BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035790
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LTX2|TIR1L_ARATH Transport inhibitor response 1-like protein OS=Arabidopsis thaliana
GN=At5g49980 PE=1 SV=1
Length = 619
Score = 280 bits (717), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 155/167 (92%)
Query: 1 MGRHRPDHATGEPMDEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFA 60
MGRHRPDH TG+PMDEGFGAIV+NC+KLTRLAVSGLLTD+AF Y+G+YGKL+RTLSVAFA
Sbjct: 453 MGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFA 512
Query: 61 GDSDMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEI 120
GDSDM L++VLEGCP+LQKLEIRDSPFGD ALRSG+H YYNMRF+WMS+C L++ C++I
Sbjct: 513 GDSDMALRHVLEGCPRLQKLEIRDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDI 572
Query: 121 AQAMPRLVVEVIRSDDEEETDNYVETLYMYRSLEGPRHDAPKFVTIL 167
A+AMP LVVEVI SDD+++ +YVETLYMYRSL+GPR+DAPKFVTIL
Sbjct: 573 ARAMPNLVVEVIGSDDDDDNRDYVETLYMYRSLDGPRNDAPKFVTIL 619
>sp|Q8RWQ8|FBX14_ARATH F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=2 SV=1
Length = 623
Score = 269 bits (687), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 148/171 (86%), Gaps = 4/171 (2%)
Query: 1 MGRHRPDHATGEPMDEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFA 60
MGRHRPDH TG+PMD+GFGAIV+NC+KLTRLAVSGLLTD AF YIG+YGKLIRTLSVAFA
Sbjct: 453 MGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFA 512
Query: 61 GDSDMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEI 120
G+SD L+YVLEGCPKLQKLEIRDSPFGD LRSG+H Y NMRF+W+SSC ++R GC+ +
Sbjct: 513 GNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGV 572
Query: 121 AQAMPRLVVEVIRSDDEEETD----NYVETLYMYRSLEGPRHDAPKFVTIL 167
+ A+P +VVEV +D +++ D +YVETLY+YRSL+GPR DAPKFVTIL
Sbjct: 573 SHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623
>sp|Q7XVM8|TIR1B_ORYSJ Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza
sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1
Length = 575
Score = 194 bits (493), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 117/170 (68%), Gaps = 7/170 (4%)
Query: 5 RPDHATGEPMDEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDSD 64
+PD T +P+DEGFGAIVR C+ L RL++SGLLTD+ F YIGKY K + LS+AFAGDSD
Sbjct: 406 KPDVVTSQPLDEGFGAIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSD 465
Query: 65 MGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAM 124
G+ +V+ GC L+KLEIRDSPFGDAAL Y MR LWMSSC +T +GCQ +A M
Sbjct: 466 KGMMHVMNGCKNLRKLEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKM 525
Query: 125 PRLVVEVIRSDD--EEETDNY-----VETLYMYRSLEGPRHDAPKFVTIL 167
P L VEVI D E +N+ VE LY+YR+ G R DAP FV IL
Sbjct: 526 PMLNVEVINERDGSNEMEENHGDLPKVEKLYVYRTTAGARDDAPNFVKIL 575
>sp|Q9LPW7|AFB3_ARATH Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3
PE=1 SV=1
Length = 577
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 121/171 (70%), Gaps = 7/171 (4%)
Query: 4 HRPDHATGEPMDEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDS 63
H+PDH T + +DEGFGAIV+ C+ L RL+VSGLLTD+ F YIG Y + + LS+AFAGD+
Sbjct: 407 HKPDHITFQSLDEGFGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDT 466
Query: 64 DMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQA 123
D G+ YVL GC K++KLEIRDSPFG+AAL + + Y MR LWMSSC +T GC+ +AQ
Sbjct: 467 DKGMLYVLNGCKKMRKLEIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQN 526
Query: 124 MPRLVVEVIRSD-------DEEETDNYVETLYMYRSLEGPRHDAPKFVTIL 167
PRL VE+I + +EE+ V+ LY+YR++ G R DAP +V IL
Sbjct: 527 SPRLNVEIINENENNGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYVRIL 577
>sp|Q2R3K5|TIRC_ORYSJ Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza
sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1
Length = 568
Score = 186 bits (472), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 119/165 (72%), Gaps = 6/165 (3%)
Query: 7 DHATGEPMDEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDSDMG 66
D TG+P+DEG+GAIV++C+ L RL +SGLLTD F YIG Y + + LSVAFAGD+D G
Sbjct: 402 DAVTGQPLDEGYGAIVQSCKGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDG 461
Query: 67 LKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAMPR 126
+ YVL GC L+KLEIRDSPFGD+AL +G+H Y MR LW+SSC +T GC+ +A +M
Sbjct: 462 MTYVLNGCKNLKKLEIRDSPFGDSALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMAN 521
Query: 127 LVVEVI-RSDDEEETDNY-----VETLYMYRSLEGPRHDAPKFVT 165
L +EV+ R+ E DN V+ LY+YR++ GPR DAP+F++
Sbjct: 522 LNIEVMNRAASINEADNANDAKKVKKLYIYRTVAGPRGDAPEFIS 566
>sp|Q9ZR12|GRH1_ARATH GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1
Length = 585
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
Query: 6 PDHATGEPMDEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDSDM 65
PD+ T EP+D+GF AI CR L RL+VSGLL+D+AF YIGK+ K +R LS+AFAGDSD+
Sbjct: 408 PDYKTNEPLDKGFKAIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDL 467
Query: 66 GLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAMP 125
L ++L GC L+KLEIRD PFGD AL MR LWMSSC ++ C+ ++Q MP
Sbjct: 468 MLHHLLSGCESLKKLEIRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMP 527
Query: 126 RLVVEVIRSDDEEE--TDNYVETLYMYRSLEGPRHDAPKFV 164
RL VEVI E + VE +Y+YR++ GPR D P+FV
Sbjct: 528 RLNVEVIDEHPPESRPESSPVERIYIYRTVAGPRMDTPEFV 568
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 21 IVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDSDM----------GLKYV 70
++R C KL +L V L+ D+ + Y K +R L V F + D+ GL +V
Sbjct: 305 LLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRV-FPSEPDLDATNIPLTEQGLVFV 363
Query: 71 LEGCPKLQKLEIRDSPFGDAAL 92
+GC KL+ + F +AAL
Sbjct: 364 SKGCRKLESVLYFCVQFTNAAL 385
>sp|Q9LW29|AFB2_ARATH Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2
PE=1 SV=1
Length = 575
Score = 173 bits (438), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 117/171 (68%), Gaps = 7/171 (4%)
Query: 4 HRPDHATGEPMDEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDS 63
++PDH T +P+DEGFGAIV+ C+ L RL++SGLLTD+ F YIG Y + LS+AFAGD+
Sbjct: 405 NKPDHVTSQPLDEGFGAIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDT 464
Query: 64 DMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQA 123
D G+ YVL GC K++KLEIRDSPFGD AL + + Y MR LWMSSC +T GC+ +A+
Sbjct: 465 DKGMLYVLNGCKKMKKLEIRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEK 524
Query: 124 MPRLVVEVIRSDDEE-------ETDNYVETLYMYRSLEGPRHDAPKFVTIL 167
P L VE+I +D E V+ LY+YR++ G R DAP FV IL
Sbjct: 525 APWLNVEIINENDNNRMEENGHEGRQKVDKLYLYRTVVGTRMDAPPFVWIL 575
>sp|Q0DKP3|TIR1A_ORYSJ Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza
sativa subsp. japonica GN=Os05g0150500 PE=2 SV=2
Length = 587
Score = 170 bits (430), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 108/170 (63%), Gaps = 6/170 (3%)
Query: 4 HRPDHATGEPMDEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDS 63
H PD+ T EP+D GF AIV +CR L RL++SGLLTD F IG + + LS+AFAG+S
Sbjct: 418 HTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNS 477
Query: 64 DMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQA 123
D+GL Y+L GC L+KLEIRD PFGD L + MR LWMSSC LT C+++A+
Sbjct: 478 DLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCLLTLGACRQLARK 537
Query: 124 MPRLVVEVIRSD------DEEETDNYVETLYMYRSLEGPRHDAPKFVTIL 167
MPRL VE++ D + VE LY+YR++ GPR D P V I+
Sbjct: 538 MPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRTIAGPRSDTPACVQIV 587
>sp|Q570C0|TIR1_ARATH Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana
GN=TIR1 PE=1 SV=2
Length = 594
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 109/162 (67%), Gaps = 3/162 (1%)
Query: 6 PDHATGEPMDEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDSDM 65
PD+ T EP+D GFGAIV +C+ L RL++SGLLTD+ F YIG Y K + LSVAFAGDSD+
Sbjct: 412 PDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471
Query: 66 GLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAMP 125
G+ +VL GC L+KLEIRD PFGD AL + MR LWMSSC ++ C+ + Q MP
Sbjct: 472 GMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMP 531
Query: 126 RLVVEVIR---SDDEEETDNYVETLYMYRSLEGPRHDAPKFV 164
+L VEVI + D VE +++YR++ GPR D P FV
Sbjct: 532 KLNVEVIDERGAPDSRPESCPVERVFIYRTVAGPRFDMPGFV 573
>sp|O04197|COI1_ARATH Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1
PE=1 SV=1
Length = 592
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 5 RPDHATGEPMDEGFGAIVRNCRKLTRLAV---SGLLTDRAFGYIGKYGKLIRTLSVAFAG 61
R + T P+D G +++ C+KL R A G LTD YIG+Y +R + + + G
Sbjct: 415 REERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVG 474
Query: 62 DSDMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIA 121
+SD GL GCP LQKLE+R F + A+ + + ++R+LW+ R + G +
Sbjct: 475 ESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQ 534
Query: 122 QAMPRLVVEVIRSDDEEETDNYVETLYM--------YRSLEGPRHDAPKFVTILR 168
A P +E+I S E + E M Y SL G R D P V +L+
Sbjct: 535 MARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVLK 589
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 1 MGRHRPDHATG------EPMDEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLI 52
+G H P+ T + DEG I R C KL L SG +TD +G+ +
Sbjct: 216 IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRL 275
Query: 53 RTLSVAFAGD-SDMGLKYVLEGCPKLQKLEIRDS-PFGDAALRSGLHHYYNMRFLWMSSC 110
R L VA +D+G + C +L+K+++ + D+ L H ++ L +S C
Sbjct: 276 RILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHC 335
Query: 111 RL-TRQGCQEIAQ-AMPRLVVEVIRSDDEEE-TDNYVETLYMYRSLE 154
L T G + + A +EVI D+ TD +E L SLE
Sbjct: 336 ELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLE 382
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 16 EGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYVLE 72
+G A+VR C L L + G L D A YIG + + TL++ +D GL +
Sbjct: 185 DGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICR 244
Query: 73 GCPKLQKLEIRD-SPFGDAALRSGLHHYYNMRFLWMSSC-RLTRQGCQEIAQAMPRLVVE 130
GC KLQ L S DA L + + +R L ++ C +LT G +A+ L
Sbjct: 245 GCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHEL--- 301
Query: 131 VIRSDDEEETDNYVETLYMYRSLEGPR 157
D EE ++ + S+ PR
Sbjct: 302 --EKMDLEECVQITDSTLIQLSIHCPR 326
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 1 MGRHRPDHATG------EPMDEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLI 52
+G H P+ T + DEG I R C KL L SG +TD +G+ +
Sbjct: 216 IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRL 275
Query: 53 RTLSVAFAGD-SDMGLKYVLEGCPKLQKLEIRDS-PFGDAALRSGLHHYYNMRFLWMSSC 110
R L VA +D+G + C +L+K+++ + D+ L H ++ L +S C
Sbjct: 276 RILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHC 335
Query: 111 RL-TRQGCQEIAQ-AMPRLVVEVIRSDDEEE-TDNYVETLYMYRSLE 154
L T G + + A +EVI D+ TD +E L SLE
Sbjct: 336 ELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLE 382
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 16 EGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYVLE 72
+G A+VR C L L + G L D A YIG + + TL++ +D GL +
Sbjct: 185 DGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICR 244
Query: 73 GCPKLQKLEIRD-SPFGDAALRSGLHHYYNMRFLWMSSC-RLTRQGCQEIAQAMPRLVVE 130
GC KLQ L S DA L + + +R L ++ C +LT G +A+ L
Sbjct: 245 GCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHEL--- 301
Query: 131 VIRSDDEEETDNYVETLYMYRSLEGPR 157
D EE ++ + S+ PR
Sbjct: 302 --EKMDLEECVQITDSTLIQLSIHCPR 326
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 1 MGRHRPDHATG------EPMDEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLI 52
+G H P+ T + DEG I R C KL L SG +TD +G+ +
Sbjct: 216 IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRL 275
Query: 53 RTLSVAFAGD-SDMGLKYVLEGCPKLQKLEIRDS-PFGDAALRSGLHHYYNMRFLWMSSC 110
R L VA +D+G + C +L+K+++ + D+ L H ++ L +S C
Sbjct: 276 RILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHC 335
Query: 111 RL-TRQGCQEIAQ-AMPRLVVEVIRSDDEEE-TDNYVETLYMYRSLE 154
L T G + + A +EVI D+ TD +E L SLE
Sbjct: 336 ELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLE 382
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 16 EGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYVLE 72
+G A+VR C L L + G L D A YIG + + TL++ +D GL +
Sbjct: 185 DGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICR 244
Query: 73 GCPKLQKLEIRD-SPFGDAALRSGLHHYYNMRFLWMSSC-RLTRQGCQEIAQAMPRLVVE 130
GC KLQ L S DA L + + +R L ++ C +LT G +A+ L
Sbjct: 245 GCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHEL--- 301
Query: 131 VIRSDDEEETDNYVETLYMYRSLEGPR 157
D EE ++ + S+ PR
Sbjct: 302 --EKMDLEECVQITDSTLIQLSIHCPR 326
>sp|Q5BJ29|FBXL7_MOUSE F-box/LRR-repeat protein 7 OS=Mus musculus GN=Fbxl7 PE=1 SV=1
Length = 491
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 15 DEGFGAIVRNCRKLTRLAVSG--LLTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYV- 70
DEG +V C + L+VS ++D I K +R LS+A G +D+G++YV
Sbjct: 313 DEGLRYLVIYCTSIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRITDVGIRYVA 372
Query: 71 -------------------------LEGCPKLQKLEIRDSPF-GDAALRSGLHHYYNMRF 104
+ C KL+ L+I P D L S + +N++
Sbjct: 373 KYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLESLALNCFNLKR 432
Query: 105 LWMSSCR-LTRQGCQEIA 121
L + SC +T QG Q +A
Sbjct: 433 LSLKSCESITGQGLQIVA 450
>sp|Q96P20|NALP3_HUMAN NACHT, LRR and PYD domains-containing protein 3 OS=Homo sapiens
GN=NLRP3 PE=1 SV=3
Length = 1036
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 67 LKYVLEGCPKLQKLEIRDSPFGDAALR---SGLHHYY-NMRFLWMSSCRLTRQGCQEIAQ 122
+ VL KL +L++ D+ GD +R GL H N++ LW+ SC LT CQ++A
Sbjct: 790 ISLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCNLKKLWLVSCCLTSACCQDLAS 849
Query: 123 AM 124
+
Sbjct: 850 VL 851
Score = 34.3 bits (77), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 66 GLKYVLEGCPKLQKLEIRDSPFGDAALR----SGLHHYYNMRFLWMSSCRLTRQGCQEIA 121
GL VL L +L++ D+ GD +R + H N+R LW+ C L+ + C +I+
Sbjct: 732 GLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPGCNIRRLWLGRCGLSHECCFDIS 791
Query: 122 QAMP--RLVVEVIRSDD 136
+ + +VE+ SD+
Sbjct: 792 LVLSSNQKLVELDLSDN 808
>sp|B0FPE9|NALP3_MACMU NACHT, LRR and PYD domains-containing protein 3 OS=Macaca mulatta
GN=NLRP3 PE=2 SV=1
Length = 1035
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 67 LKYVLEGCPKLQKLEIRDSPFGDAALR---SGLHHYY-NMRFLWMSSCRLTRQGCQEIAQ 122
+ VL KL +L++ D+ GD +R GL H N++ LW+ SC LT CQ++A
Sbjct: 789 ISLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCNLKKLWLVSCCLTSACCQDLAS 848
Query: 123 AM 124
+
Sbjct: 849 VL 850
Score = 34.3 bits (77), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 66 GLKYVLEGCPKLQKLEIRDSPFGDAALR----SGLHHYYNMRFLWMSSCRLTRQGCQEIA 121
GL VL L +L++ D+ GD +R + H N+R LW+ C L+ + C +I+
Sbjct: 731 GLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPDCNIRRLWLGRCGLSHECCFDIS 790
Query: 122 QAMP--RLVVEVIRSDD 136
+ + +VE+ SD+
Sbjct: 791 LVLSSNQKLVELDLSDN 807
>sp|A6QLE5|NALP3_BOVIN NACHT, LRR and PYD domains-containing protein 3 OS=Bos taurus
GN=NLRP3 PE=2 SV=1
Length = 1031
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 17 GFGAIVRNCRKLTRLAVSG-LLTDRAFGYIGKY----GKLIRTL---SVAFAGDSDMGLK 68
G +++ N LT L +SG L D + + G IR L + +
Sbjct: 727 GIFSVLSNNWNLTELNLSGNTLGDPGMNVLCETLQQPGCNIRRLWLGQCCLSHQCCFNIS 786
Query: 69 YVLEGCPKLQKLEIRDSPFGDAALR---SGLHHYY-NMRFLWMSSCRLTRQGCQEIAQAM 124
VL KL +L++ + GD +R GL H + N++ LW+ SC LT C+++A +
Sbjct: 787 SVLSNNQKLVELDLSHNALGDFGIRLLCVGLRHLFCNLKKLWLVSCCLTSASCEDLASVL 846
Query: 125 P 125
Sbjct: 847 S 847
>sp|Q8R4B8|NALP3_MOUSE NACHT, LRR and PYD domains-containing protein 3 OS=Mus musculus
GN=Nlrp3 PE=2 SV=1
Length = 1033
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 70 VLEGCPKLQKLEIRDSPFGDAALR---SGLHHYY-NMRFLWMSSCRLTRQGCQEIAQAM 124
VL KL +L++ D+ GD +R GL H N++ LW+ SC LT CQ++A +
Sbjct: 790 VLSSSQKLVELDLSDNALGDFGIRLLCVGLKHLLCNLQKLWLVSCCLTSACCQDLALVL 848
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 53 RTLSVAFAGDSDMGLKYVLEGCPKLQKLEIRDSPFGDAALR---SGLHHY-YNMRFLWMS 108
R ++ GL L L +L++ D+ GD +R L H N++ LW+
Sbjct: 716 RLVNCCLTSSFCRGLFSSLSTNRSLTELDLSDNTLGDPGMRVLCEALQHPGCNIQRLWLG 775
Query: 109 SCRLTRQGCQEIAQAM--PRLVVEVIRSDD 136
C L+ Q C +I+ + + +VE+ SD+
Sbjct: 776 RCGLSHQCCFDISSVLSSSQKLVELDLSDN 805
>sp|Q9UJT9|FBXL7_HUMAN F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL7 PE=2 SV=1
Length = 491
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 31/138 (22%)
Query: 15 DEGFGAIVRNCRKLTRLAVSG--LLTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYV- 70
DEG +V C + L+VS ++D I K +R LS+A G +D+G++YV
Sbjct: 313 DEGLRYLVIYCASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVA 372
Query: 71 -------------------------LEGCPKLQKLEIRDSPF-GDAALRSGLHHYYNMRF 104
+ C KL+ L+I P D L + +N++
Sbjct: 373 KYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKR 432
Query: 105 LWMSSCR-LTRQGCQEIA 121
L + SC +T QG Q +A
Sbjct: 433 LSLKSCESITGQGLQIVA 450
>sp|Q9C626|FB37_ARATH F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2
SV=1
Length = 518
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGLL-TDRAFGYIGKYGKLIRTLSVAFAGDSDMG---LKYV 70
DEG A+ + C +L L + G+ T + G + K + +A G G L +
Sbjct: 326 DEGLVAVAKFCSQLQELVLIGVNPTTLSLGMLA--AKCLNLERLALCGCDTFGDPELSCI 383
Query: 71 LEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQE---IAQAMPRL 127
CP L+KL I++ P D + + + + + + C+ GC + + M +
Sbjct: 384 AAKCPALRKLCIKNCPISDVGIENLANGCPGLTKVKIKKCKGVLGGCADWLRTVRPMLSV 443
Query: 128 VVEVIRSDDEEETDNYVETLYMYRSLEGPRHDA 160
+ + + EE N V +E P+ ++
Sbjct: 444 NADTMEQEHEEAASNDVVGGSQENGIEFPQLNS 476
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 12 EPMDEGFGAIVRNCRKLTRLAVSGLLT--DRAFGYIGKYGKLIRTLSVAFAGDSDMGLKY 69
P G + C L RLA+ G T D I +R L + SD+G++
Sbjct: 348 NPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIEN 407
Query: 70 VLEGCPKLQKLEIR 83
+ GCP L K++I+
Sbjct: 408 LANGCPGLTKVKIK 421
>sp|Q9ZPE4|FBW2_ARATH F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1
Length = 317
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 21 IVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDSDMGLKYVLEGCPKLQKL 80
I R+ L +L+V+GL D F +I ++ ++TL V +G ++ G+ V E KL L
Sbjct: 77 IPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSGVVNVAE---KLSSL 133
Query: 81 EIRDSPF----GDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAMPRLVVEVIRSDD 136
D + G A+++ H C+ R+ C+ + P V V+ DD
Sbjct: 134 TFLDLSYCCKIGPEAIQAIGKH-----------CKSLREFCRNMH---PLDVASVVSHDD 179
Query: 137 E 137
E
Sbjct: 180 E 180
>sp|Q9S9X4|FBL8_ARATH Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8
PE=4 SV=1
Length = 554
Score = 38.1 bits (87), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 12 EPMDEGFGAIVRNCRKLTRLAVSGLLT--DRAFGYIGKYGKLIRTLSVAFAGDSDMGLKY 69
P AIV NC L RLA+ G T D I + +R L + +D G+K
Sbjct: 381 NPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIAEKCLALRKLCIKNCPITDDGIKA 440
Query: 70 VLEGCPKLQKLEIR 83
+ GCP L K++++
Sbjct: 441 LGNGCPNLLKVKVK 454
>sp|Q8LB33|FB330_ARATH F-box protein At3g58530 OS=Arabidopsis thaliana GN=At3g58530 PE=2
SV=1
Length = 353
Score = 37.7 bits (86), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVA-FAGDSDMGLKYVL 71
D G +V+NCR +T L +SG LTD++ + + + +L++ +D GL VL
Sbjct: 152 DAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVL 211
Query: 72 EGCPKLQKLEIRD-SPFGDAALRSGLHHYYNMRFL 105
+ C LQ L + S F D A + ++RFL
Sbjct: 212 QKCFSLQTLNLYALSGFTDKAYMK-ISLLADLRFL 245
>sp|P41391|RNA1_SCHPO Ran GTPase-activating protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rna1 PE=1 SV=1
Length = 386
Score = 37.4 bits (85), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 50 KLIRTLSVAFAGDSDMGLKYVL-EG---CPKLQKLEIRDSPF---GDAALRSGLHHYYNM 102
+L+ T+ + G G++++L EG C +L+ L+++D+ F G +AL L + N+
Sbjct: 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 246
Query: 103 RFLWMSSCRLTRQGCQEIAQAMPRL 127
R L ++ C L+ +G + A +L
Sbjct: 247 RELGLNDCLLSARGAAAVVDAFSKL 271
>sp|A3QEZ4|DSBB_SHELP Disulfide bond formation protein B OS=Shewanella loihica (strain
ATCC BAA-1088 / PV-4) GN=dsbB PE=3 SV=1
Length = 171
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 30 RLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDS-DMGLKYVLEGCPKLQKLEIRDSPFG 88
RLAV G+LT G +G +L+R L V G S GLK LE L +++ SPF
Sbjct: 47 RLAVLGVLTAGLIGVVGHQFRLLRFLGVLLWGVSAAWGLKLALE----LVEMQTNPSPFS 102
Query: 89 DAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAM 124
+ + + W S L C +I M
Sbjct: 103 TCSFLPEFPEWMPLH-EWFPSVFLPTGMCTDIPWEM 137
>sp|P59046|NAL12_HUMAN NACHT, LRR and PYD domains-containing protein 12 OS=Homo sapiens
GN=NLRP12 PE=1 SV=2
Length = 1061
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 70 VLEGCPKLQKLEIRDSPFGDAALR---SGLHH-YYNMRFLWMSSCRLTRQGCQEIAQAMP 125
VL P L +L++ + D LR GL H +R LW+ CRLT C E+A +
Sbjct: 822 VLGTNPHLVELDLTGNALEDLGLRLLCQGLRHPVCRLRTLWLKICRLTAAACDELASTLS 881
Query: 126 RLVVEVIRSDDEEETDNYVETLYMYRSLEGPRHDAPKFVTI 166
V + +R D + N + L + EG RH K T+
Sbjct: 882 --VNQSLRELD--LSLNELGDLGVLLLCEGLRHPTCKLQTL 918
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 66 GLKYVLEGCPKLQKLEIRDSPFGDAAL---RSGLHH-YYNMRFLWMSSCRLTRQGCQEI 120
GL VL+ L++L++ + GD L GL H ++ LW+ SC LT + C+ +
Sbjct: 932 GLSVVLQANHNLRELDLSFNDLGDWGLWLLAEGLQHPACRLQKLWLDSCGLTAKACENL 990
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYVL 71
DEG I R C +L L +SG LTD + +G ++ L A +D G +
Sbjct: 223 DEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLA 282
Query: 72 EGCPKLQKLEIRDSPF-GDAALRSGLHHYYNMRFLWMSSCRL 112
C +L+K+++ + D+ L H ++ L +S C L
Sbjct: 283 RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCEL 324
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 16 EGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSV-AFAGDSDMGLKYVLE 72
+G A+VR CR L L + G L D A +I Y + +L++ + + +D G+ +
Sbjct: 172 DGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICR 231
Query: 73 GCPKLQKLEIRD-SPFGDAAL 92
GC +LQ L + S DA+L
Sbjct: 232 GCHRLQALCLSGCSNLTDASL 252
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYVL 71
DEG I R C +L L +SG LTD + +G ++ L A +D G +
Sbjct: 223 DEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLA 282
Query: 72 EGCPKLQKLEIRDSPF-GDAALRSGLHHYYNMRFLWMSSCRL 112
C +L+K+++ + D+ L H ++ L +S C L
Sbjct: 283 RNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCEL 324
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 16 EGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSV-AFAGDSDMGLKYVLE 72
+G A+VR CR L L + G L D A +I Y + +L++ + + +D G+ +
Sbjct: 172 DGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICR 231
Query: 73 GCPKLQKLEIRD-SPFGDAALRS 94
GC +LQ L + S DA+L +
Sbjct: 232 GCHRLQALCLSGCSNLTDASLTA 254
>sp|Q9M651|RAGP2_ARATH RAN GTPase-activating protein 2 OS=Arabidopsis thaliana GN=RANGAP2
PE=1 SV=2
Length = 545
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 65 MGLKYVLEGCPKLQKLEIRDSPFGDAA---LRSGLHHYYNMRFLWMSSCRLTRQGCQEIA 121
+ L LE C ++KL++RD+ FG A L L + +M L++S L +G I
Sbjct: 316 IALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIV 375
Query: 122 QAM 124
A+
Sbjct: 376 NAL 378
>sp|O49286|SKP2B_ARATH F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1
Length = 360
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSV--AFAGDSDMGLKYV 70
D ++ R C LT+L +SG +D A ++ ++ + ++ L++ SD L+ +
Sbjct: 132 DHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAI 191
Query: 71 LEGCPKLQKLEI 82
E C +LQ L +
Sbjct: 192 GENCNQLQSLNL 203
>sp|Q9SN10|FBL16_ARATH F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana GN=FBL16 PE=2
SV=1
Length = 522
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 18 FGAIVRNCRKLTRLAV--SGLLTDRAFGYIGKYGKLIRTLSVAFAGDSDMGLKYVLEGCP 75
AI NC+KL RLA+ SG + D G I + +R + SD+G++ + GCP
Sbjct: 352 LSAIASNCKKLERLALCGSGTIGDAEIGCIAEKCVTLRKFCIKGCLISDVGVQALALGCP 411
Query: 76 KLQ 78
KL
Sbjct: 412 KLV 414
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 17 GFGAIVRNCRKLTRLAVSGL----LTDRAFGYIGKYGKLIRTLSVAFAGDSDMGLKYVLE 72
G ++V C+ L +L + G + D+ + K+ ++ L + + M L +
Sbjct: 298 GLASVVERCKLLRKLHIDGWRVKRIGDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIAS 357
Query: 73 GCPKLQKLEIRDS-PFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAMP 125
C KL++L + S GDA + +R + C ++ G Q +A P
Sbjct: 358 NCKKLERLALCGSGTIGDAEIGCIAEKCVTLRKFCIKGCLISDVGVQALALGCP 411
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
Query: 27 KLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYVLEGCPKLQKLEI--- 82
+L RL V TD I K L TL + D S++GL V+E C L+KL I
Sbjct: 263 RLERLQV----TDIGLFGISKCSNL-ETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGW 317
Query: 83 RDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAMPRL 127
R GD L S H N++ L + T IA +L
Sbjct: 318 RVKRIGDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIASNCKKL 362
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYVL 71
D+G I R C +L L +SG LTD + +G ++ L A +D G +
Sbjct: 223 DDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLA 282
Query: 72 EGCPKLQKLEIRDSPF-GDAALRSGLHHYYNMRFLWMSSCRL 112
C +L+K+++ + D+ L H ++ L +S C L
Sbjct: 283 RNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSLSHCEL 324
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 16 EGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSV-AFAGDSDMGLKYVLE 72
EG A+VR CR L L + G L D A +I + + +L++ + + +D G+ +
Sbjct: 172 EGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICR 231
Query: 73 GCPKLQKLEIRD-SPFGDAAL 92
GC +LQ L + S DA+L
Sbjct: 232 GCHRLQALCLSGCSNLTDASL 252
>sp|Q9SKK0|EBF1_ARATH EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1
SV=1
Length = 628
Score = 35.8 bits (81), Expect = 0.20, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 28 LTRLAVSGL--LTDRAFGYIGK---YGKLIRTLSVAFAGDSDMGLKYVLEGCPKLQKLEI 82
+T L ++GL ++++ F +G KL A G +DMGL+ V +GCP ++K I
Sbjct: 309 ITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAII 368
Query: 83 RDSP-FGDAALRSGLHHYYNMRFLWMSSC-RLTRQG 116
SP D L S ++ L + C R+T+ G
Sbjct: 369 SKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFG 404
Score = 32.0 bits (71), Expect = 2.8, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 30 RLAVSGLLTDRAFGYIGKYGKLIRTLSV-AFAGDSDMGLKYVLEGCPKLQKLEI-RDSPF 87
R + S ++D IG+ + +LS+ + +D GL + EGC +L+KLE+ R S
Sbjct: 157 RGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTI 216
Query: 88 GDAALRSGLHHYYNMRFLWMSSC-RLTRQGCQEIAQAMPRL 127
D L + N+ L + +C R+ +G IA++ +L
Sbjct: 217 TDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKL 257
>sp|Q13309|SKP2_HUMAN S-phase kinase-associated protein 2 OS=Homo sapiens GN=SKP2 PE=1
SV=2
Length = 424
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 21 IVRNCRKLTRLAVSGL-LTDRAFGYIGKYGKLIRTLSVAFAGDSDMGLKYVLEGCPKLQK 79
I+ C KL L++ GL L+D + K L+R +G S+ L+ +L C +L +
Sbjct: 201 ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 260
Query: 80 LEI 82
L +
Sbjct: 261 LNL 263
>sp|Q06479|YL352_YEAST F-box protein YLR352W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YLR352W PE=1 SV=1
Length = 807
Score = 35.8 bits (81), Expect = 0.21, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Query: 70 VLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAMPRLVV 129
+L+ P+LQKL++ + D+ L G+ H+ N+ L +++C Q PR V+
Sbjct: 234 ILKMLPELQKLDLSHTSIDDSTLYHGIPHWKNLTHLSLATC----------LQVTPRAVL 283
Query: 130 E 130
E
Sbjct: 284 E 284
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 16 EGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSV-AFAGDSDMGLKYVLE 72
+G A+VR CR L L + G L D A +I Y + +L++ + + +D G+ +
Sbjct: 172 DGVEALVRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCR 231
Query: 73 GCPKLQKLEIRDS-PFGDAALRS 94
GCP+LQ L + DA+L +
Sbjct: 232 GCPRLQALCLSGCGSLTDASLTA 254
>sp|P10775|RINI_PIG Ribonuclease inhibitor OS=Sus scrofa GN=RNH1 PE=1 SV=1
Length = 456
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 52 IRTLSVAFAGDSDMG---LKYVLEGCPKLQKLEIRDSPFGDAALR----SGLHHYYNMRF 104
I+ LS+ ++ G L L P L++L + D+P GDA LR L ++
Sbjct: 82 IQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEK 141
Query: 105 LWMSSCRLTRQGCQEIAQAM--PRLVVEVIRSDDE 137
L + CRLT C+ +A + R + E+ S+++
Sbjct: 142 LQLEYCRLTAASCEPLASVLRATRALKELTVSNND 176
>sp|Q9QZH7|FXL20_RAT F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1
SV=1
Length = 276
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 16 EGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYVLE 72
+G A+VR C L L + G L D A YIG + + TL++ +D GL +
Sbjct: 185 DGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICR 244
Query: 73 GCPKLQKL 80
GC KLQ L
Sbjct: 245 GCHKLQSL 252
>sp|Q9LE82|RAGP1_ARATH RAN GTPase-activating protein 1 OS=Arabidopsis thaliana GN=RANGAP1
PE=1 SV=1
Length = 535
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 53 RTLSVAFAGDSDMGLKYVLEGCPKLQKLEIRDSPF---GDAALRSGLHHYYNMRFLWMSS 109
R S + + L LE C L+KL++RD+ F G AL L ++ ++MS
Sbjct: 299 RCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSY 358
Query: 110 CRLTRQGCQEIAQAM 124
L +G + +++A+
Sbjct: 359 LNLEDEGTEALSEAL 373
>sp|Q8NEE6|FXL13_HUMAN F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=3
Length = 735
Score = 34.7 bits (78), Expect = 0.48, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 63 SDMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSC-RLTRQGCQ 118
+D ++++ EGCP + L + ++ + +R H++N++ L ++ C R T +G Q
Sbjct: 259 TDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQ 315
>sp|Q647I9|NALP5_BOVIN NACHT, LRR and PYD domains-containing protein 5 OS=Bos taurus
GN=NLRP5 PE=2 SV=1
Length = 1098
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 66 GLKYVLEGCPKLQKLEIRDSPFGD---AALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQ 122
L V+ P+L+ L++ + GD AAL GL + L + +C LT +GC+ ++
Sbjct: 955 SLSNVITRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSA 1014
Query: 123 AM 124
A+
Sbjct: 1015 AL 1016
>sp|Q5R8X9|AMN1_PONAB Protein AMN1 homolog OS=Pongo abelii GN=AMN1 PE=2 SV=1
Length = 258
Score = 34.3 bits (77), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGLL--TDRAFGYIGKYGKLIRTLSVAFAGDSDMGLKYVLE 72
DEG A+ NC+ L + + G L TD + +GK ++ + + SD G+ ++
Sbjct: 130 DEGVVALALNCQLLKIINLGGCLSITDVSLHALGKNCPFLQCVDFSATQVSDSGVIALVS 189
Query: 73 GCPKLQKLEI----RDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAM 124
G P +KLE D A+ + L + +R L C L +E+ + +
Sbjct: 190 G-PCAKKLEEIHMGHCVNLTDGAVEAVLTYCPQIRILLFHGCPLITDHSREVLEQL 244
>sp|Q9FE83|SKIP2_ARATH F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1
Length = 527
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 18 FGAIVRNCRKLTRLAV--SGLLTDRAFGYIGKYGKLIRTLSVAFAGDSDMGLKYVLEGCP 75
AI NC KL RLA+ SG + D I + +R + SD G++ + GCP
Sbjct: 358 LAAIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFCIKGCPVSDRGIEALAVGCP 417
Query: 76 KLQ 78
L
Sbjct: 418 NLV 420
Score = 33.5 bits (75), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 5 RPDHATGEPMDEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVAFAGD 62
R D + DE I C LTR+ + G +TD K K ++ LSV
Sbjct: 112 RCDRKSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCNF 171
Query: 63 SDMGLKYVLEGCPKLQKLEIR 83
G+ +LE C L++L ++
Sbjct: 172 GAKGVNAMLEHCKLLEELSVK 192
>sp|Q8IY45|AMN1_HUMAN Protein AMN1 homolog OS=Homo sapiens GN=AMN1 PE=2 SV=4
Length = 258
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGLL--TDRAFGYIGKYGKLIRTLSVAFAGDSDMGLKYVLE 72
DEG A+ NC+ L + + G L TD + +GK ++ + + SD G+ ++
Sbjct: 130 DEGVVALALNCQLLKIIDLGGCLSITDVSLHALGKNCPFLQCVDFSATQVSDSGVIALVS 189
Query: 73 GCPKLQKLEI----RDSPFGDAALRSGLHHYYNMRFLWMSSCRLTRQGCQEIAQAM 124
G P +KLE D A+ + L + +R L C L +E+ + +
Sbjct: 190 G-PCAKKLEEIHMGHCVNLTDGAVEAVLTYCPQIRILLFHGCPLITDHSREVLEQL 244
>sp|A1A5X2|FBXL7_DANRE F-box/LRR-repeat protein 7 OS=Danio rerio GN=fbxl7 PE=2 SV=1
Length = 489
Score = 33.9 bits (76), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDSDMGLKYVLEGC 74
DEG I +C +LT L Y+ + +L +D GL++++ C
Sbjct: 285 DEGLHTIAAHCTQLTHL------------YLRRCVRL-----------TDEGLRFLVIYC 321
Query: 75 PKLQKLEIRDSPF-GDAALRSGLHHYYNMRFLWMSSC-RLTRQGCQEIAQAMPRL 127
P +++L + D F D LR +R+L ++ C R+T G + +A+ RL
Sbjct: 322 PGVRELSVSDCRFISDFGLREIAKLEGRLRYLSIAHCSRITDVGVRYVAKYCSRL 376
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 31/138 (22%)
Query: 15 DEGFGAIVRNCRKLTRLAVSG--LLTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLKYV- 70
DEG +V C + L+VS ++D I K +R LS+A +D+G++YV
Sbjct: 311 DEGLRFLVIYCPGVRELSVSDCRFISDFGLREIAKLEGRLRYLSIAHCSRITDVGVRYVA 370
Query: 71 -------------------------LEGCPKLQKLEIRDSPF-GDAALRSGLHHYYNMRF 104
+ C KL+ L+I P DA L + +N++
Sbjct: 371 KYCSRLRYLNARGCEGLTDHGIEHLAKSCLKLKSLDIGKCPLVSDAGLEQLALNSFNLKR 430
Query: 105 LWMSSCR-LTRQGCQEIA 121
L + SC +T +G Q +A
Sbjct: 431 LSLKSCESITGRGLQVVA 448
>sp|Q9D486|CMIP_MOUSE C-Maf-inducing protein OS=Mus musculus GN=Cmip PE=2 SV=3
Length = 773
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 29 TRLAVSGLLTDRAFGYI---GKYGKLIRTLSVAFAGDSDMGLKYVLEGCPKLQKLEIRDS 85
TRL + TD + G +G L LS+AF + +++++ P L++L + +
Sbjct: 639 TRLTLPSKSTDADLARLLSSGSFGNL-ENLSLAFTNVTSACAEHLIK-LPSLKQLNLWST 696
Query: 86 PFGDAALRSGLHHYYNMRFLWMSSCRLTRQG 116
FGDA LR H ++ L + +T G
Sbjct: 697 QFGDAGLRLLSEHLTMLQVLNLCETPVTDAG 727
>sp|Q8IY22|CMIP_HUMAN C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=1 SV=3
Length = 773
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 29 TRLAVSGLLTDRAFGYI---GKYGKLIRTLSVAFAGDSDMGLKYVLEGCPKLQKLEIRDS 85
TRL + TD + G +G L LS+AF + +++++ P L++L + +
Sbjct: 639 TRLTLPSKSTDADLARLLSSGSFGNL-ENLSLAFTNVTSACAEHLIK-LPSLKQLNLWST 696
Query: 86 PFGDAALRSGLHHYYNMRFLWMSSCRLTRQG 116
FGDA LR H ++ L + +T G
Sbjct: 697 QFGDAGLRLLSEHLTMLQVLNLCETPVTDAG 727
>sp|Q5R6E1|FBXL5_PONAB F-box/LRR-repeat protein 5 OS=Pongo abelii GN=FBXL5 PE=2 SV=1
Length = 691
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 49 GKLIRTLSVAFAGD-SDMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWM 107
G ++TL +A++ S ++ +LE CP L+ L++ + D+A S + W+
Sbjct: 329 GTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDS---------WSWL 379
Query: 108 SSCRLTRQ----GCQEIA 121
C+ R GC++I
Sbjct: 380 GCCQSLRHLDLSGCEKIT 397
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 15 DEGFGAIVRNCRKLTRLAVSGL--LTDRAFGYIGKYGKLIRTLSVA---FAGDSDMGLKY 69
D F A+ C L RLA+ TD+ IGK K ++ L+++ F S GL+
Sbjct: 283 DVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFV--SCKGLEA 340
Query: 70 VLEGCPKLQKLEIR 83
+ GC +L+++EI
Sbjct: 341 IAHGCKELERVEIN 354
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 15 DEGFGAIVRNCRKLTR---LAVSGLLTDRAFGYIGKYGKLIRTLSVAFAGDSDMGLKYVL 71
D G +V C K + +A S +TD + +G + KL+ L + D GL V
Sbjct: 206 DVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDSEYIHDKGLIAVA 265
Query: 72 EGCPKLQKLEIRDSPFGDAAL 92
+GC +L+ L+++ D A
Sbjct: 266 QGCHRLKNLKLQCVSVTDVAF 286
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 12 EPMDEGFGAIVRNCRKLTRLAV--SGLLTDRAFGYIGKYGKLIRTLSVAFAGD-SDMGLK 68
E ++G +I ++C+ LT L++ + ++A IGK G ++ L+V+ SD G+
Sbjct: 436 EIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGK-GCSLQQLNVSGCNQISDAGIT 494
Query: 69 YVLEGCPKLQKLEI 82
+ GCP+L L+I
Sbjct: 495 AIARGCPQLTHLDI 508
>sp|Q9UKA1|FBXL5_HUMAN F-box/LRR-repeat protein 5 OS=Homo sapiens GN=FBXL5 PE=1 SV=2
Length = 691
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 49 GKLIRTLSVAFAGD-SDMGLKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWM 107
G ++TL +A++ S ++ +LE CP L+ L++ + D+A S + W+
Sbjct: 329 GTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDS---------WSWL 379
Query: 108 SSCRLTRQ----GCQEIA 121
C+ R GC++I
Sbjct: 380 GCCQSLRHLDLSGCEKIT 397
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,214,010
Number of Sequences: 539616
Number of extensions: 2896875
Number of successful extensions: 5377
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 5259
Number of HSP's gapped (non-prelim): 155
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)