999999999996 46899999998554332 567899999999996 9999999999852 2234
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++|+||++ |+|.+++..... ...++|.++..|+.+++.||+|||.. .++|+||||||+|||+++++.+||+|
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMES-----RGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHT-----TCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred EEEEEEecC-CCHHHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEec
Confidence 789999996 899999875321 13599999999999999999999987 23499999999999999999999999
Q ss_pred cccccccCC
Q 035786 663 LSELHAQGD 671 (693)
Q Consensus 663 fgla~~~~~ 671 (693)
||+++....
T Consensus 182 fg~~~~~~~ 190 (337)
T 3ll6_A 182 FGSATTISH 190 (337)
T ss_dssp CTTCBCCSS
T ss_pred Cccceeccc
Confidence 999998743
No 303
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.90 E-value=2.4e-24 Score=227.06 Aligned_cols=167 Identities=24% Similarity=0.371 Sum_probs=134.6
Q ss_pred HhCCCCccCccccCCeeeEEEEEe--CCCcEEEEEEecccccC---HHHHHHHHHHHhcC---CCCCccceeEEEEc---
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL--AGGTTVVVKKVSLHSFK---KESYMMELDLFSRV---SHARLVPLLGQCLE--- 578 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~--~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l---~H~niv~l~g~~~~--- 578 (693)
+.++|...+.||+|+||.||+|+. .+|+.||||++...... ...+.+|++++..+ +||||++++++|..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456788889999999999999997 46889999998643322 34677888887766 89999999999862
Q ss_pred -CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 579 -HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 579 -~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
.....++||||++ |+|.+++..... ..+++..+..++.+++.||+|||.. +|+||||||+||+++.++.
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~ 158 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE------PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQ 158 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCC
Confidence 2346789999998 799999976432 3489999999999999999999998 9999999999999999999
Q ss_pred eEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 658 VRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 658 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+||+|||+++....... .....+|+.|+|
T Consensus 159 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~a 187 (326)
T 1blx_A 159 IKLADFGLARIYSFQMA--LTSVVVTLWYRA 187 (326)
T ss_dssp EEECSCCSCCCCCGGGG--GCCCCCCCTTCC
T ss_pred EEEecCcccccccCCCC--ccccccccceeC
Confidence 99999999987643221 223445555544
No 304
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.90 E-value=3.3e-24 Score=223.89 Aligned_cols=146 Identities=16% Similarity=0.249 Sum_probs=127.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++.+++||||+++++++.+ +...++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 88 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-TTHYYLVMQLV 88 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-CCEEEEEEEcC
Confidence 4777889999999999999974 689999999975433 34678999999999999999999998875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSELH 667 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla~ 667 (693)
++|+|.+++... ..+++.....++.+++.||+|||.. +|+||||||+||++ ++++.+||+|||+++
T Consensus 89 ~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 89 SGGELFDRILER--------GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp CSCBHHHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred CCccHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999753 2489999999999999999999998 99999999999999 788999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
...
T Consensus 158 ~~~ 160 (304)
T 2jam_A 158 MEQ 160 (304)
T ss_dssp CCC
T ss_pred ecC
Confidence 753
No 305
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.90 E-value=1.6e-24 Score=230.05 Aligned_cols=153 Identities=21% Similarity=0.274 Sum_probs=126.8
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHH-HhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDL-FSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .+++..|+.+ +..++|||||+++++|.+ ++..++|
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv 128 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWIC 128 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-SSCEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-CCcEEEE
Confidence 34577778999999999999996 57999999999754333 3456666666 788899999999999876 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++ +|.+++..... ....++|..+..|+.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++
T Consensus 129 ~e~~~~-~L~~~l~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 201 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVID----KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS 201 (340)
T ss_dssp ECCCSE-EHHHHHHHHHH----TSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred HHHhhC-cHHHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence 999985 99999874211 1145999999999999999999999632 7999999999999999999999999999
Q ss_pred cccCC
Q 035786 667 HAQGD 671 (693)
Q Consensus 667 ~~~~~ 671 (693)
+....
T Consensus 202 ~~~~~ 206 (340)
T 3an0_A 202 GYLVD 206 (340)
T ss_dssp HHHSC
T ss_pred eeccc
Confidence 87643
No 306
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.90 E-value=1.7e-24 Score=224.08 Aligned_cols=152 Identities=20% Similarity=0.200 Sum_probs=118.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|...++.++||||+++++++.+ ++..++||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv~ 85 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWICM 85 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSSEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-cCCEEEEE
Confidence 4577788999999999999996 57999999999654322 2334555566888999999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||++ |+|.++++.... ....+++..+..|+.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++
T Consensus 86 e~~~-~~l~~~l~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVID----KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 158 (290)
T ss_dssp ECCS-EEHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred ehhc-cchHHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcc
Confidence 9998 599888864211 1145999999999999999999999742 79999999999999999999999999998
Q ss_pred ccCC
Q 035786 668 AQGD 671 (693)
Q Consensus 668 ~~~~ 671 (693)
....
T Consensus 159 ~~~~ 162 (290)
T 3fme_A 159 YLVD 162 (290)
T ss_dssp ----
T ss_pred cccc
Confidence 7643
No 307
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.90 E-value=1.2e-24 Score=234.02 Aligned_cols=160 Identities=11% Similarity=0.036 Sum_probs=116.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHH---HHHhcCCCCCcccee-------EEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMEL---DLFSRVSHARLVPLL-------GQCL 577 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei---~~l~~l~H~niv~l~-------g~~~ 577 (693)
.|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|+ +.+.+ +|||||+++ +++.
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence 4667889999999999999964 7899999999764432 45677885 55555 799988754 3332
Q ss_pred cCC----------------CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHH------HHHHHHHHHHHhhhccC
Q 035786 578 EHE----------------TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITR------LKIAIGAAEGLSYLHHE 635 (693)
Q Consensus 578 ~~~----------------~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r------~~ia~~ia~gl~yLH~~ 635 (693)
... ...++|||||+ |+|.++++... ..+.+..+ ..++.|+++||+|||+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-------~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-------FVYVFRGDEGILALHILTAQLIRLAANLQSK 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-------HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-------cccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence 211 23699999999 99999998642 13566667 88999999999999998
Q ss_pred CCCCeEecCCCCCCeeeCCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 636 CNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 636 ~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|+||||||+|||+++++.+||+|||+++..+.... ...+|+.|+|
T Consensus 214 ---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~----~~~~t~~y~a 259 (371)
T 3q60_A 214 ---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP----ASSVPVTYAP 259 (371)
T ss_dssp ---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE----GGGSCGGGCC
T ss_pred ---CCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc----CccCCcCCcC
Confidence 899999999999999999999999999998754321 2344466654
No 308
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=1.1e-25 Score=238.65 Aligned_cols=263 Identities=23% Similarity=0.272 Sum_probs=156.2
Q ss_pred CCCCCCcceeecCCCEeEEEcCCCCcccccccCCccCccccccC--CCCCEEEccCCCCCCcCchHhhhCCCCccEEEec
Q 035786 49 EPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNL--TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLR 126 (693)
Q Consensus 49 ~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L--~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls 126 (693)
..|..|.++.|+...++.+++++.... + ..+..+ +.++.+++++|.+.+..|..+ .+++|++|+|+
T Consensus 34 ~vc~~W~~~~~~~~~~~~l~l~~~~~~------~----~~~~~~~~~~l~~L~l~~n~l~~~~~~~~--~~~~L~~L~L~ 101 (336)
T 2ast_B 34 GVCKRWYRLASDESLWQTLDLTGKNLH------P----DVTGRLLSQGVIAFRCPRSFMDQPLAEHF--SPFRVQHMDLS 101 (336)
T ss_dssp SSCHHHHHHHTCSTTSSEEECTTCBCC------H----HHHHHHHHTTCSEEECTTCEECSCCCSCC--CCBCCCEEECT
T ss_pred HHHHHHHHHhcCchhheeeccccccCC------H----HHHHhhhhccceEEEcCCccccccchhhc--cCCCCCEEEcc
Confidence 347689999987656777887764211 1 133444 566677777776666655532 36777777777
Q ss_pred CCCCCcC-CCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCC-CCCCc-CchhhhcCcCCCeeecccc-cC
Q 035786 127 SCSLSGS-IPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN-LLTGE-IPNAISLLGNLTRLNLASN-FF 202 (693)
Q Consensus 127 ~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l 202 (693)
+|.+++. +|..+.++++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+..+++|++|++++| .+
T Consensus 102 ~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 102 NSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp TCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTC
T ss_pred CCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCc
Confidence 7766654 5666666777777777777666666666666777777777776 55542 5555666667777777776 66
Q ss_pred CCc-CcccccCCC-CCCEEEccCC--ccc-ccCCccccCCCCCCEEEccCCc-CcccCchhhhcCcccccccccccc-cc
Q 035786 203 TGQ-IPSGLYSLS-SIQFLNLSDN--ALT-GFIPSEVGNLDKLIELDLSKNS-ISGSLPLELRGLRNLAKLVISENG-LE 275 (693)
Q Consensus 203 ~g~-~p~~~~~l~-~L~~L~Ls~N--~l~-g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~-l~ 275 (693)
++. ++..+..++ +|++|++++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.
T Consensus 182 ~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 182 TEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred ChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 543 455566666 6777777666 343 3445555666666666666666 555555566666666666666663 11
Q ss_pred ccCCCcccCCCCCCCEEEccCCcCCCcCcccccCC-CCCCEEEccCCcCcccCC
Q 035786 276 GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 276 g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~-~~L~~L~Ls~N~l~g~~p 328 (693)
.... ..+..+++|+.|++++| ++.. .+..+ .+++.|++++|++++..|
T Consensus 262 ~~~~-~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 262 PETL-LELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp GGGG-GGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTC
T ss_pred HHHH-HHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccC
Confidence 1100 02345566666666665 2221 11111 124444556666665555
No 309
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.1e-23 Score=210.04 Aligned_cols=197 Identities=20% Similarity=0.248 Sum_probs=137.1
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCc-CCccCccccCCCCCCCEEEccC-CCCCCcCchhhhcCcCCCee
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNS-LAGNVPATLGELKKLSNLDLSR-NLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 195 (693)
++|++|+|++|++++..+..|+++++|++|+|++|. +++..+..|.++++|++|+|++ |.+++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478888888888887777788888888888888886 7766666788888888888887 88886666677788888888
Q ss_pred ecccccCCCcCcccccCCCCCC---EEEccCC-cccccCCccccCCCCCC-EEEccCCcCcccCchhhhcCccccccccc
Q 035786 196 NLASNFFTGQIPSGLYSLSSIQ---FLNLSDN-ALTGFIPSEVGNLDKLI-ELDLSKNSISGSLPLELRGLRNLAKLVIS 270 (693)
Q Consensus 196 ~Ls~N~l~g~~p~~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 270 (693)
++++|.+++ +|. +..+++|+ .|++++| ++++..+..|.++++|+ +|++++|+++...+..+.. ++|++|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 888888875 565 77777777 7777777 77766666677777777 7777777776332223333 566666666
Q ss_pred ccc-ccccCCCcccCCC-CCCCEEEccCCcCCCcCcccccCCCCCCEEEccCC
Q 035786 271 ENG-LEGQLSEGLFPTL-DQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRN 321 (693)
Q Consensus 271 ~N~-l~g~i~~~~~~~l-~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N 321 (693)
+|+ ++ .++...|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 188 ~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCcc-cCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 663 55 3444445555 6666666666666543222 3455566655544
No 310
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.90 E-value=1.1e-23 Score=217.95 Aligned_cols=163 Identities=17% Similarity=0.303 Sum_probs=137.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++.+++||||+++++++.+ +...++|+
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 100 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIVG 100 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-CCeEEEEE
Confidence 45888899999999999999975 68999999986533 235689999999999999999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC---CceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK---FEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~---~~~ki~Dfg 664 (693)
||+++|+|.+++... ..+++.++..++.+++.||+|||.. +|+||||||+||+++.+ ..+||+|||
T Consensus 101 e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 101 ELYTGGELFDEIIKR--------KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp CCCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EccCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccC
Confidence 999999999998753 2489999999999999999999998 99999999999999754 479999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .....+++.|+|
T Consensus 170 ~~~~~~~~~~--~~~~~~~~~y~a 191 (287)
T 2wei_A 170 LSTCFQQNTK--MKDRIGTAYYIA 191 (287)
T ss_dssp GGGTBCCCSS--CSCHHHHHTTCC
T ss_pred cceeecCCCc--cccccCcccccC
Confidence 9987643322 223456777765
No 311
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=3e-24 Score=225.09 Aligned_cols=202 Identities=22% Similarity=0.227 Sum_probs=148.3
Q ss_pred CCCEEEccCCCCCCcCchhh--hcCcCCCeeecccccCCCcCc----ccccCCCCCCEEEccCCcccccCCccccCCCCC
Q 035786 167 KLSNLDLSRNLLTGEIPNAI--SLLGNLTRLNLASNFFTGQIP----SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKL 240 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 240 (693)
+|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 34444444444444444444 445555555555555544333 234467778888888888877777888888888
Q ss_pred CEEEccCCcCccc--C--chhhhcCccccccccccccccc--cCCCcccCCCCCCCEEEccCCcCCCcCcccccCC---C
Q 035786 241 IELDLSKNSISGS--L--PLELRGLRNLAKLVISENGLEG--QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR---P 311 (693)
Q Consensus 241 ~~L~Ls~N~l~g~--~--p~~~~~l~~L~~L~Ls~N~l~g--~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~---~ 311 (693)
++|+|++|++.+. + +..+..+++|++|+|++|+++. ..+..++..+++|++|+|++|++++..|..+..+ +
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 251 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSS 251 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCT
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcC
Confidence 8888888887653 2 2334789999999999999973 2222245678999999999999999988888776 6
Q ss_pred CCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCccee
Q 035786 312 NLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 312 ~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g 372 (693)
+|++|+|++|+|+ .+|... .++|+.|+|++|++++......+++|+.|+|++|+|+.
T Consensus 252 ~L~~L~Ls~N~l~-~lp~~~---~~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 252 ALNSLNLSFAGLE-QVPKGL---PAKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TCCCEECCSSCCC-SCCSCC---CSCCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTTSC
T ss_pred cCCEEECCCCCCC-chhhhh---cCCCCEEECCCCcCCCCchhhhCCCccEEECcCCCCCC
Confidence 9999999999999 777543 27899999999999984223678999999999999864
No 312
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.90 E-value=5e-24 Score=229.29 Aligned_cols=159 Identities=18% Similarity=0.295 Sum_probs=128.5
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----e
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHET-----E 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-----~ 582 (693)
+.|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++.+++|||||+++++|...+. .
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 4577788999999999999986 46899999999754333 4678899999999999999999999875322 1
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||++ |+|.+++. ..+++..+..++.+++.||+|||.. +|+||||||+|||+++++.+||+|
T Consensus 122 ~~lv~e~~~-~~l~~~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~D 187 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILD 187 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECS
T ss_pred EEEEEcccc-ccHHHHhh----------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEe
Confidence 399999998 68888774 2389999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++...... +..++|++|+|
T Consensus 188 fg~a~~~~~~~----~~~~~t~~y~a 209 (371)
T 4exu_A 188 FGLARHADAEM----TGYVVTRWYRA 209 (371)
T ss_dssp TTCC------------CTTCCCTTSC
T ss_pred cCcccccccCc----CCcccCccccC
Confidence 99998764322 22445666654
No 313
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.90 E-value=8.8e-24 Score=234.37 Aligned_cols=165 Identities=16% Similarity=0.220 Sum_probs=134.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|...+.||+|+||.||+|+. .+++.||||.+..... .+++.+|++++..++|++.+..+.++.......++||||+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 4678889999999999999996 5689999998765433 3458899999999988665555555544456789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSELH 667 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla~ 667 (693)
+|+|.++++... ..++|.++..|+.||+.||+|||.. +||||||||+|||+ ++++.+||+|||+++
T Consensus 86 -g~sL~~ll~~~~-------~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 86 -GPSLEDLFNFCS-------RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp -CCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred -CCCHHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 999999997532 3599999999999999999999998 99999999999999 688999999999999
Q ss_pred ccCCCCcc------eeeeeehhhhhhh
Q 035786 668 AQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~------~~~~~~~~~~y~a 688 (693)
.+...... ......||+.|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~a 181 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYAS 181 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCC
T ss_pred eccCCccccccccccccccCCCccccC
Confidence 87443221 1224678888876
No 314
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.90 E-value=3e-24 Score=222.36 Aligned_cols=148 Identities=22% Similarity=0.363 Sum_probs=121.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC--CCc--EEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA--GGT--TVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~--~g~--~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|++. +++ .||||++..... ..++|.+|++++.+++||||+++++++.+ ...
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 95 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPM 95 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSC
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc--CCc
Confidence 34777889999999999999863 333 699999865321 24679999999999999999999998875 348
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++|+||+++|+|.+++.... ..+++.++.+++.++++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Df 165 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ-------GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 165 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG-------GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCC
T ss_pred eeeEecccCCCHHHHHHhcc-------CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccc
Confidence 89999999999999997532 2489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCC
Q 035786 664 SELHAQGD 671 (693)
Q Consensus 664 gla~~~~~ 671 (693)
|+++....
T Consensus 166 g~~~~~~~ 173 (291)
T 1u46_A 166 GLMRALPQ 173 (291)
T ss_dssp TTCEECCC
T ss_pred cccccccc
Confidence 99988743
No 315
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.90 E-value=7.9e-24 Score=223.91 Aligned_cols=162 Identities=15% Similarity=0.221 Sum_probs=135.3
Q ss_pred CCCCccCccccCCeeeEEEEEe--CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCC------ccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL--AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR------LVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~--~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n------iv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|.. .+|+.||||++.......+.+.+|++++.+++|++ ++++++++.+ ++..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-HGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-TTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-CCcE
Confidence 3577788999999999999986 46899999999765444577899999999987765 9999998875 4688
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD--------- 654 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~--------- 654 (693)
++||||+ +|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGF------LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred EEEEcCC-CCCHHHHHHhcCC------CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 9999999 8999999976432 3589999999999999999999998 9999999999999997
Q ss_pred ----------CCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 655 ----------KFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 655 ----------~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++.+||+|||+++....... ...||+.|+|
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~gt~~y~a 202 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEHHS----TLVSTRHYRA 202 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSCCC----SSCSCGGGCC
T ss_pred ccccccccccCCCceEeeCcccccCccccc----cccCCccccC
Confidence 67899999999988644322 2456666665
No 316
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.90 E-value=8.2e-24 Score=225.91 Aligned_cols=159 Identities=18% Similarity=0.294 Sum_probs=128.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----e
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHET-----E 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-----~ 582 (693)
++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++.+++|||||++++++...+. .
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4567778999999999999996 46999999999654332 4578999999999999999999999865322 2
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||++ |+|.+++. ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 104 ~~lv~e~~~-~~l~~~~~----------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~D 169 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILD 169 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECS
T ss_pred EEEEecccc-CCHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEee
Confidence 489999998 68988774 2389999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++...... +...+|++|+|
T Consensus 170 fg~~~~~~~~~----~~~~~t~~y~a 191 (353)
T 3coi_A 170 FGLARHADAEM----TGYVVTRWYRA 191 (353)
T ss_dssp TTCTTC------------CCSBCCSC
T ss_pred cccccCCCCCc----cccccCcCcCC
Confidence 99998764322 22345555544
No 317
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.90 E-value=6.1e-24 Score=230.16 Aligned_cols=164 Identities=23% Similarity=0.297 Sum_probs=133.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC--------CCCccceeEEEEc---C
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS--------HARLVPLLGQCLE---H 579 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~--------H~niv~l~g~~~~---~ 579 (693)
++|...+.||+|+||.||+|+. .+++.||||++.......+.+.+|++++.+++ |+|||++++++.. .
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~ 116 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN 116 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence 4577888999999999999985 56899999999765444678999999999996 7889999998862 2
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF--- 656 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~--- 656 (693)
....++||||+ +|+|.+++..... ..+++..+..|+.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 117 ~~~~~lv~e~~-~~~l~~~~~~~~~------~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 117 GTHICMVFEVL-GHHLLKWIIKSNY------QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEEEEEEECCC-CCBHHHHHHHTTT------SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred CceEEEEEecc-CccHHHHHHhccc------CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 34688999999 5677777654321 35899999999999999999999854 799999999999999775
Q ss_pred ----------------------------------------------ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 ----------------------------------------------EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 ----------------------------------------------~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+||+|||+++...... +..+||++|+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~y~a 261 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQYRS 261 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGGGCC
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCcccC
Confidence 89999999999874332 23467777765
No 318
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=3.2e-25 Score=239.91 Aligned_cols=208 Identities=18% Similarity=0.190 Sum_probs=94.6
Q ss_pred CCCccEEEecCCCCCcCC----CcccCCCccCCEEecccC---cCCccCcccc-------CCCCCCCEEEccCCCCCC--
Q 035786 117 LPALQVLDLRSCSLSGSI----PGSFGNLSRLNVLYLSGN---SLAGNVPATL-------GELKKLSNLDLSRNLLTG-- 180 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~----p~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls~N~l~~-- 180 (693)
+++|++|+|++|.+++.. +..|.++++|++|+|++| ++.+.+|..+ ..+++|++|+|++|.+++
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 555555555555555432 223445555555555553 3333444333 455555555555555554
Q ss_pred --cCchhhhcCcCCCeeecccccCCCcCcccc----cCC---------CCCCEEEccCCccc-ccCC---ccccCCCCCC
Q 035786 181 --EIPNAISLLGNLTRLNLASNFFTGQIPSGL----YSL---------SSIQFLNLSDNALT-GFIP---SEVGNLDKLI 241 (693)
Q Consensus 181 --~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~----~~l---------~~L~~L~Ls~N~l~-g~~p---~~~~~l~~L~ 241 (693)
.+|..+..+++|++|+|++|.+++..+..+ ..+ ++|++|+|++|+++ +.+| ..+..+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 345555555555555555555543222222 222 45555555555554 2222 2334444555
Q ss_pred EEEccCCcCc--c---cCchhhhcCcccccccccccccc----ccCCCcccCCCCCCCEEEccCCcCCCc----Cccccc
Q 035786 242 ELDLSKNSIS--G---SLPLELRGLRNLAKLVISENGLE----GQLSEGLFPTLDQLQVVDLSGNKLDGA----LPATLF 308 (693)
Q Consensus 242 ~L~Ls~N~l~--g---~~p~~~~~l~~L~~L~Ls~N~l~----g~i~~~~~~~l~~L~~L~Ls~N~l~g~----~p~~l~ 308 (693)
+|++++|+++ | ..|..+..+++|++|+|++|.++ +.+|.. +..+++|+.|+|++|++++. +|..+.
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~-l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 269 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA-LKSWPNLRELGLNDCLLSARGAAAVVDAFS 269 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH-GGGCTTCCEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH-HccCCCcCEEECCCCCCchhhHHHHHHHHh
Confidence 5555555544 1 12223444444444444444443 222221 23344444444444444433 233331
Q ss_pred --CCCCCCEEEccCCcCcc
Q 035786 309 --LRPNLRFLDLSRNNITG 325 (693)
Q Consensus 309 --~~~~L~~L~Ls~N~l~g 325 (693)
.+++|+.|+|++|++++
T Consensus 270 ~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 270 KLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp TCSSCCCCEEECCSSCCBH
T ss_pred hccCCCeEEEECcCCcCCH
Confidence 24444444444444443
No 319
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.89 E-value=3.8e-24 Score=224.85 Aligned_cols=164 Identities=18% Similarity=0.300 Sum_probs=130.7
Q ss_pred hCCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.++|...+.||+|+||.||+|+..+ .||||++..... ..+.|.+|++++.+++||||+++++++.+ +...++||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~iv~ 108 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-PPHLAIIT 108 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-SSCEEEEC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCceEEEe
Confidence 3557788999999999999999854 599999865332 24568899999999999999999999986 45789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||+++ ++.+||+|||+++
T Consensus 109 e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK-------IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFS 177 (319)
T ss_dssp BCCCSEEHHHHTTSSC-------CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred ecccCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcc
Confidence 9999999999997532 3589999999999999999999998 999999999999998 6799999999988
Q ss_pred ccCCC----Ccceeeeeehhhhhhh
Q 035786 668 AQGDS----HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~----~~~~~~~~~~~~~y~a 688 (693)
..+.. .........|++.|+|
T Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~y~a 202 (319)
T 2y4i_B 178 ISGVLQAGRREDKLRIQNGWLCHLA 202 (319)
T ss_dssp ----------CCSCBCCSGGGGTSC
T ss_pred ccccccccccccccccCCCcccccC
Confidence 75221 1111233456777765
No 320
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.4e-23 Score=207.69 Aligned_cols=203 Identities=20% Similarity=0.232 Sum_probs=163.8
Q ss_pred CCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCC-CCCcCchhhhcCcCCCeeeccc-ccCCCcCcccc
Q 035786 133 SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-LTGEIPNAISLLGNLTRLNLAS-NFFTGQIPSGL 210 (693)
Q Consensus 133 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~ 210 (693)
.+|. +. ++|++|+|++|++++..+..|.++++|++|++++|. +++..+..|..+++|++|++++ |.+++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 43 389999999999998777789999999999999997 8766666889999999999998 99987777788
Q ss_pred cCCCCCCEEEccCCcccccCCccccCCCCCC---EEEccCC-cCcccCchhhhcCcccc-ccccccccccccCCCcccCC
Q 035786 211 YSLSSIQFLNLSDNALTGFIPSEVGNLDKLI---ELDLSKN-SISGSLPLELRGLRNLA-KLVISENGLEGQLSEGLFPT 285 (693)
Q Consensus 211 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~i~~~~~~~ 285 (693)
..+++|++|++++|++++ +|. +..+++|+ +|++++| .+++..+..|.++++|+ +|++++|+++ .+|...|..
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC
Confidence 899999999999999987 666 88888888 9999999 88877777788888898 9999888887 677766665
Q ss_pred CCCCCEEEccCCc-CCCcCcccccCC-CCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 286 LDQLQVVDLSGNK-LDGALPATLFLR-PNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 286 l~~L~~L~Ls~N~-l~g~~p~~l~~~-~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
++|+.|++++|+ +++..+..+..+ ++|+.|++++|+++ .+|.. .+..++.|+++++
T Consensus 179 -~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 -TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp -CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT---TCTTCSEEECTTC
T ss_pred -CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh---HhccCceeeccCc
Confidence 788888888884 886666777777 88888888888887 34432 3445555555544
No 321
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=4.4e-25 Score=238.83 Aligned_cols=241 Identities=19% Similarity=0.260 Sum_probs=199.1
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhh---hCCCCccEEEecCC---CCCcCCCccc-------CCCccCCEEecccCcC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFG---YRLPALQVLDLRSC---SLSGSIPGSF-------GNLSRLNVLYLSGNSL 154 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~---~~l~~L~~L~Ls~n---~l~g~~p~~~-------~~l~~L~~L~Ls~N~l 154 (693)
.+..++.|+.|++++|.+.+..+..++ ..+++|++|+|++| .+++.+|..+ .++++|++|+|++|.+
T Consensus 27 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 106 (386)
T 2ca6_A 27 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 106 (386)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcC
Confidence 567788999999999998876554432 24899999999996 5566677655 7899999999999999
Q ss_pred Cc----cCccccCCCCCCCEEEccCCCCCCcCchh----hhcC---------cCCCeeecccccCC-CcCc---ccccCC
Q 035786 155 AG----NVPATLGELKKLSNLDLSRNLLTGEIPNA----ISLL---------GNLTRLNLASNFFT-GQIP---SGLYSL 213 (693)
Q Consensus 155 ~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l---------~~L~~L~Ls~N~l~-g~~p---~~~~~l 213 (693)
.+ .+|..+..+++|++|+|++|.+++..+.. +..+ ++|++|+|++|.++ +.+| ..+..+
T Consensus 107 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 186 (386)
T 2ca6_A 107 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 186 (386)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhC
Confidence 97 57888999999999999999997544443 4444 89999999999998 4555 467789
Q ss_pred CCCCEEEccCCccc--c---cCCccccCCCCCCEEEccCCcCc----ccCchhhhcCcccccccccccccccc----CCC
Q 035786 214 SSIQFLNLSDNALT--G---FIPSEVGNLDKLIELDLSKNSIS----GSLPLELRGLRNLAKLVISENGLEGQ----LSE 280 (693)
Q Consensus 214 ~~L~~L~Ls~N~l~--g---~~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~Ls~N~l~g~----i~~ 280 (693)
++|+.|+|++|+++ | .+|..+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ++.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 99999999999998 3 45557889999999999999997 67888999999999999999999865 343
Q ss_pred cc-cCCCCCCCEEEccCCcCCC----cCcccc-cCCCCCCEEEccCCcCcccCC
Q 035786 281 GL-FPTLDQLQVVDLSGNKLDG----ALPATL-FLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 281 ~~-~~~l~~L~~L~Ls~N~l~g----~~p~~l-~~~~~L~~L~Ls~N~l~g~~p 328 (693)
.+ ...+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 32 1337899999999999998 588877 568999999999999987654
No 322
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.7e-24 Score=229.36 Aligned_cols=222 Identities=24% Similarity=0.251 Sum_probs=152.5
Q ss_pred CCCEEEccCCCCCCcCchHhhhCC--CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCcc-CccccCCCCCCCE
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRL--PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGN-VPATLGELKKLSN 170 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l--~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 170 (693)
.++.++++++.+. |..+.. + ++++.|++++|.+.+..+. +.++++|++|+|++|.+++. +|..+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~-~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGR-LLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHH-HHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHh-hhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 3677888877765 344433 5 7888888888888776655 55688888888888887765 7777788888888
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccc-cCCCc-CcccccCCCCCCEEEccCC-ccccc-CCccccCCC-CCCEEEc
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASN-FFTGQ-IPSGLYSLSSIQFLNLSDN-ALTGF-IPSEVGNLD-KLIELDL 245 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~L 245 (693)
|+|++|.+++..|..+..+++|++|++++| .+++. +|..+..+++|++|++++| .+++. ++..+..++ +|++|++
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 888888887777777878888888888888 56652 5666777778888888887 77654 456667777 7777777
Q ss_pred cCC--cCc-ccCchhhhcCcccccccccccc-ccccCCCcccCCCCCCCEEEccCCc-CCCcCcccccCCCCCCEEEccC
Q 035786 246 SKN--SIS-GSLPLELRGLRNLAKLVISENG-LEGQLSEGLFPTLDQLQVVDLSGNK-LDGALPATLFLRPNLRFLDLSR 320 (693)
Q Consensus 246 s~N--~l~-g~~p~~~~~l~~L~~L~Ls~N~-l~g~i~~~~~~~l~~L~~L~Ls~N~-l~g~~p~~l~~~~~L~~L~Ls~ 320 (693)
++| .++ +.+|..+..+++|++|++++|. +++..+.. +..+++|+.|++++|. ++......+..+++|+.|++++
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~-l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~ 281 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQE-FFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFG 281 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGG-GGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTT
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHH-HhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccC
Confidence 777 454 4556666677777777777776 55444443 3556666677776664 2211112455566666666666
Q ss_pred C
Q 035786 321 N 321 (693)
Q Consensus 321 N 321 (693)
|
T Consensus 282 ~ 282 (336)
T 2ast_B 282 I 282 (336)
T ss_dssp S
T ss_pred c
Confidence 5
No 323
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.89 E-value=1.6e-23 Score=219.70 Aligned_cols=164 Identities=18% Similarity=0.186 Sum_probs=131.1
Q ss_pred hCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCC--CCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVS--HARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~~l 585 (693)
.+.|...+.||+|+||.||+|+..+++.||||++...... .+.|.+|++++.+++ |+||+++++++.+ +...++
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~l 105 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYM 105 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-SSEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-CCEEEE
Confidence 3457778899999999999999888999999999654332 467899999999997 5999999999876 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||| +.+|+|.+++... ..+++..+..++.++++||+|||.. +|+||||||+||++++ +.+||+|||+
T Consensus 106 v~e-~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKK--------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp EEC-CCSEEHHHHHHHC--------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred EEe-cCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccc
Confidence 999 5688999999753 2489999999999999999999998 9999999999999974 8999999999
Q ss_pred ccccCCCCc-ceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
++....... .......||+.|+|
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~a 196 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMP 196 (313)
T ss_dssp SCC--------------CCGGGCC
T ss_pred cccccCccccccccCCCCCCCcCC
Confidence 988743221 11233456666665
No 324
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=8.5e-25 Score=234.52 Aligned_cols=255 Identities=20% Similarity=0.189 Sum_probs=203.4
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCc----cccCCCC-CCCEEEccCCCCCCcCchhhhcC-----cC
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVP----ATLGELK-KLSNLDLSRNLLTGEIPNAISLL-----GN 191 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 191 (693)
+++|+.|.++|.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999999988888889999999999998777 7788898 99999999999998888888775 99
Q ss_pred CCeeecccccCCCcCccccc----CC-CCCCEEEccCCcccccCCcccc----C-CCCCCEEEccCCcCcccC----chh
Q 035786 192 LTRLNLASNFFTGQIPSGLY----SL-SSIQFLNLSDNALTGFIPSEVG----N-LDKLIELDLSKNSISGSL----PLE 257 (693)
Q Consensus 192 L~~L~Ls~N~l~g~~p~~~~----~l-~~L~~L~Ls~N~l~g~~p~~~~----~-l~~L~~L~Ls~N~l~g~~----p~~ 257 (693)
|++|+|++|.+++..+..+. .+ ++|+.|+|++|++++..+..+. . .++|++|+|++|.+++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999987776444 44 8999999999999887665543 3 369999999999999644 444
Q ss_pred hhcCc-cccccccccccccccCCCcc---cCCC-CCCCEEEccCCcCCCc----CcccccC-CCCCCEEEccCCcCcccC
Q 035786 258 LRGLR-NLAKLVISENGLEGQLSEGL---FPTL-DQLQVVDLSGNKLDGA----LPATLFL-RPNLRFLDLSRNNITGSW 327 (693)
Q Consensus 258 ~~~l~-~L~~L~Ls~N~l~g~i~~~~---~~~l-~~L~~L~Ls~N~l~g~----~p~~l~~-~~~L~~L~Ls~N~l~g~~ 327 (693)
+..++ +|++|+|++|++++..+..+ +... ++|+.|+|++|.+++. ++..+.. .++|+.|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 56665 99999999999986554321 2344 5999999999999873 4555655 469999999999998643
Q ss_pred C---ccCcCCCCCCcEEEccCCccceecC-------C--CCCCCCCEEEccCCcceeecCC
Q 035786 328 P---ILSTNGNASGAVFNISNNMLYGDLN-------S--SSFRKFSLIDLSSNYFQGTVAD 376 (693)
Q Consensus 328 p---~~~~~~~~~l~~l~ls~N~l~g~~~-------~--~~~~~l~~ldLs~N~l~g~ip~ 376 (693)
+ ......+..|+.|++++|.+.+..+ . ..+++|+.||+++|.+.+..|.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 3 1234667889999999999543211 1 3567788999999998876544
No 325
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.89 E-value=1.2e-23 Score=221.65 Aligned_cols=163 Identities=20% Similarity=0.243 Sum_probs=135.8
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-------CHHHHHHHHHHHhcCC--CCCccceeEEEEcCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-------KKESYMMELDLFSRVS--HARLVPLLGQCLEHE 580 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~--H~niv~l~g~~~~~~ 580 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++.+++ |+||+++++++.+ +
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~-~ 120 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-P 120 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-S
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec-C
Confidence 34577888999999999999985 5789999999965432 1246788999999996 5999999999875 4
Q ss_pred CeeEEEEccCCC-CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCce
Q 035786 581 TEKLLVYKYMVC-GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEV 658 (693)
Q Consensus 581 ~~~~lv~ey~~~-GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ 658 (693)
+..++|+||+.+ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 189 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER--------GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGEL 189 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH--------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEE
T ss_pred CcEEEEEEcCCCCccHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCE
Confidence 678999999986 9999999753 2489999999999999999999998 999999999999999 78999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++...+.. .....||+.|+|
T Consensus 190 kL~Dfg~~~~~~~~~---~~~~~gt~~y~a 216 (320)
T 3a99_A 190 KLIDFGSGALLKDTV---YTDFDGTRVYSP 216 (320)
T ss_dssp EECCCTTCEECCSSC---BCCCCSCGGGSC
T ss_pred EEeeCcccccccccc---ccCCCCCccCCC
Confidence 999999999875432 223456666665
No 326
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.89 E-value=2.7e-23 Score=219.40 Aligned_cols=168 Identities=20% Similarity=0.235 Sum_probs=123.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHH-HHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELD-LFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|... +|+.||||++...... .+++.+|+. +++.++|||||++++++.+ ++..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-CCceEEEE
Confidence 45677889999999999999974 6899999999754322 345666766 7788899999999999886 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++ +|.+++..... .....+++..+.+++.+++.||.|||+. ++|+||||||+||++++++.+||+|||+++
T Consensus 101 e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYS---VLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp CCCSE-EHHHHHHHHHH---TTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred eecCC-ChHHHHHHHHh---hhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 99985 88888763110 0114589999999999999999999974 279999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .+...||+.|+|
T Consensus 175 ~~~~~~~--~~~~~gt~~y~a 193 (327)
T 3aln_A 175 QLVDSIA--KTRDAGCRPYMA 193 (327)
T ss_dssp C--------------------
T ss_pred ecccccc--cccCCCCccccC
Confidence 8743322 223356666665
No 327
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.89 E-value=3.4e-23 Score=214.52 Aligned_cols=142 Identities=11% Similarity=0.051 Sum_probs=123.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+.|...+.||+|+||.||+|+.. +|+.||||.+...... .+.|.+|++++.+++|||||++++++.+ ++..++|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-RAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-CCcEEEE
Confidence 34777889999999999999975 5899999999764432 3679999999999999999999999876 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++.. ....+..+|+.|++.||+|||+. +|+||||||+|||+++++.+||+++|..
T Consensus 110 ~e~~~g~~L~~~l~~~----------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~ 176 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS----------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM 176 (286)
T ss_dssp EECCCEEEHHHHHTTC----------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC
T ss_pred EEecCCCCHHHHHhcC----------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc
Confidence 9999999999998531 34556888999999999999998 9999999999999999999999988764
Q ss_pred c
Q 035786 667 H 667 (693)
Q Consensus 667 ~ 667 (693)
.
T Consensus 177 ~ 177 (286)
T 3uqc_A 177 P 177 (286)
T ss_dssp T
T ss_pred C
Confidence 4
No 328
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.89 E-value=1e-23 Score=231.75 Aligned_cols=166 Identities=14% Similarity=0.206 Sum_probs=121.8
Q ss_pred CccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 515 SETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
...++||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+ +...++||||+. |
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~lv~E~~~-g 93 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETT-DRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECCCS-E
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEec-CCeEEEEEecCC-C
Confidence 3457899999999987766679999999986432 45688999999886 89999999998865 467899999995 7
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-------------CCceEE
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-------------KFEVRL 660 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-------------~~~~ki 660 (693)
+|.+++....... ......++..+..|+.||+.||+|||+. +|+||||||+|||++. ++.+||
T Consensus 94 sL~~~l~~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 94 NLQDLVESKNVSD-ENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EHHHHHHTC-------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CHHHHHhccCCCc-hhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 9999997643211 0011124445678999999999999998 9999999999999965 458999
Q ss_pred CCcccccccCCCCcc---eeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
+|||+++........ ..+...||++|+|
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~a 200 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRA 200 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSC
T ss_pred cccccceecCCCCccceeeecCCCCCCCccC
Confidence 999999987543221 1234567777776
No 329
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.89 E-value=6.5e-24 Score=222.49 Aligned_cols=164 Identities=20% Similarity=0.232 Sum_probs=130.5
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-------CHHHHHHHHHHHhcC----CCCCccceeEEEE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-------KKESYMMELDLFSRV----SHARLVPLLGQCL 577 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l----~H~niv~l~g~~~ 577 (693)
..++|...+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++++.++ +|+||+++++++.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 345688899999999999999986 5689999999965432 123567799999998 8999999999886
Q ss_pred cCCCeeEEEEcc-CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CC
Q 035786 578 EHETEKLLVYKY-MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DK 655 (693)
Q Consensus 578 ~~~~~~~lv~ey-~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~ 655 (693)
+ ++..++|+|| +++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++ ++
T Consensus 109 ~-~~~~~~v~e~~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 176 (312)
T 2iwi_A 109 T-QEGFMLVLERPLPAQDLFDYITEKG--------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRR 176 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTT
T ss_pred c-CCeEEEEEEecCCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCC
Confidence 5 4578999999 89999999997632 489999999999999999999998 999999999999999 88
Q ss_pred CceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 656 FEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 656 ~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.+||+|||+++...... .....|++.|+|
T Consensus 177 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~a 206 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDEP---YTDFDGTRVYSP 206 (312)
T ss_dssp TEEEECCCSSCEECCSSC---BCCCCSCTTTSC
T ss_pred CeEEEEEcchhhhcccCc---ccccCCcccccC
Confidence 999999999999874432 123445555554
No 330
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.89 E-value=3.3e-23 Score=223.75 Aligned_cols=165 Identities=18% Similarity=0.244 Sum_probs=134.1
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCC-----ccceeEEEEcCCCee
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HAR-----LVPLLGQCLEHETEK 583 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~n-----iv~l~g~~~~~~~~~ 583 (693)
.++|...+.||+|+||.||+|+.. +++.||||++.......+++.+|++++..++ |++ ||++.+++.. ++..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-TTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-CCce
Confidence 456888899999999999999864 6889999999754434567888999998885 553 9999998876 4689
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC--CCCceEEC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD--DKFEVRLG 661 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld--~~~~~ki~ 661 (693)
++||||++ |+|.+++..... ..+++..+..++.|++.||+|||.+ ..+||||||||+|||++ .++.+||+
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNF------RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTT------SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred EEEEecCC-CCHHHHHhhcCc------CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 99999996 599999976432 3489999999999999999999953 23899999999999994 57889999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++..+... ....||++|+|
T Consensus 204 DFG~a~~~~~~~----~~~~~t~~y~a 226 (382)
T 2vx3_A 204 DFGSSCQLGQRI----YQYIQSRFYRS 226 (382)
T ss_dssp CCTTCEETTCCC----CSSCSCGGGCC
T ss_pred eccCceeccccc----ccccCCccccC
Confidence 999999875432 22456666665
No 331
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.89 E-value=9.1e-24 Score=231.64 Aligned_cols=163 Identities=13% Similarity=0.169 Sum_probs=125.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
..|...++||+|+||.||.....+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+ +...++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKD-RQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEec-CCEEEEEEECC
Confidence 3477788999999999665555678999999996532 23467899999999 89999999998875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-----CCCceEECCccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-----DKFEVRLGSLSE 665 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-----~~~~~ki~Dfgl 665 (693)
+ |+|.+++..... ...+.+...++.||++||+|||+. +|+||||||+|||++ ....+||+|||+
T Consensus 101 ~-g~L~~~l~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 101 A-ATLQEYVEQKDF-------AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp S-EEHHHHHHSSSC-------CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred C-CCHHHHHHhcCC-------CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 7 699999975432 234445678999999999999998 899999999999994 334688999999
Q ss_pred ccccCCCC--cceeeeeehhhhhhh
Q 035786 666 LHAQGDSH--QNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~--~~~~~~~~~~~~y~a 688 (693)
++...... ....+..+||++|+|
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~A 194 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIA 194 (432)
T ss_dssp EECC------------CCSCTTSCC
T ss_pred eeeccCCCcceeeccccCCCcCccC
Confidence 99874322 122344678888876
No 332
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.89 E-value=3.4e-23 Score=219.70 Aligned_cols=162 Identities=15% Similarity=0.222 Sum_probs=118.5
Q ss_pred CCCCc-cCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcC---CCeeEEE
Q 035786 512 GNFSE-TNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH---ETEKLLV 586 (693)
Q Consensus 512 ~~~~~-~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---~~~~~lv 586 (693)
++|.. .++||+|+||.||+|+.. +|+.||||++.......+ +....+..++||||+++++++... +...++|
T Consensus 28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 45666 457999999999999975 689999999865322122 222345667999999999988541 2347899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSL 663 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Df 663 (693)
|||+++|+|.+++..... ..+++.++..++.+++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 105 ~e~~~gg~L~~~l~~~~~------~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 105 MECMEGGELFSRIQERGD------QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EECCTTEEHHHHHHTC-C------CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EeccCCCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 999999999999985432 3599999999999999999999998 9999999999999986 456999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++...... .....+|+.|+|
T Consensus 176 g~~~~~~~~~---~~~~~~t~~y~a 197 (336)
T 3fhr_A 176 GFAKETTQNA---LQTPCYTPYYVA 197 (336)
T ss_dssp TTCEEC-------------------
T ss_pred ccceeccccc---cccCCCCcCccC
Confidence 9998764322 223456666665
No 333
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.88 E-value=6.3e-23 Score=213.80 Aligned_cols=147 Identities=17% Similarity=0.224 Sum_probs=125.5
Q ss_pred CCCcc-CccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHH-hcCCCCCccceeEEEEc---CCCeeEEE
Q 035786 513 NFSET-NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLF-SRVSHARLVPLLGQCLE---HETEKLLV 586 (693)
Q Consensus 513 ~~~~~-~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l-~~l~H~niv~l~g~~~~---~~~~~~lv 586 (693)
+|... ++||+|+||.||+|.. .+++.||||++.. .+.+.+|++++ ...+||||+++++++.. .+...++|
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 93 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 93 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence 34444 6799999999999986 5689999999863 34578899988 66699999999998754 13467899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSL 663 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Df 663 (693)
|||+++|+|.+++..... ..+++.++..++.+++.||+|||.. +|+||||||+||+++. ++.+||+||
T Consensus 94 ~e~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 94 MECLDGGELFSRIQDRGD------QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp ECCCCSCBHHHHHHHCTT------CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EeecCCCcHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 999999999999986432 3599999999999999999999998 9999999999999998 789999999
Q ss_pred ccccccCCC
Q 035786 664 SELHAQGDS 672 (693)
Q Consensus 664 gla~~~~~~ 672 (693)
|+++.....
T Consensus 165 g~a~~~~~~ 173 (299)
T 3m2w_A 165 GFAKETTGE 173 (299)
T ss_dssp TTCEECTTC
T ss_pred ccccccccc
Confidence 999887543
No 334
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88 E-value=1.6e-23 Score=235.77 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=116.9
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---------KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
..++||+|+||.||+|+.. +..+|+|+....... .+.|.+|++++.+++|||||++..++.. ++..++|
T Consensus 340 ~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-~~~~~lV 417 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-LDNKRIM 417 (540)
T ss_dssp --------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-TTTTEEE
T ss_pred CCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-CCccEEE
Confidence 4578999999999999654 678999986432211 2458999999999999999977777765 3567999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++. +.+|+.|+++||+|||+. +|+||||||+|||+++ ++||+|||++
T Consensus 418 mE~~~ggsL~~~l~~----------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla 476 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLG 476 (540)
T ss_dssp EECCCSEEHHHHSTT----------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTC
T ss_pred EECCCCCCHHHHHHH----------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccC
Confidence 999999999999863 347999999999999998 9999999999999998 9999999999
Q ss_pred cccCCCCcce------eeeeehhhhhhh
Q 035786 667 HAQGDSHQNV------LTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~------~~~~~~~~~y~a 688 (693)
+......... ...++||++|||
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~GT~~y~A 504 (540)
T 3en9_A 477 KISNLDEDKAVDLIVFKKAVLSTHHEKF 504 (540)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred EECCCccccccchhhhhhhhcCCCCcCC
Confidence 9985432211 235678999887
No 335
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.2e-22 Score=198.03 Aligned_cols=159 Identities=25% Similarity=0.249 Sum_probs=109.7
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
.++|++|+|++|.+++..+..|+++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..+..+++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 34567777777777765555667777777777777777755555667777777777777777755555566777777777
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.+++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|.+.+. +++|+.|+++.|+++|
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSG 179 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTT
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCc
Confidence 777777765555567777777777777777766555677777777777777766543 3466777777777777
Q ss_pred cCCCcc
Q 035786 277 QLSEGL 282 (693)
Q Consensus 277 ~i~~~~ 282 (693)
.+|..+
T Consensus 180 ~ip~~~ 185 (208)
T 2o6s_A 180 VVRNSA 185 (208)
T ss_dssp TBBCTT
T ss_pred eeeccC
Confidence 766543
No 336
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.88 E-value=4.7e-23 Score=219.51 Aligned_cols=162 Identities=13% Similarity=0.190 Sum_probs=133.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-C-CcEEEEEEecccccCHHHHHHHHHHHhcCCCCC------ccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-G-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR------LVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~-g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n------iv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|... + ++.||||.+.......+.+.+|++++.+++|++ ++.+.+++.. ....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-HGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-TTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-CCeE
Confidence 45778889999999999999863 3 478999999765444677899999999998776 8899888765 4688
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee-----------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----------- 652 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----------- 652 (693)
++||||+ +|++.+++..... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~------~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNF------QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred EEEEecc-CCChHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 9999999 6777777765321 3589999999999999999999988 99999999999999
Q ss_pred --------CCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 653 --------DDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 653 --------d~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.++.+||+|||+++....... ...||+.|+|
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~gt~~y~a 207 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEHHT----TIVATRHYRP 207 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSCCC----SSCSCGGGCC
T ss_pred cccccccccCCCcEEEeecCcccccccccc----CCcCCCcccC
Confidence 6788999999999987643322 2456777765
No 337
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=5.5e-22 Score=201.28 Aligned_cols=179 Identities=26% Similarity=0.248 Sum_probs=109.7
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
..++++++++.++ .+|..+. ++|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..+..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4567778777776 4555554 467777777777777666677777777777777777776666666666667777766
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l----------------- 154 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL----------------- 154 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC-----------------
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcC-----------------
Confidence 666665555556666666666666666665555455556666666666666554444344444
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcc
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g 325 (693)
++|+.|+|++|++++..+..+..+++|+.|+|++|.+++
T Consensus 155 --------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 155 --------TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp --------TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred --------cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 444444444444444444444445555555555555544
No 338
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.88 E-value=2.8e-23 Score=223.23 Aligned_cols=164 Identities=17% Similarity=0.318 Sum_probs=134.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-----------CCCccceeEEEEcC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-----------HARLVPLLGQCLEH 579 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-----------H~niv~l~g~~~~~ 579 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.......+.+.+|++++.+++ |+||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 3577788999999999999996 57899999999765445677899999999887 89999999998743
Q ss_pred C---CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---
Q 035786 580 E---TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD--- 653 (693)
Q Consensus 580 ~---~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld--- 653 (693)
+ ...++||||+ +|+|.+++..... ..+++..+..|+.|++.||+|||+.+ +|+||||||+|||++
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~------~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEH------RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTT------SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhc------cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 2 1578999999 8999999976432 34899999999999999999999853 799999999999994
Q ss_pred ---CCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 654 ---DKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 654 ---~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.++.+||+|||+++....... ...+|+.|+|
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~t~~y~a 203 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEHYT----NSIQTREYRS 203 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBCCC----SCCSCGGGCC
T ss_pred CCcCcceEEEcccccccccCCCCC----CCCCCccccC
Confidence 455899999999988744322 2456777765
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.3e-22 Score=210.51 Aligned_cols=192 Identities=29% Similarity=0.395 Sum_probs=111.7
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|++++|.++. +| .+..+++|++|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 5556666666666553 33 35556666666666666654332 5666666666666666654 22 455566666666
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.+++ +|. +..+++|+.|++++|++++..+ ++.+++|++|++++|.+++..+ +..+++|++|++++|.+++
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 66666654 222 5566666666666666654322 5566666666666666654332 5566666666666666654
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcc
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g 325 (693)
..+ +..+++|+.|++++|++++..| +..+++|+.|+|++|++++
T Consensus 188 ~~~---l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP---LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG---GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh---hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 322 3556666666666666665442 5666667777777776653
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.8e-22 Score=209.88 Aligned_cols=197 Identities=26% Similarity=0.405 Sum_probs=162.7
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
....++.|+.|+++++.+.. +| .+. .+++|++|+|++|.+++..+ +.++++|++|+|++|.+++. | .+..+++
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-l~-~~~-~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~ 108 (308)
T 1h6u_A 36 TQADLDGITTLSAFGTGVTT-IE-GVQ-YLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQS 108 (308)
T ss_dssp CHHHHHTCCEEECTTSCCCC-CT-TGG-GCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTT
T ss_pred cHHHcCCcCEEEeeCCCccC-ch-hhh-ccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCC
Confidence 34567788899999888764 55 454 48999999999999986544 88999999999999998863 3 6888999
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|++|+|++|.+++ +|. +..+++|++|++++|.+++..+ +..+++|+.|++++|++++.. . +..+++|+.|++++
T Consensus 109 L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~-~-l~~l~~L~~L~l~~ 182 (308)
T 1h6u_A 109 IKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLT-P-LANLSKLTTLKADD 182 (308)
T ss_dssp CCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCS
T ss_pred CCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCCh-h-hcCCCCCCEEECCC
Confidence 9999999999986 443 8889999999999999986543 888999999999999998643 3 88999999999999
Q ss_pred CcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCc
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGA 302 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~ 302 (693)
|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++.
T Consensus 183 n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~---l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 183 NKISDISP--LASLPNLIEVHLKNNQISDVSP---LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp SCCCCCGG--GGGCTTCCEEECTTSCCCBCGG---GTTCTTCCEEEEEEEEEECC
T ss_pred CccCcChh--hcCCCCCCEEEccCCccCcccc---ccCCCCCCEEEccCCeeecC
Confidence 99986544 8889999999999999986543 57889999999999999763
No 341
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.88 E-value=2.2e-23 Score=236.67 Aligned_cols=167 Identities=19% Similarity=0.273 Sum_probs=135.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEc-----CCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLE-----HETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~-----~~~~~ 583 (693)
++|...+.||+|+||.||+|.. .+|+.||||++..... ..+.|.+|++++.+++|||||++++++.. .++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 4688899999999999999986 4689999999865322 25679999999999999999999998643 13467
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---eEE
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---VRL 660 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ki 660 (693)
++||||+++|+|.+++..... ...+++..+..|+.+++.||+|||+. +|+||||||+||+++.++. +||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~-----~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL 165 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFEN-----CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKI 165 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSC-----TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred EEEEEeCCCCCHHHHHHhccc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEE
Confidence 899999999999999985332 13588999999999999999999998 9999999999999997654 999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++....... .+...||+.|+|
T Consensus 166 ~DFG~a~~~~~~~~--~~~~~gt~~Y~A 191 (676)
T 3qa8_A 166 IDLGYAKELDQGEL--CTEFVGTLQYLA 191 (676)
T ss_dssp CSCCCCCBTTSCCC--CCCCCSCCTTCS
T ss_pred cccccccccccccc--cccccCCcccCC
Confidence 99999998744332 233567777765
No 342
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.88 E-value=9e-23 Score=214.07 Aligned_cols=148 Identities=19% Similarity=0.261 Sum_probs=112.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.++..++..++||||+++++++.+ ++..++||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~ 103 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-NTDVFIAM 103 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-CCcEEEEE
Confidence 45777889999999999999975 6899999999754332 2334455567888899999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+ ++.+..+..... ..+++..+..++.++++||+|||+.+ +|+||||||+||+++.++.+||+|||+++
T Consensus 104 e~~-~~~~~~l~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 173 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ-------GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISG 173 (318)
T ss_dssp CCC-SEEHHHHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred ecc-CCcHHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCch
Confidence 999 445554443321 35899999999999999999999721 79999999999999999999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
...
T Consensus 174 ~~~ 176 (318)
T 2dyl_A 174 RLV 176 (318)
T ss_dssp ---
T ss_pred hcc
Confidence 763
No 343
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=2.5e-22 Score=226.13 Aligned_cols=158 Identities=29% Similarity=0.464 Sum_probs=97.1
Q ss_pred CCCCCCCCCC----CCcce-eecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCC
Q 035786 43 DWPLRTEPCR----SWRGV-QCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRL 117 (693)
Q Consensus 43 ~W~~~~~~C~----~W~gv-~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l 117 (693)
+|..+.++|. .|.|+ .|..++++.|+|+ +|.+.+ +|..+ +
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls-------------------------------~n~L~~-lp~~l---~ 79 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLINQFSELQLN-------------------------------RLNLSS-LPDNL---P 79 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECC-------------------------------SSCCSC-CCSCC---C
T ss_pred HHhccCCccccccchhhhccccccCCccEEEeC-------------------------------CCCCCc-cCHhH---c
Confidence 5755566773 48898 6754445555444 444444 55443 3
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|++|+|++|.|+ .+| +.+++|++|+|++|.|++ +|. +.+ +|++|+|++|.+++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 56777777777766 455 345667777777777765 555 444 67777777777665 554 4566666777
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCch
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL 256 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 256 (693)
++|.+++ +|. .+++|+.|+|++|++++ +|. |. ++|+.|+|++|+|+ .+|.
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh
Confidence 7666664 454 45666777777777665 555 44 66666666666666 3443
No 344
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.86 E-value=2e-22 Score=234.88 Aligned_cols=262 Identities=21% Similarity=0.196 Sum_probs=134.2
Q ss_pred CHHHHHHHHHHHHhCCC----CCCCCCCCCCCCCCCcceeecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEE
Q 035786 23 SAVQRSALLDLRSSLGL----RSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSF 98 (693)
Q Consensus 23 ~~~~~~aLl~~k~~l~~----~~~~W~~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L 98 (693)
.+.++++|+++..+... ....|.....+++.|.+++++.++++.++|.+.... .. ....|+.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~---~~----------~~~~l~~l 196 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKD---EA----------NQALLQHK 196 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCC---cc----------hhhHhhcC
Confidence 45678999999987731 224565444556689999998888998888653311 11 11223444
Q ss_pred EccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCC
Q 035786 99 NASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLL 178 (693)
Q Consensus 99 ~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 178 (693)
+|+.+.+ ..++++.|.+. ..|..|..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|
T Consensus 197 ~Ls~~~i---------------~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l 259 (727)
T 4b8c_D 197 KLSQYSI---------------DEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSL 259 (727)
T ss_dssp -----------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCC
T ss_pred ccCcccc---------------cCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcC
Confidence 4444332 23455556555 56778889999999999999988 6777777899999999999999
Q ss_pred CCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhh
Q 035786 179 TGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLEL 258 (693)
Q Consensus 179 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 258 (693)
+ .+|..|..+++|++|+|++|.|+ .+|..++.+++|++|+|++|.++ .+|..|+++++|++|+|++|.|++.+|..+
T Consensus 260 ~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 260 T-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp S-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred c-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 8 88999999999999999999998 78999999999999999999997 778889999999999999999999999888
Q ss_pred hcCcc-ccccccccccccccCCCcccCCCCCCCEEEccCC--------cCCCcCcccccCCCCCCEEEccCCcCc
Q 035786 259 RGLRN-LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGN--------KLDGALPATLFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 259 ~~l~~-L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N--------~l~g~~p~~l~~~~~L~~L~Ls~N~l~ 324 (693)
..+.. +..|+|++|.++|.+|. .|..|+++.| .+.+..+..+..+..+....+++|-+.
T Consensus 337 ~~~~~~~~~l~l~~N~l~~~~p~-------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 337 TEKSVTGLIFYLRDNRPEIPLPH-------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCCC-------C-----------------------------------------CCC
T ss_pred hhcchhhhHHhhccCcccCcCcc-------ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 66533 33578999999887765 3556677766 233333333334444455555555554
No 345
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=2.5e-21 Score=190.49 Aligned_cols=181 Identities=22% Similarity=0.200 Sum_probs=145.3
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45677777776 345444 458899999999998777777888999999999999998766667788899999999999
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCC
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSE 280 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~ 280 (693)
.+++..+..+..+++|++|++++|++++..+..|.++++|++|++++|++++..+..+..+++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 9887666667888999999999999987777778888899999999998887777678888888888888887653
Q ss_pred cccCCCCCCCEEEccCCcCCCcCcccccCCCC
Q 035786 281 GLFPTLDQLQVVDLSGNKLDGALPATLFLRPN 312 (693)
Q Consensus 281 ~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~ 312 (693)
.+++|+.|+++.|+++|.+|.+++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456788888888888888887765543
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.8e-21 Score=217.61 Aligned_cols=182 Identities=24% Similarity=0.364 Sum_probs=147.7
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
+|+.|+|++|.+++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|++|.+++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999987 777663 78999999999998 667 457889999999999987 777 554 89999999
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++ +|. .+++|+.|+|++|++++ +|. .+++|++|+|++|++++ +|. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999987 666 67889999999999986 665 57889999999999987 666 65 88999999999888 66
Q ss_pred CCcccCCCCCC-------CEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 279 SEGLFPTLDQL-------QVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 279 ~~~~~~~l~~L-------~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
|. + .. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|.
T Consensus 196 p~-~-~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 196 PA-V-PV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CC-C-C----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred hh-H-HH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 66 3 33 56 88888888888 4777777788888888888888887774
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=5.3e-21 Score=203.92 Aligned_cols=228 Identities=18% Similarity=0.116 Sum_probs=147.9
Q ss_pred cCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCcc-ccCCCCCCCE-EEccCCCCCCcCchh
Q 035786 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPA-TLGELKKLSN-LDLSRNLLTGEIPNA 185 (693)
Q Consensus 108 ~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~Ls~N~l~~~~p~~ 185 (693)
.||..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|++ ++++.|+++...|..
T Consensus 23 ~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~ 99 (350)
T 4ay9_X 23 EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEA 99 (350)
T ss_dssp SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTS
T ss_pred ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchh
Confidence 455543 35688888888888865556788888888888888887666554 5777877665 556678887766777
Q ss_pred hhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccC-CcccccCCccccCCC-CCCEEEccCCcCcccCchhhhcCcc
Q 035786 186 ISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD-NALTGFIPSEVGNLD-KLIELDLSKNSISGSLPLELRGLRN 263 (693)
Q Consensus 186 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~ 263 (693)
|..+++|++|++++|.+++..+..+....++..|++.+ |++....+..|..+. .++.|++++|+++.. |.......+
T Consensus 100 f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~ 178 (350)
T 4ay9_X 100 FQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQ 178 (350)
T ss_dssp BCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEE
T ss_pred hhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC-Chhhccccc
Confidence 88888888888888888766555666666777777755 456555555566654 577788888888743 333334567
Q ss_pred ccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEc
Q 035786 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNI 343 (693)
Q Consensus 264 L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~l 343 (693)
|++|++++|+..+.+|...|..+++|+.|++++|+|+...+.. +.+|+.|.+.+++--..+|. ...+.+|+.+++
T Consensus 179 L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~lP~--l~~l~~L~~l~l 253 (350)
T 4ay9_X 179 LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKKLPT--LEKLVALMEASL 253 (350)
T ss_dssp EEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCCCCC--TTTCCSCCEEEC
T ss_pred hhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCcCCC--chhCcChhhCcC
Confidence 7777776544444677766777777777777777777543333 34455555444432234442 233334444444
Q ss_pred c
Q 035786 344 S 344 (693)
Q Consensus 344 s 344 (693)
+
T Consensus 254 ~ 254 (350)
T 4ay9_X 254 T 254 (350)
T ss_dssp S
T ss_pred C
Confidence 3
No 348
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=2.1e-21 Score=200.37 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=113.2
Q ss_pred HHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc-------------------CHHHHHHHHHHHhcCCC
Q 035786 506 QLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF-------------------KKESYMMELDLFSRVSH 566 (693)
Q Consensus 506 ~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~-------------------~~~~f~~Ei~~l~~l~H 566 (693)
.+......|...+.||+|+||.||+|+..+|+.||||.+..... ..+.|.+|++++.+++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444445666789999999999999997799999999864321 1346899999999999
Q ss_pred CCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCC
Q 035786 567 ARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQ 646 (693)
Q Consensus 567 ~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk 646 (693)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.+++.||+|||.. +|+|||||
T Consensus 163 -~-~~v~~~~~~--~~~~lvmE~~~g~~L~~-l~~--------------~~~~~i~~qi~~~l~~lH~~---giiHrDlk 220 (282)
T 1zar_A 163 -G-LAVPKVYAW--EGNAVLMELIDAKELYR-VRV--------------ENPDEVLDMILEEVAKFYHR---GIVHGDLS 220 (282)
T ss_dssp -T-SSSCCEEEE--ETTEEEEECCCCEEGGG-CCC--------------SCHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred -C-CCcCeEEec--cceEEEEEecCCCcHHH-cch--------------hhHHHHHHHHHHHHHHHHHC---CCEeCCCC
Confidence 4 666664432 45699999999999998 421 11346999999999999988 99999999
Q ss_pred CCCeeeCCCCceEECCcccccccC
Q 035786 647 ASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 647 ~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|||++ ++.+||+|||+++...
T Consensus 221 p~NILl~-~~~vkl~DFG~a~~~~ 243 (282)
T 1zar_A 221 QYNVLVS-EEGIWIIDFPQSVEVG 243 (282)
T ss_dssp TTSEEEE-TTEEEECCCTTCEETT
T ss_pred HHHEEEE-CCcEEEEECCCCeECC
Confidence 9999999 9999999999998753
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=1.4e-20 Score=200.69 Aligned_cols=242 Identities=18% Similarity=0.179 Sum_probs=192.5
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCch-hhhcCcCCCe-eecc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPN-AISLLGNLTR-LNLA 198 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~Ls 198 (693)
+.++.++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|.. +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56788889988 678766 36899999999999976667899999999999999999877764 6788888775 6677
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC-CcCcccCchhhhcCc-cccccccccccccc
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK-NSISGSLPLELRGLR-NLAKLVISENGLEG 276 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g 276 (693)
.|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 8999988888999999999999999999987777777788888999976 567766666777765 5889999999998
Q ss_pred cCCCcccCCCCCCCEEEccC-CcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC-
Q 035786 277 QLSEGLFPTLDQLQVVDLSG-NKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS- 354 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~-N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~- 354 (693)
.++...|. ..+|+.+++++ |.++...+..|..+++|++|||++|+|+ .+|.. .+..|+.|.+.++.--..+|.
T Consensus 168 ~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~---~~~~L~~L~~l~~~~l~~lP~l 242 (350)
T 4ay9_X 168 EIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSY---GLENLKKLRARSTYNLKKLPTL 242 (350)
T ss_dssp EECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSS---SCTTCCEEECTTCTTCCCCCCT
T ss_pred CCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChh---hhccchHhhhccCCCcCcCCCc
Confidence 56766654 46899999975 6666554556788999999999999998 56643 355677777665544445665
Q ss_pred CCCCCCCEEEccCCcce
Q 035786 355 SSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 355 ~~~~~l~~ldLs~N~l~ 371 (693)
..+++|+.++++++...
T Consensus 243 ~~l~~L~~l~l~~~~~c 259 (350)
T 4ay9_X 243 EKLVALMEASLTYPSHC 259 (350)
T ss_dssp TTCCSCCEEECSCHHHH
T ss_pred hhCcChhhCcCCCCccc
Confidence 67889999999876644
No 350
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.84 E-value=1.1e-21 Score=214.17 Aligned_cols=156 Identities=18% Similarity=0.184 Sum_probs=115.3
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCC-CCc----------cceeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSH-ARL----------VPLLGQ 575 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H-~ni----------v~l~g~ 575 (693)
..|...++||+|+||.||+|+. .+|+.||||++..... ..+.|.+|+.++..++| +|. +.+...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 3466778999999999999995 5799999999873222 24679999999999988 322 111111
Q ss_pred -----------EEcC----CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCe
Q 035786 576 -----------CLEH----ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPL 640 (693)
Q Consensus 576 -----------~~~~----~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~i 640 (693)
+... ....+++|+++ +|+|.++++..... ......++|..++.|+.|+++||+|||+. +|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~-~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH-SSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHH-TTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcc-cccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1100 11245666655 68999998521100 00124588999999999999999999998 99
Q ss_pred EecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 641 VHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 641 iHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
|||||||+|||++.++.+||+|||+++..+..
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~ 264 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS 264 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc
Confidence 99999999999999999999999999886443
No 351
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.83 E-value=1e-22 Score=232.68 Aligned_cols=281 Identities=10% Similarity=0.065 Sum_probs=130.6
Q ss_pred cCCCCCEEEccCCCCCCc----CchHhhhCCCCccEEEecCCCCC----cCCCcccCCCccCCEEecccCcCCccCcccc
Q 035786 91 NLTLLSSFNASGLSLPGS----IPEWFGYRLPALQVLDLRSCSLS----GSIPGSFGNLSRLNVLYLSGNSLAGNVPATL 162 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~----ip~~~~~~l~~L~~L~Ls~n~l~----g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 162 (693)
++++|+.|++++|.+.+. ++..+. .+++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..+
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~-~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~ 239 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQ-HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFF 239 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHH-HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHh-cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHH
Confidence 445556666665554433 222222 2555666666655554 2233334455556666666555543 33344
Q ss_pred CCCCCCCEEEccCCCC--------------------------CCcCchhhhcCcCCCeeecccccCCCcCc-ccccCCCC
Q 035786 163 GELKKLSNLDLSRNLL--------------------------TGEIPNAISLLGNLTRLNLASNFFTGQIP-SGLYSLSS 215 (693)
Q Consensus 163 ~~l~~L~~L~Ls~N~l--------------------------~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~ 215 (693)
.++++|++|+++.+.. .+.+|..+..+++|++|+|++|.+++... ..+..+++
T Consensus 240 ~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~ 319 (592)
T 3ogk_B 240 KAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPN 319 (592)
T ss_dssp HHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTT
T ss_pred hhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcC
Confidence 4444444444432111 12233334444445555555444432221 22344444
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEEcc-----------CCcCccc-CchhhhcCccccccccccccccccCCCccc
Q 035786 216 IQFLNLSDNALTGFIPSEVGNLDKLIELDLS-----------KNSISGS-LPLELRGLRNLAKLVISENGLEGQLSEGLF 283 (693)
Q Consensus 216 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls-----------~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~ 283 (693)
|+.|+++++...+.++..+..+++|++|+++ .|.+++. ++.....+++|++|+++.|.+++..+..+.
T Consensus 320 L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~ 399 (592)
T 3ogk_B 320 LEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIG 399 (592)
T ss_dssp CCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHH
T ss_pred CCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHH
Confidence 4444444221111222222344555555555 2344332 122233455555555555555544333322
Q ss_pred CCCCCCCEEEcc----CCcCCCc-----CcccccCCCCCCEEEccCC--cCcccCCccCcCCCCCCcEEEccCCcccee-
Q 035786 284 PTLDQLQVVDLS----GNKLDGA-----LPATLFLRPNLRFLDLSRN--NITGSWPILSTNGNASGAVFNISNNMLYGD- 351 (693)
Q Consensus 284 ~~l~~L~~L~Ls----~N~l~g~-----~p~~l~~~~~L~~L~Ls~N--~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~- 351 (693)
..+++|+.|+++ .|.+++. ++..+..+++|+.|++++| .+++..+......+++|+.|++++|.+++.
T Consensus 400 ~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 479 (592)
T 3ogk_B 400 TYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEG 479 (592)
T ss_dssp HHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHH
T ss_pred hhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHH
Confidence 235556666664 4555542 2333444566666666532 244433322223355677777777766542
Q ss_pred cCC--CCCCCCCEEEccCCcceee
Q 035786 352 LNS--SSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 352 ~~~--~~~~~l~~ldLs~N~l~g~ 373 (693)
++. ..+++|+.||+++|.|++.
T Consensus 480 ~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 480 LMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHhcCcccCeeeccCCCCcHH
Confidence 221 3456677777777776544
No 352
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=5.1e-20 Score=184.10 Aligned_cols=137 Identities=27% Similarity=0.337 Sum_probs=110.7
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|++|+|++|.+++..|..|.++++|++|+|++|++.+..+..|..+++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 67788888888888877888888888888888888887665666788888888888888888766666778888888888
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
++|.++ .+|..+..+++|+.|+|++|++++..+..|..+++|+.|++++|.+++..+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 888887 677778888888888888888887766778888888888888888876543
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.9e-19 Score=178.79 Aligned_cols=155 Identities=24% Similarity=0.265 Sum_probs=121.3
Q ss_pred EEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCC-cccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccC
Q 035786 97 SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175 (693)
Q Consensus 97 ~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 175 (693)
.+++++|.+. .+|..+ .+.+++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~~~---~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHI---PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCccCC---CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 3445555544 356543 3456788888888887755 4578888888888888888877777888888888888888
Q ss_pred CCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc
Q 035786 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
|.+++..|..|..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..|..|..+++|++|++++|.+++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88887777778888888888888888888778888888888888888888888778888888888888888888876544
No 354
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=1.2e-19 Score=194.21 Aligned_cols=174 Identities=28% Similarity=0.259 Sum_probs=134.9
Q ss_pred EEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccC-CCccCCEEecccCcCCccCccccCCCCCCCEEEccCC
Q 035786 98 FNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFG-NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176 (693)
Q Consensus 98 L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 176 (693)
++++++.+. .+|..+ .+.++.|+|++|.|++..+..|. ++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 23 l~c~~~~l~-~iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 23 LSCSKQQLP-NVPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EECCSSCCS-SCCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEeCCCCcC-ccCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 334444443 355443 34578899999998887777787 8889999999999998877788888999999999999
Q ss_pred CCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccc---cCCCCCCEEEccCCcCccc
Q 035786 177 LLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV---GNLDKLIELDLSKNSISGS 253 (693)
Q Consensus 177 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~---~~l~~L~~L~Ls~N~l~g~ 253 (693)
++++..+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9887777778888899999999998888778888888999999999998886444444 5688889999999998877
Q ss_pred CchhhhcCccc--ccccccccccc
Q 035786 254 LPLELRGLRNL--AKLVISENGLE 275 (693)
Q Consensus 254 ~p~~~~~l~~L--~~L~Ls~N~l~ 275 (693)
.+..+..++.+ +.|+|++|.+.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CHHHhhhccHhhcceEEecCCCcc
Confidence 66777777763 66777777664
No 355
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.80 E-value=6.7e-22 Score=225.85 Aligned_cols=281 Identities=13% Similarity=0.075 Sum_probs=203.2
Q ss_pred ccCCCCCEEEccCCCCC----CcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc-----------------------
Q 035786 90 GNLTLLSSFNASGLSLP----GSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS----------------------- 142 (693)
Q Consensus 90 ~~L~~L~~L~ls~~~l~----g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~----------------------- 142 (693)
.+++.|+.|+++.|.+. +.++..+. .+++|++|+|++|.+.+ +|..+.+++
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~-~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIAR-NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHH-HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHh-hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHh
Confidence 45678888888888876 34444444 37888888888877654 344444444
Q ss_pred ----cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCc-hhhhcCcCCCeeecccccCCCcCcccccCCCCCC
Q 035786 143 ----RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQ 217 (693)
Q Consensus 143 ----~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 217 (693)
+|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++++...+.++.....+++|+
T Consensus 267 ~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~ 345 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLK 345 (592)
T ss_dssp CCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCC
T ss_pred hccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCC
Confidence 44555444432 34567778889999999999999876543 4468899999999994433344555557789999
Q ss_pred EEEccC-----------Cccccc-CCccccCCCCCCEEEccCCcCcccCchhhhc-Cccccccccc----cccccccCCC
Q 035786 218 FLNLSD-----------NALTGF-IPSEVGNLDKLIELDLSKNSISGSLPLELRG-LRNLAKLVIS----ENGLEGQLSE 280 (693)
Q Consensus 218 ~L~Ls~-----------N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~Ls----~N~l~g~i~~ 280 (693)
.|++++ |.+++. ++..+..+++|++|+++.|.+++..+..+.. +++|++|+++ .|.+++...+
T Consensus 346 ~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~ 425 (592)
T 3ogk_B 346 RLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD 425 (592)
T ss_dssp EEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCH
T ss_pred EEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHH
Confidence 999993 666643 2223456899999999999999888877776 9999999996 6777753111
Q ss_pred ----cccCCCCCCCEEEccCC--cCCCcCcccccC-CCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCcccee-c
Q 035786 281 ----GLFPTLDQLQVVDLSGN--KLDGALPATLFL-RPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGD-L 352 (693)
Q Consensus 281 ----~~~~~l~~L~~L~Ls~N--~l~g~~p~~l~~-~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~-~ 352 (693)
.++..+++|+.|++++| .+++..+..+.. +++|+.|+|++|++++.........+++|+.|++++|.+++. +
T Consensus 426 ~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 12456889999999854 477665555543 789999999999998733223446778999999999998654 2
Q ss_pred CC--CCCCCCCEEEccCCcceee
Q 035786 353 NS--SSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 353 ~~--~~~~~l~~ldLs~N~l~g~ 373 (693)
+. ..+++|+.|+|++|++++.
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHhcCccCeeECcCCcCCHH
Confidence 22 3578999999999998765
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.5e-19 Score=205.52 Aligned_cols=185 Identities=27% Similarity=0.400 Sum_probs=95.8
Q ss_pred EEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCC
Q 035786 98 FNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL 177 (693)
Q Consensus 98 L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 177 (693)
+++..+.+...++. . .|++|+.|+|++|.+.. +| .|..+++|+.|+|++|.+.+..| +..+++|++|+|++|.
T Consensus 26 l~l~~~~i~~~~~~--~-~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 26 DNLKKKSVTDAVTQ--N-ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHTTCSCTTSEECH--H-HHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred HhccCCCcccccch--h-cCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 34444444443332 1 25666666666666653 22 35566666666666666654433 5566666666666666
Q ss_pred CCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchh
Q 035786 178 LTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE 257 (693)
Q Consensus 178 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 257 (693)
+++ +| .+..+++|+.|+|++|.+++ + +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..|
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 653 22 45555555555555555553 2 2355555555555555555543 345555555555555555554433
Q ss_pred hhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCC
Q 035786 258 LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD 300 (693)
Q Consensus 258 ~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~ 300 (693)
+..+++|+.|+|++|.+++. + .+..+++|+.|+|++|.++
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l-~--~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDL-R--ALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBC-G--GGTTCTTCSEEECCSEEEE
T ss_pred hccCCCCCEEECcCCCCCCC-h--HHccCCCCCEEEccCCcCc
Confidence 44455555555555544432 1 1244444444444444444
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=3.4e-19 Score=176.96 Aligned_cols=154 Identities=21% Similarity=0.201 Sum_probs=117.2
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCc-cccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVP-ATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
+.+++++|.++. +|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 478888888874 566553 346788888888887654 3577888888888888888877677788888888888888
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccccc
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ 277 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 277 (693)
|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 888777777777888888888888888877777788888888888888888777777777777777777777766543
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=4.7e-19 Score=175.90 Aligned_cols=153 Identities=22% Similarity=0.274 Sum_probs=101.0
Q ss_pred CEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccC
Q 035786 96 SSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175 (693)
Q Consensus 96 ~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 175 (693)
+.++++++.+. .+|..+ .++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l---~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNL---PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSC---CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCcc---CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 45666666654 455543 25677777777777766666677777777777777777766667777777777777777
Q ss_pred CCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
|.++...+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 77765444455666667777777776666666666666666666666666666655566666666666666666653
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=3.9e-19 Score=184.34 Aligned_cols=169 Identities=28% Similarity=0.377 Sum_probs=85.3
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|++++|.+... | .+..+++|++|+|++|++++..| +.++++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 55666666666665533 2 25555666666666666654333 5555666666666665553 22 245555555555
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.+++. +.+..+++|+.|++++|++++. ..++.+++|++|++++|++++..| +
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l------------------ 174 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L------------------ 174 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G------------------
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--h------------------
Confidence 555555432 2344444555555555544432 234444444444444444443222 3
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCc
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~ 324 (693)
..+++|+.|++++|++++. | .+..+++|+.|++++|+++
T Consensus 175 -------~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 175 -------AGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp -------TTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred -------cCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 4445555555555555432 2 2455555555555555554
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=2.1e-19 Score=192.30 Aligned_cols=176 Identities=28% Similarity=0.254 Sum_probs=96.7
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccC-CCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG-ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
+.++++++.++. +|..+. ..++.|+|++|++++..+..+. ++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666666653 454443 2466666666666655555555 666666666666666655555555566666666666
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCC
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLS 279 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~ 279 (693)
|.+++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++ +|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------------l~ 152 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-------------------------FP 152 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-------------------------CC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-------------------------eC
Confidence 65554444445555555555555555555555555555555555555555543 22
Q ss_pred Cccc---CCCCCCCEEEccCCcCCCcCcccccCCCC--CCEEEccCCcCc
Q 035786 280 EGLF---PTLDQLQVVDLSGNKLDGALPATLFLRPN--LRFLDLSRNNIT 324 (693)
Q Consensus 280 ~~~~---~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~--L~~L~Ls~N~l~ 324 (693)
...| ..+++|+.|+|++|+|++..+..+..++. ++.|+|++|.+.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 2222 33556666666666666544444444443 245555555544
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=7.8e-19 Score=182.08 Aligned_cols=174 Identities=30% Similarity=0.408 Sum_probs=149.6
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+..++.|+.|++++|.+.. +|. +. .+++|++|+|++|.+++..| +.++++|++|+|++|.+++ +| .+..+++
T Consensus 41 ~~~~l~~L~~L~l~~~~i~~-~~~-~~-~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~ 113 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIKS-VQG-IQ-YLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKK 113 (291)
T ss_dssp CHHHHHTCCEEECTTSCCCC-CTT-GG-GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTT
T ss_pred chhhcCcccEEEccCCCccc-Chh-Hh-cCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCC
Confidence 35577889999999998864 443 55 49999999999999997654 9999999999999999986 34 4999999
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|++|+|++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| +..+++|+.|++++
T Consensus 114 L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~ 187 (291)
T 1h6t_A 114 LKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 187 (291)
T ss_dssp CCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCC
Confidence 99999999999864 5688999999999999999865 578999999999999999997654 89999999999999
Q ss_pred CcCcccCchhhhcCccccccccccccccc
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
|.+++. | .+..+++|+.|++++|.++.
T Consensus 188 N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 188 NHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 999864 4 48888889999999988874
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=9.5e-19 Score=173.67 Aligned_cols=152 Identities=25% Similarity=0.302 Sum_probs=97.2
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.++++++.++ .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666665 3454443 46666666666666555556666666666666666666666666666666666666666
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
.+++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666444444566666666666666666666666666666666666666666666656666666666666666664
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.2e-19 Score=206.43 Aligned_cols=174 Identities=30% Similarity=0.411 Sum_probs=138.9
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+..|+.|+.|++++|.+.. +| .+. .+++|+.|+|++|.+++..| +.++++|+.|+|++|.+.+ +| .+..+++
T Consensus 38 ~~~~L~~L~~L~l~~n~i~~-l~-~l~-~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~ 110 (605)
T 1m9s_A 38 TQNELNSIDQIIANNSDIKS-VQ-GIQ-YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKK 110 (605)
T ss_dssp CHHHHTTCCCCBCTTCCCCC-CT-TGG-GCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTT
T ss_pred chhcCCCCCEEECcCCCCCC-Ch-HHc-cCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCC
Confidence 45677888888888888764 44 354 38888888888888887554 8888888888888888875 33 6888888
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|++|+|++|.+++ + ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++
T Consensus 111 L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 184 (605)
T 1m9s_A 111 LKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 184 (605)
T ss_dssp CCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcC
Confidence 8888888888885 3 4578888888888888888865 567888888888888888887655 88888888888888
Q ss_pred CcCcccCchhhhcCccccccccccccccc
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
|++++. ..+..+++|+.|+|++|.+.+
T Consensus 185 N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 185 NHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp SCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 888864 358888888888888888875
No 364
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=1.4e-19 Score=184.41 Aligned_cols=139 Identities=16% Similarity=0.131 Sum_probs=105.7
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcE--EEEEEecccccC-------------------------HHHHHHHHHHHhcCC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTT--VVVKKVSLHSFK-------------------------KESYMMELDLFSRVS 565 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~--vavK~l~~~~~~-------------------------~~~f~~Ei~~l~~l~ 565 (693)
+...+.||+|+||.||+|.. .+|+. ||||.+...... ...+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999998 78989 999986432111 136889999999999
Q ss_pred CCCccceeEEEEcCCCeeEEEEccCC-CC----ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhc-cCCCCC
Q 035786 566 HARLVPLLGQCLEHETEKLLVYKYMV-CG----DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLH-HECNPP 639 (693)
Q Consensus 566 H~niv~l~g~~~~~~~~~~lv~ey~~-~G----sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH-~~~~p~ 639 (693)
|+++.....+.. ...+|||||+. +| +|.++... .++.....++.+++.||.||| .. +
T Consensus 129 ~~~i~~p~~~~~---~~~~lVmE~~g~~g~~~~~L~~~~~~-----------~~~~~~~~i~~qi~~~l~~lH~~~---g 191 (258)
T 1zth_A 129 EAGVSVPQPYTY---MKNVLLMEFIGEDELPAPTLVELGRE-----------LKELDVEGIFNDVVENVKRLYQEA---E 191 (258)
T ss_dssp HTTCCCCCEEEE---ETTEEEEECCEETTEECCBHHHHGGG-----------GGGSCHHHHHHHHHHHHHHHHHTS---C
T ss_pred hCCCCCCeEEEc---CCCEEEEEecCCCCCccccHHHHhhc-----------cChHHHHHHHHHHHHHHHHHHHHC---C
Confidence 987533222222 24689999995 35 55554321 223456789999999999999 77 9
Q ss_pred eEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 640 LVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 640 iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
||||||||+|||+++ .++|+|||+|.....
T Consensus 192 ivHrDlkp~NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 192 LVHADLSEYNIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp EECSSCSTTSEEESS--SEEECCCTTCEETTS
T ss_pred EEeCCCCHHHEEEcC--cEEEEECcccccCCC
Confidence 999999999999998 999999999988643
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=2.1e-18 Score=172.26 Aligned_cols=153 Identities=27% Similarity=0.327 Sum_probs=82.2
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..+..+++|++|+|++|.
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 4555555554 3444332 556666666666666556666666666666666666654433444555555555555555
Q ss_pred CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCc
Q 035786 202 FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 202 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
+++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++..+ .
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~-------------------------~ 153 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPH-------------------------G 153 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCT-------------------------T
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCH-------------------------H
Confidence 55444444455555555555555554 344444455555555555555443333 3
Q ss_pred ccCCCCCCCEEEccCCcCCCcC
Q 035786 282 LFPTLDQLQVVDLSGNKLDGAL 303 (693)
Q Consensus 282 ~~~~l~~L~~L~Ls~N~l~g~~ 303 (693)
.|..+++|+.|++++|.+++..
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCTTB
T ss_pred HHhCCCCCCEEEeeCCCccCCc
Confidence 3455556666666666665543
No 366
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.4e-18 Score=169.41 Aligned_cols=151 Identities=15% Similarity=0.205 Sum_probs=66.5
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..+..+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 444555555555554 333 3444555555555555332 122344445555555555544444444444444444444
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGL 274 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 274 (693)
+++|.+++..|..+..+++|+.|++++|.+.+.+| .+..+++|++|++++|.+++. + .+..+++|++|++++|++
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 44444444444444444444444444444112222 344444444444444444431 1 333444444444444433
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=3e-18 Score=166.98 Aligned_cols=155 Identities=18% Similarity=0.245 Sum_probs=134.7
Q ss_pred ccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCC
Q 035786 90 GNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLS 169 (693)
Q Consensus 90 ~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 169 (693)
..++.|+.|++++|.+. .+| .+. .+++|++|++++|.++ .++.+.++++|++|+|++|.+++..|..+..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~-~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIE-YAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGG-GCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHh-cCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 56788999999999988 677 465 4999999999999765 345799999999999999999988899999999999
Q ss_pred EEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCc
Q 035786 170 NLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS 249 (693)
Q Consensus 170 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 249 (693)
+|+|++|.+++..|..+..+++|++|++++|.+.+.+| .+..+++|+.|++++|++++ ++ .+..+++|++|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 99999999999889999999999999999998444666 68999999999999999986 44 78999999999999999
Q ss_pred Ccc
Q 035786 250 ISG 252 (693)
Q Consensus 250 l~g 252 (693)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=9.9e-20 Score=212.09 Aligned_cols=163 Identities=28% Similarity=0.318 Sum_probs=111.1
Q ss_pred ecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCccc
Q 035786 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT 227 (693)
Q Consensus 148 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 227 (693)
+++.|.+. ..|+.+..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.++ .+|..|+.+++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 34445554 55778888999999999999988 77888888899999999999988 78888888999999999999988
Q ss_pred ccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccc
Q 035786 228 GFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATL 307 (693)
Q Consensus 228 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l 307 (693)
.+|..|+++++|++|+|++|.|+ .+|..|+++++|++|+|++|.|++.+|..+......+..++|++|.++|.+|.
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~-- 359 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH-- 359 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc--
Confidence 67888888888999999988886 67777888888888888888888776654321111223467788888777765
Q ss_pred cCCCCCCEEEccCC
Q 035786 308 FLRPNLRFLDLSRN 321 (693)
Q Consensus 308 ~~~~~L~~L~Ls~N 321 (693)
.|+.|+++.|
T Consensus 360 ----~l~~l~l~~n 369 (727)
T 4b8c_D 360 ----ERRFIEINTD 369 (727)
T ss_dssp ----C---------
T ss_pred ----ccceeEeecc
Confidence 3455666666
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=9.8e-21 Score=214.07 Aligned_cols=122 Identities=23% Similarity=0.284 Sum_probs=70.5
Q ss_pred CCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccc
Q 035786 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVIS 270 (693)
Q Consensus 191 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 270 (693)
.|+.|+|++|.+++ +|. ++.+++|+.|+|++|+++ .+|..++++++|+.|+|++|++++ +| .++++++|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 35566666666654 444 566666666666666665 455566666666666666666664 44 56666666666666
Q ss_pred cccccccC-CCcccCCCCCCCEEEccCCcCCCcCccc---ccCCCCCCEEEc
Q 035786 271 ENGLEGQL-SEGLFPTLDQLQVVDLSGNKLDGALPAT---LFLRPNLRFLDL 318 (693)
Q Consensus 271 ~N~l~g~i-~~~~~~~l~~L~~L~Ls~N~l~g~~p~~---l~~~~~L~~L~L 318 (693)
+|++++.+ |.. +..+++|+.|+|++|.+++.+|.. +..+++|+.|++
T Consensus 517 ~N~l~~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQP-LVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGG-GGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHH-HhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 66665543 333 355666666666666666554421 223567777654
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=2e-20 Score=211.51 Aligned_cols=176 Identities=23% Similarity=0.260 Sum_probs=126.3
Q ss_pred CCccCCEEecccCcCCccCccccCCCCCCCEEEccCCC-------------CCCcCchhhhcCcCCCeee-cccc-----
Q 035786 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-------------LTGEIPNAISLLGNLTRLN-LASN----- 200 (693)
Q Consensus 140 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N----- 200 (693)
.+++|+.|+|++|.++ .+|++++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L 425 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDL 425 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchh
Confidence 3445555555555553 445555555555555554443 4555666666666666666 4444
Q ss_pred --------cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccc
Q 035786 201 --------FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISEN 272 (693)
Q Consensus 201 --------~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 272 (693)
.++. +|. ..|+.|+|++|++++ +|. ++.+++|+.|+|++|.++ .+|..++++++|+.|+|++|
T Consensus 426 ~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N 496 (567)
T 1dce_A 426 RSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDN 496 (567)
T ss_dssp HHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred hhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCC
Confidence 3332 121 258889999999986 666 888999999999999998 77888899999999999999
Q ss_pred cccccCCCcccCCCCCCCEEEccCCcCCCcC-cccccCCCCCCEEEccCCcCcccCC
Q 035786 273 GLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL-PATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 273 ~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~-p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
++++ +| .+..+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++..|
T Consensus 497 ~l~~-lp--~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 497 ALEN-VD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCCC-CG--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCC-Cc--ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 8886 55 3578888999999999988877 8888888888888888888887655
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=3.3e-18 Score=174.68 Aligned_cols=124 Identities=28% Similarity=0.398 Sum_probs=51.3
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|++++|.++. +| .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +|... . ++|++|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEE
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEE
Confidence 4445555555554442 22 34444444444444444443222 4444444444444444443 22111 1 3444444
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
+++|.+++ +| .+..+++|+.|++++|++++. | .++.+++|++|++++|+++
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 44444432 11 233444444444444444332 1 2333444444444444443
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=4.9e-18 Score=173.39 Aligned_cols=169 Identities=21% Similarity=0.250 Sum_probs=99.7
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+.++..++++.|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..| +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 455666677777776432 46667777777777777763 44 56667777777777777765433 66677777777
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|++++ +|... . ++|+.|+|++|++++. +.+..+++|++|++++|++++. | .+..+++|++|++++|++++
T Consensus 92 L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 77777664 33322 2 6666666666666642 2466666666666666666543 2 45555555555555555554
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
. ..+..+++|+.|++++|.+++
T Consensus 165 ~---~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 165 T---GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp C---TTSTTCCCCCEEEEEEEEEEC
T ss_pred h---HHhccCCCCCEEeCCCCcccC
Confidence 3 123444445555555554443
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=2.6e-17 Score=159.66 Aligned_cols=132 Identities=27% Similarity=0.373 Sum_probs=93.2
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCcc-ccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPA-TLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
+++++++|.++ .+|..+.. +|++|+|++|.+++..+. .|..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666664 45554432 666777777776655543 366777777777777777766677777777777777777
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
|.+++..|..|..+++|++|+|++|++++.+|..|..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 77777666667777788888888888887777778888888888888888876654
No 374
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=9.5e-17 Score=151.91 Aligned_cols=133 Identities=29% Similarity=0.299 Sum_probs=104.5
Q ss_pred CCCccEEEecCCCCC-cCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCee
Q 035786 117 LPALQVLDLRSCSLS-GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 195 (693)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 577888999988887 77888888888899999999888865 678888888999999888887788888778888888
Q ss_pred ecccccCCCcC-cccccCCCCCCEEEccCCcccccCC---ccccCCCCCCEEEccCCcCc
Q 035786 196 NLASNFFTGQI-PSGLYSLSSIQFLNLSDNALTGFIP---SEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 196 ~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls~N~l~ 251 (693)
++++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888887532 2567777777778877777775544 35667777777777777665
No 375
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.68 E-value=3.8e-19 Score=203.04 Aligned_cols=282 Identities=14% Similarity=0.069 Sum_probs=172.7
Q ss_pred ccCCCCCEEEccCCCCCCcCchHhh---hCCCCccEEEecCCC--CCcC-CCcccCCCccCCEEecccCcCCccCccccC
Q 035786 90 GNLTLLSSFNASGLSLPGSIPEWFG---YRLPALQVLDLRSCS--LSGS-IPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163 (693)
Q Consensus 90 ~~L~~L~~L~ls~~~l~g~ip~~~~---~~l~~L~~L~Ls~n~--l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (693)
.++++|++|++++|.+.+..+.++. ..+++|++|+|++|. +... ++..+.++++|++|+|++|...+.+|..+.
T Consensus 153 ~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~ 232 (594)
T 2p1m_B 153 ATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQ 232 (594)
T ss_dssp HHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHH
T ss_pred HhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHh
Confidence 3789999999999987665544432 247799999999886 2211 122234568899999988833333666666
Q ss_pred CCCCCCEEEccCCC--------------------------CC----CcCchhhhcCcCCCeeecccccCCCcC-cccccC
Q 035786 164 ELKKLSNLDLSRNL--------------------------LT----GEIPNAISLLGNLTRLNLASNFFTGQI-PSGLYS 212 (693)
Q Consensus 164 ~l~~L~~L~Ls~N~--------------------------l~----~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~ 212 (693)
.+++|++|+++.+. +. +.+|..+..+++|++|++++|.+++.. +..+..
T Consensus 233 ~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~ 312 (594)
T 2p1m_B 233 RAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQ 312 (594)
T ss_dssp HCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTT
T ss_pred cCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhc
Confidence 77777777755442 11 124444456788888888888876432 233567
Q ss_pred CCCCCEEEccCCcccc-cCCccccCCCCCCEEEcc---------CCcCcccCchhhh-cCccccccccccccccccCCCc
Q 035786 213 LSSIQFLNLSDNALTG-FIPSEVGNLDKLIELDLS---------KNSISGSLPLELR-GLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 213 l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls---------~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
+++|+.|++++| ++. .++.....+++|++|+++ .+.+++.....+. ++++|++|.++.|.+++.....
T Consensus 313 ~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~ 391 (594)
T 2p1m_B 313 CPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALIT 391 (594)
T ss_dssp CTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHH
T ss_pred CCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHH
Confidence 788888888877 332 222223346778888773 3455543333333 4777888877777776544443
Q ss_pred ccCCCCCCCEEEcc--C----CcCCCc-----CcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccce
Q 035786 282 LFPTLDQLQVVDLS--G----NKLDGA-----LPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYG 350 (693)
Q Consensus 282 ~~~~l~~L~~L~Ls--~----N~l~g~-----~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g 350 (693)
+...+++|+.|+++ + |.++.. ++..+..+++|+.|+|++ ++++..+......+++|+.|++++|.+++
T Consensus 392 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~ 470 (594)
T 2p1m_B 392 IARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSD 470 (594)
T ss_dssp HHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSH
T ss_pred HHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcH
Confidence 33346777888877 3 455521 222245567777777766 55543332222235667777777777754
Q ss_pred ecCC---CCCCCCCEEEccCCcceee
Q 035786 351 DLNS---SSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 351 ~~~~---~~~~~l~~ldLs~N~l~g~ 373 (693)
.... ..+++|+.|+|++|.+++.
T Consensus 471 ~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 471 LGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred HHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 3221 2356777777777777543
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=1.4e-16 Score=154.43 Aligned_cols=131 Identities=25% Similarity=0.313 Sum_probs=94.3
Q ss_pred CEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCch-hhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccC
Q 035786 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPN-AISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223 (693)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 223 (693)
+++++++|.++ .+|..+.. +|++|+|++|.+++..+. .+..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67888888885 56665543 788888888888765553 377777778888877777777777777777777777777
Q ss_pred CcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 224 NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 224 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|.+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 7777777777777777777777777777766666666666666666666665443
No 377
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=7.6e-17 Score=149.37 Aligned_cols=128 Identities=26% Similarity=0.265 Sum_probs=92.4
Q ss_pred CCCccEEEecCCCCC-cCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCee
Q 035786 117 LPALQVLDLRSCSLS-GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 195 (693)
.++|+.|++++|.++ +.+|..++.+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 466788888888887 67777778888888888888888765 667778888888888888877677777777778888
Q ss_pred ecccccCCCc-CcccccCCCCCCEEEccCCcccccCC---ccccCCCCCCEEEcc
Q 035786 196 NLASNFFTGQ-IPSGLYSLSSIQFLNLSDNALTGFIP---SEVGNLDKLIELDLS 246 (693)
Q Consensus 196 ~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls 246 (693)
++++|.+++. .|..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777653 33566666777777777776665444 345556666666554
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.5e-16 Score=150.56 Aligned_cols=133 Identities=22% Similarity=0.196 Sum_probs=86.9
Q ss_pred CccCCEEecccCcCC-ccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEE
Q 035786 141 LSRLNVLYLSGNSLA-GNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFL 219 (693)
Q Consensus 141 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 219 (693)
.++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356777777777776 56666667777777777777777654 556666777777777777766666666666777777
Q ss_pred EccCCcccccC-CccccCCCCCCEEEccCCcCcccCc---hhhhcCcccccccccccccc
Q 035786 220 NLSDNALTGFI-PSEVGNLDKLIELDLSKNSISGSLP---LELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 220 ~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls~N~l~ 275 (693)
++++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777766532 2556666666677776666665444 35566666666666666554
No 379
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.4e-16 Score=147.48 Aligned_cols=129 Identities=22% Similarity=0.222 Sum_probs=104.1
Q ss_pred CccCCEEecccCcCC-ccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEE
Q 035786 141 LSRLNVLYLSGNSLA-GNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFL 219 (693)
Q Consensus 141 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 219 (693)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467889999999988 78888888889999999999988865 677888888888888888887778777778888888
Q ss_pred EccCCccccc-CCccccCCCCCCEEEccCCcCcccCc---hhhhcCcccccccccc
Q 035786 220 NLSDNALTGF-IPSEVGNLDKLIELDLSKNSISGSLP---LELRGLRNLAKLVISE 271 (693)
Q Consensus 220 ~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls~ 271 (693)
++++|++++. .|..++.+++|++|++++|.+++..+ ..+..+++|++|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888888763 34678888888888888888887655 4677778888777753
No 380
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.65 E-value=1.6e-18 Score=197.84 Aligned_cols=205 Identities=16% Similarity=0.143 Sum_probs=109.5
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCC-CCCcC-CCcccCCCccCCEEecccCcCCccCcccc----CC
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSC-SLSGS-IPGSFGNLSRLNVLYLSGNSLAGNVPATL----GE 164 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n-~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~ 164 (693)
.++.|+.|+++++.+++..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 56677777777777766666666534777777777777 34332 33344467777777777777665443333 35
Q ss_pred CCCCCEEEccCCC--CCC-cCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCc-------ccccCCccc
Q 035786 165 LKKLSNLDLSRNL--LTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNA-------LTGFIPSEV 234 (693)
Q Consensus 165 l~~L~~L~Ls~N~--l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-------l~g~~p~~~ 234 (693)
+++|++|++++|. ++. .++..+..+++|++|++++|...+.+|..+..+++|+.|+++.+. +.+ ++..+
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l 261 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVAL 261 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHH
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHH
Confidence 5677777777775 221 112223445777777777763222356666666777777644332 222 22234
Q ss_pred cCCCCCCEE-EccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCC
Q 035786 235 GNLDKLIEL-DLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGN 297 (693)
Q Consensus 235 ~~l~~L~~L-~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N 297 (693)
.++++|+.| .+.... .+.+|..+..+++|++|++++|.+++.....++..+++|+.|++++|
T Consensus 262 ~~~~~L~~Ls~~~~~~-~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAV-PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp HTCTTCCEEECCBTCC-GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred hcCCCcccccCCcccc-hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 444444444 222211 12233333444555555555555443322222334455555555554
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=2.8e-15 Score=143.13 Aligned_cols=132 Identities=23% Similarity=0.234 Sum_probs=86.6
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.+++++|+++. +|..+ .++|++|++++|++++..+..+..+++|++|+|++|.+++..+..+..+++|++|++++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 455666666552 34332 246666666666666555555666667777777777766555555666777777777777
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
.+++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7766555556777777777777777776555556777788888888887776554
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=2.6e-15 Score=145.62 Aligned_cols=127 Identities=25% Similarity=0.345 Sum_probs=71.8
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
++++++|.++ .+|..+. ++|++|+|++|.++ .+|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555555554 3343332 35555555555554 444555555555566665555555555555555556666666666
Q ss_pred CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 202 FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 202 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 555555556666666666666666665444456666666666666666653
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=3.2e-15 Score=144.97 Aligned_cols=127 Identities=26% Similarity=0.299 Sum_probs=85.0
Q ss_pred CEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCC
Q 035786 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDN 224 (693)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 224 (693)
+++++++|.++ .+|..+. ++|++|+|++|.++ .+|..+..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56777777776 4565443 56777777777776 56677777777777777777777666666777777777777777
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 225 ALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 225 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 777666666677777777777777766544444555555555555555543
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=3.8e-15 Score=142.18 Aligned_cols=128 Identities=22% Similarity=0.255 Sum_probs=64.0
Q ss_pred CCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccC
Q 035786 144 LNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223 (693)
Q Consensus 144 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 223 (693)
.+.+++++|.++ .+|..+ .++|++|++++|++++..+..+..+++|++|++++|.+++..+..+..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 355666666665 334332 24566666666666544444455555555555555555544444445555555555555
Q ss_pred CcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccc
Q 035786 224 NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGL 274 (693)
Q Consensus 224 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 274 (693)
|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 136 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCe
Confidence 555544444445555555555555555433333333333333333333333
No 385
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.57 E-value=2.7e-15 Score=159.12 Aligned_cols=135 Identities=13% Similarity=0.125 Sum_probs=97.8
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---------------CHHHH--------HHHHHHHhcCCCCCcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---------------KKESY--------MMELDLFSRVSHARLV 570 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---------------~~~~f--------~~Ei~~l~~l~H~niv 570 (693)
|.....||+|+||.||+|..++|+.||||.+..... ....+ .+|...|.++++..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 667789999999999999988999999998753211 01122 2456666666555443
Q ss_pred ceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCe
Q 035786 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSI 650 (693)
Q Consensus 571 ~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NI 650 (693)
...-+... ..+|||||++++.|.++... -+ ...++.+++.+|.|||.. +||||||||.||
T Consensus 177 vp~p~~~~---~~~LVME~i~G~~L~~l~~~-----------~~---~~~l~~qll~~l~~lH~~---gIVHrDLKp~NI 236 (397)
T 4gyi_A 177 VPEPIAQS---RHTIVMSLVDALPMRQVSSV-----------PD---PASLYADLIALILRLAKH---GLIHGDFNEFNI 236 (397)
T ss_dssp CCCEEEEE---TTEEEEECCSCEEGGGCCCC-----------SC---HHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred CCeeeecc---CceEEEEecCCccHhhhccc-----------HH---HHHHHHHHHHHHHHHHHC---CCcCCCCCHHHE
Confidence 22222221 24799999999988765421 11 235788999999999988 899999999999
Q ss_pred eeCCCCc----------eEECCcccccc
Q 035786 651 LLDDKFE----------VRLGSLSELHA 668 (693)
Q Consensus 651 Lld~~~~----------~ki~Dfgla~~ 668 (693)
|+++++. +.|.||+=+-.
T Consensus 237 Ll~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 237 LIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred EEeCCCCcccccccccceEEEEeCCccc
Confidence 9998773 88999986544
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=1.7e-17 Score=161.68 Aligned_cols=133 Identities=26% Similarity=0.398 Sum_probs=60.7
Q ss_pred CCccEEEecCCCCCcCCCc------ccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcC
Q 035786 118 PALQVLDLRSCSLSGSIPG------SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGN 191 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 191 (693)
+.++.++++.+.++|.+|. .|+++++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3344444444444444333 44444444444444444443 33 4444444555555555444 34444444445
Q ss_pred CCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCC-ccccCCCCCCEEEccCCcCcccCc
Q 035786 192 LTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIP-SEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 192 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
|++|++++|.+++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+++.+|
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 5555555555443 22 34444445555555554443211 234455555555555555544433
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=4.3e-15 Score=156.65 Aligned_cols=102 Identities=17% Similarity=0.261 Sum_probs=85.0
Q ss_pred CCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCC-EEEccCCcCCCcCcccccCCCCCCE
Q 035786 237 LDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQ-VVDLSGNKLDGALPATLFLRPNLRF 315 (693)
Q Consensus 237 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~-~L~Ls~N~l~g~~p~~l~~~~~L~~ 315 (693)
+++|+.|+|++|+++...+..|.++++|+.+++++| ++ .|+...|.++++|+ .+++.+ +++..-+..|..+++|+.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 678999999998888777778899999999999888 54 68888889999998 999988 777677788888999999
Q ss_pred EEccCCcCcccCCccCcCCCCCCcEEE
Q 035786 316 LDLSRNNITGSWPILSTNGNASGAVFN 342 (693)
Q Consensus 316 L~Ls~N~l~g~~p~~~~~~~~~l~~l~ 342 (693)
|++++|+++ .++...+..+.+|+.++
T Consensus 302 l~l~~n~i~-~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 302 VLATGDKIT-TLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECSSCCC-EECTTTTCTTCCCCEEE
T ss_pred EEeCCCccC-ccchhhhcCCcchhhhc
Confidence 999999887 56656777788888775
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=3.2e-17 Score=159.76 Aligned_cols=155 Identities=24% Similarity=0.262 Sum_probs=127.9
Q ss_pred cccCCCCCEEEccCCCCCCcCch------HhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCcccc
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPE------WFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATL 162 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~------~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 162 (693)
+.....++.++++.+.+.|.+|. .+.. +++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~-l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLST-LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHH-TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhc-CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 34455666677777778887776 7875 9999999999999987 67 8999999999999999998 678888
Q ss_pred CCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCc-ccccCCCCCCEEEccCCcccccCCcc--------
Q 035786 163 GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP-SGLYSLSSIQFLNLSDNALTGFIPSE-------- 233 (693)
Q Consensus 163 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~-------- 233 (693)
..+++|++|+|++|.+++ +| .+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++.+|..
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 167 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRI 167 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHH
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHH
Confidence 888999999999999996 55 68999999999999999985332 47889999999999999998876653
Q ss_pred --ccCCCCCCEEEccCCcCc
Q 035786 234 --VGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 234 --~~~l~~L~~L~Ls~N~l~ 251 (693)
+..+++|+.|| +|.++
T Consensus 168 ~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 168 EVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHCSSCSEEC--CGGGT
T ss_pred HHHHhCCCcEEEC--CcccC
Confidence 56666676665 44443
No 389
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=3.9e-15 Score=156.99 Aligned_cols=261 Identities=15% Similarity=0.103 Sum_probs=168.1
Q ss_pred CCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCC--cCCCcccCCCccCCEEecccCcCCccCccccCC-----
Q 035786 92 LTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLS--GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGE----- 164 (693)
Q Consensus 92 L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~--g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----- 164 (693)
+..++.|.++++ +.+.--..+...+++|+.|||++|++. ...+. .++.++.+.+..|.+. +..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---HHHhccccccc
Confidence 556777777643 111111123333788999999999987 22222 2223445555554322 234555
Q ss_pred ---CCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcc----cccCCccccCC
Q 035786 165 ---LKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNAL----TGFIPSEVGNL 237 (693)
Q Consensus 165 ---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l----~g~~p~~~~~l 237 (693)
+++|+.|+|.+ .++..-+.+|.++++|+.|++++|.+....+..|..+.++..+.+..+.. ...-...|.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 78888888877 66655556777788888888888877755566677766666666554221 11122233333
Q ss_pred CCCC--------------------------EEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCE
Q 035786 238 DKLI--------------------------ELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQV 291 (693)
Q Consensus 238 ~~L~--------------------------~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~ 291 (693)
..|+ .+.+.++-...........+++|+.++|++|+++ .|++..|.++++|+.
T Consensus 176 ~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 176 EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLK 254 (329)
T ss_dssp CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCE
T ss_pred cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCE
Confidence 3333 3333332111111111124789999999999987 788889999999999
Q ss_pred EEccCCcCCCcCcccccCCCCCC-EEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEE
Q 035786 292 VDLSGNKLDGALPATLFLRPNLR-FLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLID 364 (693)
Q Consensus 292 L~Ls~N~l~g~~p~~l~~~~~L~-~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ld 364 (693)
+++.+| ++..-+..|..+++|+ .+++.+ +++ .|+...+..+.+|+.+++++|++...-+. ..+++|+.+.
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 999998 7777778889999999 999998 676 56667788999999999999988754332 3455676664
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=1.1e-14 Score=138.85 Aligned_cols=128 Identities=22% Similarity=0.249 Sum_probs=70.1
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCc-cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLS-RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 195 (693)
+++|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. +.+..+++|++|+|++|.+++..|..+..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 5666777777776663 343 33333 666666666666653 456666666666666666664433344566666666
Q ss_pred ecccccCCCcCcc--cccCCCCCCEEEccCCcccccCCcc----ccCCCCCCEEEccCCcC
Q 035786 196 NLASNFFTGQIPS--GLYSLSSIQFLNLSDNALTGFIPSE----VGNLDKLIELDLSKNSI 250 (693)
Q Consensus 196 ~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~----~~~l~~L~~L~Ls~N~l 250 (693)
++++|.++ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.||++.|..
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 66666653 3443 45555555555555555542 2332 44444444444444433
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=2e-14 Score=137.08 Aligned_cols=133 Identities=19% Similarity=0.190 Sum_probs=79.5
Q ss_pred cCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCC
Q 035786 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQ 217 (693)
Q Consensus 138 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 217 (693)
+.++++|+.|+|++|.++. +|......++|++|+|++|.+++. ..+..+++|++|++++|.+++..|..+..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 4456666666666666663 343222223666666666666643 4566666666666666666644333346666666
Q ss_pred EEEccCCcccccCCc--cccCCCCCCEEEccCCcCcccCch----hhhcCcccccccccccccc
Q 035786 218 FLNLSDNALTGFIPS--EVGNLDKLIELDLSKNSISGSLPL----ELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 218 ~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~L~Ls~N~l~ 275 (693)
+|++++|+++ .+|. .+..+++|+.|++++|.++. +|. .+..+++|+.|++++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666666664 3444 56666666666666666653 343 2666666666666666554
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=4.6e-13 Score=126.85 Aligned_cols=107 Identities=29% Similarity=0.302 Sum_probs=65.3
Q ss_pred CEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCC
Q 035786 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDN 224 (693)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 224 (693)
+.+++++|.++. +|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455555555542 444332 55666666666666555555666666666666666666554555566667777777777
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccC
Q 035786 225 ALTGFIPSEVGNLDKLIELDLSKNSISGSL 254 (693)
Q Consensus 225 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 254 (693)
++++..+..|.++++|++|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 776655556677777777777777776543
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.44 E-value=3.8e-12 Score=137.54 Aligned_cols=239 Identities=10% Similarity=0.087 Sum_probs=155.8
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
+|+.++|..+ ++..-..+|.++ +|+.+.|.. .+...-+..|.++++|+.++|+.|.++..-...|. ..+|+.+.+.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 6777777665 554555567664 677777775 56555566777788888888877777744344444 5777777777
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc---
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE--- 275 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--- 275 (693)
.+ ++..-...|.++++|+.+++..| ++..-...|.+ .+|+.+++ .|.++..-+..|.++++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 44 55444566777778888887764 45444455666 67777777 34566555667777888888887777653
Q ss_pred -ccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC
Q 035786 276 -GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS 354 (693)
Q Consensus 276 -g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~ 354 (693)
..++...|..+++|+.+++. |.++..-...|..+++|+.++|..| ++ .++...+..+ .|+.+++++|.+.- ++.
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~-~L~~l~l~~n~~~~-l~~ 362 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT-GIKEVKVEGTTPPQ-VFE 362 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS-CCCEEEECCSSCCB-CCC
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC-CCCEEEEcCCCCcc-ccc
Confidence 13666777778888888887 4466555666777788888888554 44 4554555666 78888887776543 222
Q ss_pred CC---C-CCCCEEEccCCcc
Q 035786 355 SS---F-RKFSLIDLSSNYF 370 (693)
Q Consensus 355 ~~---~-~~l~~ldLs~N~l 370 (693)
.. + ..+..|.+..|.+
T Consensus 363 ~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 363 KVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSCCCSCTTCCEEEECGGGH
T ss_pred ccccCCCCCccEEEeCHHHH
Confidence 22 2 2456666666543
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=4.8e-13 Score=126.70 Aligned_cols=105 Identities=27% Similarity=0.346 Sum_probs=64.7
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.+++++|.++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455666665553 444442 55666666666666655666666666666666666666555555566666666666666
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccc
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTG 228 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 228 (693)
++++..+..|..+++|+.|+|++|.++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 6665555556666777777777776654
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=9.3e-13 Score=125.25 Aligned_cols=87 Identities=26% Similarity=0.266 Sum_probs=42.7
Q ss_pred CCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEc
Q 035786 166 KKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDL 245 (693)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 245 (693)
++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444444444444444444444444444333333445555555555555555444444555555666666
Q ss_pred cCCcCcc
Q 035786 246 SKNSISG 252 (693)
Q Consensus 246 s~N~l~g 252 (693)
++|.+..
T Consensus 113 ~~N~~~c 119 (174)
T 2r9u_A 113 YNNPWDC 119 (174)
T ss_dssp CSSCBCT
T ss_pred CCCCccc
Confidence 6665553
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=1.1e-12 Score=124.77 Aligned_cols=105 Identities=22% Similarity=0.326 Sum_probs=82.2
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67888888875 5666654 77888888888888777888888888888888888888665556678888888888888
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccc
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTG 228 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 228 (693)
++++..+..+..+++|+.|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 8886555567888888888888888764
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.40 E-value=9.8e-12 Score=134.28 Aligned_cols=237 Identities=15% Similarity=0.159 Sum_probs=122.0
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
..++.+.+.+ .++..-+.+|.+. +|+.+.|..| ++..-...|.+. +|+.+++.. .++..-+.+|.++.+|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4444444433 2333334455553 5666666554 443434455553 466666654 444344455666666666666
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ 277 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 277 (693)
+.|.++. +|.......+|+.+.|..+ ++..-...|.++++|+.+++..| ++..-...|.+ .+|+.+.+. |.++ .
T Consensus 188 ~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~-~ 261 (401)
T 4fdw_A 188 SKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVT-N 261 (401)
T ss_dssp TTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCC-E
T ss_pred CCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCcc-E
Confidence 6666553 3332223456666666533 44444455666666666666543 34334444554 456666663 3333 4
Q ss_pred CCCcccCCCCCCCEEEccCCcCC-----CcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceec
Q 035786 278 LSEGLFPTLDQLQVVDLSGNKLD-----GALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDL 352 (693)
Q Consensus 278 i~~~~~~~l~~L~~L~Ls~N~l~-----g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~ 352 (693)
|+...|..+++|+.+++.+|.+. ...+..|..+++|+.++|.+ +++ .++...+..+.+|+.+++.+| +. .|
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~~-l~-~I 337 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPAN-VT-QI 337 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSCCEEEECTT-CC-EE
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCccEEEECcc-cc-EE
Confidence 55555666666666666665554 23344555566666666663 343 444445555566666666444 22 12
Q ss_pred CC---CCCCCCCEEEccCCcc
Q 035786 353 NS---SSFRKFSLIDLSSNYF 370 (693)
Q Consensus 353 ~~---~~~~~l~~ldLs~N~l 370 (693)
+. ..+ +|+.+++++|.+
T Consensus 338 ~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 338 NFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp CTTSSSSS-CCCEEEECCSSC
T ss_pred cHHhCCCC-CCCEEEEcCCCC
Confidence 22 223 566666666543
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=1.6e-13 Score=146.98 Aligned_cols=135 Identities=22% Similarity=0.199 Sum_probs=59.6
Q ss_pred CCCCEEEccCCCCCCcCchHhhh----CCCCccEEEecCCCCCcCCCccc-CCCccCCEEecccCcCCccCcccc-----
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGY----RLPALQVLDLRSCSLSGSIPGSF-GNLSRLNVLYLSGNSLAGNVPATL----- 162 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~----~l~~L~~L~Ls~n~l~g~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~----- 162 (693)
+.|+.|++++|.++..-...+.. ..++|++|+|++|.++..-...+ ..+++|+.|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 44556666666655432222221 12456666666665543222222 223455555555555543222222
Q ss_pred CCCCCCCEEEccCCCCCC----cCchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCccc
Q 035786 163 GELKKLSNLDLSRNLLTG----EIPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNALT 227 (693)
Q Consensus 163 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 227 (693)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|+.|+|++|.++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 233455555555555542 1233334444555555555554321 1223333444444444444443
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=1.6e-13 Score=146.79 Aligned_cols=167 Identities=22% Similarity=0.189 Sum_probs=81.3
Q ss_pred CCCccEEEecCCCCCcCCCcccC-----CCccCCEEecccCcCCccCcccc-CCCCCCCEEEccCCCCCCcCchhhh---
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFG-----NLSRLNVLYLSGNSLAGNVPATL-GELKKLSNLDLSRNLLTGEIPNAIS--- 187 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~--- 187 (693)
++.|+.|+|++|.++......+. +.++|++|+|++|.++......+ ..+++|++|+|++|.++..-...+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 46677888888777653322222 22566777777776653322222 2344566666666666543222221
Q ss_pred --cCcCCCeeecccccCCC----cCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcC
Q 035786 188 --LLGNLTRLNLASNFFTG----QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGL 261 (693)
Q Consensus 188 --~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 261 (693)
..++|+.|+|++|.++. .++..+..+++|++|+|++|.++..-. ..++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~--------------------~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGL--------------------ELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHH--------------------HHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHH--------------------HHHHHHHhcC
Confidence 23455555555555542 122233344445555555554432110 0112333444
Q ss_pred cccccccccccccccc----CCCcccCCCCCCCEEEccCCcCCCcCc
Q 035786 262 RNLAKLVISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLDGALP 304 (693)
Q Consensus 262 ~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L~Ls~N~l~g~~p 304 (693)
++|++|+|++|.+++. +... +...++|++|+|++|.|+..-.
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~-L~~~~~L~~L~Ls~N~i~~~g~ 256 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARA-AREHPSLELLHLYFNELSSEGR 256 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHH-HHHCSSCCEEECTTSSCCHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHH-HHhCCCCCEEeccCCCCCHHHH
Confidence 4555555555554421 1111 1234567777888887765433
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=1.6e-11 Score=130.00 Aligned_cols=78 Identities=24% Similarity=0.278 Sum_probs=38.3
Q ss_pred EecCC-CCCcCCCcccCCCccCCEEeccc-CcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 124 DLRSC-SLSGSIPGSFGNLSRLNVLYLSG-NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 124 ~Ls~n-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
+++++ .+++ +|. |+.+++|++|+|++ |.|.+..|..|.+|++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 4442 444 55555555555553 55554444445555555555555555554444444444444444444444
Q ss_pred CC
Q 035786 202 FT 203 (693)
Q Consensus 202 l~ 203 (693)
|+
T Consensus 92 l~ 93 (347)
T 2ifg_A 92 LE 93 (347)
T ss_dssp CS
T ss_pred cc
Confidence 44
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=1.8e-11 Score=129.63 Aligned_cols=106 Identities=25% Similarity=0.223 Sum_probs=92.4
Q ss_pred CEEecccC-cCCccCccccCCCCCCCEEEccC-CCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEcc
Q 035786 145 NVLYLSGN-SLAGNVPATLGELKKLSNLDLSR-NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLS 222 (693)
Q Consensus 145 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 222 (693)
..++++++ .++ .+|. +..+++|++|+|++ |.|++..|..|..+++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688888 887 4788 99999999999996 99998888889999999999999999999888899999999999999
Q ss_pred CCcccccCCccccCCCCCCEEEccCCcCccc
Q 035786 223 DNALTGFIPSEVGNLDKLIELDLSKNSISGS 253 (693)
Q Consensus 223 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 253 (693)
+|+|++..+..|..++ |+.|+|.+|.+...
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 9999977666666665 99999999999854
No 402
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.17 E-value=8.6e-11 Score=119.20 Aligned_cols=146 Identities=12% Similarity=-0.028 Sum_probs=110.6
Q ss_pred HHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccc-cCHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEE
Q 035786 508 LRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHS-FKKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 508 ~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~-~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~l 585 (693)
......|......+.|+.+.||+.... |..+++|...... .....+.+|++++..++ |..+.++++++.. .+..|+
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-~~~~~l 87 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-DGWSNL 87 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-CCceEE
Confidence 344456766677888888999999864 6789999986422 22346889999999885 6677889888765 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccC------------------------------
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE------------------------------ 635 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~------------------------------ 635 (693)
||||+++.+|.+.+.. ......++.+++++++.||.-
T Consensus 88 v~e~i~G~~l~~~~~~-------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED-------------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVD 154 (263)
T ss_dssp EEECCSSEEHHHHCCT-------------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCS
T ss_pred EEEecCCeehhhccCC-------------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccc
Confidence 9999999998875311 112346888899999999971
Q ss_pred --------------------------CCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 636 --------------------------CNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 636 --------------------------~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
..+.++|+|+++.||+++++..+.|.||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 155 CENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999998755
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=1.4e-10 Score=117.05 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=96.8
Q ss_pred ccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCc--cceeEEEEcCCCeeEEEEccCCCCChh
Q 035786 519 LIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL--VPLLGQCLEHETEKLLVYKYMVCGDLA 596 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~ni--v~l~g~~~~~~~~~~lv~ey~~~GsL~ 596 (693)
+.+.|..+.||+....+|..++||..... ....+.+|++++..+++.++ .+++++... ++..++||||+++.+|.
T Consensus 27 ~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 27 QTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTE-AGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-SSCEEEEEECCSSEETT
T ss_pred cccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-CCCCEEEEEecCCcccC
Confidence 33456679999998888889999987543 23468889999999976554 457776654 35679999999998884
Q ss_pred hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC----------------------------------------
Q 035786 597 SSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC---------------------------------------- 636 (693)
Q Consensus 597 ~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~---------------------------------------- 636 (693)
... .+ +..++.++++.++.||...
T Consensus 104 --~~~-----------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 104 --SSH-----------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp --TSC-----------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred --cCc-----------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 211 11 2256677777777777531
Q ss_pred ---------------CCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 637 ---------------NPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 637 ---------------~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
.+.++|+|++|.||+++++..++|.||+.+...
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999988766789999997763
No 404
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.97 E-value=2.1e-09 Score=114.38 Aligned_cols=142 Identities=13% Similarity=0.158 Sum_probs=105.6
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEEec--cccc--CHHHHHHHHHHHhcCC--CCCccceeEEEEcCC--CeeEEEE
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKKVS--LHSF--KKESYMMELDLFSRVS--HARLVPLLGQCLEHE--TEKLLVY 587 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~--~~~~--~~~~f~~Ei~~l~~l~--H~niv~l~g~~~~~~--~~~~lv~ 587 (693)
..+.++.|.++.||+.+..+ ..+++|+.. .... ....+.+|.+++..++ +..+.+++++|.+.+ +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 34578999999999998765 578888775 3321 2456888999999997 455788888775431 2478999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-------------------------------
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC------------------------------- 636 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~------------------------------- 636 (693)
||+++..+.+.. ...++..++..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~~----------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (359)
T 3dxp_A 121 EFVSGRVLWDQS----------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSE 190 (359)
T ss_dssp ECCCCBCCCCTT----------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHC
T ss_pred EecCCeecCCCc----------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcC
Confidence 999998775321 123788889999999999999999720
Q ss_pred ------------------------CCCeEecCCCCCCeeeCCCCc--eEECCcccccc
Q 035786 637 ------------------------NPPLVHRDVQASSILLDDKFE--VRLGSLSELHA 668 (693)
Q Consensus 637 ------------------------~p~iiHrDlk~~NILld~~~~--~ki~Dfgla~~ 668 (693)
.+.++|+|+++.||+++++.. +.|.||+.+..
T Consensus 191 ~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 191 TESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997753 68999998775
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.89 E-value=4.6e-08 Score=105.32 Aligned_cols=248 Identities=12% Similarity=0.058 Sum_probs=113.0
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCc--------------
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNS-------------- 153 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-------------- 153 (693)
.+.+++.|+.+.+..+ + ..|++.-..++++|+.++|..+ ++..-...|.++++|+.+.+..+-
T Consensus 66 AF~~c~~L~~i~lp~~-i-~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPST-V-REIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCTT-C-CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCCC-c-cCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeeccccc
Confidence 3445566666666532 2 2344332334666666666543 333334455555555555443221
Q ss_pred -------CCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcc
Q 035786 154 -------LAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNAL 226 (693)
Q Consensus 154 -------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 226 (693)
....-...|.++++|+.+.+..+. ...-...|.++.+|+.+.+..| ++..-...+.++..|+.+.+..+..
T Consensus 143 ~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~ 220 (394)
T 4fs7_A 143 EITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLY 220 (394)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCC
T ss_pred ccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCce
Confidence 111112346666777777776543 2233445666667777766654 3322334455556666555544432
Q ss_pred cccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc-------------------ccCCCcccCCCC
Q 035786 227 TGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE-------------------GQLSEGLFPTLD 287 (693)
Q Consensus 227 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-------------------g~i~~~~~~~l~ 287 (693)
. +.+.....++|+.+.+..+ ++..-...+.++.+|+.+.+..+... ..++...|..+.
T Consensus 221 ~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~ 297 (394)
T 4fs7_A 221 Y--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCS 297 (394)
T ss_dssp E--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCT
T ss_pred E--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccc
Confidence 1 1222223334444444322 12122233444445555544443321 012333344445
Q ss_pred CCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 288 QLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 288 ~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
+|+.+.+..+ ++..-...|..+.+|+.++|.++ ++ .|+...+..+.+|+.+++..|
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 5555555433 33233334444555555555432 32 333334444455555555443
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=8.5e-10 Score=117.07 Aligned_cols=165 Identities=14% Similarity=0.154 Sum_probs=80.4
Q ss_pred ccccCCCCCEEEccCCCC---------CCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccC
Q 035786 88 SLGNLTLLSSFNASGLSL---------PGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNV 158 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l---------~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 158 (693)
++.++++|+.|.+..+.. .+.++..+. .+|+|+.|+|++|.-. .++. +. +++|+.|+|..|.+....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~-~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLD-AMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHH-TCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHh-cCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHH
Confidence 355677888887765432 123444443 3677777777766211 1222 22 556666666665554322
Q ss_pred ccccC--CCCCCCEEEccC--CCCCCcCchhhhcCcCCCeeecccccCCCcCcccc--cCCCCCCEEEccCCcccccCCc
Q 035786 159 PATLG--ELKKLSNLDLSR--NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGL--YSLSSIQFLNLSDNALTGFIPS 232 (693)
Q Consensus 159 p~~~~--~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~ 232 (693)
...+. .+++|++|+|+. |...+... + . .+...+ ..+++|+.|+|.+|.++...+.
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~~--~----------------~-~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDGD--M----------------N-VFRPLFSKDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCSC--G----------------G-GTGGGSCTTTCTTCCEEEEESCTTHHHHHH
T ss_pred HHHHHHccCCCCcEEEEeccccccccchh--H----------------H-HHHHHHhcCCCCCcCEEeCCCCCCchHHHH
Confidence 22222 456666666542 11111000 0 0 000011 2345666666666665432222
Q ss_pred cc---cCCCCCCEEEccCCcCccc----CchhhhcCcccccccccccccc
Q 035786 233 EV---GNLDKLIELDLSKNSISGS----LPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 233 ~~---~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
.+ ..+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++
T Consensus 271 ~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 22 2355666666666666543 2333345566677777766654
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=2.1e-09 Score=114.08 Aligned_cols=182 Identities=15% Similarity=0.136 Sum_probs=100.9
Q ss_pred CCCCccEEEecCCCCC---------cCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhh
Q 035786 116 RLPALQVLDLRSCSLS---------GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI 186 (693)
Q Consensus 116 ~l~~L~~L~Ls~n~l~---------g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 186 (693)
.+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.++......+
T Consensus 137 ~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l 213 (362)
T 2ra8_A 137 KFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDI 213 (362)
T ss_dssp HHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHH
T ss_pred hcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHH
Confidence 3788888888665331 112233345556666666555211 1222 22 4556666655555443222222
Q ss_pred h--cCcCCCeeeccc--ccCCCcCcccccCCCCCCEEEccCCcccccCCccc--cCCCCCCEEEccCCcCcccCchhhh-
Q 035786 187 S--LLGNLTRLNLAS--NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV--GNLDKLIELDLSKNSISGSLPLELR- 259 (693)
Q Consensus 187 ~--~l~~L~~L~Ls~--N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~- 259 (693)
. .+++|++|+|+. |...+.. . +.+ +...+ ..+++|++|+|++|.++...+..+.
T Consensus 214 ~~~~lp~L~~L~L~~~~~~~~~~~--~----------------~~~-l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~ 274 (362)
T 2ra8_A 214 LGSDLPNLEKLVLYVGVEDYGFDG--D----------------MNV-FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLE 274 (362)
T ss_dssp HHSBCTTCCEEEEECBCGGGTCCS--C----------------GGG-TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHH
T ss_pred HHccCCCCcEEEEeccccccccch--h----------------HHH-HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHh
Confidence 2 344555555432 1111100 0 000 01112 3578999999999999865544443
Q ss_pred --cCcccccccccccccccc----CCCcccCCCCCCCEEEccCCcCCCcCcccccC-CCCCCEEEccCCc
Q 035786 260 --GLRNLAKLVISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLDGALPATLFL-RPNLRFLDLSRNN 322 (693)
Q Consensus 260 --~l~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~-~~~L~~L~Ls~N~ 322 (693)
.+++|++|+|+.|.+++. ++..+ ..+++|+.|++++|.++...-..+.. + ...++++.|+
T Consensus 275 a~~~~~L~~LdLs~n~L~d~G~~~L~~~L-~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 275 SDILPQLETMDISAGVLTDEGARLLLDHV-DKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp CSSGGGCSEEECCSSCCBHHHHHHHHTTH-HHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CccCCCCCEEECCCCCCChHHHHHHHhhc-ccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 578999999999999763 33322 45789999999999987543322221 1 3457777776
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.80 E-value=1.4e-07 Score=101.52 Aligned_cols=246 Identities=13% Similarity=0.090 Sum_probs=151.4
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCC---------------------CCCcCCCcccCCCccCCE
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSC---------------------SLSGSIPGSFGNLSRLNV 146 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n---------------------~l~g~~p~~~~~l~~L~~ 146 (693)
.+.+++.|+.+++..+ + ..|++.....+++|+.+.+..+ .....-...|.++++|+.
T Consensus 89 aF~~c~~L~~i~lp~~-l-~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~ 166 (394)
T 4fs7_A 89 AFENCSKLEIINIPDS-V-KMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEY 166 (394)
T ss_dssp TTTTCTTCCEECCCTT-C-CEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCE
T ss_pred HhhCCCCCcEEEeCCC-c-eEccchhhcccccchhhcccCceeeecceeeecccccccccCccccccchhhhcccCCCcE
Confidence 4667788888877643 1 1233322223444444433321 111112345778888888
Q ss_pred EecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCC---------------------Cc
Q 035786 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT---------------------GQ 205 (693)
Q Consensus 147 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---------------------g~ 205 (693)
+.+..+. ...-...|.++++|+.+++..| ++..-...+.++..|+.+.+..+... ..
T Consensus 167 i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i 244 (394)
T 4fs7_A 167 VSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTEL 244 (394)
T ss_dssp EECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECTTCCEE
T ss_pred EecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEECCCceec
Confidence 8887553 3344556778888888888765 44333455666666666665544321 11
Q ss_pred CcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCC
Q 035786 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPT 285 (693)
Q Consensus 206 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~ 285 (693)
-...+..+.+|+.+.+..+..+ .....|..+..++.+....+.+ ....|..+.+|+.+.+.++ ++ .|++..|.+
T Consensus 245 ~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~ 318 (394)
T 4fs7_A 245 GKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VK-FIGEEAFES 318 (394)
T ss_dssp CSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CC-EECTTTTTT
T ss_pred ccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cc-eechhhhcC
Confidence 1123445555666665554332 3344556666666666555432 2345777888888888765 43 577778899
Q ss_pred CCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 286 LDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 286 l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
+.+|+.+++.++ ++..-..+|..+.+|+.+++..| ++ .++...+..+.+|+.+++..+
T Consensus 319 c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 319 CTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 999999999754 66555677888999999999877 55 566666777788888877655
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.77 E-value=4.4e-10 Score=113.49 Aligned_cols=20 Identities=10% Similarity=-0.139 Sum_probs=13.2
Q ss_pred CCCCcceeecC-C-CEeEEEcCC
Q 035786 51 CRSWRGVQCQN-G-QVIAINISG 71 (693)
Q Consensus 51 C~~W~gv~C~~-~-~v~~l~l~~ 71 (693)
| +|.|+.|+. + +|+.+..++
T Consensus 78 ~-~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 78 K-AVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp H-HTTSSCBCTTSCBCCCEEEEC
T ss_pred H-hcCcEEECCCCCEEEEEEecC
Confidence 5 799999973 3 565554443
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.67 E-value=9.4e-07 Score=95.01 Aligned_cols=262 Identities=12% Similarity=0.130 Sum_probs=119.8
Q ss_pred CCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCC---CCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCS---LSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~---l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
.|+.+.+..+ + ..|.+.-..++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++..-...|..+.+|+.
T Consensus 65 ~L~sI~iP~s-v-t~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~ 141 (394)
T 4gt6_A 65 VLTSVQIPDT-V-TEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDT 141 (394)
T ss_dssp CCCEEEECTT-C-CEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCE
T ss_pred cCEEEEECCC-e-eEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccc
Confidence 3666665432 1 23333322346777777776553 44333456666666766666543 33333445666666666
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCC--
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN-- 248 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N-- 248 (693)
+.+..+ +...-...+..+.+|+.+.+..+ ++ .+........+|+.+.+..+-. ..-...|.++.+|.......+
T Consensus 142 i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~ 217 (394)
T 4gt6_A 142 VTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFTGTALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESY 217 (394)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSS
T ss_pred ccccce-eeeecccceecccccccccccce-ee-EeccccccccceeEEEECCccc-ccccchhhhccccceeccccccc
Confidence 666543 22223344555555665555433 11 1111111223344444332211 111122222222222221111
Q ss_pred ----------------------------------cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEc
Q 035786 249 ----------------------------------SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDL 294 (693)
Q Consensus 249 ----------------------------------~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~L 294 (693)
.++..-...|.++.+|+.+.+.++.. .+....|.+++.|+.+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l 295 (394)
T 4gt6_A 218 PAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV--SIGTGAFMNCPALQDIEF 295 (394)
T ss_dssp CBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC--EECTTTTTTCTTCCEEEC
T ss_pred ccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc--eecCcccccccccccccC
Confidence 11111123455555666666554432 244455556666666666
Q ss_pred cCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCCc
Q 035786 295 SGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSNY 369 (693)
Q Consensus 295 s~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~ 369 (693)
. +.++..-...|..+.+|+.++|..+ ++ .|....+..+.+|+.+.+..+ +. .|.. ..+.+|+.+++++|.
T Consensus 296 ~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 296 S-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp C-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCH
T ss_pred C-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCce
Confidence 4 3344333444555566666666543 32 344444555566666665443 21 1222 334556666666554
No 411
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.51 E-value=9.1e-07 Score=90.75 Aligned_cols=146 Identities=16% Similarity=0.140 Sum_probs=95.4
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCC---CccceeEEEEcCCCeeEEEEccCC
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHA---RLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~---niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
..+.|+.|.++.||+.+..+|+.++||+...... ....|.+|++.|+.++|. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~-----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec-----CcEEEEEecc
Confidence 4567999999999999999999999999653322 246799999999999876 477777653 3589999999
Q ss_pred CCChhh-----------hhhccCCCC----CCC---------CCCCCHHHHHH---H------H-----------HHHHH
Q 035786 592 CGDLAS-----------SLHRVTDLE----DDS---------LQSLDWITRLK---I------A-----------IGAAE 627 (693)
Q Consensus 592 ~GsL~~-----------~l~~~~~~~----~~~---------~~~l~~~~r~~---i------a-----------~~ia~ 627 (693)
++.+.. -||...... ... .-.-+|..... + + ..+.+
T Consensus 94 g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~ 173 (288)
T 3d1u_A 94 ERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEK 173 (288)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 988632 234322100 000 00124543221 1 1 01112
Q ss_pred HHhhhc----cCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 628 GLSYLH----HECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 628 gl~yLH----~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
.++.+. ....|.++|+|+.+.||++++ ..+.|.|| .+..
T Consensus 174 l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~~ 216 (288)
T 3d1u_A 174 VLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAHG 216 (288)
T ss_dssp HHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCEE
T ss_pred HHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcCC
Confidence 222232 334678999999999999998 45889999 5443
No 412
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.50 E-value=2e-06 Score=92.44 Aligned_cols=272 Identities=11% Similarity=0.081 Sum_probs=157.3
Q ss_pred cccccCCCCCEEEccCCCC--CCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCC
Q 035786 87 DSLGNLTLLSSFNASGLSL--PGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGE 164 (693)
Q Consensus 87 ~~l~~L~~L~~L~ls~~~l--~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 164 (693)
..+.++++|+.+.+..+.- ...|++.-...+.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.+
T Consensus 81 ~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~ 158 (394)
T 4gt6_A 81 NAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSY 158 (394)
T ss_dssp TTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred HHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceec
Confidence 3567888999988865421 12344333334667776666543 44344556777788888877643 33344456677
Q ss_pred CCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccC---------------------
Q 035786 165 LKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD--------------------- 223 (693)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~--------------------- 223 (693)
+.+|+.+.+..+ ++..-..+|. ..+|+.+.+..+... .-...+..+.+|+......
T Consensus 159 c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T 4gt6_A 159 CYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYAL 235 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEE
T ss_pred ccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceecccccccccccceeecccccccccc
Confidence 777777777654 2212222232 244555555432211 1122233333333322211
Q ss_pred ---------------CcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCC
Q 035786 224 ---------------NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQ 288 (693)
Q Consensus 224 ---------------N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~ 288 (693)
+.++..-...|.++..|+.+.+..+..+ .-...|.++++|+.+.+.. .++ .|+...|.++.+
T Consensus 236 ~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~-~I~~~aF~~c~~ 312 (394)
T 4gt6_A 236 IRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RIT-ELPESVFAGCIS 312 (394)
T ss_dssp EECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCC-EECTTTTTTCTT
T ss_pred cccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccccCCC-ccc-ccCceeecCCCC
Confidence 1122222346778888998888765443 4456788888899888863 344 577788888999
Q ss_pred CCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCC
Q 035786 289 LQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSN 368 (693)
Q Consensus 289 L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N 368 (693)
|+.+++..+ ++..-...|..+.+|+.+.+..+ ++ .|+...+..+.+|+.+++.+|..... .......|+.+.+..|
T Consensus 313 L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~~~-~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 313 LKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQWN-AISTDSGLQNLPVAPG 388 (394)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHHHH-TCBCCCCC--------
T ss_pred cCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceeehh-hhhccCCCCEEEeCCC
Confidence 999999765 55455667888899999999755 54 56667778888999999988765321 1133456777777666
Q ss_pred cc
Q 035786 369 YF 370 (693)
Q Consensus 369 ~l 370 (693)
.+
T Consensus 389 ~~ 390 (394)
T 4gt6_A 389 SI 390 (394)
T ss_dssp --
T ss_pred CE
Confidence 54
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=2e-08 Score=101.36 Aligned_cols=78 Identities=28% Similarity=0.330 Sum_probs=35.4
Q ss_pred CcCCCeeecccccCCC--cCcccccCCCCCCEEEccCCcccccCCccccCCC--CCCEEEccCCcCcccCc-------hh
Q 035786 189 LGNLTRLNLASNFFTG--QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLD--KLIELDLSKNSISGSLP-------LE 257 (693)
Q Consensus 189 l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~g~~p-------~~ 257 (693)
+++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++. ..+..+. +|++|+|++|.+++.+| ..
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 3444444444444443 2233334444444444444444432 1222222 55666666666655443 22
Q ss_pred hhcCccccccc
Q 035786 258 LRGLRNLAKLV 268 (693)
Q Consensus 258 ~~~l~~L~~L~ 268 (693)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 44555555554
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.41 E-value=7.6e-07 Score=92.85 Aligned_cols=136 Identities=20% Similarity=0.256 Sum_probs=96.5
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCC---CC-ccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSH---AR-LVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H---~n-iv~l~g~~~~~~~~~~lv~e 588 (693)
.....+.++.|....||+. |..+++|...... ....+.+|.+++..+++ +- +.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ-----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec-----CCcEEEEe
Confidence 4556678999999999998 6678888763321 13458899999988876 22 3344433 34689999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC--------------------------------
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-------------------------------- 636 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-------------------------------- 636 (693)
|+++.++.+... ..++..++..++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~----------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (320)
T 3r70_A 108 YIKGERITYEQY----------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEK 177 (320)
T ss_dssp CCCCBCCCHHHH----------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCcccccccc----------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhh
Confidence 999988863321 12455566666666776666666321
Q ss_pred ----------------------------CCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 637 ----------------------------NPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 637 ----------------------------~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
.+.++|+|+++.||+++++..+.|.||+.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 178 EQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp TTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 23469999999999999876679999998765
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=5.3e-08 Score=93.15 Aligned_cols=89 Identities=16% Similarity=0.221 Sum_probs=39.3
Q ss_pred CCCCCCCEEEccCCCCCCc----CchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEc--cCCccccc---
Q 035786 163 GELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNL--SDNALTGF--- 229 (693)
Q Consensus 163 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L--s~N~l~g~--- 229 (693)
...++|++|+|++|.+... +...+...++|++|+|++|.++.. +...+...++|++|+| ++|.++..
T Consensus 62 ~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~ 141 (185)
T 1io0_A 62 KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM 141 (185)
T ss_dssp TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH
T ss_pred HhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH
Confidence 3344455555555544421 222333334455555555544421 2233344445555555 44554432
Q ss_pred -CCccccCCCCCCEEEccCCcCc
Q 035786 230 -IPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 230 -~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
+...+...++|++|+|++|.+.
T Consensus 142 ~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 142 EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCcCEEeccCCCCC
Confidence 1222333455555555555543
No 416
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.39 E-value=4.5e-07 Score=93.82 Aligned_cols=137 Identities=16% Similarity=0.162 Sum_probs=94.4
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCc--cceeEEEEcCC--CeeEEEEccCC
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARL--VPLLGQCLEHE--TEKLLVYKYMV 591 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~ni--v~l~g~~~~~~--~~~~lv~ey~~ 591 (693)
.+.++.|.+..||+.. ..++||.-... .....+.+|.+++..+. +..+ .+.++++...+ ...|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 3468999999999863 56888875432 22457889999998884 4333 34443322111 12479999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-------------------------------------
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH------------------------------------- 634 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~------------------------------------- 634 (693)
+.++.+... ..++..++..++.++++.++.||.
T Consensus 100 G~~l~~~~~----------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 100 GVPLTPLLL----------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp CEECCHHHH----------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred CeECCcccc----------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 988865322 125666677777777777777774
Q ss_pred ------------------CCCCCeEecCCCCCCeeeCC--CCceEECCcccccc
Q 035786 635 ------------------ECNPPLVHRDVQASSILLDD--KFEVRLGSLSELHA 668 (693)
Q Consensus 635 ------------------~~~p~iiHrDlk~~NILld~--~~~~ki~Dfgla~~ 668 (693)
...+.++|+|+++.||++++ ...+.|.||+.+..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 11246899999999999998 45688999998766
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.35 E-value=8.8e-08 Score=91.58 Aligned_cols=116 Identities=13% Similarity=0.136 Sum_probs=75.2
Q ss_pred ccccCCCCCCCEEEccCC-CCCCc----CchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCccccc
Q 035786 159 PATLGELKKLSNLDLSRN-LLTGE----IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNALTGF 229 (693)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~ 229 (693)
...+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345667788888888888 77642 344556677888888888888642 333445567788888888887643
Q ss_pred ----CCccccCCCCCCEEEc--cCCcCcccC----chhhhcCccccccccccccc
Q 035786 230 ----IPSEVGNLDKLIELDL--SKNSISGSL----PLELRGLRNLAKLVISENGL 274 (693)
Q Consensus 230 ----~p~~~~~l~~L~~L~L--s~N~l~g~~----p~~~~~l~~L~~L~Ls~N~l 274 (693)
+...+...++|++|+| ++|.++..- ...+...++|++|+|++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3445666677888888 677776432 23334445555555555554
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.32 E-value=2.5e-06 Score=88.33 Aligned_cols=136 Identities=12% Similarity=0.085 Sum_probs=88.6
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCC---CccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHA---RLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~---niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
..++.|....||+. |..++||.-. .......+.+|.++|..+++. .+.+.++++....+..++||||+++..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45788888899988 5678888742 122245788999999999753 255666666433456789999999988
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc----------------------------------------
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH---------------------------------------- 634 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~---------------------------------------- 634 (693)
+.+.... .++..++..++.++++.|+.||.
T Consensus 100 l~~~~~~----------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 100 LGEDGMA----------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CHHHHHT----------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred Cchhhhh----------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 7652110 12222223333333333333322
Q ss_pred -----------------CCCCCeEecCCCCCCeeeCC---CCc-eEECCcccccc
Q 035786 635 -----------------ECNPPLVHRDVQASSILLDD---KFE-VRLGSLSELHA 668 (693)
Q Consensus 635 -----------------~~~p~iiHrDlk~~NILld~---~~~-~ki~Dfgla~~ 668 (693)
...+.++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 13446899999999999997 455 48999998766
No 419
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.14 E-value=9.9e-05 Score=78.52 Aligned_cols=245 Identities=9% Similarity=0.027 Sum_probs=117.9
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+.++++|+.+++..+ + ..|++...... +|+.+.+..+ ++..-...|.+ .+|+.+.+..+ +...-...|.+. +
T Consensus 64 aF~~C~~L~~I~lp~~-v-~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~-~ 136 (379)
T 4h09_A 64 NFNSCYNMTKVTVAST-V-TSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNS-S 136 (379)
T ss_dssp TTTTCTTCCEEEECTT-C-CEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-C
T ss_pred HhhCCCCCCEEEeCCc-c-eEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-cccccccccccc-e
Confidence 4556666666666532 2 23433322223 4555555432 33222334443 35666666543 221222233332 3
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCC------------CcCcccccCCCCCCEEEccCCcccccCCcccc
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT------------GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG 235 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~------------g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 235 (693)
|+.+.+..+ ++..-...+..+.+++.+.+..+... ......+....++..+.+..+. .......+.
T Consensus 137 l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~ 214 (379)
T 4h09_A 137 VKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFS 214 (379)
T ss_dssp CCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTT
T ss_pred eeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeecccc
Confidence 444444332 22222344556666666655543221 1112223334445554443332 222334455
Q ss_pred CCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCE
Q 035786 236 NLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF 315 (693)
Q Consensus 236 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~ 315 (693)
...+|+.+.+..+ ++......+.++.+|+.+.+..+ ++ .+....|.++.+|+.+.+..+ ++..-...|..+++|+.
T Consensus 215 ~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 215 YGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTK 290 (379)
T ss_dssp TCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCE
T ss_pred cccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccccccc
Confidence 5566666665443 33233445556666666666554 22 345555666666666666443 33333445556666666
Q ss_pred EEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 316 LDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 316 L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
+++.++.++ .|+...+..+.+|+.+++.++
T Consensus 291 i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 291 VVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EEECCTTCC-EECTTTTTTCTTCCEEECCTT
T ss_pred ccccccccc-eehhhhhcCCCCCCEEEcCcc
Confidence 666666665 444455556666666666544
No 420
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.13 E-value=8.4e-06 Score=86.43 Aligned_cols=148 Identities=15% Similarity=0.144 Sum_probs=92.3
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCC--ccceeEEEEcCCCeeEEEEccCCCC
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR--LVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
....++.|....+|+.+. +|..++||.-... ..+.+|.+++..+.... +.++++++...++..++||||+++.
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 455688999999999886 5788999976432 35888999998887544 4566766654335679999999986
Q ss_pred Chhhh------------------hhccCCCC---------CCC---------------CCCCCHHHHH------HHHHHH
Q 035786 594 DLASS------------------LHRVTDLE---------DDS---------------LQSLDWITRL------KIAIGA 625 (693)
Q Consensus 594 sL~~~------------------l~~~~~~~---------~~~---------------~~~l~~~~r~------~ia~~i 625 (693)
.+.+. ||...... ... ...-.|..++ .....+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 66421 12211000 000 0111333211 111112
Q ss_pred HHHHhhhccC-CCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 626 AEGLSYLHHE-CNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 626 a~gl~yLH~~-~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
..-..++... ..|.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 2222333221 126789999999999998877788999998766
No 421
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.05 E-value=0.00023 Score=75.57 Aligned_cols=262 Identities=14% Similarity=0.112 Sum_probs=167.2
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
.-.+|+.+.+... + ..|++.-..++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ +...-...|.. .+|+.
T Consensus 44 ~~~~i~~v~ip~~-v-t~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~ 117 (379)
T 4h09_A 44 DRDRISEVRVNSG-I-TSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDD 117 (379)
T ss_dssp GGGGCSEEEECTT-E-EEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSE
T ss_pred cccCCEEEEeCCC-c-cChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCccc
Confidence 3445666655432 1 2355443346899999999754 665556678776 6777777643 44333445554 47999
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccc------------cCCccccCCC
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTG------------FIPSEVGNLD 238 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g------------~~p~~~~~l~ 238 (693)
+++..+. +..-...|.+ .+|+.+.+..+ ++..-...+..+.+++.+.+..+.... .....+....
T Consensus 118 i~lp~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 118 FEFPGAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp EECCTTC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred ccCCCcc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 9987653 3222333443 35666665543 333344567788888888877654321 1122344455
Q ss_pred CCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEc
Q 035786 239 KLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDL 318 (693)
Q Consensus 239 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~L 318 (693)
.+..+.+..+. .......+....+|+.+.+..+- . .+....|..+..|+.+.+..+ ++..-...+..+.+|+.+.+
T Consensus 195 ~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~~-~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 195 TGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSGV-T-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp CCSEEECCTTC-CEECTTTTTTCSSCSEEECCTTC-C-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccccccccce-eEEeecccccccccceeeeccce-e-EEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 56666554432 22344567777888888886652 2 466667888999999999876 55555667788899999999
Q ss_pred cCCcCcccCCccCcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCC
Q 035786 319 SRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSN 368 (693)
Q Consensus 319 s~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N 368 (693)
..+ ++ .++...+..+.+|+.+++.++.+.- |+. ..+.+|+.++|..+
T Consensus 271 ~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~-I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 271 YAK-VK-TVPYLLCSGCSNLTKVVMDNSAIET-LEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CCC-CS-EECTTTTTTCTTCCEEEECCTTCCE-ECTTTTTTCTTCCEEECCTT
T ss_pred ccc-ce-eccccccccccccccccccccccce-ehhhhhcCCCCCCEEEcCcc
Confidence 765 44 5666677888999999999887753 333 44567899988754
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.01 E-value=1.1e-05 Score=85.31 Aligned_cols=80 Identities=8% Similarity=-0.005 Sum_probs=55.5
Q ss_pred Ccc-ccCCeeeEEEEEeC-------CCcEEEEEEecccc---c-CHHHHHHHHHHHhcCCC---CCccceeEEEEcCC--
Q 035786 518 NLI-KKGHSGDLFKGTLA-------GGTTVVVKKVSLHS---F-KKESYMMELDLFSRVSH---ARLVPLLGQCLEHE-- 580 (693)
Q Consensus 518 ~~i-g~G~~G~Vy~~~~~-------~g~~vavK~l~~~~---~-~~~~f~~Ei~~l~~l~H---~niv~l~g~~~~~~-- 580 (693)
+.| +.|....+|+.... ++..+++|.-.... . ....+.+|++++..++. -.+.++++++.+..
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88999999998765 26788898765432 1 12457889988888853 24667777764321
Q ss_pred CeeEEEEccCCCCChhh
Q 035786 581 TEKLLVYKYMVCGDLAS 597 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~ 597 (693)
...++||||+++..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 24689999999877654
No 423
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.97 E-value=3.2e-05 Score=78.06 Aligned_cols=135 Identities=12% Similarity=0.037 Sum_probs=88.3
Q ss_pred ccccCCee-eEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 519 LIKKGHSG-DLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 519 ~ig~G~~G-~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
.+..|..| .||+-... ++..+.||+-... ...++.+|.+.|..+. +--+-++++++.+ ++..++||||+++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-PDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-CCeEEEEEEeeCCccc
Confidence 35556666 69998764 5678999986432 2456888999988774 3335677887765 4678999999999877
Q ss_pred hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccC----------------------------------------
Q 035786 596 ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE---------------------------------------- 635 (693)
Q Consensus 596 ~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~---------------------------------------- 635 (693)
.+..... ...+..++.++++.|+-||.-
T Consensus 108 ~~~~~~~------------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 108 FQVLEEY------------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp HHHHHHC------------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred cccccCC------------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 6543210 001122333333333333321
Q ss_pred ---------------CCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 636 ---------------CNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 636 ---------------~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
..+.++|+|+.+.||+++++..+-|.||+.+..
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 122389999999999999887777999988765
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.75 E-value=6.2e-05 Score=78.64 Aligned_cols=147 Identities=14% Similarity=0.202 Sum_probs=81.5
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCC-----CCCcccee-E-EEEcCCCeeEEEEccC
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-----HARLVPLL-G-QCLEHETEKLLVYKYM 590 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-----H~niv~l~-g-~~~~~~~~~~lv~ey~ 590 (693)
..|+.|..+.||+....+| .+++|+.... .++...|.+++..++ .|.++.-. | ++...++..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 3466677899999987655 4889988642 233444555554442 34444310 1 1111134678999999
Q ss_pred CCCChh--------------hhhhccCCCC---CC---CCCCCCHHHHHH------------------------------
Q 035786 591 VCGDLA--------------SSLHRVTDLE---DD---SLQSLDWITRLK------------------------------ 620 (693)
Q Consensus 591 ~~GsL~--------------~~l~~~~~~~---~~---~~~~l~~~~r~~------------------------------ 620 (693)
++..+. ..+|...... .. ....-.|.....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 987653 1223211100 00 011234543211
Q ss_pred -HHHHHHHHHhhhcc----------CCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 621 -IAIGAAEGLSYLHH----------ECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 621 -ia~~ia~gl~yLH~----------~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
+...+.+++++|+. ...+.++|+|+++.||+++.+..+.|.||+.+..
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11123345667763 1245899999999999998888899999998754
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.69 E-value=0.00013 Score=78.10 Aligned_cols=74 Identities=12% Similarity=0.101 Sum_probs=49.1
Q ss_pred cCccccCCeeeEEEEEeC-CCcEEEEEEecccc--------cCHHHHHHHHHHHhcCCC--CCcc-ceeEEEEcCCCeeE
Q 035786 517 TNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS--------FKKESYMMELDLFSRVSH--ARLV-PLLGQCLEHETEKL 584 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~--------~~~~~f~~Ei~~l~~l~H--~niv-~l~g~~~~~~~~~~ 584 (693)
.+.||.|.++.||+++.. +++.|+||...... ...+.+..|.+++..++. +..| +++.+ +. ...+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~-~~~~ 111 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DT-EMAV 111 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ET-TTTE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cC-CccE
Confidence 457899999999999864 46889999764321 123457789999887743 3444 45433 32 3568
Q ss_pred EEEccCCCC
Q 035786 585 LVYKYMVCG 593 (693)
Q Consensus 585 lv~ey~~~G 593 (693)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999864
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.55 E-value=0.00044 Score=70.49 Aligned_cols=78 Identities=14% Similarity=0.166 Sum_probs=55.7
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCC---CccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHA---RLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~---niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.....+|.|..+.||+.++.||+.|.||+-...... ...|.+|.+.|..+.-. -+.+.++ .+ ..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~--~~---~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAG--WD---DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEE--EE---TTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEe--cc---CceEEEEe
Confidence 3445678999999999999999999999986543322 34688899998887422 2344443 32 24789999
Q ss_pred CCCCChh
Q 035786 590 MVCGDLA 596 (693)
Q Consensus 590 ~~~GsL~ 596 (693)
++.+...
T Consensus 92 l~~~~~~ 98 (288)
T 3f7w_A 92 VDERPPT 98 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9877643
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.47 E-value=4e-05 Score=71.71 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=39.6
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCc-CCccCccccCCC----CCCCEEEccCCC-CCCcCchhhhcCcCC
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNS-LAGNVPATLGEL----KKLSNLDLSRNL-LTGEIPNAISLLGNL 192 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 192 (693)
.|+.|||++|.++..--..+.++++|+.|+|++|. ++..--..+..+ ++|++|+|++|. +|..-=..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 56777777766654333344556666666666653 332222223332 245555555543 442211233444455
Q ss_pred Ceeecccc
Q 035786 193 TRLNLASN 200 (693)
Q Consensus 193 ~~L~Ls~N 200 (693)
++|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555444
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.45 E-value=6.2e-05 Score=70.41 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=47.4
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCC-CCCcCchhhhcC----cCCCeeeccccc-CCCcCcccccCCCC
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-LTGEIPNAISLL----GNLTRLNLASNF-FTGQIPSGLYSLSS 215 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 215 (693)
-+|+.|||+++.++..--..+.++++|++|+|++|. ++..-=..+..+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 368888888888765544556778888888888874 553322233332 256666666653 44321122334445
Q ss_pred CCEEEccCC
Q 035786 216 IQFLNLSDN 224 (693)
Q Consensus 216 L~~L~Ls~N 224 (693)
|+.|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555554444
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.34 E-value=0.0021 Score=66.17 Aligned_cols=144 Identities=13% Similarity=0.150 Sum_probs=93.0
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCC---CCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS---HARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
....|+.|.+..+|+... ++..++||.-... ....|.+|.+.|..+. ...+.+.++++.. ++..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-QGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-SSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-CCceEEEEEeccC
Confidence 345689999999999986 4667888976532 2556888998888874 2557788887754 3578999999999
Q ss_pred CChhh-----------hhhccCCCCCCC--------------CCCCCHHHHH---HH--HHH--------------HH-H
Q 035786 593 GDLAS-----------SLHRVTDLEDDS--------------LQSLDWITRL---KI--AIG--------------AA-E 627 (693)
Q Consensus 593 GsL~~-----------~l~~~~~~~~~~--------------~~~l~~~~r~---~i--a~~--------------ia-~ 627 (693)
..+.. -||........+ .-.-+|.... ++ ..+ +. +
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 87532 334322100000 0012575432 11 111 11 1
Q ss_pred HHhhhc-cCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 628 GLSYLH-HECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 628 gl~yLH-~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
-...|. ....|.+||+|+.+.||+++.++ +.|.|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123343 23467899999999999999887 8899984
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.17 E-value=0.0015 Score=70.45 Aligned_cols=72 Identities=11% Similarity=0.073 Sum_probs=44.1
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecc-------c-cc--CHHHHHHHHHHHh-cCCCCCccceeEEEEcCCCeeEE
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSL-------H-SF--KKESYMMELDLFS-RVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~-------~-~~--~~~~f~~Ei~~l~-~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.+.+|.|....||+... ++..++||.... . .. .+..+..|+..+. ...+..+.+++++. +...++
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~---~~~~~l 114 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD---RTMALI 114 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE---TTTTEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC---CCccEE
Confidence 45689999999999975 467899994321 1 11 2333444443332 22234456666544 346789
Q ss_pred EEccC-CC
Q 035786 586 VYKYM-VC 592 (693)
Q Consensus 586 v~ey~-~~ 592 (693)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.11 E-value=0.00089 Score=69.25 Aligned_cols=166 Identities=11% Similarity=0.062 Sum_probs=90.4
Q ss_pred ccCHHHHHHHhCCCCc-----cCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCC--cccee
Q 035786 501 SFTYEQLLRATGNFSE-----TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR--LVPLL 573 (693)
Q Consensus 501 ~~~~~~l~~at~~~~~-----~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~ 573 (693)
.++.+++......|.. .+.|+.|....+|+....+| .+++|..... ...+++..|++++..++... +.+++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4566676666665654 23466788889999987766 6788887642 12334666777777664222 22332
Q ss_pred EE-----EEcCCCeeEEEEccCCCCChhh--------------hhhccCCCCCCC----CCCCCHHHHHHHH--------
Q 035786 574 GQ-----CLEHETEKLLVYKYMVCGDLAS--------------SLHRVTDLEDDS----LQSLDWITRLKIA-------- 622 (693)
Q Consensus 574 g~-----~~~~~~~~~lv~ey~~~GsL~~--------------~l~~~~~~~~~~----~~~l~~~~r~~ia-------- 622 (693)
.. +...++..++|+||+++..+.. -+|......... .....|..+..-+
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 11 0011245689999999865432 123211100000 0112354422111
Q ss_pred ----HHHHHHHhhhccC----CCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 623 ----IGAAEGLSYLHHE----CNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 623 ----~~ia~gl~yLH~~----~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
..+.+.+++++.. ..+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 1133445555421 234689999999999999876668999987654
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.06 E-value=0.0033 Score=65.08 Aligned_cols=147 Identities=12% Similarity=0.101 Sum_probs=82.7
Q ss_pred ccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCC--ccceeEE----EEcCCCeeEEEEccCCC
Q 035786 519 LIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR--LVPLLGQ----CLEHETEKLLVYKYMVC 592 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~g~----~~~~~~~~~lv~ey~~~ 592 (693)
.++ |....||+....+|+.+++|.........+.+..|.+++..++... +.+++.. ....++..++||||+++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 466 7788999988877888999998644334556777888887774222 3444432 00112456789999998
Q ss_pred CChhh--------------hhhccCC-CCCCCCCCCCHHHHH----HH---------------HHHHHHHHhhhcc----
Q 035786 593 GDLAS--------------SLHRVTD-LEDDSLQSLDWITRL----KI---------------AIGAAEGLSYLHH---- 634 (693)
Q Consensus 593 GsL~~--------------~l~~~~~-~~~~~~~~l~~~~r~----~i---------------a~~ia~gl~yLH~---- 634 (693)
..+.. -+|.... .........+|.... .+ ...+.+.++.+..
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 55431 1222111 000011123332210 00 0011111222221
Q ss_pred CCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 635 ECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 635 ~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
...+.++|+|+++.||+++ + .+.|.||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1234579999999999999 5 899999987665
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.86 E-value=0.0028 Score=64.93 Aligned_cols=71 Identities=10% Similarity=0.068 Sum_probs=43.3
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCcc-ceeEEEEcCCCeeEEEEccC-CCCC
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLV-PLLGQCLEHETEKLLVYKYM-VCGD 594 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~lv~ey~-~~Gs 594 (693)
.+.|+.|....+|+. ..+++|.-........+..+|.+++..++...+. +++++ + ...-++|+||+ ++-+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~-~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--D-PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--C-TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--E-CCCCEEEEeecCCCcc
Confidence 467888999999998 5688887754322211234577777766533343 44443 2 23457899999 5544
Q ss_pred h
Q 035786 595 L 595 (693)
Q Consensus 595 L 595 (693)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.72 E-value=0.0007 Score=64.48 Aligned_cols=89 Identities=18% Similarity=0.235 Sum_probs=40.3
Q ss_pred cCCCCCCCEEEccCCCCCCc----CchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCc---ccc--
Q 035786 162 LGELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNA---LTG-- 228 (693)
Q Consensus 162 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~---l~g-- 228 (693)
+..-+.|+.|+|++|.+... +...+..-+.|+.|+|++|.++.. +-..+..-+.|+.|+|++|. +..
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 33344455555555555421 223333444555555555555421 12223334456666665432 221
Q ss_pred --cCCccccCCCCCCEEEccCCcC
Q 035786 229 --FIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 229 --~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
.+.+.+..-+.|+.|+++.|.+
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHhCCCcCeEeccCCCc
Confidence 1222333445566666665543
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.64 E-value=0.00068 Score=64.54 Aligned_cols=112 Identities=13% Similarity=0.180 Sum_probs=66.3
Q ss_pred cCCCCCCCEEEccCC-CCCCc----CchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCccccc---
Q 035786 162 LGELKKLSNLDLSRN-LLTGE----IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNALTGF--- 229 (693)
Q Consensus 162 ~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~--- 229 (693)
+.+-+.|++|+|++| .+... +-..+..-+.|+.|+|++|.+... +-..+..-+.|+.|+|+.|.|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 345567778888775 66422 344556667888888888888632 233344557788888888887642
Q ss_pred -CCccccCCCCCCEEEccCC---cCccc----CchhhhcCcccccccccccc
Q 035786 230 -IPSEVGNLDKLIELDLSKN---SISGS----LPLELRGLRNLAKLVISENG 273 (693)
Q Consensus 230 -~p~~~~~l~~L~~L~Ls~N---~l~g~----~p~~~~~l~~L~~L~Ls~N~ 273 (693)
+-+.+..-+.|++|+|++| .+... +...+..-+.|+.|+++.|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 2234455566888888754 23321 22334444555555555443
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.55 E-value=0.012 Score=60.96 Aligned_cols=145 Identities=14% Similarity=0.065 Sum_probs=72.2
Q ss_pred ccccCCeee-EEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCC--CccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 519 LIKKGHSGD-LFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHA--RLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 519 ~ig~G~~G~-Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~--niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
.++.|.... +|+.+..+|..+++|...... .+++..|++++..++.. .+.+++.++. +. -++|||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~-g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEH--AR-GLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEET--TT-TEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecC--CC-CEEEEeeCCCcch
Confidence 455554444 678776556777777654322 12344566666665422 2445665532 22 3789999987666
Q ss_pred hhhhhccCC------------------CCCCCCCCCCHH----------H-----HH-----HHHHHHHHHHhhhc---c
Q 035786 596 ASSLHRVTD------------------LEDDSLQSLDWI----------T-----RL-----KIAIGAAEGLSYLH---H 634 (693)
Q Consensus 596 ~~~l~~~~~------------------~~~~~~~~l~~~----------~-----r~-----~ia~~ia~gl~yLH---~ 634 (693)
.+++..... .........+.. . ++ .....+.+.++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 554432100 000000011111 0 00 00001111222221 1
Q ss_pred CCCCCeEecCCCCCCeeeCCC----CceEECCcccccc
Q 035786 635 ECNPPLVHRDVQASSILLDDK----FEVRLGSLSELHA 668 (693)
Q Consensus 635 ~~~p~iiHrDlk~~NILld~~----~~~ki~Dfgla~~ 668 (693)
...+.++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123479999999999999875 6789999988765
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.30 E-value=0.0061 Score=65.80 Aligned_cols=72 Identities=22% Similarity=0.202 Sum_probs=49.0
Q ss_pred CccccCCeeeEEEEEeCC--------CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCc-cceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTLAG--------GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL-VPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~--------g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~e 588 (693)
+.|+.|-...||+...++ +..|.+|+.... ...+.+.+|.+++..+...++ .++++.+ . + .+|||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~-~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIF-S--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-T--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-C--C--CEEEE
Confidence 457788889999999763 468889887321 112567789999888854444 4566543 2 2 38999
Q ss_pred cCCCCCh
Q 035786 589 YMVCGDL 595 (693)
Q Consensus 589 y~~~GsL 595 (693)
|+++.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986444
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.14 E-value=0.0062 Score=53.91 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=17.7
Q ss_pred CCEEecccCcCCccCccccCCCCCCCEEEccCCCC
Q 035786 144 LNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLL 178 (693)
Q Consensus 144 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 178 (693)
|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444443344455555555555555554
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.09 E-value=0.0094 Score=52.75 Aligned_cols=36 Identities=28% Similarity=0.311 Sum_probs=20.2
Q ss_pred CCCEEEccCCCCCCcCchhhhcCcCCCeeecccccC
Q 035786 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 202 (693)
+|++|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 455666666666544444455555666666665554
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.09 E-value=0.015 Score=63.15 Aligned_cols=73 Identities=10% Similarity=0.001 Sum_probs=46.9
Q ss_pred CccccCCeeeEEEEEeCC-CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCcc-ceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 518 NLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLV-PLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
..|+.|-...+|+....+ +..+++|.........-+-.+|.+++..+...+++ ++++++ . + .+||||+++..|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~-~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF-T--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE-T--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe-C--C--eEEEEeeCCccC
Confidence 457888889999999875 57888887643321111124788888888765554 566544 2 2 259999997555
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.91 E-value=0.0071 Score=63.81 Aligned_cols=73 Identities=18% Similarity=0.245 Sum_probs=43.1
Q ss_pred CccccCCeeeEEEEEeCC---------CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCcc-ceeEEEEcCCCeeEEEE
Q 035786 518 NLIKKGHSGDLFKGTLAG---------GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLV-PLLGQCLEHETEKLLVY 587 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~---------g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~lv~ 587 (693)
..++.|..-.+|+....+ +..+++|.-........+...|.+++..+....++ ++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~---~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N---GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T---TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C---CcEEE
Confidence 356778888999998764 26788887644322111235688888777544444 555432 2 26899
Q ss_pred ccCCCCCh
Q 035786 588 KYMVCGDL 595 (693)
Q Consensus 588 ey~~~GsL 595 (693)
||+++..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99997544
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.77 E-value=0.027 Score=59.51 Aligned_cols=142 Identities=17% Similarity=0.158 Sum_probs=80.2
Q ss_pred ccccCCeeeEEEEEeCC--------CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCc-cceeEEEEcCCCeeEEEEcc
Q 035786 519 LIKKGHSGDLFKGTLAG--------GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL-VPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~--------g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~ey 589 (693)
.+..|-...+|+.+.++ +..|.+|+-...........+|.++++.+.-..+ .++++++ . + -+||||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~--~-~--g~v~e~ 131 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVF--P-E--GRLEQY 131 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEE--T-T--EEEEEC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEc--C-C--ccEEEE
Confidence 46667778899998753 4689999864322335567789999887753333 4555443 2 2 289999
Q ss_pred CCCCChhhh-----------------hhccCCCCCCCCCCCC--HHHHHHHHHHHH-------------------HHHhh
Q 035786 590 MVCGDLASS-----------------LHRVTDLEDDSLQSLD--WITRLKIAIGAA-------------------EGLSY 631 (693)
Q Consensus 590 ~~~GsL~~~-----------------l~~~~~~~~~~~~~l~--~~~r~~ia~~ia-------------------~gl~y 631 (693)
+++..|..- ||..... ...... |.+..++..++. +.+..
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~---~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMP---FTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCS---SCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCC---CCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 998665421 1211110 011223 333333332221 11222
Q ss_pred h----cc-CCCCCeEecCCCCCCeeeCCC----CceEECCcccccc
Q 035786 632 L----HH-ECNPPLVHRDVQASSILLDDK----FEVRLGSLSELHA 668 (693)
Q Consensus 632 L----H~-~~~p~iiHrDlk~~NILld~~----~~~ki~Dfgla~~ 668 (693)
| .. .....++|+|+.+.||+++++ ..+.|.||..+..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 21 223468999999999999876 7899999987664
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.11 E-value=0.16 Score=52.61 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=27.8
Q ss_pred CCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 637 NPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 637 ~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
.+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999977655
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.05 E-value=0.22 Score=52.74 Aligned_cols=143 Identities=20% Similarity=0.212 Sum_probs=79.7
Q ss_pred CccccCCeeeEEEEEeCC--------CcEEEEEEeccccc------------CHH-------HHHHHHHHHhcCCCCCc-
Q 035786 518 NLIKKGHSGDLFKGTLAG--------GTTVVVKKVSLHSF------------KKE-------SYMMELDLFSRVSHARL- 569 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~--------g~~vavK~l~~~~~------------~~~-------~f~~Ei~~l~~l~H~ni- 569 (693)
+.|..|-...+|+...++ +..|.++....... .++ ....|.+++..+....+
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346667788999998764 36788887643221 111 22358888888854444
Q ss_pred cceeEEEEcCCCeeEEEEccCCCCChhh--h---------------hhccCCCCCCCCCCCCH--HHHHHHHHHHH----
Q 035786 570 VPLLGQCLEHETEKLLVYKYMVCGDLAS--S---------------LHRVTDLEDDSLQSLDW--ITRLKIAIGAA---- 626 (693)
Q Consensus 570 v~l~g~~~~~~~~~~lv~ey~~~GsL~~--~---------------l~~~~~~~~~~~~~l~~--~~r~~ia~~ia---- 626 (693)
.++++++ + +. +|+||+++-.|.. + +|.... .......| .+..++..++.
T Consensus 138 Pkl~~~~-~--~G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~---~~~~~~~~l~~~i~~~~~~l~~~~~ 209 (401)
T 3f2s_A 138 PKLYGIF-P--QG--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKM---PFNKEPKWLFGTMEKYLKEVLRIKF 209 (401)
T ss_dssp CCEEEEE-T--TE--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCC---SSCCSCCHHHHHHHHHHHHHHHCCC
T ss_pred CeEEEEe-C--CC--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCC---CCCCCcchHHHHHHHHHHHHHhccC
Confidence 4565543 2 22 8999999755432 1 111110 00122332 23222322211
Q ss_pred ------------------HHH----hhhccC-CCCCeEecCCCCCCeeeCCC------CceEECCcccccc
Q 035786 627 ------------------EGL----SYLHHE-CNPPLVHRDVQASSILLDDK------FEVRLGSLSELHA 668 (693)
Q Consensus 627 ------------------~gl----~yLH~~-~~p~iiHrDlk~~NILld~~------~~~ki~Dfgla~~ 668 (693)
.-+ .+|... ....++|+|+.+.||+++++ ..+.+.||-.|..
T Consensus 210 ~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 210 TEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred cchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 23468899999999999887 7899999977654
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.56 E-value=0.14 Score=54.86 Aligned_cols=73 Identities=16% Similarity=0.211 Sum_probs=46.3
Q ss_pred CccccCCeeeEEEEEeCC--------CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCc-cceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTLAG--------GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL-VPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~--------g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~e 588 (693)
+.+..|-...+|+...++ +..+++|+-.......-+-.+|.+++..+.-..+ .++++.+ . -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~---~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P---EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T---TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C---CCEEEE
Confidence 346667788999998763 5788888864432221123468888877753334 3444422 2 278999
Q ss_pred cCCCCCh
Q 035786 589 YMVCGDL 595 (693)
Q Consensus 589 y~~~GsL 595 (693)
|+++..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998664
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.45 E-value=0.25 Score=34.10 Aligned_cols=26 Identities=27% Similarity=0.511 Sum_probs=14.1
Q ss_pred eeehhhHhHHHHHHHHHHHHHHHhhh
Q 035786 438 FILVGVFGGLGFIAILVIVLVLILRR 463 (693)
Q Consensus 438 ~i~~~~~~~~~~~~~~~~~~~~~~~~ 463 (693)
.|+++++++++++++++..+++++||
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 35666666666555555444444443
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=90.05 E-value=0.2 Score=34.43 Aligned_cols=26 Identities=35% Similarity=0.660 Sum_probs=13.7
Q ss_pred eeehhhHhHHHHHHHHHHHHHHHhhh
Q 035786 438 FILVGVFGGLGFIAILVIVLVLILRR 463 (693)
Q Consensus 438 ~i~~~~~~~~~~~~~~~~~~~~~~~~ 463 (693)
.|+++++++++++++++..+++++||
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhh
Confidence 35566666665555554444444443
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.81 E-value=0.081 Score=57.48 Aligned_cols=57 Identities=7% Similarity=-0.038 Sum_probs=16.6
Q ss_pred CccccCCeeeEEEEEeCC-CcEEEE------EEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEE
Q 035786 518 NLIKKGHSGDLFKGTLAG-GTTVVV------KKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCL 577 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~-g~~vav------K~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~ 577 (693)
+.+| ||.||+|.+.. ..+||| |+...+... ..+|.+|..++.+.+|||+++..++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3465 99999999864 368999 776543322 346899999999999999999988764
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=77.25 E-value=5.9 Score=41.70 Aligned_cols=29 Identities=28% Similarity=0.336 Sum_probs=24.1
Q ss_pred eEecCCCCCCeee------CCCCceEECCcccccc
Q 035786 640 LVHRDVQASSILL------DDKFEVRLGSLSELHA 668 (693)
Q Consensus 640 iiHrDlk~~NILl------d~~~~~ki~Dfgla~~ 668 (693)
++|+|+.+.||++ +++..+++.||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4567799999977655
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=66.85 E-value=19 Score=34.09 Aligned_cols=88 Identities=5% Similarity=-0.078 Sum_probs=61.7
Q ss_pred CCCCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEec
Q 035786 564 VSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHR 643 (693)
Q Consensus 564 l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHr 643 (693)
..||+.++.- ..+.++...+.|+- ..+...|-. .+.++-..|++++..|+.--.+++.. +|-
T Consensus 42 ~~~~~Fl~~~--I~e~eD~v~~~y~~--~~~~~~f~~---------ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf 103 (215)
T 4ann_A 42 QHSPYFIDAE--LTELRDSFQIHYDI--NDNHTPFDN---------IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTF 103 (215)
T ss_dssp SCCTTBCCEE--EEECSSEEEEEECC--CTTSEEGGG---------GGGSCHHHHHHHHHHGGGGGGGGGSS-----EEC
T ss_pred ccCCcccceE--EEEcccEEEEEEEc--CcccCCHHH---------HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEE
Confidence 4688888763 22333444444443 333333322 13478899999999999988877754 677
Q ss_pred CCCCCCeeeCCCCceEECCccccccc
Q 035786 644 DVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 644 Dlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
-+.|.||.+|.++.|++.=.|+-..+
T Consensus 104 ~L~P~NL~f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 104 VLAPDELFFTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp CCSGGGEEECTTSCEEESCCEETTTB
T ss_pred EEecceEEEcCCCCEEEEEccCccCC
Confidence 88999999999999999999985544
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=57.99 E-value=21 Score=33.98 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHHHHHh-hhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 612 SLDWITRLKIAIGAAEGLS-YLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 612 ~l~~~~r~~ia~~ia~gl~-yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
.++-..|++++..++.-.. +++.. +|--+.|.||.+|.++.|++.=.|+-..+
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHVGVKESL 134 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCCEETTTB
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEcCCcccC
Confidence 3788999999999998777 66643 67778899999999999999999985544
No 452
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=48.88 E-value=5.6 Score=26.75 Aligned_cols=13 Identities=23% Similarity=0.376 Sum_probs=6.1
Q ss_pred eeehhhHhHHHHH
Q 035786 438 FILVGVFGGLGFI 450 (693)
Q Consensus 438 ~i~~~~~~~~~~~ 450 (693)
.++++++++++++
T Consensus 14 ~I~~~vv~Gv~ll 26 (41)
T 2k9y_A 14 AVIGGVAVGVVLL 26 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEEeehhHHHHHH
Confidence 3444555554443
No 453
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=31.40 E-value=49 Score=23.72 Aligned_cols=17 Identities=53% Similarity=0.989 Sum_probs=8.2
Q ss_pred eeeehhhHhHHHHHHHH
Q 035786 437 IFILVGVFGGLGFIAIL 453 (693)
Q Consensus 437 ~~i~~~~~~~~~~~~~~ 453 (693)
.++++++++++.+++++
T Consensus 13 wiIi~svl~GLllL~li 29 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTIL 29 (54)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34455555555444433
No 454
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=31.13 E-value=11 Score=24.36 Aligned_cols=6 Identities=33% Similarity=0.661 Sum_probs=2.5
Q ss_pred ehhhHh
Q 035786 440 LVGVFG 445 (693)
Q Consensus 440 ~~~~~~ 445 (693)
+.++++
T Consensus 11 aagVvg 16 (35)
T 1iij_A 11 IATVVG 16 (35)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 344444
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=30.19 E-value=1.3e+02 Score=30.58 Aligned_cols=132 Identities=13% Similarity=0.124 Sum_probs=69.2
Q ss_pred ccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEE--------------E--------c
Q 035786 521 KKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQC--------------L--------E 578 (693)
Q Consensus 521 g~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~--------------~--------~ 578 (693)
-.|..| ||.... ++..|.||-. .+...|-|..++...-.+.-|+.--+. +. . .
T Consensus 78 ~~Gstg-vff~~t-d~~~~VVK~s--~~l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~~~~~l~~l 152 (342)
T 1cja_A 78 EKGTEG-LFFVET-ESGVFIVKRS--TNIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRVITTL 152 (342)
T ss_dssp CSTTSC-EEEEEE-SSCEEEEECC--TTHHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCHHHHH
T ss_pred cCCCCC-eEEEEe-CCCEEEEeCc--HHHHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhhhhHHHHHh
Confidence 445544 554444 5778999954 233344455555555555555521111 00 0 0
Q ss_pred CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHH----HHHHHHHHHHHHhhhccCCC-CCeEe-cCCCCCCeee
Q 035786 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWIT----RLKIAIGAAEGLSYLHHECN-PPLVH-RDVQASSILL 652 (693)
Q Consensus 579 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~----r~~ia~~ia~gl~yLH~~~~-p~iiH-rDlk~~NILl 652 (693)
.+...+++|||+++..|.+.=+ -.|.. +..-.+|-.-++.+...+.. -+.+. .-=.+.||++
T Consensus 153 ~~~~~~l~meyv~G~~L~e~~~------------~~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~ 220 (342)
T 1cja_A 153 ANQANILLMELVRGITLNKLTT------------TSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIML 220 (342)
T ss_dssp TTCSEEEEEECCCEEESTTCCS------------SSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEE
T ss_pred hcccceehhhhcCCCccccchh------------hhhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEE
Confidence 1124569999999655543211 11222 22222333445666655532 23332 2246889999
Q ss_pred CCCCc-eEECCccccccc
Q 035786 653 DDKFE-VRLGSLSELHAQ 669 (693)
Q Consensus 653 d~~~~-~ki~Dfgla~~~ 669 (693)
+++.. +.+.|-+.+..-
T Consensus 221 ~~~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 221 SERGATVVPIDSKIIPLD 238 (342)
T ss_dssp ESBTTCEEECSCCCCCCC
T ss_pred eCCCCeEEEEcCCccccC
Confidence 87654 888999998664
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=27.77 E-value=52 Score=23.54 Aligned_cols=16 Identities=38% Similarity=0.729 Sum_probs=7.7
Q ss_pred eeehhhHhHHHHHHHH
Q 035786 438 FILVGVFGGLGFIAIL 453 (693)
Q Consensus 438 ~i~~~~~~~~~~~~~~ 453 (693)
++++++++++.+++++
T Consensus 11 iIi~svl~GLLLL~Li 26 (54)
T 2l8s_A 11 VILLSAFAGLLLLMLL 26 (54)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555555444433
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.39 E-value=1.2e+02 Score=24.64 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=18.7
Q ss_pred CcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEcc
Q 035786 135 PGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLS 174 (693)
Q Consensus 135 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 174 (693)
...|.++++|+.+.|-.+ ++..-...|.++.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 344555555555555432 232333345555555555544
No 458
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=21.27 E-value=63 Score=21.86 Aligned_cols=14 Identities=50% Similarity=1.054 Sum_probs=6.5
Q ss_pred eeehhhHhHHHHHH
Q 035786 438 FILVGVFGGLGFIA 451 (693)
Q Consensus 438 ~i~~~~~~~~~~~~ 451 (693)
++++++++++.+++
T Consensus 12 iIi~s~l~GLllL~ 25 (42)
T 2k1a_A 12 WVLVGVLGGLLLLT 25 (42)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34455555544433
Done!