Query         035793
Match_columns 510
No_of_seqs    168 out of 2037
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 06:30:06 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035793.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035793hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0158 Cytochrome P450 CYP3/C 100.0 1.4E-81   3E-86  588.6  41.5  458   27-509    25-499 (499)
  2 KOG0156 Cytochrome P450 CYP2 s 100.0 6.5E-80 1.4E-84  587.3  42.8  454   32-509    25-488 (489)
  3 PLN03195 fatty acid omega-hydr 100.0 9.8E-78 2.1E-82  595.7  48.1  480   28-509    25-516 (516)
  4 PLN02169 fatty acid (omega-1)- 100.0 1.8E-77 3.9E-82  587.7  47.3  463   27-508    25-499 (500)
  5 KOG0157 Cytochrome P450 CYP4/C 100.0 1.3E-77 2.9E-82  584.4  45.0  461   31-509    33-496 (497)
  6 PLN02290 cytokinin trans-hydro 100.0 4.3E-76 9.2E-81  584.5  44.9  459   26-509    35-515 (516)
  7 PLN02971 tryptophan N-hydroxyl 100.0 4.8E-75   1E-79  577.0  43.2  458   34-508    58-533 (543)
  8 PTZ00404 cytochrome P450; Prov 100.0 1.1E-74 2.3E-79  570.1  37.4  468   15-508    11-482 (482)
  9 PLN02687 flavonoid 3'-monooxyg 100.0 1.9E-73 4.2E-78  564.0  43.6  454   34-509    35-509 (517)
 10 PLN03234 cytochrome P450 83B1; 100.0 9.7E-74 2.1E-78  565.8  41.4  457   32-508    27-498 (499)
 11 PLN02183 ferulate 5-hydroxylas 100.0 1.5E-73 3.3E-78  564.6  40.9  449   33-508    36-511 (516)
 12 PLN00168 Cytochrome P450; Prov 100.0 3.7E-73   8E-78  562.3  43.0  457   34-509    36-517 (519)
 13 PLN02500 cytochrome P450 90B1  100.0 2.8E-73   6E-78  560.2  41.0  440   34-507    39-488 (490)
 14 PLN03112 cytochrome P450 famil 100.0 3.3E-73 7.2E-78  563.5  41.9  460   34-509    33-508 (514)
 15 PLN00110 flavonoid 3',5'-hydro 100.0 5.3E-73 1.1E-77  557.3  42.6  464   22-508    17-496 (504)
 16 KOG0159 Cytochrome P450 CYP11/ 100.0 1.3E-72 2.8E-77  515.0  40.2  454   35-510    52-519 (519)
 17 PLN02394 trans-cinnamate 4-mon 100.0 1.2E-71 2.7E-76  551.4  45.2  458   32-510    29-503 (503)
 18 PLN02426 cytochrome P450, fami 100.0 3.8E-71 8.3E-76  541.9  48.0  443   41-509    49-500 (502)
 19 PLN02966 cytochrome P450 83A1  100.0 5.8E-72 1.3E-76  552.0  40.6  457   33-509    29-498 (502)
 20 PLN02738 carotene beta-ring hy 100.0 1.3E-71 2.9E-76  553.3  41.5  458   26-509   108-595 (633)
 21 PLN02774 brassinosteroid-6-oxi 100.0 1.5E-71 3.3E-76  543.4  38.8  437   26-507    23-462 (463)
 22 PLN03018 homomethionine N-hydr 100.0 6.7E-70 1.5E-74  535.8  46.0  460   35-509    42-524 (534)
 23 PLN02655 ent-kaurene oxidase   100.0 4.7E-70   1E-74  533.3  41.4  448   35-509     1-464 (466)
 24 PLN02936 epsilon-ring hydroxyl 100.0 1.7E-69 3.8E-74  531.5  45.0  455   33-509    12-482 (489)
 25 PF00067 p450:  Cytochrome P450 100.0   7E-72 1.5E-76  553.0  28.3  451   35-505     1-463 (463)
 26 PLN02196 abscisic acid 8'-hydr 100.0 3.4E-69 7.3E-74  526.3  41.4  425   34-508    36-462 (463)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 6.1E-69 1.3E-73  523.9  38.2  439   32-509     6-450 (452)
 28 PLN02987 Cytochrome P450, fami 100.0 3.9E-68 8.5E-73  516.6  42.2  434   35-509    32-469 (472)
 29 PLN02302 ent-kaurenoic acid ox 100.0   5E-68 1.1E-72  525.6  43.1  439   34-509    43-488 (490)
 30 KOG0684 Cytochrome P450 [Secon 100.0 6.5E-67 1.4E-71  465.3  33.4  450   27-510    24-486 (486)
 31 PLN02648 allene oxide synthase 100.0 3.9E-58 8.4E-63  442.7  29.1  409   33-486    17-465 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 5.2E-54 1.1E-58  409.7  31.2  378   59-508    26-410 (411)
 33 COG4459 NapE Periplasmic nitra  68.5       5 0.00011   25.3   2.1   28   13-40     34-61  (62)
 34 PF12554 MOZART1:  Mitotic-spin  67.2      22 0.00047   22.1   4.6   43  293-335     5-47  (48)
 35 PF05084 GRA6:  Granule antigen  54.1      23 0.00049   28.2   3.9   29   12-40    156-184 (215)
 36 PHA02681 ORF089 virion membran  50.9      34 0.00074   23.7   3.8   27   13-39      7-33  (92)
 37 PF05952 ComX:  Bacillus compet  49.3      17 0.00036   23.5   2.1   25  316-340     4-28  (57)
 38 PF08492 SRP72:  SRP72 RNA-bind  46.6      14 0.00029   24.2   1.4    6  427-432    44-49  (59)
 39 PF15102 TMEM154:  TMEM154 prot  45.4      12 0.00026   29.6   1.2    6   27-32     82-87  (146)
 40 PF15330 SIT:  SHP2-interacting  44.2      53  0.0012   24.7   4.5    8   41-48     46-53  (107)
 41 PF06796 NapE:  Periplasmic nit  42.6      35 0.00076   22.0   2.8   23   16-38     34-56  (56)
 42 PHA02902 putative IMV membrane  41.2      68  0.0015   21.1   3.9   14   26-39     21-34  (70)
 43 PRK09458 pspB phage shock prot  41.1      22 0.00047   24.4   1.8    6    1-6       1-6   (75)
 44 TIGR02976 phageshock_pspB phag  40.7      48   0.001   23.0   3.4   23    9-31      7-29  (75)
 45 COG3190 FliO Flagellar biogene  39.5      33 0.00072   26.9   2.8   70    8-92     27-96  (137)
 46 PF01102 Glycophorin_A:  Glycop  38.2      46   0.001   25.6   3.4    8   24-31     86-93  (122)
 47 PF15300 INT_SG_DDX_CT_C:  INTS  36.2      44 0.00096   22.4   2.6   16  362-377    39-54  (65)
 48 KOG4189 Uncharacterized conser  35.0 1.9E+02  0.0041   24.3   6.5   66  274-339   112-179 (209)
 49 COG3197 FixS Uncharacterized p  31.8      78  0.0017   20.5   3.0   17    1-17      1-17  (58)
 50 KOG3506 40S ribosomal protein   31.0      23  0.0005   22.4   0.7   11  446-456    12-22  (56)
 51 PF12508 DUF3714:  Protein of u  30.9      14  0.0003   31.4  -0.4   44  362-408    51-95  (200)
 52 PF09201 SRX:  SRX;  InterPro:   27.1      54  0.0012   25.6   2.2   23  453-475    18-40  (148)
 53 PF15050 SCIMP:  SCIMP protein   27.0      93   0.002   23.6   3.3   25    5-29      9-33  (133)
 54 PF12444 Sox_N:  Sox developmen  25.9      49  0.0011   23.5   1.6   19  464-482    61-79  (84)
 55 smart00545 JmjN Small domain f  25.8 1.6E+02  0.0034   17.7   3.9   35   42-76      3-37  (42)
 56 PF05393 Hum_adeno_E3A:  Human   25.3 1.5E+02  0.0032   21.1   3.8   35   10-45     37-71  (94)
 57 cd05024 S-100A10 S-100A10: A s  23.9 2.3E+02  0.0049   20.6   4.7   57  246-309    27-84  (91)
 58 PF13625 Helicase_C_3:  Helicas  23.0 1.3E+02  0.0029   23.4   3.9   40   56-96     75-114 (129)
 59 PRK11875 psbT photosystem II r  21.9      75  0.0016   17.4   1.5   15    6-20      4-18  (31)
 60 PF12249 AftA_C:  Arabinofurano  21.9      37 0.00079   27.7   0.5   57  372-432   109-165 (178)
 61 PF05545 FixQ:  Cbb3-type cytoc  20.9      87  0.0019   19.4   1.9   11   16-26     20-30  (49)

No 1  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.4e-81  Score=588.59  Aligned_cols=458  Identities=26%  Similarity=0.393  Sum_probs=362.7

Q ss_pred             HHHHhcCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCCcEEEecCCcceEEecCCcchHHhhhccccccCC--Cc
Q 035793           27 IKIYSGKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQPTFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSK--GE  104 (510)
Q Consensus        27 ~~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~--~~  104 (510)
                      ..+|+++++|||+++|++||+..+.............|.++++++.+..+.++.++|+||+++++|+.++++.|..  ++
T Consensus        25 ~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~  104 (499)
T KOG0158|consen   25 YSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRP  104 (499)
T ss_pred             hhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCC
Confidence            3489999999999999999998886643333333444444445789999999999999999999999999999988  44


Q ss_pred             chhhhhhhhccCceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHH
Q 035793          105 YNQDILEDLFGQGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDS  184 (510)
Q Consensus       105 ~~~~~~~~~~g~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  184 (510)
                      ...+....+...+++...|++||++|..++|.||+.+++++. .++++..++|++.+++....++.+++.+.+.+++.||
T Consensus       105 ~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~-~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DV  183 (499)
T KOG0158|consen  105 IYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMF-PTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDV  183 (499)
T ss_pred             CcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHHHH-HHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHH
Confidence            443322233346789999999999999999999999999988 5889999999999998655446788999999999999


Q ss_pred             HHHhhccccCCCCCCCCCCcchHHHHHHHHHHH-HH-----HhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHH
Q 035793          185 IFKVGFGVDLNCLDGSSGEGTEFMKAFDESNAL-VY-----WRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLIST  258 (510)
Q Consensus       185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  258 (510)
                      |++++||.+.++..++.   .++.......... ..     ......++.+.+.+...  .-.....+.+.+.+...++.
T Consensus       184 I~~~AfG~~~~s~~d~~---~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~--~~~~~~~~~~~~~v~~~v~~  258 (499)
T KOG0158|consen  184 IGSCAFGLDANSLRDPK---AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVK--LFPEDVTDFFRKLVNSRVEQ  258 (499)
T ss_pred             HhHhhcccchhhhcCch---HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcc--cChHHHHHHHHHHHHHHHHH
Confidence            99999999998877544   3343322222222 11     11111122222222111  11223334444445555554


Q ss_pred             HHHHHHhhccCCccccHHHHHHhhccC----CC-C-CCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHH
Q 035793          259 KRNLLAMQQDSNEKEDILSRFLLASEK----DP-D-KMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIE  332 (510)
Q Consensus       259 ~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~-~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~  332 (510)
                      |    ..+.  ....|+++.|++.+++    .. . .+|.++++++++.+++||.||||++++.++|+||+|||+|+|||
T Consensus       259 R----~~~~--~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLr  332 (499)
T KOG0158|consen  259 R----EKEN--IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLR  332 (499)
T ss_pred             H----HhcC--CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHH
Confidence            4    2221  4688999999998743    11 1 59999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEecccc
Q 035793          333 QEVRDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAM  412 (510)
Q Consensus       333 ~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~  412 (510)
                      +||+++..+...          +|++.+.+|+||++||+||||+||+++...|++++|.++.+|+.||||+.|.+++|++
T Consensus       333 eEI~~~~~~~~~----------ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~al  402 (499)
T KOG0158|consen  333 EEIDEVLEEKEG----------LTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYAL  402 (499)
T ss_pred             HHHHHHhcccCC----------CCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccc
Confidence            999999763331          5999999999999999999999999999999999998883399999999999999999


Q ss_pred             ccCCCCccCCCCCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeee-
Q 035793          413 GRMPSIWGENAEEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRT-  491 (510)
Q Consensus       413 ~~d~~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~-  491 (510)
                      ||||++| |||++|+||||.+.... ..++..|+|||.|||.|+|.+||.+|+|+.|++||++|+++..+.+.+. ... 
T Consensus       403 H~Dp~~~-p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~-~~~~  479 (499)
T KOG0158|consen  403 HHDPEYW-PEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIP-LEGD  479 (499)
T ss_pred             cCCcccC-CCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCc-ccCC
Confidence            9999999 99999999999953322 4468899999999999999999999999999999999999998844333 433 


Q ss_pred             --eeEEecCCceeEEEEecC
Q 035793          492 --MFTLHMDGGLHVYAISRK  509 (510)
Q Consensus       492 --~~~~~~~~~~~~~~~~r~  509 (510)
                        +.++.|++++++++.+|.
T Consensus       480 ~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  480 PKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ccceeeecCCceEEEEEeCC
Confidence              788999999999999984


No 2  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.5e-80  Score=587.27  Aligned_cols=454  Identities=28%  Similarity=0.405  Sum_probs=366.8

Q ss_pred             cCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhh
Q 035793           32 GKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDIL  110 (510)
Q Consensus        32 ~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~  110 (510)
                      .+.||||+++|+|||++++...  .+|..+.+|+++|| +|.+++|..++||++|++.++|+|.++...|+.|+......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            4459999999999999887543  58999999999997 79999999999999999999999999988999988622233


Q ss_pred             hhhc--cCceeec-CCchHHhhhhhcc-CCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHH
Q 035793          111 EDLF--GQGIFAV-DGDKWRQQRKLAS-FEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIF  186 (510)
Q Consensus       111 ~~~~--g~~l~~~-~~~~w~~~R~~~~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  186 (510)
                      ..+.  +.++..+ +|+.||.+||... ..++...++... ...+++++.+++.+.+ ...+++||+...+..++.++|+
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~-~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~  180 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFM-EIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVIC  180 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhH-HHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHH
Confidence            3333  2566666 8999999999755 458888888876 5668899999999987 3333899999999999999999


Q ss_pred             HhhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhh-hhhhccc--CchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035793          187 KVGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWK-LKRISNI--GSEASLKKNIKVIDDFVHNLISTKRNLL  263 (510)
Q Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (510)
                      +++||.++...++.  ...++.+.+..............+.+ +.+++++  +..+.......++.+++++.++++.+..
T Consensus       181 ~~~fG~rf~~~~~~--~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  181 RMLFGRRFEEEDEE--EFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHHhCCccccCCch--HHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999875311  22346666666665554333222222 3444432  2345555566669999999999998876


Q ss_pred             HhhccCCccccHHHHHHhhccCCCCC-CChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCC
Q 035793          264 AMQQDSNEKEDILSRFLLASEKDPDK-MDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQ  342 (510)
Q Consensus       264 ~~~~~~~~~~d~l~~ll~~~~~~~~~-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~  342 (510)
                       ..+   ...|++|.|++..++++.. ++++++...+.++++||+|||++|+.|++.+|++||++|+|+++||+++.|..
T Consensus       259 -~~~---~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~  334 (489)
T KOG0156|consen  259 -GDE---EGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG  334 (489)
T ss_pred             -ccC---CCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence             111   2289999999987644333 99999999999999999999999999999999999999999999999999855


Q ss_pred             CCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCC-CcccccCcccCCCeeecCCCEEEEeccccccCCCCccC
Q 035793          343 KNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSD-GRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGE  421 (510)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  421 (510)
                      +          .++.+|+.+||||+|||+|++|++|++|.. +|.+++|+.+ +||.|||||.|+++.|++||||++| +
T Consensus       335 r----------~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i-~Gy~IPkgT~v~vn~~ai~rDp~vw-~  402 (489)
T KOG0156|consen  335 R----------LVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKI-GGYDIPKGTTVLVNLWAIHRDPKVW-E  402 (489)
T ss_pred             C----------CCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeE-cCEEcCCCCEEEEeehhhhcCCccC-C
Confidence            4          259999999999999999999999999987 5667777655 9999999999999999999999999 8


Q ss_pred             CCCCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCce
Q 035793          422 NAEEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGGL  501 (510)
Q Consensus       422 ~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  501 (510)
                      ||++|+||||++.+.... ....++|||.|+|+|||..+|.+++.+++|.|+++|||+++++..+.... +.++..+.++
T Consensus       403 dP~eF~PERFl~~~d~~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~-~~~~~~~~pl  480 (489)
T KOG0156|consen  403 DPEEFKPERFLDSNDGKG-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEA-GLTLKKKKPL  480 (489)
T ss_pred             CccccChhhhcCCccccC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCccc-ccceecCCcc
Confidence            999999999996421122 57789999999999999999999999999999999999999862233333 3666777788


Q ss_pred             eEEEEecC
Q 035793          502 HVYAISRK  509 (510)
Q Consensus       502 ~~~~~~r~  509 (510)
                      .+...+|.
T Consensus       481 ~~~~~~r~  488 (489)
T KOG0156|consen  481 KAVPVPRL  488 (489)
T ss_pred             eeeeecCC
Confidence            88877764


No 3  
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=9.8e-78  Score=595.66  Aligned_cols=480  Identities=47%  Similarity=0.795  Sum_probs=372.2

Q ss_pred             HHHhcCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCCcEEEecCCcceEEecCCcchHHhhhccccccCCCcchh
Q 035793           28 KIYSGKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQPTFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQ  107 (510)
Q Consensus        28 ~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~  107 (510)
                      -.|+++++|||+++|++||++.+......+.++..++.++|++|.+++++.+.++++||+.+++++.++...|.+++.+.
T Consensus        25 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  104 (516)
T PLN03195         25 HRWSQRNRKGPKSWPIIGAALEQLKNYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYH  104 (516)
T ss_pred             HHhhccccCCCCCCCeecchHHHHhccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHH
Confidence            35677889999999999998776543333455555555556689999999999999999999999987655687766554


Q ss_pred             hhhhhhccCceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHH
Q 035793          108 DILEDLFGQGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFK  187 (510)
Q Consensus       108 ~~~~~~~g~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (510)
                      .....++|.++++.+|+.|+++|+++++.|+.++++.+.+.++++.++.+.+.+.+....++++|+.+++..++++++++
T Consensus       105 ~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  184 (516)
T PLN03195        105 SYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICK  184 (516)
T ss_pred             HHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHH
Confidence            44445567888888999999999999999999999998865567778888888876444567899999999999999999


Q ss_pred             hhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 035793          188 VGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQQ  267 (510)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  267 (510)
                      ++||.+++..++.. ....+.+.+.............+++.+.++++....+...+..+.+.+++.+.++++.+......
T Consensus       185 ~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  263 (516)
T PLN03195        185 VGFGVEIGTLSPSL-PENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEAR  263 (516)
T ss_pred             HHhCCCccccccCC-CccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99999987654221 11345555544433322233334433333333223344566778888999999988876533211


Q ss_pred             --cCCccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCC--
Q 035793          268 --DSNEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQK--  343 (510)
Q Consensus       268 --~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~--  343 (510)
                        ......|+++.+++..++.+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++..+..  
T Consensus       264 ~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  343 (516)
T PLN03195        264 KSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKE  343 (516)
T ss_pred             cccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccc
Confidence              0013568999999865544456999999999999999999999999999999999999999999999999875320  


Q ss_pred             -CCCC-------cchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccC
Q 035793          344 -NETN-------IDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRM  415 (510)
Q Consensus       344 -~~~~-------~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d  415 (510)
                       .+..       .......++++++.+|||++|||+|+||++|++|...|++.+|+++++||.|||||.|.++.|++|||
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        344 EDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             ccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence             0000       00001236899999999999999999999999999999888887777999999999999999999999


Q ss_pred             CCCccCCCCCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEE
Q 035793          416 PSIWGENAEEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTL  495 (510)
Q Consensus       416 ~~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  495 (510)
                      |++||+||++|+||||++++......+..++|||.|+|.|+|++||++|+++++|.++++|++++.++. +..+....++
T Consensus       424 p~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~  502 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH-PVKYRMMTIL  502 (516)
T ss_pred             hhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC-cceeeeeeEE
Confidence            999988999999999995322122245679999999999999999999999999999999999997643 4444455667


Q ss_pred             ecCCceeEEEEecC
Q 035793          496 HMDGGLHVYAISRK  509 (510)
Q Consensus       496 ~~~~~~~~~~~~r~  509 (510)
                      .|..+++|++++|.
T Consensus       503 ~~~~~~~v~~~~r~  516 (516)
T PLN03195        503 SMANGLKVTVSRRS  516 (516)
T ss_pred             ecCCCEEEEEEeCC
Confidence            89999999999984


No 4  
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.8e-77  Score=587.66  Aligned_cols=463  Identities=31%  Similarity=0.554  Sum_probs=368.4

Q ss_pred             HHHHhcCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEE---EecCCcceEEecCCcchHHhhhccccccCC
Q 035793           27 IKIYSGKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFR---LLGPAQSEIYTTDIRNIEHVLKAKFDKYSK  102 (510)
Q Consensus        27 ~~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~---~~~~~~~~vvv~~p~~ik~il~~~~~~~~~  102 (510)
                      ++-|+++++|||+++|++||+..+.......++++.+...+|+ .+.   .++++.++++|+||+.+++|+.++...|++
T Consensus        25 ~~~~~~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k  104 (500)
T PLN02169         25 FIHKKPHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPK  104 (500)
T ss_pred             HHHhccCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCC
Confidence            5667888999999999999998775544446677777666676 555   466889999999999999999988777888


Q ss_pred             CcchhhhhhhhccCceeecCCchHHhhhhhccCCCCHHHHHHhh-HHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHH
Q 035793          103 GEYNQDILEDLFGQGIFAVDGDKWRQQRKLASFEFSTRVLRDFS-CAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCT  181 (510)
Q Consensus       103 ~~~~~~~~~~~~g~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~-~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  181 (510)
                      ++.+. .....+|.+++.++|+.|+++|+++++.|+...+.... ...+++.++.+++.+++.+.+++++|+.+.+.+++
T Consensus       105 ~~~~~-~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t  183 (500)
T PLN02169        105 GPEFK-KIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFM  183 (500)
T ss_pred             cHHHH-HHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHH
Confidence            76544 33456788999999999999999999999998776432 24556777888888887655677899999999999


Q ss_pred             HHHHHHhhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcch--hhhhhhcccCchHHHHHHHHHHHHHHHHHHHHH
Q 035793          182 LDSIFKVGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPF--WKLKRISNIGSEASLKKNIKVIDDFVHNLISTK  259 (510)
Q Consensus       182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  259 (510)
                      +|++++++||.+.+..+... ...++.+++.............|+  +.+..+++....+...++.+.+.+++.+.|+++
T Consensus       184 ~dvi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r  262 (500)
T PLN02169        184 FDTSSILMTGYDPMSLSIEM-LEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSR  262 (500)
T ss_pred             HHHHHhheeCCCccccCCCC-CCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876543211 113455554444433322333332  122233444456777888999999999999988


Q ss_pred             HHHHHhh-ccCCccccHHHHHHhhccCC---CCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHH
Q 035793          260 RNLLAMQ-QDSNEKEDILSRFLLASEKD---PDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEV  335 (510)
Q Consensus       260 ~~~~~~~-~~~~~~~d~l~~ll~~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei  335 (510)
                      ++..... +..+...|+++.+++..+.+   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||
T Consensus       263 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei  342 (500)
T PLN02169        263 RKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEI  342 (500)
T ss_pred             HHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence            7643211 10012368999999764321   2247889999999999999999999999999999999999999999999


Q ss_pred             HhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccC
Q 035793          336 RDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRM  415 (510)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d  415 (510)
                      +++.                +.+|+++|||++|||+|+||++|++|...|++.+|+++++||.|||||.|.+++|++|||
T Consensus       343 ~~v~----------------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd  406 (500)
T PLN02169        343 NTKF----------------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRM  406 (500)
T ss_pred             HhhC----------------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCC
Confidence            8764                678899999999999999999999999999998888877999999999999999999999


Q ss_pred             CCCccCCCCCccCCccCCC-CCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeE
Q 035793          416 PSIWGENAEEFRPERWLEN-GIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFT  494 (510)
Q Consensus       416 ~~~~~~~p~~F~P~R~l~~-~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  494 (510)
                      |++||+||++|+||||+++ +......+..|+|||+|+|.|+|++||.+|+|+++|+|+++|+|+++++. ++.+....+
T Consensus       407 ~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~-~~~~~~~~~  485 (500)
T PLN02169        407 RSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH-KIEAIPSIL  485 (500)
T ss_pred             ccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC-CcccccceE
Confidence            9999879999999999943 22111236789999999999999999999999999999999999997643 444556678


Q ss_pred             EecCCceeEEEEec
Q 035793          495 LHMDGGLHVYAISR  508 (510)
Q Consensus       495 ~~~~~~~~~~~~~r  508 (510)
                      ++|+.+++|++++|
T Consensus       486 l~~~~gl~l~l~~~  499 (500)
T PLN02169        486 LRMKHGLKVTVTKK  499 (500)
T ss_pred             EecCCCEEEEEEeC
Confidence            89999999999987


No 5  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.3e-77  Score=584.37  Aligned_cols=461  Identities=35%  Similarity=0.579  Sum_probs=385.2

Q ss_pred             hcCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhh
Q 035793           31 SGKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDI  109 (510)
Q Consensus        31 ~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~  109 (510)
                      +...+|||+++|++|+++.+......+..++.++..+|| .|..++++.+.|+++||+.+++|+.++.+.+.+.+.+.+.
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            355699999999999999886433567889999999996 8999999999999999999999997655778888888888


Q ss_pred             hhhhccCceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHhh
Q 035793          110 LEDLFGQGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKVG  189 (510)
Q Consensus       110 ~~~~~g~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  189 (510)
                      +...+|.+++.++|+.|+++|++++++|+.+.++.+.. .+.+....+...+...+ .++.+|+.+.++++++|+++.++
T Consensus       113 ~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~-~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~~~~  190 (497)
T KOG0157|consen  113 LKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFVP-VFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIICKTA  190 (497)
T ss_pred             HHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHHH-HHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999985 55566666666655532 33349999999999999999999


Q ss_pred             ccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 035793          190 FGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQQDS  269 (510)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  269 (510)
                      ||...  .+.......++.+++.............|+ ....+......++..++.+.+.+++++.|++|++....+...
T Consensus       191 ~G~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~  267 (497)
T KOG0157|consen  191 MGPES--LDAEGPELFEYVQAFDDLTELISKRINLPL-GTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSG  267 (497)
T ss_pred             cCCcc--ccccCCcccHHHHHHHHHHHHHHHHHcCch-hhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            99222  121222346888888888888877777774 333333334678899999999999999999999876543321


Q ss_pred             --CccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCCCC
Q 035793          270 --NEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKNETN  347 (510)
Q Consensus       270 --~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~~~~  347 (510)
                        ....|+++.+....+   ..++++++.+++.++++||+|||+++++|++++|+.||++|+|+++|++++.++.+.+  
T Consensus       268 ~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~--  342 (497)
T KOG0157|consen  268 EEKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK--  342 (497)
T ss_pred             ccchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC--
Confidence              346788886333322   5799999999999999999999999999999999999999999999999999744321  


Q ss_pred             cchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCCcc
Q 035793          348 IDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEEFR  427 (510)
Q Consensus       348 ~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~F~  427 (510)
                             ....+.++|+|+++||+||||||||+|...|.+.+|+++.+||.||||+.|.++++++|||+.+|++||++||
T Consensus       343 -------~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~  415 (497)
T KOG0157|consen  343 -------WEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFD  415 (497)
T ss_pred             -------CChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcC
Confidence                   1222223799999999999999999999999999999886799999999999999999999999977999999


Q ss_pred             CCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCceeEEEEe
Q 035793          428 PERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGGLHVYAIS  507 (510)
Q Consensus       428 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (510)
                      ||||++++.....++..|+|||+|+|.|+|++||.+|+|+++++++++|+|++..+.. +......+++|+.+++|++++
T Consensus       416 PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-~~~~~~~~l~~~~gl~v~~~~  494 (497)
T KOG0157|consen  416 PERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-PKPVPELTLRPKNGLKVKLRP  494 (497)
T ss_pred             ccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-ceeeeEEEEEecCCeEEEEEe
Confidence            9999954433345678999999999999999999999999999999999999988643 667788899999999999999


Q ss_pred             cC
Q 035793          508 RK  509 (510)
Q Consensus       508 r~  509 (510)
                      |.
T Consensus       495 r~  496 (497)
T KOG0157|consen  495 RG  496 (497)
T ss_pred             CC
Confidence            96


No 6  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=4.3e-76  Score=584.52  Aligned_cols=459  Identities=22%  Similarity=0.377  Sum_probs=361.2

Q ss_pred             HHHHHhcCCCCCCCCCCCCcchHHHhhhh----------------hhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcc
Q 035793           26 IIKIYSGKSIKDPSYPPVNGTVFHQLLYF----------------NRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRN   88 (510)
Q Consensus        26 ~~~~~~~~~~PgP~~~p~~G~~~~~~~~~----------------~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~   88 (510)
                      +.+++++++||||+++|++||++.+....                ......+.+|+++|| +|.++.++.++|+++||+.
T Consensus        35 ~~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~  114 (516)
T PLN02290         35 IKKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETEL  114 (516)
T ss_pred             HHHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHH
Confidence            35667888999999999999988765321                112235678999997 6899999999999999999


Q ss_pred             hHHhhhccccccCCCcchh-hhhhhhccCceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccC
Q 035793           89 IEHVLKAKFDKYSKGEYNQ-DILEDLFGQGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVA  167 (510)
Q Consensus        89 ik~il~~~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~  167 (510)
                      +++++.++ ..+..++... .......|.++++.+|+.|+++|+++++.|+.++++.+. ..+.++++.+++.|.+....
T Consensus       115 v~~il~~~-~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~-~~i~~~~~~l~~~l~~~~~~  192 (516)
T PLN02290        115 IKELLTKY-NTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYA-GHMVECTKQMLQSLQKAVES  192 (516)
T ss_pred             HHHHHhcC-CCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            99999887 4455444322 123334577888899999999999999999999999988 57788999999999875433


Q ss_pred             -CceeeHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHH
Q 035793          168 -GRVLDMQDMLMRCTLDSIFKVGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIK  246 (510)
Q Consensus       168 -~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  246 (510)
                       ++++|+.+++..++++++++++||.+++..       .++.+.+...............++..++++....+...+..+
T Consensus       193 ~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~  265 (516)
T PLN02290        193 GQTEVEIGEYMTRLTADIISRTEFDSSYEKG-------KQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKG  265 (516)
T ss_pred             CCceEEhHHHHHHHHHHHHHHHHcCCccccc-------hHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHH
Confidence             358999999999999999999999887532       223333333222211111111111223333333455666778


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCccccHHHHHHhhccC---CCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhc
Q 035793          247 VIDDFVHNLISTKRNLLAMQQDSNEKEDILSRFLLASEK---DPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCK  323 (510)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~  323 (510)
                      .+.+++.+.++++++..+.+.......|+++.++++.++   ++..++++++.+++.++++||+|||+++++|++++|++
T Consensus       266 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~  345 (516)
T PLN02290        266 EVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLAS  345 (516)
T ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence            899999999998876544322112357899999976432   22358899999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCC
Q 035793          324 NPLIQEKIEQEVRDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGD  403 (510)
Q Consensus       324 ~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~  403 (510)
                      ||++|+|+++||+++.+..           .++++++++|||++|||+||||++|+++.+.|.+.+|.++ +||.|||||
T Consensus       346 ~P~vq~kl~~Ei~~v~~~~-----------~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i-~g~~IP~Gt  413 (516)
T PLN02290        346 NPTWQDKVRAEVAEVCGGE-----------TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKL-GDLHIPKGL  413 (516)
T ss_pred             CHHHHHHHHHHHHHHhCCC-----------CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeE-CCEEECCCC
Confidence            9999999999999998732           1489999999999999999999999999888888888766 999999999


Q ss_pred             EEEEeccccccCCCCccCCCCCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCC
Q 035793          404 GVYYMAYAMGRMPSIWGENAEEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDD  483 (510)
Q Consensus       404 ~v~~~~~~~~~d~~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~  483 (510)
                      .|+++.|++||||++||+||++|+||||+++..   .....++|||.|+|.|+|+++|.+|+++++++|+++|+++++++
T Consensus       414 ~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~  490 (516)
T PLN02290        414 SIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDN  490 (516)
T ss_pred             EEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCC
Confidence            999999999999999966999999999994321   12457999999999999999999999999999999999999775


Q ss_pred             CCcceeeeeeEEecCCceeEEEEecC
Q 035793          484 TRDVTYRTMFTLHMDGGLHVYAISRK  509 (510)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~r~  509 (510)
                      . ........+..|.++++|++++|.
T Consensus       491 ~-~~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        491 Y-RHAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             c-ccCccceeeecCCCCCeEEEEeCC
Confidence            3 223334678899999999999985


No 7  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.8e-75  Score=577.01  Aligned_cols=458  Identities=18%  Similarity=0.306  Sum_probs=347.5

Q ss_pred             CCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC--cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhh
Q 035793           34 SIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP--TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILE  111 (510)
Q Consensus        34 ~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg--~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~  111 (510)
                      .||||+++|++||++.+..+ ...+.++.+|.++||  +|.+++|++++|+++||+.++++|.++...|++++...  ..
T Consensus        58 lPPGP~~lPiiGnl~~l~~~-~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~--~~  134 (543)
T PLN02971         58 LPPGPTGFPIVGMIPAMLKN-RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY--AQ  134 (543)
T ss_pred             CCcCCCCCCcccchHHhccC-CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc--ch
Confidence            48999999999998876432 224678889999996  58889999999999999999999998877788876432  22


Q ss_pred             hhccCc----eeecCCchHHhhhhhccCC-CCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHH
Q 035793          112 DLFGQG----IFAVDGDKWRQQRKLASFE-FSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIF  186 (510)
Q Consensus       112 ~~~g~~----l~~~~~~~w~~~R~~~~~~-fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  186 (510)
                      ..++.+    ++..+|+.|+++|+++++. ++...+..+. .+++++++.+++.+.+...+++++|+.+.+.++++++++
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLH-DNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHH-HHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            233433    6778899999999999754 5555555554 678888999998887654556789999999999999999


Q ss_pred             HhhccccCCCCCC--CCCCcchHHHHHHHHHHHHHHhh---hcchhhhhhhccc-CchHHHHHHHHHHHHHHHHHHHHHH
Q 035793          187 KVGFGVDLNCLDG--SSGEGTEFMKAFDESNALVYWRY---VDPFWKLKRISNI-GSEASLKKNIKVIDDFVHNLISTKR  260 (510)
Q Consensus       187 ~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~  260 (510)
                      +++||.++...+.  ..+...+..+.+...........   ...+++..+.++. ...+...+..+.+.+++.+.+++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998743210  00011233334444333221111   1111111122221 2233455566778888899998877


Q ss_pred             HHHHhhccCCccccHHHHHHhhccCCCC-CCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhh
Q 035793          261 NLLAMQQDSNEKEDILSRFLLASEKDPD-KMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVT  339 (510)
Q Consensus       261 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~  339 (510)
                      +..+.+.. ....|+++.|++..++++. .++++++.+++.++++||+|||+++++|++++|+.|||+|+|+++||+.+.
T Consensus       294 ~~~~~~~~-~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~  372 (543)
T PLN02971        294 KMWREGKR-TQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVV  372 (543)
T ss_pred             HHHhccCC-CCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            64432211 1246999999986543333 499999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCC-CcccccCcccCCCeeecCCCEEEEeccccccCCCC
Q 035793          340 GGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSD-GRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSI  418 (510)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~  418 (510)
                      +..+          .++++++++|||++|||+|+||++|++|.. .|.+.+|.++ +||.|||||.|+++.|++||||++
T Consensus       373 g~~~----------~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~-~G~~IpkGt~v~~~~~~~~~d~~~  441 (543)
T PLN02971        373 GKER----------FVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTV-AGYHIPKGSQVLLSRYGLGRNPKV  441 (543)
T ss_pred             CCCC----------CCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeE-CCEEECCCCEEEECcHHhcCChhh
Confidence            7433          259999999999999999999999999985 5666777665 999999999999999999999999


Q ss_pred             ccCCCCCccCCccCCCC-CC-CCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceee-eeeEE
Q 035793          419 WGENAEEFRPERWLENG-IF-QPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYR-TMFTL  495 (510)
Q Consensus       419 ~~~~p~~F~P~R~l~~~-~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~-~~~~~  495 (510)
                      | +||++|+||||+++. .. ....+..++|||.|+|.|+|++||.+|+++++|+|+++|+|+++++....+.. ..+++
T Consensus       442 ~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  520 (543)
T PLN02971        442 W-SDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDM  520 (543)
T ss_pred             C-CCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcCcc
Confidence            9 999999999999432 11 11245679999999999999999999999999999999999998754333332 12255


Q ss_pred             ecCCceeEEEEec
Q 035793          496 HMDGGLHVYAISR  508 (510)
Q Consensus       496 ~~~~~~~~~~~~r  508 (510)
                      ..+.++.+.+++|
T Consensus       521 ~~~~~~~~~~~~~  533 (543)
T PLN02971        521 FLSKPLVMVGELR  533 (543)
T ss_pred             cccccceeeeeec
Confidence            4556899999888


No 8  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.1e-74  Score=570.14  Aligned_cols=468  Identities=22%  Similarity=0.329  Sum_probs=353.3

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhh
Q 035793           15 LLCLLSTFSLLIIKIYSGKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVL   93 (510)
Q Consensus        15 ~~~l~~~~~~~~~~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il   93 (510)
                      .+.+++...+...++.+...+|||+++|++||++.+..   .++..+.+++++|| +|.++.+++++|+++||+.+++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il   87 (482)
T PTZ00404         11 FIFYIIHNAYKKYKKIHKNELKGPIPIPILGNLHQLGN---LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMF   87 (482)
T ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCCCeeccHhhhcc---cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHH
Confidence            33333333333344444556999999999999887643   47899999999997 688999999999999999999999


Q ss_pred             hccccccCCCcchhhhhhhhccCceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeH
Q 035793           94 KAKFDKYSKGEYNQDILEDLFGQGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDM  173 (510)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl  173 (510)
                      .++.+.|.+++.........++.++++.+|+.|+++|+++++.|+..+++.+. ..+.+.++.+++.|.+....++.+|+
T Consensus        88 ~~~~~~~~~r~~~~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~-~~i~~~~~~l~~~l~~~~~~~~~vd~  166 (482)
T PTZ00404         88 VDNFDNFSDRPKIPSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIY-DLLDDQVDVLIESMKKIESSGETFEP  166 (482)
T ss_pred             HhcchhhcCCCCcceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccccHH-HHHHHHHHHHHHHHHHHHhcCCccCH
Confidence            87656677665443222233477888899999999999999999999999987 57789999999999875556778999


Q ss_pred             HHHHHHHHHHHHHHhhccccCCCCCCC-CCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHH
Q 035793          174 QDMLMRCTLDSIFKVGFGVDLNCLDGS-SGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFV  252 (510)
Q Consensus       174 ~~~~~~~~~~vi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  252 (510)
                      .+++.+++++++++++||.+++..++. .+...++.+.+..............+..+.............+..+.+.+++
T Consensus       167 ~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (482)
T PTZ00404        167 RYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFI  246 (482)
T ss_pred             HHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999988654321 1111345555544433221111111100100000001112234455666666


Q ss_pred             HHHHHHHHHHHHhhccCCccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHH
Q 035793          253 HNLISTKRNLLAMQQDSNEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIE  332 (510)
Q Consensus       253 ~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~  332 (510)
                      .+.++++.+..+.    ....|+++.++++..+. ...+.+++++++..+++||+|||+++++|++++|++||++|+|++
T Consensus       247 ~~~i~~~~~~~~~----~~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~  321 (482)
T PTZ00404        247 KEKYHEHLKTIDP----EVPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAY  321 (482)
T ss_pred             HHHHHHHHHccCC----CCcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHH
Confidence            6666554432211    23568999999875321 112234588899999999999999999999999999999999999


Q ss_pred             HHHHhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCC-CCcccccCcccCCCeeecCCCEEEEeccc
Q 035793          333 QEVRDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPS-DGRCAETDDILPDGYRVKKGDGVYYMAYA  411 (510)
Q Consensus       333 ~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~G~~v~~~~~~  411 (510)
                      +||+++.++.+          .++++++++|||++|||+|+||++|++|. ..|.+.+|.++.+||.|||||.|.++.++
T Consensus       322 ~Ei~~v~~~~~----------~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a  391 (482)
T PTZ00404        322 NEIKSTVNGRN----------KVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYS  391 (482)
T ss_pred             HHHHHHhcCCC----------CCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHH
Confidence            99999987432          24889999999999999999999999997 47888888665489999999999999999


Q ss_pred             cccCCCCccCCCCCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCc-ceee
Q 035793          412 MGRMPSIWGENAEEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRD-VTYR  490 (510)
Q Consensus       412 ~~~d~~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~  490 (510)
                      +||||++| |||++|+||||++..     ....++|||.|+|.|+|+++|.+|+++++++|+++|+|+++++++. ....
T Consensus       392 ~hrdp~~~-~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  465 (482)
T PTZ00404        392 LGRNEKYF-ENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEE  465 (482)
T ss_pred             hhCCcccc-CCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccc
Confidence            99999999 999999999999531     3568999999999999999999999999999999999998765422 2233


Q ss_pred             eeeEEecCCceeEEEEec
Q 035793          491 TMFTLHMDGGLHVYAISR  508 (510)
Q Consensus       491 ~~~~~~~~~~~~~~~~~r  508 (510)
                      .+.++. +.+++|++++|
T Consensus       466 ~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        466 YGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             cceeec-CCCceeeeecC
Confidence            456666 46799999987


No 9  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.9e-73  Score=564.01  Aligned_cols=454  Identities=25%  Similarity=0.389  Sum_probs=356.0

Q ss_pred             CCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhhh
Q 035793           34 SIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILED  112 (510)
Q Consensus        34 ~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~~  112 (510)
                      .||||+++|++||++.+..   ++++++.+|+++|| +|.+++++.++++++||+++++++.++.+.|++++... ....
T Consensus        35 ~pPgp~~~P~iG~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~-~~~~  110 (517)
T PLN02687         35 LPPGPRGWPVLGNLPQLGP---KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNS-GAEH  110 (517)
T ss_pred             CCccCCCCCccccHHhcCC---chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCcc-chhh
Confidence            3899999999999877643   37889999999997 78999999999999999999999988767788775432 1222


Q ss_pred             h---ccCceeecCCchHHhhhhhcc-CCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHh
Q 035793          113 L---FGQGIFAVDGDKWRQQRKLAS-FEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKV  188 (510)
Q Consensus       113 ~---~g~~l~~~~~~~w~~~R~~~~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  188 (510)
                      +   .+.+++..+|+.|+++|+++. +.|+.++++.+. ..++++++.+++.|.+.. +++++|+.+++..+++|+++.+
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~-~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~  188 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFR-HVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRA  188 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhH-HHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHH
Confidence            2   123466678999999999998 899999999988 588899999999997642 4578999999999999999999


Q ss_pred             hccccCCCCCCCCCCcchHHHHHHHHHHHHHHh-hhcchhhhhhhccc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 035793          189 GFGVDLNCLDGSSGEGTEFMKAFDESNALVYWR-YVDPFWKLKRISNI-GSEASLKKNIKVIDDFVHNLISTKRNLLAMQ  266 (510)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (510)
                      +||.++...++.. ....+.+.+.......... ....++.+ ++++. ...++..+..+.+.+++.+.++++++.....
T Consensus       189 ~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  266 (517)
T PLN02687        189 MVGRRVFAGDGDE-KAREFKEMVVELMQLAGVFNVGDFVPAL-RWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG  266 (517)
T ss_pred             HhCccccccCCcc-hHHHHHHHHHHHHHHhccCcHHHHhhhH-HHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9999986533211 2244555555544332111 11112222 22221 2234566677888889999998887654221


Q ss_pred             ccCCccccHHHHHHhhccC-----CCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCC
Q 035793          267 QDSNEKEDILSRFLLASEK-----DPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGG  341 (510)
Q Consensus       267 ~~~~~~~d~l~~ll~~~~~-----~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~  341 (510)
                      +  ....|+++.+++..++     ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++.+.++
T Consensus       267 ~--~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  344 (517)
T PLN02687        267 S--EEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR  344 (517)
T ss_pred             C--cccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC
Confidence            1  2356999999987543     23469999999999999999999999999999999999999999999999999874


Q ss_pred             CCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCC-CCcccccCcccCCCeeecCCCEEEEeccccccCCCCcc
Q 035793          342 QKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPS-DGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWG  420 (510)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  420 (510)
                      .+          .++.+++++|||++|||+|+||++|+++. ..|.+.+|.++ +||.||+||.|.++.|.+||||++| 
T Consensus       345 ~~----------~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~h~d~~~~-  412 (517)
T PLN02687        345 DR----------LVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEI-NGYHIPKGATLLVNVWAIARDPEQW-  412 (517)
T ss_pred             CC----------CCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeE-CCEEECCCCEEEEecHHhcCCcccC-
Confidence            32          25899999999999999999999999997 47888777665 9999999999999999999999999 


Q ss_pred             CCCCCccCCccCCCCCC----CCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCC--cceee--ee
Q 035793          421 ENAEEFRPERWLENGIF----QPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTR--DVTYR--TM  492 (510)
Q Consensus       421 ~~p~~F~P~R~l~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~--~~  492 (510)
                      +||++|+||||++++..    .......++|||.|+|.|+|+++|.+|+++++|+|+++|+|++.++..  ++...  ..
T Consensus       413 ~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  492 (517)
T PLN02687        413 PDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYG  492 (517)
T ss_pred             CCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccc
Confidence            99999999999953211    012345799999999999999999999999999999999999986532  23222  34


Q ss_pred             eEEecCCceeEEEEecC
Q 035793          493 FTLHMDGGLHVYAISRK  509 (510)
Q Consensus       493 ~~~~~~~~~~~~~~~r~  509 (510)
                      .+..+..++++++++|.
T Consensus       493 ~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        493 LTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             eeeecCCCeEEeeccCC
Confidence            44556668899988884


No 10 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=9.7e-74  Score=565.81  Aligned_cols=457  Identities=21%  Similarity=0.336  Sum_probs=354.4

Q ss_pred             cCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhh
Q 035793           32 GKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDIL  110 (510)
Q Consensus        32 ~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~  110 (510)
                      .+.||||+++|++||++.+..  .+++.++.+++++|| +|++++++.++|+++||+++++++.++...|.+++.+....
T Consensus        27 ~~~pPgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         27 LRLPPGPKGLPIIGNLHQMEK--FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCcCCCCCCeeccHHhcCC--CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            345999999999999987642  236778899999997 68899999999999999999999988766788877543221


Q ss_pred             h-hhccCce-eecCCchHHhhhhhc-cCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHH
Q 035793          111 E-DLFGQGI-FAVDGDKWRQQRKLA-SFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFK  187 (510)
Q Consensus       111 ~-~~~g~~l-~~~~~~~w~~~R~~~-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (510)
                      . ...+..+ +...++.|+++|+.+ .+.|+++++..+. ..++++++.+++.|.+...+++++|+.+.+..++++++++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~-~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~  183 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFR-PVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCR  183 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhH-HHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHH
Confidence            1 1123332 335678999999974 6899999999988 5888999999999987655677999999999999999999


Q ss_pred             hhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcc--cCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 035793          188 VGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISN--IGSEASLKKNIKVIDDFVHNLISTKRNLLAM  265 (510)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  265 (510)
                      ++||.+++..+.   ...++.+.+................++.+++.  ....++..++.+.+.+++.+.++++.+....
T Consensus       184 ~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  260 (499)
T PLN03234        184 QAFGKRYNEYGT---EMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP  260 (499)
T ss_pred             HHhCCcccccch---hHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            999998864431   12444444444332211100101111111111  1224567788899999999999887654221


Q ss_pred             hccCCccccHHHHHHhhccCCC--CCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCC
Q 035793          266 QQDSNEKEDILSRFLLASEKDP--DKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQK  343 (510)
Q Consensus       266 ~~~~~~~~d~l~~ll~~~~~~~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~  343 (510)
                      +   ....|+++.+++..++++  ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.++.+
T Consensus       261 ~---~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~  337 (499)
T PLN03234        261 K---QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKG  337 (499)
T ss_pred             C---CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC
Confidence            1   235689999987654332  35899999999999999999999999999999999999999999999999987432


Q ss_pred             CCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCC-CcccccCcccCCCeeecCCCEEEEeccccccCCCCccCC
Q 035793          344 NETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSD-GRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGEN  422 (510)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~  422 (510)
                                .++++++++|||++|||+|+||++|+++.. .|.+.+|.++ +||.|||||.|++++|.+||||++||+|
T Consensus       338 ----------~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~-~g~~IP~Gt~v~~~~~~~~rd~~~~~~~  406 (499)
T PLN03234        338 ----------YVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKI-GGYDIPAKTIIQVNAWAVSRDTAAWGDN  406 (499)
T ss_pred             ----------CCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeE-CCEEECCCCEEEEehHhhhCCcccccCC
Confidence                      258999999999999999999999999986 5777777665 9999999999999999999999999779


Q ss_pred             CCCccCCccCCCCCC--CCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCC--cc--eeeeeeEEe
Q 035793          423 AEEFRPERWLENGIF--QPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTR--DV--TYRTMFTLH  496 (510)
Q Consensus       423 p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~--~~~~~~~~~  496 (510)
                      |++||||||++++..  .......++|||.|+|.|+|+++|.+|+++++|+|+++|+|+++++..  .+  +...+....
T Consensus       407 P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  486 (499)
T PLN03234        407 PNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMH  486 (499)
T ss_pred             hhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccc
Confidence            999999999953321  122356799999999999999999999999999999999999987532  22  333466666


Q ss_pred             cCCceeEEEEec
Q 035793          497 MDGGLHVYAISR  508 (510)
Q Consensus       497 ~~~~~~~~~~~r  508 (510)
                      |+..+.+..++|
T Consensus       487 ~~~~~~~~~~~~  498 (499)
T PLN03234        487 KKEHLVLAPTKH  498 (499)
T ss_pred             cCCCeEEEeecC
Confidence            777777777665


No 11 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.5e-73  Score=564.58  Aligned_cols=449  Identities=25%  Similarity=0.362  Sum_probs=347.1

Q ss_pred             CCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhh
Q 035793           33 KSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILE  111 (510)
Q Consensus        33 ~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~  111 (510)
                      +.||||+++|++|+++.+..   ..+.++.+|+++|| +|.++.++.++|+++||+++++++.++...|++++... ...
T Consensus        36 ~~ppgp~~~Pl~G~l~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~-~~~  111 (516)
T PLN02183         36 PYPPGPKGLPIIGNMLMMDQ---LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANI-AIS  111 (516)
T ss_pred             CCCcCCCCCCeeccHHhcCC---cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCccc-chh
Confidence            44899999999999876522   24677899999997 78999999999999999999999998766787765432 122


Q ss_pred             hhc---cCceeecCCchHHhhhhh-ccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHH
Q 035793          112 DLF---GQGIFAVDGDKWRQQRKL-ASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFK  187 (510)
Q Consensus       112 ~~~---g~~l~~~~~~~w~~~R~~-~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (510)
                      ...   +.+++..+|+.|+++|++ +.+.|+.+.++.+. .+. ++++.+++.+..  ..|+++|+.+++..++++++++
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~-~~~-~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~~  187 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWA-SVR-DEVDSMVRSVSS--NIGKPVNIGELIFTLTRNITYR  187 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHH-HHH-HHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHHh
Confidence            222   345777899999999998 57899999998877 454 578888888864  3467899999999999999999


Q ss_pred             hhccccCCCCCCCCCCcchHHHHHHHHHHHHHHh-hhcchhhhhhhc-ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 035793          188 VGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWR-YVDPFWKLKRIS-NIGSEASLKKNIKVIDDFVHNLISTKRNLLAM  265 (510)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  265 (510)
                      ++||.+++..+      .++.+.+.......... ....++ +.+++ +....++..+..+.+.+++.+.++++.+..+.
T Consensus       188 ~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  260 (516)
T PLN02183        188 AAFGSSSNEGQ------DEFIKILQEFSKLFGAFNVADFIP-WLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKN  260 (516)
T ss_pred             HhhcCcccchH------HHHHHHHHHHHHHhCCccHHHhcc-hhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99998765321      34555554443322111 111112 22222 22234567778888999999988887664432


Q ss_pred             hcc----CCccccHHHHHHhhccCC-----------CCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHH
Q 035793          266 QQD----SNEKEDILSRFLLASEKD-----------PDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEK  330 (510)
Q Consensus       266 ~~~----~~~~~d~l~~ll~~~~~~-----------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~  330 (510)
                      ++.    .....|+++.+++..+++           +..++++++.+++.++++||+|||+++++|++++|++||++|+|
T Consensus       261 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~k  340 (516)
T PLN02183        261 QNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKR  340 (516)
T ss_pred             cccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHH
Confidence            210    012468999999854321           22589999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEecc
Q 035793          331 IEQEVRDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAY  410 (510)
Q Consensus       331 l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~  410 (510)
                      +++|++++.+..+          .++.+++++|||++|||+|+||++|++|...|++.+|.++ +||.|||||.|.++.|
T Consensus       341 l~~Ei~~v~~~~~----------~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l-~g~~IPkGt~V~~~~~  409 (516)
T PLN02183        341 VQQELADVVGLNR----------RVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEV-AGYFIPKRSRVMINAW  409 (516)
T ss_pred             HHHHHHHHcCCCC----------CCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeE-CCEEECCCCEEEEehh
Confidence            9999999987322          2589999999999999999999999999999888888766 9999999999999999


Q ss_pred             ccccCCCCccCCCCCccCCccCCCCC-CCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCC--cc
Q 035793          411 AMGRMPSIWGENAEEFRPERWLENGI-FQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTR--DV  487 (510)
Q Consensus       411 ~~~~d~~~~~~~p~~F~P~R~l~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~  487 (510)
                      ++||||++| +||++|+||||++++. ....+...|+|||.|+|.|+|+++|.+|+++++|+++++|++++.++..  +.
T Consensus       410 ~~hrd~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~  488 (516)
T PLN02183        410 AIGRDKNSW-EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSEL  488 (516)
T ss_pred             hhcCCcccc-CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCC
Confidence            999999999 9999999999995322 1112356799999999999999999999999999999999999977542  13


Q ss_pred             eeee--eeEEecCCceeEEEEec
Q 035793          488 TYRT--MFTLHMDGGLHVYAISR  508 (510)
Q Consensus       488 ~~~~--~~~~~~~~~~~~~~~~r  508 (510)
                      +...  +.+..++.++.+.+++|
T Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        489 DMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             ChhhccccccccCCCcEEEeecC
Confidence            2222  33333445778888877


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=3.7e-73  Score=562.25  Aligned_cols=457  Identities=21%  Similarity=0.266  Sum_probs=351.7

Q ss_pred             CCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhhh
Q 035793           34 SIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILED  112 (510)
Q Consensus        34 ~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~~  112 (510)
                      .||||+++|++||+..+......++.++.+|+++|| +|.+++++.++|+++||+++++++.++...|+.++...  ...
T Consensus        36 lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~--~~~  113 (519)
T PLN00168         36 LPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA--SSR  113 (519)
T ss_pred             CCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc--chh
Confidence            389999999999987654333457889999999997 68999999999999999999999988767788776532  222


Q ss_pred             hccC--ceee--cCCchHHhhhh-hccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHH
Q 035793          113 LFGQ--GIFA--VDGDKWRQQRK-LASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFK  187 (510)
Q Consensus       113 ~~g~--~l~~--~~~~~w~~~R~-~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (510)
                      ++|.  +++.  .+|+.|+++|| ++++.|+.++++.+. ..+.++++.+++.|.+....++++|+.+.+..++.++++.
T Consensus       114 ~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~-~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~  192 (519)
T PLN00168        114 LLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFA-PARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVL  192 (519)
T ss_pred             hhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHH
Confidence            3332  3333  68999999986 799999999999998 4778899999999987544556789999999999999999


Q ss_pred             hhccccCCCCCCCCCCcchHHHHHHHHHHHHHH--hhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 035793          188 VGFGVDLNCLDGSSGEGTEFMKAFDESNALVYW--RYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAM  265 (510)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  265 (510)
                      ++||.+++...     ...+...+.........  .....++.+.+.......++..++.+.+.+++.++++++++....
T Consensus       193 ~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (519)
T PLN00168        193 MCFGERLDEPA-----VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNH  267 (519)
T ss_pred             HHcCCCcChhh-----HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999875311     12222222222111110  011111222222111224455677888999999999988764321


Q ss_pred             h---c-cC----CccccHHHHHHhhcc--CCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHH
Q 035793          266 Q---Q-DS----NEKEDILSRFLLASE--KDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEV  335 (510)
Q Consensus       266 ~---~-~~----~~~~d~l~~ll~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei  335 (510)
                      .   . ..    ....|+++.|++...  +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||
T Consensus       268 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei  347 (519)
T PLN00168        268 LGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEI  347 (519)
T ss_pred             ccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            1   0 00    114589999997653  223469999999999999999999999999999999999999999999999


Q ss_pred             HhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCC-CcccccCcccCCCeeecCCCEEEEecccccc
Q 035793          336 RDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSD-GRCAETDDILPDGYRVKKGDGVYYMAYAMGR  414 (510)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~  414 (510)
                      +++.++...         .++.+++.+|||++|||+|+||++|+++.. .|.+.+|.++ +||.|||||.|.++.+++||
T Consensus       348 ~~v~~~~~~---------~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~-~g~~IpkGt~v~~~~~~~~~  417 (519)
T PLN00168        348 KAKTGDDQE---------EVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEV-GGYLIPKGATVNFMVAEMGR  417 (519)
T ss_pred             HHHhCCCCC---------CCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccC-CCEEECCCCEEEEChHHHhc
Confidence            999873321         258999999999999999999999999876 6778788766 99999999999999999999


Q ss_pred             CCCCccCCCCCccCCccCCCCC-----CCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCC-cce
Q 035793          415 MPSIWGENAEEFRPERWLENGI-----FQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTR-DVT  488 (510)
Q Consensus       415 d~~~~~~~p~~F~P~R~l~~~~-----~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~  488 (510)
                      ||++| |||++|+||||++++.     ....+...++|||.|+|+|+|++||.+|+++++++|+++|+|++.++.+ ++.
T Consensus       418 d~~~~-~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~  496 (519)
T PLN00168        418 DEREW-ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFA  496 (519)
T ss_pred             Ccccc-CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChh
Confidence            99999 9999999999995321     0112345799999999999999999999999999999999999977532 222


Q ss_pred             eeeeeEEecCCceeEEEEecC
Q 035793          489 YRTMFTLHMDGGLHVYAISRK  509 (510)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~r~  509 (510)
                      ...+++..++.+++|++++|+
T Consensus       497 ~~~~~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        497 EKREFTTVMAKPLRARLVPRR  517 (519)
T ss_pred             hhceeEEeecCCcEEEEEecc
Confidence            223456777889999999985


No 13 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.8e-73  Score=560.21  Aligned_cols=440  Identities=19%  Similarity=0.232  Sum_probs=337.7

Q ss_pred             CCCCCCCCCCCcchHHHhhh--hhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhh
Q 035793           34 SIKDPSYPPVNGTVFHQLLY--FNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDIL  110 (510)
Q Consensus        34 ~~PgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~  110 (510)
                      .||||+++|++||++.+...  .+.+++++.+++++|| +|.++++++++|+++||+++++++.++...|+++..  ...
T Consensus        39 ~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~--~~~  116 (490)
T PLN02500         39 LPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP--RSI  116 (490)
T ss_pred             CCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc--hHH
Confidence            38899999999998765432  1357788999999997 788899999999999999999999887556654321  122


Q ss_pred             hhhcc-CceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHhh
Q 035793          111 EDLFG-QGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKVG  189 (510)
Q Consensus       111 ~~~~g-~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  189 (510)
                      ...+| .+++..+|+.|+++|+++++.|+..+++.+....+++.+..+++.|.+    ++.+|+.+.+.+++++++++++
T Consensus       117 ~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~~~~~~~~~vi~~~~  192 (490)
T PLN02500        117 GGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKE----NSTFSAQDEAKKFTFNLMAKHI  192 (490)
T ss_pred             HHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC----CCCEEehHHHHHHHHHHHHHHH
Confidence            23445 367778999999999999999999998874334556666666666542    4579999999999999999999


Q ss_pred             ccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 035793          190 FGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQQDS  269 (510)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  269 (510)
                      ||.+.+..+     ..++.+.+........   ..+     ..++....++..++.+.+.+++.+.++++++..+.+...
T Consensus       193 fg~~~~~~~-----~~~~~~~~~~~~~~~~---~~~-----~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  259 (490)
T PLN02500        193 MSMDPGEEE-----TEQLKKEYVTFMKGVV---SAP-----LNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDES  259 (490)
T ss_pred             hCCCCCchH-----HHHHHHHHHHHHhhhh---cch-----hcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Confidence            998754211     1223333332222111   011     012222235566778889999999998887654332211


Q ss_pred             CccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCCCCcc
Q 035793          270 NEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKNETNID  349 (510)
Q Consensus       270 ~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  349 (510)
                      ....|+++.+++..     .++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++.+...... . 
T Consensus       260 ~~~~d~l~~ll~~~-----~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~-~-  332 (490)
T PLN02500        260 VEEDDLLGWVLKHS-----NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSG-E-  332 (490)
T ss_pred             CCcchHHHHHHhcc-----CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCC-C-
Confidence            13468999998742     4899999999999999999999999999999999999999999999999874211000 0 


Q ss_pred             hhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCCccCC
Q 035793          350 DFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEEFRPE  429 (510)
Q Consensus       350 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~F~P~  429 (510)
                         ..++++|+++|||++|||+|+||++|++|...|.+.+|.++ +||.|||||.|+++.|++||||++| +||++|+||
T Consensus       333 ---~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~-~G~~IPkGt~V~~~~~~~hrdp~~~-~dP~~F~Pe  407 (490)
T PLN02500        333 ---SELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRY-KGYDIPSGWKVLPVIAAVHLDSSLY-DQPQLFNPW  407 (490)
T ss_pred             ---CCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCcee-CCEEECCCCEEEechhhcccCcccC-CCccccChh
Confidence               12599999999999999999999999999988889888776 9999999999999999999999999 999999999


Q ss_pred             ccCCCCCCC------CCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCceeE
Q 035793          430 RWLENGIFQ------PESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGGLHV  503 (510)
Q Consensus       430 R~l~~~~~~------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (510)
                      ||++++...      ..++..++|||.|+|.|+|+++|.+|+++++|+|+++|+|+++++..... ..  ...+..+++|
T Consensus       408 Rfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-~~--~~~~~~~l~~  484 (490)
T PLN02500        408 RWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-FP--FVDFPKGLPI  484 (490)
T ss_pred             hccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-cc--cccCCCCceE
Confidence            999432111      12356799999999999999999999999999999999999977543221 12  2345579999


Q ss_pred             EEEe
Q 035793          504 YAIS  507 (510)
Q Consensus       504 ~~~~  507 (510)
                      ++++
T Consensus       485 ~~~~  488 (490)
T PLN02500        485 RVRR  488 (490)
T ss_pred             EEEe
Confidence            9875


No 14 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.3e-73  Score=563.55  Aligned_cols=460  Identities=23%  Similarity=0.341  Sum_probs=355.6

Q ss_pred             CCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhhh
Q 035793           34 SIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILED  112 (510)
Q Consensus        34 ~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~~  112 (510)
                      .||||+++|++||++.+.   ..++.++.+++++|| +|++++++.++++++||+++++++.++.+.|++++........
T Consensus        33 ~ppgp~~~pl~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~  109 (514)
T PLN03112         33 LPPGPPRWPIVGNLLQLG---PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHL  109 (514)
T ss_pred             CccCCCCCCeeeeHHhcC---CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceee
Confidence            389999999999998764   237888999999997 6888899999999999999999998776788887654332223


Q ss_pred             hcc--CceeecCCchHHhhhhhc-cCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHhh
Q 035793          113 LFG--QGIFAVDGDKWRQQRKLA-SFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKVG  189 (510)
Q Consensus       113 ~~g--~~l~~~~~~~w~~~R~~~-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  189 (510)
                      .+|  .+++..+|+.|+++|+.+ .+.|+.++++.+. ..+.++++.+++.+.+...+++++|+.+.++++++++++.++
T Consensus       110 ~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~-~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~  188 (514)
T PLN03112        110 AYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFA-KHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRML  188 (514)
T ss_pred             ccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhh-HHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHH
Confidence            344  335667899999999995 5689999999988 477788899888776544457789999999999999999999


Q ss_pred             ccccCCCCCCCC-CCcchHHHHHHHHHHHHHHhhhcchhhhhhhc-ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 035793          190 FGVDLNCLDGSS-GEGTEFMKAFDESNALVYWRYVDPFWKLKRIS-NIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQQ  267 (510)
Q Consensus       190 fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  267 (510)
                      ||.++....... ....++.+++..............+.++.+++ +....++..+..+.+.+++.+.++++++..+...
T Consensus       189 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  268 (514)
T PLN03112        189 LGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKL  268 (514)
T ss_pred             cCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            999875432211 11233444444433221111111111122222 2223456677788888899999888776543211


Q ss_pred             cCCccccHHHHHHhhccCCC-CCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCCC
Q 035793          268 DSNEKEDILSRFLLASEKDP-DKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKNET  346 (510)
Q Consensus       268 ~~~~~~d~l~~ll~~~~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~~~  346 (510)
                      ......|+++.++++.++++ ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+++.++.+   
T Consensus       269 ~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~---  345 (514)
T PLN03112        269 PGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNR---  345 (514)
T ss_pred             cCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCC---
Confidence            11234689999998754433 35899999999999999999999999999999999999999999999999987432   


Q ss_pred             CcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCC-CcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCC
Q 035793          347 NIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSD-GRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEE  425 (510)
Q Consensus       347 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~  425 (510)
                             .++++++++|||++|||+|++|++|+++.. .|.+.+|.++ +||.|||||.|.+++|++||||++| +||++
T Consensus       346 -------~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i-~g~~IPkGt~v~~~~~~~h~d~~~~-~dP~~  416 (514)
T PLN03112        346 -------MVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTI-NGYYIPAKTRVFINTHGLGRNTKIW-DDVEE  416 (514)
T ss_pred             -------cCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeE-cCEEeCCCCEEEEehHHhhCCcccC-CChhh
Confidence                   258999999999999999999999999975 6888888665 8999999999999999999999999 99999


Q ss_pred             ccCCccCCCC-C---CCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCC--cceee--eeeEEec
Q 035793          426 FRPERWLENG-I---FQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTR--DVTYR--TMFTLHM  497 (510)
Q Consensus       426 F~P~R~l~~~-~---~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~--~~~~~~~  497 (510)
                      ||||||++++ .   ........++|||.|+|.|+|+++|.+|+++++++|+++|||++.++..  ++...  .+.++.+
T Consensus       417 F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  496 (514)
T PLN03112        417 FRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPK  496 (514)
T ss_pred             cCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCccccc
Confidence            9999987421 1   1112345799999999999999999999999999999999999976432  23332  3455566


Q ss_pred             CCceeEEEEecC
Q 035793          498 DGGLHVYAISRK  509 (510)
Q Consensus       498 ~~~~~~~~~~r~  509 (510)
                      ..++.++++||.
T Consensus       497 ~~~~~~~~~~r~  508 (514)
T PLN03112        497 AKPLRAVATPRL  508 (514)
T ss_pred             CCCeEEEeecCC
Confidence            779999999983


No 15 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=5.3e-73  Score=557.27  Aligned_cols=464  Identities=24%  Similarity=0.339  Sum_probs=359.0

Q ss_pred             HHHHHHHHHh---cCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccc
Q 035793           22 FSLLIIKIYS---GKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKF   97 (510)
Q Consensus        22 ~~~~~~~~~~---~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~   97 (510)
                      ..|++.++..   .+.||||+++|++|+++.+.   ..++.++.+++++|| +|.++++++++|+++||+++++++.++.
T Consensus        17 ~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~   93 (504)
T PLN00110         17 TRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLG---NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLD   93 (504)
T ss_pred             HHHHHHHHhhcccCCCcccCCCCCeeechhhcC---CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcc
Confidence            3344444433   34499999999999986653   236889999999997 7899999999999999999999999876


Q ss_pred             cccCCCcchhhhhhhhcc--CceeecCCchHHhhhhhccC-CCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHH
Q 035793           98 DKYSKGEYNQDILEDLFG--QGIFAVDGDKWRQQRKLASF-EFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQ  174 (510)
Q Consensus        98 ~~~~~~~~~~~~~~~~~g--~~l~~~~~~~w~~~R~~~~~-~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~  174 (510)
                      ..|++++..........+  .++++.+|+.|+++|+.+++ .|+.++++.+.+ .+.+++..+++.+.+...+|+++|+.
T Consensus        94 ~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~-~i~~~~~~~~~~l~~~~~~g~~~~~~  172 (504)
T PLN00110         94 INFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQ-VRTVELGHMLRAMLELSQRGEPVVVP  172 (504)
T ss_pred             hhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhH-HHHHHHHHHHHHHHHhccCCCcEeHH
Confidence            678877654322222233  45777889999999999985 799999999884 66677788888887655567899999


Q ss_pred             HHHHHHHHHHHHHhhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhh-hcchhhhhhhccc-CchHHHHHHHHHHHHHH
Q 035793          175 DMLMRCTLDSIFKVGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRY-VDPFWKLKRISNI-GSEASLKKNIKVIDDFV  252 (510)
Q Consensus       175 ~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~  252 (510)
                      +++..++++++++++||.++...++  ....++.+++........... ...++.+ .+++. ...+...+..+.+.+++
T Consensus       173 ~~~~~~~~~vi~~~~fg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-~~l~~~~~~~~~~~~~~~~~~~~  249 (504)
T PLN00110        173 EMLTFSMANMIGQVILSRRVFETKG--SESNEFKDMVVELMTTAGYFNIGDFIPSI-AWMDIQGIERGMKHLHKKFDKLL  249 (504)
T ss_pred             HHHHHHHHHHHHHHHhCCcccccCc--hhHHHHHHHHHHHHHHhccccHHHHcchH-hhhCcchHHHHHHHHHHHHHHHH
Confidence            9999999999999999998722111  112445555555443221111 1111112 22221 12345556677788888


Q ss_pred             HHHHHHHHHHHHhhccCCccccHHHHHHhhccC-CCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHH
Q 035793          253 HNLISTKRNLLAMQQDSNEKEDILSRFLLASEK-DPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKI  331 (510)
Q Consensus       253 ~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l  331 (510)
                      .+.++++.+..+..   ....|+++.+++..++ ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+
T Consensus       250 ~~~i~~~~~~~~~~---~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl  326 (504)
T PLN00110        250 TRMIEEHTASAHER---KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRA  326 (504)
T ss_pred             HHHHHHHHhhcccc---ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHH
Confidence            88888776543211   1346899999976533 3456999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCC-CCcccccCcccCCCeeecCCCEEEEecc
Q 035793          332 EQEVRDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPS-DGRCAETDDILPDGYRVKKGDGVYYMAY  410 (510)
Q Consensus       332 ~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~G~~v~~~~~  410 (510)
                      ++|++++.+..+          .++++++++|||++|||+|+||++|+++. ..|.+.+|.++ +||.|||||.|+++.+
T Consensus       327 ~~Ei~~~~~~~~----------~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~  395 (504)
T PLN00110        327 HEEMDQVIGRNR----------RLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEV-NGYYIPKNTRLSVNIW  395 (504)
T ss_pred             HHHHHHHhCCCC----------CCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeee-CCEEECCCCEEEEeHH
Confidence            999999987432          25899999999999999999999999997 57888777665 9999999999999999


Q ss_pred             ccccCCCCccCCCCCccCCccCCCCCCC-C--CCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcc
Q 035793          411 AMGRMPSIWGENAEEFRPERWLENGIFQ-P--ESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDV  487 (510)
Q Consensus       411 ~~~~d~~~~~~~p~~F~P~R~l~~~~~~-~--~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~  487 (510)
                      .+||||++| +||++|+||||++++... .  .+...++|||.|+|.|+|+++|.+|+++++|+|+++|++++.++. ++
T Consensus       396 ~~h~d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~  473 (504)
T PLN00110        396 AIGRDPDVW-ENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV-EL  473 (504)
T ss_pred             HhcCChhhc-CCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC-cc
Confidence            999999999 999999999999432211 1  123479999999999999999999999999999999999997754 33


Q ss_pred             ee--eeeeEEecCCceeEEEEec
Q 035793          488 TY--RTMFTLHMDGGLHVYAISR  508 (510)
Q Consensus       488 ~~--~~~~~~~~~~~~~~~~~~r  508 (510)
                      ..  ..+.++.|+.++.+++++|
T Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        474 NMDEAFGLALQKAVPLSAMVTPR  496 (504)
T ss_pred             CcccccccccccCCCceEeeccC
Confidence            32  3456778889999999988


No 16 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-72  Score=514.98  Aligned_cols=454  Identities=26%  Similarity=0.402  Sum_probs=386.4

Q ss_pred             CCCCCCCCCCcchHHHhh-hhhhHHHHHHHHHhhCC-cEEEe-cCCcceEEecCCcchHHhhhccccccCCCc-ch--hh
Q 035793           35 IKDPSYPPVNGTVFHQLL-YFNRLYDYQTEVAKKQP-TFRLL-GPAQSEIYTTDIRNIEHVLKAKFDKYSKGE-YN--QD  108 (510)
Q Consensus        35 ~PgP~~~p~~G~~~~~~~-~~~~~~~~~~~~~~kyg-~~~~~-~~~~~~vvv~~p~~ik~il~~~~~~~~~~~-~~--~~  108 (510)
                      +|||+++|++|.+..... ...+.|+....++++|| +|... +|+.+.|.+.||++++.++.+. +.++.++ .+  ..
T Consensus        52 IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~~w~  130 (519)
T KOG0159|consen   52 IPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIEPWV  130 (519)
T ss_pred             cCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccchhh
Confidence            899999999999774322 23578999999999997 78888 7888999999999999999987 5677774 11  11


Q ss_pred             hhhhhcc--CceeecCCchHHhhhhhccCC-CCHHHHHHhhHHHHHHHHHHHHHHHhhhcc---CCceeeHHHHHHHHHH
Q 035793          109 ILEDLFG--QGIFAVDGDKWRQQRKLASFE-FSTRVLRDFSCAVFRTNAAKLVKVVSGFAV---AGRVLDMQDMLMRCTL  182 (510)
Q Consensus       109 ~~~~~~g--~~l~~~~~~~w~~~R~~~~~~-fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~~~~  182 (510)
                      .....++  .|++..+|+.|.+.|..+++. +++++++.|.+ ..++.+++|+..++....   +..+.|+.+.+.++++
T Consensus       131 ~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~-~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wsl  209 (519)
T KOG0159|consen  131 AYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLP-QLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSL  209 (519)
T ss_pred             hhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhh-HHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence            2333444  578999999999999999987 88899999994 778999999999987643   3458999999999999


Q ss_pred             HHHHHhhccccCCCCCC-CCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Q 035793          183 DSIFKVGFGVDLNCLDG-SSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRN  261 (510)
Q Consensus       183 ~vi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (510)
                      +.+|.++||.++++... ...+...+++++..++.........|  .+.++++.+.++++.++.+.+.++....|++..+
T Consensus       210 Esi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p--~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~  287 (519)
T KOG0159|consen  210 ESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMP--SLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALE  287 (519)
T ss_pred             HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcc--hHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999764 33456778888888877765555544  6778888889999999999999999999999998


Q ss_pred             HHHhhccC-CccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhC
Q 035793          262 LLAMQQDS-NEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTG  340 (510)
Q Consensus       262 ~~~~~~~~-~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~  340 (510)
                      ..+..... .+..+++..++...     +++.++++.++++++.||.|||+.++.|+||+|++||++|++|++|+..+..
T Consensus       288 ~l~~~~~~~~~~~~~l~~~L~~~-----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p  362 (519)
T KOG0159|consen  288 ELEKQDSAGSEYTGSLLELLLRK-----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLP  362 (519)
T ss_pred             HHHhccccccchhHHHHHHHHHc-----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCC
Confidence            87765421 12233444444432     3789999999999999999999999999999999999999999999999997


Q ss_pred             CCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCcc
Q 035793          341 GQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWG  420 (510)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  420 (510)
                      ...+         .++.+++.++|||+|||||++||||.+|...|...+|.++ +||.|||||.|.++.+.+.+||++| 
T Consensus       363 ~~~~---------~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL-~gY~vPagT~V~l~~~~~~r~~~~F-  431 (519)
T KOG0159|consen  363 SGNS---------ELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVL-SGYHVPAGTLVVLFLYVLGRNPAYF-  431 (519)
T ss_pred             Cccc---------ccchHHHhhCHHHHHHHHhhhceeccccccccccchhcee-ccceecCCCeEEEeehhhccChhhC-
Confidence            4321         2589999999999999999999999999999999999877 9999999999999999999999999 


Q ss_pred             CCCCCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCc
Q 035793          421 ENAEEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGG  500 (510)
Q Consensus       421 ~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  500 (510)
                      ++|++|+|||||+++. ...++..++|||.|+|+|+|+++|++|+-++||+++++|+++..+. .++++...+++.|..+
T Consensus       432 ~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~-~pv~~~~~~il~P~~~  509 (519)
T KOG0159|consen  432 PDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE-EPVEYVYRFILVPNRP  509 (519)
T ss_pred             CCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC-CCccceeEEEEcCCCC
Confidence            9999999999996542 3457899999999999999999999999999999999999999885 5888889999999999


Q ss_pred             eeEEEEecCC
Q 035793          501 LHVYAISRKF  510 (510)
Q Consensus       501 ~~~~~~~r~~  510 (510)
                      +.+++++|.+
T Consensus       510 l~f~f~~r~~  519 (519)
T KOG0159|consen  510 LRFKFRPRNE  519 (519)
T ss_pred             cceeeeeCCC
Confidence            9999999964


No 17 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.2e-71  Score=551.36  Aligned_cols=458  Identities=22%  Similarity=0.300  Sum_probs=337.5

Q ss_pred             cCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhh
Q 035793           32 GKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDIL  110 (510)
Q Consensus        32 ~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~  110 (510)
                      .+.||||+++|++|++..+..+  ..+..+.+|+++|| +|.++++++++|+++||+.+++++.++...|.+++... ..
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~~--~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~-~~  105 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGDD--LNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNV-VF  105 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCCC--chhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcc-hH
Confidence            3469999999999998766432  25788999999997 68889999999999999999999987656676554221 22


Q ss_pred             hhhcc---CceeecCCchHHhhhhhcc-CCCCHHHHHHhhHHHHHHHHHHHHHHHhhhcc-CCceeeHHHHHHHHHHHHH
Q 035793          111 EDLFG---QGIFAVDGDKWRQQRKLAS-FEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAV-AGRVLDMQDMLMRCTLDSI  185 (510)
Q Consensus       111 ~~~~g---~~l~~~~~~~w~~~R~~~~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~~~vi  185 (510)
                      ..+.|   .+++..+|+.|+++|+.+. +.|+.++++.+. ..++++++.+++.|.+... .++.+|+.+.+..+++|++
T Consensus       106 ~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~-~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi  184 (503)
T PLN02394        106 DIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYR-YGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM  184 (503)
T ss_pred             hHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhh-HHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence            22323   3467788999999999986 889999998887 5778889999998876432 3457999999999999999


Q ss_pred             HHhhccccCCCCCCCCCCcchHHHHHHHHHHHHHH---hhhcchhhhhhhcccCchHHHHHHHHHHHH-HHHHHHHHHHH
Q 035793          186 FKVGFGVDLNCLDGSSGEGTEFMKAFDESNALVYW---RYVDPFWKLKRISNIGSEASLKKNIKVIDD-FVHNLISTKRN  261 (510)
Q Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~  261 (510)
                      ++++||.+++..++.  ....+.............   .....++.+.+... ...+........... +....++++++
T Consensus       185 ~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        185 YRMMFDRRFESEDDP--LFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLR-GYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHHhCCCcccccch--hHHHHHHHHHHHHHHhcccccchhhhchHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998754321  112222221211111100   00011111111110 111111122222222 33335566554


Q ss_pred             HHHhhc-cCCccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhC
Q 035793          262 LLAMQQ-DSNEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTG  340 (510)
Q Consensus       262 ~~~~~~-~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~  340 (510)
                      ..+..+ ......|+++.|+++.++  +.++++++..++.++++||+|||+.+++|++++|++||++|+||++||+++.+
T Consensus       262 ~~~~~~~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~  339 (503)
T PLN02394        262 LMSAKGMDKEGLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLG  339 (503)
T ss_pred             HhhhccCCcchhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            322111 112346899999987643  35899999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCC-cccccCcccCCCeeecCCCEEEEeccccccCCCCc
Q 035793          341 GQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDG-RCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIW  419 (510)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~-r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~  419 (510)
                      ..+          .++++++++|||++|||+|+||++|++|... |.+.+|.++ +||.||+||.|.+++|.+||||++|
T Consensus       340 ~~~----------~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i-~g~~IP~Gt~V~~~~~~~~rd~~~~  408 (503)
T PLN02394        340 PGN----------QVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKL-GGYDIPAESKILVNAWWLANNPELW  408 (503)
T ss_pred             CCC----------CCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCccc-CCEEeCCCCEEEEchHHHhCCcccC
Confidence            422          2488999999999999999999999999884 666667554 9999999999999999999999999


Q ss_pred             cCCCCCccCCccCCCCC--CCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceee--e-eeE
Q 035793          420 GENAEEFRPERWLENGI--FQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYR--T-MFT  494 (510)
Q Consensus       420 ~~~p~~F~P~R~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~--~-~~~  494 (510)
                       +||++|+||||++++.  ........++|||.|+|.|+|+++|.+|+++++|+++++|+|++.++.++++..  - ++.
T Consensus       409 -~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  487 (503)
T PLN02394        409 -KNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFS  487 (503)
T ss_pred             -CCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCcee
Confidence             8999999999994321  112235679999999999999999999999999999999999997765333333  2 245


Q ss_pred             EecCCceeEEEEecCC
Q 035793          495 LHMDGGLHVYAISRKF  510 (510)
Q Consensus       495 ~~~~~~~~~~~~~r~~  510 (510)
                      ...+.++.+++.||.|
T Consensus       488 ~~~~~~~~~~~~~r~~  503 (503)
T PLN02394        488 LHIAKHSTVVFKPRSA  503 (503)
T ss_pred             eccCCCceEEeecCCC
Confidence            5466799999999986


No 18 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3.8e-71  Score=541.89  Aligned_cols=443  Identities=41%  Similarity=0.712  Sum_probs=356.4

Q ss_pred             CCCCcchHHHhhhhhhHHHHHHHHHhhCC--cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhhhhccCce
Q 035793           41 PPVNGTVFHQLLYFNRLYDYQTEVAKKQP--TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILEDLFGQGI  118 (510)
Q Consensus        41 ~p~~G~~~~~~~~~~~~~~~~~~~~~kyg--~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~~~~g~~l  118 (510)
                      .++.|++...+.   +.++++..+.+++|  .+.+...+.  ++++||+.+++++..+.+.|.++..+...+...+|.++
T Consensus        49 ~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi  123 (502)
T PLN02426         49 AYLTASWAKDFD---NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGI  123 (502)
T ss_pred             CCccHHHHHhcc---cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCce
Confidence            558888765433   35777777888887  456555554  89999999999998876789887666555666778899


Q ss_pred             eecCCchHHhhhhhccCCCCHHHHHHhh-HHHHHHHHHHHHHHHhhhcc--CCceeeHHHHHHHHHHHHHHHhhccccCC
Q 035793          119 FAVDGDKWRQQRKLASFEFSTRVLRDFS-CAVFRTNAAKLVKVVSGFAV--AGRVLDMQDMLMRCTLDSIFKVGFGVDLN  195 (510)
Q Consensus       119 ~~~~~~~w~~~R~~~~~~fs~~~l~~~~-~~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~vi~~~~fG~~~~  195 (510)
                      ++.+|+.|+++|+.+++.|+..+++.+. ..++++..+.+++.+.+.++  +++++|+.++++++++|+++.++||.+++
T Consensus       124 ~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~  203 (502)
T PLN02426        124 FNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPG  203 (502)
T ss_pred             eecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCc
Confidence            9999999999999999999999998764 24667778888888876542  24689999999999999999999999987


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHhhhc--c-hhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 035793          196 CLDGSSGEGTEFMKAFDESNALVYWRYVD--P-FWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQQDSNEK  272 (510)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  272 (510)
                      ..+... ...++.+++.............  + ++.+.++++.+..++..++.+.+.+++.+.++++++...     ...
T Consensus       204 ~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~-----~~~  277 (502)
T PLN02426        204 CLELSL-PISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF-----SAS  277 (502)
T ss_pred             ccCCCC-CccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc-----CCc
Confidence            655321 2245666665544333222222  2 233334444444567788889999999999998875421     235


Q ss_pred             ccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCCCCcchhc
Q 035793          273 EDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKNETNIDDFV  352 (510)
Q Consensus       273 ~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~  352 (510)
                      .|+++.++++.      .+++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.++...        
T Consensus       278 ~dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~--------  343 (502)
T PLN02426        278 KDLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQE--------  343 (502)
T ss_pred             chHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCC--------
Confidence            69999999764      2678999999999999999999999999999999999999999999998863221        


Q ss_pred             ccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCCccCCccC
Q 035793          353 AKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEEFRPERWL  432 (510)
Q Consensus       353 ~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~F~P~R~l  432 (510)
                       .++++++++|||++|||+|+||++|++|...|++.+|+++++||.||+||.|.+++|++||||++|||||++|+||||+
T Consensus       344 -~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl  422 (502)
T PLN02426        344 -AASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWL  422 (502)
T ss_pred             -CCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccC
Confidence             2599999999999999999999999999999999998887799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCC-cceeeeeeEEecCCceeEEEEecC
Q 035793          433 ENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTR-DVTYRTMFTLHMDGGLHVYAISRK  509 (510)
Q Consensus       433 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~  509 (510)
                      +++.....++..++|||.|+|.|+|+++|.+|++++++.|+++|++++.++.. .+.+..+.+++|+++++|++++|.
T Consensus       423 ~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        423 KNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            64432223456799999999999999999999999999999999999965432 235556788999999999999985


No 19 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=5.8e-72  Score=551.96  Aligned_cols=457  Identities=22%  Similarity=0.365  Sum_probs=342.4

Q ss_pred             CCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhh
Q 035793           33 KSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILE  111 (510)
Q Consensus        33 ~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~  111 (510)
                      +.||||+++|++||++.+..  .+++.++.+|+++|| +|.+++++.++|+++||+.+++++.++...|.+++.......
T Consensus        29 ~~ppgp~~~p~~G~l~~l~~--~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~  106 (502)
T PLN02966         29 KLPPGPSPLPVIGNLLQLQK--LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEF  106 (502)
T ss_pred             CCCcCCCCCCeeccHHhcCC--CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcccee
Confidence            34999999999999987632  347889999999997 688889999999999999999999886566776553321110


Q ss_pred             hhccC-ce-eecCCchHHhhhhh-ccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHh
Q 035793          112 DLFGQ-GI-FAVDGDKWRQQRKL-ASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKV  188 (510)
Q Consensus       112 ~~~g~-~l-~~~~~~~w~~~R~~-~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~  188 (510)
                      ...|. .+ +..+|+.|+++|+. +.+.|+.+++..+. ..++++++.+++.|.+.+.+++++|+.+++..+++++++.+
T Consensus       107 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~-~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~  185 (502)
T PLN02966        107 ISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFK-HVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQ  185 (502)
T ss_pred             eccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHH
Confidence            01222 22 44579999999998 88899999999987 68889999999999876556778999999999999999999


Q ss_pred             hccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhc-ccCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 035793          189 GFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRIS-NIGS-EASLKKNIKVIDDFVHNLISTKRNLLAMQ  266 (510)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (510)
                      +||.+++..++   ...++.+++..............+.++...+ .+.. .+......+...+++.+.++++.+.....
T Consensus       186 ~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (502)
T PLN02966        186 AFGKKYNEDGE---EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK  262 (502)
T ss_pred             HhCCccCccch---HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99998875431   1234444444433222111111111111111 1111 12233455566677777777654322111


Q ss_pred             ccCCccccHHHHHHhhccCC--CCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCC
Q 035793          267 QDSNEKEDILSRFLLASEKD--PDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKN  344 (510)
Q Consensus       267 ~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~  344 (510)
                         ....|+++.+++..+++  +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+++.+..+.
T Consensus       263 ---~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~  339 (502)
T PLN02966        263 ---PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGS  339 (502)
T ss_pred             ---cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCC
Confidence               13468999999765433  3468999999999999999999999999999999999999999999999999863221


Q ss_pred             CCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCC-CcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCC
Q 035793          345 ETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSD-GRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENA  423 (510)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p  423 (510)
                              ..++++|+++|||++|||+|+||++|+++.. .|.+.+|.++ +||.|||||.|.+++|.+||||++|||||
T Consensus       340 --------~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l-~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP  410 (502)
T PLN02966        340 --------TFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKI-AGYDIPAGTTVNVNAWAVSRDEKEWGPNP  410 (502)
T ss_pred             --------CcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeE-ccEEECCCCEEEEecccccCCcccccCCh
Confidence                    1258999999999999999999999999985 6777777555 99999999999999999999999998899


Q ss_pred             CCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCC--cce--eeeeeEEecCC
Q 035793          424 EEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTR--DVT--YRTMFTLHMDG  499 (510)
Q Consensus       424 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~~--~~~~~~~~~~~  499 (510)
                      ++|+||||++++.........++|||.|+|+|+|++||.+|+++++|.|+++|+|++.++..  ..+  ...+....+..
T Consensus       411 ~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~  490 (502)
T PLN02966        411 DEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQ  490 (502)
T ss_pred             hhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCC
Confidence            99999999953221122456899999999999999999999999999999999999987542  122  22344443433


Q ss_pred             ceeEEEEecC
Q 035793          500 GLHVYAISRK  509 (510)
Q Consensus       500 ~~~~~~~~r~  509 (510)
                        ++++.+|+
T Consensus       491 --~~~~~~~~  498 (502)
T PLN02966        491 --HLKLVPEK  498 (502)
T ss_pred             --CeEEEEEe
Confidence              44555554


No 20 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.3e-71  Score=553.26  Aligned_cols=458  Identities=27%  Similarity=0.470  Sum_probs=356.2

Q ss_pred             HHHHHhcCCCCCCCCCC----------------CCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcc
Q 035793           26 IIKIYSGKSIKDPSYPP----------------VNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRN   88 (510)
Q Consensus        26 ~~~~~~~~~~PgP~~~p----------------~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~   88 (510)
                      +...+.+.++|||+.-.                .+||+..+  ..+.++..+.+|+++|| +|++++++.++++++||+.
T Consensus       108 ~~~~~~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i--~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~  185 (633)
T PLN02738        108 LRNGLAKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAV--RGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSI  185 (633)
T ss_pred             HHhhhhhCCCCCchHHHHHcccccccccccCccccCcHHHh--cCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHH
Confidence            46667778899997321                24554333  23568899999999997 7888888889999999999


Q ss_pred             hHHhhhccccccCCCcchhhhhhhhccCceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCC
Q 035793           89 IEHVLKAKFDKYSKGEYNQDILEDLFGQGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAG  168 (510)
Q Consensus        89 ik~il~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~  168 (510)
                      +++|+.++...|.+++.. .......+.+++..+|+.|+++|+.+.+.|+..++..+. .++++.++.+++.|.+...+|
T Consensus       186 i~eIl~~~~~~f~k~~~~-~~~~~~~g~~l~~~dge~wr~rRr~l~p~Fs~~~v~~l~-~~i~~~v~~L~~~L~~~~~~g  263 (633)
T PLN02738        186 AKHILRDNSKAYSKGILA-EILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMI-SLFGQASDRLCQKLDAAASDG  263 (633)
T ss_pred             HHHHHhhCcccCCCcchH-HHHhhccCCceecCCcHHHHHHHHhccHhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhcCC
Confidence            999998775668776543 233344567788889999999999999999999999887 588899999999998766678


Q ss_pred             ceeeHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcch--hh--hhhhcccCchHHHHHH
Q 035793          169 RVLDMQDMLMRCTLDSIFKVGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPF--WK--LKRISNIGSEASLKKN  244 (510)
Q Consensus       169 ~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--l~~~~~~~~~~~~~~~  244 (510)
                      +++|+...+..+++|+++.++||.+++..++.    ..+.+.+.............++  |.  +.+.++ ...++..+.
T Consensus       264 ~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~-~~~~~~~~~  338 (633)
T PLN02738        264 EDVEMESLFSRLTLDIIGKAVFNYDFDSLSND----TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS-PRQRKVAEA  338 (633)
T ss_pred             CcEeHHHHHHHHHHHHHHHHHhCCCccccccc----hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc-hHHHHHHHH
Confidence            89999999999999999999999998764422    2333333333322211111111  11  111111 112344455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhc-------cCCccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHH
Q 035793          245 IKVIDDFVHNLISTKRNLLAMQQ-------DSNEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWF  317 (510)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~  317 (510)
                      .+.+.+++.++++.+.+..+...       ......|+++.|++..    ..++++++.+++..+++||+|||+.+++|+
T Consensus       339 ~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~  414 (633)
T PLN02738        339 LKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWT  414 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHH
Confidence            56666666666665443221110       0123458999998753    358999999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCe
Q 035793          318 FYLLCKNPLIQEKIEQEVRDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGY  397 (510)
Q Consensus       318 l~~l~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~  397 (510)
                      +++|++||++|+||++|++++.++ +          .++++++++||||+|||+|+|||+|+++...|++.+|.++ +||
T Consensus       415 l~~L~~~Pevq~kLreEl~~v~~~-~----------~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i-~gy  482 (633)
T PLN02738        415 FYLLSKEPSVVAKLQEEVDSVLGD-R----------FPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDML-GGY  482 (633)
T ss_pred             HHHHHhCHHHHHHHHHHHHHhcCC-C----------CCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceE-CCE
Confidence            999999999999999999999873 2          2489999999999999999999999999999999888765 999


Q ss_pred             eecCCCEEEEeccccccCCCCccCCCCCccCCccCCCC-C-CCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhh
Q 035793          398 RVKKGDGVYYMAYAMGRMPSIWGENAEEFRPERWLENG-I-FQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRF  475 (510)
Q Consensus       398 ~ip~G~~v~~~~~~~~~d~~~~~~~p~~F~P~R~l~~~-~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~  475 (510)
                      .||+||.|+++.|.+||||++| |||++|+||||++++ . ........++|||.|+|.|+|++||.+|++++||+|+++
T Consensus       483 ~IPkGT~V~~s~~~ihrdp~if-pdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~  561 (633)
T PLN02738        483 PIKRGEDIFISVWNLHRSPKHW-DDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRR  561 (633)
T ss_pred             EECCCCEEEecHHHHhCCcccc-CCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999 999999999998422 1 112235679999999999999999999999999999999


Q ss_pred             ceEEEcCCCCcceeeeeeEEecCCceeEEEEecC
Q 035793          476 FRFKLTDDTRDVTYRTMFTLHMDGGLHVYAISRK  509 (510)
Q Consensus       476 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  509 (510)
                      |+|++.++.+++....+.+..|..+++|++++|.
T Consensus       562 F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        562 FDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             CeeEeCCCCCCcccccceEEeeCCCcEEEEEECC
Confidence            9999987654455555678889999999999984


No 21 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.5e-71  Score=543.41  Aligned_cols=437  Identities=20%  Similarity=0.204  Sum_probs=338.4

Q ss_pred             HHHHHhcCC-CCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCC
Q 035793           26 IIKIYSGKS-IKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKG  103 (510)
Q Consensus        26 ~~~~~~~~~-~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~  103 (510)
                      ...++++++ ||||+++|++||++.+..+   +..++++++++|| +|+++++++++++++||+.+++++.++...|.++
T Consensus        23 ~~~~~~r~~~ppgp~~~P~~G~~~~~~~~---~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~   99 (463)
T PLN02774         23 NEVRYSKKGLPPGTMGWPLFGETTEFLKQ---GPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPG   99 (463)
T ss_pred             HhhccCCCCCCCCCCCCCchhhHHHHHHh---hHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEec
Confidence            344444444 7899999999998876543   5678899999997 7899999999999999999999998765566443


Q ss_pred             cchhhhhhhhcc-CceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHH
Q 035793          104 EYNQDILEDLFG-QGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTL  182 (510)
Q Consensus       104 ~~~~~~~~~~~g-~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  182 (510)
                      .. .... ..+| .+++..+|+.|+++|+++.+.|++..++.+....+++.++.+++.|..    ++++|+.+.+..+++
T Consensus       100 ~~-~~~~-~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~  173 (463)
T PLN02774        100 YP-QSML-DILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMAL  173 (463)
T ss_pred             CC-HHHH-HHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHH
Confidence            22 2222 3455 467778999999999999999999988763235667777777776642    357999999999999


Q ss_pred             HHHHHhhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 035793          183 DSIFKVGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNL  262 (510)
Q Consensus       183 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (510)
                      ++++.++||.+.+...      .++.+.+.....   ....     +..+++....++..++.+.+.+++.+.++++.+.
T Consensus       174 ~~~~~~~~g~~~~~~~------~~~~~~~~~~~~---~~~~-----~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~  239 (463)
T PLN02774        174 LSALKQIAGTLSKPIS------EEFKTEFFKLVL---GTLS-----LPIDLPGTNYRSGVQARKNIVRMLRQLIQERRAS  239 (463)
T ss_pred             HHHHHHHcCCCChHHH------HHHHHHHHHHhc---cccc-----CCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999997542110      122222211110   0001     1112222223556677888888888888887543


Q ss_pred             HHhhccCCccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCC
Q 035793          263 LAMQQDSNEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQ  342 (510)
Q Consensus       263 ~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~  342 (510)
                      .      ....|+++.+++... ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+..
T Consensus       240 ~------~~~~d~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~  312 (463)
T PLN02774        240 G------ETHTDMLGYLMRKEG-NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERK  312 (463)
T ss_pred             C------CCcccHHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcc
Confidence            1      235799999997432 233589999999999999999999999999999999999999999999999998632


Q ss_pred             CCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCC
Q 035793          343 KNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGEN  422 (510)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~  422 (510)
                      +.+       ..++++++++|||++|||+|+||++|+++...|.+.+|.++ +||.||||+.|+++++.+||||++| +|
T Consensus       313 ~~~-------~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l-~g~~IpkGt~v~~~~~~~~rdp~~~-~d  383 (463)
T PLN02774        313 RPE-------DPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMEL-NGYVIPKGWRIYVYTREINYDPFLY-PD  383 (463)
T ss_pred             CCC-------CCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeE-CCEEECCCCEEEEehHHhcCCcccC-CC
Confidence            111       13589999999999999999999999999888889888776 9999999999999999999999999 99


Q ss_pred             CCCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCcee
Q 035793          423 AEEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGGLH  502 (510)
Q Consensus       423 p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (510)
                      |++|+||||++++..   ....++|||+|+|.|||+++|.+|++++++.|+++|+|++.++. ++...  ..+.|+++++
T Consensus       384 P~~F~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~-~~~~~--~~~~p~~g~~  457 (463)
T PLN02774        384 PMTFNPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGD-KLMKF--PRVEAPNGLH  457 (463)
T ss_pred             hhccCchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCC-ccccC--CCCCCCCCce
Confidence            999999999953321   12369999999999999999999999999999999999998754 22222  2345889999


Q ss_pred             EEEEe
Q 035793          503 VYAIS  507 (510)
Q Consensus       503 ~~~~~  507 (510)
                      |+++|
T Consensus       458 ~~~~~  462 (463)
T PLN02774        458 IRVSP  462 (463)
T ss_pred             EEeee
Confidence            99875


No 22 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=6.7e-70  Score=535.80  Aligned_cols=460  Identities=19%  Similarity=0.261  Sum_probs=338.1

Q ss_pred             CCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhC--CcEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhhh
Q 035793           35 IKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQ--PTFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILED  112 (510)
Q Consensus        35 ~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~ky--g~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~~  112 (510)
                      ||||+++|++||++.+..... ...++.++.++|  ++|.++++++++|+|+||+.+++++.++...|++++... ....
T Consensus        42 PPgp~~~P~iGnl~~l~~~~~-~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~-~~~~  119 (534)
T PLN03018         42 PPGPPGWPILGNLPELIMTRP-RSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLS-IMET  119 (534)
T ss_pred             CcCCCCCCeeccHHHhccCCC-cchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCch-hhhh
Confidence            899999999999988643211 112344444443  579999999999999999999999998767788876543 2222


Q ss_pred             hcc--Cceeec-CCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHhh
Q 035793          113 LFG--QGIFAV-DGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKVG  189 (510)
Q Consensus       113 ~~g--~~l~~~-~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  189 (510)
                      +..  .+++.. +|+.|+++|+++++.|......+....+.+++++.+++.+.+....++++|+.+.+.+++++++++++
T Consensus       120 l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~  199 (534)
T PLN03018        120 IGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRML  199 (534)
T ss_pred             hccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHH
Confidence            211  245555 59999999999999876655555554566677888999998654456689999999999999999999


Q ss_pred             ccccCCCCCCCCCCcchHHHHH----HHHHHHHHHhh-hcchhhhhhhcc----cCchHHHHHHHHHHHHHHHHHHHHHH
Q 035793          190 FGVDLNCLDGSSGEGTEFMKAF----DESNALVYWRY-VDPFWKLKRISN----IGSEASLKKNIKVIDDFVHNLISTKR  260 (510)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~  260 (510)
                      ||.++...+........+.+.+    ........... ..+...+.+++.    ....+......+.+.+++.+.+++++
T Consensus       200 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  279 (534)
T PLN03018        200 FGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERV  279 (534)
T ss_pred             hCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999865321110001111222    21111111100 011011111211    11223344456678888888888887


Q ss_pred             HHHHhhccCCccccHHHHHHhhccCCCC-CCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhh
Q 035793          261 NLLAMQQDSNEKEDILSRFLLASEKDPD-KMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVT  339 (510)
Q Consensus       261 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~  339 (510)
                      +..+.........|+++.|++..++++. .++++++.+++.++++||+|||+++++|++++|+.||++|+|+++||+.+.
T Consensus       280 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~  359 (534)
T PLN03018        280 ELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVV  359 (534)
T ss_pred             HHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence            6433211111246899999987654443 489999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCC-CcccccCcccCCCeeecCCCEEEEeccccccCCCC
Q 035793          340 GGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSD-GRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSI  418 (510)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~  418 (510)
                      +..+          .++.+++.+|||++|||+|+||++|++|.. .|.+.+|.++ +||.|||||.|+++.|++||||++
T Consensus       360 ~~~~----------~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i-~G~~IpkGt~V~~~~~~~~~dp~~  428 (534)
T PLN03018        360 GKDR----------LVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTL-GGYFIPKGSHIHVCRPGLGRNPKI  428 (534)
T ss_pred             CCCC----------CCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeE-CCEEECCCCEEEEChHHhcCCccc
Confidence            7332          258999999999999999999999999988 4667777666 999999999999999999999999


Q ss_pred             ccCCCCCccCCccCCCCCC-C----CCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCccee--ee
Q 035793          419 WGENAEEFRPERWLENGIF-Q----PESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTY--RT  491 (510)
Q Consensus       419 ~~~~p~~F~P~R~l~~~~~-~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~--~~  491 (510)
                      | +||++|+||||+++... .    ......++|||.|+|.|+|+++|.+|+++++|+|+++|++++.++..+++.  ..
T Consensus       429 ~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  507 (534)
T PLN03018        429 W-KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDD  507 (534)
T ss_pred             C-CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccc
Confidence            9 99999999999943211 1    123567999999999999999999999999999999999998775433333  22


Q ss_pred             eeEEecCCceeEEEEecC
Q 035793          492 MFTLHMDGGLHVYAISRK  509 (510)
Q Consensus       492 ~~~~~~~~~~~~~~~~r~  509 (510)
                      +.+ ..+.+++|++++|.
T Consensus       508 ~~~-~~p~~~~v~~~~R~  524 (534)
T PLN03018        508 ASL-LMAKPLLLSVEPRL  524 (534)
T ss_pred             cce-ecCCCeEEEEEecc
Confidence            333 44579999999983


No 23 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=4.7e-70  Score=533.33  Aligned_cols=448  Identities=21%  Similarity=0.270  Sum_probs=344.6

Q ss_pred             CCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhhhh
Q 035793           35 IKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILEDL  113 (510)
Q Consensus        35 ~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~~~  113 (510)
                      ||||+++|++||++++..  ..++.++.+|+++|| +|+++++++++|+|+||+.+++++.++...|++++... ....+
T Consensus         1 ppgp~~lP~iG~l~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~-~~~~~   77 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE--KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSK-ALTVL   77 (466)
T ss_pred             CcCCCCCCccccHHHcCC--CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhh-HHHHH
Confidence            699999999999987743  347899999999997 78999999999999999999999998877888776543 33434


Q ss_pred             ccC--ceeec-CCchHHhhhhhcc-CCCCHHHHHHhhHHHHHHHHHHHHHHHhhhcc--CCceeeHHHHHHHHHHHHHHH
Q 035793          114 FGQ--GIFAV-DGDKWRQQRKLAS-FEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAV--AGRVLDMQDMLMRCTLDSIFK  187 (510)
Q Consensus       114 ~g~--~l~~~-~~~~w~~~R~~~~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~vi~~  187 (510)
                      .+.  .++.. +|+.|+++|+.+. +.|+...++.+. ..+++.++.+++.+.+...  .++++|+.+.++++++++++.
T Consensus        78 ~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~  156 (466)
T PLN02655         78 TRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFR-DTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLI  156 (466)
T ss_pred             hcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhH-HHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHH
Confidence            442  24454 5899999998665 457766776665 5777788888888765432  467899999999999999999


Q ss_pred             hhccccCCCCCCCCCCcch------HHHHHHHHHHHHHHh-hhcchhhhhhhcccCch-HHHHHHHHHHHHHHHHHHHHH
Q 035793          188 VGFGVDLNCLDGSSGEGTE------FMKAFDESNALVYWR-YVDPFWKLKRISNIGSE-ASLKKNIKVIDDFVHNLISTK  259 (510)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~  259 (510)
                      ++||.+++..+... ....      +...+.......... ....++ +.++++.... +...+....+.++++.+++++
T Consensus       157 ~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  234 (466)
T PLN02655        157 QALGEDVESVYVEE-LGTEISKEEIFDVLVHDMMMCAIEVDWRDFFP-YLSWIPNKSFETRVQTTEFRRTAVMKALIKQQ  234 (466)
T ss_pred             HHhccccccccccc-cccchhhHHHHHHHHHHHHHHhCCcchhhhhh-hhhhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999887643211 1111      112222222211100 111122 2233332212 223333444567777887777


Q ss_pred             HHHHHhhccCCccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhh
Q 035793          260 RNLLAMQQDSNEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVT  339 (510)
Q Consensus       260 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~  339 (510)
                      .+..+.+.   ...|+++.++...    ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+.+.
T Consensus       235 ~~~~~~~~---~~~d~l~~ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~  307 (466)
T PLN02655        235 KKRIARGE---ERDCYLDFLLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVC  307 (466)
T ss_pred             HHhhcCCC---CcccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence            65433222   3458999999764    2589999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCC-CcccccCcccCCCeeecCCCEEEEeccccccCCCC
Q 035793          340 GGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSD-GRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSI  418 (510)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~  418 (510)
                      ++..           ++.++++++||++|||+|+||++|+++.. .|.+.+|.++ +||.|||||.|+++.+++||||++
T Consensus       308 ~~~~-----------~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~-~g~~ip~gt~v~~~~~~~~~d~~~  375 (466)
T PLN02655        308 GDER-----------VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTL-GGYDIPAGTQIAINIYGCNMDKKR  375 (466)
T ss_pred             CCCC-----------CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCccc-CCEEECCCCEEEecHHHhcCCccc
Confidence            7422           49999999999999999999999999987 5888888665 999999999999999999999999


Q ss_pred             ccCCCCCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecC
Q 035793          419 WGENAEEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMD  498 (510)
Q Consensus       419 ~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  498 (510)
                      | +||++|+||||++++.. ......++|||.|+|.|||+++|..|+++++++|+++|++++.++..+.....+.++.++
T Consensus       376 ~-~~p~~F~PeR~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  453 (466)
T PLN02655        376 W-ENPEEWDPERFLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKL  453 (466)
T ss_pred             C-CChhccCccccCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeec
Confidence            9 89999999999953221 123467999999999999999999999999999999999999775433333456677888


Q ss_pred             CceeEEEEecC
Q 035793          499 GGLHVYAISRK  509 (510)
Q Consensus       499 ~~~~~~~~~r~  509 (510)
                      .++.|++++|.
T Consensus       454 ~~~~~~~~~r~  464 (466)
T PLN02655        454 HPLHAHLKPRG  464 (466)
T ss_pred             CCcEEEEeecC
Confidence            99999998884


No 24 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.7e-69  Score=531.48  Aligned_cols=455  Identities=27%  Similarity=0.453  Sum_probs=362.9

Q ss_pred             CCCCCCCCCCCCcchHHHhhhh--hhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhh
Q 035793           33 KSIKDPSYPPVNGTVFHQLLYF--NRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDI  109 (510)
Q Consensus        33 ~~~PgP~~~p~~G~~~~~~~~~--~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~  109 (510)
                      +.--|-.|||++|+.+++..+.  +.++..+.+|+++|| +|.+..++.++++++||+++++++.+..+.|.+++.+. .
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~-~   90 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAE-V   90 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhh-h
Confidence            4457889999999999987764  578999999999996 78888999999999999999999987657788765432 3


Q ss_pred             hhhhccCceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHhh
Q 035793          110 LEDLFGQGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKVG  189 (510)
Q Consensus       110 ~~~~~g~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  189 (510)
                      ....+|.+++..+|+.|+++|+++++.|+..++..+.+.++.++++.+++.|.+...+++++|+.+++.++++++++.++
T Consensus        91 ~~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~  170 (489)
T PLN02936         91 SEFLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV  170 (489)
T ss_pred             hHHHhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence            33446778888899999999999999999988888765577888999999998765567799999999999999999999


Q ss_pred             ccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhh-hhcc--cCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 035793          190 FGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLK-RISN--IGSEASLKKNIKVIDDFVHNLISTKRNLLAMQ  266 (510)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (510)
                      ||.+++..+..    .++.+++..............++.+. .++.  .+..+...++.+.+.+++.+.++++++..+..
T Consensus       171 fG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~  246 (489)
T PLN02936        171 FNYNFDSLTTD----SPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAE  246 (489)
T ss_pred             cCCCccccccC----cHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999865422    23444444433322111111111110 0000  11234566778888888888888776543321


Q ss_pred             cc--------CCccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhh
Q 035793          267 QD--------SNEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDV  338 (510)
Q Consensus       267 ~~--------~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~  338 (510)
                      ..        .....|+++.|+...+    .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+
T Consensus       247 ~~~~~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~  322 (489)
T PLN02936        247 GEVIEGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRV  322 (489)
T ss_pred             ccccccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            10        0134689999987542    48899999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCC
Q 035793          339 TGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSI  418 (510)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~  418 (510)
                      .+. +          .++++++++||||+|||+||||++|+++...|++..++++++||.||+|+.|+++.+++||||++
T Consensus       323 ~~~-~----------~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~  391 (489)
T PLN02936        323 LQG-R----------PPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEV  391 (489)
T ss_pred             hcC-C----------CCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhh
Confidence            873 2          14899999999999999999999999998888776666666999999999999999999999999


Q ss_pred             ccCCCCCccCCccCCCCC--CCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEe
Q 035793          419 WGENAEEFRPERWLENGI--FQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLH  496 (510)
Q Consensus       419 ~~~~p~~F~P~R~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  496 (510)
                      | |||++|+||||+.++.  ........++|||.|+|.|+|+++|++|+++++++|+++|+++++++. ++....+++.+
T Consensus       392 ~-~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~  469 (489)
T PLN02936        392 W-ERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ-DIVMTTGATIH  469 (489)
T ss_pred             C-CCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC-ccceecceEEe
Confidence            9 8999999999994321  111224579999999999999999999999999999999999998753 34444567778


Q ss_pred             cCCceeEEEEecC
Q 035793          497 MDGGLHVYAISRK  509 (510)
Q Consensus       497 ~~~~~~~~~~~r~  509 (510)
                      |+.+++|++++|.
T Consensus       470 ~~~~~~v~~~~R~  482 (489)
T PLN02936        470 TTNGLYMTVSRRR  482 (489)
T ss_pred             eCCCeEEEEEeee
Confidence            8899999999984


No 25 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=7e-72  Score=553.02  Aligned_cols=451  Identities=31%  Similarity=0.469  Sum_probs=362.1

Q ss_pred             CCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhh---h
Q 035793           35 IKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDI---L  110 (510)
Q Consensus        35 ~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~---~  110 (510)
                      ||||+++|++||++++.. .+.+++++.+++++|| +|+++.+++++++|+||+++++++.++...++.++.....   .
T Consensus         1 Ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~   79 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFR   79 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccc
Confidence            799999999999999864 4668999999999997 7999999999999999999999999885566654322211   2


Q ss_pred             hhhccCceeecCCchHHhhhhhccCCCCHH-HHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHhh
Q 035793          111 EDLFGQGIFAVDGDKWRQQRKLASFEFSTR-VLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKVG  189 (510)
Q Consensus       111 ~~~~g~~l~~~~~~~w~~~R~~~~~~fs~~-~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~  189 (510)
                      ....+.+++..+++.|+++|+.+.+.|+.. .+ ++. ..+++.++.+++.|.+....++++|+.++++.+++++++.++
T Consensus        80 ~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~-~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   80 GPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLE-PLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHH-HHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccc-ccc-cccccccccccccccccccccceeeeeccccccccccccccc
Confidence            245567888889999999999999999998 55 666 688999999999999876555689999999999999999999


Q ss_pred             ccccCCCCCCCCCCcchHHHHHHHHHHHHHHh---hhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 035793          190 FGVDLNCLDGSSGEGTEFMKAFDESNALVYWR---YVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQ  266 (510)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (510)
                      ||.+++..++..  ..++.+.+..........   ....++ +.++++....+...++.+.+.+++.+.++++.+..+.+
T Consensus       158 fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (463)
T PF00067_consen  158 FGKDFGSLDDED--FEEFLEAFDELFELLSNFFWNLPFFFP-WLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDG  234 (463)
T ss_dssp             HSSHHHGTTHHH--HHHHHHHHHHHHHHHHSHHHHHHHHHH-HHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS
T ss_pred             ccceeeeccccc--ccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence            999987543110  124455555554432111   111122 33344444556677778889999999999988877654


Q ss_pred             ccCCccccHHHHHHhhc-cCCC-CCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCC
Q 035793          267 QDSNEKEDILSRFLLAS-EKDP-DKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKN  344 (510)
Q Consensus       267 ~~~~~~~d~l~~ll~~~-~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~  344 (510)
                      .  ....|+++.++.+. +.++ ..++++++.+++..+++||+|||+.+++|++++|++||++|+++++||+++.++.+ 
T Consensus       235 ~--~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~-  311 (463)
T PF00067_consen  235 D--ESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR-  311 (463)
T ss_dssp             S--SSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS-
T ss_pred             c--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            1  35789999999987 4444 38999999999999999999999999999999999999999999999999996332 


Q ss_pred             CCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCC-CCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCC
Q 035793          345 ETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVP-SDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENA  423 (510)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p  423 (510)
                               .++.+++++||||+|||+|+||++|+++ .+.|.+.+|.++ +||.|||||.|+++.+++|+||++| +||
T Consensus       312 ---------~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l-~g~~ip~gt~v~~~~~~~~~d~~~~-~dp  380 (463)
T PF00067_consen  312 ---------EITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTL-GGYFIPKGTIVIVSIYALHRDPEYF-PDP  380 (463)
T ss_dssp             ---------SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEE-TTEEEETTSEEEEEHHHHTTSTTTS-SST
T ss_pred             ---------ccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccc-ccc
Confidence                     2489999999999999999999999999 567999998777 8999999999999999999999999 999


Q ss_pred             CCccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCc-ceeeeeeEEecCCcee
Q 035793          424 EEFRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRD-VTYRTMFTLHMDGGLH  502 (510)
Q Consensus       424 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~  502 (510)
                      ++|+|+||++...........++|||.|+|.|+|+++|.+|++++||+||++|||+++++... .......++.|+.++.
T Consensus       381 ~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (463)
T PF00067_consen  381 DEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLK  460 (463)
T ss_dssp             TS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSE
T ss_pred             cccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcE
Confidence            999999999543322345778999999999999999999999999999999999999775433 2333323445556777


Q ss_pred             EEE
Q 035793          503 VYA  505 (510)
Q Consensus       503 ~~~  505 (510)
                      |++
T Consensus       461 ~~~  463 (463)
T PF00067_consen  461 VKF  463 (463)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            764


No 26 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.4e-69  Score=526.31  Aligned_cols=425  Identities=19%  Similarity=0.242  Sum_probs=337.8

Q ss_pred             CCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhhh
Q 035793           34 SIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILED  112 (510)
Q Consensus        34 ~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~~  112 (510)
                      .||||+++|++||++.+..  ++++.++.+++++|| +|.++++++++|+++||+.+++++.++.+.|.  +.+......
T Consensus        36 ~Ppgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~~~  111 (463)
T PLN02196         36 LPPGTMGWPYVGETFQLYS--QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASKER  111 (463)
T ss_pred             CCCCCCCCCccchHHHHHh--cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHHHH
Confidence            3778888999999877542  357889999999997 78999999999999999999999987755553  323323334


Q ss_pred             hcc-CceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHhhcc
Q 035793          113 LFG-QGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKVGFG  191 (510)
Q Consensus       113 ~~g-~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG  191 (510)
                      .+| .+++..+|+.|+++|+++.+.|++++++.+.+ .++++++.+++.|.     ++++|+.+++..+++++++.++||
T Consensus       112 ~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~-~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~~fG  185 (463)
T PLN02196        112 MLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVP-DIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALLSIFG  185 (463)
T ss_pred             HcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHH-HHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHHHcC
Confidence            556 46888899999999999999999999999884 67778888887763     347999999999999999999999


Q ss_pred             ccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 035793          192 VDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQQDSNE  271 (510)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  271 (510)
                      .+.....      ..+.+.+.....     ....+   ...++....++..++.+.+.+++.+.++++.+..      ..
T Consensus       186 ~~~~~~~------~~~~~~~~~~~~-----~~~~~---~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~------~~  245 (463)
T PLN02196        186 KDEVLYR------EDLKRCYYILEK-----GYNSM---PINLPGTLFHKSMKARKELAQILAKILSKRRQNG------SS  245 (463)
T ss_pred             CCCchHH------HHHHHHHHHHhc-----chhcc---cccCCCccchHHHHHHHHHHHHHHHHHHHHhhcC------CC
Confidence            8642110      122221111110     00001   1112222235566788888888888888775431      23


Q ss_pred             cccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCCCCcchh
Q 035793          272 KEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKNETNIDDF  351 (510)
Q Consensus       272 ~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~  351 (510)
                      ..|+++.++++    +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+..+.+      
T Consensus       246 ~~d~l~~ll~~----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~------  315 (463)
T PLN02196        246 HNDLLGSFMGD----KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEG------  315 (463)
T ss_pred             cccHHHHHHhc----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccC------
Confidence            56899998853    23589999999999999999999999999999999999999999999999988632211      


Q ss_pred             cccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCCccCCcc
Q 035793          352 VAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEEFRPERW  431 (510)
Q Consensus       352 ~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~F~P~R~  431 (510)
                       ..+++++++++||++|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++++++||||++| +||++|+||||
T Consensus       316 -~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i-~g~~IpkGt~v~~~~~~~~rd~~~~-~dP~~F~PeRf  392 (463)
T PLN02196        316 -ESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEY-EGYLIPKGWKVLPLFRNIHHSADIF-SDPGKFDPSRF  392 (463)
T ss_pred             -CCCCHHHHhcChHHHHHHHHHHhcCCCccccceeecccccc-CCEEeCCCCEEEeeHHHhcCCchhc-CCcCccChhhh
Confidence             13589999999999999999999999999999999888666 9999999999999999999999999 99999999999


Q ss_pred             CCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCceeEEEEec
Q 035793          432 LENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGGLHVYAISR  508 (510)
Q Consensus       432 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  508 (510)
                      +++.     .+..++|||.|+|.|+|+++|++|+++++++|+++|+|++++++.+.  ....+..|+++++|+++..
T Consensus       393 l~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        393 EVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNGI--QYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             cCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCce--EEcccccCCCCceEEEecC
Confidence            9521     35679999999999999999999999999999999999998753333  3333457999999998754


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=6.1e-69  Score=523.91  Aligned_cols=439  Identities=18%  Similarity=0.216  Sum_probs=341.7

Q ss_pred             cCCCCCCCCCCCCcchHHHhhh--hhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhh
Q 035793           32 GKSIKDPSYPPVNGTVFHQLLY--FNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQD  108 (510)
Q Consensus        32 ~~~~PgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~  108 (510)
                      ++.||||+++|++||++.+...  ...++.++.+++++|| +|++++++.++||++||++++++|.++...|+.+.  ..
T Consensus         6 ~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~--~~   83 (452)
T PLN03141          6 SRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY--PK   83 (452)
T ss_pred             CCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC--ch
Confidence            3448899999999999887542  2357889999999997 79999999999999999999999998766666432  12


Q ss_pred             hhhhhccC-ceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHH
Q 035793          109 ILEDLFGQ-GIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFK  187 (510)
Q Consensus       109 ~~~~~~g~-~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~  187 (510)
                      ....++|. +++..+|+.|+++|+++.+.|+...+.......+.+.++.+++.+.    +++++|+.+.+..++++++++
T Consensus        84 ~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~vi~~  159 (452)
T PLN03141         84 SLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAFEVLVK  159 (452)
T ss_pred             hHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHHHHHHH
Confidence            34445664 5788899999999999999998888766433344455555554442    356899999999999999999


Q ss_pred             hhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 035793          188 VGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQQ  267 (510)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  267 (510)
                      ++||.+.+..      ..++.+.+........   ..++     +++....++..++.+.+.+++.+.++++++..+...
T Consensus       160 ~~~G~~~~~~------~~~~~~~~~~~~~~~~---~~~~-----~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  225 (452)
T PLN03141        160 ALISLEPGEE------MEFLKKEFQEFIKGLM---SLPI-----KLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKE  225 (452)
T ss_pred             HHcCCCchHH------HHHHHHHHHHHhhhHH---hCcc-----CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            9999765311      1233333333222111   1111     122222344556788999999999998876543211


Q ss_pred             cC--CccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCC
Q 035793          268 DS--NEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKNE  345 (510)
Q Consensus       268 ~~--~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~~  345 (510)
                      ..  ....|+++.++++.   +..++++++..++..+++||+|||+++++|++++|++||++|+++++|++++.+.....
T Consensus       226 ~~~~~~~~d~l~~ll~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~  302 (452)
T PLN03141        226 EDETGIPKDVVDVLLRDG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADT  302 (452)
T ss_pred             ccccCChhhHHHHHHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCC
Confidence            00  12468999999764   23589999999999999999999999999999999999999999999999886421110


Q ss_pred             CCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCC
Q 035793          346 TNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEE  425 (510)
Q Consensus       346 ~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~  425 (510)
                         +   ..++.+++.+|||++|||+|++|++|+++.+.|.+.+|.++ +||.||||+.|+++.+++||||++| +||++
T Consensus       303 ---~---~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l-~g~~IPkG~~V~~~~~~~~~d~~~~-~dP~~  374 (452)
T PLN03141        303 ---G---EPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEI-KGYLIPKGWCVLAYFRSVHLDEENY-DNPYQ  374 (452)
T ss_pred             ---C---CCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeE-CCEEECCCCEEEEehHhccCCchhc-CCccc
Confidence               0   12589999999999999999999999998888889888776 9999999999999999999999999 99999


Q ss_pred             ccCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCceeEEE
Q 035793          426 FRPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGGLHVYA  505 (510)
Q Consensus       426 F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (510)
                      |+||||+++.    ..+..|+|||.|+|.|+|+++|.+|+++++|+|+++|+|+++++. . .  ...++.|..++.|++
T Consensus       375 F~PeRfl~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~-~-~--~~~~~~~~~~~~~~~  446 (452)
T PLN03141        375 FNPWRWQEKD----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT-I-V--NFPTVRMKRKLPIWV  446 (452)
T ss_pred             cCcccccCCC----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC-e-e--ecccccCCCCceEEE
Confidence            9999999532    135679999999999999999999999999999999999987653 1 1  224778999999999


Q ss_pred             EecC
Q 035793          506 ISRK  509 (510)
Q Consensus       506 ~~r~  509 (510)
                      ++|.
T Consensus       447 ~~~~  450 (452)
T PLN03141        447 TRID  450 (452)
T ss_pred             EeCC
Confidence            9984


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3.9e-68  Score=516.59  Aligned_cols=434  Identities=15%  Similarity=0.197  Sum_probs=335.3

Q ss_pred             CCCCCCCCCCcchHHHhhh--hhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhhhhh
Q 035793           35 IKDPSYPPVNGTVFHQLLY--FNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQDILE  111 (510)
Q Consensus        35 ~PgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~~~~  111 (510)
                      ||||.++|++||++.+...  ..+++.++.+++++|| +|.++++++++|+|+||+++++++.++.+.|+++.. . ...
T Consensus        32 ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~-~-~~~  109 (472)
T PLN02987         32 PPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP-G-SIS  109 (472)
T ss_pred             cCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc-H-HHH
Confidence            8899999999999876432  1347888999999997 788999999999999999999999987667765432 2 233


Q ss_pred             hhcc-CceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHhhc
Q 035793          112 DLFG-QGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKVGF  190 (510)
Q Consensus       112 ~~~g-~~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~f  190 (510)
                      ..+| .+++..+|+.|+++|+++.+.++.+.++.+....+.+..+..++.|      ++++++.+.+.+++++++++++|
T Consensus       110 ~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~t~~vi~~~~f  183 (472)
T PLN02987        110 NLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSW------SSRVLLMEEAKKITFELTVKQLM  183 (472)
T ss_pred             HHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhh------ccceehHHHHHHHHHHHHHHHHc
Confidence            4455 5788889999999999987544444554433211222222333322      24699999999999999999999


Q ss_pred             cccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 035793          191 GVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQQDSN  270 (510)
Q Consensus       191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  270 (510)
                      |.+.+...      ..+.+.+.......   ...+++.+     ....++..++.+++.+++.+.++++++....+.  .
T Consensus       184 g~~~~~~~------~~~~~~~~~~~~~~---~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~--~  247 (472)
T PLN02987        184 SFDPGEWT------ESLRKEYVLVIEGF---FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRRKEEEEGA--E  247 (472)
T ss_pred             CCCChHHH------HHHHHHHHHHHhhh---hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhhhccC--c
Confidence            97653211      22222222221111   11111111     133567778899999999999999876543221  2


Q ss_pred             ccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCCCCcch
Q 035793          271 EKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKNETNIDD  350 (510)
Q Consensus       271 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~  350 (510)
                      ...|+++.+++..+    .++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+.+..+..     
T Consensus       248 ~~~d~l~~ll~~~~----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~-----  318 (472)
T PLN02987        248 KKKDMLAALLASDD----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDS-----  318 (472)
T ss_pred             ccccHHHHHHhcCC----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCC-----
Confidence            35689999997642    589999999999999999999999999999999999999999999999987532211     


Q ss_pred             hcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCCccCCc
Q 035793          351 FVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEEFRPER  430 (510)
Q Consensus       351 ~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~F~P~R  430 (510)
                        ..++++++.++||++||++|+||++|+++...|++.+|.++ +||.||+|+.|+++.+.+||||++| +||++|+|||
T Consensus       319 --~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~-~G~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeR  394 (472)
T PLN02987        319 --YSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEV-KGYTIPKGWKVFASFRAVHLDHEYF-KDARTFNPWR  394 (472)
T ss_pred             --CCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeE-CCEEECCCCEEEEehHHhhCCcccC-CCccccCccc
Confidence              12588999999999999999999999999888989888766 9999999999999999999999999 9999999999


Q ss_pred             cCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCceeEEEEecC
Q 035793          431 WLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGGLHVYAISRK  509 (510)
Q Consensus       431 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  509 (510)
                      |+++... ......++|||.|+|.|+|+++|.+|++++++.|+++|+|+++++. ++.  ...++.|..++++++++|.
T Consensus       395 fl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~--~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        395 WQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD-KLV--FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC-cee--ecccccCCCCceEEEEecc
Confidence            9953321 1234679999999999999999999999999999999999997753 333  3457889999999999985


No 29 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=5e-68  Score=525.58  Aligned_cols=439  Identities=20%  Similarity=0.263  Sum_probs=343.8

Q ss_pred             CCCCCCCCCCCcchHHHhhh--hhhHHHHHHHHHhhCC---cEEEecCCcceEEecCCcchHHhhhccccccCCCcchhh
Q 035793           34 SIKDPSYPPVNGTVFHQLLY--FNRLYDYQTEVAKKQP---TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKGEYNQD  108 (510)
Q Consensus        34 ~~PgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~kyg---~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~~~~~~  108 (510)
                      .||||+++|++|+++.+...  .+++++++.+++++||   +|.+++++.+.++++||+.+++++.++ +.|.++.... 
T Consensus        43 lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~-  120 (490)
T PLN02302         43 LPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPES-  120 (490)
T ss_pred             CcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCchh-
Confidence            38999999999999887543  2357889999999997   478888999999999999999999876 5666543221 


Q ss_pred             hhhhhccC-ceeecCCchHHhhhhhccCCCC-HHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHH
Q 035793          109 ILEDLFGQ-GIFAVDGDKWRQQRKLASFEFS-TRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIF  186 (510)
Q Consensus       109 ~~~~~~g~-~l~~~~~~~w~~~R~~~~~~fs-~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~  186 (510)
                      ... .+|. ++...+|+.|+++|+.+.+.|+ .++++.+.+ .+++.++.+++.+.+    ++.+|+.+.+..+++++++
T Consensus       121 ~~~-~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~-~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~~~vi~  194 (490)
T PLN02302        121 TVE-LIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIP-YIEENVKSCLEKWSK----MGEIEFLTELRKLTFKIIM  194 (490)
T ss_pred             HHH-HhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHH-HHHHHHHHHHHHhcC----CCCEehHHHHHHHHHHHHH
Confidence            222 4453 4566799999999999999995 678888884 677888888887753    2359999999999999999


Q ss_pred             HhhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 035793          187 KVGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQ  266 (510)
Q Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (510)
                      +++||.+.+...      .++.+.+.......  ... +     ...+....++..++.+.+.+++.+.++++.+....+
T Consensus       195 ~~~~G~~~~~~~------~~~~~~~~~~~~~~--~~~-~-----~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  260 (490)
T PLN02302        195 YIFLSSESELVM------EALEREYTTLNYGV--RAM-A-----INLPGFAYHRALKARKKLVALFQSIVDERRNSRKQN  260 (490)
T ss_pred             HHHcCCCChHHH------HHHHHHHHHHHHHh--hhC-C-----cCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            999997653211      22222221111110  000 0     011112233455667888889999998887654322


Q ss_pred             ccCCccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCCC
Q 035793          267 QDSNEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKNET  346 (510)
Q Consensus       267 ~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~~~  346 (510)
                      . +....|+++.++++.++++..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++.+..... 
T Consensus       261 ~-~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~-  338 (490)
T PLN02302        261 I-SPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPG-  338 (490)
T ss_pred             C-CCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCC-
Confidence            1 12457999999987655555699999999999999999999999999999999999999999999999998632110 


Q ss_pred             CcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCCc
Q 035793          347 NIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEEF  426 (510)
Q Consensus       347 ~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~F  426 (510)
                       .    ..++++++++|||++|||+|+||++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|
T Consensus       339 -~----~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~Ip~Gt~v~~~~~~~~rd~~~~-~dP~~F  411 (490)
T PLN02302        339 -Q----KGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEV-NGYTIPKGWKVLAWFRQVHMDPEVY-PNPKEF  411 (490)
T ss_pred             -C----CCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeE-CCEEECCCCEEEeeHHHhcCCcccC-CCcccc
Confidence             0    11489999999999999999999999999988998888666 9999999999999999999999999 999999


Q ss_pred             cCCccCCCCCCCCCCCcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCceeEEEE
Q 035793          427 RPERWLENGIFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGGLHVYAI  506 (510)
Q Consensus       427 ~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (510)
                      +||||++++    ..+..++|||.|+|.|+|+++|.+|+++++++++++|+|++.++..+..+  .....|.+++.++++
T Consensus       412 ~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~--~~~~~p~~~~~~~~~  485 (490)
T PLN02302        412 DPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGCKVMY--LPHPRPKDNCLARIT  485 (490)
T ss_pred             ChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCCccee--CCCCCCCCCceEEEE
Confidence            999999532    23567999999999999999999999999999999999999865323232  223788899999998


Q ss_pred             ecC
Q 035793          507 SRK  509 (510)
Q Consensus       507 ~r~  509 (510)
                      +|.
T Consensus       486 ~~~  488 (490)
T PLN02302        486 KVA  488 (490)
T ss_pred             ecc
Confidence            874


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.5e-67  Score=465.33  Aligned_cols=450  Identities=21%  Similarity=0.325  Sum_probs=361.0

Q ss_pred             HHHHhcC-CCCCCCC-CCCCcchHHHhhhhhhHHHHHHHHHhhCC-cEEEecCCcceEEecCCcchHHhhhccccccCCC
Q 035793           27 IKIYSGK-SIKDPSY-PPVNGTVFHQLLYFNRLYDYQTEVAKKQP-TFRLLGPAQSEIYTTDIRNIEHVLKAKFDKYSKG  103 (510)
Q Consensus        27 ~~~~~~~-~~PgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~kyg-~~~~~~~~~~~vvv~~p~~ik~il~~~~~~~~~~  103 (510)
                      .+..+.+ .||--.| .||+|+++.|.++   +.+++++.++||| +|++..+|+.+.++.+|+....+++...+.++..
T Consensus        24 ~~~r~~~~~PPli~gwiP~lG~a~~fgk~---P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~  100 (486)
T KOG0684|consen   24 LQRRTSRKEPPLIKGWIPWLGSALAFGKD---PLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFE  100 (486)
T ss_pred             HhcccCCCCCcccccCcchhhHHHHhccC---HHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHH
Confidence            3333343 5777666 4999999998766   9999999999998 7999999999999999999999998875677777


Q ss_pred             cchhhhhhhhccCceee-cCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHH
Q 035793          104 EYNQDILEDLFGQGIFA-VDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTL  182 (510)
Q Consensus       104 ~~~~~~~~~~~g~~l~~-~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  182 (510)
                      ..+.......||+++.. .++.....+.+.+...+...+++.+.+ .+.++.+...+.  +..++|+...+...+..+.+
T Consensus       101 ~~~~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e-~m~~el~~~f~~--~~~~s~~~d~l~~~~~~ii~  177 (486)
T KOG0684|consen  101 EAYSKLTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVE-LMLEELHAYFET--SLGESGETDGLYTFCRLIIF  177 (486)
T ss_pred             HHHHHhhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHHHHH-HHHHHHHHHHhc--ccccccchhHhhhhhHHHhh
Confidence            77767788889987654 567778888888888899999999885 444444443333  12236677778888888888


Q ss_pred             HHHHHhhccccCCCCCCCCCCcchHHHHHHHHHHHHH-HhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Q 035793          183 DSIFKVGFGVDLNCLDGSSGEGTEFMKAFDESNALVY-WRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRN  261 (510)
Q Consensus       183 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (510)
                      .+.-.++||......+      .+....+.++...+. ....     +.+++|....+...++.+.+.+.+...+.++++
T Consensus       178 tAs~~ll~~e~r~~~d------~~~a~l~~dLd~~F~~~d~~-----FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~  246 (486)
T KOG0684|consen  178 TASRLLLGGEVRDQLD------ADVAKLYHDLDQGFQPFDFL-----FPYNLPIPLLRRRDRARKKISKIFSKIILDRRA  246 (486)
T ss_pred             hhHHHhhhhhhhhhhc------chHHHHHHHHhccccchHhh-----cccCCCcchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence            8888888887776644      222333333332211 1111     111555566677778899999999998888877


Q ss_pred             HHHhhccCCccccHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCC
Q 035793          262 LLAMQQDSNEKEDILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGG  341 (510)
Q Consensus       262 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~  341 (510)
                      ..+     ....|++..+++ ..+++...+++|+....+..++||+.||++|.+|++++|++|||+++++++|+++++|+
T Consensus       247 s~s-----~~~~dmlq~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~  320 (486)
T KOG0684|consen  247 SIS-----KWDNDMLQSLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE  320 (486)
T ss_pred             ccc-----cccHHHHHHHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Confidence            553     245689999988 44566789999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccCC---CeeecCCCEEEEeccccccCCCC
Q 035793          342 QKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILPD---GYRVKKGDGVYYMAYAMGRMPSI  418 (510)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~---g~~ip~G~~v~~~~~~~~~d~~~  418 (510)
                      ++.         .++.+.+++||.|++||+|||||+||.+...|.+.+|.++.+   .|.||+|+.|.+++..+||||++
T Consensus       321 ~~~---------~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~pei  391 (486)
T KOG0684|consen  321 KKE---------KLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEI  391 (486)
T ss_pred             cCC---------CCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccc
Confidence            653         369999999999999999999999999999999999998854   39999999999999999999999


Q ss_pred             ccCCCCCccCCccCC-CCCC-CCCC--CcccccCCCCCcccccHHHHHHHHHHHHHHHhhhceEEEcCCC-Ccceeeeee
Q 035793          419 WGENAEEFRPERWLE-NGIF-QPES--PFKFIAFHAGPRICLGKDFAYRQMKIVSAALLRFFRFKLTDDT-RDVTYRTMF  493 (510)
Q Consensus       419 ~~~~p~~F~P~R~l~-~~~~-~~~~--~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~  493 (510)
                      | |||++|+|+||++ +++. ++..  ...++|||+|.|.|||++||.+|+|.++..+|+.||+++.+++ +++++... 
T Consensus       392 f-~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~-  469 (486)
T KOG0684|consen  392 F-PDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRM-  469 (486)
T ss_pred             c-CChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHh-
Confidence            9 9999999999994 3333 1122  2346999999999999999999999999999999999999953 45566555 


Q ss_pred             EEecCCceeEEEEecCC
Q 035793          494 TLHMDGGLHVYAISRKF  510 (510)
Q Consensus       494 ~~~~~~~~~~~~~~r~~  510 (510)
                      +..|.++++++-+.|.+
T Consensus       470 v~~P~g~v~irYK~R~~  486 (486)
T KOG0684|consen  470 VMQPEGDVRIRYKRRPL  486 (486)
T ss_pred             hcCCCCCceEEEeecCC
Confidence            88999999999998863


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.9e-58  Score=442.72  Aligned_cols=409  Identities=19%  Similarity=0.217  Sum_probs=293.5

Q ss_pred             CCCCCCCCCCCCcchHHHhhh--hhhHHHHHHHHHhhCC--cEEEecCCcce-------EEecCCcchHHhhhc----cc
Q 035793           33 KSIKDPSYPPVNGTVFHQLLY--FNRLYDYQTEVAKKQP--TFRLLGPAQSE-------IYTTDIRNIEHVLKA----KF   97 (510)
Q Consensus        33 ~~~PgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~~kyg--~~~~~~~~~~~-------vvv~~p~~ik~il~~----~~   97 (510)
                      +.|||+.|||++|+.++++..  ...+..++.+.++|||  +|+..++|.++       |++++|++++.+|.+    +.
T Consensus        17 ~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~   96 (480)
T PLN02648         17 REIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKR   96 (480)
T ss_pred             CCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcccc
Confidence            458999999999999987763  3456799999999997  78888888665       999999999999985    32


Q ss_pred             cccCCCcchhhhhhhhcc-C---ceeecCCchHHhhhhhccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeH
Q 035793           98 DKYSKGEYNQDILEDLFG-Q---GIFAVDGDKWRQQRKLASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDM  173 (510)
Q Consensus        98 ~~~~~~~~~~~~~~~~~g-~---~l~~~~~~~w~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl  173 (510)
                      +.+..  .+..... ++| .   +++..+|+.|+++|+++.+.|+ ..++.+. ..+++.++.+++.|......++++|+
T Consensus        97 ~~~~~--~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~-~~m~~~~~~~~~~w~~~~~~~~~vdv  171 (480)
T PLN02648         97 DVFTG--TYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFI-PEFRAAFAELFDTWEAELAKKGKAEF  171 (480)
T ss_pred             cccee--eeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhhhh-hHHHHHHHHHHHHHHHHHhhCCCccc
Confidence            23433  2233444 677 4   5666789999999999999999 4778877 57888999999999654334557999


Q ss_pred             HHHHHHHHHHHHHHhhccccCCCCCCCCCCcchHHHHHHHHHHHHHHhh-hcchhh-hhhhc----ccCchHHHHHHHHH
Q 035793          174 QDMLMRCTLDSIFKVGFGVDLNCLDGSSGEGTEFMKAFDESNALVYWRY-VDPFWK-LKRIS----NIGSEASLKKNIKV  247 (510)
Q Consensus       174 ~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-l~~~~----~~~~~~~~~~~~~~  247 (510)
                      .+.+++++++++++++||.+.+. +...   ..+...+........... ...++. +...+    +... ....+..+.
T Consensus       172 ~~~~~~lt~~vi~~~lfG~~~~~-~~l~---~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~  246 (480)
T PLN02648        172 NDPLDQMAFNFLCKALTGKDPSE-TALG---SDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPF-FLVKSDYDK  246 (480)
T ss_pred             cchHHHHHHHHHHHHHcCCCcch-hhhc---cchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCch-hhhhccHHH
Confidence            99999999999999999986654 1011   111111111111000000 000000 00000    0000 000000111


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCccccHHHHHHhhccCCCCCCChHHHHHHHHH-HhhccccchHHHHHHHHHHHhcChH
Q 035793          248 IDDFVHNLISTKRNLLAMQQDSNEKEDILSRFLLASEKDPDKMDDQYLRDIILN-FMIAGKDTSASTLSWFFYLLCKNPL  326 (510)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~l~~~P~  326 (510)
                      +.++++                    +.++.+++..++.  .++++++.++++. +.+++++|++++++|++++|++||+
T Consensus       247 ~~~~~~--------------------~~~~~ll~~~~~~--~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~  304 (480)
T PLN02648        247 LYDFFR--------------------ASATEALDLAEKF--GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGE  304 (480)
T ss_pred             HHHHHH--------------------HHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCH
Confidence            111111                    1223344333322  4999999998875 4567788888899999999999995


Q ss_pred             -HHHHHHHHHHhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHhhhccCCCCCCCCCcccccCcccC---CCeeecCC
Q 035793          327 -IQEKIEQEVRDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALTETLRLYPAVPSDGRCAETDDILP---DGYRVKKG  402 (510)
Q Consensus       327 -~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~---~g~~ip~G  402 (510)
                       +|+++++|++.+.+..+         ..++++++++|||+++||+|+||++|+++...|++.+|.++.   +||.||||
T Consensus       305 ~v~~klr~Ei~~~~~~~~---------~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG  375 (480)
T PLN02648        305 ELQARLAEEVRSAVKAGG---------GGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKG  375 (480)
T ss_pred             HHHHHHHHHHHHHhccCC---------CCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCC
Confidence             99999999999985211         125999999999999999999999999999999998887763   27999999


Q ss_pred             CEEEEeccccccCCCCccCCCCCccCCccCCCCCCCCCCCcccccC---------CCCCcccccHHHHHHHHHHHHHHHh
Q 035793          403 DGVYYMAYAMGRMPSIWGENAEEFRPERWLENGIFQPESPFKFIAF---------HAGPRICLGKDFAYRQMKIVSAALL  473 (510)
Q Consensus       403 ~~v~~~~~~~~~d~~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~~~~~~l~~ll  473 (510)
                      +.|+++.+.+||||++| +||++|||+||+++...   ....+++|         |.|+|.|+|++||.+|+++++++|+
T Consensus       376 ~~V~~~~~~~hrdp~~~-~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll  451 (480)
T PLN02648        376 EMLFGYQPLVTRDPKVF-DRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELF  451 (480)
T ss_pred             CEEEEChHHHhCCcccC-CCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHH
Confidence            99999999999999999 99999999999943211   12234444         6778999999999999999999999


Q ss_pred             hhce-EEEcCCCCc
Q 035793          474 RFFR-FKLTDDTRD  486 (510)
Q Consensus       474 ~~f~-~~~~~~~~~  486 (510)
                      ++|+ +++.++...
T Consensus       452 ~~f~~~~l~~~~~~  465 (480)
T PLN02648        452 LRYDSFEIEVDTSG  465 (480)
T ss_pred             HHhCEEeecCCccc
Confidence            9998 999776533


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=5.2e-54  Score=409.71  Aligned_cols=378  Identities=26%  Similarity=0.409  Sum_probs=298.3

Q ss_pred             HHHHHHHhhCCc-EEEecCCc--ceEEecCCcchHHhhhccccccCCC---cchhhhhhhhccCc-eeecCCchHHhhhh
Q 035793           59 DYQTEVAKKQPT-FRLLGPAQ--SEIYTTDIRNIEHVLKAKFDKYSKG---EYNQDILEDLFGQG-IFAVDGDKWRQQRK  131 (510)
Q Consensus        59 ~~~~~~~~kyg~-~~~~~~~~--~~vvv~~p~~ik~il~~~~~~~~~~---~~~~~~~~~~~g~~-l~~~~~~~w~~~R~  131 (510)
                      .....+.+.||. +.....+.  ..+++++++.+++++.++ ..+++.   ..........+|.+ ++..||+.|.++|+
T Consensus        26 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rk  104 (411)
T COG2124          26 FFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDP-RFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRK  104 (411)
T ss_pred             hhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCc-ccccccccccccccchhhhccccceeecCCHHHHHHHH
Confidence            444456667774 45555444  389999999999999886 222221   11111134556655 78899999999999


Q ss_pred             hccCCCCHHHHHHhhHHHHHHHHHHHHHHHhhhccCCceeeHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcchHHHHH
Q 035793          132 LASFEFSTRVLRDFSCAVFRTNAAKLVKVVSGFAVAGRVLDMQDMLMRCTLDSIFKVGFGVDLNCLDGSSGEGTEFMKAF  211 (510)
Q Consensus       132 ~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~  211 (510)
                      +++++|+++.++.+. ..+.+.++.+++.+ .  .+ +.+++.+....++.++++ .+||.+.+..       ..+....
T Consensus       105 l~~~~F~~~~~~~~~-~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-------~~~~~~~  171 (411)
T COG2124         105 LLAPAFTPRALRGYR-PLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR-------PQLLRWS  171 (411)
T ss_pred             HhccccCHHHHHHHH-HHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH-------HHHHHHH
Confidence            999999999999998 47778888888877 3  22 678899999999999999 9999877532       1222222


Q ss_pred             HHHHHHHHHhhhcchhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccHHHHHHhhccCCCCCCC
Q 035793          212 DESNALVYWRYVDPFWKLKRISNIGSEASLKKNIKVIDDFVHNLISTKRNLLAMQQDSNEKEDILSRFLLASEKDPDKMD  291 (510)
Q Consensus       212 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~  291 (510)
                      ......     ..     ....+.....+..++...+.+++..+|++++.        .+..|+++.|+.+.++++..+|
T Consensus       172 ~~~~~~-----~~-----~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~--------~~~~dlls~l~~a~~~~~~~ls  233 (411)
T COG2124         172 DALLLR-----LD-----PDLGPEEPWRRARAARRELDAYLRALIAERRA--------APRDDLLSLLLSAEDDGGGRLS  233 (411)
T ss_pred             HHHHhc-----cC-----cccCCcccHHHHHHHHHHHHHHHHHHHHHhcc--------CCcccHHHHHHHHhhCCCCcCC
Confidence            221111     00     11111223567788999999999999999982        4678999999999876655799


Q ss_pred             hHHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCCCCcchhcccCCHHHhhcChhHHHHHh
Q 035793          292 DQYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEVRDVTGGQKNETNIDDFVAKLTDETLEKMNYLHAALT  371 (510)
Q Consensus       292 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~a~i~  371 (510)
                      ++|+.++++++++||+|||+++++|+++.|++||++++++++|.+.                          ||++++|+
T Consensus       234 d~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~--------------------------~~~~~~v~  287 (411)
T COG2124         234 DDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR--------------------------PLLEAVVE  287 (411)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch--------------------------HHHHHHHH
Confidence            9999999999999999999999999999999999999999988532                          78899999


Q ss_pred             hhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCCccCCccCCCCCCCCCCCcccccCCCC
Q 035793          372 ETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEEFRPERWLENGIFQPESPFKFIAFHAG  451 (510)
Q Consensus       372 E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G  451 (510)
                      |+||++||++...|.+.+|.++ +|+.||||+.|++.++.+||||++| +||++|||+||.          ..++|||+|
T Consensus       288 E~LR~~ppv~~~~R~~~~d~~i-gg~~Ip~G~~V~~~~~~anrDp~~f-~~P~~F~p~R~~----------~~~l~FG~G  355 (411)
T COG2124         288 ETLRLYPPVPLARRVATEDVEL-GGYRIPAGTVVLLSIGAANRDPEVF-PDPDEFDPERFN----------NAHLPFGGG  355 (411)
T ss_pred             HHHHhCCchhccceeccCCEee-CCEEeCCCCEEEecHhhhcCChhhC-CChhhcCCCCCC----------CCCcCCCCC
Confidence            9999999999966666677655 8999999999999999999999999 899999999984          579999999


Q ss_pred             CcccccHHHHHHHHHHHHHHHhhhceEEEcCCCCcceeeeeeEEecCCceeEEEEec
Q 035793          452 PRICLGKDFAYRQMKIVSAALLRFFRFKLTDDTRDVTYRTMFTLHMDGGLHVYAISR  508 (510)
Q Consensus       452 ~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  508 (510)
                      +|.|+|.+||.+|++++++.++++|++....+ . .......+..+..+.++.++.|
T Consensus       356 ~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         356 PHRCLGAALARLELKVALAELLRRFPLLLLAE-P-PPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-CCccccccccCCCcceeeeecC
Confidence            99999999999999999999999999888775 2 2233444566777777777765


No 33 
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=68.49  E-value=5  Score=25.35  Aligned_cols=28  Identities=4%  Similarity=0.043  Sum_probs=17.1

Q ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 035793           13 FSLLCLLSTFSLLIIKIYSGKSIKDPSY   40 (510)
Q Consensus        13 l~~~~l~~~~~~~~~~~~~~~~~PgP~~   40 (510)
                      ++.+++|...-++.+-+.-.-+||||++
T Consensus        34 ilsV~~VG~yGFiVWM~QiifGPPGpp~   61 (62)
T COG4459          34 ILSVAFVGGYGFIVWMFQIIFGPPGPPG   61 (62)
T ss_pred             HHHHHHhcchhHHHHHHHHHhCCCCCCC
Confidence            3444555555555555555677888875


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=67.19  E-value=22  Score=22.10  Aligned_cols=43  Identities=14%  Similarity=0.088  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHhhccccchHHHHHHHHHHHhcChHHHHHHHHHH
Q 035793          293 QYLRDIILNFMIAGKDTSASTLSWFFYLLCKNPLIQEKIEQEV  335 (510)
Q Consensus       293 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~P~~~~~l~~Ei  335 (510)
                      -++...+..++-.|.|-.+..++-.+.+.--||+....+-.|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566777888888999999999999999999999998888776


No 35 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=54.14  E-value=23  Score=28.17  Aligned_cols=29  Identities=14%  Similarity=0.222  Sum_probs=19.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 035793           12 GFSLLCLLSTFSLLIIKIYSGKSIKDPSY   40 (510)
Q Consensus        12 ~l~~~~l~~~~~~~~~~~~~~~~~PgP~~   40 (510)
                      ..++.+.++.+.|++.+...+++||-|.+
T Consensus       156 ~~VlA~~VA~L~~~F~RR~~rrsppepsg  184 (215)
T PF05084_consen  156 AVVLAVSVAMLTWFFLRRTGRRSPPEPSG  184 (215)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCC
Confidence            34444555566666777777788888864


No 36 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=50.95  E-value=34  Score=23.71  Aligned_cols=27  Identities=15%  Similarity=0.434  Sum_probs=13.0

Q ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCCCC
Q 035793           13 FSLLCLLSTFSLLIIKIYSGKSIKDPS   39 (510)
Q Consensus        13 l~~~~l~~~~~~~~~~~~~~~~~PgP~   39 (510)
                      +++++++.++++++.--+++..+|.|.
T Consensus         7 ~~~~V~V~IVclliya~YRR~~i~~p~   33 (92)
T PHA02681          7 LLTVIVISIVCYIVIMMYRRSCVSAPA   33 (92)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            333555555555554444444544443


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=49.33  E-value=17  Score=23.53  Aligned_cols=25  Identities=24%  Similarity=0.381  Sum_probs=19.1

Q ss_pred             HHHHHHhcChHHHHHHHHHHHhhhC
Q 035793          316 WFFYLLCKNPLIQEKIEQEVRDVTG  340 (510)
Q Consensus       316 ~~l~~l~~~P~~~~~l~~Ei~~~~~  340 (510)
                      -.+.||.+||++.+++.+.=.+.+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            3578999999999999875544444


No 38 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=46.63  E-value=14  Score=24.17  Aligned_cols=6  Identities=83%  Similarity=1.874  Sum_probs=5.3

Q ss_pred             cCCccC
Q 035793          427 RPERWL  432 (510)
Q Consensus       427 ~P~R~l  432 (510)
                      ||||||
T Consensus        44 DPERWL   49 (59)
T PF08492_consen   44 DPERWL   49 (59)
T ss_pred             CccccC
Confidence            799998


No 39 
>PF15102 TMEM154:  TMEM154 protein family
Probab=45.36  E-value=12  Score=29.58  Aligned_cols=6  Identities=17%  Similarity=-0.180  Sum_probs=2.2

Q ss_pred             HHHHhc
Q 035793           27 IKIYSG   32 (510)
Q Consensus        27 ~~~~~~   32 (510)
                      .++++.
T Consensus        82 ~kRkr~   87 (146)
T PF15102_consen   82 YKRKRT   87 (146)
T ss_pred             Eeeccc
Confidence            333333


No 40 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=44.23  E-value=53  Score=24.67  Aligned_cols=8  Identities=25%  Similarity=0.439  Sum_probs=5.3

Q ss_pred             CCCCcchH
Q 035793           41 PPVNGTVF   48 (510)
Q Consensus        41 ~p~~G~~~   48 (510)
                      -|+.||+-
T Consensus        46 ~p~YgNL~   53 (107)
T PF15330_consen   46 DPCYGNLE   53 (107)
T ss_pred             Cccccccc
Confidence            47777754


No 41 
>PF06796 NapE:  Periplasmic nitrate reductase protein NapE;  InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=42.55  E-value=35  Score=21.96  Aligned_cols=23  Identities=0%  Similarity=-0.011  Sum_probs=11.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCC
Q 035793           16 LCLLSTFSLLIIKIYSGKSIKDP   38 (510)
Q Consensus        16 ~~l~~~~~~~~~~~~~~~~~PgP   38 (510)
                      +.+|...-++++-+.-.-+||||
T Consensus        34 v~~Vg~YGF~VWm~Q~~~GpPg~   56 (56)
T PF06796_consen   34 VAFVGGYGFIVWMYQIFFGPPGH   56 (56)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCC
Confidence            33444333333444445567775


No 42 
>PHA02902 putative IMV membrane protein; Provisional
Probab=41.21  E-value=68  Score=21.08  Aligned_cols=14  Identities=21%  Similarity=0.154  Sum_probs=7.6

Q ss_pred             HHHHHhcCCCCCCC
Q 035793           26 IIKIYSGKSIKDPS   39 (510)
Q Consensus        26 ~~~~~~~~~~PgP~   39 (510)
                      +.-+++.+.+|.|.
T Consensus        21 ya~YrR~kci~sP~   34 (70)
T PHA02902         21 YAAYKRYKCIPSPD   34 (70)
T ss_pred             HHHHHHhcCCCCCC
Confidence            34455555666654


No 43 
>PRK09458 pspB phage shock protein B; Provisional
Probab=41.09  E-value=22  Score=24.43  Aligned_cols=6  Identities=17%  Similarity=0.595  Sum_probs=2.3

Q ss_pred             Cceeee
Q 035793            1 MGIFLI    6 (510)
Q Consensus         1 ~~~~~~    6 (510)
                      |++.++
T Consensus         1 m~~~fl    6 (75)
T PRK09458          1 MSALFL    6 (75)
T ss_pred             CcchHH
Confidence            443333


No 44 
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=40.69  E-value=48  Score=23.00  Aligned_cols=23  Identities=9%  Similarity=0.086  Sum_probs=8.5

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHh
Q 035793            9 AFTGFSLLCLLSTFSLLIIKIYS   31 (510)
Q Consensus         9 ~~~~l~~~~l~~~~~~~~~~~~~   31 (510)
                      ++-+++.+++|+..+.+++...+
T Consensus         7 ~~Pliif~ifVap~wl~lHY~~k   29 (75)
T TIGR02976         7 AIPLIIFVIFVAPLWLILHYRSK   29 (75)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhh
Confidence            33333333344433333333333


No 45 
>COG3190 FliO Flagellar biogenesis protein [Cell motility and secretion]
Probab=39.53  E-value=33  Score=26.88  Aligned_cols=70  Identities=9%  Similarity=0.002  Sum_probs=39.1

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcchHHHhhhhhhHHHHHHHHHhhCCcEEEecCCcceEEecCCc
Q 035793            8 FAFTGFSLLCLLSTFSLLIIKIYSGKSIKDPSYPPVNGTVFHQLLYFNRLYDYQTEVAKKQPTFRLLGPAQSEIYTTDIR   87 (510)
Q Consensus         8 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~kyg~~~~~~~~~~~vvv~~p~   87 (510)
                      ....++.+++++++++|++.++.+.+.+-|-.++-+++... ..              .+-.++.+.+++...|+=..++
T Consensus        27 ~~gsL~~iL~lil~~~wl~kr~~~~~~~~~~~~lkil~~~~-lG--------------~resV~lV~V~~~~LVlGVt~q   91 (137)
T COG3190          27 MFGSLILILALILFLAWLVKRLGRAPLFKGSSGLKILASRS-LG--------------SRESVVLVEVGDKRLVLGVTAQ   91 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCCcccceeeecccc-cC--------------CCceEEEEEECCEEEEEEeccc
Confidence            34455666777777778888877444444445555554421 11              1123677777777655555555


Q ss_pred             chHHh
Q 035793           88 NIEHV   92 (510)
Q Consensus        88 ~ik~i   92 (510)
                      .|.-+
T Consensus        92 ~I~lL   96 (137)
T COG3190          92 QITLL   96 (137)
T ss_pred             eeEee
Confidence            55433


No 46 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=38.15  E-value=46  Score=25.64  Aligned_cols=8  Identities=13%  Similarity=0.164  Sum_probs=2.6

Q ss_pred             HHHHHHHh
Q 035793           24 LLIIKIYS   31 (510)
Q Consensus        24 ~~~~~~~~   31 (510)
                      |++++..|
T Consensus        86 y~irR~~K   93 (122)
T PF01102_consen   86 YCIRRLRK   93 (122)
T ss_dssp             HHHHHHS-
T ss_pred             HHHHHHhc
Confidence            33333333


No 47 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=36.18  E-value=44  Score=22.36  Aligned_cols=16  Identities=13%  Similarity=0.382  Sum_probs=13.0

Q ss_pred             cChhHHHHHhhhccCC
Q 035793          362 KMNYLHAALTETLRLY  377 (510)
Q Consensus       362 ~lp~l~a~i~E~lRl~  377 (510)
                      +.-+++.+|+|++|+-
T Consensus        39 r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   39 RKQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            4567899999999963


No 48 
>KOG4189 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.96  E-value=1.9e+02  Score=24.31  Aligned_cols=66  Identities=9%  Similarity=0.134  Sum_probs=43.4

Q ss_pred             cHHHHHHhhccCCCCCCChHHHHHHHHHHhhccccc--hHHHHHHHHHHHhcChHHHHHHHHHHHhhh
Q 035793          274 DILSRFLLASEKDPDKMDDQYLRDIILNFMIAGKDT--SASTLSWFFYLLCKNPLIQEKIEQEVRDVT  339 (510)
Q Consensus       274 d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~t--t~~~l~~~l~~l~~~P~~~~~l~~Ei~~~~  339 (510)
                      +|+-.++.+.....+.-+-.++...+..=.+|=+++  .-++..-++|-|-..|+.+.+|+++++++-
T Consensus       112 efV~efl~~i~as~nD~s~~diakesYd~~lakhHsW~IRtAV~~amYtLPTR~~lL~~Lk~d~~~~~  179 (209)
T KOG4189|consen  112 EFVIEFLDQIFASTNDESLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTLPTRPELLCRLKEDMDAAN  179 (209)
T ss_pred             HHHHHHHHHHHcCCCcchhhHHHHHHHHHhhhccccHHHHHHHHHHHHhCCCcHHHHHHHHhHHHHHH
Confidence            444455544322111223345555666666666665  567788899999999999999999997654


No 49 
>COG3197 FixS Uncharacterized protein, possibly involved in nitrogen fixation [Inorganic ion transport and metabolism]
Probab=31.77  E-value=78  Score=20.47  Aligned_cols=17  Identities=18%  Similarity=0.178  Sum_probs=7.8

Q ss_pred             CceeeehhhhhhhhHHH
Q 035793            1 MGIFLIIFAFTGFSLLC   17 (510)
Q Consensus         1 ~~~~~~~~~~~~l~~~~   17 (510)
                      |.++.++...++++..+
T Consensus         1 m~~l~~Lipvsi~l~~v   17 (58)
T COG3197           1 MEILYILIPVSILLGAV   17 (58)
T ss_pred             CceeeeHHHHHHHHHHH
Confidence            44455555544444433


No 50 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=31.04  E-value=23  Score=22.37  Aligned_cols=11  Identities=36%  Similarity=0.661  Sum_probs=8.9

Q ss_pred             ccCCCCCcccc
Q 035793          446 IAFHAGPRICL  456 (510)
Q Consensus       446 ~~Fg~G~r~C~  456 (510)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999874


No 51 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=30.89  E-value=14  Score=31.36  Aligned_cols=44  Identities=20%  Similarity=0.194  Sum_probs=28.5

Q ss_pred             cChhHHHHHhhhccCCCCCCCCCcc-cccCcccCCCeeecCCCEEEEe
Q 035793          362 KMNYLHAALTETLRLYPAVPSDGRC-AETDDILPDGYRVKKGDGVYYM  408 (510)
Q Consensus       362 ~lp~l~a~i~E~lRl~~~~~~~~r~-~~~~~~~~~g~~ip~G~~v~~~  408 (510)
                      .-....|||.|+.-.....  ..|. ..+|..+ +|..|||||.|...
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs--~vrlRLle~i~i-~g~~IPkgt~l~G~   95 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS--RVRLRLLEDIQI-GGILIPKGTYLYGV   95 (200)
T ss_pred             CCCeEEEEEecceEEeCCC--EEEEEEcCceEE-CCEEeCCCCEEEEE
Confidence            3455668898987664322  2343 3355444 99999999987653


No 52 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=27.10  E-value=54  Score=25.60  Aligned_cols=23  Identities=30%  Similarity=0.494  Sum_probs=16.8

Q ss_pred             cccccHHHHHHHHHHHHHHHhhh
Q 035793          453 RICLGKDFAYRQMKIVSAALLRF  475 (510)
Q Consensus       453 r~C~G~~~A~~~~~~~l~~ll~~  475 (510)
                      -.|.|+.||+..+-.++.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            37999999999999999999864


No 53 
>PF15050 SCIMP:  SCIMP protein
Probab=27.03  E-value=93  Score=23.57  Aligned_cols=25  Identities=16%  Similarity=0.158  Sum_probs=12.7

Q ss_pred             eehhhhhhhhHHHHHHHHHHHHHHH
Q 035793            5 LIIFAFTGFSLLCLLSTFSLLIIKI   29 (510)
Q Consensus         5 ~~~~~~~~l~~~~l~~~~~~~~~~~   29 (510)
                      -++++.|.+++-..+++++|...++
T Consensus         9 WiiLAVaII~vS~~lglIlyCvcR~   33 (133)
T PF15050_consen    9 WIILAVAIILVSVVLGLILYCVCRW   33 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456666555544444544544443


No 54 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=25.87  E-value=49  Score=23.50  Aligned_cols=19  Identities=11%  Similarity=0.249  Sum_probs=16.7

Q ss_pred             HHHHHHHHHhhhceEEEcC
Q 035793          464 QMKIVSAALLRFFRFKLTD  482 (510)
Q Consensus       464 ~~~~~l~~ll~~f~~~~~~  482 (510)
                      -|+-++.++|+-|||++++
T Consensus        61 ~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   61 CIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHhccCCceeee
Confidence            3678899999999999977


No 55 
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=25.82  E-value=1.6e+02  Score=17.73  Aligned_cols=35  Identities=14%  Similarity=0.054  Sum_probs=20.5

Q ss_pred             CCCcchHHHhhhhhhHHHHHHHHHhhCCcEEEecC
Q 035793           42 PVNGTVFHQLLYFNRLYDYQTEVAKKQPTFRLLGP   76 (510)
Q Consensus        42 p~~G~~~~~~~~~~~~~~~~~~~~~kyg~~~~~~~   76 (510)
                      |.+-...+-+.+.-...+.+....++||+..+.-+
T Consensus         3 Pvf~Pt~eEF~Dp~~yi~~i~~~~~~yGi~KIvPP   37 (42)
T smart00545        3 PVFYPTMEEFKDPLAYISKIRPQAEKYGICKVVPP   37 (42)
T ss_pred             CeEcCCHHHHHCHHHHHHHHHHHHhhCCEEEEECC
Confidence            33333344444443445556677889999887644


No 56 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=25.27  E-value=1.5e+02  Score=21.09  Aligned_cols=35  Identities=23%  Similarity=0.330  Sum_probs=15.7

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCc
Q 035793           10 FTGFSLLCLLSTFSLLIIKIYSGKSIKDPSYPPVNG   45 (510)
Q Consensus        10 ~~~l~~~~l~~~~~~~~~~~~~~~~~PgP~~~p~~G   45 (510)
                      +.+++++.++.++.|+..-..++|+ .-|-+-|+||
T Consensus        37 ~lvI~~iFil~VilwfvCC~kRkrs-RrPIYrPvI~   71 (94)
T PF05393_consen   37 FLVICGIFILLVILWFVCCKKRKRS-RRPIYRPVIG   71 (94)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhc-cCCccccccc
Confidence            3444444444444455433333222 2244567777


No 57 
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=23.93  E-value=2.3e+02  Score=20.62  Aligned_cols=57  Identities=12%  Similarity=0.119  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCccccHHHHHHhhccCC-CCCCChHHHHHHHHHHhhccccc
Q 035793          246 KVIDDFVHNLISTKRNLLAMQQDSNEKEDILSRFLLASEKD-PDKMDDQYLRDIILNFMIAGKDT  309 (510)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~l~~~~i~~~~~~~~~ag~~t  309 (510)
                      +.+.++++..+..-.+.       ..+++.++.+++.-+.+ .+.++-+|-...+..+..|.++-
T Consensus        27 ~Elk~Ll~~Elp~~l~~-------~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ac~~~   84 (91)
T cd05024          27 DDLQKLMEKEFSEFLKN-------QNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLIACNDY   84 (91)
T ss_pred             HHHHHHHHHHhHHHHcC-------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHH
Confidence            44555555444433321       13577999999887754 44799999988888777776553


No 58 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=23.04  E-value=1.3e+02  Score=23.40  Aligned_cols=40  Identities=13%  Similarity=0.115  Sum_probs=31.5

Q ss_pred             hHHHHHHHHHhhCCcEEEecCCcceEEecCCcchHHhhhcc
Q 035793           56 RLYDYQTEVAKKQPTFRLLGPAQSEIYTTDIRNIEHVLKAK   96 (510)
Q Consensus        56 ~~~~~~~~~~~kyg~~~~~~~~~~~vvv~~p~~ik~il~~~   96 (510)
                      .....+++|.++||-+++.- +...+...|++.++++...+
T Consensus        75 ~v~~~i~~w~~~~g~v~l~~-~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLYK-GAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEec-CeEEEEECCHHHHHHHHhCh
Confidence            45678899999999777642 46678889999999998764


No 59 
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=21.95  E-value=75  Score=17.41  Aligned_cols=15  Identities=13%  Similarity=0.000  Sum_probs=6.1

Q ss_pred             ehhhhhhhhHHHHHH
Q 035793            6 IIFAFTGFSLLCLLS   20 (510)
Q Consensus         6 ~~~~~~~l~~~~l~~   20 (510)
                      +.+.+.+++.+.+++
T Consensus         4 l~Ytfll~~tlgiiF   18 (31)
T PRK11875          4 FAYILILTLALVTLF   18 (31)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            344444444433333


No 60 
>PF12249 AftA_C:  Arabinofuranosyltransferase A C terminal;  InterPro: IPR020959 The arabinofuranosyltransferase enzyme AftA is involved in cell wall arabinan biosynthesis in bacteria []. It catalyses the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. As this enzyme is important for cell growth and is found in some important pathogens, such as Mycobacterium tuberculosis, it represents a potential target for the devlopment of new antibacterial drugs. This entry represents the C-terminal domain of AftA.; GO: 0016757 transferase activity, transferring glycosyl groups, 0044038 cell wall macromolecule biosynthetic process, 0005886 plasma membrane, 0016021 integral to membrane
Probab=21.94  E-value=37  Score=27.75  Aligned_cols=57  Identities=19%  Similarity=0.214  Sum_probs=42.9

Q ss_pred             hhccCCCCCCCCCcccccCcccCCCeeecCCCEEEEeccccccCCCCccCCCCCccCCccC
Q 035793          372 ETLRLYPAVPSDGRCAETDDILPDGYRVKKGDGVYYMAYAMGRMPSIWGENAEEFRPERWL  432 (510)
Q Consensus       372 E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~~p~~F~P~R~l  432 (510)
                      ++..|.+|-..+.|...++ .. +||++.-..-|..+...+.+..-.|  +|+.|+-.||-
T Consensus       109 d~~pWr~PdvfvfR~~~~~-~~-~~~~~~LA~DvyPn~PNVr~~~V~F--~~~~Fd~p~f~  165 (178)
T PF12249_consen  109 DSSPWRAPDVFVFRGSAED-PD-DGYTLRLAEDVYPNQPNVRRYTVTF--DPEVFDDPRFT  165 (178)
T ss_pred             HhCCCCCCCEEEEcCCCCC-CC-CCeEEeeecccCCCCCCceeeeeee--CHHHcCCCCCe
Confidence            5667888887888887643 33 6888887777888877777776666  68888777785


No 61 
>PF05545 FixQ:  Cbb3-type cytochrome oxidase component FixQ;  InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.93  E-value=87  Score=19.44  Aligned_cols=11  Identities=0%  Similarity=0.042  Sum_probs=4.3

Q ss_pred             HHHHHHHHHHH
Q 035793           16 LCLLSTFSLLI   26 (510)
Q Consensus        16 ~~l~~~~~~~~   26 (510)
                      ++++++++|.+
T Consensus        20 ~~F~gi~~w~~   30 (49)
T PF05545_consen   20 VFFIGIVIWAY   30 (49)
T ss_pred             HHHHHHHHHHH
Confidence            33344443433


Done!