BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035795
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46655|SYEC_YEAST Glutamate--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GUS1 PE=1 SV=3
Length = 708
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 82/243 (33%)
Query: 1 MSFSLRSSEYNARNAQY------------HMFNWLKIVYMPL--------WFVHNGL--- 37
++ +LR+ EY RNAQY H++++ +I ++ W V L
Sbjct: 395 VTHALRTIEYRDRNAQYDWMLQALRLRKVHIWDFARINFVRTLLSKRKLQWMVDKDLVGN 454
Query: 38 -DNPLFLALQRIIRRRLKIESLMQFILEL----YLLSLKWKTDFFIFTFS---------- 82
D+P F ++ + RR + +E L F+L +++L+W I+ F+
Sbjct: 455 WDDPRFPTVRGVRRRGMTVEGLRNFVLSQGPSRNVINLEWN---LIWAFNKKVIDPIAPR 511
Query: 83 ----------------------VRIKLRHKTCKGVGVKATTYAKTIWMDLANAELISG-- 118
+ +K +HK VG K Y K I +D +A++I+
Sbjct: 512 HTAIVNPVKIHLEGSEAPQEPKIEMKPKHKKNPAVGEKKVIYYKDIVVDKDDADVINVDE 571
Query: 119 -----------TNFRNQDGNFTGVVHLEG-YKTTVLKLTWLLEIS-----KLVGFDYLIT 161
+N DG+ ++LEG +K T KLTWL + LV FD+LIT
Sbjct: 572 EVTLMDWGNVIITKKNDDGSMVAKLNLEGDFKKTKHKLTWLADTKDVVPVDLVDFDHLIT 631
Query: 162 KKK 164
K +
Sbjct: 632 KDR 634
>sp|O13775|SYEC_SCHPO Probable glutamate--tRNA ligase, cytoplasmic OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC17A5.15c PE=1
SV=1
Length = 716
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 83/246 (33%)
Query: 1 MSFSLRSSEYNARNAQYH-MFNWLKIVYMPLW-------------------FVHNGL--- 37
++ +LR++EY RN Y M + + + +W V +GL
Sbjct: 399 VTHALRTTEYRDRNPLYQWMIKAMNLRKIHVWEFSRMNFVRTLLSKRKLTEIVDHGLVWG 458
Query: 38 -DNPLFLALQRIIRRRLKIESLMQFILEL----YLLSLKWKTDF------FIFTFSVR-- 84
D+P F ++ + RR + IE+L Q+I+ +L+L W T F I + R
Sbjct: 459 WDDPRFPTVRGVRRRGMTIEALQQYIVSQGPSKNILTLDW-TSFWATNKKIIDPVAPRHT 517
Query: 85 ----------------------IKLRHKTCKGVGVKATTYAKTIWMDLANAELIS----- 117
+ RHK +G K + +A I ++ A+A+
Sbjct: 518 AVESGDVVKATIVNGPAAPYAEDRPRHKKNPELGNKKSIFANEILIEQADAQSFKQDEEV 577
Query: 118 -----GTNF-----RNQDGNFTGV---VHLEG-YKTTVLKLTWLLEISK-----LVGFDY 158
G + R+ G T + +HL+G +K T K+TWL + LV FDY
Sbjct: 578 TLMDWGNAYVREINRDASGKVTSLKLELHLDGDFKKTEKKVTWLADTEDKTPVDLVDFDY 637
Query: 159 LITKKK 164
LITK K
Sbjct: 638 LITKDK 643
>sp|Q8CGC7|SYEP_MOUSE Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus GN=Eprs
PE=1 SV=4
Length = 1512
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 97/247 (39%), Gaps = 89/247 (36%)
Query: 1 MSFSLRSSEYNARNAQYHMFNWLKIVYMPL--------------------WFVHNGL--- 37
++ +LR++EY+ R+ Q++ + P WFV+ GL
Sbjct: 390 VTHALRTTEYHDRDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDG 449
Query: 38 -DNPLFLALQRIIRRRLKIESLMQFIL----ELYLLSLKWKTDFFIFTFSVRI------- 85
D+P F ++ ++RR + +E L QFI +++++W I+ F+ ++
Sbjct: 450 WDDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDK---IWAFNKKVIDPVAPR 506
Query: 86 -----------------------KLRHKTCKGVGVKATTYAKTIWMDLANAELISGTNF- 121
RH VG+K Y+ ++++ A+AE S
Sbjct: 507 YVALLKKEVVPVNVLDAQEEMKEVARHPKNPDVGLKPVWYSPKVFIEGADAETFSEGEMV 566
Query: 122 --------------RNQDGNFTGV---VHLEG--YKTTVLKLTWLLEISK-------LVG 155
+N DG T + ++LE YK T K+TWL E + V
Sbjct: 567 TFINWGNINITKIHKNADGKITSLDAKLNLENKDYKKTT-KITWLAESTHALSIPAVCVT 625
Query: 156 FDYLITK 162
+++LITK
Sbjct: 626 YEHLITK 632
>sp|P28668|SYEP_DROME Bifunctional glutamate/proline--tRNA ligase OS=Drosophila
melanogaster GN=Aats-glupro PE=1 SV=2
Length = 1714
Score = 38.5 bits (88), Expect = 0.019, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 24/87 (27%)
Query: 1 MSFSLRSSEYNARNAQYHMF-NWLKI------VYMPL-------------WFVHNGL--- 37
++ +LR++EY+ R+ Q++ F + LK+ Y L WFV +GL
Sbjct: 396 VTHTLRTTEYHDRDDQFYWFIDALKLRKPYIWSYSRLNMTNTVLSKRKLTWFVDSGLVDG 455
Query: 38 -DNPLFLALQRIIRRRLKIESLMQFIL 63
D+P F ++ IIRR + +E L +FI+
Sbjct: 456 WDDPRFPTVRGIIRRGMTVEGLKEFII 482
>sp|P07814|SYEP_HUMAN Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens GN=EPRS
PE=1 SV=5
Length = 1512
Score = 38.1 bits (87), Expect = 0.026, Method: Composition-based stats.
Identities = 52/247 (21%), Positives = 96/247 (38%), Gaps = 89/247 (36%)
Query: 1 MSFSLRSSEYNARNAQYHMFNWLKIVYMPL--------------------WFVHNGL--- 37
++ +LR++EY+ R+ Q++ + P WFV+ GL
Sbjct: 390 VTHALRTTEYHDRDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDG 449
Query: 38 -DNPLFLALQRIIRRRLKIESLMQFIL----ELYLLSLKWKTDFFIFTFSVRI------- 85
D+P F ++ ++RR + +E L QFI +++++W I+ F+ ++
Sbjct: 450 WDDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDK---IWAFNKKVIDPVAPR 506
Query: 86 -----------------------KLRHKTCKGVGVKATTYAKTIWMDLANAELISGTNF- 121
+H VG+K Y+ ++++ A+AE S
Sbjct: 507 YVALLKKEVIPVNVPEAQEEMKEVAKHPKNPEVGLKPVWYSPKVFIEGADAETFSEGEMV 566
Query: 122 --------------RNQDGNFTGV---VHLEG--YKTTVLKLTWLLEISK-------LVG 155
+N DG + ++LE YK T K+TWL E + V
Sbjct: 567 TFINWGNLNITKIHKNADGKIISLDAKLNLENKDYKKTT-KVTWLAETTHALPIPVICVT 625
Query: 156 FDYLITK 162
+++LITK
Sbjct: 626 YEHLITK 632
>sp|Q6JD71|TPS4B_MAIZE Inactive 7-epi-sesquithujene synthase OS=Zea mays GN=TPS4 PE=2 SV=1
Length = 460
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 51 RRLKIESLMQFILELYLLSLKWKTDFFIFTFSVRIKLRHKTCKGVGVKATTYA 103
R L ++ M+ ++ELY +KW+ D ++ T S +++ +T + + + YA
Sbjct: 367 RVLYLKQAMERLVELYSKEIKWRDDDYVPTMSEHLQVSAETIATIALTCSAYA 419
>sp|Q6JD73|TPS4A_MAIZE 7-epi-sesquithujene synthase OS=Zea mays GN=TPS4 PE=1 SV=1
Length = 554
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 51 RRLKIESLMQFILELYLLSLKWKTDFFIFTFSVRIKLRHKTCKGVGVKATTYA 103
R L ++ M+ ++ELY +KW+ D ++ T S +++ +T + + + YA
Sbjct: 367 RVLYLKQAMERLVELYSKEIKWRDDDYVPTMSEHLQVSAETIATIALTCSAYA 419
>sp|Q46A53|FOLD_METBF Bifunctional protein FolD OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=folD PE=3 SV=1
Length = 287
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 85 IKLRHKTCKGVGVKATTYAKTIWMDLANAELISGTNFRNQDGNFTGV 131
++L+H+ C+ VG++A + + + + ELIS N N+D N G+
Sbjct: 56 VRLKHRACERVGIQAEDH--FLPAETSQEELISLINTLNKDQNVHGI 100
>sp|B5YIQ8|PRMC_THEYD Release factor glutamine methyltransferase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=prmC PE=3 SV=1
Length = 279
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 10 YNARNAQYHMFNWLKIVYMPLWFVHNGLDNPLFLALQRIIRRRLKIESLMQFILELYLLS 69
+N R AQ + + LKI + L+ + + + ++ +I RRLK E L I E Y +
Sbjct: 16 FNIREAQEIICHVLKIDKIQLYTENPEITSEQAHTIKSLIERRLKKEPLQYIIGECYFYN 75
Query: 70 LKWKT 74
+K K
Sbjct: 76 IKIKV 80
>sp|Q6JD72|TPS5C_MAIZE Inactive sesquithujene synthase OS=Zea mays GN=TPS5 PE=1 SV=1
Length = 554
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 51 RRLKIESLMQFILELYLLSLKWKTDFFIFTFSVRIKLRHKTCKGVGVKATTYA 103
R L ++ M+ ++ELY +KW+ + ++ T S +K+ ++ + + YA
Sbjct: 367 RVLYLKQAMERLVELYTKEIKWRDEDYVATMSEHLKVSAESIGANALTCSAYA 419
>sp|Q0VPK5|MTNB_ALCBS Methylthioribulose-1-phosphate dehydratase OS=Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
GN=mtnB PE=3 SV=1
Length = 211
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 69 SLKWKTDFFIFTFSVRIK--LRHKTCKGVGVKATTYAKTIWMDLANAELISGTNFRNQDG 126
S + TDF T S + K LR V + + +AE + T DG
Sbjct: 39 SQRLNTDFAAVTQSGKDKGLLRETDIMAVNMDGQPASS----GKPSAETLLHTQLYRFDG 94
Query: 127 NFTGVVHLEGYKTTVLKLTWLLEISKLVGFDYL 159
N V+H + +TVL + W L G++ L
Sbjct: 95 NIQAVLHTHSHASTVLTMHWPANSITLEGYELL 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.140 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,699,222
Number of Sequences: 539616
Number of extensions: 2126532
Number of successful extensions: 4996
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4987
Number of HSP's gapped (non-prelim): 14
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)