BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035798
(313 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297849204|ref|XP_002892483.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
gi|297338325|gb|EFH68742.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/323 (71%), Positives = 261/323 (80%), Gaps = 16/323 (4%)
Query: 4 SFLQAPMAALVPSTSVHS------LRSKSTRSLKTF-------CSAKIPNPMPAHINPND 50
S LQ M +L+P +S S L S R+LKTF SAKIP P INP D
Sbjct: 3 SCLQVSMNSLLPRSSSFSPHPPLSLNSSGRRNLKTFRYAFRAKASAKIPMP---PINPKD 59
Query: 51 PFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPP 110
PFLS LA+ AA SPE +NRP N+ PYLDI+DSP LM+SPAQVERS +YNEHRP TPP
Sbjct: 60 PFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPP 119
Query: 111 PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
PDLPS+LL GRIVYIGMPLVPAVTELVVAELMYLQW+DPK PIY+YINSTGTTRDDGE+V
Sbjct: 120 PDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETV 179
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
GMESEGFAIYD+LMQ+K EVHTV VGAAIG ACLLL+AGTKG RFMMPHAK MIQQPR+P
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGNRFMMPHAKAMIQQPRVP 239
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SSGL+PASDVLIRAKE + NRD LV+LLAKHTGNS E V +RRPY+MD+ +AKEFGVI
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLAKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299
Query: 291 DKVLWRGQETIMAEVAPPEEWDK 313
DK+LWRGQE I+A+V P EE+DK
Sbjct: 300 DKILWRGQEKIIADVVPSEEFDK 322
>gi|18390982|ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|79317437|ref|NP_001031008.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|75301131|sp|Q8L770.1|CLPR3_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 3, chloroplastic; Short=ClpR3;
AltName: Full=nClpP8; Flags: Precursor
gi|22531207|gb|AAM97107.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|25083963|gb|AAN72143.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|51968388|dbj|BAD42886.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968776|dbj|BAD43080.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968816|dbj|BAD43100.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969676|dbj|BAD43530.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969856|dbj|BAD43620.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969858|dbj|BAD43621.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971032|dbj|BAD44208.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971379|dbj|BAD44354.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971381|dbj|BAD44355.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971625|dbj|BAD44477.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971739|dbj|BAD44534.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|110742786|dbj|BAE99296.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|332190276|gb|AEE28397.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|332190277|gb|AEE28398.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 330
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/323 (72%), Positives = 265/323 (82%), Gaps = 16/323 (4%)
Query: 4 SFLQAPMAALVPSTSVHS----LRSKST--RSLKTF-------CSAKIPNPMPAHINPND 50
S LQA M +L+P +S S L S S+ R+LKTF SAKIP P INP D
Sbjct: 3 SCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMP---PINPKD 59
Query: 51 PFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPP 110
PFLS LA+ AA SPE +NRP N+ PYLDI+DSP LM+SPAQVERS +YNEHRP TPP
Sbjct: 60 PFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPP 119
Query: 111 PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
PDLPS+LL GRIVYIGMPLVPAVTELVVAELMYLQW+DPK PIY+YINSTGTTRDDGE+V
Sbjct: 120 PDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETV 179
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
GMESEGFAIYD+LMQ+K EVHTV VGAAIG ACLLL+AGTKGKRFMMPHAK MIQQPR+P
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP 239
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SSGL+PASDVLIRAKE + NRD LV+LL+KHTGNS E V +RRPY+MD+ +AKEFGVI
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299
Query: 291 DKVLWRGQETIMAEVAPPEEWDK 313
D++LWRGQE I+A+V P EE+DK
Sbjct: 300 DRILWRGQEKIIADVVPSEEFDK 322
>gi|334182410|ref|NP_001184945.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|332190278|gb|AEE28399.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 370
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/323 (72%), Positives = 265/323 (82%), Gaps = 16/323 (4%)
Query: 4 SFLQAPMAALVPSTSVHS----LRSKST--RSLKTF-------CSAKIPNPMPAHINPND 50
S LQA M +L+P +S S L S S+ R+LKTF SAKIP P INP D
Sbjct: 3 SCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMP---PINPKD 59
Query: 51 PFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPP 110
PFLS LA+ AA SPE +NRP N+ PYLDI+DSP LM+SPAQVERS +YNEHRP TPP
Sbjct: 60 PFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPP 119
Query: 111 PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
PDLPS+LL GRIVYIGMPLVPAVTELVVAELMYLQW+DPK PIY+YINSTGTTRDDGE+V
Sbjct: 120 PDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETV 179
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
GMESEGFAIYD+LMQ+K EVHTV VGAAIG ACLLL+AGTKGKRFMMPHAK MIQQPR+P
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP 239
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SSGL+PASDVLIRAKE + NRD LV+LL+KHTGNS E V +RRPY+MD+ +AKEFGVI
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299
Query: 291 DKVLWRGQETIMAEVAPPEEWDK 313
D++LWRGQE I+A+V P EE+DK
Sbjct: 300 DRILWRGQEKIIADVVPSEEFDK 322
>gi|51971563|dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 330
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/323 (71%), Positives = 265/323 (82%), Gaps = 16/323 (4%)
Query: 4 SFLQAPMAALVPSTSVHS----LRSKST--RSLKTF-------CSAKIPNPMPAHINPND 50
S LQA M +L+P +S S L S S+ R+LKTF SAKIP P INP D
Sbjct: 3 SCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMP---PINPKD 59
Query: 51 PFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPP 110
PFLS LA+ AA SPE +NRP N+ PYLDI+DSP LM+SPAQVERS +YNEHRP TPP
Sbjct: 60 PFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPP 119
Query: 111 PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
PDLPS+LL GRIVYIGMPLVPAVTELVVAELMYLQW+DPK PIY+YINSTGTTRDDGE+V
Sbjct: 120 PDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETV 179
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
GMESEGFAIYD+LMQ+K EVHTV VGAAIG ACLLL+AGTKGKRFMMPHAK MIQ+PR+P
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQRPRVP 239
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SSGL+PASDVLIRAKE + NRD LV+LL+KHTGNS E V +RRPY+MD+ +AKEFGVI
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299
Query: 291 DKVLWRGQETIMAEVAPPEEWDK 313
D++LWRGQE I+A+V P EE+DK
Sbjct: 300 DRILWRGQEKIIADVVPSEEFDK 322
>gi|51970012|dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 315
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/300 (74%), Positives = 251/300 (83%), Gaps = 10/300 (3%)
Query: 21 SLRSKSTRSLKTF-------CSAKIPNPMPAHINPNDPFLSKLAAAAAASPEAFVNRPSN 73
S S R+LKTF SAKIP P INP DPFLS LA+ AA SPE +NRP N
Sbjct: 11 SSNSSGRRNLKTFRYAFRAKASAKIPMP---PINPKDPFLSTLASIAANSPEKLLNRPVN 67
Query: 74 SGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAV 133
+ PYLDI+DSP LM+SPAQVERS +YNEHRP TPPPDLPS+LL GRIVYIGMPLVPAV
Sbjct: 68 ADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAV 127
Query: 134 TELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTV 193
TELVVAELMYLQW+DPK PIY+YINSTGTTRDDGE+VGMESEGFAIYD+LMQ+K EVHTV
Sbjct: 128 TELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTV 187
Query: 194 AVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDT 253
VGAAIG ACLLL+AGTKGKRFMMPHAK MIQQPR+PSSGL+PASDVLIRAKE + NRD
Sbjct: 188 CVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDI 247
Query: 254 LVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
LV+LL+KHTGNS E V +RRPY+MD+ +AKEFGVID++LWRGQE I+A+V P EE+DK
Sbjct: 248 LVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDK 307
>gi|225450774|ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic [Vitis vinifera]
gi|296089701|emb|CBI39520.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/289 (78%), Positives = 252/289 (87%), Gaps = 3/289 (1%)
Query: 25 KSTRSLKTFCSAKIPNPMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYD 84
K+ S+K CSAKIP + INP DPFLSKLA+ AA SPE + RPS S +LP+LD++D
Sbjct: 27 KTHCSMKPTCSAKIPM---SPINPKDPFLSKLASVAATSPERLLQRPSGSDSLPFLDLFD 83
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
SP LMA+PAQVERS SYNEHRP PPPDLPSLLLHGRIVYIGMPLVPAVTELV+AELMYL
Sbjct: 84 SPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYL 143
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
QWMDPK P+Y+YIN TGTTRDDGE VGME+EGFAIYD +MQ+K E+HTVAVGAAIG ACL
Sbjct: 144 QWMDPKEPVYVYINCTGTTRDDGERVGMETEGFAIYDAMMQLKNEIHTVAVGAAIGQACL 203
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGN 264
LLAAGTKGKRFMMPHAK MIQQPR+PSSGL+PASDVLIRAKE + NRDTLVKLLAKHTGN
Sbjct: 204 LLAAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDTLVKLLAKHTGN 263
Query: 265 SEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
SEE V+ +RRPY+MDS +AKEFGVIDK+LWRGQE IMA+V PEEWDK
Sbjct: 264 SEETVSTVMRRPYYMDSTKAKEFGVIDKILWRGQEKIMADVLSPEEWDK 312
>gi|356572984|ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Glycine max]
Length = 327
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/290 (76%), Positives = 254/290 (87%), Gaps = 2/290 (0%)
Query: 25 KSTRSLKTFCSAKIPN-PMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIY 83
+ R+LKT CS P PMP +NP DPFLSKLA+ AA+SPE +N P NS TLPYLDI+
Sbjct: 29 RRCRNLKTSCSVNRPKIPMPP-LNPKDPFLSKLASVAASSPETLLNTPKNSDTLPYLDIF 87
Query: 84 DSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMY 143
DSP LMA+PAQVERS SYNEHRP PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMY
Sbjct: 88 DSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMY 147
Query: 144 LQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMAC 203
LQ+MDPK PIY+YINSTGTTRDDGE+VGME+EGFAIYD +MQ+K E+HTVAVG+AIG AC
Sbjct: 148 LQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGSAIGQAC 207
Query: 204 LLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LLL+AG+ GKRFMMPHAK MIQQPR+PSSGL+PASDVLIRAKE ++NRD LVKLLAKHTG
Sbjct: 208 LLLSAGSPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRDNLVKLLAKHTG 267
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
NSEE V ++RPY+MD+ RAKEFGVID++LWRGQE +MA+VA P++WDK
Sbjct: 268 NSEETVANVMKRPYYMDATRAKEFGVIDRILWRGQEKVMADVASPDDWDK 317
>gi|255542730|ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223548389|gb|EEF49880.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 325
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/287 (77%), Positives = 252/287 (87%), Gaps = 4/287 (1%)
Query: 28 RSLKTFCSA-KIPNPMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSP 86
R+L+ CS+ KIP P INP DPFLSKLA+ AA SP++ ++RP S T P+LD++DSP
Sbjct: 32 RNLRINCSSSKIPMP---PINPKDPFLSKLASIAANSPDSLLDRPITSDTPPFLDLFDSP 88
Query: 87 TLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQW 146
LMA+PAQVERS SYNEHRP PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQW
Sbjct: 89 KLMATPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQW 148
Query: 147 MDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLL 206
MDPK PIYLYINSTGTTRDDGE+VGME+EGFAIYD++MQ+K E+HTVAVGAAIG ACLLL
Sbjct: 149 MDPKEPIYLYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLL 208
Query: 207 AAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSE 266
AAGTKGKRFMMPHAK MIQQP++PSSGL+ ASDVLIRAKEA+ NRDTLV+LLAKHT NS
Sbjct: 209 AAGTKGKRFMMPHAKAMIQQPKVPSSGLMAASDVLIRAKEAVTNRDTLVELLAKHTENSV 268
Query: 267 EFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
E V ++RP++MDSRRAKEFGVIDK+LWRGQE IMA+V PEEWDK
Sbjct: 269 ETVANAMKRPFYMDSRRAKEFGVIDKILWRGQEKIMADVVTPEEWDK 315
>gi|224125178|ref|XP_002319519.1| predicted protein [Populus trichocarpa]
gi|118486796|gb|ABK95233.1| unknown [Populus trichocarpa]
gi|222857895|gb|EEE95442.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/315 (71%), Positives = 261/315 (82%), Gaps = 16/315 (5%)
Query: 14 VPSTSVHS----LRSKSTRSLKTFCSAKIPN---------PMPAHINPNDPFLSKLAAAA 60
+PS++++S L+ + +L+ C A I PMP INP DPFLSKLA+ A
Sbjct: 18 LPSSTLYSKSIKLKPNTIDNLRIKCFASINARNSSSSSNIPMPP-INPKDPFLSKLASIA 76
Query: 61 AASPEAFVNRP--SNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLL 118
A SP++ + S S T PYLDI++SP LMA+PAQVERS SYNEHRP TPPPDLPSLLL
Sbjct: 77 ATSPDSLLQDSPVSGSDTPPYLDIFESPKLMATPAQVERSVSYNEHRPRTPPPDLPSLLL 136
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
HGRIVYIGMPLV AVTELVVAELMYLQWMDPKAPIY+YINSTGTTRDDGESVGME+EGFA
Sbjct: 137 HGRIVYIGMPLVAAVTELVVAELMYLQWMDPKAPIYIYINSTGTTRDDGESVGMETEGFA 196
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
IYD++MQ+K E+HTVAVGAAIG ACLLLAAGTKG R+MMPHAK MIQQPR+PSSGL+PAS
Sbjct: 197 IYDSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGHRYMMPHAKAMIQQPRVPSSGLMPAS 256
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQ 298
DVLIRAKEA++NRD L +LLAKHTGNS E V ++RP++MDSRRAKEFGVIDK+LW+GQ
Sbjct: 257 DVLIRAKEAVINRDVLTELLAKHTGNSVETVANVMKRPFYMDSRRAKEFGVIDKILWQGQ 316
Query: 299 ETIMAEVAPPEEWDK 313
E IMA+V PPE+WDK
Sbjct: 317 EKIMADVLPPEDWDK 331
>gi|363807834|ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycine max]
gi|255635968|gb|ACU18330.1| unknown [Glycine max]
Length = 324
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/316 (70%), Positives = 264/316 (83%), Gaps = 7/316 (2%)
Query: 1 MSTSFLQAPMAALVPSTSVHSLRSKSTRSLKTFCS---AKIPNPMPAHINPNDPFLSKLA 57
M ++L+ P + + S + R+K R+LKT CS AKIP P +NP DPFLSKLA
Sbjct: 3 MMAAYLRVPTSTPITPQSPTATRTKC-RNLKTSCSVNAAKIPMP---PLNPKDPFLSKLA 58
Query: 58 AAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLL 117
+ AA+SP+ +N P NS T P+LDI+DSP LMA+PAQVERS SYNEHRP PPPDLPSLL
Sbjct: 59 SIAASSPDTLLNTPKNSDTPPFLDIFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLL 118
Query: 118 LHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGF 177
LHGRIVYIGMPLVPAVTELVVAELM LQ+MDPK I++YINSTGTTRDDGE+VGME+EGF
Sbjct: 119 LHGRIVYIGMPLVPAVTELVVAELMCLQYMDPKETIFIYINSTGTTRDDGETVGMETEGF 178
Query: 178 AIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPA 237
AIYD +MQ+K E+HTVAVG+AIG ACLLL+AGT GKRFMMPHAK MIQQPR+PSSGL+PA
Sbjct: 179 AIYDAMMQLKNEIHTVAVGSAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPA 238
Query: 238 SDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRG 297
SDVLIRAKE ++NRD LVKLLAKHTGNSEE V ++RPY+MD+ RAKEFGVID++LWRG
Sbjct: 239 SDVLIRAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRILWRG 298
Query: 298 QETIMAEVAPPEEWDK 313
+E +MA+VA P++WDK
Sbjct: 299 REKVMADVASPDDWDK 314
>gi|449454073|ref|XP_004144780.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Cucumis sativus]
gi|449490882|ref|XP_004158737.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Cucumis sativus]
Length = 331
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/315 (69%), Positives = 254/315 (80%), Gaps = 7/315 (2%)
Query: 3 TSFLQAPMAALVPSTSVHSLRSKSTRS---LKTFCSAKIPNPMPAHINPNDPFLSKLAAA 59
T LQ PMA PS+S R+ + R+ L +AK+P P INP DPFLSKLA+
Sbjct: 10 TVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLP---PINPKDPFLSKLASV 66
Query: 60 AAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLH 119
A+ SPE +NRP+NS + PYLDI+D+P LMA+PAQVERS SYNEHR PPPDLPSLLLH
Sbjct: 67 ASTSPETLLNRPANSESPPYLDIFDAPRLMAAPAQVERSISYNEHRSRRPPPDLPSLLLH 126
Query: 120 GRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAI 179
GRIVYIGMPLVPAVTELV+A++MYLQWMDPK P+YLYINSTGTTRDDGE V MESEGFAI
Sbjct: 127 GRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAI 186
Query: 180 YDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASD 239
YD LMQ K E+HTV VGAA+G ACLLLAAGTKG+R+ MPHAK MIQQP +PS GL+PASD
Sbjct: 187 YDALMQSKNEIHTVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASD 246
Query: 240 VLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIR-RPYHMDSRRAKEFGVIDKVLWRGQ 298
V+IRAKE + NRDTLVKLLAKHT NS E V ++ PY+MDS +AKEFGVIDK+LWRGQ
Sbjct: 247 VIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKILWRGQ 306
Query: 299 ETIMAEVAPPEEWDK 313
E IMA++A PE+WDK
Sbjct: 307 EKIMADMASPEDWDK 321
>gi|357511831|ref|XP_003626204.1| ATP-dependent Clp protease proteolytic subunit-related protein
[Medicago truncatula]
gi|217074128|gb|ACJ85424.1| unknown [Medicago truncatula]
gi|355501219|gb|AES82422.1| ATP-dependent Clp protease proteolytic subunit-related protein
[Medicago truncatula]
Length = 322
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/309 (66%), Positives = 244/309 (78%), Gaps = 10/309 (3%)
Query: 1 MSTSF---LQAPMAALVPSTSVHSLRSKSTRSLKTFCSAKIPNPMPAHINPNDPFLSKLA 57
M+T F + P + ST R ++ R++ +KIP NPNDPFLSKLA
Sbjct: 1 MATCFRVPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIP------FNPNDPFLSKLA 54
Query: 58 AAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHR-PDTPPPDLPSL 116
+ A +SPE N S+ LP+LDI+DSP LMA+PAQ+ERSASY++ R P PPPDLPSL
Sbjct: 55 SVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQLERSASYSQQRRPKRPPPDLPSL 114
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
LL+GRIVYIGMPLVPAVTELV+AELM+LQWM PK PIY+YINSTGTTR DGE+V MESEG
Sbjct: 115 LLNGRIVYIGMPLVPAVTELVIAELMFLQWMAPKEPIYIYINSTGTTRADGETVAMESEG 174
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
FAIYD +MQMK E++TVA+GAA+G ACLLL+AGTKG+R+M PHAK MIQQPR+PSSGL P
Sbjct: 175 FAIYDAMMQMKTEINTVALGAAVGQACLLLSAGTKGRRYMTPHAKAMIQQPRVPSSGLRP 234
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
ASDVLI AKE MVNRDTLVKLLAKHT NSEE V+ ++R Y+MD+ AKEFGVIDK+LWR
Sbjct: 235 ASDVLIHAKEVMVNRDTLVKLLAKHTENSEETVSNVMKRSYYMDALLAKEFGVIDKILWR 294
Query: 297 GQETIMAEV 305
GQE IMA+V
Sbjct: 295 GQEKIMADV 303
>gi|388518383|gb|AFK47253.1| unknown [Medicago truncatula]
Length = 322
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/309 (66%), Positives = 243/309 (78%), Gaps = 10/309 (3%)
Query: 1 MSTSF---LQAPMAALVPSTSVHSLRSKSTRSLKTFCSAKIPNPMPAHINPNDPFLSKLA 57
M+T F + P + ST R ++ R++ +KIP NPNDPFLSKLA
Sbjct: 1 MATCFRVPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIP------FNPNDPFLSKLA 54
Query: 58 AAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHR-PDTPPPDLPSL 116
+ A +SPE N S+ LP+LDI+DSP LMA+PAQ+ERSASY++ R P PPPDLPSL
Sbjct: 55 SVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQLERSASYSQQRRPKRPPPDLPSL 114
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
LL+GRIVYIG PLVPAVTELV+AELM+LQWM PK PIY+YINSTGTTR DGE+V MESEG
Sbjct: 115 LLNGRIVYIGTPLVPAVTELVIAELMFLQWMAPKEPIYIYINSTGTTRADGETVAMESEG 174
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
FAIYD +MQMK E++TVA+GAA+G ACLLL+AGTKG+R+M PHAK MIQQPR+PSSGL P
Sbjct: 175 FAIYDAMMQMKTEINTVALGAAVGQACLLLSAGTKGRRYMTPHAKAMIQQPRVPSSGLRP 234
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
ASDVLI AKE MVNRDTLVKLLAKHT NSEE V+ ++R Y+MD+ AKEFGVIDK+LWR
Sbjct: 235 ASDVLIHAKEVMVNRDTLVKLLAKHTENSEETVSNVMKRSYYMDALLAKEFGVIDKILWR 294
Query: 297 GQETIMAEV 305
GQE IMA+V
Sbjct: 295 GQEKIMADV 303
>gi|226505068|ref|NP_001149025.1| LOC100282645 [Zea mays]
gi|195624074|gb|ACG33867.1| ATP-dependent Clp protease proteolytic subunit-like [Zea mays]
gi|414866760|tpg|DAA45317.1| TPA: ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea
mays]
gi|414866761|tpg|DAA45318.1| TPA: ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea
mays]
Length = 339
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/274 (67%), Positives = 220/274 (80%), Gaps = 9/274 (3%)
Query: 46 INP-NDPFLSKLAAAAAASPE----AFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSAS 100
NP DPFLS LAAA SPE A LP+L+I+ + LMASPAQVERS+S
Sbjct: 59 FNPRGDPFLSTLAAA---SPEDLAAAAGGERRGEDHLPFLEIFQNTKLMASPAQVERSSS 115
Query: 101 -YNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINS 159
Y++HRP PPPDLPSLLLHGRIVYIGMPLVPAVTEL+VA+LMYL+WM+ K P+Y+YINS
Sbjct: 116 SYSQHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELIVAQLMYLEWMNSKEPVYIYINS 175
Query: 160 TGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPH 219
TGT RDDGE VGMESEGFAIYD +M+MK E+HT+ +GAA G ACL+LAAG KGKR+M PH
Sbjct: 176 TGTARDDGEPVGMESEGFAIYDAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPH 235
Query: 220 AKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHM 279
AK MIQQPR+PS G++ ASDV+IRAKE + NR+TLVKLLA+HTGN E + K +R P++M
Sbjct: 236 AKAMIQQPRIPSYGMMQASDVVIRAKEVVHNRNTLVKLLARHTGNPPEKIDKVMRGPFYM 295
Query: 280 DSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
DS +AKEFGVIDK+LWRGQE MA++ P+EWDK
Sbjct: 296 DSLKAKEFGVIDKILWRGQEKYMADMLSPDEWDK 329
>gi|242035789|ref|XP_002465289.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
gi|241919143|gb|EER92287.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
Length = 339
Score = 346 bits (887), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 184/274 (67%), Positives = 219/274 (79%), Gaps = 9/274 (3%)
Query: 46 INP-NDPFLSKLAAAAAASPE----AFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSAS 100
NP DPFLS LAAA SPE A LP+L+I+ + LMASPAQVERS+S
Sbjct: 59 FNPRGDPFLSTLAAA---SPEDLAAAAGGERRGEDHLPFLEIFQNAKLMASPAQVERSSS 115
Query: 101 -YNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINS 159
Y++HRP PPPDLPSLLLHGRIVYIGMPLVPAVTELVVA+LMYL+WM+ K P+Y+YINS
Sbjct: 116 SYSQHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINS 175
Query: 160 TGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPH 219
TGT RDDGE VGMESEGFAIYD +M+M E+HT+ +GAA G ACL+LAAG KGKR+M PH
Sbjct: 176 TGTARDDGEPVGMESEGFAIYDAMMRMNTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPH 235
Query: 220 AKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHM 279
AK MIQQPR+PS G++ ASDV+IRAKE + NR+TLVKLLA+HTGN E + K +R P++M
Sbjct: 236 AKAMIQQPRIPSYGMMQASDVVIRAKEVVHNRNTLVKLLARHTGNPPEKIDKVMRGPFYM 295
Query: 280 DSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
DS +AKEFGVIDK+LWRGQE MA++ P+EWDK
Sbjct: 296 DSLKAKEFGVIDKILWRGQEKYMADMLSPDEWDK 329
>gi|168025572|ref|XP_001765308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683627|gb|EDQ70036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 298
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/269 (66%), Positives = 214/269 (79%), Gaps = 3/269 (1%)
Query: 47 NPNDPFLSKLAAAAAA--SPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEH 104
+PNDPFL+KLAAAA+ S+S P LDI +P +MA+PAQVER++ YNEH
Sbjct: 10 SPNDPFLAKLAAAASTEMGKAQLAGARSDSDGPPLLDILTNPVMMAAPAQVERTSGYNEH 69
Query: 105 RPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTR 164
RP PPPDLPSLLLH RIVYIGMPLVPAVTELV+AEL+YLQ+ DP+ PIY+YINSTGT+R
Sbjct: 70 RPRRPPPDLPSLLLHSRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGTSR 129
Query: 165 DDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMI 224
DGE+VG+E+EGFAIYDTLM ++ ++ TVAVGAAIG ACLLLA+G KG R+MMPHA MI
Sbjct: 130 ADGETVGLETEGFAIYDTLMNVRNQIQTVAVGAAIGQACLLLASGDKGMRYMMPHATAMI 189
Query: 225 QQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRA 284
QQPRLPS+G + A DV IRAKE + NRDTLV LLAKHTGN E V K ++RP++M+ ++A
Sbjct: 190 QQPRLPSTGQMSAIDVHIRAKELINNRDTLVGLLAKHTGNPYEKVAKVMQRPFYMNPKKA 249
Query: 285 KEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
EFGV DK+LWRGQE MAE E+WDK
Sbjct: 250 VEFGVADKILWRGQEA-MAETMKTEDWDK 277
>gi|108708097|gb|ABF95892.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|218192812|gb|EEC75239.1| hypothetical protein OsI_11536 [Oryza sativa Indica Group]
gi|222624913|gb|EEE59045.1| hypothetical protein OsJ_10812 [Oryza sativa Japonica Group]
Length = 341
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/289 (64%), Positives = 222/289 (76%), Gaps = 17/289 (5%)
Query: 34 CSAKIPNPMPAHINPN-DPFLSKLAAAAAASPEAF-----VNRPSNSGTLPYLDIYDSPT 87
S PNP+ NP DPFLS LAAA SPE LP+L+I+ +
Sbjct: 51 ASGGSPNPL---FNPRADPFLSTLAAA---SPEELQAAAAGGGRRGDDHLPFLEIFQNAK 104
Query: 88 LMASPAQVERSAS-YNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQW 146
LMASPAQVERS+S Y++HRP PPPDLPSLLLHGRIVYIGMPLVPAVTELVVA+LMYL+W
Sbjct: 105 LMASPAQVERSSSSYSQHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAQLMYLEW 164
Query: 147 MDPKAPIYLYIN--STGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
M+ K P+Y+YIN GT RDDGE VGMESEGFAIYD +M+MK E+HT+ +GAA G ACL
Sbjct: 165 MNSKEPVYIYINST--GTARDDGEPVGMESEGFAIYDAMMRMKTEIHTLCIGAAAGHACL 222
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGN 264
+LAAG KGKR+M PHAK MIQQPR+PS G++ ASDV+IRAKE + NR+TLV+LLA+HTGN
Sbjct: 223 VLAAGKKGKRYMFPHAKAMIQQPRIPSYGMMQASDVVIRAKEVVHNRNTLVRLLARHTGN 282
Query: 265 SEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
E + K +R P++MDS +AKEFGVIDK+LWRGQE MA++ PEEWDK
Sbjct: 283 PPEKIDKVMRGPFYMDSLKAKEFGVIDKILWRGQEKYMADMLSPEEWDK 331
>gi|224284163|gb|ACN39818.1| unknown [Picea sitchensis]
Length = 327
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 217/275 (78%), Gaps = 9/275 (3%)
Query: 41 PMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYD--SPTLMASPAQVERS 98
P+P NPNDPFLS LA A+ S +P + T P LD+ +P LMA PAQVER
Sbjct: 39 PLPPR-NPNDPFLSNLAFTASGSQA----KPRSDDTPPLLDLVANITPRLMAGPAQVER- 92
Query: 99 ASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYIN 158
ASYNEHRP PPPDLPSLLL+ RI++IGMPLVPAVTELV+AE +YLQW+DP+ P Y+YIN
Sbjct: 93 ASYNEHRPRRPPPDLPSLLLNSRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYIN 152
Query: 159 STGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMP 218
STGT+R+DGE+V +E+EGFAIYDT+MQMK E+HTVA GAA+G ACLLLAAG KGKR+M+P
Sbjct: 153 STGTSREDGETVALETEGFAIYDTMMQMKNEIHTVAFGAAVGQACLLLAAGKKGKRYMLP 212
Query: 219 HAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYH 278
HA++++QQPRLP++G +PA DV IRAKE + NRDT VKLLAKHTGN E V K + RP++
Sbjct: 213 HAQVLLQQPRLPATGQMPAIDVHIRAKELIHNRDTFVKLLAKHTGNPFETVAKAMERPFY 272
Query: 279 MDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
M R+A EFGV DK+LW+GQE I + P+EWDK
Sbjct: 273 MFPRQAVEFGVADKILWQGQEAI-GDTPSPDEWDK 306
>gi|168013355|ref|XP_001759365.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689295|gb|EDQ75667.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 210/269 (78%), Gaps = 3/269 (1%)
Query: 47 NPNDPFLSKLAAAAAA--SPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEH 104
+PNDPFL+KLAAAA+ S P LDI +P +MA+PAQVERS+ YNEH
Sbjct: 8 SPNDPFLAKLAAAASTEMGKAQLAGASGVSDGPPLLDILSNPVMMAAPAQVERSSGYNEH 67
Query: 105 RPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTR 164
RP PPPDLPSLLL+ RIVYIGMPLVPAVTELV+AEL+YLQ+ DP+ PIY+YINSTGT R
Sbjct: 68 RPRRPPPDLPSLLLNSRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGTAR 127
Query: 165 DDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMI 224
DGE+VG+E+EGFAIYDTLM ++ ++ TVAVGAAIG ACLLLA+G KG R+MMPHA MI
Sbjct: 128 ADGETVGLETEGFAIYDTLMNVRNQIQTVAVGAAIGQACLLLASGDKGMRYMMPHATAMI 187
Query: 225 QQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRA 284
QQPRLPS+G + A DV IRAKE + NRDTLV LLAKHTGN E V K + RP++M+ ++A
Sbjct: 188 QQPRLPSTGQMSAIDVHIRAKELINNRDTLVGLLAKHTGNPVEKVAKVMERPFYMNPKKA 247
Query: 285 KEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
+FGV DK+LWRGQE MAE E+WDK
Sbjct: 248 VDFGVADKILWRGQEA-MAETMKAEDWDK 275
>gi|326494016|dbj|BAJ85470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495362|dbj|BAJ85777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511045|dbj|BAJ91870.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/285 (62%), Positives = 217/285 (76%), Gaps = 12/285 (4%)
Query: 35 SAKIPNPMPAHINP-NDPFLSKLAAAAAASPEAFV----NRPSNSGTLPYLDIYDSPTLM 89
+A P+P+ NP DPFLS LAAA SPE LP+L+I+ + LM
Sbjct: 49 AAGAPSPL---FNPRGDPFLSTLAAA---SPEQLAAAAGGERRGEDHLPFLEIFQNAKLM 102
Query: 90 ASPAQVERSASYNEHR-PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
+SPAQVERS+S P PPPDLPSLLLHGRIVYIGMPLVPAVTEL+VA+LMYL WM+
Sbjct: 103 SSPAQVERSSSSYSQHSPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELIVAQLMYLDWMN 162
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P Y+YINSTGT RDDGE VGME+EGFAIYD +M+MK EVHT+ +GAA G ACL+LAA
Sbjct: 163 SSEPAYIYINSTGTARDDGEPVGMETEGFAIYDAMMRMKTEVHTLCIGAAAGHACLVLAA 222
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
G KGKR+M PHAK +IQQPR+PS G++ ASDV+IRAKE + NR+TLVKLLA+HTGN E
Sbjct: 223 GKKGKRYMFPHAKALIQQPRIPSYGMMQASDVVIRAKEVVHNRNTLVKLLARHTGNPPEK 282
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
+ K +R P++MDS +AKEFGVIDK+LWRGQE M+++ PE+WDK
Sbjct: 283 IDKVMRGPFYMDSLKAKEFGVIDKILWRGQEKYMSDMLSPEDWDK 327
>gi|357112271|ref|XP_003557933.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Brachypodium distachyon]
Length = 338
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 179/285 (62%), Positives = 216/285 (75%), Gaps = 12/285 (4%)
Query: 35 SAKIPNPMPAHINP-NDPFLSKLAAAAAASPEAFV----NRPSNSGTLPYLDIYDSPTLM 89
+A P+P+ NP DPFLS LAAA SPE LP+L+I+ + LM
Sbjct: 50 AAGAPSPL---FNPRGDPFLSTLAAA---SPEELAAAAGGEHRGDDHLPFLEIFQNAKLM 103
Query: 90 ASPAQVERSASYNEHR-PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
+SPAQVERS+S P PPPDLPSLLLHGRIVYIGMPLVPAVTEL+VA+LMYL W +
Sbjct: 104 SSPAQVERSSSSYSQHSPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELIVAQLMYLDWTN 163
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P Y+YINSTGT RDDGE VGME+EGFAIYD +M+MK E+HT+ +GAA G ACL+LAA
Sbjct: 164 SSEPAYIYINSTGTARDDGEPVGMETEGFAIYDAMMRMKTEIHTLCIGAAAGHACLVLAA 223
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
G KGKR+M PHAK +IQQPR+PS G++ ASDV+IRAKE + NR+TLVKLLA+HTGN E
Sbjct: 224 GKKGKRYMFPHAKALIQQPRIPSYGMMQASDVVIRAKEVVHNRNTLVKLLARHTGNPPEK 283
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
+ K +R P++MDS +AKEFGVIDK+LWRGQE MA++ PEEWDK
Sbjct: 284 IDKVMRGPFYMDSLKAKEFGVIDKILWRGQEKYMADMLSPEEWDK 328
>gi|224284192|gb|ACN39832.1| unknown [Picea sitchensis]
Length = 327
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/275 (64%), Positives = 216/275 (78%), Gaps = 9/275 (3%)
Query: 41 PMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYD--SPTLMASPAQVERS 98
P+P NPNDPFLS LA A+ S +P + T P LD+ +P LMA AQVER
Sbjct: 39 PLPPR-NPNDPFLSNLAFTASGSQA----KPRSDDTPPLLDLVANITPRLMAGHAQVER- 92
Query: 99 ASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYIN 158
ASYNEHRP PPPDLPSLLL+ RI++IGMPLVPAVTELV+AE +YLQW+DP+ P Y+YIN
Sbjct: 93 ASYNEHRPRRPPPDLPSLLLNSRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYIN 152
Query: 159 STGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMP 218
STGT+R+DGE+V +E+EGFAIYDT+MQMK E+HTVA GAA+G ACLLLAAG KGKR+M+P
Sbjct: 153 STGTSREDGETVALETEGFAIYDTMMQMKNEMHTVAFGAAVGQACLLLAAGKKGKRYMLP 212
Query: 219 HAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYH 278
HA++++QQPRLP++G +PA DV IRAKE + NRDT VKLLAKHTGN E V K + RP++
Sbjct: 213 HAQVLLQQPRLPATGQMPAIDVHIRAKELIHNRDTFVKLLAKHTGNPFETVAKAMERPFY 272
Query: 279 MDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
M R+A EFGV DK+LW+GQE I + P+EWDK
Sbjct: 273 MFPRQAVEFGVADKILWQGQEAI-GDTPSPDEWDK 306
>gi|115452971|ref|NP_001050086.1| Os03g0344900 [Oryza sativa Japonica Group]
gi|113548557|dbj|BAF12000.1| Os03g0344900 [Oryza sativa Japonica Group]
Length = 349
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 186/297 (62%), Positives = 222/297 (74%), Gaps = 25/297 (8%)
Query: 34 CSAKIPNPMPAHINPN-DPFLSKLAAAAAASPEAF-----VNRPSNSGTLPYLDIYDSPT 87
S PNP+ NP DPFLS LAAA SPE LP+L+I+ +
Sbjct: 51 ASGGSPNPL---FNPRADPFLSTLAAA---SPEELQAAAAGGGRRGDDHLPFLEIFQNAK 104
Query: 88 LMASPAQVERSAS-YNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQW 146
LMASPAQVERS+S Y++HRP PPPDLPSLLLHGRIVYIGMPLVPAVTELVVA+LMYL+W
Sbjct: 105 LMASPAQVERSSSSYSQHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAQLMYLEW 164
Query: 147 MDPKAPIYLYIN--STGTTRDDGESVGMESEGFAIYDTLMQMKCE---VHTVAVGAAIGM 201
M+ K P+Y+YIN GT RDDGE VGMESEGFAIYD +M+MK E +HT+ +GAA G
Sbjct: 165 MNSKEPVYIYINST--GTARDDGEPVGMESEGFAIYDAMMRMKTEKIRIHTLCIGAAAGH 222
Query: 202 ACLLLAAGTKGKRFMMPHAK-----IMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVK 256
ACL+LAAG KGKR+M PHAK MIQQPR+PS G++ ASDV+IRAKE + NR+TLV+
Sbjct: 223 ACLVLAAGKKGKRYMFPHAKDSIMPAMIQQPRIPSYGMMQASDVVIRAKEVVHNRNTLVR 282
Query: 257 LLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
LLA+HTGN E + K +R P++MDS +AKEFGVIDK+LWRGQE MA++ PEEWDK
Sbjct: 283 LLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKILWRGQEKYMADMLSPEEWDK 339
>gi|2342674|gb|AAB70396.1| Similar to ATP-dependent Clp protease (gb|D90915). EST gb|N65461
comes from this gene [Arabidopsis thaliana]
Length = 292
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/312 (58%), Positives = 211/312 (67%), Gaps = 51/312 (16%)
Query: 4 SFLQAPMAALVPSTSVHS----LRSKST--RSLKTF-------CSAKIPNPMPAHINPND 50
S LQA M +L+P +S S L S S+ R+LKTF SAKIP P INP D
Sbjct: 3 SCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMP---PINPKD 59
Query: 51 PFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPP 110
PFLS LA+ AA SPE +NRP N+ PYLDI+DSP LM+SPAQVERS +YNEHRP TPP
Sbjct: 60 PFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPP 119
Query: 111 PDLPSLLLHGRIVYIGMP---------LVPAVTELVVAELMYLQWMDPKAPIYLYINSTG 161
PDLPS+LL GRIVYIGMP LVPAVTELVVAELMYLQW+DPK PIY+YINSTG
Sbjct: 120 PDLPSMLLDGRIVYIGMPTDDDIFCFQLVPAVTELVVAELMYLQWLDPKEPIYIYINSTG 179
Query: 162 TTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAK 221
TTRDDGE+ VHTV VGAAIG ACLLL+AGTKGKRFMMPHAK
Sbjct: 180 TTRDDGET--------------------VHTVCVGAAIGQACLLLSAGTKGKRFMMPHAK 219
Query: 222 IMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDS 281
++ L + + + + NRD LV+LL+KHTGNS E V +RRPY+MD+
Sbjct: 220 --GEESEFDYFIFL----IPVMQLQVITNRDILVELLSKHTGNSVETVANVMRRPYYMDA 273
Query: 282 RRAKEFGVIDKV 293
+AKEFGVID+V
Sbjct: 274 PKAKEFGVIDRV 285
>gi|302795281|ref|XP_002979404.1| hypothetical protein SELMODRAFT_153292 [Selaginella moellendorffii]
gi|300153172|gb|EFJ19812.1| hypothetical protein SELMODRAFT_153292 [Selaginella moellendorffii]
Length = 243
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/225 (69%), Positives = 187/225 (83%), Gaps = 3/225 (1%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
MA+PA VE SYNEHRP PPPDLPSLLL+ RIVY+GMPLVPAVTELV+AEL+YLQ+ D
Sbjct: 1 MAAPAHVE--TSYNEHRPRKPPPDLPSLLLNSRIVYVGMPLVPAVTELVIAELLYLQYSD 58
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P PIY+YINSTGT+R DGE+VGME+EGFAI+DT+ +K E+HTV VGAAIG ACLLLAA
Sbjct: 59 PTLPIYMYINSTGTSRADGETVGMETEGFAIHDTMQLVKNEIHTVGVGAAIGQACLLLAA 118
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKGKR+M+PHA MIQQPR+PS G +PA D+ +RAKE + NRDTLV+LLA+HTGN E
Sbjct: 119 GTKGKRYMLPHATAMIQQPRMPSMGQMPAIDLHLRAKEVIHNRDTLVELLAEHTGNPVEK 178
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
V K +RRPY+M ++A +FGV+DK+LWRGQE M E PE+WDK
Sbjct: 179 VAKVMRRPYYMSPKKAMDFGVVDKILWRGQEA-MGETLSPEQWDK 222
>gi|302817400|ref|XP_002990376.1| hypothetical protein SELMODRAFT_131372 [Selaginella moellendorffii]
gi|302825342|ref|XP_002994294.1| hypothetical protein SELMODRAFT_138455 [Selaginella moellendorffii]
gi|300137825|gb|EFJ04638.1| hypothetical protein SELMODRAFT_138455 [Selaginella moellendorffii]
gi|300141938|gb|EFJ08645.1| hypothetical protein SELMODRAFT_131372 [Selaginella moellendorffii]
Length = 235
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/214 (70%), Positives = 180/214 (84%), Gaps = 1/214 (0%)
Query: 100 SYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINS 159
SYNEHRP PPPDLPSLLL+ RIVY+GMPLVPAVTELV+AEL+YLQ+ DP PIY+YINS
Sbjct: 2 SYNEHRPRKPPPDLPSLLLNSRIVYVGMPLVPAVTELVIAELLYLQYSDPTLPIYMYINS 61
Query: 160 TGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPH 219
TGT+R DGE+VGME+EGFAI+DT+ +K E+HTV VGAAIG ACLLLAAGTKGKR+M+PH
Sbjct: 62 TGTSRADGETVGMETEGFAIHDTMQLVKNEIHTVGVGAAIGQACLLLAAGTKGKRYMLPH 121
Query: 220 AKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHM 279
A MIQQPR+PS G +PA D+ +RAKE + NRDTLV+LLA+HTGN E V K +RRPY+M
Sbjct: 122 ATAMIQQPRMPSMGQMPAIDLHLRAKEVIHNRDTLVELLAEHTGNPVEKVAKVMRRPYYM 181
Query: 280 DSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
++A +FGV+DK+LWRGQE M E PE+WDK
Sbjct: 182 SPKKAMDFGVVDKILWRGQEA-MGETLSPEQWDK 214
>gi|414866759|tpg|DAA45316.1| TPA: hypothetical protein ZEAMMB73_084178 [Zea mays]
Length = 182
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 118/172 (68%), Positives = 145/172 (84%)
Query: 142 MYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGM 201
MYL+WM+ K P+Y+YINSTGT RDDGE VGMESEGFAIYD +M+MK E+HT+ +GAA G
Sbjct: 1 MYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFAIYDAMMRMKTEIHTLCIGAAAGH 60
Query: 202 ACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKH 261
ACL+LAAG KGKR+M PHAK MIQQPR+PS G++ ASDV+IRAKE + NR+TLVKLLA+H
Sbjct: 61 ACLVLAAGKKGKRYMFPHAKAMIQQPRIPSYGMMQASDVVIRAKEVVHNRNTLVKLLARH 120
Query: 262 TGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
TGN E + K +R P++MDS +AKEFGVIDK+LWRGQE MA++ P+EWDK
Sbjct: 121 TGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKILWRGQEKYMADMLSPDEWDK 172
>gi|308800244|ref|XP_003074903.1| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
gi|119358826|emb|CAL52171.2| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
Length = 297
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/228 (53%), Positives = 160/228 (70%), Gaps = 1/228 (0%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
SP SPA SYNEH+P TPPPDLPSLLL RIVYIGMPLVPAVTEL+V+EL+YL
Sbjct: 61 SPIASTSPASANPGTSYNEHKPKTPPPDLPSLLLDSRIVYIGMPLVPAVTELIVSELLYL 120
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
Q+ D K P Y+YINSTG TR DGE VG E+E AIYDT+ + E++TV G A+G AC+
Sbjct: 121 QYADQKKPCYIYINSTGCTRADGEVVGFETEATAIYDTMKYIGNEIYTVGTGVAVGQACV 180
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGN 264
LL+AG KGKRFM PHA M+ QPR+PS+G A+++ I+ E + + TL+ +L+K TG+
Sbjct: 181 LLSAGDKGKRFMTPHATAMLHQPRVPSTGERQATELNIKWHETLAQKKTLLNVLSKTTGH 240
Query: 265 SEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWD 312
S E + K +RRP +M + A ++GV DK++ R + I A+V WD
Sbjct: 241 SVEKLDKDMRRPLYMTAADAIQYGVADKIVTRDSKAI-ADVLSASAWD 287
>gi|412990287|emb|CCO19605.1| ATP-dependent Clp protease-like protein [Bathycoccus prasinos]
Length = 296
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 161/224 (71%), Gaps = 1/224 (0%)
Query: 90 ASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDP 149
ASPA SY+EHRP TPPPDLPSLLL RIVYIGMPLVPAVTEL+V+EL+Y+Q+ DP
Sbjct: 67 ASPASANPGTSYDEHRPKTPPPDLPSLLLDSRIVYIGMPLVPAVTELIVSELLYMQYTDP 126
Query: 150 KAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAG 209
YLYINSTG TR DGE VG E+E AIYDT+ + EV+TV G AIG AC+LL+AG
Sbjct: 127 GKACYLYINSTGCTRADGEVVGFETEATAIYDTMKYIGNEVYTVGTGVAIGQACVLLSAG 186
Query: 210 TKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFV 269
KGKRFM PHA M+ QP++PS+G +++ I+ KE + + +++K+LA+ TG + E +
Sbjct: 187 QKGKRFMTPHATAMLHQPKVPSTGQQQTTELQIKWKEVLDQKKSMLKILAETTGQTAEKI 246
Query: 270 TKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
K I+RP ++ ++ A E+G++DK++ + + I EV E WDK
Sbjct: 247 DKDIQRPLYLTAQAAIEYGLVDKIVDKSAKAI-DEVLNTESWDK 289
>gi|145343690|ref|XP_001416446.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576671|gb|ABO94739.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 308
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 164/232 (70%), Gaps = 1/232 (0%)
Query: 81 DIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAE 140
+ Y SP SPA SY+EH+P TPPPDLPSLLL RIVYIGMPLVPAVTEL+V+E
Sbjct: 68 NAYASPQASNSPASANPGTSYSEHKPKTPPPDLPSLLLDSRIVYIGMPLVPAVTELIVSE 127
Query: 141 LMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIG 200
L+YLQ+ D K P Y+YINSTG TR DGE VG E+E AI+DT+ + E++TV G AIG
Sbjct: 128 LLYLQYTDQKKPCYIYINSTGCTRADGEVVGFETEATAIFDTMKYIGNEIYTVGTGVAIG 187
Query: 201 MACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAK 260
AC+LL+AG KGKR+M PHA M+ QPR+PS+G A+++ I+ +E + + +L+ +L++
Sbjct: 188 QACMLLSAGDKGKRYMTPHATAMLHQPRVPSTGERQATELNIKWRETLAQKKSLLDILSQ 247
Query: 261 HTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWD 312
TG+S + K ++RP +M ++ A E+G++DKV+ R + +A+V WD
Sbjct: 248 TTGHSVAKLDKDMQRPLYMTAKDAIEYGIVDKVIER-ESNAIADVMSASAWD 298
>gi|384251987|gb|EIE25464.1| hypothetical protein COCSUDRAFT_52875 [Coccomyxa subellipsoidea
C-169]
Length = 221
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 145/193 (75%), Gaps = 1/193 (0%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI Y+GMPLVPAVTEL++AEL+YLQ+ D PIYLYINSTGTTR DGE+VG E+EG AIY
Sbjct: 23 RITYLGMPLVPAVTELIIAELLYLQYKDRTKPIYLYINSTGTTRADGETVGFETEGTAIY 82
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K EVHTV VG A+G AC+LL+AG KGKRFM+PHA M+QQPR+P +G A ++
Sbjct: 83 DTMQFVKNEVHTVGVGVAMGQACMLLSAGHKGKRFMLPHATAMLQQPRVPPTGQRQAIEI 142
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQET 300
I+ +E + + L+++L+K TG+SEE + K ++RP +M A E+G+ID ++ R Q
Sbjct: 143 QIKWREVLAQKQALLRILSKTTGHSEEKLDKDMQRPLYMQPPDAIEYGIIDGIV-RPQTD 201
Query: 301 IMAEVAPPEEWDK 313
I+ +V ++WDK
Sbjct: 202 IIDDVMNADQWDK 214
>gi|428305262|ref|YP_007142087.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
gi|428246797|gb|AFZ12577.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
Length = 219
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M P Q +S Y ++ TPPPDLPS+LL RIVY+GMPLVP+VTEL+VAEL+YLQ+ D
Sbjct: 1 MNIPIQAVQSPYYGDNFYRTPPPDLPSMLLKERIVYLGMPLVPSVTELIVAELLYLQYED 60
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P+ PI +YINSTGT+ +GE +G E+E FAI DT+ +K +HT+ +G+A+GMA +LL+A
Sbjct: 61 PEKPIKIYINSTGTSNYNGEPIGFETEAFAICDTMSYIKPPIHTICIGSAMGMAAMLLSA 120
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKG R +P+A I++ QP+ + G A+D+ IRAKE + N+ TL+++L+K+TGN+ E
Sbjct: 121 GTKGCRVSLPNANIVLHQPKAYARG--QATDIQIRAKEVLANKATLLEILSKNTGNAPEK 178
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETI 301
+ K + R +M AKE+G+ID+VL E +
Sbjct: 179 IAKDMDRMLYMTPFEAKEYGLIDQVLESTAEAL 211
>gi|428217036|ref|YP_007101501.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena sp.
PCC 7367]
gi|427988818|gb|AFY69073.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena sp.
PCC 7367]
Length = 218
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 148/204 (72%), Gaps = 3/204 (1%)
Query: 91 SPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPK 150
SP V+ + Y + +PPPDL SLLL RIVYIGMPLV +VTEL+VAEL+YLQ+ D +
Sbjct: 4 SPNAVQ-AGYYGDAAFRSPPPDLQSLLLKERIVYIGMPLVASVTELIVAELLYLQYEDTE 62
Query: 151 APIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGT 210
PIY+YINSTGT R DGE VG E+E FAI DTL +K VHT+ +G A G A +LL++GT
Sbjct: 63 KPIYIYINSTGTDRGDGEPVGFETEAFAICDTLKYIKPPVHTICIGTAAGSAAMLLSSGT 122
Query: 211 KGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVT 270
KG R +P+A I+++QP+ + G A+D+ IRAKE + NRDT++++LAK+TG E ++
Sbjct: 123 KGCRASLPNANIVLRQPKSYARG--QATDIQIRAKEVLANRDTVLEMLAKNTGQPREKIS 180
Query: 271 KTIRRPYHMDSRRAKEFGVIDKVL 294
K + R +M + AKE+G+ID+VL
Sbjct: 181 KDMDRLLYMSAYDAKEYGLIDRVL 204
>gi|255070315|ref|XP_002507239.1| predicted protein [Micromonas sp. RCC299]
gi|226522514|gb|ACO68497.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 203
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 148/203 (72%)
Query: 92 PAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKA 151
PA ASY+EH+P TPPPDLPSLLL RI+YIGMPLVPAVTEL+V+EL+Y+Q+ DP
Sbjct: 1 PASANPGASYSEHKPKTPPPDLPSLLLDSRIIYIGMPLVPAVTELIVSELLYMQYTDPAR 60
Query: 152 PIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTK 211
P Y+YINSTG R DGE VG E+E +IYDT+ + E+ TV G AIG AC+LL+AG K
Sbjct: 61 PCYIYINSTGCQRADGEVVGFETEATSIYDTMKYIGNEIFTVGTGVAIGQACMLLSAGDK 120
Query: 212 GKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTK 271
GKRFM +A M+ QPR+PS+G A ++ I+ KE + + T+V +L++ TG+S+E + K
Sbjct: 121 GKRFMTKNATAMLHQPRVPSTGQRQAIELHIKWKEVLEQKKTMVDILSQTTGHSKEQIDK 180
Query: 272 TIRRPYHMDSRRAKEFGVIDKVL 294
I+RP +M + A +G+IDK++
Sbjct: 181 DIQRPMYMTAEDAIAYGIIDKIV 203
>gi|119512062|ref|ZP_01631156.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
gi|119463288|gb|EAW44231.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
Length = 220
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 140/189 (74%), Gaps = 2/189 (1%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDG 167
TPPPDLPSLL+ RIVY+GMPLVPAVTEL++AEL+YLQ DP+ PI +YINSTGT+ G
Sbjct: 21 TPPPDLPSLLMKERIVYLGMPLVPAVTELIIAELLYLQSDDPEKPIKIYINSTGTSGYSG 80
Query: 168 ESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQP 227
E +G E+E FAIYDT+ +K +HT+ +G+A+GMA +LL+AGTKG R +PH+ I++ QP
Sbjct: 81 EPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPHSSIILHQP 140
Query: 228 RLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEF 287
+ + G A+D+ IRA+E ++N+ +LV +L TG + E +TK + R +M A+++
Sbjct: 141 KSYAQG--QATDIQIRAREVLINKASLVDILGHTTGQAPEKITKDMDRLLYMTPYEARDY 198
Query: 288 GVIDKVLWR 296
G+ID+V +
Sbjct: 199 GLIDRVFEK 207
>gi|428299970|ref|YP_007138276.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
6303]
gi|428236514|gb|AFZ02304.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
6303]
Length = 220
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 148/208 (71%), Gaps = 2/208 (0%)
Query: 91 SPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPK 150
SP + ++A E+ TPPPDL SLLL RIVY+G+PLVPAVTEL+VA+L+YLQ DP+
Sbjct: 4 SPIKAVQAAYSGENSYRTPPPDLESLLLKERIVYLGLPLVPAVTELIVAQLLYLQSDDPE 63
Query: 151 APIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGT 210
PI +YINSTGT+ G+ VG E+E FAIYDT+ +K +HT+ +G+A+GMA +LLAAGT
Sbjct: 64 KPIKIYINSTGTSGYTGDPVGFETEAFAIYDTMKYIKPPIHTICMGSAMGMAAMLLAAGT 123
Query: 211 KGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVT 270
KG R +P+A I++ QP+ + G A+D+ IRAKE + N+ T++ + +++TG ++E +
Sbjct: 124 KGCRASLPNASIVLHQPKSYAQG--QATDIQIRAKEVLANKATMLDIFSRNTGQTKEKIE 181
Query: 271 KTIRRPYHMDSRRAKEFGVIDKVLWRGQ 298
K + R +++ A +G+ID+V + +
Sbjct: 182 KDMDRLFYITPHDAVAYGLIDRVFEKNE 209
>gi|428221048|ref|YP_007105218.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
gi|427994388|gb|AFY73083.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
Length = 215
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 135/174 (77%), Gaps = 2/174 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVYIG+PLV AVTEL+ AEL+YLQ+ DP PIY+YINSTGT R+DGE VG E+E FAI
Sbjct: 30 RIVYIGLPLVAAVTELITAELLYLQYEDPDKPIYIYINSTGTGREDGEPVGYETEAFAIA 89
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ +G AIG A +LL++GTKG R +P+A I+++QP+ + G A+D+
Sbjct: 90 DTMRYIKPPIHTICIGTAIGAAAMLLSSGTKGLRASLPNASIVLRQPKSYARG--QATDI 147
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
IRAKE M NRDT++ +L+++TG ++E ++K + R ++M ++ AK++G+IDKVL
Sbjct: 148 EIRAKEVMANRDTMIDVLSRNTGQTKEKLSKDMDRLFYMTAQEAKDYGLIDKVL 201
>gi|307108088|gb|EFN56329.1| hypothetical protein CHLNCDRAFT_144777 [Chlorella variabilis]
Length = 315
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 182/305 (59%), Gaps = 20/305 (6%)
Query: 26 STRSLKTFCSAKIPNPMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDS 85
S+ + T ++ P A ++ + AA+ + R T P + D
Sbjct: 7 SSCRVATLVGSRRHGPYRAARQQRQHIVAAVHGTPAAADVGDLQRFQQLWTPPAAQLVD- 65
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
A +++Y++H+P TPPPDLPSLLL RIVY+GMPLVPAVTEL++AE++YLQ
Sbjct: 66 -VQARGGAPAAAASAYDDHKPRTPPPDLPSLLLDSRIVYLGMPLVPAVTELIIAEMLYLQ 124
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
+ D P+YLYINSTGTTR DGE+VG E+EG AIYDT+ +K EVHTV VG AIG +C+L
Sbjct: 125 YKDRTKPMYLYINSTGTTRADGETVGFETEGTAIYDTMCFVKNEVHTVGVGVAIGQSCML 184
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L+AG KGKRFM+ HA M+ QPR+P +G A ++ I+ +E + + ++ +L++ TG+S
Sbjct: 185 LSAGEKGKRFMLEHATAMLHQPRVPPTGQRQAIEIQIKWREVLAQKQNMLAILSRTTGHS 244
Query: 266 EEFVTKT-----------------IRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPP 308
+ + K ++RP +M A +GVID V+ ++ I+ +V
Sbjct: 245 PDKLDKASAAGGGWWPGLALGAGDMQRPLYMQPADALAYGVIDGVV-TPEKKIIDDVKSA 303
Query: 309 EEWDK 313
++WDK
Sbjct: 304 DQWDK 308
>gi|218439261|ref|YP_002377590.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7424]
gi|218171989|gb|ACK70722.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 228
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 148/221 (66%), Gaps = 12/221 (5%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVV 138
M+S + ++A Y + TPPPDL SLLL RIVY+GMPL + VT+L++
Sbjct: 1 MSSQIKAVQTAYYGDANFRTPPPDLESLLLKERIVYLGMPLFSSDEIKQQVGIDVTQLII 60
Query: 139 AELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAA 198
A+L+YLQ+ DP PIY YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A
Sbjct: 61 AQLLYLQFDDPDKPIYFYINSTGTSWYTGDAIGFETEAFAICDTINYIKPPVHTICIGQA 120
Query: 199 IGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 258
+G A ++L+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++
Sbjct: 121 MGTAAMILSAGTKGCRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVLANKRTMLEIF 178
Query: 259 AKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
AK+TG + E + K + R ++M +AKE+G+ID+VL +E
Sbjct: 179 AKNTGQTVEKLAKDLDRTFYMTPEQAKEYGLIDRVLESRKE 219
>gi|428224314|ref|YP_007108411.1| endopeptidase Clp [Geitlerinema sp. PCC 7407]
gi|427984215|gb|AFY65359.1| Endopeptidase Clp [Geitlerinema sp. PCC 7407]
Length = 237
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 151/206 (73%), Gaps = 2/206 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M SP Q +S Y + TPPPDLPSLLL RIVY+GMPLVPAVTEL++AEL+YLQ+ D
Sbjct: 19 MKSPIQAVQSPYYGDGFHRTPPPDLPSLLLKERIVYLGMPLVPAVTELIIAELLYLQYED 78
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P+ PI +YINSTGT+ GE VG E+E FAI DT+ +K +HT+ +G+A+GMA +LL+A
Sbjct: 79 PEKPIRIYINSTGTSSYSGEPVGFETEAFAICDTISYIKPPIHTICIGSAMGMAAMLLSA 138
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKG R +PHA I++ QP+ + G A+D+ IRAKE + N++T+V +L+++TG + E
Sbjct: 139 GTKGCRASLPHASIVLHQPKSYARG--QATDIQIRAKEVLANKETMVSILSRNTGQAPEK 196
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVL 294
+ K + R +M + AKE+G+ID+VL
Sbjct: 197 IIKDMDRLLYMTPQEAKEYGLIDRVL 222
>gi|323455402|gb|EGB11270.1| hypothetical protein AURANDRAFT_21676 [Aureococcus anophagefferens]
Length = 221
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 129/204 (63%), Gaps = 2/204 (0%)
Query: 109 PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
PPPDL SLLLH RIVY+GMP+V AVTEL+VAEL+YL + P P+ LYINS GT G+
Sbjct: 18 PPPDLASLLLHNRIVYLGMPMVSAVTELIVAELLYLNYESPTKPVTLYINSPGTVNSQGQ 77
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPR 228
SVG E+E FAI D + +K V T+ VG A G A +LLA G KGKRF +P+A IM+ QPR
Sbjct: 78 SVGFETEAFAIADCMKYIKPPVQTICVGQAFGAAAMLLAQGEKGKRFCLPNASIMLHQPR 137
Query: 229 LPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
+ G ASD+ IRA+E M NR +L+A+ G S + V R ++ A E+G
Sbjct: 138 SQARG--QASDIAIRAREVMSNRKVSCELMARACGRSVDEVMADASRTKYLQPDEAVEYG 195
Query: 289 VIDKVLWRGQETIMAEVAPPEEWD 312
+IDKVL + A VA P D
Sbjct: 196 LIDKVLHNVGKDAAAAVAKPSFMD 219
>gi|254409400|ref|ZP_05023181.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
gi|196183397|gb|EDX78380.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
Length = 223
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 149/206 (72%), Gaps = 2/206 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M P Q +S Y TPPPDLPSLLL+ RIVY+G+PLVP VTEL+VAEL+YLQ+ +
Sbjct: 6 MKQPIQAVQSTYYGRQNYRTPPPDLPSLLLNERIVYLGLPLVPQVTELIVAELLYLQYDN 65
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P PI +YINSTGT+R DGE +G E+E FAI DT+ ++ +HT+ +G+A+GMA +LL+A
Sbjct: 66 PDKPIKIYINSTGTSRYDGEPIGFETEAFAICDTMNYIQPPIHTICIGSAMGMAAMLLSA 125
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKG R +P+A I++ QP+ + G A+D+ IRAKE + N+ T++ +LAK+TG S E
Sbjct: 126 GTKGCRASLPNASIVLHQPKSYARG--QATDIQIRAKEVLANKITMMGILAKNTGQSAEK 183
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVL 294
+TK + R +M AKE+G+ID+VL
Sbjct: 184 ITKDMERMLYMTPYEAKEYGLIDRVL 209
>gi|168049469|ref|XP_001777185.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671413|gb|EDQ57965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 131/187 (70%), Gaps = 3/187 (1%)
Query: 109 PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
PPPDLPS L RIV++ M LVPAVTELV+AEL+YLQ+ DP+ IY+YINSTGTT+ DGE
Sbjct: 35 PPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYLQYDDPEKSIYMYINSTGTTK-DGE 93
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPR 228
+G E+E FAIYDT+ +K + T+ VG A G A LLLAAG+KG R +P A IM++QP
Sbjct: 94 KLGYETEAFAIYDTMRYVKPPIFTLCVGNAWGEAALLLAAGSKGNRACLPSATIMLKQPI 153
Query: 229 LPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
G A+D+ I KE ++ LVKLL++HTG S E +T IRRP + A ++G
Sbjct: 154 AQFRG--QATDIDIARKEVRNVKEELVKLLSRHTGQSPEKITDDIRRPKYFKPDEAVDYG 211
Query: 289 VIDKVLW 295
+IDKVL+
Sbjct: 212 IIDKVLY 218
>gi|425436519|ref|ZP_18816954.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9432]
gi|425450003|ref|ZP_18829835.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 7941]
gi|440752717|ref|ZP_20931920.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|389678720|emb|CCH92423.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9432]
gi|389769364|emb|CCI05783.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 7941]
gi|440177210|gb|ELP56483.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
Length = 228
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 149/221 (67%), Gaps = 12/221 (5%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVV 138
M S + ++A Y + TPPPDL SLLL RIVY+G+PL + VTEL++
Sbjct: 1 MNSVIKAVQTAYYGDAAYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNIGVDVTELII 60
Query: 139 AELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAA 198
A+L+YLQ+ DP+ PI+ YINSTGT+ G+++G E+E FAI DTL +K VHT+ +G A
Sbjct: 61 AQLLYLQFDDPEKPIFFYINSTGTSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQA 120
Query: 199 IGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 258
+G A ++L+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++
Sbjct: 121 MGTAAMILSAGTKGFRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVIANKQTMLEIF 178
Query: 259 AKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
+K+TG + E + K + R +++ ++AK++G+ID+VL +E
Sbjct: 179 SKNTGQTTEKLAKDMDRTFYLTPQQAKDYGLIDRVLESRKE 219
>gi|166368460|ref|YP_001660733.1| ATP-dependent Clp protease-like protein [Microcystis aeruginosa
NIES-843]
gi|390438072|ref|ZP_10226570.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis sp. T1-4]
gi|422301332|ref|ZP_16388700.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9806]
gi|425442639|ref|ZP_18822880.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9717]
gi|425447771|ref|ZP_18827753.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9443]
gi|425455949|ref|ZP_18835660.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9807]
gi|425462516|ref|ZP_18841990.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9808]
gi|425465072|ref|ZP_18844382.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9809]
gi|443664108|ref|ZP_21133358.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
gi|159028169|emb|CAO89776.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166090833|dbj|BAG05541.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|389716258|emb|CCH99491.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9717]
gi|389731600|emb|CCI04365.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9443]
gi|389792300|emb|CCI11971.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9806]
gi|389803099|emb|CCI17965.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9807]
gi|389824417|emb|CCI26623.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9808]
gi|389832762|emb|CCI23366.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9809]
gi|389838472|emb|CCI30694.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis sp. T1-4]
gi|443331651|gb|ELS46297.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
Length = 228
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 149/221 (67%), Gaps = 12/221 (5%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVV 138
M S + ++A Y + TPPPDL SLLL RIVY+G+PL + VTEL++
Sbjct: 1 MNSVIKAVQTAYYGDAAYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNVGVDVTELII 60
Query: 139 AELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAA 198
A+L+YLQ+ DP+ PI+ YINSTGT+ G+++G E+E FAI DTL +K VHT+ +G A
Sbjct: 61 AQLLYLQFDDPEKPIFFYINSTGTSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQA 120
Query: 199 IGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 258
+G A ++L+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++
Sbjct: 121 MGTAAMILSAGTKGFRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVIANKQTMLEIF 178
Query: 259 AKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
+K+TG + E + K + R +++ ++AK++G+ID+VL +E
Sbjct: 179 SKNTGQTTEKLAKDMDRTFYLTPQQAKDYGLIDRVLESRKE 219
>gi|119493581|ref|ZP_01624245.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452571|gb|EAW33754.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 220
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 142/213 (66%), Gaps = 12/213 (5%)
Query: 97 RSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQW 146
+S YN+ TPPPDL SLLL RIVY+G+PL + VTEL++A+L+YLQ+
Sbjct: 2 QSPYYNDSPVRTPPPDLESLLLKERIVYLGLPLYSSDDIKRQVGIDVTELIIAQLLYLQF 61
Query: 147 MDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLL 206
DP PIY YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A+G A ++L
Sbjct: 62 DDPDKPIYFYINSTGTSWYGGDAIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAMIL 121
Query: 207 AAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSE 266
+AGTKG R +PHA +++ Q + S G A+D+ IRAKE + N+ T ++++AK+TG S
Sbjct: 122 SAGTKGYRASLPHATLILNQAKSGSRG--QATDIQIRAKEVLANKQTFLEIMAKNTGQST 179
Query: 267 EFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
E + K R +++ AKE+G+ID+VL +E
Sbjct: 180 ERIAKDTDRMFYLTPEAAKEYGLIDRVLQSRKE 212
>gi|284929272|ref|YP_003421794.1| protease subunit of ATP-dependent protease [cyanobacterium UCYN-A]
gi|284809716|gb|ADB95413.1| protease subunit of ATP-dependent protease [cyanobacterium UCYN-A]
Length = 226
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 146/213 (68%), Gaps = 12/213 (5%)
Query: 97 RSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQW 146
+SA Y + TPPPDL SLLL RI+Y+G+PL + VT+L++A+L+YLQ+
Sbjct: 7 QSAYYGDANFRTPPPDLESLLLKERIIYLGLPLFSSDEVKQQVGIDVTQLIIAQLLYLQF 66
Query: 147 MDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLL 206
+P PI+ YINSTGT+ G++VG E+E FAI DT+ +K +HT+ +G A+G A ++L
Sbjct: 67 DNPDKPIFFYINSTGTSWHTGDAVGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMIL 126
Query: 207 AAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSE 266
+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++L+K+TG +
Sbjct: 127 SAGTKGCRASLPHATIVLNQNRSGAQG--QATDIQIRAKEVLSNKSTMLQILSKNTGQAV 184
Query: 267 EFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
+ ++K I R +++ +AKE+G+ID+VL +E
Sbjct: 185 DKISKDIDRTFYLTPEKAKEYGLIDRVLESTKE 217
>gi|428313412|ref|YP_007124389.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255024|gb|AFZ20983.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 231
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 151/206 (73%), Gaps = 2/206 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M P Q +S Y TPPPDLPSLLL+ RIVY+GMPLVPAVT+L++AEL++LQ+ D
Sbjct: 14 MNLPIQAVQSPYYGNTSYRTPPPDLPSLLLNERIVYLGMPLVPAVTQLIIAELLFLQYQD 73
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P PI +Y+NSTGT+R DGE +G E+E FAI DT+ +K +HT+ +G+A+GMA +LL+A
Sbjct: 74 PDKPIKIYVNSTGTSRYDGEPIGFETEAFAICDTMSYIKPPIHTICLGSAMGMAAMLLSA 133
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKG R +P+A I++ QP+ + G A+D+ IRAKE + N+ T++ +L+++TG E
Sbjct: 134 GTKGCRASLPNASIVLHQPKSYTRG--QATDIQIRAKEVLANKATMIDILSRNTGQPSEK 191
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVL 294
+ K + R ++M ++AKE+G+ID+VL
Sbjct: 192 IAKDMDRLFYMTPQQAKEYGLIDRVL 217
>gi|16331161|ref|NP_441889.1| ATP-dependent Clp protease-like-protein [Synechocystis sp. PCC
6803]
gi|383322903|ref|YP_005383756.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326072|ref|YP_005386925.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383491956|ref|YP_005409632.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437224|ref|YP_005651948.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451815317|ref|YP_007451769.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|18202351|sp|P74466.1|CLPR_SYNY3 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|1653655|dbj|BAA18567.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339274256|dbj|BAK50743.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359272222|dbj|BAL29741.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275392|dbj|BAL32910.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278562|dbj|BAL36079.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961462|dbj|BAM54702.1| ATP-dependent Clp protease-like-protein [Bacillus subtilis
BEST7613]
gi|451781286|gb|AGF52255.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 225
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 143/208 (68%), Gaps = 12/208 (5%)
Query: 97 RSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQW 146
+S+ Y + TPPPDL SLLL RIVY+GMPL + VT+L++A+L+YLQ+
Sbjct: 7 QSSYYGDMAFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQF 66
Query: 147 MDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLL 206
DP PIY YINSTGT+ G++VG E+E FAI DTL +K VHT+ +G A+G A ++L
Sbjct: 67 DDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMIL 126
Query: 207 AAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSE 266
++GTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++L+ +TG ++
Sbjct: 127 SSGTKGYRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVISNKQTMLEILSLNTGQTQ 184
Query: 267 EFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E + K + R +++ +AKE+G+ID+VL
Sbjct: 185 EKLAKDMDRTFYLTPAQAKEYGLIDRVL 212
>gi|428202894|ref|YP_007081483.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
gi|427980326|gb|AFY77926.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
Length = 228
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 149/221 (67%), Gaps = 12/221 (5%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVV 138
M S + ++A Y++ TPPPDL SLLL RIVY+GMPL + VT+L++
Sbjct: 1 MTSQIKAVQTAYYSDVSYRTPPPDLESLLLKERIVYLGMPLFSSDDVKQQVGIDVTQLII 60
Query: 139 AELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAA 198
A+L++LQ+ D + PIY YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A
Sbjct: 61 AQLLFLQFDDAEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTIAYIKPPVHTICIGQA 120
Query: 199 IGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 258
+G A ++L+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++L
Sbjct: 121 MGTAAMILSAGTKGCRASLPHATIVLNQSRTGAQG--QATDIQIRAKEVISNKRTMLEIL 178
Query: 259 AKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
+K+TG E + K + R ++M ++AKE+G+ID+VL +E
Sbjct: 179 SKNTGQPIEKIAKDMDRTFYMTPQQAKEYGLIDRVLESRKE 219
>gi|168007320|ref|XP_001756356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692395|gb|EDQ78752.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 131/187 (70%), Gaps = 3/187 (1%)
Query: 109 PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
PPPDLPS L RIV++ M LVPAVTELV+AEL+YLQ+ DP+ IY+YINSTGTT+ DGE
Sbjct: 39 PPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYLQYDDPEKSIYMYINSTGTTK-DGE 97
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPR 228
+G E+E FAIYDT+ +K + T+ VG A G A LLLAAG+KG R +P A IM++QP
Sbjct: 98 KLGYETEAFAIYDTMRYVKPPIFTLCVGNAWGEAALLLAAGSKGNRACLPSATIMLKQPI 157
Query: 229 LPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
G A+D+ I KE ++ LVKL+++HTG + E +T IRRP + A ++G
Sbjct: 158 AQFRG--QATDIDIARKEVRNVKEELVKLISRHTGQTVEKITDDIRRPKYFKPDEAVDYG 215
Query: 289 VIDKVLW 295
+IDKVL+
Sbjct: 216 LIDKVLY 222
>gi|427707094|ref|YP_007049471.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7107]
gi|427359599|gb|AFY42321.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7107]
Length = 220
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 134/176 (76%), Gaps = 2/176 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL+VA+L+YLQ DP+ PI +YINSTGT+ GE VG E+E FAI+
Sbjct: 34 RIVYLGMPLVPAVTELIVAQLLYLQSDDPEKPIKIYINSTGTSGYSGEPVGFETEAFAIF 93
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ +G+A+GMA +LL+AGTKG R +P+A I++ QP+ + G A+D+
Sbjct: 94 DTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPNASIILHQPKSYAQG--QATDI 151
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
IRAKE + N+ +LV++L + TG + E +TK + R ++M++ +AKE+G+ID+V +
Sbjct: 152 QIRAKEVLANKASLVEILTRTTGQTGEKITKDMDRLFYMNAYQAKEYGLIDRVFEK 207
>gi|22299302|ref|NP_682549.1| ATP-dependent Clp protease-like protein [Thermosynechococcus
elongatus BP-1]
gi|22295485|dbj|BAC09311.1| ATP-dependent Clp protease proteolytic subunit 3
[Thermosynechococcus elongatus BP-1]
Length = 218
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 131/174 (75%), Gaps = 2/174 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL++AEL+YLQ+ DP+ PI +YINSTGT+R DGE VG E+E FAI
Sbjct: 33 RIVYLGMPLVPAVTELIIAELLYLQYDDPEKPIRIYINSTGTSRYDGEPVGFETEAFAIC 92
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K VHT+ +G A+GMA +LL+AGTKG R +PHA I++ Q + + G A+D+
Sbjct: 93 DTMRYIKPPVHTICIGQAMGMAAMLLSAGTKGCRASLPHATIVLHQTKSYAQG--QATDI 150
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
IRAKE + N+ +V++LA++TG E +T+ + R +M + AKE+G+ID++L
Sbjct: 151 QIRAKEVLANKAMMVEILAQNTGQPPERITRDMDRLLYMTPQMAKEYGIIDRIL 204
>gi|425470395|ref|ZP_18849265.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9701]
gi|389883996|emb|CCI35667.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9701]
Length = 228
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 148/221 (66%), Gaps = 12/221 (5%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVV 138
M S + ++A Y + TPPPDL SLLL RIVY+G+PL + VTEL++
Sbjct: 1 MNSVIKAVQTAYYGDAAYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNVGVDVTELII 60
Query: 139 AELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAA 198
A+L+YLQ+ DP+ PI+ YINSTGT+ G+++G E+E FAI DTL +K VHT+ +G A
Sbjct: 61 AQLLYLQFDDPEKPIFFYINSTGTSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQA 120
Query: 199 IGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 258
+G A ++L+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++
Sbjct: 121 MGTAAMILSAGTKGFRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVIANKQTMLEIF 178
Query: 259 AKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
+K+TG + E + K + R +++ ++AK++G+ID VL +E
Sbjct: 179 SKNTGQTTEKLAKDMDRTFYLTPQQAKDYGLIDLVLESRKE 219
>gi|332706286|ref|ZP_08426353.1| protease subunit of ATP-dependent Clp protease [Moorea producens
3L]
gi|332354934|gb|EGJ34407.1| protease subunit of ATP-dependent Clp protease [Moorea producens
3L]
Length = 281
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 82 IYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAEL 141
I +P +M P Q +S Y TPPPDLPSLLL RIVY+GMPLV AVTEL++AEL
Sbjct: 57 IIAAPNIMKRPIQAVQSTYYGRPAYRTPPPDLPSLLLSERIVYLGMPLVSAVTELIIAEL 116
Query: 142 MYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGM 201
+YLQ+ DP PI +YINSTGT+R DG+ VG E+E FAI DT+ +K +HT+ +G+A+GM
Sbjct: 117 LYLQYDDPDKPIKIYINSTGTSRYDGQPVGFETEAFAICDTINYIKPPIHTICIGSALGM 176
Query: 202 ACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKH 261
A +LL+AGTKG R +P+A I++ QPR + G A+D+ IRA+E + N+ T++ +L+++
Sbjct: 177 AAMLLSAGTKGCRASLPNATIVLHQPRSYAQG--QATDIQIRAQEVLTNKKTMLDILSRN 234
Query: 262 TGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
+G +E + K + R +M +A+E+G+ID+VL
Sbjct: 235 SGQDQEKIAKDMDRFLYMTPHQAQEYGLIDRVL 267
>gi|330038335|ref|XP_003239570.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
gi|327206494|gb|AEA38672.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
Length = 243
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPSLLLH RIVY+GMPLVPAVTEL+VAE ++LQ+ + + P+++Y+NSTGT+ DG S
Sbjct: 49 PPDLPSLLLHNRIVYLGMPLVPAVTELIVAEFLFLQYENSEKPLFMYLNSTGTSNPDGSS 108
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
G E+E FAI DT+ +K VHT+ VG A G + +LL+ G R +P+A IMI QPR
Sbjct: 109 AGFETEAFAIADTMNYIKPSVHTICVGQAFGTSAMLLSNGEVNCRSALPNATIMIHQPRS 168
Query: 230 PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGV 289
+ G ASD+ I+A+E + NR +++AK++G S + + K R ++ + A E+G+
Sbjct: 169 QARG--QASDIAIKAREVLYNRKQCFEIIAKNSGQSLQKIMKDASRTKYLSPQEAMEYGL 226
Query: 290 IDKVL 294
IDK+L
Sbjct: 227 IDKIL 231
>gi|172036825|ref|YP_001803326.1| ATP-dependent Clp protease-like protein [Cyanothece sp. ATCC 51142]
gi|354554634|ref|ZP_08973938.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
gi|171698279|gb|ACB51260.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353553443|gb|EHC22835.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
Length = 226
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 146/213 (68%), Gaps = 12/213 (5%)
Query: 97 RSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQW 146
+SA Y + TPPPDL SLLL RI+Y+G+PL + VT+L++A+L+YLQ+
Sbjct: 7 QSAYYGDANFRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQF 66
Query: 147 MDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLL 206
+P+ PIY YINSTGT+ G+++G E+E FAI DT+ +K +HT+ +G A+G A ++L
Sbjct: 67 DNPEKPIYFYINSTGTSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMIL 126
Query: 207 AAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSE 266
+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++L+++TG +
Sbjct: 127 SAGTKGCRASLPHATIVLNQNRSGARG--QATDIQIRAKEVLHNKQTMLQILSENTGQTV 184
Query: 267 EFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
E + K I R +++ +AKE+G+ID+VL +E
Sbjct: 185 EKIAKDIDRTFYLTPEKAKEYGLIDRVLESTKE 217
>gi|428317796|ref|YP_007115678.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428241476|gb|AFZ07262.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 219
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 148/211 (70%), Gaps = 2/211 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M +P + +S Y E TPPPDLPSLLL RIVY+GMPLVPAVTEL++AEL++LQ+ D
Sbjct: 1 MNTPIKAVQSPYYGEGNSRTPPPDLPSLLLKERIVYLGMPLVPAVTELIIAELLFLQYED 60
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P PI +YINSTGT+ GE VG E+E FAI DT+ +K VHT+ +G+A+GM+ +LLAA
Sbjct: 61 PDKPIKIYINSTGTSGYSGEPVGFETEAFAICDTIKYIKPPVHTICLGSAMGMSAMLLAA 120
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKG R +PHA I++ QP+ + G ASD+ IRAKE + N+ T++++ A TG E
Sbjct: 121 GTKGFRASLPHASIVLHQPKAYTRG--QASDIQIRAKEVLANKATMLEIFASCTGQPIEK 178
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
+TK + R +M AKE+G+ID+VL +E
Sbjct: 179 ITKDMDRLLYMTPHEAKEYGLIDRVLESSEE 209
>gi|334118045|ref|ZP_08492135.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333460030|gb|EGK88640.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 219
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 149/211 (70%), Gaps = 2/211 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M +P + +S Y E TPPPDLPSLLL RIVY+GMPLVPAVTEL++AEL++LQ+ D
Sbjct: 1 MNTPIKAVQSPYYGEGNSRTPPPDLPSLLLKERIVYLGMPLVPAVTELIIAELLFLQYED 60
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P PI +YINSTGT+ GE VG E+E FAI DT+ +K VHT+ +G+A+GM+ +LLAA
Sbjct: 61 PDKPIKIYINSTGTSGYSGEPVGFETEAFAICDTIRYIKPPVHTICLGSAMGMSAMLLAA 120
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKG R +PHA I++ QP+ + G ASD+ IRAKE + N+ T++++ A TG E
Sbjct: 121 GTKGFRASLPHASIVLHQPKAYTRG--QASDIQIRAKEVLANKATMLEIFASCTGQPIEK 178
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
+TK + R ++ + AKE+G+ID+VL +E
Sbjct: 179 ITKDMDRLLYLTPQEAKEYGLIDRVLESSEE 209
>gi|67921361|ref|ZP_00514879.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416383635|ref|ZP_11684483.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67856473|gb|EAM51714.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357265221|gb|EHJ14014.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 226
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 144/213 (67%), Gaps = 12/213 (5%)
Query: 97 RSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQW 146
++ Y + TPPPDL SLLL RI+Y+G+PL + VT+L++A+L+YLQ+
Sbjct: 7 QAGYYGDTNFRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQF 66
Query: 147 MDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLL 206
+P+ PIY YINSTGT+ G+++G E+E FAI DT+ +K +HT+ +G A+G A ++L
Sbjct: 67 DNPEKPIYFYINSTGTSWYTGDAIGFETEAFAICDTMNYIKPPIHTICIGQAMGTAAMIL 126
Query: 207 AAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSE 266
+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++ +LA++TG +
Sbjct: 127 SAGTKGCRASLPHATIVLNQNRSGAQG--QATDIQIRAKEVLQNKQTMLTILAENTGQTA 184
Query: 267 EFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
E + K I R +++ +AKE+G+ID+VL +E
Sbjct: 185 EKIAKDIDRTFYLTPAKAKEYGLIDRVLESTKE 217
>gi|428207692|ref|YP_007092045.1| endopeptidase Clp [Chroococcidiopsis thermalis PCC 7203]
gi|428009613|gb|AFY88176.1| Endopeptidase Clp [Chroococcidiopsis thermalis PCC 7203]
Length = 219
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 151/208 (72%), Gaps = 2/208 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M SP + ++ Y ++ TPPPDLPSLLL RIVY+GMPLVPAVTEL++AEL+YLQ D
Sbjct: 1 MVSPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIIAELLYLQSDD 60
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P PI +YINSTGT+ +GE +G E+E FAIYDTL +K VHT+ +G+A+GMA +LL+A
Sbjct: 61 PDKPIKIYINSTGTSSYNGEPIGFETEAFAIYDTLRYIKPPVHTICIGSAMGMAAMLLSA 120
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GT G R +P+A I++ QP+ + G A+D+ IRAKE + N+ TL+ +LAK TG E
Sbjct: 121 GTPGCRASLPNANIILHQPKSYAQG--QATDIQIRAKEVLANKATLLDILAKTTGQPIEK 178
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
+ K + R +++ ++AKE+G+ID+VL +
Sbjct: 179 IGKDMDRLFYLTPQQAKEYGLIDRVLEK 206
>gi|218245804|ref|YP_002371175.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8801]
gi|257058850|ref|YP_003136738.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8802]
gi|16506759|gb|AAL23932.1|AF423176_1 hypothetical protein [Cyanothece sp. PCC 8801]
gi|218166282|gb|ACK65019.1| Endopeptidase Clp [Cyanothece sp. PCC 8801]
gi|256589016|gb|ACU99902.1| Endopeptidase Clp [Cyanothece sp. PCC 8802]
Length = 226
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 143/213 (67%), Gaps = 12/213 (5%)
Query: 97 RSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQW 146
+SA Y + TPPPDL SL+L RI+Y+GMPL + VT+L++A+L+YLQ+
Sbjct: 7 QSAYYGDTSFRTPPPDLESLMLKERIIYLGMPLFSSDDVKQQVGIDVTQLIIAQLLYLQF 66
Query: 147 MDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLL 206
DP PIY YINSTGT+ G+++G E+E FAI DT+ +K +HT+ +G A+G A ++L
Sbjct: 67 DDPDKPIYFYINSTGTSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMIL 126
Query: 207 AAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSE 266
+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++ +K+TG
Sbjct: 127 SAGTKGCRASLPHATIVLNQNRSGARG--QATDIQIRAKEVLSNKQTMLEIFSKNTGQPV 184
Query: 267 EFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
E + K R +++ ++AKE+G+ID+VL +E
Sbjct: 185 EKIAKDTDRTFYLTPQQAKEYGLIDRVLESTKE 217
>gi|452825129|gb|EME32127.1| ATP-dependent Clp protease, protease subunit isoform 1 [Galdieria
sulphuraria]
gi|452825130|gb|EME32128.1| ATP-dependent Clp protease, protease subunit isoform 2 [Galdieria
sulphuraria]
Length = 275
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 124/181 (68%), Gaps = 2/181 (1%)
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
H RI+Y+GMPL+PAVTEL++AE +YLQ+ + PIYLYINSTGT+ DG + G E+E FA
Sbjct: 84 HNRIIYLGMPLLPAVTELIIAEFLYLQYESGEKPIYLYINSTGTSNPDGSTAGFETEAFA 143
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
+ DT+ +K VHT+ VG A G A LLLAAG KG R +PHA +M+ QPR + G PAS
Sbjct: 144 VCDTMRYVKPPVHTICVGQAYGTAALLLAAGEKGFRAALPHATVMLHQPRSSTQG--PAS 201
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQ 298
D+ I+A+E + NR +LL++ TG E + K +R +M AKE+G+IDK+L +
Sbjct: 202 DIAIKAREVLYNRKVTFELLSESTGQPFEKIQKDSQRTKYMTPEEAKEYGIIDKILTSTK 261
Query: 299 E 299
E
Sbjct: 262 E 262
>gi|307152498|ref|YP_003887882.1| endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982726|gb|ADN14607.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 222
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 144/213 (67%), Gaps = 12/213 (5%)
Query: 97 RSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQW 146
++A Y + TPPPDL SLLL RIVY+GMPL + VT+L++A+L++LQ+
Sbjct: 3 QTAYYGDASFRTPPPDLESLLLKERIVYLGMPLFSSDDIKQQVGIDVTQLIIAQLLFLQF 62
Query: 147 MDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLL 206
DP PIY YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A+G A ++L
Sbjct: 63 DDPDKPIYFYINSTGTSWYTGDAIGFETEAFAICDTINYIKPPVHTICIGQAMGTAAMIL 122
Query: 207 AAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSE 266
+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++ +K+TG +
Sbjct: 123 SAGTKGCRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVLANKRTMLEIFSKNTGQAI 180
Query: 267 EFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
E + K + R +++ +AKE+G+ID+VL +E
Sbjct: 181 EKLAKDLDRTFYLTPAQAKEYGLIDRVLESRKE 213
>gi|113475005|ref|YP_721066.1| ATP-dependent Clp protease-like protein [Trichodesmium erythraeum
IMS101]
gi|110166053|gb|ABG50593.1| Endopeptidase Clp [Trichodesmium erythraeum IMS101]
Length = 229
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 147/222 (66%), Gaps = 13/222 (5%)
Query: 89 MASPAQ-VERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELV 137
M SP + V+ S+ Y + TPPPDL SL+L RIVY+G+PL + VT+L+
Sbjct: 1 MKSPIKAVQTSSYYGDVSFRTPPPDLESLMLKERIVYLGLPLFSSDEVKRNVGIDVTQLI 60
Query: 138 VAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGA 197
+A+L+YLQ+ +P+ PIY YINSTGT+ G+++G E+E FAI DT+ +K +HT+ +G
Sbjct: 61 IAQLLYLQFDNPEKPIYFYINSTGTSWYTGDAIGFETEAFAICDTMSYVKPPIHTICIGQ 120
Query: 198 AIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKL 257
A+G A ++L+AGTKG R +PHA I++ Q + + G A+D+ IRAKE +VN+ T + +
Sbjct: 121 AMGTAAMILSAGTKGYRASLPHATIVLNQAKTGARG--QATDISIRAKEVLVNKTTFLDI 178
Query: 258 LAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
L+K+TG S E + K R +M AKE+G+ID+VL +E
Sbjct: 179 LSKNTGQSVEKIAKDTDRMLYMTPEIAKEYGLIDQVLASRKE 220
>gi|220906938|ref|YP_002482249.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7425]
gi|219863549|gb|ACL43888.1| Endopeptidase Clp [Cyanothece sp. PCC 7425]
Length = 218
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 152/208 (73%), Gaps = 2/208 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M SP Q +S Y + TPPPDLPSLLL RIVY+GMPLVPAVTEL++AEL++LQ+ D
Sbjct: 1 MRSPIQAVQSPYYGDAFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIIAELLFLQYDD 60
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P+ PI +YINSTGT+R DGE +G E+E FAI DT+ +K +HT+ +G A+GMA +LL+A
Sbjct: 61 PEKPIKIYINSTGTSRYDGEPIGFETEAFAICDTMRYIKPPIHTICIGQAMGMAAMLLSA 120
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKG R +P+A I++ Q R + G A+D+ IRA+E + NR+ ++ +L+++TG E
Sbjct: 121 GTKGCRASLPNATIVLHQTRSYARG--QATDIQIRAREVLANREIMIDILSRNTGQPPEK 178
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++K + R ++M ++A E+G+ID+VL +
Sbjct: 179 ISKDMDRLFYMTPQQAVEYGLIDRVLEK 206
>gi|384247124|gb|EIE20612.1| hypothetical protein COCSUDRAFT_10544, partial [Coccomyxa
subellipsoidea C-169]
Length = 228
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 131/189 (69%), Gaps = 1/189 (0%)
Query: 106 PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRD 165
P PPDLPSLLL GRI YIGMPLVPAVTEL+++EL++L + P+ P+Y+YI+S G+
Sbjct: 4 PGQAPPDLPSLLLDGRICYIGMPLVPAVTELIISELLWLNFSYPEKPVYVYIHSIGSQTP 63
Query: 166 DGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQ 225
DG++VG ++E +AI DTL ++ E+HTV VG A G A ++LA+G KG RF +PHA+IM
Sbjct: 64 DGQAVGFDTEAYAIIDTLNYIRPEIHTVVVGQAFGNAAMILASGKKGCRFALPHARIMTA 123
Query: 226 QPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAK 285
PR+ S S+++I+A E N T V+ L+K+TG +E V K + R + +A
Sbjct: 124 PPRINRS-FGSTSNIMIKANELEYNTQTYVEFLSKYTGREKEEVRKDVGRNRYFTPEQAI 182
Query: 286 EFGVIDKVL 294
E+G+ID+++
Sbjct: 183 EYGLIDRIV 191
>gi|427714499|ref|YP_007063123.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
gi|427378628|gb|AFY62580.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
Length = 219
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 131/174 (75%), Gaps = 2/174 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL+VA+L++LQ+ DP+ PI +YINSTGT+R DGE VG E+E FAI
Sbjct: 33 RIVYLGMPLVPAVTELLVAQLLFLQYDDPEKPIRIYINSTGTSRYDGEPVGFETEAFAIC 92
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K VHT+ +G A+GMA LLL+AGTKG R + HA I++ Q + + G A+D+
Sbjct: 93 DTINYIKPPVHTICLGQAMGMAALLLSAGTKGYRASLAHATIVMHQTKSYARG--QATDI 150
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
IRA+E + N+ T+V++L+++TG + E +TK + R +M AKE+G+IDKVL
Sbjct: 151 QIRAREVLANKQTMVEILSRNTGQTPERITKDMDRLLYMTPDEAKEYGLIDKVL 204
>gi|427730533|ref|YP_007076770.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
gi|427366452|gb|AFY49173.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
Length = 220
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 131/176 (74%), Gaps = 2/176 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL+VA+L+YLQ DP+ PI +YINSTGT+ GE +G E+E FAIY
Sbjct: 34 RIVYLGMPLVPAVTELIVAQLLYLQSDDPEKPIKIYINSTGTSGYSGEPIGFETEAFAIY 93
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ +G+A+GMA +LL+AGTKG R +P+A I++ QP+ + G A+D+
Sbjct: 94 DTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPNASIILHQPKSYAQG--QATDI 151
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
IRAKE + N+ ++V +L++ TG E VTK + R ++M +AKE+G+ID+V +
Sbjct: 152 QIRAKEVLANKASMVDILSRTTGQPPEKVTKDMDRLFYMTPYQAKEYGLIDRVFEK 207
>gi|168033939|ref|XP_001769471.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679182|gb|EDQ65632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 127/187 (67%), Gaps = 3/187 (1%)
Query: 109 PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
PPPDLPS L RIV++ M LVPA TEL +AEL+YLQ+ DP+ IY+YINSTGTT+ DGE
Sbjct: 35 PPPDLPSYLFKNRIVFLAMSLVPAFTELFMAELLYLQYDDPEESIYMYINSTGTTK-DGE 93
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPR 228
+G E+E FAIYDT+ MK + T+ VG A G A LLLAAG+KG R +P A IM++QP
Sbjct: 94 KLGYETEAFAIYDTMRYMKPPIFTLCVGNAWGEAALLLAAGSKGNRACLPSATIMLKQPI 153
Query: 229 LPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
G A+D+ I KE ++ VKLL++HTG E +T IRRP + A ++G
Sbjct: 154 AQFRG--QATDIDIARKEVRNVKEEFVKLLSRHTGQPPEKITGDIRRPKYFKPDGAVDYG 211
Query: 289 VIDKVLW 295
+IDKVL+
Sbjct: 212 IIDKVLY 218
>gi|126657895|ref|ZP_01729048.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620835|gb|EAZ91551.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 226
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 144/213 (67%), Gaps = 12/213 (5%)
Query: 97 RSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQW 146
++ Y + TPPPDL SLLL RI+Y+G+PL + VT+L++A+L+YLQ+
Sbjct: 7 QAGYYGDSNFRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQF 66
Query: 147 MDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLL 206
+P PI+ YINSTGT+ G+++G E+E FAI DT+ +K +HT+ +G A+G A ++L
Sbjct: 67 DNPDKPIFFYINSTGTSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMIL 126
Query: 207 AAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSE 266
+AGTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++L+++TG +
Sbjct: 127 SAGTKGCRASLPHATIVLNQNRSGARG--QATDIQIRAKEVLHNKQTMLQILSQNTGQTP 184
Query: 267 EFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
E + K I R +++ +AKE+G+ID+VL +E
Sbjct: 185 EKIAKDIDRTFYLTPEKAKEYGLIDRVLESTKE 217
>gi|300869049|ref|ZP_07113651.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC 6506]
gi|300332960|emb|CBN58845.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC 6506]
Length = 222
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 143/209 (68%), Gaps = 13/209 (6%)
Query: 97 RSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQW 146
+S+ Y + TPPPDL SLLL RIVY+GMPL + VTEL++A+L+YLQ+
Sbjct: 2 QSSYYGDANYRTPPPDLESLLLKERIVYLGMPLFSSDEIKRNVGIDVTELIIAQLLYLQF 61
Query: 147 MDPKAPIYLYINSTGTT-RDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP+ PIY YINS+GT+ D+G ++G+E+E FAI DT+ +K VHT+ +G A+G A ++
Sbjct: 62 DDPEKPIYFYINSSGTSWGDEGYAIGLETEAFAICDTMSYIKPPVHTICIGQAMGTAAMI 121
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L+AGTKG R +PHA I++ Q + G A+D+ I A+E ++N+ T+V++ AK+TG +
Sbjct: 122 LSAGTKGFRASLPHATIVLNQSKTGGRG--QATDIQIMAQEVLLNKRTVVEIFAKNTGQT 179
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E + K + R +++ AKE+G++D+VL
Sbjct: 180 VEKIAKDMDRMFYLTPAEAKEYGLLDRVL 208
>gi|186681466|ref|YP_001864662.1| ATP-dependent Clp protease-like protein [Nostoc punctiforme PCC
73102]
gi|186463918|gb|ACC79719.1| peptidase S14, ClpP [Nostoc punctiforme PCC 73102]
Length = 220
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 128/176 (72%), Gaps = 2/176 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVYIGMPLVPAVTEL+VAEL++LQ DP+ PI +YINSTGT+ GE +G E+E FAIY
Sbjct: 34 RIVYIGMPLVPAVTELIVAELLFLQSDDPEKPIKIYINSTGTSGYSGEPIGFETEAFAIY 93
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ VG+A+GM+ +LL+AGTKG R +PH+ I++ QP+ + G A+D+
Sbjct: 94 DTMRYIKPPIHTICVGSAMGMSAMLLSAGTKGCRASLPHSSIILHQPKSYAQG--QATDI 151
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
IRA+E +VN+ LV +L + TG E +TK + R ++ AKE+G+ID+V +
Sbjct: 152 QIRAREVLVNKGALVDILHQTTGQPREKITKDMDRLLYLTPYEAKEYGLIDRVFEK 207
>gi|75907529|ref|YP_321825.1| ATP-dependent Clp protease-like protein [Anabaena variabilis ATCC
29413]
gi|75701254|gb|ABA20930.1| Peptidase S14, ClpP [Anabaena variabilis ATCC 29413]
Length = 220
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 130/176 (73%), Gaps = 2/176 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL+VA+L+YLQ DP PI +YINSTGT+ GE +G E+E FAIY
Sbjct: 34 RIVYLGMPLVPAVTELIVAQLLYLQSDDPDKPIKIYINSTGTSGYSGEPIGFETEAFAIY 93
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ +G+A+GMA +LL+AGTKG R +P+A I++ QP+ + G A+D+
Sbjct: 94 DTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPNASIILHQPKSYAQG--QATDI 151
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
IRA+E +VN+ ++V + A+ TG + E +TK + R +M +AK++G+ID+V +
Sbjct: 152 QIRAREVLVNKGSMVDIFARTTGQAPEKITKDMDRLLYMTPYQAKDYGLIDRVFEK 207
>gi|434402515|ref|YP_007145400.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
gi|428256770|gb|AFZ22720.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
Length = 220
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 131/176 (74%), Gaps = 2/176 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL+VAEL+YLQ DP+ PI +YINSTGT+ GE +G E+E FAI+
Sbjct: 34 RIVYLGMPLVPAVTELIVAELLYLQSDDPEKPIKIYINSTGTSGYSGEPIGFETEAFAIF 93
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ VG+A+GMA +LL+AGTKG R +P++ I++ QP+ + G A+D+
Sbjct: 94 DTMKYIKPPIHTICVGSAMGMAAMLLSAGTKGCRASLPNSSIILHQPKSYAQG--QATDI 151
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
IRA+E +VN+ ++V +L++ TG + E + K + R +M +AKE+G+ID+V +
Sbjct: 152 QIRAREVLVNKGSIVDILSRTTGQATEKIIKDMDRLLYMTPYQAKEYGLIDRVFEK 207
>gi|282896314|ref|ZP_06304336.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198810|gb|EFA73689.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 229
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 144/214 (67%), Gaps = 12/214 (5%)
Query: 91 SPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVP----------AVTELVVAE 140
SP + +++ Y+++ TPPPDL SLLL RIVY+G PLV VT+L++A+
Sbjct: 4 SPIKAVQTSYYSDNWYRTPPPDLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQ 63
Query: 141 LMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIG 200
L+YL++ +P+ PI+ YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G AIG
Sbjct: 64 LLYLKFDNPEKPIFFYINSTGTSWYTGDAIGYETEAFAICDTIDYIKTPVHTICIGQAIG 123
Query: 201 MACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAK 260
A L+L+ GTKG R +PHA I++ QPR + G A+D+ I AKE + N+ ++ + +K
Sbjct: 124 TAALILSCGTKGFRASLPHATIVLNQPRSGTRG--QATDIQIYAKEVLSNKAAILDIFSK 181
Query: 261 HTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
+TG E ++K + R +++ + AKE+G+ID+VL
Sbjct: 182 NTGQQPEKISKDMERMFYLTPQAAKEYGLIDRVL 215
>gi|282900570|ref|ZP_06308512.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194370|gb|EFA69325.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 229
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 143/214 (66%), Gaps = 12/214 (5%)
Query: 91 SPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVP----------AVTELVVAE 140
SP + +++ Y+++ TPPPDL SLLL RIVY+G PLV VT+L++A+
Sbjct: 4 SPIKAVQTSYYSDNWYRTPPPDLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQ 63
Query: 141 LMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIG 200
L+YL++ +P PI+ YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G AIG
Sbjct: 64 LLYLKFDNPDKPIFFYINSTGTSWYTGDAIGYETEAFAICDTIDYIKTPVHTICIGQAIG 123
Query: 201 MACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAK 260
A L+L+ GTKG R +PHA I++ QPR + G A+D+ I AKE + N+ ++ + +K
Sbjct: 124 TAALILSCGTKGFRASLPHATIVLNQPRSGTRG--QATDIQIYAKEVLANKAAILDIFSK 181
Query: 261 HTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
+TG E ++K + R +++ + AKE+G+ID+VL
Sbjct: 182 NTGQQPEKISKDMERMFYLTPQAAKEYGLIDRVL 215
>gi|359457307|ref|ZP_09245870.1| ATP-dependent Clp protease-like protein [Acaryochloris sp. CCMEE
5410]
Length = 228
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 137/202 (67%), Gaps = 12/202 (5%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYI 157
TPPPDL SLLL RIVY+GMPL + VTEL++A+L++LQ+ DP PI+ YI
Sbjct: 22 TPPPDLQSLLLKERIVYLGMPLFSSDDIKRQVGFDVTELIIAQLLFLQFDDPDKPIFFYI 81
Query: 158 NSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMM 217
NSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A+G A ++L+AGTKG R +
Sbjct: 82 NSTGTSWYGGDAIGFETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGYRASL 141
Query: 218 PHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
HA I++ Q R + G ASD+ IRA+E + N+ T++ +L K+TG + E ++K + R +
Sbjct: 142 GHATIVLNQARSGAQG--QASDIQIRAQEVLANKTTMLDILQKNTGQTAEKISKDMDRMF 199
Query: 278 HMDSRRAKEFGVIDKVLWRGQE 299
++ AK++G+ID+VL +E
Sbjct: 200 YLSPEEAKDYGLIDRVLASQKE 221
>gi|434393185|ref|YP_007128132.1| ATP-dependent Clp protease proteolytic subunit [Gloeocapsa sp. PCC
7428]
gi|428265026|gb|AFZ30972.1| ATP-dependent Clp protease proteolytic subunit [Gloeocapsa sp. PCC
7428]
Length = 219
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 146/208 (70%), Gaps = 2/208 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M SP + ++ Y ++ TPPPDLPSLLL RIVY+GMPLVPAVTEL++AEL+YLQ D
Sbjct: 1 MESPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELLIAELLYLQSED 60
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P PI +YINSTGT+ GE VG E+E FAIYDT+ +K +HT+ +G A+GM+ +LL+A
Sbjct: 61 PDKPIRVYINSTGTSGYSGELVGFETEAFAIYDTMKYIKPPIHTICIGMAMGMSAMLLSA 120
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKG R +PHA I++ QP+ + G ASD+ IRAKE + N+ ++ +LA TG + E
Sbjct: 121 GTKGCRASLPHATIVLHQPKSYAQG--QASDIQIRAKEVLANKAAMLDILASTTGQAREK 178
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
+ K + R +++ A E+G+ID+VL +
Sbjct: 179 IEKDMDRIFYISPEHAVEYGLIDRVLTK 206
>gi|17231850|ref|NP_488398.1| ATP-dependent Clp protease-like protein [Nostoc sp. PCC 7120]
gi|17133494|dbj|BAB76057.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 220
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 129/176 (73%), Gaps = 2/176 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL+VA+L+YLQ DP PI +YINSTGT+ GE +G E+E FAIY
Sbjct: 34 RIVYLGMPLVPAVTELIVAQLLYLQSDDPDKPIKIYINSTGTSGYSGEPIGFETEAFAIY 93
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ +G+A+GMA +LL+AGTKG R +P + I++ QP+ + G A+D+
Sbjct: 94 DTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPSSSIILHQPKSYAQG--QATDI 151
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
IRA+E +VN+ ++V + A+ TG + E +TK + R +M +AK++G+ID+V +
Sbjct: 152 QIRAREVLVNKGSMVDIFARTTGQAPEKITKDMDRLLYMTPYQAKDYGLIDRVFEK 207
>gi|158335483|ref|YP_001516655.1| ATP-dependent Clp protease-like protein [Acaryochloris marina
MBIC11017]
gi|158305724|gb|ABW27341.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Acaryochloris marina MBIC11017]
Length = 228
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 137/202 (67%), Gaps = 12/202 (5%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYI 157
TPPPDL SLLL RIVY+GMPL + VTEL++A+L++LQ+ DP PI+ YI
Sbjct: 22 TPPPDLQSLLLKERIVYLGMPLFSSDDIKRQVGFDVTELIIAQLLFLQFDDPDKPIFFYI 81
Query: 158 NSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMM 217
NSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A+G A ++L+AGTKG R +
Sbjct: 82 NSTGTSWYGGDAIGFETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGYRASL 141
Query: 218 PHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
HA I++ Q R + G ASD+ IRA+E + N+ T++ +L K+TG + E ++K + R +
Sbjct: 142 GHATIVLNQARSGAQG--QASDIQIRAQEVLANKATMLDILQKNTGQTAEKISKDMDRMF 199
Query: 278 HMDSRRAKEFGVIDKVLWRGQE 299
++ AK++G+ID+VL +E
Sbjct: 200 YLSPEEAKDYGLIDRVLASQKE 221
>gi|168061571|ref|XP_001782761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665734|gb|EDQ52408.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 147/257 (57%), Gaps = 3/257 (1%)
Query: 39 PNPMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERS 98
P+ M + N+P+ + AS + +G + +P+ ++ + R
Sbjct: 97 PSQMDTFMVENNPYQRQAERVTEASISSASRYQDGTGMWSATGLDGAPSRLSMSVSMYRG 156
Query: 99 ASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYIN 158
RP T PPDLPSLLL RI Y+GM +VPAVTEL++AEL++L + +P PIY YIN
Sbjct: 157 GGSAGGRPKTAPPDLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPTKPIYFYIN 216
Query: 159 STGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMP 218
S+GT + ES+G E+E +AI DT+ +K +V+T+ G A G A +LL+ G KG R + P
Sbjct: 217 SSGTQNEKKESIGFETEAYAIADTIRYVKSKVYTINCGQAFGQAAMLLSLGEKGYRALQP 276
Query: 219 HAKIMIQQPRL-PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
+ + P++ SSG ++D+ I+ KE N D + LLA TG S+E + IRRP
Sbjct: 277 SSSTKLYSPKVNQSSG--SSTDMWIKGKELDANTDYYIDLLASGTGKSKEVIANDIRRPR 334
Query: 278 HMDSRRAKEFGVIDKVL 294
+ + A ++G+ DK++
Sbjct: 335 YFRPQEAVDYGLADKII 351
>gi|87125531|ref|ZP_01081376.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
RS9917]
gi|86166831|gb|EAQ68093.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
RS9917]
Length = 211
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 138/202 (68%), Gaps = 12/202 (5%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYI 157
TPPPDLPSL+L RIVY+G+PL VTEL++A+L+YL++ +P PIY YI
Sbjct: 3 TPPPDLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNPDKPIYFYI 62
Query: 158 NSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMM 217
NSTGT+ G+++G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +
Sbjct: 63 NSTGTSWYTGDAIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAAL 122
Query: 218 PHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
PHA I++ QPR + G A+D+ IRAKE + N+ ++++L+++TG S E + K R
Sbjct: 123 PHASIVLHQPRSGARG--QATDIQIRAKEVLHNKRAMLEILSENTGRSVEQLAKDSDRMS 180
Query: 278 HMDSRRAKEFGVIDKVLWRGQE 299
++ +A E+G+ID+VL +E
Sbjct: 181 YLTPEQAVEYGLIDRVLGSRKE 202
>gi|116073335|ref|ZP_01470597.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068640|gb|EAU74392.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 221
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 140/197 (71%), Gaps = 12/197 (6%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYI 157
TPPPDLPSL+L RIVY+G+PL VTEL++A+L+YL++ +P+ PIY YI
Sbjct: 16 TPPPDLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNPEKPIYFYI 75
Query: 158 NSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMM 217
NSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A+G A ++L+AGTKG+R +
Sbjct: 76 NSTGTSWHTGDAIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSAGTKGQRAAL 135
Query: 218 PHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
PH+ I++ QPR + G A+D+ IRAKE + N+ +++++L+ +TG + E +++ R
Sbjct: 136 PHSSIVLHQPRSGARG--QATDIQIRAKEVLQNKRSMLEILSANTGRTVEQLSQDSDRMS 193
Query: 278 HMDSRRAKEFGVIDKVL 294
+++ ++A E+G+ID+VL
Sbjct: 194 YLNPQQAVEYGLIDRVL 210
>gi|168026989|ref|XP_001766013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682656|gb|EDQ69072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 148/257 (57%), Gaps = 3/257 (1%)
Query: 39 PNPMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERS 98
P+ M + N+P+ + + AS + +G + +P+ ++ + R
Sbjct: 54 PSQMDMFMVENNPYQRQAERVSEASISSASRYQEGTGLWTATGLDGAPSRLSMSVSMYRG 113
Query: 99 ASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYIN 158
RP T PPDLPSLLL RI Y+GM +VPAVTEL++AEL++L + +P PIY YIN
Sbjct: 114 GGSAGGRPKTAPPDLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPSKPIYFYIN 173
Query: 159 STGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMP 218
S+GT + ES+G E+E +AI DT+ +K +V+T+ G A G A +LL+ G KG R + P
Sbjct: 174 SSGTQNEKKESIGFETEAYAIADTIRYVKSKVYTINCGQAFGQAAMLLSIGEKGFRALQP 233
Query: 219 HAKIMIQQPRL-PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
+ + P++ SSG ++D+ I+ KE N D + LLA TG S+E + IRRP
Sbjct: 234 SSSTKLYSPKVNQSSG--SSTDMWIKGKELDANTDYYIDLLASGTGKSKEEIANDIRRPR 291
Query: 278 HMDSRRAKEFGVIDKVL 294
+ + A ++G+ DK++
Sbjct: 292 YFRPQEAIDYGLADKII 308
>gi|440684796|ref|YP_007159591.1| ATP-dependent Clp protease proteolytic subunit [Anabaena cylindrica
PCC 7122]
gi|428681915|gb|AFZ60681.1| ATP-dependent Clp protease proteolytic subunit [Anabaena cylindrica
PCC 7122]
Length = 220
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 129/176 (73%), Gaps = 2/176 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL+VA+L+YLQ DP+ PI +YINSTGT+ GE +G E+E FAIY
Sbjct: 34 RIVYLGMPLVPAVTELIVAQLLYLQSDDPEKPIKIYINSTGTSGYSGEPIGFETEAFAIY 93
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ +G+A+GMA +LL+AGTKG R +P++ I++ QP+ + G A+D+
Sbjct: 94 DTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPNSNIILHQPKSYAQG--QATDI 151
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
IRAKE + N+ +++ +L+ TG ++K + R ++M +AKE+G+ID+V +
Sbjct: 152 QIRAKEVLANKASMLDILSHTTGQEVAKISKDMDRLFYMTPYQAKEYGLIDRVFEK 207
>gi|255639455|gb|ACU20022.1| unknown [Glycine max]
Length = 364
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 132/191 (69%), Gaps = 3/191 (1%)
Query: 105 RPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTR 164
RP T PPDLPSLLL RI Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS+GT
Sbjct: 144 RPKTAPPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGTLN 203
Query: 165 DDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMI 224
+ E+VG E+E ++I D + +K +V+TV G A G A +LL+ GTKG R + P++ +
Sbjct: 204 EKNETVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKL 263
Query: 225 QQPRLP-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
P++ SSG + D+ I+AKE N + ++LLAK TG S+E + K ++RP ++ ++
Sbjct: 264 YLPKVNRSSGAVI--DMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRPKYLQAQD 321
Query: 284 AKEFGVIDKVL 294
A ++G+ DK++
Sbjct: 322 AIDYGIADKII 332
>gi|356536107|ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Glycine max]
Length = 372
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 132/191 (69%), Gaps = 3/191 (1%)
Query: 105 RPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTR 164
RP T PPDLPSLLL RI Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS+GT
Sbjct: 144 RPKTAPPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGTLN 203
Query: 165 DDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMI 224
+ E+VG E+E ++I D + +K +V+TV G A G A +LL+ GTKG R + P++ +
Sbjct: 204 EKNETVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKL 263
Query: 225 QQPRLP-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
P++ SSG + D+ I+AKE N + ++LLAK TG S+E + K ++RP ++ ++
Sbjct: 264 YLPKVNRSSGAVI--DMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRPKYLQAQD 321
Query: 284 AKEFGVIDKVL 294
A ++G+ DK++
Sbjct: 322 AIDYGIADKII 332
>gi|302773329|ref|XP_002970082.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
gi|300162593|gb|EFJ29206.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
Length = 300
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 127/191 (66%), Gaps = 3/191 (1%)
Query: 105 RPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTR 164
RP + PPDLPSLLL RIVY+GM +VPAVTEL+VAE+++L + +P PIYLYIN +GT
Sbjct: 108 RPKSAPPDLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGTQN 167
Query: 165 DDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMI 224
+ ESVG E+E +AI DT+ +K +V+TV G A G A +LL+ G KG R + P + +
Sbjct: 168 EKKESVGFETEAYAIADTMSYVKSKVYTVNCGMAFGQAAMLLSVGEKGFRAVQPSSSTKL 227
Query: 225 QQPRL-PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
P++ SSG A D+ I+AKE N + LLAK TG EE + K I+RP + ++
Sbjct: 228 YAPKVNQSSG--SAIDMFIKAKELDSNTKYYIDLLAKGTGKPEEEIAKDIQRPKYFKAKE 285
Query: 284 AKEFGVIDKVL 294
A E+G+ DKV+
Sbjct: 286 AVEYGLADKVI 296
>gi|356575728|ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Glycine max]
Length = 372
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 132/191 (69%), Gaps = 3/191 (1%)
Query: 105 RPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTR 164
RP T PPDLPSLLL RI Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS+GT
Sbjct: 144 RPKTAPPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTLN 203
Query: 165 DDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMI 224
+ E+VG E+E ++I D + +K +V+TV G A G A +LL+ GTKG R + P++ +
Sbjct: 204 EKNETVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKL 263
Query: 225 QQPRLP-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
P++ SSG + D+ I+AKE N + ++LLAK TG S+E + K ++RP ++ ++
Sbjct: 264 YLPKVNRSSGAVI--DMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRPKYLQAQD 321
Query: 284 AKEFGVIDKVL 294
A ++G+ DK++
Sbjct: 322 AIDYGIADKII 332
>gi|412990157|emb|CCO19475.1| ATP-dependent Clp protease-like protein [Bathycoccus prasinos]
Length = 236
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 126/184 (68%), Gaps = 3/184 (1%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPS + RIVY+GM LVP+VTEL++AEL+YLQ+ D PI+LYINSTGT++ +G+
Sbjct: 54 PPDLPSYIFKERIVYLGMTLVPSVTELILAELLYLQYEDNNKPIHLYINSTGTSK-EGQK 112
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
G +SE FAIYDT+ +K VHT+A+G A G A +LL+AG KG R +P A IMI+QP
Sbjct: 113 YGYDSEAFAIYDTIQYVKPPVHTIAIGTAWGEAAMLLSAGKKGHRAALPSASIMIKQPIN 172
Query: 230 PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGV 289
G AS++ I+ E + +K+L+ TG S E V K I RP + D + AK++G+
Sbjct: 173 SFRG--QASELEIQRNETRNTKSQTLKILSLSTGKSIEEVEKDINRPRYFDPQEAKDYGL 230
Query: 290 IDKV 293
IDKV
Sbjct: 231 IDKV 234
>gi|302807086|ref|XP_002985274.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
gi|300147102|gb|EFJ13768.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
Length = 357
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 127/191 (66%), Gaps = 3/191 (1%)
Query: 105 RPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTR 164
RP + PPDLPSLLL RIVY+GM +VPAVTEL+VAE+++L + +P PIYLYIN +GT
Sbjct: 129 RPKSAPPDLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGTQN 188
Query: 165 DDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMI 224
+ ESVG E+E +AI DT+ +K +V+TV G A G A +LL+ G KG R + P + +
Sbjct: 189 EKKESVGFETEAYAIADTMSYVKSKVYTVNCGMAFGQAAMLLSVGEKGFRAVQPSSSTKL 248
Query: 225 QQPRL-PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
P++ SSG A D+ I+AKE N + LLAK TG EE + K I+RP + ++
Sbjct: 249 YAPKVNQSSG--SAIDMFIKAKELDSNTKYYIDLLAKGTGKPEEEIAKDIQRPKYFKAKE 306
Query: 284 AKEFGVIDKVL 294
A E+G+ DKV+
Sbjct: 307 AVEYGLADKVI 317
>gi|428215429|ref|YP_007088573.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
gi|428003810|gb|AFY84653.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
Length = 217
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 146/206 (70%), Gaps = 2/206 (0%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMD 148
M SP Q +S Y + TPPPDLPSLLL RIVY+GMPLVP VTEL++++L+YLQ+ D
Sbjct: 1 MNSPIQAVQSPYYGDGYQRTPPPDLPSLLLKERIVYLGMPLVPKVTELIISQLLYLQYDD 60
Query: 149 PKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAA 208
P+ PI +YINSTGT+ + G+ V E+E FAI DT+ +K V+T+ +G A+GM+ +LL+A
Sbjct: 61 PEKPINIYINSTGTSNESGQPVAFETEAFAICDTIKYIKPPVNTICIGMAVGMSAMLLSA 120
Query: 209 GTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEF 268
GTKG R +P+A I++ QP+ + G ASD+ IRAKE + NR T++ +LA++TG + E
Sbjct: 121 GTKGCRTSLPNATIVLHQPKSYTRG--QASDIQIRAKEVLANRKTMIDILAENTGQTPEK 178
Query: 269 VTKTIRRPYHMDSRRAKEFGVIDKVL 294
+ K + R +++ A ++ +ID+VL
Sbjct: 179 IIKDMDRVFYLSPEEAVKYNLIDRVL 204
>gi|18402863|ref|NP_564560.1| ATP-dependent Clp protease proteolytic subunit-related protein 1
[Arabidopsis thaliana]
gi|75315328|sp|Q9XJ35.1|CLPR1_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 1, chloroplastic; Short=ClpR1;
AltName: Full=nClpP5; Flags: Precursor
gi|8569101|gb|AAF76446.1|AC015445_13 Identical to nClpP5 from Arabidopsis thaliana gb|AB022330 and
contains prenyltransferase PF|00432 and CLP protease
PF|00574 domains. ESTs gb|H76908, gb|AA605567,
gb|T21932, gb|T22976 come from this gene [Arabidopsis
thaliana]
gi|5360595|dbj|BAA82069.1| nClpP5 [Arabidopsis thaliana]
gi|15010752|gb|AAK74035.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|23308343|gb|AAN18141.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|332194380|gb|AEE32501.1| ATP-dependent Clp protease proteolytic subunit-related protein 1
[Arabidopsis thaliana]
Length = 387
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 129/191 (67%), Gaps = 3/191 (1%)
Query: 104 HRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTT 163
RP T PPDLPSLLL RI Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS GT
Sbjct: 163 ERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQ 222
Query: 164 RDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIM 223
+ E+VG E+E +AI DT+ K +V+T+ G A G A +LL+ G KG R + PH+
Sbjct: 223 NEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTK 282
Query: 224 IQQPRLP-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
+ P++ SSG A D+ I+AKE N + ++LLAK TG S+E + + I+RP ++ ++
Sbjct: 283 LYLPKVNRSSG--AAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQ 340
Query: 283 RAKEFGVIDKV 293
A ++G+ DK+
Sbjct: 341 AAIDYGIADKI 351
>gi|399949581|gb|AFP65239.1| ATP-dependent Clp protease proteolytic subunit [Chroomonas
mesostigmatica CCMP1168]
Length = 264
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
H RIVY+GMPLVPAVTEL+VAE +YLQ+ + + PI++Y+NSTGT+ DG S G E+E FA
Sbjct: 74 HNRIVYLGMPLVPAVTELIVAEFLYLQYENAEKPIFMYLNSTGTSNPDGSSAGFETEAFA 133
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
I DT+ +K VHT+ VG A+G +LL++G G+R +P+A IM+ QPR + G AS
Sbjct: 134 IADTMNYIKPPVHTICVGQALGTCAMLLSSGEPGQRSALPNATIMVHQPRTQARG--QAS 191
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
D+ I+A+E + NR +++AK +G S + V K R ++ + A E+G+IDK+L
Sbjct: 192 DIAIKAREVLYNRKQCFEIIAKTSGQSLQKVMKDASRTKYLSPKEAVEYGIIDKIL 247
>gi|427418190|ref|ZP_18908373.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
gi|425760903|gb|EKV01756.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
Length = 230
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 132/197 (67%), Gaps = 12/197 (6%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYI 157
TPPPDL SLLL RIVY+G PLV + VT L++A+L+YL++ DP PIY YI
Sbjct: 21 TPPPDLQSLLLKERIVYLGTPLVSSDDYKRQMGMDVTRLIIAQLLYLEFDDPDKPIYFYI 80
Query: 158 NSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMM 217
NSTGT+ G+++G E+E FAI DT+ ++ VHT+ +G A+G A ++LAAGTKG R +
Sbjct: 81 NSTGTSWYTGDALGFETEAFAICDTMRYIRPPVHTICIGQAMGTASMILAAGTKGFRASL 140
Query: 218 PHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
P+A I++ QPR + G A+D+ IRAKE + NR+ + +L+ TG + E + K R +
Sbjct: 141 PNATIVLNQPRTGARG--QATDIQIRAKEVLANREATLDILSHSTGQTPEKLQKDTDRMF 198
Query: 278 HMDSRRAKEFGVIDKVL 294
++ AKE+G+ID+VL
Sbjct: 199 YLTPAEAKEYGLIDRVL 215
>gi|449019594|dbj|BAM82996.1| ATP-dependent Clp protease proteolytic subunit [Cyanidioschyzon
merolae strain 10D]
Length = 288
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
H RIVYIGMPL V EL++AEL+YL + DP P+Y+YINSTGT DG + G E++ FA
Sbjct: 98 HNRIVYIGMPLTAPVCELIIAELLYLNYNDPDKPVYVYINSTGTMGLDGSTAGFETDAFA 157
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
I DT+ +K V+T+ VG+A G+A ++LA G KG R +P+A IM+ QPR + G A+
Sbjct: 158 IIDTMNYIKPPVYTICVGSAFGLAAVILACGDKGNRAALPNASIMLHQPRGTARG--QAA 215
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
D+ I+A+E M NR +++LA+HTG + E K R +M + AKEFG+IDK+L
Sbjct: 216 DIAIKAREIMYNRKVAMEILAEHTGRTAEECLKASERTKYMTPQEAKEFGIIDKIL 271
>gi|19698857|gb|AAL91164.1| unknown protein [Arabidopsis thaliana]
gi|23197684|gb|AAN15369.1| unknown protein [Arabidopsis thaliana]
Length = 305
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 127/195 (65%), Gaps = 5/195 (2%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D K PIYLYINSTGTT+ +
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEKKPIYLYINSTGTTK-N 158
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G ++E FAIYD + +K + T+ VG A G A LLL AG KG R +P + IMI+Q
Sbjct: 159 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 218
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+DV I KE + +VKL +KH G S E + ++RP + A E
Sbjct: 219 PIARFQG--QATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVE 276
Query: 287 FGVIDKVLW--RGQE 299
+G+IDKV++ RG +
Sbjct: 277 YGIIDKVVYNERGSQ 291
>gi|297852688|ref|XP_002894225.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
gi|297340067|gb|EFH70484.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 129/191 (67%), Gaps = 3/191 (1%)
Query: 104 HRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTT 163
RP T PPDLPSLLL RI Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS GT
Sbjct: 163 ERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQ 222
Query: 164 RDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIM 223
+ E+VG E+E +AI DT+ K +V+T+ G A G A +LL+ G KG R + PH+
Sbjct: 223 NEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTK 282
Query: 224 IQQPRLP-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
+ P++ SSG A D+ I+AKE N + ++LLAK TG S+E + + I+RP ++ ++
Sbjct: 283 LYLPKVNRSSG--AAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQ 340
Query: 283 RAKEFGVIDKV 293
A ++G+ DK+
Sbjct: 341 AAIDYGIADKI 351
>gi|254421954|ref|ZP_05035672.1| Clp protease [Synechococcus sp. PCC 7335]
gi|196189443|gb|EDX84407.1| Clp protease [Synechococcus sp. PCC 7335]
Length = 230
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 134/202 (66%), Gaps = 12/202 (5%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYI 157
TPPPDL SLLL RIVY+G PLV + VT+L++A+L+YL++ DP+ PIY YI
Sbjct: 21 TPPPDLQSLLLKERIVYLGTPLVSSDDFKRQMGVDVTKLIIAQLLYLEFDDPEKPIYFYI 80
Query: 158 NSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMM 217
NSTGT+ G++VG E+E FAI DTL +K VHT+ +G A+G A ++L++G KG R +
Sbjct: 81 NSTGTSWYTGDAVGFETEAFAICDTLKYIKPPVHTICLGQAMGTAAMILSSGAKGSRASL 140
Query: 218 PHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
PHA I++ Q R + G A+D+ IRA+E + N+ + +L+ +TG S E + K R +
Sbjct: 141 PHATIVLNQTRSGAQG--QATDIQIRAEEVLANKAAQLDILSANTGQSTEKLDKDTDRMF 198
Query: 278 HMDSRRAKEFGVIDKVLWRGQE 299
++ AK++G+ID+VL +E
Sbjct: 199 YLTPEEAKDYGLIDRVLSSTKE 220
>gi|297800408|ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
gi|297313924|gb|EFH44347.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 127/195 (65%), Gaps = 5/195 (2%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-N 158
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G ++E FAIYD + +K + T+ VG A G A LLL AG KG R +P + IMI+Q
Sbjct: 159 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 218
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+DV I KE + +VKL +KH G S E + ++RP + A E
Sbjct: 219 PIARFQG--QATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPSEAVE 276
Query: 287 FGVIDKVLW--RGQE 299
+G+IDKV++ RG +
Sbjct: 277 YGIIDKVVYNERGSQ 291
>gi|427721126|ref|YP_007069120.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
7507]
gi|427353562|gb|AFY36286.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
7507]
Length = 220
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 125/176 (71%), Gaps = 2/176 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLV AVTEL+VAEL++LQ DP PI +YINSTGT+ GE +G E+E FAI+
Sbjct: 34 RIVYLGMPLVAAVTELIVAELLFLQSDDPDKPIKIYINSTGTSGYSGEPIGFETEAFAIF 93
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ +G+A+GMA +LL+AGT G R +PHA I++ QP+ + G A+D+
Sbjct: 94 DTMKYIKPPIHTICIGSAMGMAAMLLSAGTPGCRASLPHASIILHQPKSYAQG--QATDI 151
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
IRA+E + N+ ++V +L++ TG E V K + R +M AKE+G+ID+V +
Sbjct: 152 QIRAREVLANKASMVNILSRTTGQLPEKVAKDMDRLLYMTPYEAKEYGLIDRVFEK 207
>gi|18414804|ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
[Arabidopsis thaliana]
gi|75301253|sp|Q8LB10.1|CLPR4_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 4, chloroplastic; Short=ClpR4;
Flags: Precursor
gi|21593086|gb|AAM65035.1| ATP-dependent Clp protease proteolytic subunit ClpR4, putative
[Arabidopsis thaliana]
gi|26450085|dbj|BAC42162.1| putative ClpP protease complex subunit ClpR4 [Arabidopsis thaliana]
gi|332658442|gb|AEE83842.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
[Arabidopsis thaliana]
Length = 305
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 127/195 (65%), Gaps = 5/195 (2%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-N 158
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G ++E FAIYD + +K + T+ VG A G A LLL AG KG R +P + IMI+Q
Sbjct: 159 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 218
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+DV I KE + +VKL +KH G S E + ++RP + A E
Sbjct: 219 PIARFQG--QATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVE 276
Query: 287 FGVIDKVLW--RGQE 299
+G+IDKV++ RG +
Sbjct: 277 YGIIDKVVYNERGSQ 291
>gi|352096271|ref|ZP_08957151.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676965|gb|EHA60116.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 225
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 134/197 (68%), Gaps = 12/197 (6%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYI 157
TPPPDLPSL+L RIVY+G+PL VTEL++A+L++L++ +P PIY YI
Sbjct: 20 TPPPDLPSLMLKERIVYLGLPLFSDGDTKRQLGLDVTELIIAQLLFLEFDNPDKPIYFYI 79
Query: 158 NSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMM 217
NSTGT+ GES+G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +
Sbjct: 80 NSTGTSWYSGESIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAAL 139
Query: 218 PHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
PHA I++ QPR + G A+D+ IRAKE + N+ ++++L+ +TG S E ++ R
Sbjct: 140 PHASIVLHQPRSGARG--QATDIQIRAKEVLHNKRAMLEILSTNTGRSVEELSADSDRMS 197
Query: 278 HMDSRRAKEFGVIDKVL 294
++ + A +G+ID+VL
Sbjct: 198 YLTPQEAVSYGLIDRVL 214
>gi|113954996|ref|YP_729944.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9311]
gi|113882347|gb|ABI47305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 225
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 134/197 (68%), Gaps = 12/197 (6%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYI 157
TPPPDLPSL+L RIVY+G+PL VTEL++A+L++L++ +P PIY YI
Sbjct: 20 TPPPDLPSLMLKERIVYLGLPLFSDGDAKRQMGLDVTELIIAQLLFLEFDNPDKPIYFYI 79
Query: 158 NSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMM 217
NSTGT+ GES+G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +
Sbjct: 80 NSTGTSWYSGESIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAAL 139
Query: 218 PHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPY 277
PHA I++ QPR + G A+D+ IRAKE + N+ ++++L+ +TG S E ++ R
Sbjct: 140 PHASIVLHQPRSGARG--QATDIQIRAKEVLHNKRAMLEILSTNTGRSVEELSADSDRMS 197
Query: 278 HMDSRRAKEFGVIDKVL 294
++ + A +G+ID+VL
Sbjct: 198 YLTPQEAVTYGLIDRVL 214
>gi|308807867|ref|XP_003081244.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
gi|116059706|emb|CAL55413.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
Length = 335
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 123/188 (65%), Gaps = 1/188 (0%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPSLLL+ RI YIGM LVPAVTELVVAEL+YL + + P Y+YINS G+ + GE
Sbjct: 101 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSINEKGEV 160
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
VGM++E +AI DT+ ++ +HTVAVG G A L+LA G KG+R +PH +I P+L
Sbjct: 161 VGMDNEAYAILDTMRYIRSPIHTVAVGKCHGNASLILAGGDKGRRHALPHVQISTGPPKL 220
Query: 230 PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGV 289
+ +V IRA E + DT + L+A++TG E V K + R + +A E+G+
Sbjct: 221 NRT-FDSTQNVQIRANECAMYEDTYMDLMAEYTGKDGETVRKDLDRTRYFTPNQAIEYGI 279
Query: 290 IDKVLWRG 297
IDKV+ +G
Sbjct: 280 IDKVITKG 287
>gi|224103735|ref|XP_002313173.1| predicted protein [Populus trichocarpa]
gi|222849581|gb|EEE87128.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
Query: 106 PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRD 165
P++ PPDLPSLLL RI Y+GMP+VPAVTEL+VA+ MYL + DP PIYLYINS+GT +
Sbjct: 167 PESAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNE 226
Query: 166 DGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQ 225
E+VG E+E +AI D + K ++TV G A G A +LL+ G KG R + P++ +
Sbjct: 227 KMETVGSETEAYAIADIMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSSTKLY 286
Query: 226 QPRLP-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRA 284
P++ SSG A D+ I+AKE N + ++LLAK TG +E + K I+RP ++ ++ A
Sbjct: 287 LPKVNRSSG--AAVDMWIKAKELDANTEYYIELLAKGTGKPKEELVKDIQRPKYLKAQEA 344
Query: 285 KEFGVIDKVL 294
++G+ DK+L
Sbjct: 345 IDYGIADKLL 354
>gi|160331817|ref|XP_001712615.1| clpP1 [Hemiselmis andersenii]
gi|159766064|gb|ABW98290.1| clpP1 [Hemiselmis andersenii]
Length = 257
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
H RIVY+GMPLVPAVTEL+VAE +YLQ+ + P+++Y+NSTGT+ DG S G E+E FA
Sbjct: 67 HNRIVYLGMPLVPAVTELIVAEFLYLQYENADKPVFMYLNSTGTSNPDGSSAGFETEAFA 126
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
I DT+ +K VHT+ VG A+G +LL++G G+R +P++ IM+ QPR + G AS
Sbjct: 127 IADTMNYIKPPVHTICVGQALGTCAMLLSSGEPGQRAALPNSTIMVHQPRTQAKG--QAS 184
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
D+ I+AKE + NR +++AK +G S + V K R ++ A E+G+IDK+L
Sbjct: 185 DIAIKAKEVLYNRKQCFEIIAKTSGQSLQKVMKDASRTKYLTPGEAVEYGIIDKIL 240
>gi|255573147|ref|XP_002527503.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223533143|gb|EEF34901.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 308
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 3/190 (1%)
Query: 106 PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRD 165
P + PPDLPSLLL RI Y+GMP+VPAVTEL+VA+ MYL + D PIYLYINS+GT +
Sbjct: 84 PRSAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYDDSSKPIYLYINSSGTQNE 143
Query: 166 DGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQ 225
E+VG E+E +AI D + K V+TV G A G A +LL+ G KG R + P+A +
Sbjct: 144 KMETVGSETEAYAIADAMFYCKSTVYTVNCGMAYGQAGMLLSLGAKGYRALQPNASTKLY 203
Query: 226 QPRLP-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRA 284
P++ SSG + D+ I+AKE N + + LLAK TG ++E + K I+RP + +S+ A
Sbjct: 204 LPKVNRSSGAVI--DMWIKAKELDANTEYYIDLLAKGTGKTKEEINKDIQRPKYFNSKEA 261
Query: 285 KEFGVIDKVL 294
E+G+ DK++
Sbjct: 262 IEYGLADKIV 271
>gi|224126447|ref|XP_002329556.1| predicted protein [Populus trichocarpa]
gi|118483146|gb|ABK93479.1| unknown [Populus trichocarpa]
gi|222870265|gb|EEF07396.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+
Sbjct: 105 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-G 163
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G E+E FAIYD + +K + T+ VG A G A LLLAAG++G R +P + IM++Q
Sbjct: 164 GEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLAAGSRGNRSALPSSTIMMKQ 223
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+DV + KE + LV LLAKH G E + I RP + A E
Sbjct: 224 PIGRFQG--QATDVELARKEIKNVKTELVNLLAKHIGKLPEEIEADISRPKYFSPTEAVE 281
Query: 287 FGVIDKVLWRGQET 300
+G+IDKV++ + T
Sbjct: 282 YGIIDKVIYNERTT 295
>gi|255580803|ref|XP_002531222.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223529182|gb|EEF31158.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 314
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 126/195 (64%), Gaps = 5/195 (2%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+
Sbjct: 109 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKG- 167
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G E+E FAI+D + +K + T+ VG A G A LLLAAG+KG R +P + IMI+Q
Sbjct: 168 GEKLGYETEAFAIHDVMGYVKPPIFTLCVGNAWGEAALLLAAGSKGNRSALPSSTIMIKQ 227
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+DV + KE + LV LLAK+ G S + I RP + A E
Sbjct: 228 PIGRFQG--QATDVELARKEISNVKAELVNLLAKYIGKSPGEIEADISRPKYFTPAEAVE 285
Query: 287 FGVIDKVLW--RGQE 299
+G+IDKVL+ RG E
Sbjct: 286 YGIIDKVLYNERGTE 300
>gi|145343664|ref|XP_001416434.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576659|gb|ABO94727.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 251
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 125/185 (67%), Gaps = 3/185 (1%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPS + RIVY+GM LVP+VTEL++AEL+YLQ+ D K PI LYINSTG+++ DG+
Sbjct: 68 PPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKKKPIQLYINSTGSSK-DGQK 126
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
G ++E FAIYDT+ + VHT+AVG A G A +LLAAG++G R +P A IM++QP
Sbjct: 127 YGYDTEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLAAGSRGNRAALPSASIMLKQPLS 186
Query: 230 PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGV 289
G AS++ I+ +E + ++++LAK TG V I RP + D A ++G+
Sbjct: 187 AFRG--QASELEIQRQEMRNTKRQMLEILAKTTGKDIATVESDINRPLYFDPTEAVKYGL 244
Query: 290 IDKVL 294
IDKVL
Sbjct: 245 IDKVL 249
>gi|145350809|ref|XP_001419790.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144580022|gb|ABO98083.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 381
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 126/195 (64%), Gaps = 1/195 (0%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPSLLL+ RI YIGM LVPAVTELVVAEL+YL + + P Y+YINS G+ + GE
Sbjct: 147 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSLNEKGEV 206
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
VGM++E +AI DT+ ++ ++HTVAVG G A L+LAAG KG R +PH +I Q P+L
Sbjct: 207 VGMDNEAYAILDTMRYIRPKIHTVAVGKCHGNASLILAAGDKGCRHALPHVQISTQPPKL 266
Query: 230 PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGV 289
+ +V IRA E + DT + +++ +G + V K + R + +A E+G+
Sbjct: 267 NRT-FDSTQNVQIRANECALYEDTYMGFMSEFSGKDIDVVRKDLDRTRYFTPNQAIEYGL 325
Query: 290 IDKVLWRGQETIMAE 304
IDKV+ +G + A+
Sbjct: 326 IDKVITKGLNVMEAQ 340
>gi|443323687|ref|ZP_21052691.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
gi|442786669|gb|ELR96398.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
Length = 229
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 126/184 (68%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL+ VTEL+VA+L+YLQ+ DP PIY+YINSTGT+ GE++
Sbjct: 34 RIVYLGLPLISPDEYKDQIGIDVTELIVAQLLYLQFDDPDKPIYMYINSTGTSWYGGEAI 93
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAIYDTL +K VHT+ +G A+G A ++LAAG KG R +PHA I++ Q R
Sbjct: 94 GFETEAFAIYDTLKYIKPPVHTICIGQAMGTAAMILAAGAKGCRASLPHATIILHQARQG 153
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + NR ++++LA +T S E + + R Y+M+ ++A E+G+I
Sbjct: 154 TQG--QATDIQIRAKEVLANRRMMLEMLADNTTQSVEKIQQDTDRMYYMNPQQALEYGLI 211
Query: 291 DKVL 294
DK+L
Sbjct: 212 DKIL 215
>gi|162606046|ref|XP_001713538.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|13794458|gb|AAK39833.1|AF165818_41 ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
Length = 254
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 119/176 (67%), Gaps = 2/176 (1%)
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
H RIVY+GMPLVPAVTEL+VAE +YLQ+ + + P+Y+Y+NSTGT+ DG S G E+E FA
Sbjct: 66 HNRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVYMYLNSTGTSNPDGSSAGFETEAFA 125
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
I DT+ +K VHT+ VG A G +LL++G G+R +P+A IMI QP + G AS
Sbjct: 126 IADTMNYIKPPVHTICVGQAFGTCAMLLSSGEPGQRAALPNATIMIHQPTSRARG--QAS 183
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
D+ I+A+E + NR ++LA+ +G S E V K R ++ A E+G+ID++L
Sbjct: 184 DIAIKAREVLYNRKQCFEILAETSGQSLEKVMKDASRTKYLSPMEAVEYGIIDRIL 239
>gi|434399880|ref|YP_007133884.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270977|gb|AFZ36918.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 228
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 125/184 (67%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RI+Y+G+PLV VTEL++A+L++LQ+ DP PIY+YINSTGT+ GES+
Sbjct: 33 RIIYLGLPLVSPDEYKDQIGIDVTELIIAQLLFLQFDDPDKPIYMYINSTGTSWYGGESI 92
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++LA+GTKG R +PHA I++ Q R
Sbjct: 93 GFETEAFAICDTMNYIKPPVHTICIGQAMGTAAMILASGTKGCRASLPHATIILHQARQG 152
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ +++L AK+TG + E VTK R ++M AK +G+I
Sbjct: 153 AQG--QATDIQIRAKEVLHNKHMMMELFAKNTGQTVEKVTKDTDRMFYMTPEEAKNYGII 210
Query: 291 DKVL 294
DKVL
Sbjct: 211 DKVL 214
>gi|443478433|ref|ZP_21068188.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
gi|443016285|gb|ELS30981.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
Length = 252
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 130/184 (70%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RI+Y G+PLV VTEL++A+L+YLQ+ DP+ PI++YINSTGT+ G+++
Sbjct: 57 RIIYFGLPLVSPDEYKQQLGVDVTELLIAQLLYLQYEDPEKPIFMYINSTGTSWYTGDAI 116
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++LA+GTKG R +P+A I++ Q R
Sbjct: 117 GFETEAFAICDTLNYIKPPVHTICLGQAMGTAAMILASGTKGFRASLPNATIVLHQARRQ 176
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ I+AKE + NR++++K+L++ TG S E +TK + R ++M +AKE+G+I
Sbjct: 177 TRG--QASDLQIQAKEVLTNRESMLKILSRTTGKSSEVLTKDMDRMFYMTPEQAKEYGLI 234
Query: 291 DKVL 294
D+VL
Sbjct: 235 DRVL 238
>gi|303274128|ref|XP_003056387.1| ATP-dependent clp protease [Micromonas pusilla CCMP1545]
gi|226462471|gb|EEH59763.1| ATP-dependent clp protease [Micromonas pusilla CCMP1545]
Length = 294
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 141/220 (64%), Gaps = 13/220 (5%)
Query: 101 YNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINST 160
YNEH+P TPPPDLPSLLL RIVYIGMPLVPAVTEL+V+EL+Y+Q+ D P Y+YINST
Sbjct: 67 YNEHKPKTPPPDLPSLLLDSRIVYIGMPLVPAVTELIVSELLYMQYTDATRPCYIYINST 126
Query: 161 GTTRDDGESVGMESEG--------FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKG 212
G R DGE + FA L Q ++TV G AIG AC++L+AG KG
Sbjct: 127 GCQRADGEVLPYSDNANNKVPHLRFAENFPLQQ----IYTVGTGVAIGQACMILSAGNKG 182
Query: 213 KRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKT 272
KRFM HA M+ QPR+PS+G A ++ ++ KE + + +V +L+ TG+S+E +
Sbjct: 183 KRFMTAHATAMLHQPRIPSTGQRQAIELHLKWKEVLEQKKAMVDILSLTTGHSKEKIDND 242
Query: 273 IRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWD 312
I+RP ++ ++ A +G++DKV+ + I + V + WD
Sbjct: 243 IQRPLYLTAKDAIAYGIVDKVVDKNSRAIDS-VLSGDAWD 281
>gi|428771385|ref|YP_007163175.1| ATP-dependent Clp protease proteolytic subunit [Cyanobacterium
aponinum PCC 10605]
gi|428685664|gb|AFZ55131.1| ATP-dependent Clp protease proteolytic subunit [Cyanobacterium
aponinum PCC 10605]
Length = 227
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 128/184 (69%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PLV VTEL++A+L+YLQ+ DP+ PIYLYINSTGT+ G+S+
Sbjct: 33 RIVYLGLPLVSPDEYKDQLGVDVTELIIAQLLYLQFDDPEKPIYLYINSTGTSWYGGDSI 92
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++LA+GTKG R +PHA I++ Q R
Sbjct: 93 GFETEAFAICDTINYIKPPVHTICLGQAMGTAAMILASGTKGCRASLPHATIILHQARQG 152
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA+E +VN+ ++ +L+ TG +E + K R ++M+ ++AKE+G+I
Sbjct: 153 AQG--QATDIQIRAREVIVNKRVMLDILSAKTGQPKEKIEKDTDRMFYMNPQQAKEYGII 210
Query: 291 DKVL 294
DK+L
Sbjct: 211 DKIL 214
>gi|308799978|ref|XP_003074770.1| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC) [Ostreococcus tauri]
gi|119358788|emb|CAL52028.2| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC), partial [Ostreococcus tauri]
Length = 244
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 125/185 (67%), Gaps = 3/185 (1%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPS + RIVY+GM LVP+VTEL++AEL+YLQ+ D K PI LYINSTG+++ DG+
Sbjct: 63 PPDLPSFIFQERIVYLGMTLVPSVTELILAELLYLQYEDKKKPIQLYINSTGSSK-DGKK 121
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
G +SE FAIYDT+ + VHT+AVG A G A +LLA+G+KG+R +P A IM++QP
Sbjct: 122 YGYDSEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLASGSKGQRAALPSASIMLKQPLS 181
Query: 230 PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGV 289
G AS++ I+ +E + ++ +LAK TG + I RP + + A ++G+
Sbjct: 182 SFRG--QASELEIQRQEMRNTKKQMLDILAKTTGRDIATIETDINRPLYFEPSEAIKYGL 239
Query: 290 IDKVL 294
IDKVL
Sbjct: 240 IDKVL 244
>gi|225428973|ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic [Vitis vinifera]
gi|296083061|emb|CBI22465.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 126/188 (67%), Gaps = 3/188 (1%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDG 167
T PPDLPSLLL RI Y+GMP+VPAV EL+VA+ M+L + +P PIYLYINSTGT +
Sbjct: 165 TAPPDLPSLLLDARICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYINSTGTQNEKM 224
Query: 168 ESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQP 227
E+VG E+E +AI D++ K +V+TV G A G A +LL+ G KG R + P+A + P
Sbjct: 225 ETVGSETEAYAIADSMAYCKSDVYTVNCGTAYGQAAMLLSVGAKGYRGLQPNASTKLYLP 284
Query: 228 RLP-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
++ SSG D+ I+AKE N + ++LLAK TG ++E + K + RP ++ ++ A +
Sbjct: 285 KVNRSSG--ATIDMWIKAKELDANSEYYIELLAKGTGKTKEEIKKDVERPKYLQAQEAID 342
Query: 287 FGVIDKVL 294
+G+ DK++
Sbjct: 343 YGLADKII 350
>gi|411118655|ref|ZP_11391036.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712379|gb|EKQ69885.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 228
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 145/214 (67%), Gaps = 11/214 (5%)
Query: 91 SPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAE 140
SP Q +S Y + TPPPDLPSLLL RI+Y+G+PLV + VT+L++A+
Sbjct: 2 SPIQAAQSPYYGDAYYRTPPPDLPSLLLKERIIYLGLPLVSSDDFKRQLGVDVTKLIIAQ 61
Query: 141 LMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIG 200
L+YLQ+ DP+ PI+ YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A+G
Sbjct: 62 LLYLQFNDPEKPIFFYINSTGTSWYTGDAIGQETEAFAICDTINYVKPPVHTICIGQAMG 121
Query: 201 MACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAK 260
A ++L+AGTKG R +PHA I++ QPR+ G A+D+ IRAKE + N+ + +L++
Sbjct: 122 TAAMILSAGTKGFRASLPHATIVLNQPRM-GMGRSQATDIQIRAKEVLANKQATLDILSQ 180
Query: 261 HTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
+TG E + K R ++M ++AKE+G+ID+VL
Sbjct: 181 NTGQPPEKIAKDTDRMFYMTPQQAKEYGLIDRVL 214
>gi|307109710|gb|EFN57947.1| hypothetical protein CHLNCDRAFT_11056, partial [Chlorella
variabilis]
Length = 200
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 126/188 (67%), Gaps = 2/188 (1%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
D PPDLPS L RIVY+GM LVPAVTELV+AE++YLQ+ +P PIY+YINSTG +
Sbjct: 12 DQTPPDLPSYLFKERIVYVGMSLVPAVTELVLAEMLYLQYDNPTRPIYMYINSTGVIKGS 71
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
G+ +G ESE FAIYDT+ +K V TV VG+A G A +LLAAG G+R +P IMI+Q
Sbjct: 72 GK-LGYESEAFAIYDTMRYIKPPVATVCVGSAFGEAAMLLAAGEAGRRAALPSTSIMIRQ 130
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P + + ASD+ I E +V+LL+KHTG+ EE V + I RP + + A E
Sbjct: 131 P-MQRYTQMQASDIDIYRNELRKTNAEVVRLLSKHTGHGEEQVARDISRPKYFNPYEAIE 189
Query: 287 FGVIDKVL 294
+G+ID+VL
Sbjct: 190 YGIIDRVL 197
>gi|428774096|ref|YP_007165884.1| endopeptidase Clp [Cyanobacterium stanieri PCC 7202]
gi|428688375|gb|AFZ48235.1| Endopeptidase Clp [Cyanobacterium stanieri PCC 7202]
Length = 228
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 129/189 (68%), Gaps = 12/189 (6%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PLV VTEL++A+L++LQ+ DP PIYLYINSTGT+ GES+
Sbjct: 33 RIVYLGLPLVSPDEYKDQIGIDVTELIIAQLLFLQFDDPDKPIYLYINSTGTSWYGGESI 92
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++LA+GTKG R +P+A I++ Q R
Sbjct: 93 GFETEAFAICDTINYIKPPVHTICLGQAMGTAAMILASGTKGCRASLPNATIILHQSRQG 152
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA+E +VN+ ++ +LA+ TG E + K R ++M+ ++AKE+G+I
Sbjct: 153 AQG--QATDIQIRAREVIVNKKAMMNILAEKTGQPVEKIEKDTDRMFYMNPQQAKEYGLI 210
Query: 291 DKVLWRGQE 299
D++L +E
Sbjct: 211 DRILESSKE 219
>gi|255071097|ref|XP_002507630.1| predicted protein [Micromonas sp. RCC299]
gi|226522905|gb|ACO68888.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 289
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 122/184 (66%), Gaps = 3/184 (1%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPS + RIVY+GM LVP+VTEL++AEL+YLQ+ D PIYLYINSTGT++ +G+
Sbjct: 38 PPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKTKPIYLYINSTGTSK-EGQK 96
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
G ++E FAIYDT+ + VHTVAVG A G A +LLA+G KG R +P A IMI+QP
Sbjct: 97 YGYDTEAFAIYDTIKYVNSPVHTVAVGTAWGEAAMLLASGEKGNRAALPSASIMIKQPID 156
Query: 230 PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGV 289
G A+D+ I+ KE + ++LL+K E + K I RP + + A ++G+
Sbjct: 157 AFRG--QATDLEIQRKEMRNTKKQTLELLSKGINKPIEELEKDINRPKYFNPWEAVDYGL 214
Query: 290 IDKV 293
IDK+
Sbjct: 215 IDKL 218
>gi|428776589|ref|YP_007168376.1| endopeptidase Clp [Halothece sp. PCC 7418]
gi|428690868|gb|AFZ44162.1| Endopeptidase Clp [Halothece sp. PCC 7418]
Length = 228
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 146/221 (66%), Gaps = 12/221 (5%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVP----------AVTELVV 138
M SP + ++ Y TPPPDLPSLLL RIVY+G+PLV VTEL++
Sbjct: 1 MNSPIEAVQAPYYGGGNTRTPPPDLPSLLLKERIVYLGLPLVSPDEYKEQLGIDVTELII 60
Query: 139 AELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAA 198
A+L+YLQ+ D + PIY+YINSTGT+ GES+G E+E FAI DT+ + V+T+ +G A
Sbjct: 61 AQLLYLQFEDREKPIYMYINSTGTSWYGGESIGFETEAFAICDTINYIAPPVNTICIGQA 120
Query: 199 IGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 258
+G A ++L++GTKG R +PHA I++ QPR + G A+D+ IRAKE + N+ ++++L
Sbjct: 121 MGTAAMILSSGTKGYRASLPHATIILNQPRQGAQG--QATDIQIRAKEVLANKQAMLEIL 178
Query: 259 AKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
+K+TG E + K R +++ + AKE+G+ID+VL +E
Sbjct: 179 SKNTGQPAEKIAKDSDRMFYLSPQEAKEYGLIDRVLESTKE 219
>gi|388520115|gb|AFK48119.1| unknown [Medicago truncatula]
Length = 373
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 128/186 (68%), Gaps = 3/186 (1%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPSLLL RI Y+GMP+VPAVTEL++A+LM+L + +P P+Y+YINS+GT + E+
Sbjct: 153 PPDLPSLLLDSRICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGTQNEKNET 212
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
VG E++ ++I D + +K +V+TV + A G A ++L+ G KG R ++PH+ + P++
Sbjct: 213 VGSETDAYSIADMISHIKSDVYTVNLAMAYGQAAMILSLGKKGYRAVLPHSSAKVFLPKV 272
Query: 230 P-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
SSG A+D+ I+AKE N + ++LLAK TG S+E + K ++R + + A E+G
Sbjct: 273 HRSSG--SAADMWIKAKELEANSEYYIELLAKGTGKSKEEIAKDVQRTRYFQPQDAIEYG 330
Query: 289 VIDKVL 294
+ DK++
Sbjct: 331 LADKIM 336
>gi|443324641|ref|ZP_21053380.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
gi|442795740|gb|ELS05088.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
Length = 224
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 124/184 (67%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PLV VTEL+VA+L++LQ+ DP+ PIY+YINSTGT+ G+S+
Sbjct: 29 RIVYLGLPLVSPDEYKDQIGVDVTELIVAQLLFLQFDDPEKPIYMYINSTGTSWYGGDSI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L+AG KG R +PHA I++ Q R
Sbjct: 89 GFETEAFAICDTMNYIKPPVHTICIGQAMGTAAMILSAGAKGCRASLPHATIILHQARQG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ ++ + AK+TG +E + K R +M + AKE+G+I
Sbjct: 149 AQG--QATDIQIRAKEVLENKKAVLDIFAKNTGQPQEKLAKDTDRMLYMTPQDAKEYGLI 206
Query: 291 DKVL 294
DKVL
Sbjct: 207 DKVL 210
>gi|354567564|ref|ZP_08986733.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542836|gb|EHC12297.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 225
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 127/186 (68%), Gaps = 10/186 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES------VGMES 174
RIVY+G PL VT+L++AEL+YLQ DP PI +YINSTGT+ DG S G E+
Sbjct: 34 RIVYLGTPLFAEVTKLIIAELLYLQSEDPDKPIKIYINSTGTS--DGSSGQMARLFGFET 91
Query: 175 EGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGL 234
E FAIYDT+ +K +HT+ +G A+GMA +LL+AGTKG R + H+ I++ QPR + G
Sbjct: 92 EAFAIYDTMKYIKPPIHTICIGKAVGMAAVLLSAGTKGCRASLAHSSIVLHQPRSYAQG- 150
Query: 235 LPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I+AKE + N++ +V +L+++TG +E + K + R ++M ++A E+G+ID+V
Sbjct: 151 -QATDIQIQAKEVITNKEAMVDILSRNTGQPKEKIVKDMDRHFYMTPQQAVEYGLIDRVF 209
Query: 295 WRGQET 300
+ + T
Sbjct: 210 EKSEIT 215
>gi|170077810|ref|YP_001734448.1| ATP-dependent Clp protease-like protein [Synechococcus sp. PCC
7002]
gi|169885479|gb|ACA99192.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 228
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 126/184 (68%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PLV VTEL++A+L++LQ+ DP PIY+YINSTGT+ G+S+
Sbjct: 34 RIVYLGLPLVSPDEYKDQIGVDVTELIIAQLLFLQFDDPDKPIYMYINSTGTSWYGGDSI 93
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL + VHT+ +G A+G A ++LAAGTKG R +PH+ I++ Q R
Sbjct: 94 GFETEAFAICDTLNYITPPVHTICLGQAMGTAAMILAAGTKGCRASLPHSTIILHQARQG 153
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ IRAKE + N+ T++++++K+TG E + K R ++M ++A E+G+I
Sbjct: 154 AQG--QASDIQIRAKEVIENKRTILQMMSKYTGQPLEKLEKDTDRMFYMTPQQALEYGII 211
Query: 291 DKVL 294
DKVL
Sbjct: 212 DKVL 215
>gi|409990520|ref|ZP_11273883.1| ATP-dependent Clp protease-like protein [Arthrospira platensis str.
Paraca]
gi|409938617|gb|EKN79918.1| ATP-dependent Clp protease-like protein [Arthrospira platensis str.
Paraca]
Length = 202
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 131/194 (67%), Gaps = 11/194 (5%)
Query: 116 LLLHGRIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRD 165
+LL RI+Y+G PLV + VT+L++A+L+YLQ+ DP+ PI+ YINSTGT+
Sbjct: 1 MLLKERIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIFFYINSTGTSWY 60
Query: 166 DGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQ 225
G+++G ++E FAI DT+ +K VHT+ +G A+G A ++L+AGTKG R +PHA I++
Sbjct: 61 TGDAIGQDTEAFAICDTINYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLN 120
Query: 226 QPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAK 285
QPR+ G A+D+ IRAKE + N+ +++ +L+K+TG E + K R +++ AK
Sbjct: 121 QPRM-GMGRSQATDIQIRAKEVLANKASILGILSKNTGQPVEKIAKDTDRMFYLTPEAAK 179
Query: 286 EFGVIDKVLWRGQE 299
E+G+ID+VL +E
Sbjct: 180 EYGLIDRVLESTKE 193
>gi|317970580|ref|ZP_07971970.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CB0205]
Length = 225
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 127/184 (69%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ +P+ PI+ YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWYSGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L+AGTKG R +PHA I++ QPR
Sbjct: 89 GFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGHRAALPHASIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ IRAKE + N+ T++++LA +TG S E ++K R ++ + +A EFG+I
Sbjct: 149 ARG--QASDIQIRAKEVLHNKRTMLEMLAANTGKSTEELSKASDRMTYLTAEQAVEFGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|427736766|ref|YP_007056310.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
gi|427371807|gb|AFY55763.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
Length = 221
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 122/174 (70%), Gaps = 3/174 (1%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+G PLVP VT+L++AEL+YLQ DP PI +YINS GT+ D + + E+E FAIY
Sbjct: 34 RIVYLGAPLVPEVTKLIIAELLYLQSEDPDKPIKIYINSVGTSFGD-QPIAFETEAFAIY 92
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +HT+ +G A+GMA +LL+AGTKG R +PHA I+++QP + G A+D+
Sbjct: 93 DTMRYIKPPIHTICIGQAMGMAAMLLSAGTKGCRAALPHASIVLKQPISGTRG--QATDI 150
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I AKE VN++ +V++ A++TG + V K + R +++ +A E+G+ID+V
Sbjct: 151 QIMAKEVFVNKEAMVEIFARNTGQDKAKVKKDMDRLFYITPDQAVEYGLIDRVF 204
>gi|297745678|emb|CBI40932.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 125/189 (66%), Gaps = 3/189 (1%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
D PPPDLPS L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+
Sbjct: 77 DQPPPDLPSYLFKNRIVYLGMSLVPSVTELILAEFLYLQYDDAEKPIYLYINSTGTTK-G 135
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G E+E FAIYD + +K + T+ VG A G A LLLAAG KG R +P + IMI+Q
Sbjct: 136 GEKLGYETEAFAIYDVMGYVKSPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIKQ 195
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+D+ + KE + LVKL AKH G S E + IRRP + A E
Sbjct: 196 PIARFQG--QATDIDLARKEVKNVKAELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVE 253
Query: 287 FGVIDKVLW 295
+G+IDKVL+
Sbjct: 254 YGIIDKVLY 262
>gi|359495737|ref|XP_003635075.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Vitis vinifera]
Length = 297
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 125/189 (66%), Gaps = 3/189 (1%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
D PPPDLPS L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+
Sbjct: 92 DQPPPDLPSYLFKNRIVYLGMSLVPSVTELILAEFLYLQYDDAEKPIYLYINSTGTTK-G 150
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G E+E FAIYD + +K + T+ VG A G A LLLAAG KG R +P + IMI+Q
Sbjct: 151 GEKLGYETEAFAIYDVMGYVKSPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIKQ 210
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+D+ + KE + LVKL AKH G S E + IRRP + A E
Sbjct: 211 PIARFQG--QATDIDLARKEVKNVKAELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVE 268
Query: 287 FGVIDKVLW 295
+G+IDKVL+
Sbjct: 269 YGIIDKVLY 277
>gi|254431834|ref|ZP_05045537.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626287|gb|EDY38846.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 232
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 129/184 (70%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ +P+ PI+ YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDEAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWFTGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L+AGTKG+R +PHA I++ QPR
Sbjct: 89 GFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGQRAALPHATIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ IRA+E + N+ T++++LA +TG S E ++K R ++ + +AK++G+I
Sbjct: 149 AQG--QASDIQIRAQEVLHNKRTMLQMLADNTGKSVEQLSKDSDRMTYLTAEQAKDYGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|298491709|ref|YP_003721886.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233627|gb|ADI64763.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 229
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 143/214 (66%), Gaps = 12/214 (5%)
Query: 91 SPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVVAE 140
SP + +++ Y + TPPPDLPSLLL RIVY+GMPLV A VT+L++A+
Sbjct: 4 SPIKAVQASYYGDSSYRTPPPDLPSLLLKERIVYLGMPLVSADEYKRQIGVDVTKLIIAQ 63
Query: 141 LMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIG 200
L+YL++ +P+ PI+ YINSTGT+ G+S+G E+E FAI DT+ +K VHT+ +G AIG
Sbjct: 64 LLYLKFDNPEKPIFFYINSTGTSWYTGDSIGYETEAFAICDTIDYIKTPVHTICIGQAIG 123
Query: 201 MACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAK 260
A L+L+AGTKG R +PHA I++ QPR + G A+D+ I AKE + N+ ++ + +K
Sbjct: 124 TAALILSAGTKGFRASLPHATIVLNQPRSGTRG--QATDIQIYAKEVLANKAAILDIFSK 181
Query: 261 HTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
+TG + + K R +++ + AKE+G+ID VL
Sbjct: 182 NTGQTPAKIAKDTERMFYLTPQEAKEYGLIDIVL 215
>gi|427724370|ref|YP_007071647.1| ATP-dependent Clp protease proteolytic subunit [Leptolyngbya sp.
PCC 7376]
gi|427356090|gb|AFY38813.1| ATP-dependent Clp protease proteolytic subunit [Leptolyngbya sp.
PCC 7376]
Length = 230
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 127/189 (67%), Gaps = 12/189 (6%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PLV VTEL++A+L++LQ+ DP PI++YINSTGT+ G+S+
Sbjct: 35 RIVYLGLPLVSPDEYKDQIGVDVTELIIAQLLFLQFDDPDKPIFMYINSTGTSWYGGDSI 94
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL + VHT+ +G A+G A ++LAAGTKG R +PH+ I++ Q R
Sbjct: 95 GFETEAFAICDTLNYITPPVHTICLGQAMGTAAMILAAGTKGCRASLPHSTIILHQARQG 154
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ IRAKE + N+ T++ +++K+TG + + + K R ++M +A E+G+I
Sbjct: 155 AQG--QASDIQIRAKEVIDNKRTIMDMMSKYTGQTIDKLEKDTDRMFYMTPEQALEYGII 212
Query: 291 DKVLWRGQE 299
DKVL Q+
Sbjct: 213 DKVLESSQD 221
>gi|298713496|emb|CBJ27051.1| ATP-dependent Clp protease proteolytic subunit [Ectocarpus
siliculosus]
Length = 323
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 168/295 (56%), Gaps = 28/295 (9%)
Query: 2 STSFLQAPMAALVPSTSVHSLRSKSTRSLKTFCSAKIPNPMPAHINPNDPFLSKLAAAAA 61
S +FL +P A V ++ + R ++TR+ S +PA +P P + L
Sbjct: 24 SAAFLSSPRLAKVGASRSNGAR-EATRTGAMHMSG-----LPADFDPLSPSMDHL----- 72
Query: 62 ASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQV--ERSASYNEHRPDTPPPDLPSLLLH 119
+ +++ S + P+++ V +R+ + R PP LPSLLLH
Sbjct: 73 ----SMIDQASKGRS--------QPSMIGGAGGVTEDRNTDLDGARVGPPPD-LPSLLLH 119
Query: 120 GRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAI 179
RIVY+GMPLVPAVTEL++AEL+YL + P+Y+YIN+ GT+ DG ++G E+E FAI
Sbjct: 120 NRIVYLGMPLVPAVTELIIAELLYLNYESASKPVYMYINTPGTSTPDGRAIGFETEAFAI 179
Query: 180 YDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASD 239
D + +K V+T+ VG A G+ +LLA+G KG R +P+A IM+ QPR + G ASD
Sbjct: 180 SDCMNYIKPPVYTIGVGQAFGLGAMLLASGEKGHRSALPNASIMLHQPRSMARG--QASD 237
Query: 240 VLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
+ I+AKE M NR T ++L++ G + V + R ++M A E+G+IDKVL
Sbjct: 238 IAIKAKEVMANRKTATQMLSEACGKPYDEVLEDSSRTFYMSPDDAVEYGLIDKVL 292
>gi|209527270|ref|ZP_03275781.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|376003779|ref|ZP_09781582.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423066151|ref|ZP_17054941.1| hypothetical protein SPLC1_S410490 [Arthrospira platensis C1]
gi|209492337|gb|EDZ92681.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|375327810|emb|CCE17335.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406712193|gb|EKD07382.1| hypothetical protein SPLC1_S410490 [Arthrospira platensis C1]
Length = 230
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 128/189 (67%), Gaps = 11/189 (5%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RI+Y+G PLV + VT+L++A+L+YLQ+ DP+ PIY YINSTGT+ G+++
Sbjct: 34 RIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIYFYINSTGTSWYTGDAI 93
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G ++E FAI DT+ +K VHT+ +G A+G A ++L+AGTKG R +PHA I++ QPR+
Sbjct: 94 GQDTEAFAICDTMSYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQPRM- 152
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G A+D+ IRAKE + N+ +++ +L+++TG E + K R +++ AKE+G+I
Sbjct: 153 GMGRSQATDIQIRAKEVLANKASILDILSQNTGQPVEKIAKDTDRMFYLTPEAAKEYGLI 212
Query: 291 DKVLWRGQE 299
D+VL +E
Sbjct: 213 DRVLESTKE 221
>gi|357444423|ref|XP_003592489.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355481537|gb|AES62740.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 373
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 127/186 (68%), Gaps = 3/186 (1%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPSLLL RI Y+GMP+VPAVTEL++A+LM+L + +P P+Y+YINS+GT + E+
Sbjct: 153 PPDLPSLLLDSRICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGTQNEKNET 212
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
VG E++ ++I D + +K +V+TV + A G A ++L+ G KG R ++PH+ + P++
Sbjct: 213 VGSETDAYSIADMISHIKSDVYTVNLAMAYGQAAMILSLGKKGYRAVLPHSSAKVFLPKV 272
Query: 230 P-SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
SSG +D+ I+AKE N + ++LLAK TG S+E + K ++R + + A E+G
Sbjct: 273 HRSSG--SVADMWIKAKELEANSEYYIELLAKGTGKSKEEIAKDVQRTRYFQPQDAIEYG 330
Query: 289 VIDKVL 294
+ DK++
Sbjct: 331 LADKIM 336
>gi|224009932|ref|XP_002293924.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
gi|220970596|gb|EED88933.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
Length = 225
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
H RIVYIGMPLVPAVTELV+AEL+YL + D P+ +YINS+GTT +G++VG E+E FA
Sbjct: 35 HNRIVYIGMPLVPAVTELVIAELLYLNYEDQSKPVTMYINSSGTTTANGQAVGFETEAFA 94
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
I D + ++ V+TVA+G A G A ++L+ G KG R +P+A I + QPR + G AS
Sbjct: 95 IADVMKYIRPPVNTVAIGQAFGAAAMILSQGRKGGRAALPNATIRLNQPRSQARG--QAS 152
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQ 298
D+ I+A+E NR T L+A+ TG V +R ++ A E+G+IDKV+ R +
Sbjct: 153 DIAIKAREVAHNRKTTCDLIAQATGKPLSVVMNDCQRVKYLQPDEAVEYGLIDKVI-RSE 211
Query: 299 E 299
E
Sbjct: 212 E 212
>gi|88809169|ref|ZP_01124678.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787111|gb|EAR18269.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 223
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 126/184 (68%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ DP PIY YINSTGTT G+++
Sbjct: 29 RIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDDPDKPIYFYINSTGTTWYTGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +PH+ I++ QPR
Sbjct: 89 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ ++++LA +TG S E ++K R ++ +AK++G+I
Sbjct: 149 ARG--QATDIQIRAKEVLHNKRAMLEILAANTGRSVEELSKDSDRMSYLTPDQAKDYGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|219113429|ref|XP_002186298.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583148|gb|ACI65768.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 116/176 (65%), Gaps = 2/176 (1%)
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
H RIVYIGMPLVPAVTELV+AEL+YL + PI +YINS+GT+ +G++VG E+E FA
Sbjct: 11 HNRIVYIGMPLVPAVTELVIAELLYLNYESTTEPITMYINSSGTSTANGQAVGFETEAFA 70
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
I D + ++ VHTVA+G A G A +LL+ G +G RF +P+A I++ QP+ + G AS
Sbjct: 71 IADVMKYVRPPVHTVALGQAFGAAAMLLSQGKRGSRFALPNATILLNQPKSQARG--QAS 128
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
D+ I+A+E NR T +L+A G E V + R ++ A E+G+ID V+
Sbjct: 129 DIAIKAREVAHNRRTTCELIASACGKPVETVMEDCSRVKYLQPHEAVEYGLIDAVV 184
>gi|428778680|ref|YP_007170466.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
gi|428692959|gb|AFZ49109.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
Length = 228
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 129/189 (68%), Gaps = 12/189 (6%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PLV VTEL++A+L+YLQ+ D + PIY+YINSTGT+ GES+
Sbjct: 33 RIVYLGLPLVSPDEYKEQIGIDVTELIIAQLLYLQFEDREKPIYMYINSTGTSWYGGESI 92
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL ++ V+T+ +G A+G A ++L++GTKG R +P+A I++ QPR
Sbjct: 93 GFETEAFAICDTLNYIEPPVNTICIGQAMGTAAMILSSGTKGYRASLPNATIILNQPRQG 152
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ +++ +L+++TG E + K R +++ + AKE+G+I
Sbjct: 153 AQG--QATDIQIRAKEVLENKQSMLSILSRNTGQPVEKIAKDSDRMFYLSPQEAKEYGLI 210
Query: 291 DKVLWRGQE 299
D+VL +E
Sbjct: 211 DRVLESTKE 219
>gi|443310465|ref|ZP_21040116.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
gi|442779503|gb|ELR89745.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
Length = 228
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 125/186 (67%), Gaps = 15/186 (8%)
Query: 121 RIVYIGMPLVP----------AVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PLV VTEL++A+L+YLQ+ DP+ PIY+YINSTGT+ G+++
Sbjct: 32 RIVYLGLPLVTPDEYKQQLGVDVTELIIAQLLYLQYDDPEKPIYIYINSTGTSWYGGDAI 91
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQP--R 228
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG R +P+A I++ Q R
Sbjct: 92 GAETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAGTKGFRASLPNATIVLHQARRR 151
Query: 229 LPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
P S A+D+ I AKE VN++ ++ +L +TG + + K + R Y+M +AKE+G
Sbjct: 152 APYS---QATDIQIHAKEVFVNKEIILDILTANTGQEKTKIAKDMDRMYYMTPHQAKEYG 208
Query: 289 VIDKVL 294
+IDKVL
Sbjct: 209 LIDKVL 214
>gi|318040431|ref|ZP_07972387.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CB0101]
Length = 233
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 127/184 (69%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ +P+ PI+ YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWYSGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L+AGTKG R +PHA I++ QPR
Sbjct: 89 GFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGHRAALPHASIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ IRAKE + N+ T++++L+ +TG S E ++K R ++ + +A E+G+I
Sbjct: 149 ARG--QASDIQIRAKEVLHNKQTMLEMLSANTGRSVEQLSKDSDRMTYLTAHQAVEYGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|159903902|ref|YP_001551246.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9211]
gi|159889078|gb|ABX09292.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 223
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 128/184 (69%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL+VA+L+YL++ +P P+Y YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIVAQLLYLEFDNPDKPVYFYINSTGTSWYTGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L+AGTKG+R +PH+ I++ QPR
Sbjct: 89 GFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ +++++L+K+TG S E ++K R +++ +A E+G+I
Sbjct: 149 AQG--QATDIQIRAKEVIHNKQSMLEILSKNTGRSVEELSKDSDRMSYLNPNQAVEYGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|88770682|gb|ABD51944.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodomonas
salina]
Length = 262
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 116/176 (65%), Gaps = 2/176 (1%)
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
+ RIVY+GMPLVPAVTEL+VAE +YLQ+ + + P+++Y+NSTGT+ DG S G E+E FA
Sbjct: 72 NNRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVFMYLNSTGTSNPDGSSAGFETEAFA 131
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
I DT+ +K VHT+ VG A G +LL++G R +P+A IMI QP + G AS
Sbjct: 132 IADTMNYVKPPVHTICVGQAFGTCVMLLSSGEPTHRAALPNATIMIHQPTARAKG--QAS 189
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
D+ I+A+E + NR +++A+ +G E V K R ++ A E+G+IDK+L
Sbjct: 190 DIAIKAREVLYNRKQCFEIIAETSGQPLEKVMKDASRTKYLTPAEAVEYGIIDKIL 245
>gi|33862588|ref|NP_894148.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9313]
gi|124023702|ref|YP_001018009.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9303]
gi|33634504|emb|CAE20490.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
gi|123963988|gb|ABM78744.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 223
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 126/189 (66%), Gaps = 12/189 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ +P+ PIY YINSTGT+ G++V
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAV 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG R +PHA I++ QPR
Sbjct: 89 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGHRAALPHASIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ ++K+LA +TG S E ++K R ++ A E+G+I
Sbjct: 149 AQG--QATDIQIRAKEVLHNKQAMLKILASNTGRSIEQLSKDSDRMSYLTPGDAVEYGII 206
Query: 291 DKVLWRGQE 299
D++L +E
Sbjct: 207 DRILSSRKE 215
>gi|116072310|ref|ZP_01469577.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116064832|gb|EAU70591.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 222
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 125/184 (67%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L++L++ DP+ PIY YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +PH+ I++ QPR
Sbjct: 89 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ ++++L+ +TG + E ++K R ++ A EFG+I
Sbjct: 149 AQG--QATDIQIRAKEVLHNKQAMLEILSNNTGRTVEELSKNSDRMSYLTPHEAVEFGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|78185115|ref|YP_377550.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9902]
gi|78169409|gb|ABB26506.1| Endopeptidase Clp [Synechococcus sp. CC9902]
Length = 223
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 125/184 (67%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L++L++ DP+ PIY YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +PH+ I++ QPR
Sbjct: 89 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ ++++L+ +TG + E ++K R ++ A EFG+I
Sbjct: 149 AQG--QATDIQIRAKEVLHNKQAMLEILSNNTGRTVEELSKNSDRMSYLTPHEAVEFGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|412990638|emb|CCO18010.1| predicted protein [Bathycoccus prasinos]
Length = 386
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 122/192 (63%), Gaps = 5/192 (2%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD--- 166
PPDLPSLLL+ RI YIGM LVPAVTELVVAEL+YL + + P YLYI+S G+ D
Sbjct: 160 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPAYLYIHSAGSMGKDKDG 219
Query: 167 -GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQ 225
E VG+++E +AI DT+ +K ++HTVAVG G A L+LAAG KG R+ +P+A+I
Sbjct: 220 RDEVVGVDNEAYAIIDTMRYIKPKIHTVAVGKTYGNAALILAAGDKGCRWALPNAQIATA 279
Query: 226 QPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAK 285
PRL + ++DV +RA E V + + TG +E + K + R + +A
Sbjct: 280 PPRL-NRMFNTSTDVQVRANEVDVCENYYFGFMQAFTGKDKETIAKDMSRTKYFTPEKAI 338
Query: 286 EFGVIDKVLWRG 297
E+G++DK++ +G
Sbjct: 339 EYGLVDKIISKG 350
>gi|260766931|gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]
Length = 305
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D PIYLYINSTGTT+
Sbjct: 99 EQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDTKPIYLYINSTGTTK-G 157
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G E+E FAIYD + +K + T+ VG A G A LLLAAG KG R +P + IM++Q
Sbjct: 158 GEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMMKQ 217
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+D+ + +E +D LVKL AKH G S E + IRRP + A E
Sbjct: 218 PIARFQG--QATDIELARREVRNVKDELVKLFAKHVGKSTEQIEADIRRPKYFSPSEAVE 275
Query: 287 FGVIDKVLWRGQET 300
+G+IDKVL+ + T
Sbjct: 276 YGIIDKVLYNERST 289
>gi|148240099|ref|YP_001225486.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH 7803]
gi|147848638|emb|CAK24189.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 223
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 126/184 (68%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ +P PIY YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDNPDKPIYFYINSTGTSWYTGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +PHA I++ QPR
Sbjct: 89 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA+E + N+ ++++L+ +TG S E ++K R ++ +AKE+G+I
Sbjct: 149 ARG--QATDIQIRAQEVLHNKRAMLEILSTNTGRSVEELSKDSDRMSYLTPEQAKEYGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|291569212|dbj|BAI91484.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 230
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 146/222 (65%), Gaps = 12/222 (5%)
Query: 89 MASPAQVERSASYNEHRP-DTPPPDLPSLLLHGRIVYIGMPLVPA----------VTELV 137
M+S +S Y P TPPPDLPSLLL RI+Y+G PLV + VT+L+
Sbjct: 1 MSSSVYTVQSPYYYSDSPIRTPPPDLPSLLLKERIIYLGSPLVSSDEYKRQLGVDVTKLI 60
Query: 138 VAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGA 197
+A+L+YLQ+ DP+ PI+ YINSTGT+ G+++G ++E FAI DT+ +K VHT+ +G
Sbjct: 61 IAQLLYLQFSDPEKPIFFYINSTGTSWYTGDAIGQDTEAFAICDTINYVKPPVHTICIGQ 120
Query: 198 AIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKL 257
A+G A ++L+AGTKG R +PHA I++ QPR+ G A+D+ IRAKE + N+ +++ +
Sbjct: 121 AMGTAAMILSAGTKGCRTSLPHATIVLNQPRM-GMGRSQATDIQIRAKEVLANKASILGI 179
Query: 258 LAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
L+K+TG E + K R +++ AKE+G+ID+VL +E
Sbjct: 180 LSKNTGQPVEKIAKDTDRMFYLTPEAAKEYGLIDRVLESTKE 221
>gi|443315110|ref|ZP_21044620.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785292|gb|ELR95122.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 230
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 124/184 (67%), Gaps = 11/184 (5%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RI+Y+G+PLV A VT+L++A+L++LQ+ DP PIY YINSTGT+ G+++
Sbjct: 34 RIIYLGLPLVSADEYKRQLGVDVTKLIIAQLLFLQFDDPDKPIYFYINSTGTSWYTGDAI 93
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K +HT+ +G A+G A ++LA+GTKG R +PHA I++ Q R+
Sbjct: 94 GQETEAFAICDTMGYVKPPIHTICIGQAMGTAAMILASGTKGFRASLPHATIVLNQARV- 152
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G A+D+ IRAKE + N+ ++ +LAK+TG + + K R +++ AKE+G+I
Sbjct: 153 GMGRSQATDIQIRAKEVLENKAAMLDILAKNTGKTPAQIAKDTDRMFYLTPPEAKEYGLI 212
Query: 291 DKVL 294
D+VL
Sbjct: 213 DRVL 216
>gi|414079204|ref|YP_007000628.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972483|gb|AFW96571.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 220
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 126/183 (68%), Gaps = 12/183 (6%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVP+VTEL+VA+L+YLQ DP+ PI +YINSTGT+ GE +G E+E FAIY
Sbjct: 34 RIVYLGMPLVPSVTELIVAQLLYLQSDDPEKPIKIYINSTGTSGYSGEPIGFETEAFAIY 93
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGL-----L 235
DT+ +K +HT+ +G+A+GMA ++L+AGTKG R +P++ I++ QP+ + G +
Sbjct: 94 DTMKYIKPPIHTICIGSAMGMAAMILSAGTKGCRASLPNSSIILHQPKSYAQGQATDIQI 153
Query: 236 PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLW 295
A +VL N+ +++++LA+ T ++K + R ++M +AKE+G+ID+V
Sbjct: 154 RAKEVL-------ANKASMLEILARTTEQDMTKISKDMDRLFYMTPDQAKEYGLIDRVFR 206
Query: 296 RGQ 298
+ +
Sbjct: 207 KDE 209
>gi|384252076|gb|EIE25553.1| hypothetical protein COCSUDRAFT_46762 [Coccomyxa subellipsoidea
C-169]
Length = 216
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDLPS L RIVY+GM LVPAVTEL++AEL+YLQ+ +P PI++YINS G + G+
Sbjct: 13 PPDLPSYLFKERIVYLGMSLVPAVTELLLAELLYLQYDNPTRPIFMYINSAGVQK-GGDK 71
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
+G ESE FAIYDT+ +K EVHT+ VG A G + +LLAAGT GKR +P + IM++QP +
Sbjct: 72 LGYESEAFAIYDTMKYIKPEVHTLCVGNAFGESAMLLAAGTPGKRGALPSSTIMLRQP-M 130
Query: 230 PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGV 289
+ ASD+ I E ++ +V LL KH G + + + I RP + + A +FG+
Sbjct: 131 QRFAQMQASDIDIYRNELRKTKNEIVHLLGKHIGKDADEIERVIARPTYFNPYEAVDFGI 190
Query: 290 IDKVLWRGQETI 301
ID VL +E I
Sbjct: 191 IDSVLEPNEEVI 202
>gi|56751581|ref|YP_172282.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 6301]
gi|81301347|ref|YP_401555.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 7942]
gi|18203214|sp|Q9L4P4.1|CLPR_SYNE7 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|7264063|emb|CAB81780.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686540|dbj|BAD79762.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170228|gb|ABB58568.1| Endopeptidase Clp [Synechococcus elongatus PCC 7942]
Length = 228
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 123/184 (66%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RI+Y+GMPL + VTEL++A+L+YL++ +P+ PIY YINSTGT+ G+++
Sbjct: 33 RIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAI 92
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L+ GT G R +PHA I++ QPR
Sbjct: 93 GYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPRTG 152
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ IRAKE + N+ T++++ A++TG + + + R +M +A E+G+I
Sbjct: 153 AQG--QASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLI 210
Query: 291 DKVL 294
D+VL
Sbjct: 211 DRVL 214
>gi|148910727|gb|ABR18430.1| unknown [Picea sitchensis]
Length = 393
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 123/188 (65%), Gaps = 3/188 (1%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDG 167
+ PPDLPSLLL RI+Y+GMP+VPAVTEL++AELM+L + +P PIY YINS GT +
Sbjct: 169 SAPPDLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGTQNEKH 228
Query: 168 ESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQP 227
E + E+E +AI D + +K +V+T+ G A G A +LL+ GTKG R +MP + + P
Sbjct: 229 EPIAFETEAYAIADMIAYVKPKVYTLNCGMAFGQAGMLLSLGTKGHRALMPSSTTKLHLP 288
Query: 228 RL-PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
+ SSG + D+ I+AKE N + ++LLAK G ++E + K I+R + + A +
Sbjct: 289 VVNKSSG--SSIDMWIKAKELEANTEYYIELLAKGIGKTKEEIAKDIQRSRYFFPQEAND 346
Query: 287 FGVIDKVL 294
+G+ DK+L
Sbjct: 347 YGIADKIL 354
>gi|78212385|ref|YP_381164.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9605]
gi|78196844|gb|ABB34609.1| Endopeptidase Clp [Synechococcus sp. CC9605]
Length = 225
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 127/184 (69%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ +P+ PIY YINSTGT+ GE++
Sbjct: 32 RIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYSGEAI 91
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +P++ I++ QPR
Sbjct: 92 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPNSSIVLHQPRSG 151
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ ++++L+ +TG S E ++K R ++ ++A E+G+I
Sbjct: 152 ARG--QATDIQIRAKEVLHNKQAMLEILSTNTGRSVEELSKDSDRMSYLTPQQAVEYGLI 209
Query: 291 DKVL 294
D+VL
Sbjct: 210 DRVL 213
>gi|108708098|gb|ABF95893.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
Length = 230
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 122/169 (72%), Gaps = 17/169 (10%)
Query: 34 CSAKIPNPMPAHINPN-DPFLSKLAAAAAASPEAF-----VNRPSNSGTLPYLDIYDSPT 87
S PNP+ NP DPFLS LAAA SPE LP+L+I+ +
Sbjct: 51 ASGGSPNPL---FNPRADPFLSTLAAA---SPEELQAAAAGGGRRGDDHLPFLEIFQNAK 104
Query: 88 LMASPAQVERSAS-YNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQW 146
LMASPAQVERS+S Y++HRP PPPDLPSLLLHGRIVYIGMPLVPAVTELVVA+LMYL+W
Sbjct: 105 LMASPAQVERSSSSYSQHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAQLMYLEW 164
Query: 147 MDPKAPIYLYIN--STGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTV 193
M+ K P+Y+YIN GT RDDGE VGMESEGFAIYD +M+MK EVH +
Sbjct: 165 MNSKEPVYIYINST--GTARDDGEPVGMESEGFAIYDAMMRMKTEVHIL 211
>gi|33866182|ref|NP_897741.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH 8102]
gi|33639157|emb|CAE08163.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
WH 8102]
Length = 222
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 128/189 (67%), Gaps = 12/189 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L++L++ +P+ PIY YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDNPEKPIYFYINSTGTSWYSGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +PH+ I++ QPR
Sbjct: 89 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ ++++L+ +TG S E ++K R ++ +A E+G+I
Sbjct: 149 AQG--QATDIQIRAKEVLHNKQAMLEILSTNTGRSVEELSKDSDRMSYLTPAQAVEYGLI 206
Query: 291 DKVLWRGQE 299
D+VL +E
Sbjct: 207 DRVLSSRKE 215
>gi|260434315|ref|ZP_05788285.1| Clp protease [Synechococcus sp. WH 8109]
gi|260412189|gb|EEX05485.1| Clp protease [Synechococcus sp. WH 8109]
Length = 225
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 126/184 (68%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ +P+ PIY YINSTGT+ G+++
Sbjct: 32 RIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYSGDAI 91
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +PH+ I++ QPR
Sbjct: 92 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPRSG 151
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRAKE + N+ ++++L+ +TG S E ++ R ++ ++A E+G+I
Sbjct: 152 ARG--QATDIQIRAKEVLHNKQAMLEILSTNTGRSVEDLSNDSDRMSYLTPQQAVEYGLI 209
Query: 291 DKVL 294
D+VL
Sbjct: 210 DRVL 213
>gi|427702648|ref|YP_007045870.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
gi|427345816|gb|AFY28529.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
Length = 223
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 127/184 (69%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTELV+A+L+YL++ +P+ PI+ YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQMGIDVTELVIAQLLYLEFDNPEKPIFFYINSTGTSWYSGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +PHA I++ QPR
Sbjct: 89 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAMILSAGTKGQRAALPHASIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ IRAKE + N+ +++++L+++TG S + +++ R ++ + A +G+I
Sbjct: 149 ARG--QASDIQIRAKEVLHNKHSMLEILSENTGKSIDELSRDSDRMTYLTAEEAMAYGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|449459004|ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Cucumis sativus]
gi|449510487|ref|XP_004163680.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Cucumis sativus]
Length = 304
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D PIYLY+NSTGTT+
Sbjct: 99 EQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTK-G 157
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G E+E FA+YD + +K + T+ VG A G A LLLAAG G R +P + IMI++
Sbjct: 158 GEKLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKE 217
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+DV I KE + LVKL AKH G S E + IRRP + A E
Sbjct: 218 PIARFQG--QATDVEIARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVE 275
Query: 287 FGVIDKVLWRGQET 300
+G+IDKVL+ + T
Sbjct: 276 YGIIDKVLYNERAT 289
>gi|148906385|gb|ABR16347.1| unknown [Picea sitchensis]
Length = 393
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 123/188 (65%), Gaps = 3/188 (1%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDG 167
+ PPDLPSLLL RI+Y+GMP+VPAVTEL++AELM+L + +P PIY YINS GT +
Sbjct: 169 SAPPDLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGTQNEKH 228
Query: 168 ESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQP 227
E + E+E +AI D + +K +V+T+ G A G A +LL+ GTKG R +MP + + P
Sbjct: 229 EPIAFETEAYAIADMIAYVKPKVYTLNCGMAFGQAGMLLSLGTKGHRALMPSSTTKLHLP 288
Query: 228 RL-PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
+ SSG + D+ I+AKE N + ++LLAK G ++E + K I+R + + A +
Sbjct: 289 VVNKSSG--SSIDMWIKAKELEANTEYYIELLAKGIGKTKEEIAKDIQRSRYFFPQEAID 346
Query: 287 FGVIDKVL 294
+G+ DK+L
Sbjct: 347 YGIADKIL 354
>gi|302801676|ref|XP_002982594.1| hypothetical protein SELMODRAFT_116719 [Selaginella moellendorffii]
gi|302823376|ref|XP_002993341.1| hypothetical protein SELMODRAFT_136938 [Selaginella moellendorffii]
gi|300138850|gb|EFJ05603.1| hypothetical protein SELMODRAFT_136938 [Selaginella moellendorffii]
gi|300149693|gb|EFJ16347.1| hypothetical protein SELMODRAFT_116719 [Selaginella moellendorffii]
Length = 218
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 127/186 (68%), Gaps = 3/186 (1%)
Query: 109 PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
PPPDLPS L H RIV++GM LVPAVTEL++AE +YLQ++DP+ PIY+YINSTGTT+ DGE
Sbjct: 14 PPPDLPSYLFHNRIVFLGMSLVPAVTELIMAEFLYLQFVDPEKPIYMYINSTGTTK-DGE 72
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPR 228
+G E+E A+YDT+ +K + T+ VG A G A LLLAAG KG R +P IM+++P
Sbjct: 73 KLGYETEALAMYDTMQYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSTTIMLKEPI 132
Query: 229 LPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
G A+D+ I +E + LV+LL +HTG + + + IRRP + A ++G
Sbjct: 133 AQFRG--QATDIDIARREVRNLKKDLVELLERHTGQPADKIEEDIRRPKYFSPDEAVDYG 190
Query: 289 VIDKVL 294
+IDKVL
Sbjct: 191 LIDKVL 196
>gi|422295344|gb|EKU22643.1| atp-dependent clp protease proteolytic subunit [Nannochloropsis
gaditana CCMP526]
Length = 310
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 126/201 (62%), Gaps = 7/201 (3%)
Query: 99 ASYNEHRPDTPP-----PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPI 153
A E+ P T P PDLPSLLLH RIVY+GM LVPAVTEL++AEL+YL + PI
Sbjct: 63 AERQEYAPPTDPRLGPPPDLPSLLLHNRIVYLGMALVPAVTELIIAELLYLNYESQDRPI 122
Query: 154 YLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGK 213
Y+YINS G + DG ++G ++E FAI D + ++ + TV VG G A +LLA GTKG+
Sbjct: 123 YMYINSPGISAPDGRAMGFDTEAFAIADVMSYIRAPIATVCVGQCFGSAAMLLACGTKGQ 182
Query: 214 RFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTI 273
R+ +P+ IM+ QPR S G ASD+ I+A+E M NR ++LAK G + + K
Sbjct: 183 RYSLPNGSIMLHQPRSLSRG--QASDIAIKAREVMRNRRINSEMLAKACGKPLDVIIKDA 240
Query: 274 RRPYHMDSRRAKEFGVIDKVL 294
R + A E+G+ID+VL
Sbjct: 241 SRKRYFSPEEAVEYGLIDQVL 261
>gi|33240836|ref|NP_875778.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33238365|gb|AAQ00431.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 221
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 125/184 (67%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L++L++ +P+ PIY YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNPEKPIYFYINSTGTSWHTGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K +HT+ +G A+G A ++L+ G+KG R +PHA I++ QPR
Sbjct: 89 GFETEAFAICDTISYIKPPIHTICIGQAMGTAAVILSGGSKGHRAALPHASIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+SG A+D+ IRAKE + N+ ++++L+K+TG S ++K R +++ A E+G+I
Sbjct: 149 ASG--QATDIQIRAKEVIHNKQAMLEILSKNTGKSVSQLSKDSDRMSYLNPHEAVEYGLI 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|78779794|ref|YP_397906.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9312]
gi|123969044|ref|YP_001009902.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. AS9601]
gi|78713293|gb|ABB50470.1| Endopeptidase Clp [Prochlorococcus marinus str. MIT 9312]
gi|123199154|gb|ABM70795.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
Length = 220
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 128/184 (69%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ DP+ PIY YINSTGT+ G++V
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGDAV 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L++GTKG+R +PHA I++ QP
Sbjct: 89 GFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGQRAALPHASIVLHQPISG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA+E + N+ +++++L+++TG + E ++K R +++ + A ++GVI
Sbjct: 149 ARG--QATDIQIRAEEVLKNKKSMLEILSRNTGKTIEELSKDSDRMSYLNPQEALDYGVI 206
Query: 291 DKVL 294
D++L
Sbjct: 207 DRIL 210
>gi|434386911|ref|YP_007097522.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
gi|428017901|gb|AFY93995.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
Length = 223
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 119/184 (64%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPAV----------TELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G PLV + T+L++A+L+YLQ+ +P+ PIY YINSTGT+ G+S+
Sbjct: 28 RIVYMGGPLVSSDDYKRQMGYDPTKLLIAQLLYLQFDNPEKPIYFYINSTGTSWYTGDSI 87
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++LAAGTKG R +PHA I++ QPR
Sbjct: 88 GFETEAFAICDTLGYIKPPVHTICIGQAMGTAAMILAAGTKGCRASLPHATIVLNQPRSG 147
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ IRAKE + N+ ++ + + TG E + K R +M AKE+G+I
Sbjct: 148 AQG--QASDIQIRAKEVLDNKTAILDIFSHSTGQPAEKIAKDTDRMLYMTPTEAKEYGLI 205
Query: 291 DKVL 294
D VL
Sbjct: 206 DIVL 209
>gi|33861869|ref|NP_893430.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33640237|emb|CAE19772.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 220
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 126/184 (68%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ DP PIY YINSTGT+ G++V
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTSWYTGDAV 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K +HT+ +G A+G A ++L++GTKG R +PHA I++ QP
Sbjct: 89 GFETEAFAICDTINYIKPPIHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQPISG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA+E + N+ +++++L+++TG S E ++K R +++ + A ++GVI
Sbjct: 149 ARG--QATDIQIRAEEVLKNKKSMLEILSRNTGKSIEELSKDSDRMSYLNPQEALDYGVI 206
Query: 291 DKVL 294
D++L
Sbjct: 207 DRIL 210
>gi|123966707|ref|YP_001011788.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9515]
gi|123201073|gb|ABM72681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 220
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 126/184 (68%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ DP PIY YINSTGT+ G++V
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTSWYTGDAV 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K +HT+ +G A+G A ++L++GTKG R +PHA I++ QP
Sbjct: 89 GFETEAFAICDTINYIKPPIHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQPISG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA+E + N+ +++++L+++TG S E ++K R +++ + A ++GVI
Sbjct: 149 ARG--QATDIQIRAEEVLKNKKSMLEILSRNTGKSIEDLSKDSDRMSYLNPQEALDYGVI 206
Query: 291 DKVL 294
D++L
Sbjct: 207 DRIL 210
>gi|126696837|ref|YP_001091723.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9301]
gi|126543880|gb|ABO18122.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 220
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 127/184 (69%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ DP+ PIY YINSTGT+ G++V
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGDAV 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L++GTKG R +PHA I++ QP
Sbjct: 89 GFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQPISG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA+E + N+ +++++L+++TG + E ++K R +++ + A ++GVI
Sbjct: 149 ARG--QATDIQIRAEEVLKNKKSMLEILSRNTGKTIEELSKDSDRMSYLNPQEALDYGVI 206
Query: 291 DKVL 294
D++L
Sbjct: 207 DRIL 210
>gi|157413875|ref|YP_001484741.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9215]
gi|254526964|ref|ZP_05139016.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
gi|157388450|gb|ABV51155.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|221538388|gb|EEE40841.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
Length = 220
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 128/184 (69%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ DP+ PIY YINSTGT+ G++V
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGDAV 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L++GTKG+R +PHA I++ QP
Sbjct: 89 GFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGQRAALPHASIVLHQPISG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA+E + N+ +++++L+++TG + + ++K R +++ + A ++GVI
Sbjct: 149 ARG--QATDIQIRAEEVLKNKKSMLEILSRNTGKTIDELSKDSDRMSYLNPQEALDYGVI 206
Query: 291 DKVL 294
D++L
Sbjct: 207 DRIL 210
>gi|356563393|ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Glycine max]
Length = 304
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 170/305 (55%), Gaps = 28/305 (9%)
Query: 2 STSF-LQAPMAALVPSTS--VHSLR--SKSTRSLKTFCSAKIPNPMPAHINPNDPFLSKL 56
++SF L PM AL PS+S V +R + ST ++T S P + + PF
Sbjct: 7 ASSFALNKPMLAL-PSSSRTVTPIRCMNTSTSPVRTSLSTSFVAPYAGICSASSPFSGHK 65
Query: 57 AAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSL 116
++ +P +F+ + G + M P Q R +++ + PPPDL S
Sbjct: 66 LRPSSLNPASFLGSNAKRGVV----------TMVIPFQ--RGSAWEQ-----PPPDLASY 108
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RIVY+GM LVP+VTEL++AE +YLQ+ D PIYLYINSTGTT+ GE +G E+E
Sbjct: 109 LYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTK-GGEKLGYETEA 167
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
FAIYD + +K + T+ VG A G A LLLAAG KG R +P + IMI+QP G
Sbjct: 168 FAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQG--Q 225
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLW- 295
A+DV + +E + LVKL AKH + E + I+RP + A E+G+IDKV++
Sbjct: 226 ATDVNLARREVNNVKTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYN 285
Query: 296 -RGQE 299
RG E
Sbjct: 286 DRGTE 290
>gi|115435898|ref|NP_001042707.1| Os01g0271400 [Oryza sativa Japonica Group]
gi|113532238|dbj|BAF04621.1| Os01g0271400 [Oryza sativa Japonica Group]
Length = 298
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 126/187 (67%), Gaps = 3/187 (1%)
Query: 109 PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +GE
Sbjct: 95 PPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTK-NGE 153
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPR 228
+G E+E FAIYD + +K + T+ VG A G A LLLAAG KG R +P + IMI+QP
Sbjct: 154 KLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGNRAALPSSTIMIKQPI 213
Query: 229 LPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
G A+DV I KE + ++KLL++H G S E + + I+RP + A ++G
Sbjct: 214 GRFQG--QATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFSPSEAVDYG 271
Query: 289 VIDKVLW 295
+IDKVL+
Sbjct: 272 IIDKVLY 278
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 116/183 (63%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V LV+A+L++L+ DP +YLYINS G G
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ VG A MA +LLAAGTKGKR+ +P+A+IMI QP +
Sbjct: 77 SVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGTKGKRYALPNARIMIHQPLGGA 136
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G PA DV I +E + +D L ++L+KHTG E + K R + M + AKE+G++D
Sbjct: 137 EG--PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVD 194
Query: 292 KVL 294
KV+
Sbjct: 195 KVV 197
>gi|449438329|ref|XP_004136941.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Cucumis sativus]
Length = 381
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 121/184 (65%), Gaps = 3/184 (1%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DLP+LLL RI+Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS+GT ++ E VG
Sbjct: 158 DLPTLLLDARIIYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTQDENRELVG 217
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL-P 230
E+E +AI D + K +V+T+ + A G A +LL+ GTKG R + P+A + P++
Sbjct: 218 SETEAYAIADMMSYCKSDVYTINLAMAYGQAAMLLSLGTKGYRALQPNASTKLYLPKVNN 277
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SSG A D+ I+AKE N + ++LLAK G +E + K I+ + + A ++G+
Sbjct: 278 SSG--SAIDMWIKAKELDANTEYYLELLAKGIGKPKEEINKDIQLSKYFKPQEAIDYGIA 335
Query: 291 DKVL 294
DK++
Sbjct: 336 DKII 339
>gi|449478766|ref|XP_004155413.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Cucumis sativus]
Length = 381
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 121/184 (65%), Gaps = 3/184 (1%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DLP+LLL RI+Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS+GT ++ E VG
Sbjct: 158 DLPTLLLDARIIYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTQDENRELVG 217
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL-P 230
E+E +AI D + K +V+T+ + A G A +LL+ GTKG R + P+A + P++
Sbjct: 218 SETEAYAIADMMSYCKSDVYTINLAMAYGQAAMLLSLGTKGYRALQPNASTKLYLPKVNN 277
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SSG A D+ I+AKE N + ++LLAK G +E + K I+ + + A ++G+
Sbjct: 278 SSG--SAIDMWIKAKELDANTEYYLELLAKGIGKPKEEINKDIQLSKYFKPQEAIDYGIA 335
Query: 291 DKVL 294
DK++
Sbjct: 336 DKII 339
>gi|72382718|ref|YP_292073.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL2A]
gi|72002568|gb|AAZ58370.1| endopeptidase Clp [Prochlorococcus marinus str. NATL2A]
Length = 224
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 124/184 (67%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L++L++ + + PIY YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTSWYTGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +PHA I++ QPR
Sbjct: 89 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA E + N+ ++++L+ +TG S + ++K R +++ A ++G+I
Sbjct: 149 AQG--QATDIQIRANEVIHNKKAMLEILSHNTGRSVDQLSKDSDRMSYLNPHEAVDYGII 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|87302966|ref|ZP_01085770.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282462|gb|EAQ74421.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 224
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 124/184 (67%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VT+L++A+L++L++ +P+ PI+ YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQMGIDVTQLIIAQLLFLEFDNPEKPIFFYINSTGTSWYSGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L+AG KG R +PHA I++ QPR
Sbjct: 89 GFETEAFAICDTIRYVKPPVHTICIGQAMGTAAMILSAGAKGHRAALPHASIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G ASD+ IRA+E + N+ ++++L+ +TG S E ++K R ++ R A E+G+I
Sbjct: 149 ARG--QASDIQIRAQEVLHNKRVMLEMLSHNTGRSVEQLSKDSDRMTYLTPREALEYGLI 206
Query: 291 DKVL 294
D++L
Sbjct: 207 DRIL 210
>gi|124026439|ref|YP_001015554.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL1A]
gi|123961507|gb|ABM76290.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 224
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 124/184 (67%), Gaps = 12/184 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L++L++ + + PIY YINSTGT+ G+++
Sbjct: 29 RIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTSWYTGDAI 88
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DTL +K VHT+ +G A+G A ++L+AGTKG+R +PHA I++ QPR
Sbjct: 89 GFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQPRSG 148
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA E + N+ ++++L+ +TG S + ++K R +++ A ++G+I
Sbjct: 149 AQG--QATDIQIRANEVIHNKKAMLEILSHNTGRSVDQLSKDSDRMSYLNPHEAVDYGII 206
Query: 291 DKVL 294
D+VL
Sbjct: 207 DRVL 210
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|418045135|ref|ZP_12683231.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|6685314|sp|Q9WZF9.1|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91.1|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812.1|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|351678217|gb|EHA61364.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
Length = 203
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 115/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V LV+A+L++L+ DP +YLYINS G G
Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP +
Sbjct: 79 SVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGA 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G PA DV I +E + +D L ++L+KHTG E + K R + M + AKE+G++D
Sbjct: 139 EG--PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVD 196
Query: 292 KVL 294
KV+
Sbjct: 197 KVV 199
>gi|403252433|ref|ZP_10918743.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
gi|402812446|gb|EJX26925.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
Length = 201
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 115/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V LV+A+L++L+ DP +YLYINS G G
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP +
Sbjct: 77 SVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGA 136
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G PA DV I +E + +D L ++L+KHTG E + K R + M + AKE+G++D
Sbjct: 137 EG--PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVD 194
Query: 292 KVL 294
KV+
Sbjct: 195 KVV 197
>gi|359807363|ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycine max]
gi|255635880|gb|ACU18287.1| unknown [Glycine max]
Length = 304
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 165/301 (54%), Gaps = 29/301 (9%)
Query: 6 LQAPMAALVPSTS-----VHSLRSKSTRSLKTFCSAKIPNPMPAHINPNDPFLSKLAAAA 60
L PM AL PS+S + ++ S ST S++T S+ P + F +
Sbjct: 12 LNKPMLAL-PSSSRTATPIRAMNS-STSSVRTSLSSNFVAPYTGINSAYSLFSGHKLRLS 69
Query: 61 AASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHG 120
+ +P +F S G + M P Q R +++ + PPPDL S L
Sbjct: 70 SLNPGSFRGSNSKRGVV----------TMVIPFQ--RGSAWEQ-----PPPDLASYLYKN 112
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GM LVP+VTEL++AE +YLQ+ D PIYLYINSTGTT+ GE +G E+E FAIY
Sbjct: 113 RIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTK-GGEKLGYETEAFAIY 171
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
D + +K + T+ VG A G A LLLAAG KG R +P + IMI+QP G A+DV
Sbjct: 172 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQG--QATDV 229
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLW--RGQ 298
+ +E + LVKL AKH + E + I+RP + A E+G+IDKV++ RG
Sbjct: 230 NLARREVNNVKTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGS 289
Query: 299 E 299
E
Sbjct: 290 E 290
>gi|195650193|gb|ACG44564.1| endopeptidase Clp [Zea mays]
Length = 388
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 121/184 (65%), Gaps = 1/184 (0%)
Query: 111 PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
PDLPSLLL RI+++GMP+VPAVTEL+ A+ ++L + D PIYLYINSTGT ++ E V
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 222
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
E++ +AI D + + K +V+T+ + A G A +LL+ G KGKR ++P++ + P++
Sbjct: 223 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVH 282
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SG A D+ I+AKE N D ++LL+K G +E + + +R P + ++ A ++G+
Sbjct: 283 KSG-GAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEALDYGLA 341
Query: 291 DKVL 294
D +L
Sbjct: 342 DTIL 345
>gi|226529349|ref|NP_001141859.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194689706|gb|ACF78937.1| unknown [Zea mays]
gi|413946719|gb|AFW79368.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 388
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 121/184 (65%), Gaps = 1/184 (0%)
Query: 111 PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
PDLPSLLL RI+++GMP+VPAVTEL+ A+ ++L + D PIYLYINSTGT ++ E V
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 222
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
E++ +AI D + + K +V+T+ + A G A +LL+ G KGKR ++P++ + P++
Sbjct: 223 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVH 282
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SG A D+ I+AKE N D ++LL+K G +E + + +R P + ++ A ++G+
Sbjct: 283 KSG-GAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEALDYGLA 341
Query: 291 DKVL 294
D +L
Sbjct: 342 DTIL 345
>gi|182414555|ref|YP_001819621.1| endopeptidase Clp [Opitutus terrae PB90-1]
gi|177841769|gb|ACB76021.1| Endopeptidase Clp [Opitutus terrae PB90-1]
Length = 206
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 120/188 (63%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V LV+A++ +LQ DPK I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGSPIDDTVANLVIAQMFFLQMEDPKKDIQLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C++ T VG A M+ +LL+AGTKGKRF +P++++MI QP +
Sbjct: 71 VVTGGMAIYDTMNFLQCDIVTYCVGMAASMSTVLLSAGTKGKRFALPNSRVMIHQPSGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + R TL +++AKHTG + E V K R Y+M ++ AK++G++D
Sbjct: 131 GG--QAADIAIAAKEILRWRKTLNEVIAKHTGKTPEQVEKDSDRDYYMSAQEAKDYGIVD 188
Query: 292 KVLWRGQE 299
V+ +E
Sbjct: 189 HVVESTRE 196
>gi|194706198|gb|ACF87183.1| unknown [Zea mays]
Length = 301
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 121/184 (65%), Gaps = 1/184 (0%)
Query: 111 PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
PDLPSLLL RI+++GMP+VPAVTEL+ A+ ++L + D PIYLYINSTGT ++ E V
Sbjct: 76 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 135
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
E++ +AI D + + K +V+T+ + A G A +LL+ G KGKR ++P++ + P++
Sbjct: 136 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVH 195
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SG A D+ I+AKE N D ++LL+K G +E + + +R P + ++ A ++G+
Sbjct: 196 KSG-GAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEALDYGLA 254
Query: 291 DKVL 294
D +L
Sbjct: 255 DTIL 258
>gi|242052591|ref|XP_002455441.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
gi|241927416|gb|EES00561.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
Length = 291
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 125/189 (66%), Gaps = 3/189 (1%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +
Sbjct: 86 EQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTK-N 144
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G E+E A+YD + +K + T+ VG A G A LLLAAG KG R +P + IMI+Q
Sbjct: 145 GEKLGYETEALAVYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGNRAALPSSTIMIKQ 204
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+DV I KE + +VKLLA+H G E + + IRRP + A +
Sbjct: 205 PIGRFQG--QATDVDIARKEIRNVKIEMVKLLARHIGKPIEEIARDIRRPKYFSPSEAVD 262
Query: 287 FGVIDKVLW 295
+G+IDKV++
Sbjct: 263 YGIIDKVIY 271
>gi|225164221|ref|ZP_03726495.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
gi|224801160|gb|EEG19482.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
Length = 222
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 119/183 (65%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V +V+A+L++LQ DPK I+LYINS G G
Sbjct: 36 DIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFLQMEDPKKDIHLYINSPG---------G 86
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C+V T VG A MA +LL+AGTKGKRF +P++++MI QP +
Sbjct: 87 VVTGGMAIYDTINFLQCDVVTYCVGQAASMATVLLSAGTKGKRFALPNSRVMIHQPSGGA 146
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + R TL + +A+HTG + E V K R Y++ ++ AK++G++D
Sbjct: 147 GG--QAADITIAAKEILRWRRTLSETIARHTGKTPEQVDKDSDRDYYLSAQEAKDYGLVD 204
Query: 292 KVL 294
V+
Sbjct: 205 HVV 207
>gi|254446451|ref|ZP_05059927.1| Clp protease [Verrucomicrobiae bacterium DG1235]
gi|198260759|gb|EDY85067.1| Clp protease [Verrucomicrobiae bacterium DG1235]
Length = 182
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 113/182 (62%), Gaps = 11/182 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ + ++A+L++LQ DPK I +YINS G G
Sbjct: 2 DIYSRLLKDRIVFIGTPINDEIANAIIAQLLFLQMEDPKKDINVYINSPG---------G 52
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + CEV T +G A M +LLA GTKGKR+ +P++++MI QP +
Sbjct: 53 SVTSGMAIYDTMNFLSCEVSTWCIGMAASMGTILLAGGTKGKRYALPNSRVMIHQPSGGA 112
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + R+TL K+LA+ TG S E + K R Y M S+ A E+GVID
Sbjct: 113 GG--QASDISIQAKEIIRWRETLNKVLAEKTGQSVERIQKDSDRDYWMTSQEALEYGVID 170
Query: 292 KV 293
KV
Sbjct: 171 KV 172
>gi|226531596|ref|NP_001140352.1| uncharacterized protein LOC100272400 [Zea mays]
gi|194699128|gb|ACF83648.1| unknown [Zea mays]
gi|414876902|tpg|DAA54033.1| TPA: ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 289
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 125/189 (66%), Gaps = 3/189 (1%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIY+YINSTGTT+ +
Sbjct: 84 EQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYMYINSTGTTK-N 142
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G E+E A+YD + +K + T+ VG A G A LLLAAG KG R +P + IMI+Q
Sbjct: 143 GEKLGYETEALAVYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGNRAALPSSTIMIKQ 202
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+DV I KE + +VKLLA+H G E + + IRRP + A +
Sbjct: 203 PIGRFQG--QATDVDIARKEIRNVKIEMVKLLARHIGKPMEEIARDIRRPKYFSPSEAVD 260
Query: 287 FGVIDKVLW 295
+G+IDKV++
Sbjct: 261 YGIIDKVIY 269
>gi|357130629|ref|XP_003566950.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like isoform 1 [Brachypodium
distachyon]
gi|357130631|ref|XP_003566951.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like isoform 2 [Brachypodium
distachyon]
Length = 293
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 126/191 (65%), Gaps = 3/191 (1%)
Query: 104 HRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTT 163
H + PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIY+YINSTGTT
Sbjct: 86 HAFEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYEDAEKPIYMYINSTGTT 145
Query: 164 RDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIM 223
+ +GE +G E+E FA+YD + +K + T+ +G A G A LLLAAG KG R +P + IM
Sbjct: 146 K-NGEKLGYETEAFAVYDAMRYVKIPIFTLCIGNAWGEAALLLAAGAKGNRAALPSSTIM 204
Query: 224 IQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
++QP G A+DV I KE + +VKLL++H G + + + IRRP +
Sbjct: 205 MKQPIGRFQG--QATDVDIARKEIRNVKIEMVKLLSRHIGKPMDEIARDIRRPKYFSPSE 262
Query: 284 AKEFGVIDKVL 294
A ++G+IDKVL
Sbjct: 263 AVDYGIIDKVL 273
>gi|148241695|ref|YP_001226852.1| ATP-dependent Clp protease-like protein [Synechococcus sp. RCC307]
gi|147850005|emb|CAK27499.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 224
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 126/189 (66%), Gaps = 12/189 (6%)
Query: 121 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
RIVY+G+PL VTEL++A+L+YL++ +P PI+ YINSTGT+ G+++
Sbjct: 33 RIVYLGLPLFSDDDAKRQMGVDVTELIIAQLLYLEFDNPDKPIFFYINSTGTSWYSGDAI 92
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
G E+E FAI DT+ +K VHT+ +G A+G A ++L+AG KG+R +P+A I++ QPR
Sbjct: 93 GFETEAFAICDTIRYVKPPVHTICIGQAMGTAAMILSAGAKGQRASLPNASIVLHQPRSG 152
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+ G A+D+ IRA+E + N+ T++ +L+++TG + E +T R ++ +A ++G+I
Sbjct: 153 ARG--QATDIQIRAQEVLHNKRTMLSMLSENTGRTVEQLTADSDRMTYLTPDQAMDYGLI 210
Query: 291 DKVLWRGQE 299
D+VL +E
Sbjct: 211 DRVLSSRKE 219
>gi|326495296|dbj|BAJ85744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 125/188 (66%), Gaps = 3/188 (1%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIY+YINSTGTT+ +
Sbjct: 78 EQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYEDAEKPIYMYINSTGTTK-N 136
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G E+E FA+YD + +K + T+ +G A G A LLLAAG KG R +P + IM++Q
Sbjct: 137 GEKLGYETEAFAVYDAMRYVKIPIFTLCIGNAWGEAALLLAAGAKGNRAALPSSTIMMKQ 196
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+DV I KE + +VKLL++H G E + + IRRP + A +
Sbjct: 197 PIGRFQG--QATDVDIARKEIRNVKIEMVKLLSRHIGKPMEEIARDIRRPKYFSPSEAVD 254
Query: 287 FGVIDKVL 294
+G+IDKVL
Sbjct: 255 YGIIDKVL 262
>gi|168701667|ref|ZP_02733944.1| ATP-dependent clp protease proteolytic subunit [Gemmata
obscuriglobus UQM 2246]
Length = 205
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 116/198 (58%), Gaps = 11/198 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + L+VA+++YLQ+ DPK I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFMQGVVQDDMANLIVAQMLYLQFEDPKRDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V T +G A M +LL AGTKGKR+ +PHA++MI QP S
Sbjct: 70 SVTAGMAIYDTMQFITCDVATYCIGQAASMGAMLLTAGTKGKRYALPHARVMIHQPSAGS 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A ++LI AKE + ++TL KL+A H G E + K R M ++ A+EFG+ID
Sbjct: 130 EG--TAEEILIHAKEFLRTKETLNKLMADHCGQPVEKILKGTDRDNFMSAQEAREFGLID 187
Query: 292 KVLWRGQETIMAEVAPPE 309
KVL R A PPE
Sbjct: 188 KVLERMPAEAFAAARPPE 205
>gi|115465787|ref|NP_001056493.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|48475230|gb|AAT44299.1| unknown protein [Oryza sativa Japonica Group]
gi|113580044|dbj|BAF18407.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|215701013|dbj|BAG92437.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632764|gb|EEE64896.1| hypothetical protein OsJ_19755 [Oryza sativa Japonica Group]
Length = 386
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
Query: 104 HRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTT 163
R + PDLPSLLL RI+++GMP+VPAVTEL+ A+ ++L + D PIYLYINSTGT
Sbjct: 154 RRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTM 213
Query: 164 RDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIM 223
++ E V E++ FAI D + + K +V+T+ + A G A +LL+ G KGKR ++P++
Sbjct: 214 DENNELVASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITK 273
Query: 224 IQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
+ P++ SG A D+ I+AKE N D ++LL+K G +E + + ++ P + ++
Sbjct: 274 LYLPKVHKSG-GAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQE 332
Query: 284 AKEFGVIDKVL 294
A ++G+ D +L
Sbjct: 333 AIDYGLADTIL 343
>gi|242091575|ref|XP_002441620.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
gi|241946905|gb|EES20050.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
Length = 388
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 121/184 (65%), Gaps = 1/184 (0%)
Query: 111 PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
PDLPSLLL RI+++GMP+VPAVTEL+ A+ ++L + D PIYLYINSTGT ++ E V
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 222
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
E++ +AI D + + K +V+T+ + A G A +LL+ G KGKR ++P++ + P++
Sbjct: 223 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVH 282
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SG A D+ I+AKE N D ++LL+K G +E + + ++ P + ++ A ++G+
Sbjct: 283 KSG-GAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLA 341
Query: 291 DKVL 294
D +L
Sbjct: 342 DTIL 345
>gi|357040211|ref|ZP_09102000.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355356875|gb|EHG04656.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 197
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 116/189 (61%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ V+ LV+A+L++L+ DP+ I +YINS G G
Sbjct: 20 DIYSRLLKDRIVFIGGPIDDTVSNLVIAQLLFLEAEDPEKDINIYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LLAAG GKRF +P+A+IMI QP
Sbjct: 71 VVTAGMAIYDTMQYVKPDVSTICLGQAASMGSFLLAAGAPGKRFALPYARIMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + +DTL LLAKHTG + V + R + M + AKE+G+ID
Sbjct: 131 QG--QATDIDIHAKEILRMKDTLNDLLAKHTGQPRDKVARDTERDFFMSAEEAKEYGLID 188
Query: 292 KVLWRGQET 300
KV R +++
Sbjct: 189 KVFVRAKQS 197
>gi|357132342|ref|XP_003567789.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Brachypodium distachyon]
Length = 390
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
Query: 104 HRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTT 163
R + PDLPSLLL RI+++GMP+VPAVTEL+ A+ ++L + D PIYLYINSTGT
Sbjct: 158 RRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTM 217
Query: 164 RDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIM 223
++ E V E++ +AI D + + K +V+T+ + A G A +LL+ G KGKR ++P++
Sbjct: 218 DENNELVASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGMKGKRGVLPNSITK 277
Query: 224 IQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
+ P++ SG A D+ I+AKE N D ++LL+K G +E + + +R P + ++
Sbjct: 278 LHLPKVHKSG-GAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQE 336
Query: 284 AKEFGVIDKVL 294
A ++G+ D +L
Sbjct: 337 AIDYGLADTIL 347
>gi|206890175|ref|YP_002248104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226706554|sp|B5YI38.1|CLPP_THEYD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|206742113|gb|ACI21170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 195
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 114/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG + V +V+A+L++LQ DP+ I++YINS G G
Sbjct: 19 DIYSRLLKDRIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
M S G AIYDT+ +K ++ T +G A MAC+LLAAGTKGKRF +PH+++MI QP
Sbjct: 70 MVSSGLAIYDTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVMIHQPIGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+DV I AKE + +D L +LAKHTG E + K R + M + AK +G++D
Sbjct: 130 YG--QATDVEIHAKEILKMKDLLNNILAKHTGQPIEKIQKDTERDFFMSAEEAKLYGIVD 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|326505514|dbj|BAJ95428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 121/184 (65%), Gaps = 1/184 (0%)
Query: 111 PDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESV 170
PDLPSLLL RI+++GMP+VPAVTEL+ A+ ++L + D PIYLYINSTGT ++ E V
Sbjct: 162 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 221
Query: 171 GMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLP 230
E++ +AI D + + K +V+T+ + A G A +LL+ G KGKR ++P++ + P++
Sbjct: 222 ASETDAYAIADFINRSKAKVYTINLSMAYGQAAMLLSLGMKGKRGVLPNSITKLHLPKVH 281
Query: 231 SSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SG A D+ I+AKE N D ++L++K G +E + + +R P + ++ A ++G+
Sbjct: 282 KSG-GAAIDMWIKAKELETNTDYYLELVSKGVGKPKEELAEFLRGPRYFRAQEAIDYGLA 340
Query: 291 DKVL 294
D +L
Sbjct: 341 DTIL 344
>gi|418731097|gb|AFX67013.1| ATP-dependent Clp protease proteolytic subunit [Solanum tuberosum]
Length = 301
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 119/182 (65%), Gaps = 3/182 (1%)
Query: 110 PPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGES 169
PPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D PIYLYINSTGTT+ GE
Sbjct: 100 PPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEDKPIYLYINSTGTTK-GGEK 158
Query: 170 VGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL 229
+G E+E FA+YD + +K + T+ VG A G A LLLAAG KG R +P + IMI+QP
Sbjct: 159 LGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAALLLAAGAKGNRAALPSSTIMIKQPIA 218
Query: 230 PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGV 289
G A+DV + KE + LVKL +K+TG S E + + IRRP + A E+G+
Sbjct: 219 QFQG--QATDVELMRKEVNNVKAELVKLYSKNTGKSPEEIEEDIRRPKYFSPSEAVEYGI 276
Query: 290 ID 291
ID
Sbjct: 277 ID 278
>gi|332296030|ref|YP_004437953.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179133|gb|AEE14822.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
Length = 199
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 121/185 (65%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+++G + V LVVA++++L+ DP IYLYINS G G
Sbjct: 24 DIYSKLLNDRIIFLGTAINEDVANLVVAQMLFLEADDPNRDIYLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V+T+ G A MA ++LAAG +GKR+ +P+++++I QP +
Sbjct: 75 IVTAGLAIYDTMQYVKSPVNTICFGQAASMAAVILAAGERGKRYCLPNSRVLIHQPLGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + +DTL ++LAKHTG + + R ++MD+++AKE+G++D
Sbjct: 135 EG--QATDIAIQAKEILKVKDTLNQILAKHTGKNITKIKNDTERDFYMDAKQAKEYGIVD 192
Query: 292 KVLWR 296
++L +
Sbjct: 193 EILEK 197
>gi|163781838|ref|ZP_02176838.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883058|gb|EDP76562.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 201
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 114/187 (60%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G P+ V L+VA+L++L+ DP IYLYINS G G
Sbjct: 26 DIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G A+YDT+ +K +V T+ +G A M +LLAAG KGKR+ +PH++IMI QP
Sbjct: 77 SVTAGMAVYDTMQYIKPDVVTICIGQAASMGAVLLAAGAKGKRYALPHSRIMIHQPLGGI 136
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D++I A+E + L ++LAKHTG E + K + R Y M + AK++GVID
Sbjct: 137 QG--QATDIIIHAEEIKRIKRMLNEILAKHTGQDLEKIEKDVERDYFMSAEEAKDYGVID 194
Query: 292 KVLWRGQ 298
KV+ + Q
Sbjct: 195 KVIEKRQ 201
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 118/188 (62%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ V LV+A+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G+A MA +LLAAG GKR+ +P+A++MI QP +
Sbjct: 70 VVTAGLAIYDTMQYIKPDVSTICLGSAASMAAVLLAAGAPGKRYALPYARVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + R+ L +LA+HTG E + R Y M S AKE+G+ID
Sbjct: 130 QG--QATDIQIQAREILRLREILNDILARHTGKPLERIQHDTERDYFMSSEEAKEYGIID 187
Query: 292 KVLWRGQE 299
V+ RG++
Sbjct: 188 AVVVRGEQ 195
>gi|373851099|ref|ZP_09593900.1| ATP-dependent Clp protease proteolytic subunit [Opitutaceae
bacterium TAV5]
gi|391228002|ref|ZP_10264209.1| protease subunit of ATP-dependent protease [Opitutaceae bacterium
TAV1]
gi|372477264|gb|EHP37273.1| ATP-dependent Clp protease proteolytic subunit [Opitutaceae
bacterium TAV5]
gi|391223495|gb|EIQ01915.1| protease subunit of ATP-dependent protease [Opitutaceae bacterium
TAV1]
Length = 208
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 116/183 (63%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V +V+A+L++LQ DPK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFLQMEDPKKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C+V T VG A MA +LL+AGTKGKRF +P++++MI QP +
Sbjct: 71 VVTGGMAIYDTINFLQCDVVTYCVGQAASMATVLLSAGTKGKRFALPNSRVMIHQPSGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +D+ I AKE + R TL + +A+HTG + E V K R Y+M + A+ +G++D
Sbjct: 131 GG--QTADIAIAAKEILRWRRTLSETIARHTGKTAEQVDKDSDRDYYMSALEAQAYGLVD 188
Query: 292 KVL 294
V+
Sbjct: 189 HVV 191
>gi|282891306|ref|ZP_06299808.1| hypothetical protein pah_c050o084 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175057|ref|YP_004651867.1| ATP-dependent Clp protease proteolytic subunit 2 [Parachlamydia
acanthamoebae UV-7]
gi|281498803|gb|EFB41120.1| hypothetical protein pah_c050o084 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479415|emb|CCB86013.1| ATP-dependent Clp protease proteolytic subunit 2 [Parachlamydia
acanthamoebae UV-7]
Length = 202
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 128/225 (56%), Gaps = 32/225 (14%)
Query: 70 RPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPL 129
RP NS T P ++ A+ ERS D+ S LL RIV+IG +
Sbjct: 5 RPFNSLT---------PYVIEDTARGERSM------------DIFSRLLQDRIVFIGTDI 43
Query: 130 VPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCE 189
V +VVA+L++L+ DPK ++LYINS G G + G AIYDTL M C+
Sbjct: 44 TDQVANIVVAQLLFLKMEDPKKDVHLYINSMG---------GYITSGLAIYDTLRWMTCD 94
Query: 190 VHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMV 249
V+T +G A M LLL AGTKGKRF +P+++IMI QP G +SD++++AKE +V
Sbjct: 95 VNTYCIGQASSMGALLLMAGTKGKRFALPNSRIMIHQPSGGVGG--TSSDIMLQAKEILV 152
Query: 250 NRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
+ +L +++A TG S E + R ++M + AKE+G+ID+V+
Sbjct: 153 LKRSLHEIMAGATGQSVERIAADSERDFYMSPQEAKEYGIIDEVV 197
>gi|391228000|ref|ZP_10264207.1| protease subunit of ATP-dependent protease, partial [Opitutaceae
bacterium TAV1]
gi|391223493|gb|EIQ01913.1| protease subunit of ATP-dependent protease, partial [Opitutaceae
bacterium TAV1]
Length = 225
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 116/183 (63%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V +V+A+L++LQ DPK I+LYINS G G
Sbjct: 37 DIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFLQMEDPKKDIHLYINSPG---------G 87
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C+V T VG A MA +LL+AGTKGKRF +P++++MI QP +
Sbjct: 88 VVTGGMAIYDTINFLQCDVVTYCVGQAASMATVLLSAGTKGKRFALPNSRVMIHQPSGGA 147
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +D+ I AKE + R TL + +A+HTG + E V K R Y+M + A+ +G++D
Sbjct: 148 GG--QTADIAIAAKEILRWRRTLSETIARHTGKTAEQVDKDSDRDYYMSALEAQAYGLVD 205
Query: 292 KVL 294
V+
Sbjct: 206 HVV 208
>gi|303275766|ref|XP_003057177.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461529|gb|EEH58822.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 372
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 153/262 (58%), Gaps = 13/262 (4%)
Query: 41 PMPAHINPN-DPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSA 99
P AH P+ DPF + +A AS + +N G + T M+ SA
Sbjct: 93 PDQAHRRPDVDPF----SISARASYRNEMPCEANGGPVSMT------TAMSGGGNFTMSA 142
Query: 100 SYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINS 159
N PP LPSLLL+ RIVYIGMPL+PAVTELVVAEL++L + + P Y+YI+S
Sbjct: 143 GMNTGGAGPPPD-LPSLLLNARIVYIGMPLLPAVTELVVAELLFLNYEQNERPGYMYIHS 201
Query: 160 TGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPH 219
G+ + GE VG+++E +AI DT+ +K ++HTVAVG G A +LLAAG G R +P+
Sbjct: 202 GGSINEKGEVVGIDTEAYAILDTMRYIKPKMHTVAVGKCFGNAAMLLAAGHPGCRHALPN 261
Query: 220 AKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHM 279
A+IM P+L + A +V IRA E V DT + +++ +G +E VT+ + R +
Sbjct: 262 AQIMTHPPKLNRT-FDTAVNVQIRANEIDVCEDTYMGFMSEFSGKPQEEVTRDLDRRRYF 320
Query: 280 DSRRAKEFGVIDKVLWRGQETI 301
++A E+G+ID+++ +G +
Sbjct: 321 TPKQAIEYGLIDRIIQKGSDVF 342
>gi|389843764|ref|YP_006345844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
gi|387858510|gb|AFK06601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
Length = 205
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 116/183 (63%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + LL RIV++G P+ V+ +VVA+L++L+ DP+ I LYINS G G
Sbjct: 24 DIYTKLLSERIVFLGWPIDDEVSNIVVAQLLFLESQDPEKDINLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K ++ T+ +G A M +LLA GTKGKRF +P++++MI QP +
Sbjct: 75 SITSGLAIYDTMQYIKPDISTICIGMAASMGAILLAGGTKGKRFALPNSRVMIHQPFGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G+ A D+ IRA+E + RD L K+LAKHTG S + + K R + M S A E+G+ID
Sbjct: 135 EGV--AKDIEIRAREILYLRDELNKILAKHTGQSIKKIEKDADRDFFMSSTEAVEYGMID 192
Query: 292 KVL 294
KV+
Sbjct: 193 KVI 195
>gi|218197363|gb|EEC79790.1| hypothetical protein OsI_21214 [Oryza sativa Indica Group]
Length = 386
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Query: 104 HRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTT 163
R + PDLPSLLL RI+++GMP+VPAVTEL+ A+ ++L + D PIYLYINSTGT
Sbjct: 154 RRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTM 213
Query: 164 RDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIM 223
++ V E++ FAI D + + K +V+T+ + A G A +LL+ G KGKR ++P++
Sbjct: 214 DENNGLVASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITK 273
Query: 224 IQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
+ P++ SG A D+ I+AKE N D ++LL+K G +E + + ++ P + ++
Sbjct: 274 LYLPKVHKSG-GAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQE 332
Query: 284 AKEFGVIDKVL 294
A ++G+ D +L
Sbjct: 333 AIDYGLADTIL 343
>gi|302838584|ref|XP_002950850.1| hypothetical protein VOLCADRAFT_74777 [Volvox carteri f.
nagariensis]
gi|300263967|gb|EFJ48165.1| hypothetical protein VOLCADRAFT_74777 [Volvox carteri f.
nagariensis]
Length = 421
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 118/174 (67%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL+VAEL+YL+ PI + INS+GTTR DGE + +SEG A+
Sbjct: 62 RIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTTRQDGEILSFDSEGVALT 121
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
T+ +K + TV +G A+G +C++L+ G KG R +PH+ MIQQPR+P +G A +V
Sbjct: 122 STMGFVKNPISTVNMGLAVGWSCVVLSFGRKGWRKSLPHSLAMIQQPRVPPTGQRQAIEV 181
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I+ +E + + L+++++ TG + + ++RP +M R A ++G+ID+++
Sbjct: 182 HIKWREVLDYKRELLRMMSIGTGLPVDKLDADMQRPLYMRPRDALDYGIIDEII 235
>gi|451979976|ref|ZP_21928378.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
gi|451762848|emb|CCQ89596.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
Length = 215
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 17/214 (7%)
Query: 81 DIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAE 140
DIY+ T P VE+++ D+ S LL RI++IG + + L++A+
Sbjct: 4 DIYNQITNQLVPIVVEQTSRGER------SYDIYSRLLKDRIIFIGQQIEDHMANLIIAQ 57
Query: 141 LMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIG 200
L++L+ +P IYLYINS G G S G AIYDT+ +K +V T+ +G A
Sbjct: 58 LLFLESDEPDQDIYLYINSPG---------GHVSSGLAIYDTMQYIKPDVQTICIGQAAS 108
Query: 201 MACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAK 260
M LLL AGTKGKRF +P++++MI QP G ++D+ I A+E + RDTL +LAK
Sbjct: 109 MGALLLTAGTKGKRFALPNSRVMIHQPSGGFQG--QSTDIQIHAEEILKVRDTLDDILAK 166
Query: 261 HTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
H+G ++ + + R + M +AKE+G+ID V+
Sbjct: 167 HSGQPKDVIRRDTERDHFMTGEQAKEYGLIDNVI 200
>gi|159464779|ref|XP_001690619.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158280119|gb|EDP05878.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 415
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 117/174 (67%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+GMPLVPAVTEL+VAEL+YL+ PI + INS+GTTR DGE + +SEG A+
Sbjct: 60 RIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTTRQDGEILSFDSEGVALT 119
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
T+ +K + TV +G A+G +C++L+ G KG R +PH+ MIQQPR+P +G A +V
Sbjct: 120 STMGFIKNPISTVNMGLAVGWSCVVLSFGRKGWRKSLPHSLAMIQQPRVPPTGQRQAIEV 179
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I+ +E + + L+++ + TG + + ++RP +M + A E+G+ID+++
Sbjct: 180 HIKWREVLDYKRELLRMFSLGTGLPVDKLDADMQRPLYMRPQDALEYGIIDEII 233
>gi|325294216|ref|YP_004280730.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064664|gb|ADY72671.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 200
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 115/188 (61%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ V L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 24 DIYSRLLKDRIIMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LLAAG KGKRF +PHA+IMI QP
Sbjct: 75 VVTAGLAIYDTMQYIKPDVVTICLGQAASMGAVLLAAGAKGKRFALPHARIMIHQPLGGF 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + + L ++L+KHTG S + K R Y M + A+++G+ID
Sbjct: 135 QG--QATDIEIHAKEILRLKKMLNEILSKHTGQSLRKIEKDTERDYFMSAEEAQKYGLID 192
Query: 292 KVLWRGQE 299
KVL R E
Sbjct: 193 KVLTRRGE 200
>gi|338811972|ref|ZP_08624171.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
gi|337275941|gb|EGO64379.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
Length = 202
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 117/187 (62%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ + LV+A+L++L+ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDTMANLVIAQLLFLESEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A MA +LL AG KGKR+ +P+A++MI QP +
Sbjct: 70 VVTAGLAIYDTMQYIKPDVSTICLGLAASMAAILLTAGAKGKRYALPYARVMIHQPHGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ +LA+H+G E V + + R + M + AKE+G+ID
Sbjct: 130 QG--QATDIEIHAREILRLREIGADILARHSGQPVEKVQRDLERDFFMSGQEAKEYGLID 187
Query: 292 KVLWRGQ 298
VL RG+
Sbjct: 188 SVLARGE 194
>gi|255088111|ref|XP_002505978.1| predicted protein [Micromonas sp. RCC299]
gi|226521249|gb|ACO67236.1| predicted protein [Micromonas sp. RCC299]
Length = 223
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 119/183 (65%), Gaps = 1/183 (0%)
Query: 119 HGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFA 178
+ RIVYIGMPL+PAVTELVVAEL++L + P Y+YI+S G+ + GE VG++SE +A
Sbjct: 18 NARIVYIGMPLLPAVTELVVAELLFLNYEQVDRPGYVYIHSPGSINEKGECVGVDSEAYA 77
Query: 179 IYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPAS 238
I DT+ ++ ++HTVAVG G A +LLAAG KG R +P+A+IM P+L + +
Sbjct: 78 ILDTMRYIRPKIHTVAVGKCFGNAAMLLAAGDKGCRHALPNAQIMTHPPKLNRT-FDTSV 136
Query: 239 DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQ 298
+V I+A E V DT + +++ +G E V + + R + ++A ++G+ID+++ +G
Sbjct: 137 NVQIKANEIEVCEDTYMGFMSEFSGKPIETVKEELDRRRYFTPQQAIDYGLIDRIIQKGT 196
Query: 299 ETI 301
+
Sbjct: 197 DVF 199
>gi|319789118|ref|YP_004150751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
gi|317113620|gb|ADU96110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
Length = 200
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G P+ V L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 24 DIYSRLLKDRIVMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LLAAG KGKRF +PHA+IMI QP
Sbjct: 75 VVTAGLAIYDTMQYIKPDVVTICMGQAASMGAVLLAAGAKGKRFALPHARIMIHQPLGGF 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + + L ++LAKHT E V + R Y M + AKE+G+ID
Sbjct: 135 QG--QATDIEIHAKEILRLKRMLNEILAKHTRQPVEKVEQDTERDYFMSAEEAKEYGLID 192
Query: 292 KVLWR 296
KVL R
Sbjct: 193 KVLTR 197
>gi|55792477|gb|AAV65338.1| plastid catalytic subunit of ClpP5 protease [Prototheca
wickerhamii]
Length = 251
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 88/115 (76%)
Query: 106 PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRD 165
P PPDLPSLLL GRI YIGMPLVPAVTELV++EL++L + P P+Y+YINSTG+ R+
Sbjct: 137 PGRAPPDLPSLLLDGRICYIGMPLVPAVTELVISELLWLNYSSPTKPVYVYINSTGSQRE 196
Query: 166 DGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHA 220
GESVG E+E AI DT+ ++ +++T+ +G A G A +LLA+G KG RF +PH+
Sbjct: 197 GGESVGFETEATAIMDTMAYIRPDIYTLVIGQACGNAAMLLASGKKGHRFALPHS 251
>gi|217967475|ref|YP_002352981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
gi|217336574|gb|ACK42367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
Length = 194
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 115/188 (61%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 18 DIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPEKDIYLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V TV VG A MA +LLAAG KGKR+ +PH+++MI QP +
Sbjct: 69 EVSAGLAIYDTIRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRVMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G PA+D+ I +E + + L ++LA HTG E + K R + M + AKE+G++D
Sbjct: 129 YG--PAADIEIHTREILKIKRVLNEILAYHTGQPIEKIEKDTDRDFFMSAYEAKEYGIVD 186
Query: 292 KVLWRGQE 299
+VL +E
Sbjct: 187 EVLESKKE 194
>gi|206901598|ref|YP_002250810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
gi|206740701|gb|ACI19759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
Length = 194
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 115/188 (61%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V LVVA+L++L+ DP+ IYLYINS G G
Sbjct: 18 DIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPEKDIYLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V TV VG A MA +LLAAG KGKR+ +PH+++MI QP +
Sbjct: 69 EVSAGLAIYDTMRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRVMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G PA+D+ I +E + + L ++LA HTG E + + R + M + AKE+G++D
Sbjct: 129 YG--PAADIEIHTREILKIKRVLNEILAHHTGQPIEKIERDTDRDFFMSAYEAKEYGIVD 186
Query: 292 KVLWRGQE 299
+VL +E
Sbjct: 187 EVLESKKE 194
>gi|428776590|ref|YP_007168377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428690869|gb|AFZ44163.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 200
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 113/192 (58%), Gaps = 12/192 (6%)
Query: 106 PDTPPPDLPSL---LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGT 162
P P D ++ L RI+++G + ++ V+A ++YL DP PIYLYINS G
Sbjct: 13 PGQPYSDWVNIYDRLYRERIIFLGRGINDSLANQVIAVMLYLDSEDPSKPIYLYINSPG- 71
Query: 163 TRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKI 222
G S G AIYDT+ +K EV T+ VG A M LL+AGTKGKR +PH++I
Sbjct: 72 --------GSVSAGMAIYDTMQHIKSEVVTICVGIAASMGAFLLSAGTKGKRLALPHSRI 123
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
MI QP + G A+D+ I A+E + R+ L K++A++TG + E + K R Y M +
Sbjct: 124 MIHQPMGGTQGRRQATDIEIEAREILRIREQLDKIMAENTGQTIERIKKDTDRDYFMSAE 183
Query: 283 RAKEFGVIDKVL 294
AKE+G+ID+V+
Sbjct: 184 EAKEYGIIDRVI 195
>gi|327398620|ref|YP_004339489.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM
10411]
gi|327181249|gb|AEA33430.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM
10411]
Length = 205
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 116/184 (63%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + V+ ++V++L++L+ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLNGEINDDVSNVIVSQLLFLESEDPEKDIFLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ +G+A M LLLA+GTKGKR+ +PH++IMI QP
Sbjct: 70 SVTAGLAIYDTMQYIKCDVTTICIGSAASMGALLLASGTKGKRYSLPHSRIMIHQPLGGI 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A+++ I AKE + + L ++LAKHTG + + K R Y MD++ A +G+ID
Sbjct: 130 SG--QATEIEIHAKEILRLKKLLNEILAKHTGKRLKTIEKDTERDYFMDTKEALAYGIID 187
Query: 292 KVLW 295
K+++
Sbjct: 188 KIIY 191
>gi|392959640|ref|ZP_10325122.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|421052494|ref|ZP_15515483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|421058665|ref|ZP_15521332.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
gi|421066386|ref|ZP_15528000.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|421070550|ref|ZP_15531682.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392443225|gb|EIW20776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|392448176|gb|EIW25379.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392456193|gb|EIW32947.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|392456278|gb|EIW33029.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|392460320|gb|EIW36635.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
Length = 201
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 119/188 (63%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V LV+A+L++L+ DP+ I++YINS G G
Sbjct: 19 DIFSRLLKDRIIFIGGPIDDNVANLVIAQLLFLESEDPEKDIHVYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G+A M LLL AG KGKR+ +P+A+IMI QP +
Sbjct: 70 VVTAGLAIYDTMQYIKPDVSTICLGSAASMGALLLTAGAKGKRYALPYARIMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ L +L +HTG +++ + R + M + +AKE+G+ID
Sbjct: 130 QG--QATDIEIHAREILRLRELLNGILIQHTGQTKDKIEHDTERDFFMSAEQAKEYGLID 187
Query: 292 KVLWRGQE 299
V+ RG++
Sbjct: 188 AVVVRGEK 195
>gi|385810287|ref|YP_005846683.1| ATP-dependent Clp protease catalytic subunit [Ignavibacterium album
JCM 16511]
gi|383802335|gb|AFH49415.1| ATP-dependent Clp protease catalytic subunit [Ignavibacterium album
JCM 16511]
Length = 206
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ + L +A+L++L+ DP+ I++YINS G G
Sbjct: 27 DIYSRLLRERIVFIGTPIDDHIASLTIAQLIFLEAEDPEKDIHIYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A MA +LLA GTKGKRF +PH+KI+I QP
Sbjct: 78 SVTAGLAIYDTMRFIKPDVSTICVGMAASMAAVLLAGGTKGKRFALPHSKILIHQPWTQG 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +DV I AKE + R+TL +LA+HTG E + K R Y + ++ AKE+ +ID
Sbjct: 138 IG-GQVTDVEIHAKEMLKTRETLYNILAEHTGKPYEQIAKDCERDYFLTAQEAKEYNLID 196
Query: 292 KVLWR 296
++ +
Sbjct: 197 DIIEK 201
>gi|442323969|ref|YP_007363990.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441491611|gb|AGC48306.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 203
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 113/187 (60%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+ +G P+ V ++VA+L++L+ DP I LYINS G G
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ VG A M LLL AG KGKR+ +P+++IMI QP +
Sbjct: 69 SVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R L L+ KHTG+S E + K R Y M + A+++G+ID
Sbjct: 129 QG--QATDIDIQAKEILRLRSYLNGLIVKHTGHSIERIEKDTERDYFMSAEDARQYGIID 186
Query: 292 KVLWRGQ 298
+V+ + Q
Sbjct: 187 EVVEKQQ 193
>gi|262198158|ref|YP_003269367.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haliangium
ochraceum DSM 14365]
gi|262081505|gb|ACY17474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haliangium
ochraceum DSM 14365]
Length = 207
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 114/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL IV++G P+ AV +++A+L++L+ DP+ I LYINS G G
Sbjct: 27 DIFSRLLKEGIVFLGTPVDDAVANVIIAQLLHLESEDPEKDIMLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++C+V T+ +G A M LLAAG KGKRF +PHA++MI QP
Sbjct: 78 SVTAGLAIYDTMQYLRCDVATICMGQASSMGAFLLAAGAKGKRFALPHARVMIHQPLGGF 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG PA+D+ I A+E + R+TL ++LA+HTG + + + R Y M + A +G+ID
Sbjct: 138 SG--PATDIDIYAREVLKTRETLNRVLAEHTGQPLDRIAEDTERDYFMSADEACAYGLID 195
Query: 292 KVL 294
+V+
Sbjct: 196 EVI 198
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96.1|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R ++IG P+ V LV+A++++L+ DP+ I+LYINS G G
Sbjct: 20 DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A+IMI QP
Sbjct: 71 VITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + RD L +LL KHTG +E + + R + M + AKE+G+ID
Sbjct: 131 QG--QATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIID 188
Query: 292 KVL 294
+V+
Sbjct: 189 EVI 191
>gi|397691263|ref|YP_006528517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
gi|395812755|gb|AFN75504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
Length = 222
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L++A+L++L+ DP IYLYINS G G
Sbjct: 37 DIFSRLLRERIVFLGTAIDDHIASLIIAQLLFLEAEDPDKDIYLYINSPG---------G 87
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ +V T+ VG A M +LLA G GKR +PH+KIMI QP +
Sbjct: 88 SVSAGLAIYDTMKYIRSKVSTICVGLAASMGAVLLAGGEAGKRSALPHSKIMIHQPWV-- 145
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL +D+ I AKE + RDT+ K+LA+HTG S E + K R Y M + AKE+ +I
Sbjct: 146 GGLQGQTTDIEIHAKEMIKTRDTIYKILAEHTGKSYEQIAKDCDRDYFMTAEEAKEYNLI 205
Query: 291 DKVL 294
D +L
Sbjct: 206 DNIL 209
>gi|215433747|gb|ACJ66732.1| putative ATP-dependent Clp protease proteolytic subunit, partial
[Arabidopsis thaliana]
Length = 99
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 79/91 (86%)
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
MIQQPR+PSSGL+PASDVLIRAKE + NRD LV+LL+KHTGNS E V +RRPY+MD+
Sbjct: 1 MIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAP 60
Query: 283 RAKEFGVIDKVLWRGQETIMAEVAPPEEWDK 313
+AKEFGVID++LWRGQE I+A+V P EE+DK
Sbjct: 61 KAKEFGVIDRILWRGQEKIIADVVPSEEFDK 91
>gi|225848210|ref|YP_002728373.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644423|gb|ACN99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 202
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 115/190 (60%), Gaps = 11/190 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ V L+VA+L++L+ DP+ IY+YINS G G
Sbjct: 24 DIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDPEKDIYMYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GFAIYDT+ +K +V T+ +G A M LL+AG KGKR+ +P+A+IMI QP
Sbjct: 75 VVTAGFAIYDTMNYIKPDVVTICIGQAASMGAFLLSAGAKGKRYSLPNARIMIHQPLGGF 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + + L + LAKHTG E + R Y M + AKE+G+ID
Sbjct: 135 QG--QATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKEYGLID 192
Query: 292 KVLWRGQETI 301
KV+++ E +
Sbjct: 193 KVIYKRGENV 202
>gi|261415786|ref|YP_003249469.1| endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790679|ref|YP_005821802.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372242|gb|ACX74987.1| Endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326653|gb|ADL25854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 196
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 118/190 (62%), Gaps = 11/190 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V V+A+L++L++ +P+ I LYINS G G
Sbjct: 18 DIYSRLLKERIIFLGTPINDEVANNVMAQLIFLEYENPEKDITLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ + T+ +G+ MA +LLAAGTKGKR+ +PH++IM+ QP +
Sbjct: 69 YVSAGLAIYDTMQHVRPNIATICIGSCASMAAVLLAAGTKGKRYALPHSRIMLHQPSGAA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G ++D+ I AKE + +DTL +++AKHTG + V + R ++M AK FGVID
Sbjct: 129 TG--QSTDIQITAKEIIRTKDTLTEIVAKHTGKPVDEVREKTDRDFYMSPEEAKAFGVID 186
Query: 292 KVLWRGQETI 301
++ +E I
Sbjct: 187 EIFVPRKEGI 196
>gi|86610014|ref|YP_478776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|115311349|sp|Q2JIP1.1|CLPP2_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86558556|gb|ABD03513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 200
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 126/221 (57%), Gaps = 23/221 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ A+ ER+ D+ S LL RI+++G + + L+VA+++YL+
Sbjct: 3 PTVIEQSARGERAF------------DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLE 50
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP+ IYLYINS G G G AIYDT+ ++ +V T+ +G A M L
Sbjct: 51 SEDPEKDIYLYINSPG---------GSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFL 101
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA GTKGKR +PHA+IMI QP + G PA+D+ I+AKE + +++L LLA HTG
Sbjct: 102 LAGGTKGKRIALPHARIMIHQPLGGAQG--PATDIEIQAKEILFIKNSLNSLLAYHTGQP 159
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVA 306
E + + R M +AKE+G+ID+V+ + + +A V+
Sbjct: 160 LERIERDTDRDNFMTPEQAKEYGLIDQVISKRPQPTLAAVS 200
>gi|337286231|ref|YP_004625704.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
gi|335359059|gb|AEH44740.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
Length = 202
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ + LV+A+L++L+ DP I LYINS G G
Sbjct: 18 DIYSRLLRERIVFIGAPIDDHLANLVIAQLLFLEAEDPDRDITLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K ++ T+ +G A MA +LLA GTKGKR+ +PH++IM+ QP
Sbjct: 69 IVTSGLAIYDTMQYIKPDICTLCLGQAASMAAVLLAGGTKGKRYALPHSRIMLHQPIGSF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+DV I+A+E + R L ++LA HTG E + K R ++M S A+++GVID
Sbjct: 129 QG--QATDVDIQAREILRLRAMLNEILANHTGQPIEQIQKDTERDFYMSSEEAQKYGVID 186
Query: 292 KVLWR 296
K+L +
Sbjct: 187 KILTK 191
>gi|375084538|ref|ZP_09731403.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
gi|374568042|gb|EHR39235.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
Length = 198
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 121/188 (64%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +V+A+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGPIDDNVANVVIAQLLFLESEDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LLAAG KGKR+ +P+++IMI QP +
Sbjct: 70 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGSVLLAAGAKGKRYALPYSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+A+E + R+TL ++L++HTG S + +T+ R M + AK++G+ID
Sbjct: 130 QG--QSTDIQIQAREILRIRETLNEILSRHTGQSVKKLTEDTERDNFMSALEAKKYGLID 187
Query: 292 KVLWRGQE 299
+V+ R QE
Sbjct: 188 EVIIRPQE 195
>gi|337288342|ref|YP_004627814.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium sp. OPB45]
gi|334902080|gb|AEH22886.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium geofontis OPF15]
Length = 194
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 115/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG + V LV+A+L+YL+ DP I LYINS G G
Sbjct: 20 DIYSRLLKERIVFIGTTIDENVANLVIAQLLYLEAEDPDKDIMLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG A MA +LLAAGTKGKR+ + H++IM+ QP
Sbjct: 71 LVTAGLAIYDTIQYIKPDVCTICVGQAASMAAVLLAAGTKGKRYALRHSRIMLHQPIGAF 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A++V I+AKE + R+ + ++L++HTG +E + + R ++M + A E+G+ID
Sbjct: 131 QG--QATEVEIQAKEILRLREIITEILSQHTGQPKEKIKQDTERDFYMSAEEALEYGIID 188
Query: 292 KVL 294
K+L
Sbjct: 189 KIL 191
>gi|289548353|ref|YP_003473341.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
gi|289181970|gb|ADC89214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
Length = 199
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G P+ V L+VA+L++L+ DP+ IY+YINS G G
Sbjct: 24 DIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYMYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A MA +LLAAG KGKR+ +PH++IMI QP
Sbjct: 75 SVTAGMAIYDTMQYIKPDVVTICIGQAASMAAVLLAAGAKGKRYSLPHSRIMIHQPMGGI 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A+D++I A+E + L +++AKHTG V + + R Y M + A E+G++D
Sbjct: 135 SG--QATDIIIHAEEIKRIKHMLNEIIAKHTGQPLSKVEQDVERDYFMSAYEAMEYGIVD 192
Query: 292 KVLWR 296
KV+ +
Sbjct: 193 KVIEK 197
>gi|288818082|ref|YP_003432430.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|384128847|ref|YP_005511460.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
gi|288787482|dbj|BAI69229.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|308751684|gb|ADO45167.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 115/187 (61%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G P+ V L+VA+L++L+ DP+ IY+YINS G G
Sbjct: 24 DIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYMYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M +LLAAG GKR+ +PH++IMI QP
Sbjct: 75 SVTAGMAIYDTMQYIKPDVVTICIGQAASMGAVLLAAGAPGKRYALPHSRIMIHQPLGGI 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G A+D++I A+E + L ++L+KHTG E + + + R Y M S A+E+G++D
Sbjct: 135 TG--QATDIIIHAEEIKRIKHMLNEILSKHTGQPLERIERDVERDYFMSSEEAREYGIVD 192
Query: 292 KVLWRGQ 298
+V+ + Q
Sbjct: 193 RVIAKRQ 199
>gi|86605879|ref|YP_474642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
gi|115311348|sp|Q2JV68.1|CLPP2_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86554421|gb|ABC99379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
Length = 200
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 120/211 (56%), Gaps = 23/211 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ A+ ER+ D+ S LL RI+++G + + L+VA+++YL+
Sbjct: 3 PTVIEQSARGERAF------------DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLE 50
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP+ IYLYINS G G G AIYDT+ ++ +V T+ +G A M L
Sbjct: 51 SEDPEKDIYLYINSPG---------GSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFL 101
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA G KGKR +PHA+IMI QP + G PA+D+ I+AKE + +++L LLA HTG
Sbjct: 102 LAGGAKGKRIALPHARIMIHQPLGGAQG--PATDIEIQAKEILFIKNSLNSLLAYHTGQP 159
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
E + + R M +AKE+G+ID+V+ R
Sbjct: 160 LERIERDTDRDNFMTPEQAKEYGLIDQVITR 190
>gi|302817596|ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
gi|300141641|gb|EFJ08350.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
Length = 253
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 120/193 (62%), Gaps = 11/193 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L+YL+ +P PI+LYINS G G
Sbjct: 45 DIFSRLLKERIVCIHGPIADDTASLVVAQLLYLESENPLKPIHLYINSPG---------G 95
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ VG A M LLLAAG G+R +P+A++M+ QP +
Sbjct: 96 VVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQRRSLPNARVMVHQPSGGA 155
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I+A+E + R L KL AKHTG+S E + +++ R + M AKEFG+ID
Sbjct: 156 SG--QASDIAIQAREILDMRSRLNKLYAKHTGSSIEKIDQSMERDHFMSPEEAKEFGLID 213
Query: 292 KVLWRGQETIMAE 304
+V+ + E+++A+
Sbjct: 214 EVIVQRPESLVAD 226
>gi|383787009|ref|YP_005471578.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
gi|383109856|gb|AFG35459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
Length = 206
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 115/187 (61%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LVVA+L++L+ +P I LYINS G G
Sbjct: 30 DIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +KC+V T+ +G A MA +LLAAG KGKRF +P+++IMI QP +
Sbjct: 81 LVTAGLAIYDTMQYVKCDVATICIGQAASMAAVLLAAGAKGKRFALPNSRIMIHQPLGGA 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A DV I KE + + + ++L+KHTG E + K R + M ++ AKE+G+ID
Sbjct: 141 EG--TAKDVEILTKELLRIKHLINEILSKHTGQPIEKIEKDTDRDFFMSAQEAKEYGIID 198
Query: 292 KVLWRGQ 298
+V+ G+
Sbjct: 199 RVIMPGE 205
>gi|326502578|dbj|BAJ95352.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506866|dbj|BAJ91474.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 300
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 117/193 (60%), Gaps = 11/193 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P PI LYINS G G
Sbjct: 88 DIFSRLLKERIVCIHGPIADETASLVVAQLLFLESENPLKPISLYINSPG---------G 138
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V+T+ +G A M LLLAAG +G+R +P+A++MI QP +
Sbjct: 139 VVTAGLAIYDTMQYIRCPVNTICIGQAASMGSLLLAAGARGERRALPNARVMIHQPSGGA 198
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ AKHTG + + + + + R MD A+E+G+ID
Sbjct: 199 QGQ--ATDIAIQAKEILKLRDRLNKIYAKHTGQNIDKIEQCMERDLFMDPEEAREWGLID 256
Query: 292 KVLWRGQETIMAE 304
+V+ ++M E
Sbjct: 257 EVIENRPASLMPE 269
>gi|15606541|ref|NP_213921.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
gi|6225158|sp|O67357.1|CLPP_AQUAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2983755|gb|AAC07315.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
Length = 201
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G P+ V L+VA+L++L+ DP IYLYINS G G
Sbjct: 26 DIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M +LLAAG GKR+ +PH++IMI QP
Sbjct: 77 SVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIHQPLGGI 136
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D++I A+E ++ L+ +LAKHTG ++ + I R Y M AK++G+ID
Sbjct: 137 QG--QATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYFMSPYEAKDYGLID 194
Query: 292 KVLWR 296
KV+ +
Sbjct: 195 KVIEK 199
>gi|357150338|ref|XP_003575425.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Brachypodium distachyon]
Length = 302
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 117/193 (60%), Gaps = 11/193 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P PI LYINS G G
Sbjct: 94 DIFSRLLKERIVCIHGPIADETASLVVAQLLFLESENPLKPISLYINSPG---------G 144
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V+T+ +G A M LLLAAG +G+R +P+A++MI QP +
Sbjct: 145 VVTAGLAIYDTMQYIRCPVNTICIGQAASMGSLLLAAGARGERRALPNARVMIHQPSGGA 204
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ AKHTG + + + + + R MD A+E+G+ID
Sbjct: 205 QGQ--ATDIAIQAKEILKLRDRLNKIYAKHTGQNIDKIEQCMERDLFMDPEEAREWGLID 262
Query: 292 KVLWRGQETIMAE 304
+V+ ++M E
Sbjct: 263 EVIENRPASLMPE 275
>gi|333977877|ref|YP_004515822.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821358|gb|AEG14021.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 197
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V LV+A++++L+ DP+ I+ YINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHFYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LLAAG KGKR+ +P+A+IM+ QP
Sbjct: 71 VVTAGLAIYDTMQYIKPDVSTICLGQAASMGSFLLAAGAKGKRYALPYARIMLHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+E + +D L +LLAKHTG E + + R + M + AKE+G+ID
Sbjct: 131 QG--QATEIEIHAREILRIKDILNELLAKHTGQPREKIARDTDRDFFMSAEEAKEYGIID 188
Query: 292 KVL 294
+VL
Sbjct: 189 EVL 191
>gi|269792564|ref|YP_003317468.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100199|gb|ACZ19186.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 199
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 125/222 (56%), Gaps = 27/222 (12%)
Query: 75 GTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVT 134
GT+ YL P ++ + ERS D+ S LL RI++IG + ++
Sbjct: 4 GTMSYL----IPYVIEQTGRGERSY------------DIYSRLLKDRIIFIGQEIDDHLS 47
Query: 135 ELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVA 194
LVVA+L++L+ DP +++YINS G G+ + G AIYDT+ +KC V T+
Sbjct: 48 NLVVAQLLFLESEDPDKDVFVYINSPG---------GVVTAGLAIYDTMQYVKCPVSTIC 98
Query: 195 VGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTL 254
VG A MA +LL+AG KGKR +PH++IMI QP + G ASD+ I+AKE + ++ L
Sbjct: 99 VGQAASMAAVLLSAGEKGKRICLPHSRIMIHQPLGGAQG--QASDIEIQAKEILRMKEIL 156
Query: 255 VKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
+L+ HTG + + K R + M + A +G++DKV+ R
Sbjct: 157 NSILSNHTGQPMDRIAKDTDRDFFMSAEEAMAYGIVDKVIDR 198
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 116/189 (61%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V ++VA++++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG A M +LL AG KGKR+ +PHA+IMI QP +
Sbjct: 71 VVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ ++LA HTG E + R M + AKE+G+ID
Sbjct: 131 QG--QSTDIQIQAKEILRLREVGNEILAHHTGQDTEKINVDTERDNFMSAEEAKEYGLID 188
Query: 292 KVLWRGQET 300
+V+ R ++T
Sbjct: 189 EVVLRPKDT 197
>gi|356498557|ref|XP_003518117.1| PREDICTED: uncharacterized protein LOC100816393 [Glycine max]
Length = 383
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 103/147 (70%), Gaps = 6/147 (4%)
Query: 25 KSTRSLKTFCS---AKIPNPMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLD 81
S ++LKT CS AKI P NP D FLSKL+ AA+SP+ +N P S T PYLD
Sbjct: 21 NSCKNLKTSCSVNKAKITMP---PFNPKDLFLSKLSIVAASSPKMLLNTPKISYTPPYLD 77
Query: 82 IYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAEL 141
+DSP LMA P +VERS SYNEH P P+LPSLLLHGRIVYI M + ++ LV+A L
Sbjct: 78 FFDSPKLMALPLKVERSISYNEHHSKRPLPNLPSLLLHGRIVYIVMHVSVQLSILVIANL 137
Query: 142 MYLQWMDPKAPIYLYINSTGTTRDDGE 168
MYL++MDPK PIY+Y NST TTRDDGE
Sbjct: 138 MYLEYMDPKDPIYIYKNSTRTTRDDGE 164
>gi|302804055|ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
gi|300148617|gb|EFJ15276.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
Length = 206
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 120/193 (62%), Gaps = 11/193 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L+YL+ +P PI+LYINS G G
Sbjct: 22 DIFSRLLKERIVCIHGPIADDTASLVVAQLLYLESENPLKPIHLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ VG A M LLLAAG G+R +P+A++M+ QP +
Sbjct: 73 VVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQRRSLPNARVMVHQPSGGA 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I+A+E + R L KL AKHTG+S E + +++ R + M AKEFG+ID
Sbjct: 133 SG--QASDIAIQAREILDMRSRLNKLYAKHTGSSIEKIDQSMERDHFMSPEEAKEFGLID 190
Query: 292 KVLWRGQETIMAE 304
+V+ + E+++A+
Sbjct: 191 EVIVQRPESLVAD 203
>gi|67921362|ref|ZP_00514880.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416383634|ref|ZP_11684482.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67856474|gb|EAM51715.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357265220|gb|EHJ14013.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 200
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA L+YL DP PIYLYINS G G
Sbjct: 22 DIYTRLGQERIIFLGQEVSDGIANRIVALLLYLDSDDPNKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K EV T+ VG A M LLAAGT GKR +PHA+IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPHARIMIHQPLGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A E + R L +LLA G S E + K R Y M + AKE+G+ID
Sbjct: 133 GGRRQATDIEIEANEILRIRAQLNQLLADQCGQSLEKIEKDTDRDYFMSAEEAKEYGLID 192
Query: 292 KVL 294
KV+
Sbjct: 193 KVI 195
>gi|126657894|ref|ZP_01729047.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620834|gb|EAZ91550.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 199
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 105/183 (57%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA L+YL DP PIYLYINS G G
Sbjct: 22 DIYTRLGQERIIFLGQEVTDGIANRIVALLLYLDSEDPSKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K EV T+ VG A M LLAAGT GKR +PHA+IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPHARIMIHQP-MGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G ASD+ I A E + R L +LLA G + E + K R Y M + AKE+G+ID
Sbjct: 132 TGRRQASDIEIEANEILRIRSQLNQLLANQCGQTLEKIEKDTDRDYFMSAEEAKEYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|189219051|ref|YP_001939692.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
gi|189185909|gb|ACD83094.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
Length = 219
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ + LV+A+L++LQ DPK I LYI+S G G
Sbjct: 28 DIFSRLLKDRIVFIGTPIDDNMANLVIAQLLFLQMEDPKKDINLYIHSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V+T +G A MA +LLAAGTKGKRF +P+A+IMI QP +
Sbjct: 79 YVTAGMAIYDTMQFLSCDVNTYCIGQAASMAAVLLAAGTKGKRFALPNARIMIHQPLGGA 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L ++L+ HT E + K R + M + AK +G+ID
Sbjct: 139 QG--QASDISIQAQEILRTKRLLNEILSYHTKQPLERIEKDTDRDFFMSAEDAKAYGIID 196
Query: 292 KVL 294
+V+
Sbjct: 197 EVV 199
>gi|297569273|ref|YP_003690617.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
gi|296925188|gb|ADH85998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
Length = 200
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 114/189 (60%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V +++A++++L+ DP I YINS G G
Sbjct: 19 DIYSRLLKERIIFLGTGVNDDVANVIIAQMLFLEADDPDKDITFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +KC+V T+ +G A M +LLAAGT+GKR+ +P+++I+I QP
Sbjct: 70 VVTAGLAIYDTMRYIKCDVATLCLGQAASMGAVLLAAGTEGKRYALPNSRILIHQPMGGY 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + R L ++LA HTG S + + K R Y M + +K +G+ID
Sbjct: 130 QG--QASDIDIHAKEILRMRQDLNRILASHTGQSIKRIQKDTERDYFMSAEESKTYGIID 187
Query: 292 KVLWRGQET 300
KVL+ +T
Sbjct: 188 KVLYERTKT 196
>gi|326492708|dbj|BAJ90210.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 117/193 (60%), Gaps = 11/193 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P PI LYINS G G
Sbjct: 73 DIFSRLLKERIVCIHGPIADETASLVVAQLLFLESENPLKPISLYINSPG---------G 123
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V+T+ +G A M LLLAAG +G+R +P+A++MI QP +
Sbjct: 124 VVTAGLAIYDTMQYIRCPVNTICIGQAASMGSLLLAAGARGERRALPNARVMIHQPSGGA 183
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ AKHTG + + + + + R MD A+E+G+ID
Sbjct: 184 QG--QATDIAIQAKEILKLRDRLNKIYAKHTGQNIDKIEQCMERDLFMDPEEAREWGLID 241
Query: 292 KVLWRGQETIMAE 304
+V+ ++M E
Sbjct: 242 EVIENRPASLMPE 254
>gi|15615680|ref|NP_243984.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|18203165|sp|Q9K888.1|CLPP2_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|10175740|dbj|BAB06837.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + +VA+L++L+ +PK IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +K +HT+ G A A +LL AGTKGKRF +P+++IMI QP +
Sbjct: 71 STSAGFAIYDTMQFVKPSIHTICTGMAASFAAILLLAGTKGKRFALPNSEIMIHQPSGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + R+ LV + ++ TG S E V K + R Y M + A E+G++D
Sbjct: 131 QG--QASDLAITAKRILGIREKLVTVTSERTGQSPEKVAKDMDRDYFMSAEEALEYGIVD 188
Query: 292 KVL 294
+++
Sbjct: 189 QII 191
>gi|160902469|ref|YP_001568050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
gi|160360113|gb|ABX31727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
Length = 205
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V +++A+L++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDPDKDIFLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ +K ++ T+ +G A M +LLAAG KGKR+ +P+++IMI QP +
Sbjct: 71 SVTSGLGIYDTMQYVKPDISTICIGQAASMGAVLLAAGAKGKRYSLPYSRIMIHQPWGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I A+E + +D L +L+KHTG S E + K R + M+++ A +G+ID
Sbjct: 131 EG--TAIDIQIHAREILRLKDDLNNILSKHTGQSLEKIEKDTERDFFMNAQEALNYGLID 188
Query: 292 KVLWRGQETIMAE 304
KV+ E E
Sbjct: 189 KVITTKSEATAKE 201
>gi|404493314|ref|YP_006717420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
gi|90183182|sp|Q3A3X5.1|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
Length = 194
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L++A++++L+ DP+ I+LYINS G G
Sbjct: 19 DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ VG A M +LLAAG +GKRF +PHA+IMI QP
Sbjct: 70 VVTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMIHQPWGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+TL +LA HTG + E + R + M S AK++G++D
Sbjct: 130 QG--QATDINIHAQEILRLRETLNGVLASHTGQTLEKIATDTERDFFMGSEEAKKYGIVD 187
Query: 292 KVLWR 296
++ R
Sbjct: 188 DIVKR 192
>gi|154249786|ref|YP_001410611.1| ATP-dependent Clp protease proteolytic subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154153722|gb|ABS60954.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium nodosum Rt17-B1]
Length = 206
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 113/187 (60%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LVVA+L++L+ +P I LYINS G G
Sbjct: 30 DIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +KC+V T+ VG A M +LLAAG KGKRF +P+++IMI QP +
Sbjct: 81 LVTAGLAIYDTMQYVKCDVATICVGQAASMGAVLLAAGAKGKRFALPNSRIMIHQPLGGA 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A DV I KE + + + ++L+KHTG E + K R + M ++ A E+G+ID
Sbjct: 141 EG--SAKDVEILTKELLRIKRIINEILSKHTGQDIERIEKDTDRDFFMSAQEAMEYGIID 198
Query: 292 KVLWRGQ 298
KV+ G+
Sbjct: 199 KVIKPGE 205
>gi|56783783|dbj|BAD81195.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|125569868|gb|EAZ11383.1| hypothetical protein OsJ_01248 [Oryza sativa Japonica Group]
Length = 306
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 11/195 (5%)
Query: 109 PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +GE
Sbjct: 95 PPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTK-NGE 153
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTK------GKRFMMPHAKI 222
+G E+E FAIYD + +K + T+ VG A G A LLLAAG K K++ +
Sbjct: 154 KLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKVSVVFASKKYEDNDLIL 213
Query: 223 MI--QQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMD 280
+ QP G A+DV I KE + ++KLL++H G S E + + I+RP +
Sbjct: 214 LTFNVQPIGRFQG--QATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFS 271
Query: 281 SRRAKEFGVIDKVLW 295
A ++G+IDKVL+
Sbjct: 272 PSEAVDYGIIDKVLY 286
>gi|58038575|ref|YP_190539.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
gi|67460438|sp|Q5FUR3.1|CLPP1_GLUOX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|58000989|gb|AAW59883.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
Length = 215
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V+ L+ A+L+YL+ ++P I YINS G G
Sbjct: 32 DIFSRLLQERIIFLTGPVYDQVSSLICAQLLYLESVNPTKEISFYINSPG---------G 82
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++C V TV +G A M LLLA G KG R+ +P+A++M+ QP +
Sbjct: 83 VVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHRYALPNARVMVHQPSGGA 142
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E ++ R L ++ +HTG + E + + + R ++ + A+EFG+ID
Sbjct: 143 QG--QASDIEIQAREILIIRQRLNEIYREHTGQTLEQIEQKLERDSYLSANEAREFGLID 200
Query: 292 KVLWR 296
KV+ R
Sbjct: 201 KVVER 205
>gi|238926240|ref|ZP_04658000.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
gi|238885920|gb|EEQ49558.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
Length = 197
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 116/189 (61%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V ++VA++++L+ DP I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG A M +LL AG KGKR+ +PHA+IMI QP +
Sbjct: 65 VVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ ++LA+HTG + R M + AKE+G+ID
Sbjct: 125 QG--QSTDIQIQAKEILRLREVGNEILARHTGQDTAKINIDTERDNFMSAEEAKEYGLID 182
Query: 292 KVLWRGQET 300
+V+ R ++T
Sbjct: 183 EVVLRPKDT 191
>gi|384915524|ref|ZP_10015740.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Methylacidiphilum fumariolicum SolV]
gi|384527074|emb|CCG91611.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Methylacidiphilum fumariolicum SolV]
Length = 216
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ + LV+A+L++LQ DPK I LYI+S G G
Sbjct: 25 DIFSRLLKDRIVFIGTPIDDNIANLVIAQLLFLQMEDPKKDISLYIHSPG---------G 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V+T +G A MA +LLAAGTKGKRF +P+A+IMI QP +
Sbjct: 76 YVTAGMAIYDTMQFLSCDVNTYCIGQAASMAAVLLAAGTKGKRFALPNARIMIHQPLGGA 135
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L ++L+ HT E + K R + M + AK +G+ID
Sbjct: 136 QG--QASDISIQAQEILRTKRLLNEILSYHTKQPIERLEKDTDRDFFMSAEDAKAYGLID 193
Query: 292 KVL 294
+V+
Sbjct: 194 EVV 196
>gi|410726144|ref|ZP_11364388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
gi|410601390|gb|EKQ55905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
Length = 198
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++ L+VA+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSKLLKDRIIFLGEEVSDSIANLIVAQLIFLEAEDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +KC+V T+ VG A M LLA G GKRF + +A++MI QP +
Sbjct: 70 SVTAGFAIYDTMNYIKCDVSTICVGMAASMGAFLLAGGANGKRFALSNAEVMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+ + N+ L K+LA++TG S E + R M + AKE+G+ID
Sbjct: 130 KG--QASDIKIAAEHILKNKRNLNKILAENTGKSIEQIEVDTDRDNFMSADEAKEYGLID 187
Query: 292 KVLWR 296
V+ R
Sbjct: 188 GVMNR 192
>gi|172036826|ref|YP_001803327.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354554635|ref|ZP_08973939.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
gi|171698280|gb|ACB51261.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353553444|gb|EHC22836.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
Length = 199
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + A+ +VA L+YL DP PIYLYINS G G
Sbjct: 22 DIYTRLGQERIIFLGQEVNDAIANRIVALLLYLDSEDPSKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K EV T+ VG A M LLAAGT GKR +PHA+IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPHARIMIHQP-MGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G ASD+ I A E + R L ++LA G S E + K R Y M + AKE+G+ID
Sbjct: 132 TGRRQASDIEIEANEILRIRAQLNQILADKCGQSLEKIEKDTDRDYFMSAEEAKEYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|307107893|gb|EFN56134.1| hypothetical protein CHLNCDRAFT_56121 [Chlorella variabilis]
Length = 209
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 114/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + P+ ++ L+VA+L+YL+ +P+ PI LYINS G G
Sbjct: 17 DIYSRLLRERIVCVNGPIDDHLSNLIVAQLLYLESENPEKPISLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+AVG A MA LLLAAG G+R +PH+++M+ QP +
Sbjct: 68 VVTAGLAIYDTMQYIRCPVGTLAVGQAASMASLLLAAGEAGQRRSLPHSRVMVHQPSGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + R+ L L KHTG + + V + + R + M + A+EFG++D
Sbjct: 128 RG--QATDIAIAAKEILKMRELLNGLYVKHTGQTAQRVEEVLERDFFMSAPEAREFGIVD 185
Query: 292 KVL 294
+V+
Sbjct: 186 EVI 188
>gi|307152499|ref|YP_003887883.1| endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982727|gb|ADN14608.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 199
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA L+YL DP PIYLYINS G G
Sbjct: 22 DIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPNKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K EV T+ VG A M LLAAGT GKR +PH++IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPHSRIMIHQP-MGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G A+D+ I AKE + R L ++LA TG S E + K R Y M AKE+G+ID
Sbjct: 132 TGRRQATDIEIEAKEILRIRTQLNQMLADRTGKSIEQIEKDTDRDYFMSPYEAKEYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|326391008|ref|ZP_08212557.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392940442|ref|ZP_10306086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
gi|325992953|gb|EGD51396.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392292192|gb|EIW00636.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
Length = 195
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + LV+A+L++L+ DP I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ VG A MA LLAAG KGKRF +P+++IMI QP
Sbjct: 70 SITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGM 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + RD L K+LA++TG E + R + MD+ AK +G+ID
Sbjct: 130 QG--QATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEEAKAYGIID 187
Query: 292 KVLWRGQE 299
+VL R ++
Sbjct: 188 EVLIRNKK 195
>gi|405363134|ref|ZP_11026132.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397090077|gb|EJJ20963.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 203
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+ +G P+ V ++VA+L++L+ DP I LYINS G G
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ VG A M LLL AG KGKR+ +P+++IMI QP +
Sbjct: 69 SVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R + L+ KHTG++ E + K R Y M + A+++G+ID
Sbjct: 129 QG--QATDIDIQAKEILRLRSYINGLIVKHTGHTVERIEKDTERDYFMSAEDARQYGLID 186
Query: 292 KVLWR 296
+V+ +
Sbjct: 187 EVVEK 191
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease proteolytic subunit [Ammonifex degensii
KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 116/183 (63%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ + LV+A+L++L+ DP+ I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ +V T+ +G A MA LLAAG KGKR+ +P+A+IM+ QP
Sbjct: 72 LVTAGMAIYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYALPYARIMLHQPLGGF 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A++V I A+E M R L +LL+KHTG E + + R + M +++AK++G+ID
Sbjct: 132 QG--QATEVEIHAREIMRMRQVLNELLSKHTGQPVEKIAQDTDRDFFMTAQQAKDYGLID 189
Query: 292 KVL 294
+V+
Sbjct: 190 EVI 192
>gi|338532521|ref|YP_004665855.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|337258617|gb|AEI64777.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 203
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+ +G P+ V ++VA+L++L+ DP I LYINS G G
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ VG A M LLL AG KGKR+ +P+++IMI QP +
Sbjct: 69 SVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R + L+ KHTG++ E + K R Y M + A+++G+ID
Sbjct: 129 QG--QATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQYGLID 186
Query: 292 KVLWR 296
+V+ +
Sbjct: 187 EVVEK 191
>gi|224367556|ref|YP_002601719.1| protein ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0.1|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 117/195 (60%), Gaps = 11/195 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L+VA+L++L+ DP+ I YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G A+YDT+ +K +V TV +G A M LLLAAG KGKRF +P+++IMI QP +
Sbjct: 70 VVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A E + ++ L +L+KHTG + + +++ R + M +AKE+G++D
Sbjct: 130 QG--QASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVD 187
Query: 292 KVLWRGQETIMAEVA 306
V+ E AE A
Sbjct: 188 HVVASRDELEKAEAA 202
>gi|374339257|ref|YP_005095993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
gi|372100791|gb|AEX84695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
Length = 198
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 117/203 (57%), Gaps = 17/203 (8%)
Query: 92 PAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKA 151
P VE S Y D+ S LL RI+++G + V+ L+VA++++L+ DP+
Sbjct: 6 PVVVESSGRYER------AYDIYSRLLKDRIIFLGSEVNDYVSNLIVAQMLFLEAQDPEK 59
Query: 152 PIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTK 211
IYLYINS G G + G AIYDT+ +K +V T+ +G A M +LL AG K
Sbjct: 60 DIYLYINSPG---------GSITAGLAIYDTMQYIKPDVSTICIGQAASMGAVLLTAGAK 110
Query: 212 GKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTK 271
GKRF +P+++IMI QP + G A D+ I+A+E + + L K+L++HTG + K
Sbjct: 111 GKRFALPNSRIMIHQPWGGAQG--TAKDIEIQAQEILRMKKMLNKILSEHTGKDVSQIEK 168
Query: 272 TIRRPYHMDSRRAKEFGVIDKVL 294
R + M + AKE+G+IDKV+
Sbjct: 169 DADRDFFMSAEEAKEYGLIDKVI 191
>gi|428774108|ref|YP_007165896.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688387|gb|AFZ48247.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 238
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + + VVA+L+YL+ DPK IY+YINS G G
Sbjct: 47 DVYSRLLRERIIFLGTAIDDKLADSVVAQLLYLEAEDPKKDIYIYINSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LLA G KGKR +P+++IMI QP +
Sbjct: 98 SVYSGMAIYDTMQQIEPDVSTICYGIAASMGAFLLAGGAKGKRLGLPNSRIMIHQPLGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + + L ++L HTG E +++ R ++M S AKE+G+ID
Sbjct: 158 QG--QASDIEIQAKEILYIKQRLNEILTHHTGQPFERISEDTERDFYMSSTEAKEYGIID 215
Query: 292 KVLWR 296
++ R
Sbjct: 216 DIILR 220
>gi|421527266|ref|ZP_15973870.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
gi|402256700|gb|EJU07178.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
Length = 193
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 23/213 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V ++A+L+YL
Sbjct: 3 NPTVIDNNGKSERAY------------DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP+ I +YINS G G ++G AIYDT+ +K +V TV VG A M
Sbjct: 51 EAEDPEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAF 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LLAAG KGKRF + +++IMI QP L S GL A+D+ I A E + +D L +LLAK+TG
Sbjct: 102 LLAAGAKGKRFALENSRIMIHQP-LISGGLKGQATDISIHANELLKIKDKLAELLAKNTG 160
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++E + + R ++ S A +G+IDKV R
Sbjct: 161 KTKEQILRDTERDNYLSSEEAVNYGLIDKVFRR 193
>gi|410582587|ref|ZP_11319693.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermaerobacter subterraneus DSM 13965]
gi|410505407|gb|EKP94916.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermaerobacter subterraneus DSM 13965]
Length = 199
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ V V+A+L++LQ DP I +YINS G + D
Sbjct: 19 DIYSRLLKDRIVFIGTPIDDVVANSVIAQLLFLQTDDPDRDISIYINSPGGSVD------ 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ +K +V T VG A M +LLA GTKGKR+ +PH++IMI QP
Sbjct: 73 ---SGLAIYDTMQHIKPDVATYCVGLAASMGAILLAGGTKGKRYALPHSRIMIHQPHSQV 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+DV I A + + R ++LAKHTG E + + R + M + AKE+G+ID
Sbjct: 130 GG--TAADVKIYADQLLKLRQVANEILAKHTGQPLERIERDTERDFFMTAEEAKEYGIID 187
Query: 292 KVL 294
VL
Sbjct: 188 HVL 190
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|3023519|sp|O30612.1|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+ +G P+ V ++VA+L++L+ DP I LYINS G G
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ VG A M LLL AG KGKR+ +P+++IMI QP +
Sbjct: 69 SVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R + L+ KHTG++ E + K R Y M + A+++G+ID
Sbjct: 129 QG--QATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQYGLID 186
Query: 292 KVLWR 296
+V+ +
Sbjct: 187 EVVEK 191
>gi|334128684|ref|ZP_08502565.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
gi|333386421|gb|EGK57635.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
Length = 203
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V +VVA+L++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL AG GKR+ +PHA+IMI QP +
Sbjct: 71 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ +LA+HTG E + R M + AKE+G+ID
Sbjct: 131 QG--QSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKEYGLID 188
Query: 292 KVLWR 296
+V+ R
Sbjct: 189 EVVTR 193
>gi|292670226|ref|ZP_06603652.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
gi|292648178|gb|EFF66150.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
Length = 197
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V +VVA++++L+ DP I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL AG KGKR+ +PHA+IMI QP +
Sbjct: 65 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ +LA+HTG E+ + R M + AK +G+ID
Sbjct: 125 QG--QSTDIQIQAKEILRLREVGNHILARHTGQDEKKINVDTERDNFMSAEEAKAYGLID 182
Query: 292 KVLWR 296
+V+ R
Sbjct: 183 EVVTR 187
>gi|296134054|ref|YP_003641301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
gi|296032632|gb|ADG83400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
Length = 194
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V LV+A++++L+ DP I++YINS G G
Sbjct: 19 DIYSRLLKDRIIFIGGPIDDMVANLVIAQMLFLEAEDPDKDIHIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LLAAGTKGKR+ +P+ +IMI QP
Sbjct: 70 VVTAGMAIYDTMQYIKPDVSTICMGQAASMGSFLLAAGTKGKRYALPYTRIMIHQPLGGV 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + + L +LLAKHTG E + + R + M + A+++G++D
Sbjct: 130 QG--QATDIDIHAKEILRMKSVLNELLAKHTGQPVEVIARDTERDFFMSAEEARKYGIVD 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|255565556|ref|XP_002523768.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223536980|gb|EEF38617.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 296
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 118/202 (58%), Gaps = 11/202 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ +VVA+L++L+ +P PI++Y+NS G G
Sbjct: 103 DIFSRLLKERIVCINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPG---------G 153
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ ++T+ +G A MA LLLAAG KG+R +P+A IMI QP
Sbjct: 154 QVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERKSLPNATIMIHQPSGGY 213
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A D+ I K+ + D+L +L +KHTG S + + K + R Y M AKEFG+ID
Sbjct: 214 SG--QAKDMTIHTKQIVRVWDSLNQLYSKHTGQSVDVIQKNMDRDYFMTPEEAKEFGIID 271
Query: 292 KVLWRGQETIMAEVAPPEEWDK 313
+V+ + T++A+ E DK
Sbjct: 272 EVIDQRPMTLVADAVGSEGKDK 293
>gi|217077313|ref|YP_002335031.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus TCF52B]
gi|419759889|ref|ZP_14286174.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
gi|217037168|gb|ACJ75690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
africanus TCF52B]
gi|407514928|gb|EKF49714.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
Length = 201
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V LVVA+L++L+ DP I LYINS G G
Sbjct: 24 DIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +KC+V T+ +G A M +LLA GTKGKRF +P+++IMI QP +
Sbjct: 75 SVSAGLAIYDTMQYIKCDVATICIGQAASMGAVLLAGGTKGKRFSLPNSRIMIHQPLGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G PA DV I KE + ++ + ++L+ HTG E + K R + M A E+G+ID
Sbjct: 135 EG--PAKDVEIMTKELLRIKNKINEILSFHTGQPIERIEKDTDRDFFMTPEEALEYGLID 192
Query: 292 KVL 294
KV+
Sbjct: 193 KVI 195
>gi|167038050|ref|YP_001665628.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040915|ref|YP_001663900.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
sp. X514]
gi|256752437|ref|ZP_05493296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300914951|ref|ZP_07132267.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307723815|ref|YP_003903566.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|320116459|ref|YP_004186618.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|226706551|sp|B0KBA4.1|CLPP_THEP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706552|sp|B0K533.1|CLPP_THEPX RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166855155|gb|ABY93564.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X514]
gi|166856884|gb|ABY95292.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748706|gb|EEU61751.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300889886|gb|EFK85032.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307580876|gb|ADN54275.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|319929550|gb|ADV80235.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 195
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 112/187 (59%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + LV+A+L++L+ DP I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ VG A MA LLAAG KGKRF +P+++IMI QP
Sbjct: 70 SITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGM 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + RD L K+LA++TG E + R + MD+ AK +G+ID
Sbjct: 130 QG--QATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDAKAYGIID 187
Query: 292 KVLWRGQ 298
+VL R +
Sbjct: 188 EVLIRNK 194
>gi|115374393|ref|ZP_01461676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|310824399|ref|YP_003956757.1| ATP-dependent CLP protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
gi|115368595|gb|EAU67547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|309397471|gb|ADO74930.1| ATP-dependent Clp protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
Length = 200
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 115/185 (62%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+ +G+P+ V +VVA++++L+ DP+ I +YINS G G
Sbjct: 18 DLYSRLLKDRIIMLGVPINDEVANVVVAQMLFLESEDPEKGINIYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ VG A M LLL AG+KGKR+ +P+A+IMI QP +
Sbjct: 69 SVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGSKGKRYALPNARIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L ++ KHTG++ E + K R Y M + A+++G+ID
Sbjct: 129 QG--QATDIDIQAKEILRLKAYLNGIIVKHTGHTIERIEKDTERDYFMSADDARQYGIID 186
Query: 292 KVLWR 296
+V+ +
Sbjct: 187 EVVVK 191
>gi|291543930|emb|CBL17039.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus
champanellensis 18P13]
Length = 196
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+ + + LVVA+L+YL+ DP I LYINS G G
Sbjct: 19 DIFSRLLNDRIIMLSEDVNDTTASLVVAQLLYLESQDPDKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC+V T+ +G A M LL++G KGKRF +P+++IMI QP +
Sbjct: 70 SVSAGFAIYDTMQYIKCDVSTICIGLAASMGAFLLSSGAKGKRFALPNSEIMIHQPLIGG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL A+D+ IR + + ++ L ++L+++TG S E + + R M + A E+G+I
Sbjct: 130 GGLSGQATDIQIRTENLLRTKENLNRILSENTGKSIEDIRRDTDRDNFMTANEAMEYGLI 189
Query: 291 DKVLWR 296
DKV+ +
Sbjct: 190 DKVIAK 195
>gi|2245061|emb|CAB10484.1| Clp proteinase like protein [Arabidopsis thaliana]
gi|7268455|emb|CAB80975.1| Clp proteinase like protein [Arabidopsis thaliana]
Length = 241
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
+ PPPDL S L RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-N 158
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GE +G ++E FAIYD + +K + T+ VG A G A LLL AG KG R +P + IMI+Q
Sbjct: 159 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 218
>gi|338729930|ref|YP_004659322.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
gi|335364281|gb|AEH50226.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
Length = 202
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ LVVA+L++L+ DP I+LYINS G G
Sbjct: 25 DIYSRLLKDRIVFLGYPIDDHTANLVVAQLLFLEAEDPDKDIHLYINSPG---------G 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ +G A MA +LLA+GTKGKR+ +P+A+IM+ QP +
Sbjct: 76 SVTAGLAIYDTMQYVKCDVVTICIGQAASMAAVLLASGTKGKRYALPNARIMLHQPLGGA 135
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G P DV I KE + ++ + K+L++ TG E + K R + MD+ A +G+ID
Sbjct: 136 EG--PVKDVEIITKELLRIKNLINKILSEKTGQPIERIEKDTDRDFFMDAYEALNYGLID 193
Query: 292 KVL 294
KV+
Sbjct: 194 KVI 196
>gi|237755491|ref|ZP_04584113.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692355|gb|EEP61341.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 201
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ + LVVA+L++L+ DP IY+YINS G G
Sbjct: 24 DIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LL+AG KGKR+ +P+A+IMI QP
Sbjct: 75 VVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARIMIHQPLGGF 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + + L + LAKHTG E + R Y M + AKE+G+ID
Sbjct: 135 QG--QATDIEIHAKEILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKEYGLID 192
Query: 292 KVLWRGQE 299
KV+++ E
Sbjct: 193 KVIYKRGE 200
>gi|218439262|ref|YP_002377591.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
7424]
gi|218171990|gb|ACK70723.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 199
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA L+YL DP PIYLYINS G G
Sbjct: 22 DIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPNKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K EV T+ VG A M LLAAGT GKR +PH++IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKSEVVTICVGLAASMGSFLLAAGTPGKRLALPHSRIMIHQP-MGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G A+D+ I AKE + R L ++LA+ TG + E + K R Y M A+E+G+ID
Sbjct: 132 TGRRQATDIEIEAKEILRIRQQLNQMLAERTGKTLEQIEKDTDRDYFMSPYEAQEYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|170077811|ref|YP_001734449.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
PCC 7002]
gi|169885480|gb|ACA99193.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 199
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++G + A+ ++A ++YL DP PIYLYINS G G + G
Sbjct: 27 LYRERIIFLGRGVNDALANQIIAIMLYLDSEDPSKPIYLYINSPG---------GSVTAG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K EV T+ VG A M LL+AGTKGKR +PH++IMI QP G
Sbjct: 78 LAIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQPLGGIQGRRQ 137
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I AKE + + L +L+A HTG S E + K R Y M ++ A E+G+IDKV+
Sbjct: 138 ATDIDIEAKEIIRIKHQLNELMAAHTGQSIEKIEKDTDRDYFMSAQEALEYGLIDKVI 195
>gi|152989915|ref|YP_001355637.1| ATP-dependent Clp protease proteolytic subunit [Nitratiruptor sp.
SB155-2]
gi|166201830|sp|A6Q1C1.1|CLPP_NITSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151421776|dbj|BAF69280.1| ATP-dependent Clp protease, proteolytic subunit [Nitratiruptor sp.
SB155-2]
Length = 196
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 114/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + AV +VA+L++L+ DP IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGEINDAVASSIVAQLLFLEAEDPDKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ +K +V T+ +G A M LL++GTKGKR+ +PHA+IMI QP +
Sbjct: 71 VITSGMSIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L ++LA++TG S + + K R + M S AKE+G+ID
Sbjct: 131 QG--QATDIEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEEAKEYGLID 188
Query: 292 KVLWR 296
+VL +
Sbjct: 189 QVLEK 193
>gi|188585728|ref|YP_001917273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|259585960|sp|B2A158.1|CLPP_NATTJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179350415|gb|ACB84685.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 197
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG + + V+A++++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ ++ +V T+ VG A M +LLAAG +GKRF +P+++IM+ QP +
Sbjct: 70 HVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQPMGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+DV I A+E M ++ L ++LA HTG E ++K R + M S A+++GVID
Sbjct: 130 QG--QAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKYGVID 187
Query: 292 KVLWR 296
VL R
Sbjct: 188 DVLKR 192
>gi|406937069|gb|EKD70636.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 207
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++G P+ V L+VA+L++L+ +P I +YINS G G
Sbjct: 29 DIYSRLLKDRVIFLGGPIDDYVANLIVAQLLFLESENPDKDISIYINSPG---------G 79
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LLLAAGT GKR+ +P+A++MI QP
Sbjct: 80 VVTAGLAIYDTIQFIKPAVSTMCIGQAASMGALLLAAGTAGKRYCLPNARVMIHQPLGGV 139
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R L ++LA HTG SEE ++K R M + +A ++G++D
Sbjct: 140 QG--QASDIAIHAEETLKIRTRLNQILAHHTGQSEEVISKDTDRDNFMSADKAHKYGIVD 197
Query: 292 KVL 294
K+L
Sbjct: 198 KIL 200
>gi|336424669|ref|ZP_08604704.1| Clp protease [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336014202|gb|EGN44059.1| Clp protease [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 217
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 10/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + EL+VA+L++L+ DP+ I LYINS G G
Sbjct: 38 DIMSRLLSDRIIFLGTQVDDVSAELIVAQLLFLESQDPEKDIQLYINSPG---------G 88
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +KC+V TV +G A +LLA GTKGKR +P+A+IMI Q +
Sbjct: 89 SITAGFAIYDTMQYIKCDVSTVCIGMAASFGAVLLAGGTKGKRMALPNAEIMIHQAAISG 148
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+G+ PASD+ I + + ++++LA+ TG +EE + R Y+M + A E+G+I
Sbjct: 149 NGIQGPASDIKILSDHMQRSNQRVIRILAESTGKTEEELKADTDRDYYMSAAEALEYGMI 208
Query: 291 DKVL 294
D++
Sbjct: 209 DQIF 212
>gi|428222327|ref|YP_007106497.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427995667|gb|AFY74362.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 198
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V+ LVVA+L++L+ DP+ I++YINS G G
Sbjct: 17 DIFSRLLRERIVFLGTAIDDNVSNLVVAQLLFLEAEDPEKDIFIYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ VG A M LLA GTKGKR +PH +IMI QP +
Sbjct: 68 SVTAGMAIYDTMQHIRPDVSTICVGLAASMGAFLLAGGTKGKRLSLPHTRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + +++ L +LLA HTG S E + R + M + A+ +G+ID
Sbjct: 128 QG--QATDIEIQAKEILYHKNRLNELLAFHTGRSLEEIGNDTDRDFFMSAVEAQAYGLID 185
Query: 292 KVLWR 296
+V+ +
Sbjct: 186 QVVVK 190
>gi|55980584|ref|YP_143881.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus HB8]
gi|381190341|ref|ZP_09897864.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp. RL]
gi|384430811|ref|YP_005640171.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus SG0.5JP17-16]
gi|386360877|ref|YP_006059122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus JL-18]
gi|60389682|sp|Q72L15.2|CLPP_THET2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460210|sp|Q5SKM8.1|CLPP_THET8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|55771997|dbj|BAD70438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus HB8]
gi|333966279|gb|AEG33044.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus SG0.5JP17-16]
gi|380451934|gb|EIA39535.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp. RL]
gi|383509904|gb|AFH39336.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus JL-18]
Length = 194
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VVA+L++L +P I LYINS G D
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSPGGEVD------ 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ ++ V T+ +G A MA ++LAAG KG+R+ +PHAK+MI QP
Sbjct: 72 ---AGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGV 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L ++LAKHTG E V K R Y++ ++ A E+G+ID
Sbjct: 129 RG--TASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLID 186
Query: 292 KVLWR 296
+V+ R
Sbjct: 187 QVVTR 191
>gi|46198558|ref|YP_004225.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus HB27]
gi|46196180|gb|AAS80598.1| ATP-dependent clp protease proteolytic subunit [Thermus
thermophilus HB27]
Length = 212
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VVA+L++L +P I LYINS G D
Sbjct: 36 DIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSPGGEVD------ 89
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ ++ V T+ +G A MA ++LAAG KG+R+ +PHAK+MI QP
Sbjct: 90 ---AGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGV 146
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L ++LAKHTG E V K R Y++ ++ A E+G+ID
Sbjct: 147 RG--TASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLID 204
Query: 292 KVLWR 296
+V+ R
Sbjct: 205 QVVTR 209
>gi|398347022|ref|ZP_10531725.1| ATP-dependent Clp protease proteolytic subunit [Leptospira broomii
str. 5399]
Length = 198
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + +V+A+L++L +P IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ VG A MA LLLA G KGKR +PH++IM+ QP +
Sbjct: 70 YVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRIMMHQPTGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G ASD+ I+AKE + ++ L L KHTG S E + K R +M + A+ +G+ID
Sbjct: 130 TG--QASDIAIQAKEVLKLKEVLNGLYTKHTGKSMEQIQKDTERDLYMTAEEAQTYGIID 187
Query: 292 KVL 294
V+
Sbjct: 188 SVI 190
>gi|365873788|ref|ZP_09413321.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
gi|363983875|gb|EHM10082.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
Length = 194
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG + + LVVA+L++L+ DP +YLYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGQEIDDHLANLVVAQLLFLESEDPDKDVYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +KC V T+ G A MA +LLAAG +GKR +PH++IMI QP +
Sbjct: 71 VVTAGLAIYDTMQYIKCPVSTICTGQAASMAAVLLAAGERGKRISLPHSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + ++ L +L+ HTG E + + R + M + A +G++D
Sbjct: 131 QG--QASDIEIQAREILRVKEILNSILSNHTGQPLERIARDTDRDFFMSADEACAYGIVD 188
Query: 292 KVLWR 296
KV+ +
Sbjct: 189 KVIEK 193
>gi|389578265|ref|ZP_10168292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
gi|389399900|gb|EIM62122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
Length = 208
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L+VA++++L+ DP I YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDEVANLIVAQMLFLESEDPDKDINFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V TV +G A M LLL AGT GKRF +P+A+IMI QP +
Sbjct: 70 VVTAGMAIYDTIQYIKPDVATVCIGQAASMGALLLTAGTAGKRFALPNARIMIHQPMGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A E + +D L ++L+KHTG + E V R + M ++A E+G++D
Sbjct: 130 QG--QATDIKIQATEILRMKDVLNEILSKHTGQNIERVAADTERDFFMSGQQALEYGIVD 187
Query: 292 KVL 294
+V+
Sbjct: 188 RVV 190
>gi|345017119|ref|YP_004819472.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344032462|gb|AEM78188.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 195
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + LV+A+L++L+ DP I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ VG A MA LLAAG KGKRF +P+++IMI QP
Sbjct: 70 SITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGM 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + RD L K+LA++TG E + R + MD+ AK +G+ID
Sbjct: 130 QG--QATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDAKAYGIID 187
Query: 292 KVLWRGQE 299
+VL R ++
Sbjct: 188 EVLVRKKK 195
>gi|195952528|ref|YP_002120818.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
gi|195932140|gb|ACG56840.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
Length = 205
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G P+ V L+VA+L++L+ DP+ I +YINS G G
Sbjct: 30 DIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQMYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M +LLAAGTKGKRF +P+A+IMI QP
Sbjct: 81 SVTAGLAIYDTMQYIKPDVTTICIGQAASMGAVLLAAGTKGKRFALPNARIMIHQPLGGV 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+LI A+E + L +LA TG + + K + R Y M + AK +G+ID
Sbjct: 141 QG--QATDILIHAEEIKRIKHILNTILANATGKNLRQIEKDVDRDYFMSAEEAKNYGLID 198
Query: 292 KVLWR 296
KV+ +
Sbjct: 199 KVITK 203
>gi|125525351|gb|EAY73465.1| hypothetical protein OsI_01344 [Oryza sativa Indica Group]
Length = 284
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 123/199 (61%), Gaps = 9/199 (4%)
Query: 109 PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
PPPDL S L RIVY+GM L+P+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +GE
Sbjct: 73 PPPDLASFLYKYRIVYLGMCLLPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTK-NGE 131
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTK------GKRFMMPHAKI 222
+G E+E FAIYD + +K + T+ VG A G A LLLAAG K K++ +
Sbjct: 132 KLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKVSVVFASKKYEDNDLIL 191
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
+ + A+DV I KE + ++KLL++H G S E + + I+RP +
Sbjct: 192 LTFNVQPIGRFQGQATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFSPS 251
Query: 283 RAKEFGVIDKVLW--RGQE 299
A ++G+IDKVL+ + QE
Sbjct: 252 EAVDYGIIDKVLYNEKSQE 270
>gi|333372559|ref|ZP_08464484.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332972924|gb|EGK10866.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 206
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + AV +VA++++LQ DP I LYINS G G
Sbjct: 31 DIYSRLLKDRIIFLGSEINDAVANTIVAQMLFLQTEDPNKDIQLYINSPG---------G 81
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC++ T+ +G A M LL++GTKGKR +P++++MI QP +
Sbjct: 82 SISAGFAIYDTMQHVKCDIQTICIGMAASMGAFLLSSGTKGKRLALPNSEVMIHQPLGGA 141
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + RD L +LL+ TG + + + R + M + AK++G+ID
Sbjct: 142 QG--QASDIEISAKRILRMRDRLNQLLSDQTGQPLKKIQQDTDRDHFMSAEDAKKYGLID 199
Query: 292 KVL 294
K++
Sbjct: 200 KII 202
>gi|113475211|ref|YP_721272.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110166259|gb|ABG50799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 203
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+Y+G + + L+V +L+YL DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G IYDT+ ++ +V T+ +G A M LL+ GTKGKR +PH++IMI QP +
Sbjct: 68 SVSAGMGIYDTMRHVRPDVCTICMGIAASMGAFLLSGGTKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L + LA+HTG S E +T+ R + M + A E+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKKYLNECLAEHTGQSIEKITEDTERDFFMSATEAMEYGIID 185
Query: 292 KVLWR 296
+V R
Sbjct: 186 QVYNR 190
>gi|357031709|ref|ZP_09093652.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
morbifer G707]
gi|356414939|gb|EHH68583.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
morbifer G707]
Length = 204
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V+ L+ A+L+YL+ ++P I YINS G G
Sbjct: 22 DIYSRLLQERIIFLTGPVYDQVSSLICAQLLYLESVNPTKEISFYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++C V TV +G A M LLLA G K R+ +P+A++M+ QP +
Sbjct: 73 VVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKNHRYALPNARVMVHQPSGGA 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E ++ R L ++ +HTG + E + + + R ++ + AKEFG+ID
Sbjct: 133 QG--QASDIEIQAREILIIRQRLNEIYREHTGQTLEQIERKLERDSYLSAEEAKEFGLID 190
Query: 292 KVLWR 296
+V+ R
Sbjct: 191 EVVRR 195
>gi|443327406|ref|ZP_21056031.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442792934|gb|ELS02396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 201
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + ++ LVVA+L+YL+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVTDEISNLVVAQLLYLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G ++DT+ Q++ +V T+ +G A M LL+AG KGKR +P+++IMI QP +
Sbjct: 68 SVSAGMGMFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L + LA HTG + + R + M S AKE+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKNKLNQHLADHTGQPLSTIEEDTERDFFMSSEEAKEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVITR 190
>gi|256544468|ref|ZP_05471841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
vaginalis ATCC 51170]
gi|256399793|gb|EEU13397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
vaginalis ATCC 51170]
Length = 195
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 114/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V+++++A+L++L+ DP I YINS G G
Sbjct: 23 DIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQDPNKDIQFYINSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL++G KGKRF +P++ I+I QP +
Sbjct: 74 VVTAGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLPNSNILIHQPSGGA 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A++ + + L K+LA +TG S E + K R + MD+ AKE+G+ID
Sbjct: 134 QG--QASDIQIQAEQILKMKKRLNKILADNTGQSIEKIQKDTDRDFAMDAYEAKEYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|392954369|ref|ZP_10319921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrocarboniphaga effusa AP103]
gi|391858268|gb|EIT68798.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrocarboniphaga effusa AP103]
Length = 193
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 115/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++I P+ + +VVA++++L+ +P I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFIVGPIDDYMANIVVAQMLFLESENPDKDIHLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ +K +V T+ +G A M LL+AGTKGKR+ +PH++IMI QP +
Sbjct: 65 IITAGLSIYDTMKFIKPDVATMCIGQAASMGAFLLSAGTKGKRYSLPHSRIMIHQPSGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+DV I+AKE + R+ L KL+A HTG E + K + R Y M + A+++G+ID
Sbjct: 125 QG--TAADVEIQAKEILYLRERLNKLMADHTGQPIERIAKDVERDYFMSAEAARDYGMID 182
Query: 292 KVL 294
++L
Sbjct: 183 RIL 185
>gi|410666834|ref|YP_006919205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
gi|409104581|gb|AFV10706.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
Length = 201
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V +++A++++L+ DP+ IYLYINS G G
Sbjct: 23 DIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEKDIYLYINSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ VG A M LLAAG K KRF P+++IMI QP +
Sbjct: 74 SITAGLAIFDTMRYVKPDVSTICVGMAASMGAFLLAAGAKKKRFATPNSEIMIHQPMGGA 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+DV I A+ + RD L ++LA+ TG S E +++ R MD+ AKE+G+ID
Sbjct: 134 QG--QATDVEIHARRIVKVRDRLNRILAELTGQSVERISRDTDRDTFMDAEEAKEYGIID 191
Query: 292 KVL 294
+V+
Sbjct: 192 EVI 194
>gi|428771131|ref|YP_007162921.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685410|gb|AFZ54877.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 239
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + + +VA+L+YL+ DP+ IY+YINS G G
Sbjct: 48 DIYSRLLRERIIFLGTAIDDKLADSIVAQLLYLEADDPEKDIYIYINSPG---------G 98
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q+K +V T+ G A M LL+ G KGKR +P+++IMI QP +
Sbjct: 99 SVYAGMAIYDTMQQIKPDVSTICYGIAASMGAFLLSGGAKGKRLGLPNSRIMIHQPLGGA 158
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + ++ L +LLA HTG E ++ R ++M S A+E+G+ID
Sbjct: 159 QG--QASDIEIQAKEILYIKNKLNQLLADHTGQPLEKISLDTERDFYMSSTEAQEYGLID 216
Query: 292 KVLWR 296
+V+ R
Sbjct: 217 EVIIR 221
>gi|374849800|dbj|BAL52805.1| ATP-dependent Clp protease, proteolytic subunit ClpP [uncultured
prokaryote]
Length = 201
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V LV+AEL++L+ DP I +YIN+ G G
Sbjct: 25 DIYSRLLKDRIIFLGEPIDDQVANLVIAELLFLEKEDPDKDIDMYINTPG---------G 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ +K +V T+ VG A M +LLA GT GKR+ +PHA+IMI Q
Sbjct: 76 IVSAGLAIYDTMQAIKPDVATICVGQAASMGAVLLAGGTPGKRYALPHARIMIHQVHAGF 135
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + +D L +L KHTG E + + R Y M ++ A E+G+ID
Sbjct: 136 QG--TAIDIEIQAREVLRYKDILNNILHKHTGQPLERIEQDTARDYFMSAKEALEYGIID 193
Query: 292 KVLWR 296
+L R
Sbjct: 194 HILDR 198
>gi|336401433|ref|ZP_08582202.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
gi|336161020|gb|EGN64036.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
Length = 193
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 122/213 (57%), Gaps = 23/213 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V ++A+L+YL
Sbjct: 3 NPTVIDNNGKSERAY------------DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP+ I +YINS G G ++G AIYDT+ +K +V TV VG A M
Sbjct: 51 EAEDPEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAF 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LLAAG KGKRF + +++IMI QP L S GL A+D+ I A E + +D L +LLAK+TG
Sbjct: 102 LLAAGAKGKRFALENSRIMIHQP-LISGGLKGQATDISIHANELLKIKDRLAELLAKNTG 160
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++E + + R ++ S+ A +G+ID V R
Sbjct: 161 KTKEQILRDTERDNYLSSKEAVNYGLIDSVFRR 193
>gi|310641963|ref|YP_003946721.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386040947|ref|YP_005959901.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309246913|gb|ADO56480.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343096985|emb|CCC85194.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 194
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 117/209 (55%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
P ++ AQ ERS D+ S LL RIV++G + + ++A+L++L
Sbjct: 6 PYVVEQTAQGERSY------------DIYSRLLKDRIVFVGATIDDQLANSIIAQLLFLA 53
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP+ IY+YINS G G S GFAIYDT+ +K EVHT+ G A +L
Sbjct: 54 AEDPEKDIYMYINSPG---------GSTSAGFAIYDTMQYIKPEVHTICTGFAASFGAIL 104
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L AG KGKR +P+++IMI QP + G ASD+ I AK + R+ ++ A+ TG S
Sbjct: 105 LLAGAKGKRSALPNSEIMIHQPHGGAQG--QASDIAISAKRILWTREKATRITAERTGQS 162
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E V K + R ++M ++ A E+GVID+V+
Sbjct: 163 FEKVEKDMDRDFYMSAQEALEYGVIDQVI 191
>gi|410697314|gb|AFV76382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
oshimai JL-2]
Length = 194
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V VVA+L++L +P I LYINS G D
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANTVVAQLLFLDAQNPNQEIRLYINSPGGEVD------ 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ ++ V T+ +G A MA ++LAAG KG+R+ +PHAK+MI QP +
Sbjct: 72 ---AGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L ++LAKHTG E V + R Y++ ++ A E+G+ID
Sbjct: 129 RG--TASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVERDTDRDYYLSAKEALEYGLID 186
Query: 292 KVLWR 296
+V+ R
Sbjct: 187 QVVTR 191
>gi|317123029|ref|YP_004103032.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter marianensis DSM 12885]
gi|315593009|gb|ADU52305.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter marianensis DSM 12885]
Length = 199
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ V V+A+L++LQ DP I +YINS G + D
Sbjct: 19 DIYSRLLKDRIVFIGTPIDDVVANSVIAQLLFLQTDDPDRDISIYINSPGGSVD------ 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ +K +V T VG A M +LLA GTKGKR+ +PH++IMI QP
Sbjct: 73 ---SGLAIYDTMQHIKPDVATYCVGLAASMGAILLAGGTKGKRYALPHSRIMIHQPHSQV 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASDV I A + + R ++LAKHTG E + + R + M + AK +G+ID
Sbjct: 130 GG--TASDVKIYADQLLKLRQVANEILAKHTGQPLERIERDTERDFFMTAEEAKAYGIID 187
Query: 292 KVL 294
VL
Sbjct: 188 HVL 190
>gi|402817756|ref|ZP_10867343.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
gi|402504728|gb|EJW15256.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
Length = 192
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + ++ +VA+L+ L D IY+YINS G G
Sbjct: 20 DIYSRLLKDRIVFVGSEITDSLANSIVAQLLLLAAEDSDKDIYMYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GF IYDT+ +K +VHT+ G A +LL AG KGKRF +P+++IMI QP +
Sbjct: 71 SVTAGFGIYDTMQYIKPQVHTICTGLAASYGSILLLAGAKGKRFALPNSEIMIHQPHGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + R+ LV+L+A HTG E + K + R Y M + A E+G+ID
Sbjct: 131 QG--QASDIAISAKRILKMRERLVQLMADHTGQPVERIEKDMDRDYFMSAEEALEYGIID 188
Query: 292 KVL 294
K+L
Sbjct: 189 KIL 191
>gi|411119403|ref|ZP_11391783.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711266|gb|EKQ68773.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 229
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 17/221 (7%)
Query: 76 TLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTE 135
+L L++Y T P +E++ D+ S LL RIV++G P+ AV +
Sbjct: 13 SLNSLEVYSLATDTVIPVVIEQAGRGER------AFDIYSRLLRERIVFLGTPIDDAVAD 66
Query: 136 LVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAV 195
VVA+L++L+ DP+ I LYINS G G + G AIYDT+ Q++C+V T+
Sbjct: 67 SVVAQLLFLEAEDPEKDIQLYINSPG---------GSVTAGMAIYDTMQQVRCDVATICF 117
Query: 196 GAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLV 255
G A M LLA+GT GKR +P +++MI QP + G A D+ I+AKE + ++ L
Sbjct: 118 GLAASMGAFLLASGTTGKRMSLPSSRVMIHQPLGGAQG--QAVDIEIQAKEILYHKRKLN 175
Query: 256 KLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
+LL+ HT E + R + M + AKE+G+ID+V+ R
Sbjct: 176 ELLSYHTRQPFEKIEADTERDFFMSAAEAKEYGLIDQVISR 216
>gi|444911057|ref|ZP_21231233.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444718395|gb|ELW59208.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 201
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RIV +G P+ V ++VA+L++L+ DP I LYINS G G
Sbjct: 18 DLYSRLLKDRIVMLGTPVNDDVANIIVAQLLFLESEDPDKGISLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ +G A M LLL AG+ GKR+ +P+++IMI QP +
Sbjct: 69 SVTAGLAIYDTMQYVKCPVSTICIGQAASMGALLLLAGSPGKRYALPNSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + R + L KHTG++ E + K R Y M + A+++G+ID
Sbjct: 129 QG--QASDIDIQAKEILRLRSYINGLFVKHTGHNIERIEKDTERDYFMSAEEARQYGLID 186
Query: 292 KVLWR 296
+V+ +
Sbjct: 187 EVVSK 191
>gi|94264491|ref|ZP_01288278.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|94266601|ref|ZP_01290283.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93452772|gb|EAT03310.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93455050|gb|EAT05277.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
Length = 200
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 108/184 (58%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V +V+A++++L+ DP I YINS G G
Sbjct: 19 DIYSRLLKERIIFLGTGVNDEVANVVIAQMLFLEADDPDKDITFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC++ T+ +G A M +LLAAGTKGKR+ +P+A+I+I QP
Sbjct: 70 SVTAGLAIYDTMRYVKCDIATLCLGQAASMGAVLLAAGTKGKRYALPNARILIHQPMGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R L K+LA HTG + + R Y M S AK +G+ID
Sbjct: 130 QG--QASDIDIHAREILRMRQGLNKMLADHTGQKLKKIQTDTERDYFMSSEEAKTYGLID 187
Query: 292 KVLW 295
KVL
Sbjct: 188 KVLL 191
>gi|313894919|ref|ZP_07828479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|402301976|ref|ZP_10821097.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
gi|312976600|gb|EFR42055.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|400381261|gb|EJP34064.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
Length = 205
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V +VVA++++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL AG KGKR+ +PHA+IMI QP +
Sbjct: 71 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ ++LA+HTG + + R M + AK +G+ID
Sbjct: 131 QG--QSTDIQIQAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEEAKAYGLID 188
Query: 292 KVLWR 296
+V+ R
Sbjct: 189 EVVVR 193
>gi|373457870|ref|ZP_09549637.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
gi|371719534|gb|EHO41305.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
Length = 206
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 113/189 (59%), Gaps = 12/189 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V L++++L++L+ DP IYLYINS G G
Sbjct: 19 DIYSRLLKERIVFLGTPIDDNVASLIISQLLFLEAEDPTKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ +K +V T +G A M +LLAAG KGKR+ +PHA+IMI QP +
Sbjct: 70 IVSSGLAIYDTMRYIKPDVVTTCMGQAASMGAVLLAAGAKGKRYALPHARIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A E + + L ++LA TG E + + R + M + A E+G+ID
Sbjct: 130 EG--QASDIAIAANEILRIKKVLNQILADATGKPLEKIEQDTDRNFFMSAEEALEYGLID 187
Query: 292 KVL-WRGQE 299
KVL +R +E
Sbjct: 188 KVLSYRKEE 196
>gi|188996270|ref|YP_001930521.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931337|gb|ACD65967.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ + LVVA+L++L+ DP IY+YINS G G
Sbjct: 24 DIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LL+AG KGKR+ +P+A+IMI QP
Sbjct: 75 VVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARIMIHQPLGGF 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + + L + LAKHTG E + R Y M + AKE+G+ID
Sbjct: 135 QG--QATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKEYGLID 192
Query: 292 KVLWRGQE 299
KV+++ E
Sbjct: 193 KVIYKRGE 200
>gi|164687878|ref|ZP_02211906.1| hypothetical protein CLOBAR_01523 [Clostridium bartlettii DSM
16795]
gi|164603153|gb|EDQ96618.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium bartlettii DSM 16795]
Length = 217
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + A +V+A+L++L+ DP IYLYINS G G
Sbjct: 36 DIFSRLLCDRIIFLGEEVTDASASVVIAQLLFLEAEDPDKDIYLYINSPG---------G 86
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +KC+V T+ +G A LLA G KGKRF +P+++IMI QP +
Sbjct: 87 SVTAGFAIYDTMQHVKCDVSTICIGLAASFGSFLLAGGAKGKRFALPNSQIMIHQPLIGG 146
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+G+ A+D+ I A+ + ++ L ++LA++TG S E + + R M ++ A ++G+I
Sbjct: 147 NGIQGQATDIKIVAENLLKTKERLNRILAENTGKSIEEIYRDTDRDNFMSAQEALDYGLI 206
Query: 291 DKVLWR 296
D ++ R
Sbjct: 207 DSIITR 212
>gi|452943368|ref|YP_007499533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
gi|452881786|gb|AGG14490.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
Length = 205
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G P+ V L+VA+L++L+ DP+ I +YINS G G
Sbjct: 30 DIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQMYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M +LLAAG KGKRF +P+A+IMI QP
Sbjct: 81 SVTAGLAIYDTMQYIKPDVTTICIGQAASMGAVLLAAGAKGKRFALPNARIMIHQPLGGV 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+LI A+E + L +LA TG S + K + R Y M + AK +G+ID
Sbjct: 141 QG--QATDILIHAEEIKRIKHILNTILANATGKSLRQIEKDVDRDYFMSAEEAKNYGLID 198
Query: 292 KVLWR 296
KV+ +
Sbjct: 199 KVITK 203
>gi|349699184|ref|ZP_08900813.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
europaeus LMG 18494]
Length = 211
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V+ LV A+L+YL+ ++P I YINS G G
Sbjct: 30 DIYSRLLQERIIFLTGPVYDQVSALVSAQLLYLESVNPSKEISFYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++C V TV +G A M LLLA G KG+RF +P++++M+ QP +
Sbjct: 81 VVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRVMVHQPSGGA 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R L ++ +HTG + E + + + R +M + A+ FG++D
Sbjct: 141 QG--QASDIEIQAQEILTIRKRLNEIYKEHTGRTLEEIEQKLERDSYMSAEEAQAFGIVD 198
Query: 292 KVLWR 296
+V+ R
Sbjct: 199 EVVRR 203
>gi|408792290|ref|ZP_11203900.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463700|gb|EKJ87425.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
Length = 200
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++ A+L++L+ +P IYLYINS G G
Sbjct: 20 DIFSRLLKDRIIFLGSAIDETYANVISAQLLFLEAENPDRDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K EV T+ +G A MA LLLA G KGKR +P+++IM+ QP +
Sbjct: 71 YVSSGLAIYDTMQLIKPEVRTLCIGQASSMAALLLAGGAKGKRSALPNSRIMLHQPYGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + +D L+ L +HTG S + V K R + M + AK++G+ID
Sbjct: 131 GG--QASDIEISAKEIIKIKDKLIDLYGRHTGKSSDQVRKDTERNFFMSAEEAKDYGIID 188
Query: 292 KVL 294
V+
Sbjct: 189 NVI 191
>gi|269837422|ref|YP_003319650.1| endopeptidase Clp [Sphaerobacter thermophilus DSM 20745]
gi|269786685|gb|ACZ38828.1| Endopeptidase Clp [Sphaerobacter thermophilus DSM 20745]
Length = 209
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ + ++A++++L++ +P+ I LYINS G G
Sbjct: 28 DIYSRLLRDRIIFLGTPVDDQIANAIIAQMIFLEYENPEQDIKLYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++C+V T +G MA +LLAAGTKGKRF +P+++I+I Q
Sbjct: 79 LVYAGLAIYDTMQMIRCDVATYCIGLGASMAAVLLAAGTKGKRFALPNSRILIHQGSSGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +P D+ I+A+E + + +++A HTG S E V + R Y M ++ AKE+G++D
Sbjct: 139 RGSVP--DIEIQARETINLTTKMTEIMAYHTGQSFERVKRDTERDYFMSAQEAKEYGIVD 196
Query: 292 KVL 294
VL
Sbjct: 197 HVL 199
>gi|299143348|ref|ZP_07036428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298517833|gb|EFI41572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 194
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + +LVVA+L++L+ D I +YINS G G
Sbjct: 19 DIYSRLLKERIIFLSGEINDVTADLVVAQLLFLEAEDQNKDIQIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC+V T+ +G A M LLAAGTKGKRF +P+A IMI QP +
Sbjct: 70 SVSAGFAIYDTIKYIKCDVSTMVIGLAASMGAFLLAAGTKGKRFALPNADIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A++ + R+ + K+L++ TG E V + R Y++ ++ A E+G+ID
Sbjct: 130 QG--QASDIKIHAEKILEIRERINKILSEETGQPLEKVERDTDRDYYLSAKEAVEYGLID 187
Query: 292 KVLWR 296
KV+ +
Sbjct: 188 KVIEK 192
>gi|383784111|ref|YP_005468680.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
gi|383083023|dbj|BAM06550.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
Length = 200
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V LV+A+L++L+ D I +YINS G G
Sbjct: 18 DIYSRLLKERIIFLGTPIDDNVANLVIAQLLFLESEDASKDINIYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GFAIYDT+ +K +V T+ VG A M LLAAG KGKRF +P+A++MI QP
Sbjct: 69 VVTAGFAIYDTMQYIKPDVSTICVGQAASMGAFLLAAGAKGKRFALPNARVMIHQPLGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + + L +LLA HTG + + + + R Y + + +K++G++D
Sbjct: 129 QG--QATDIAIHAKEILKMKSHLNELLAHHTGQALQRIEQDTERDYFLSADESKDYGLVD 186
Query: 292 KVL 294
KV+
Sbjct: 187 KVM 189
>gi|159477909|ref|XP_001697051.1| catalytic subunit of mitochondrial ClpXP protease [Chlamydomonas
reinhardtii]
gi|158274963|gb|EDP00743.1| catalytic subunit of mitochondrial ClpXP protease [Chlamydomonas
reinhardtii]
Length = 231
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I + + VVA+L++L+ P PI +YINS G G
Sbjct: 49 DIFSRLLKERIVVINGGIDDNTSNSVVAQLLFLESQAPDKPITMYINSPG---------G 99
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C + T+ VG A MA LLLAAG KG+R +P+++IM+ QP +
Sbjct: 100 VVTAGLAIYDTMQYIRCPISTLVVGQAASMASLLLAAGAKGQRRSLPNSRIMLHQPLGAA 159
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D++IRA+E M ++TL L KHTG + E KT+ R M ++ AK++G+ID
Sbjct: 160 EG--QATDIMIRAQEIMRMKETLTSLYIKHTGCTREMAEKTLDRDSFMSAQEAKDWGLID 217
Query: 292 KVL 294
++L
Sbjct: 218 EIL 220
>gi|348026429|ref|YP_004766234.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
gi|341822483|emb|CCC73407.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
Length = 201
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 23/211 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
P ++ AQ ERS D+ S LL RIV++G P+ AV ++A+L++L+
Sbjct: 7 PIVVEQTAQGERSY------------DIYSRLLKDRIVFLGGPIDDAVANSIIAQLLFLE 54
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
+P I+LYINS G G+ + G AIYDT+ +K +V T+ VG+A MA +L
Sbjct: 55 AENPDKDIHLYINSPG---------GVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVL 105
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L AG KGKRF +PH+++MI QP G A+++ I A+E + R L +L+KHTG
Sbjct: 106 LTAGAKGKRFALPHSQVMIHQPLGGVQG--QATEIEIHAREILRMRKELNGILSKHTGQP 163
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
+ + K R M + AK +G+ID++L R
Sbjct: 164 IDVIQKDTERDNFMTAEEAKAYGLIDEILTR 194
>gi|434399879|ref|YP_007133883.1| ATP-dependent Clp protease proteolytic subunit ClpP [Stanieria
cyanosphaera PCC 7437]
gi|428270976|gb|AFZ36917.1| ATP-dependent Clp protease proteolytic subunit ClpP [Stanieria
cyanosphaera PCC 7437]
Length = 199
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 106 PDTPPPDLPSL---LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGT 162
P P D S+ L RI+++G + + ++A ++YL DP PIYLYINS G
Sbjct: 13 PGQPYSDWISIYDRLYRERIIFLGRGINDGIANQIIAIMLYLDSDDPGKPIYLYINSPG- 71
Query: 163 TRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKI 222
G + G AIYDT+ +K +V T+ VG A M LLA GTKGKR +PH++I
Sbjct: 72 --------GSVTAGLAIYDTMKHIKSDVVTICVGLAASMGAFLLAGGTKGKRLALPHSRI 123
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
MI QP G A+D+ I AKE + RD L +++A +TG + K R Y M +
Sbjct: 124 MIHQPLGGIQGRRQATDIEIEAKEILRIRDQLNQMMADNTGQPLAKIEKDTDRDYFMSAE 183
Query: 283 RAKEFGVIDKVL 294
AKE+G+IDKV+
Sbjct: 184 EAKEYGIIDKVI 195
>gi|399108290|gb|AFP20574.1| Clp protease, proteolytic subunit ClpP [uncultured bacterium]
Length = 198
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL I+++G P+ V L++A+L++L DP+ I LYINS G G
Sbjct: 19 DIYSRLLRDNIIFLGTPIDDNVANLIIAQLLFLSGEDPEKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A M LL AG KGKRF +P+A+I+I QP +
Sbjct: 70 SVSAGLAIYDTMQYIKNDVQTLCIGQAASMGAFLLMAGKKGKRFALPNARILIHQPLIMG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ A+++ I A+E + R+ + +++A+HTG + + + + R + M S +AKE+G+I
Sbjct: 130 GGIQGQATEIDIHAREILRLRERMNRIMAEHTGQTFDQIERDTDRDFSMGSEQAKEYGLI 189
Query: 291 DKVLWR 296
D ++ R
Sbjct: 190 DDIITR 195
>gi|428778679|ref|YP_007170465.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
gi|428692958|gb|AFZ49108.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
Length = 200
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 109/192 (56%), Gaps = 12/192 (6%)
Query: 106 PDTPPPDLPSL---LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGT 162
P P D ++ L RI+++G + + ++A ++YL DP PIYLYINS G
Sbjct: 13 PGQPYSDWVNIYDRLYRERIIFLGRGINDGLANQIIAVMLYLDSEDPSKPIYLYINSPG- 71
Query: 163 TRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKI 222
G S G AIYDT+ +K EV T+ VG A M LL AGT+GKR +PH++I
Sbjct: 72 --------GSVSAGMAIYDTMQHIKSEVVTICVGIAASMGAFLLTAGTQGKRIALPHSRI 123
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
MI QP + G A+D+ I A+E + R L +++AK+TG + E + K R + M +
Sbjct: 124 MIHQPLGGTQGRRQATDIEIEAREILRIRQQLDEIMAKNTGQTVEKIKKDTDRDFFMSAE 183
Query: 283 RAKEFGVIDKVL 294
AK +G+ID+V+
Sbjct: 184 EAKNYGIIDRVI 195
>gi|289577854|ref|YP_003476481.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|297544142|ref|YP_003676444.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|289527567|gb|ADD01919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|296841917|gb|ADH60433.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 195
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 112/187 (59%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + LV+A+L++L+ DP I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ VG A MA LLAAG KGKRF +P+++IMI QP
Sbjct: 70 SITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGM 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + RD L ++LA++TG E + R + MD+ AK +G+ID
Sbjct: 130 HG--QATDIKIHAERILKLRDKLDRILAENTGQPIEKIKADTERDFFMDAEDAKAYGIID 187
Query: 292 KVLWRGQ 298
+VL R +
Sbjct: 188 EVLIRNK 194
>gi|376295039|ref|YP_005166269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
gi|323457600|gb|EGB13465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
Length = 202
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V L+ A+L++L+ DP+ IY+YINS G G
Sbjct: 19 DIYSRLLKDRIILLGTAIDDHVASLICAQLLFLESEDPEKEIYMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ + V T+ +G A MA LLL AG KG R+ +PH++I+I QP +
Sbjct: 70 VVTSGMAIYDTMQYISAPVATLCMGQAASMASLLLCAGEKGMRYSLPHSRILIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + +D L ++A+HTG S E +T R Y M S A E+G+ID
Sbjct: 130 QG--QASDISIHAKEILRMKDELNGIMARHTGQSIEKITADTDRDYFMSSEEALEYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVM 190
>gi|261366992|ref|ZP_05979875.1| Clp protease [Subdoligranulum variabile DSM 15176]
gi|282571110|gb|EFB76645.1| endopeptidase Clp [Subdoligranulum variabile DSM 15176]
Length = 196
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 115/186 (61%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+ + + +VVA+L+YL+ DP+ IY YINS G G
Sbjct: 19 DIFSRLLNDRIIVLSEDVNSTSASVVVAQLLYLEGQDPEKDIYFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S+G AI+DT+ +KC+V T+ +G A M LLA+GTKGKRF +P+++I+I QP +
Sbjct: 70 SISDGMAIHDTMNYIKCDVSTICIGMAASMGSFLLASGTKGKRFALPNSEILIHQPLISG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ A+D+ I A + R+ + +L +++TG + E + + R +M +++AKE+G+I
Sbjct: 130 GGISGQATDIQIHANHIIHIRERMNQLYSQYTGQALETIQRDTERDNYMTAQQAKEYGLI 189
Query: 291 DKVLWR 296
D +L++
Sbjct: 190 DDILYK 195
>gi|414153433|ref|ZP_11409759.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455112|emb|CCO07662.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 195
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V +LV+A+ ++L+ DP+ I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVADLVIAQFLFLEAEDPEKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LLAAGTKGKR+ +P A+IMI QP
Sbjct: 71 VVTAGLAIYDTMQYIKPPVSTICLGQASSMGSFLLAAGTKGKRYALPMARIMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + +D L + LA HTG E V + R + M + AK++G+ID
Sbjct: 131 QG--QATDIDIHAKEILRMKDLLNEKLAYHTGQPLEKVARDTERDFFMSAEEAKQYGIID 188
Query: 292 KVL 294
+V+
Sbjct: 189 EVM 191
>gi|427724371|ref|YP_007071648.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356091|gb|AFY38814.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 200
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++G + A+ ++A ++YL DP PIYLYINS G G + G
Sbjct: 27 LYRERIIFLGRGVNDALANQIIAIMLYLDSEDPSKPIYLYINSPG---------GSVTAG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K EV T+ VG A M LL+AGTKGKR +PHA+IMI QP + G
Sbjct: 78 LAIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPHARIMIHQPLGGTQGRRQ 137
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I AKE + + L +L+A H+G + E + K R M ++ A E+G+IDKV+
Sbjct: 138 ATDIEIEAKEILRIKQQLNELMADHSGQTVEQIEKDTDRDNFMSAQEALEYGLIDKVI 195
>gi|406992634|gb|EKE11960.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 201
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A+L++L+ +PK I +YINS G G
Sbjct: 26 DIYSRLLKDRIIFLGTGIDDGVANAIIAQLLFLEQQNPKEDIKIYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S AIYDT+ ++C+V T+ +G A LLL AGTKGKR+++P+A++MI Q +
Sbjct: 77 SVSSALAIYDTMQYIRCDVQTICIGIAASAGALLLGAGTKGKRYILPNAEVMIHQVMGGA 136
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+ + +D L K+LAKHTG V R Y M S A ++G++D
Sbjct: 137 QG--QASDINIQAQHILKTKDVLNKILAKHTGQKIAKVETDTDRDYFMSSSEAVKYGIVD 194
Query: 292 KVL 294
K++
Sbjct: 195 KII 197
>gi|349685703|ref|ZP_08896845.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 211
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V+ LV A+L+YL+ ++P I YINS G G
Sbjct: 30 DIYSRLLQERIIFLTGPVYDQVSALVSAQLLYLESVNPTKEISFYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++C V TV +G A M LLLA G KG+RF +P++++M+ QP +
Sbjct: 81 VVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRVMVHQPSGGA 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R L ++ +HTG + E + + + R +M + A+ FG++D
Sbjct: 141 QG--QASDIEIQAQEILTIRKRLNEIYKEHTGRTLEEIEQKLERDSYMSAEEAQAFGIVD 198
Query: 292 KVLWR 296
+V+ R
Sbjct: 199 EVVRR 203
>gi|320450477|ref|YP_004202573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
scotoductus SA-01]
gi|320150646|gb|ADW22024.1| ATP-dependent Clp protease, proteolytic, subunit ClpP [Thermus
scotoductus SA-01]
Length = 212
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V ++VA+L++L +P I LYINS G D
Sbjct: 36 DIYSRLLKDRIIFLGTPIDSQVANIIVAQLLFLDAQNPNQEIRLYINSPGGEVD------ 89
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ ++ V T+ +G A MA ++LAAG KG+R+ +PH+K+MI QP
Sbjct: 90 ---AGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGV 146
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L ++LAKHTG E V K R Y++ ++ A E+G+ID
Sbjct: 147 RG--TASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLID 204
Query: 292 KVLWR 296
+V+ R
Sbjct: 205 QVVTR 209
>gi|347530949|ref|YP_004837712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
hominis A2-183]
gi|345501097|gb|AEN95780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
hominis A2-183]
Length = 201
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
M + G AIYDT+ +KC+V T+ +G A M LLA GTKGKR+ +P+A++MI QP +
Sbjct: 70 MVTAGMAIYDTMQYIKCDVSTICIGLAASMGAFLLAGGTKGKRYALPNAEVMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + + L ++LA +TG + V R Y+M + AK +G+ID
Sbjct: 130 KG--QATEIQIAAENILKTKKKLNEILAANTGKPYDVVAADTERDYYMSAEEAKAYGLID 187
Query: 292 KVLWR 296
V+ R
Sbjct: 188 DVIIR 192
>gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
Length = 194
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ L++A+L++L+ DP+ I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIEDYTANLIIAQLLFLEAEDPEKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LLAAG GKRF +P+A+IMI QP
Sbjct: 71 VVTAGMAIYDTMQYIKPPVSTICLGQAASMGSFLLAAGAPGKRFALPYARIMIHQPSGGM 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + ++ L KLL+KHT + +T+ R + M + AKE+G+ID
Sbjct: 131 QG--QATDIGIHAKEILRMKEILNKLLSKHTKQPLDKITRDSERDFFMSAEDAKEYGIID 188
Query: 292 KVLWR 296
+++ R
Sbjct: 189 QIVTR 193
>gi|260887080|ref|ZP_05898343.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|330839143|ref|YP_004413723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402833991|ref|ZP_10882598.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
gi|260863142|gb|EEX77642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|329746907|gb|AEC00264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402279060|gb|EJU28103.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
Length = 206
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V +VVA+L++L+ DP I+LYINS G G
Sbjct: 24 DIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDPDKDIHLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ +V T+ +G A M LLL AG KGKR+ +P A+IMI QP +
Sbjct: 75 VVTAGLAIYDTMQYIRPDVSTICIGQAASMGSLLLTAGAKGKRYALPLARIMIHQPLGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ +LAKHTG E + R M + AKE+G+ID
Sbjct: 135 QG--QSTDIQIQAKEILRLREVGNDILAKHTGQPREKLIADTERDNFMTAEEAKEYGLID 192
Query: 292 KVLWR 296
+V+ R
Sbjct: 193 EVITR 197
>gi|237743260|ref|ZP_04573741.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260495117|ref|ZP_05815246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|422939797|ref|ZP_16967169.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|229433039|gb|EEO43251.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260197560|gb|EEW95078.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|339890648|gb|EGQ79742.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 193
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 23/213 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V ++A+L+YL
Sbjct: 3 NPTVIDNNGKSERAY------------DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP+ I +YINS G G ++G AIYDT+ +K +V TV VG A M
Sbjct: 51 EAEDPEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAF 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LLAAG KGKRF + +++IMI QP L S GL A+D+ I A E + +D L +LLAK+TG
Sbjct: 102 LLAAGAKGKRFALENSRIMIHQP-LISGGLKGQATDISIHANELLKIKDKLAELLAKNTG 160
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++E + + R ++ S A +G+ID V R
Sbjct: 161 KTKEQILRDTERDNYLSSEEAVNYGLIDSVFRR 193
>gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122317850|sp|Q0AWF0.1|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 200
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LV+A+L++L+ DP I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDTL ++ +V T+ VG A M LLAAG KGKR+ +P+A+IMI QP +
Sbjct: 71 SITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGT 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ M +++L K+LA+ TG E + K R Y M ++ AKE+G+ID
Sbjct: 131 QG--QATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYGIID 188
Query: 292 KVL 294
+V+
Sbjct: 189 EVI 191
>gi|403381812|ref|ZP_10923869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JC66]
Length = 193
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 111/186 (59%), Gaps = 11/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + A+ +VA+L++LQ DP I++YINS G G
Sbjct: 19 DIYSRLLKDRIVFVGAAIDDALANSIVAQLLFLQAEDPDKDIHMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GF I+DT+ +K +V+T+ G A A LLL AG KGKRF +P+++IMI QP +
Sbjct: 70 STSAGFGIFDTMQYIKPQVNTICTGFAASFASLLLLAGAKGKRFALPNSEIMIHQPHGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+ + R+ +VK+ ++ TG E + K + R Y M + A E+G+ID
Sbjct: 130 QG--QASDIAISARRILQVREKIVKITSERTGQPIEKIEKDMDRDYFMSAEEALEYGIID 187
Query: 292 KVLWRG 297
K++ G
Sbjct: 188 KIITAG 193
>gi|434387492|ref|YP_007098103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
gi|428018482|gb|AFY94576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
Length = 203
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGGQVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V TV +G A M LL+AG KGKR +P ++IMI QP +
Sbjct: 68 SVSAGMGIFDTMNQIRPDVSTVCMGFAASMGAFLLSAGAKGKRTSLPSSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + TL LLAKHTG E + + R ++M + AK++G+ID
Sbjct: 128 QG--QATDIAIQAKEILYIKGTLNDLLAKHTGQPLEKIQEDTDRDFYMSAVEAKDYGLID 185
Query: 292 KVLWR 296
V+ R
Sbjct: 186 TVIDR 190
>gi|328950943|ref|YP_004368278.1| ATP-dependent Clp protease proteolytic subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328451267|gb|AEB12168.1| ATP-dependent Clp protease proteolytic subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 194
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 115/188 (61%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V VVA++++L+ +P I LYINS G D
Sbjct: 18 DIYSRLLKDRIIFLGTPIDTQVANTVVAQILFLEAQNPNQEIKLYINSPGGEVD------ 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ ++ V T+ VG A MA ++LAAG G+R+ +PH+++MI QP +
Sbjct: 72 ---AGLAIYDTMQYVRAPVSTICVGLAASMAAVILAAGEPGRRYALPHSRVMIHQPWGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A++ + R+ L K+L++HTG E VT+ R + MD++ AKE+G++D
Sbjct: 129 RG--QAADIAIEAEQILKMRENLNKILSQHTGQPLEKVTRDTDRNFWMDAQMAKEYGIVD 186
Query: 292 KVLWRGQE 299
+V+ R E
Sbjct: 187 QVVSREAE 194
>gi|410943166|ref|ZP_11374907.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
frateurii NBRC 101659]
Length = 214
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V L+ A+L+YL+ ++P I YINS G G
Sbjct: 32 DIFSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPTKEISFYINSPG---------G 82
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++C V TV +G A M LLLA G KG R+ +P+A++M+ QP +
Sbjct: 83 VVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHRYCLPNARVMVHQPSGGA 142
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E ++ R L ++ +HTG + E + + + R ++ + AKEFG+ID
Sbjct: 143 QG--QASDIEIQAREILLIRQRLNEIYREHTGQTLEEIERKLERDSYLSAEEAKEFGLID 200
Query: 292 KVLWR 296
V+ R
Sbjct: 201 AVVRR 205
>gi|452991802|emb|CCQ96761.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 194
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + +L+VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGGEVNDVTADLIVAQLLFLEAEDPDKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P++ IMI QP +
Sbjct: 70 AVSAGFAIYDTMQYIKPDVSTICIGRAASMGAFLLAAGAKGKRFSLPNSDIMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I A++ + R+ + K+L++ TG E +++ R + M ++ AKE+G+ID
Sbjct: 130 QG--QAEDIRIHAEKIIQTRELINKILSERTGQPLEKISRDTDRDFFMTAKEAKEYGIID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVI 190
>gi|414343400|ref|YP_006984921.1| protein ClpP [Gluconobacter oxydans H24]
gi|411028735|gb|AFW01990.1| ClpP [Gluconobacter oxydans H24]
gi|453331358|dbj|GAC86937.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
thailandicus NBRC 3255]
Length = 214
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V L+ A+L+YL+ ++P I YINS G G
Sbjct: 32 DIFSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPTKEISFYINSPG---------G 82
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++C V TV +G A M LLLA G KG R+ +P+A++M+ QP +
Sbjct: 83 VVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHRYCLPNARVMVHQPSGGA 142
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E ++ R L ++ +HTG + E + + + R ++ + AKEFG+ID
Sbjct: 143 QG--QASDIEIQAREILLIRQRLNEIYREHTGQTLEEIERKLERDSYLSAEEAKEFGLID 200
Query: 292 KVLWR 296
V+ R
Sbjct: 201 AVVRR 205
>gi|408417896|ref|YP_006759310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacula
toluolica Tol2]
gi|405105109|emb|CCK78606.1| ClpP: ATP-dependent Clp protease, proteolytic subunit
[Desulfobacula toluolica Tol2]
Length = 207
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG + + L+VA+ ++L+ DP+ I YINS G G
Sbjct: 19 DIYSRLLKDRIIFIGSAIDDEIANLIVAQFLFLESEDPEKDISFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V TV +G A M LLL AGTKGKRF +P+++IMI QP +
Sbjct: 70 VVTAGMAIYDTMQYIKPDVATVCIGQAASMGALLLTAGTKGKRFALPNSRIMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A E + +D L ++L+ HTG E V+ R + M + A ++G++D
Sbjct: 130 QG--QATDIKIQANEILRMKDILNEILSTHTGQDIEKVSADTERDFFMSATEAMKYGIVD 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVV 190
>gi|320530213|ref|ZP_08031283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
gi|320137646|gb|EFW29558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
Length = 199
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VVA++++L+ DP I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDNVANVVVAQMLFLESEDPDKDIHLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL AG KGKR+ +PHA+IMI QP +
Sbjct: 65 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ ++LA+HTG + + R M + AK +G+ID
Sbjct: 125 QG--QSTDIQIQAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEEAKAYGLID 182
Query: 292 KVLWR 296
+V+ R
Sbjct: 183 EVVVR 187
>gi|32490904|ref|NP_871158.1| hypothetical protein WGLp155 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340011|sp|Q8D346.1|CLPP_WIGBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25166110|dbj|BAC24301.1| clpP [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 194
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 120/209 (57%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ A+ ERS D+ S LL RI+++ + + L++A++++L+
Sbjct: 5 PTVVEKNARGERSY------------DIFSRLLKERIIFVTGKIEDYMANLIIAQMIFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP+ I+LYINS G G+ + G +IYDT+ +KCEV T+ +G + MA L+
Sbjct: 53 SEDPEKDIFLYINSPG---------GVVTSGMSIYDTMQFIKCEVSTLCIGQSSSMAALI 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA+G KGKRF +P+A+IMI QP S G A+D+ I E + + +++LL+KHTG S
Sbjct: 104 LASGEKGKRFSLPNARIMIHQPLGGSQG--QATDIAIHTTEILKIKKCMIELLSKHTGQS 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E ++K R A +G+IDKV+
Sbjct: 162 AEIISKDTERDRFFSGSEAVIYGLIDKVI 190
>gi|336420043|ref|ZP_08600289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
gi|336162184|gb|EGN65166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
Length = 193
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 23/213 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V ++A+L+YL
Sbjct: 3 NPTVIDNNGKSERAY------------DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP+ I +YINS G G ++G AIYDT+ +K +V TV VG A M
Sbjct: 51 EAEDPEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAF 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LLAAG KGKRF + +++IMI QP L S GL A+D+ I A E + +D L +LLAK+TG
Sbjct: 102 LLAAGAKGKRFALENSRIMIHQP-LISGGLKGQATDISIHANELLKIKDRLAELLAKNTG 160
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++E + + R ++ S A +G+ID V R
Sbjct: 161 KTKEEILRDTERDNYLSSEEAVNYGLIDSVFRR 193
>gi|150020876|ref|YP_001306230.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
melanesiensis BI429]
gi|149793397|gb|ABR30845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
melanesiensis BI429]
Length = 202
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 115/206 (55%), Gaps = 17/206 (8%)
Query: 92 PAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKA 151
P VE + Y D+ S LL RIV++G + V L+VA+L++L+ DP
Sbjct: 10 PMVVENTGRYER------AYDIYSRLLKDRIVFLGSAIDDHVANLIVAQLLFLEAEDPDK 63
Query: 152 PIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTK 211
I LYINS G G S G AIYDT+ +KC+V T+ +G A M +LLA GTK
Sbjct: 64 DIQLYINSPG---------GSVSAGLAIYDTMQYVKCDVTTICIGQAASMGAVLLAGGTK 114
Query: 212 GKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTK 271
GKRF +P+++IMI QP + G PA DV I KE + ++ + ++L+ HTG E + +
Sbjct: 115 GKRFSLPNSRIMIHQPLGGAEG--PAKDVEIMTKELLRIKNKINEILSLHTGQPIERIER 172
Query: 272 TIRRPYHMDSRRAKEFGVIDKVLWRG 297
R + M A E+G+IDKV+ G
Sbjct: 173 DTDRDFFMTPEDALEYGLIDKVIKPG 198
>gi|19705312|ref|NP_602807.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|237742958|ref|ZP_04573439.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|254302272|ref|ZP_04969630.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|289766533|ref|ZP_06525911.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296328560|ref|ZP_06871079.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|423137615|ref|ZP_17125258.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
gi|22653693|sp|Q8RHJ8.1|CLPP_FUSNN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|19713281|gb|AAL94106.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|148322464|gb|EDK87714.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|229430606|gb|EEO40818.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|289718088|gb|EFD82100.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296154369|gb|EFG95168.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|371959667|gb|EHO77345.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 193
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 23/213 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V ++A+L+YL
Sbjct: 3 NPTVIDNNGKSERAY------------DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP+ I +YINS G G ++G AIYDT+ +K +V TV VG A M
Sbjct: 51 EAEDPEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAF 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LLAAG KGKRF + +++IMI QP L S GL A+D+ I A E + +D L +LLAK+TG
Sbjct: 102 LLAAGAKGKRFALENSRIMIHQP-LISGGLKGQATDISIHANELLKIKDRLAELLAKNTG 160
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++E + + R ++ S A +G+ID V R
Sbjct: 161 KTKEQILRDTERDNYLSSEEAVNYGLIDSVFRR 193
>gi|427405940|ref|ZP_18896145.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
gi|425708781|gb|EKU71820.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
Length = 206
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +V+A++++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDNVANVVIAQMLFLESEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G A+YDT+ +K +V T+ +G A MA +LLAAG GKR+ +P A+IMI QP +
Sbjct: 71 VVTAGLAMYDTMQYIKPDVSTICIGQAASMASILLAAGAPGKRYALPQARIMIHQPSGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+T ++LAKHTG E + R M + AK +G+ID
Sbjct: 131 QG--QSTDIQIQAKEILRLRETANEILAKHTGQKPEAINVDTERDNFMSAEDAKAYGLID 188
Query: 292 KVLWR 296
+V+ R
Sbjct: 189 EVVVR 193
>gi|34762747|ref|ZP_00143736.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256846930|ref|ZP_05552384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294784271|ref|ZP_06749566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|421144657|ref|ZP_15604566.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|27887597|gb|EAA24677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256717728|gb|EEU31287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294488137|gb|EFG35488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|395488964|gb|EJG09810.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 193
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 23/213 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V ++A+L+YL
Sbjct: 3 NPTVIDNNGKSERAY------------DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP+ I +YINS G G ++G AIYDT+ +K +V TV VG A M
Sbjct: 51 EAEDPEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAF 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LLAAG KGKRF + +++IMI QP L S GL A+D+ I A E + +D L +LLAK+TG
Sbjct: 102 LLAAGAKGKRFALENSRIMIHQP-LISGGLKGQATDISIHANELLKIKDRLAELLAKNTG 160
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++E + + R ++ S A +G+ID V R
Sbjct: 161 KTKEQILRDTERDNYLSSEEAVNYGLIDSVFKR 193
>gi|429737530|ref|ZP_19271388.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
gi|429152336|gb|EKX95166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
Length = 197
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V +VVA+L++L+ DP I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL AG GKR+ +PHA+IMI QP +
Sbjct: 65 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ +LA+HTG E + R M + AK +G+ID
Sbjct: 125 QG--QSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKAYGLID 182
Query: 292 KVLWR 296
+V+ R
Sbjct: 183 EVVTR 187
>gi|171915864|ref|ZP_02931334.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Verrucomicrobium spinosum DSM 4136]
Length = 237
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 125/233 (53%), Gaps = 34/233 (14%)
Query: 68 VNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGM 127
+ RPSN Y PT++ + ++ER+ D+ S LL RI++IG
Sbjct: 11 IQRPSN---------YIIPTVIEAEGRMERAY------------DIYSRLLKDRIIFIGT 49
Query: 128 PLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMK 187
P+ V +V+A+L++LQ DPK I +YINS G G + G AIYDT+ +
Sbjct: 50 PIDDQVANIVIAQLLFLQMQDPKKDINIYINSPG---------GSVTAGLAIYDTMQFVT 100
Query: 188 CEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEA 247
C+V+T +G A M +LL AGTKGKR+ +P++ IMI Q + G ASDV R E
Sbjct: 101 CDVNTYCIGIAASMGAVLLTAGTKGKRYALPNSHIMIHQVSGGAQG--TASDVE-RTVEF 157
Query: 248 MVN-RDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
M + L K+++ HTG + E V + R Y+M A +G++DKVL +E
Sbjct: 158 MYRLKRRLNKIISHHTGKTVEAVERDADRDYYMSGEEAAAYGIVDKVLDNKKE 210
>gi|300869048|ref|ZP_07113650.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
gi|300332959|emb|CBN58844.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
Length = 197
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA L+YL D PI++YINS G G
Sbjct: 22 DIYTRLSQERIIFLGQEVTDGLANRIVAYLLYLDSDDSTKPIFIYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K EV T+ VG A M LLAAGTKGKR +PHA+IMI QP +
Sbjct: 73 SVTAGMAIFDTMQYIKSEVVTMCVGQAASMGAFLLAAGTKGKRLALPHARIMIHQPLGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + R L ++LAK TG + E + K R Y M + AKE+G+ID
Sbjct: 133 RG--QATDIQIEAKEILRVRQQLNEMLAKRTGQTLEKIQKDTDRDYFMSAAEAKEYGLID 190
Query: 292 KVL 294
+V+
Sbjct: 191 QVI 193
>gi|428217239|ref|YP_007101704.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427989021|gb|AFY69276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 232
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L++++L++L+ DP+ IYLYINS G G
Sbjct: 48 DIYSRLLRERIVFLGTQVDDNLASLIMSQLLFLEAEDPEKDIYLYINSPG---------G 98
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDTL ++ +V T+ +G A M LL+AG KGKR +P+A+IMI QP +
Sbjct: 99 SVTAGMAIYDTLQHVQPDVSTICMGLAASMGAFLLSAGAKGKRMALPNARIMIHQPLGGA 158
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + +++TL +LLA+HTG S + + R + M AKE+G+ID
Sbjct: 159 RG--QAVDIEIQAKEILYHKNTLNQLLAEHTGQSLDRIEADTERDFFMSPAEAKEYGLID 216
Query: 292 KVLWR 296
VL +
Sbjct: 217 TVLVK 221
>gi|149923964|ref|ZP_01912350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
gi|149815196|gb|EDM74745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
Length = 217
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V +++A+L++L+ DP I LYINS G G
Sbjct: 28 DIYSRLLKDRIVFLGDPINDRVASIIIAQLLFLESEDPDKDIRLYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G IYDT+ ++C+V T +G A M LLA G KGKRF +P+A+IMI QP +
Sbjct: 79 VVTAGLGIYDTMQYVRCDVATYCLGQAASMGAFLLAGGAKGKRFALPNARIMIHQPHGGA 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A+D+ I+A+E + + L +++A+H+G + + + R M + AK++G+ID
Sbjct: 139 SG--QATDIEIQAREILRLKAKLNEIMARHSGRTVDEILADTDRDNFMGADEAKKYGLID 196
Query: 292 KVLWRGQE 299
+VL R +E
Sbjct: 197 EVLRRSEE 204
>gi|16332037|ref|NP_442765.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|383323780|ref|YP_005384634.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326949|ref|YP_005387803.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492833|ref|YP_005410510.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438101|ref|YP_005652826.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|451816189|ref|YP_007452641.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|1705930|sp|P54416.1|CLPP1_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|1001349|dbj|BAA10836.1| ATP-dependent protease; ClpP [Synechocystis sp. PCC 6803]
gi|339275134|dbj|BAK51621.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|359273100|dbj|BAL30619.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276270|dbj|BAL33788.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279440|dbj|BAL36957.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960326|dbj|BAM53566.1| ATP-dependent protease ClpP [Bacillus subtilis BEST7613]
gi|451782158|gb|AGF53127.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
Length = 198
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + LVVA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AG KGKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L + LA HTG S E +T R + M + +KE+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVINR 190
>gi|401565794|ref|ZP_10806612.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
gi|400185000|gb|EJO19235.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
Length = 203
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V +VVA+L++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL AG GKR+ +PHA+IMI QP +
Sbjct: 71 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ +LA+HTG E + R M + AK +G+ID
Sbjct: 131 QG--QSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKAYGLID 188
Query: 292 KVLWR 296
+V+ R
Sbjct: 189 EVVTR 193
>gi|312880128|ref|ZP_07739928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
gi|310783419|gb|EFQ23817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
Length = 201
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + LVVA+L++L+ DP+ +YLYINS G G
Sbjct: 27 DIYSRLLKDRIVFLGEEIEEHMANLVVAQLLFLESEDPEKDVYLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +KC V T+ G A MA +LLA G KGKR +PHA+IMI QP +
Sbjct: 78 VVTAGMAIYDTMQYIKCPVSTICTGQAASMAAVLLAGGAKGKRIALPHARIMIHQPLGGA 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R+ L ++L HTG E + R + M + A +G++D
Sbjct: 138 QG--QATDIEIQAKEILRLREVLNQILVDHTGQPVERIKADTDRDFFMSAPEAVAYGLVD 195
Query: 292 KVL 294
KV+
Sbjct: 196 KVI 198
>gi|37523336|ref|NP_926713.1| ATP-dependent Clp protease-like protein [Gloeobacter violaceus PCC
7421]
gi|81708690|sp|Q7NEW1.1|CLPP2_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|35214340|dbj|BAC91708.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 218
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 110/174 (63%), Gaps = 9/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIVY+G P+ V EL++A+L+YL+ D PI +YINS G G E+ FA+Y
Sbjct: 37 RIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVA-------GFETSAFAVY 89
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ ++ + T+ +G A G + LL+AAGTKG+R +P+++I++ QP + G A+D+
Sbjct: 90 DTMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYGGARG--QATDI 147
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
IRA+E + + TL +LL+ HTG + E + K R ++M + A +G+IDKVL
Sbjct: 148 NIRAQELLTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQEAVSYGLIDKVL 201
>gi|357013904|ref|ZP_09078903.1| ClpP1 [Paenibacillus elgii B69]
Length = 193
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V ++A++++L DP I +YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSPINDVVANSIIAQMLFLAATDPDKDISVYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLAAG KGKRF +P++++MI QP +
Sbjct: 70 SITSGMAIYDTMQFIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ IRAK + RD L +LA+ TG S E + K R M + AK +G+ID
Sbjct: 130 EG--QASDIEIRAKRILKMRDKLNTILAERTGQSFERIEKDTDRDNFMSAEDAKNYGLID 187
Query: 292 KVLWR 296
KV+ R
Sbjct: 188 KVIER 192
>gi|16331162|ref|NP_441890.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|383322904|ref|YP_005383757.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326073|ref|YP_005386926.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383491957|ref|YP_005409633.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437225|ref|YP_005651949.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451815318|ref|YP_007451770.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|3023511|sp|P74467.1|CLPP3_SYNY3 RecName: Full=Probable ATP-dependent Clp protease proteolytic
subunit 3; AltName: Full=Endopeptidase Clp 3
gi|1653656|dbj|BAA18568.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339274257|dbj|BAK50744.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359272223|dbj|BAL29742.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275393|dbj|BAL32911.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278563|dbj|BAL36080.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961461|dbj|BAM54701.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7613]
gi|451781287|gb|AGF52256.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 202
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 108/183 (59%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + ++ +VA L+YL DP PIYLYINS G G
Sbjct: 22 DIYTRLSQERIIFLGQEVNDSIANRIVAFLLYLDSDDPSKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K EV T+ VG A M LLA+G GKR +PHA+IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKAEVITICVGLAASMGAFLLASGAPGKRLALPHARIMIHQP-MGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G A+D+ I A+E + R L +++A+ TG + E + K R Y + + AKE+G+ID
Sbjct: 132 TGRRQATDIDIEAREILRIRQQLNEIMAQRTGQTVEKIAKDTDRDYFLSAAEAKEYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|334139130|ref|ZP_08512526.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333603020|gb|EGL14444.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 200
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V ++A+L++L DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPVNDQVANAIIAQLLFLDAQDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLAAG KGKR+ +P++++MI QP +
Sbjct: 70 SITAGMAIYDTMQFIKSDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + R+ L K+LA+ TG E + K R Y M + A +G+ID
Sbjct: 130 EG--QATDIEIRARRILKMRENLNKILAERTGQPLERIDKDTDRDYFMSAAEASAYGLID 187
Query: 292 KVLWRGQE 299
KV+ + E
Sbjct: 188 KVIEKTTE 195
>gi|294054261|ref|YP_003547919.1| endopeptidase Clp [Coraliomargarita akajimensis DSM 45221]
gi|293613594|gb|ADE53749.1| Endopeptidase Clp [Coraliomargarita akajimensis DSM 45221]
Length = 197
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V V+A++++LQ DPK I LYINS G G
Sbjct: 21 DIYSRLLRDRIIFIGTPINDFVANAVIAQMLFLQMEDPKKDISLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
++G AIYDT+ ++C+V T VG A MA LLLAAGT GKR+ +P++++M+ QP +
Sbjct: 72 SVTDGMAIYDTMNFLQCDVVTYCVGQAASMATLLLAAGTPGKRYALPNSRVMMHQPTGGA 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G SD+ I AKE + R+ + L+A HT + E V R +++ ++ A ++G++D
Sbjct: 132 TG--QTSDISIAAKEILRWRERMNSLIASHTNKTAEEVAADSDRDFYLTAQDACDYGLVD 189
Query: 292 KVL 294
KV+
Sbjct: 190 KVI 192
>gi|403387723|ref|ZP_10929780.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
JC122]
Length = 194
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L+VA+L++L+ DP IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVNSTTASLIVAQLLFLESEDPDKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
++G AIYDT+ +K +V T+ G A M LL++G KGKRF +P+++IMI QP
Sbjct: 70 SITDGMAIYDTMNYIKPDVVTICTGLAASMGAFLLSSGAKGKRFALPNSEIMIHQPLGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AK + ++TL ++L+++TG S E + K + R Y M + AKE+G+ID
Sbjct: 130 KG--QATDIDIHAKRIIRIKETLNEILSENTGKSLEVIKKDVERDYFMSAEEAKEYGLID 187
Query: 292 KVLWR 296
+V+ +
Sbjct: 188 EVIIK 192
>gi|323140768|ref|ZP_08075687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414786|gb|EFY05586.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
Length = 197
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 117/187 (62%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ P+ + +V+A+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFVTGPIDDNMANVVIAQLLFLESEDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A MA +LLAAG GKRF +P++++MI QP +
Sbjct: 70 SVSAGMAIYDTMQYIKPDVSTICMGMAASMASVLLAAGAPGKRFALPYSRVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+E + R+ + ++LAKHTG + E + R +++ S+ AKE+G+ID
Sbjct: 130 QG--QATEIEIHAREILRIREEMNQVLAKHTGQTVEKIAADTERDHYLTSKEAKEYGLID 187
Query: 292 KVLWRGQ 298
+V+ R +
Sbjct: 188 EVVSRSK 194
>gi|334339586|ref|YP_004544566.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
gi|334090940|gb|AEG59280.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
Length = 195
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ + LV+A+ ++L+ DP+ I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIEDHIANLVIAQFLFLEAEDPEKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +KC V T+ +G A M LLAAGTKGKR+ +P+A+IMI Q
Sbjct: 71 VVTAGMAIYDTMQYIKCPVSTICLGQAASMGSFLLAAGTKGKRYSLPYARIMIHQVLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + ++ L + L+ HTG + + + R + M + AKE+G+ID
Sbjct: 131 QG--QATDIDIHAKEILRIKEVLNERLSHHTGQPLDKIARDTERDFFMSAEAAKEYGIID 188
Query: 292 KVL 294
+V+
Sbjct: 189 EVM 191
>gi|308069047|ref|YP_003870652.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305858326|gb|ADM70114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 194
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
P ++ AQ ERS D+ S LL RIV++G + + ++A+L++L
Sbjct: 6 PYVVEQTAQGERS------------YDIYSRLLKDRIVFVGAAIDDHLANSIIAQLLFLA 53
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP+ IY+YINS G G S GFAIYDT+ +K +VHT+ G A +L
Sbjct: 54 AEDPEKEIYMYINSPG---------GSTSAGFAIYDTMQYIKPDVHTICTGFAASFGAIL 104
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L AG KGKR +P+++IMI QP + G ASD+ I AK + R+ ++ A+ TG S
Sbjct: 105 LLAGAKGKRSALPNSEIMIHQPHGGAQG--QASDIAISAKRILWTREKATRITAERTGQS 162
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E V K + R ++M ++ A E+GVID+V+
Sbjct: 163 FEKVEKDMDRDFYMSAQEALEYGVIDQVI 191
>gi|212696598|ref|ZP_03304726.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325847156|ref|ZP_08169955.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676329|gb|EEB35936.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325480936|gb|EGC83982.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 195
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 114/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V+++++A+L++L+ DP I YINS G G
Sbjct: 23 DIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQDPNKDIQFYINSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL++G KGKRF +P++ I+I QP +
Sbjct: 74 VVTAGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLPNSNILIHQPSGGA 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A++ + + L K+L+ +TG + E + K R + MD+ AKE+G+ID
Sbjct: 134 QG--QASDIQIQAEQILKIKKRLNKILSDNTGQTIEKIQKDTDRDFSMDAYEAKEYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|422344962|ref|ZP_16425885.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
gi|355376104|gb|EHG23365.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
Length = 203
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V +VVA++++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL AG K KR+ +PHA+IMI QP +
Sbjct: 71 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKAKRYALPHARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ +LA+HTG E+ + R M + AK +G+ID
Sbjct: 131 QG--QSTDIQIQAKEILRLREVGNHILARHTGQDEKKINVDTERDNFMSAEEAKAYGLID 188
Query: 292 KVLWR 296
+V+ R
Sbjct: 189 EVVTR 193
>gi|225175200|ref|ZP_03729196.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
gi|225169376|gb|EEG78174.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
Length = 193
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V LV+A+L++L+ DP+ I +Y+NS G G
Sbjct: 19 DIYSRLLKDRIIFIGSPIDDNVANLVIAQLLFLESEDPEKDINIYVNSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ +K +V T+ VG A M +LLAAG GKRF +P+++IM+ QP +
Sbjct: 70 SVYAGLAIYDTMQYIKPDVSTICVGLAASMGAVLLAAGADGKRFSLPNSRIMVHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I AKE + R+ L ++L+ HTG E + + R Y M + +AKE+G+ID
Sbjct: 130 QG--QAVDIEIHAKEILRIRERLNEILSGHTGKPVEQIARDTDRDYFMSAEQAKEYGLID 187
Query: 292 KVLWR 296
VL +
Sbjct: 188 GVLEK 192
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 114/183 (62%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + ++ +++A+L++L+ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDPEKDIFLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ +V T+ VG A M +LLAAG KGKRF +PH++IMI QP +
Sbjct: 70 VVTAGMAIYDTMQYIRPKVSTICVGQAASMGAVLLAAGEKGKRFALPHSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L +L +HTG E + + R + M +A+ +G+ID
Sbjct: 130 QG--QATDIEIQAREILRIKEMLNDILVRHTGADLEKIQRDTDRDFFMTGEQARAYGIID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|168031792|ref|XP_001768404.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680329|gb|EDQ66766.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 201
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 116/193 (60%), Gaps = 11/193 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L+YL+ P PI+LYINS G G
Sbjct: 14 DIFSRLLKERIVCIHGPISDDTASLVVAQLLYLESEHPDKPIHLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ VG A M LLLAAG G+R +P+A++MI QP +
Sbjct: 65 VVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGQPGERRSLPNARVMIHQPSGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I+A+E + R L +L KHTG++ E + ++ R + M AK+FG++D
Sbjct: 125 SG--QASDIAIQAREILDMRARLSRLYVKHTGHTYEKIESSMERDHFMSPEEAKQFGLVD 182
Query: 292 KVLWRGQETIMAE 304
+V+ R E ++A+
Sbjct: 183 EVIERRPENLVAD 195
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447.1|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 111/182 (60%), Gaps = 11/182 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ L++A++++L+ DP+ I YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A MA LLLAAG KGKR+ +P+A+I+I QP
Sbjct: 70 VVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARILIHQPLGGV 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + R L ++L++HTG E + + R Y M ++ AKE+G+ID
Sbjct: 130 QG--QATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAKEYGIID 187
Query: 292 KV 293
+V
Sbjct: 188 EV 189
>gi|220928259|ref|YP_002505168.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
cellulolyticum H10]
gi|254763787|sp|B8I8F5.1|CLPP_CLOCE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219998587|gb|ACL75188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cellulolyticum H10]
Length = 194
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+ + + A L+VA+++YL+ DP I YINS G G
Sbjct: 19 DIFSRLLNDRIIVLSDEVNDATASLIVAQMLYLEAQDPDKDIQFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +KC+V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 SVASGFAIYDTMQYVKCDVSTICMGMAASMGAFLLAAGEKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + RD L K+L++ TG + + K R + M + AK +G+ID
Sbjct: 130 RG--QATDIKIHAENILRTRDKLNKILSERTGQPLDKIEKDTERDFFMSADEAKAYGIID 187
Query: 292 KVLWR 296
++ R
Sbjct: 188 DIMVR 192
>gi|428774097|ref|YP_007165885.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688376|gb|AFZ48236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 199
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 110/192 (57%), Gaps = 12/192 (6%)
Query: 106 PDTPPPDLPSL---LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGT 162
P P D ++ L RI+++G + ++ ++A ++YL D PIYLYINS G
Sbjct: 13 PGQPYSDWVNIYDRLYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNNKPIYLYINSPG- 71
Query: 163 TRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKI 222
G + G AIYDT+ +K EV T+ VG A M LLAAGTKGKR +PH++I
Sbjct: 72 --------GSVTAGMAIYDTMQHIKSEVVTICVGLAASMGAFLLAAGTKGKRLALPHSRI 123
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
MI QP G A+D+ I AKE + ++ L +++A HTG + E + K R Y M ++
Sbjct: 124 MIHQPLGGIQGRRQATDIEIEAKEILRIKNDLNRIMAFHTGQTIEKIEKDTDRDYFMSAQ 183
Query: 283 RAKEFGVIDKVL 294
A E+G+IDKV+
Sbjct: 184 EALEYGLIDKVI 195
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
Length = 199
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LV+A+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LL+ G KGKRF + +++IMI QP
Sbjct: 69 VVTAGMAIYDTMRYIKAPVSTICIGQAASMGAFLLSGGEKGKRFSLANSRIMIHQPLGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + +D L +LLA+HTG S E V R Y M AK +G+ID
Sbjct: 129 QG--QATDIHIHAKEILRMKDQLNELLAEHTGQSFEKVAADTERDYFMSGEEAKSYGIID 186
Query: 292 KVLWR 296
++ R
Sbjct: 187 AIVTR 191
>gi|452851006|ref|YP_007492690.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
gi|451894660|emb|CCH47539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
Length = 203
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V L+ A+L++L+ DP+ IY+YINS G G
Sbjct: 19 DIYSRLLKDRIILLGSAIDDHVASLICAQLLFLESEDPEKEIYMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ + V T+ +G A M LLL AG G R+ +PH++IMI QP +
Sbjct: 70 SVSSGMAIYDTMQYISAPVATLCLGQAASMGALLLGAGEAGMRYALPHSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + RD L +++A HTG E + + R Y M S+ A+E+G+ID
Sbjct: 130 QG--QASDIHIHAKEILRLRDELNEIMAGHTGQKLEKIREDTERDYFMSSKEAQEYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVM 190
>gi|442805909|ref|YP_007374058.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741759|gb|AGC69448.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 193
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + A L+VA++++L DP I YINS G G
Sbjct: 19 DIYSRLLEDRIIFLSDEVNDATASLIVAQMLFLDAKDPDKDIQFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLAAGTKGKRF +P++ IMI QP +
Sbjct: 70 SVTAGLAIYDTMQHVKADVSTICVGMAASMGAFLLAAGTKGKRFALPNSTIMIHQPAGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G PA+D+ I A+ + +D L ++LA+ TG E + + + R Y M + AKE+G++D
Sbjct: 130 KG--PATDIKIHAEWILKIKDNLNRILAEKTGQPLEKIQRDVERDYFMSAWEAKEYGIVD 187
Query: 292 KVLWR 296
+V+ R
Sbjct: 188 EVMVR 192
>gi|169831635|ref|YP_001717617.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169638479|gb|ACA59985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Desulforudis audaxviator MP104C]
Length = 198
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ V L++A+L++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKDRIVFIGGPIEDHVANLIIAQLLFLEAEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ +V T+ +G A LLAAGT GKRF +P+A+IM+ QP
Sbjct: 71 LVTSGMAIYDTMQYIRPDVSTICLGQAASFGAFLLAAGTPGKRFALPYARIMMHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+E + + L +LLAKHTG E + + R + M +A+E+G+ID
Sbjct: 131 QG--QATEIDIHAREILRTKRVLNELLAKHTGQPVEKIERDTERDFFMSPEQAREYGIID 188
Query: 292 KVL 294
+V+
Sbjct: 189 EVI 191
>gi|428306359|ref|YP_007143184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428247894|gb|AFZ13674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 202
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDADLANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ ++ T+ VG A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVSAGMGIFDTMNQIRPDISTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L + LA+HTG E + + R + M + +K +G+ID
Sbjct: 128 QG--QATDIEIQAKEILYHKRRLNEFLAQHTGQPLEKIEEDTERDFFMSAEESKNYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|433542295|ref|ZP_20498724.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|432186391|gb|ELK43863.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 198
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VVA+L++LQ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAGTKGKR+ +P++++MI QP +
Sbjct: 70 SITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + RD L +LA+ TG E + K R + ++ A E+G+ID
Sbjct: 130 QG--QASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAVEYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVI 190
>gi|113475006|ref|YP_721067.1| ATP-dependent Clp protease proteolytic subunit [Trichodesmium
erythraeum IMS101]
gi|110166054|gb|ABG50594.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 196
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA ++YL DP PIYLYINS G G
Sbjct: 22 DIYTRLGQERIIFLGQEVTDGLANRIVAYMLYLDSDDPNKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAGTKGKR +P+++IMI QP +
Sbjct: 73 SVTAGLAIYDTMQYIKADVITICLGLAASMGSFLLAAGTKGKRLALPNSRIMIHQPMGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A E + R L +LA+ TG S E + K R Y+M + AKE+G+ID
Sbjct: 133 RG--QATDIEIEANEILRVRSELNNMLAERTGQSLEKIEKDTDRDYYMSAEEAKEYGLID 190
Query: 292 KVL 294
+V+
Sbjct: 191 QVI 193
>gi|218295537|ref|ZP_03496350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
aquaticus Y51MC23]
gi|218244169|gb|EED10695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
aquaticus Y51MC23]
Length = 194
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VA+L++L +P I LYINS G D
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANTIVAQLLFLDAQNPNQEIRLYINSPGGEVD------ 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ ++ V T+ +G A MA ++LAAG KG+R+ +PH+K+MI QP +
Sbjct: 72 ---AGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L ++LAKHTG E V + R Y++ ++ A E+G+ID
Sbjct: 129 RG--TASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVERDTDRDYYLSAQEALEYGLID 186
Query: 292 KVLWR 296
+V+ R
Sbjct: 187 QVVTR 191
>gi|326519674|dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 256
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 134/243 (55%), Gaps = 25/243 (10%)
Query: 52 FLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPP 111
L +LA+AAA P AF + +G P + P ++ ++ ER+
Sbjct: 1 MLRRLASAAA--PRAFFSPSPAAGHAPRREYGLVPMVIEHTSRGERAY------------ 46
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P PI+LYINS G G
Sbjct: 47 DIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYINSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A M LLLAAG G+R +P+A++MI QP +
Sbjct: 98 VVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I+AKE + RD L K+ AKHTG + + + + + R MD A +G+ID
Sbjct: 158 SG--QASDIAIQAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPVEAHAWGLID 215
Query: 292 KVL 294
+V+
Sbjct: 216 EVI 218
>gi|226533042|ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194700894|gb|ACF84531.1| unknown [Zea mays]
gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea mays]
gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea mays]
Length = 260
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 53 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG---------G 103
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A MA LLLAAG G+R +P+A++MI QP +
Sbjct: 104 VVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNARVMIHQPSGGA 163
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I AKE + RD L K+ AKHTG + + + + + R MD A E+G+ID
Sbjct: 164 SG--QASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAHEWGLID 221
Query: 292 KVL 294
+V+
Sbjct: 222 EVI 224
>gi|428311957|ref|YP_007122934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428253569|gb|AFZ19528.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 202
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ + L+VA+L++L+ D + IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQPVDSDLANLIVAQLLFLEAEDAEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ Q++ +V T+ VG A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMNQVRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L + LA+HTG E + + R + M + AK++G+ID
Sbjct: 128 QG--QATDIEIQAREILYHKRRLNEFLAEHTGQPIERIEEDTERDFFMSAEEAKDYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|430751620|ref|YP_007214528.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430735585|gb|AGA59530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 195
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V V+A++++L DP+ I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDVVANSVIAQMLFLAADDPEKDIHLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLAAG GKR+ +P++++MI QP +
Sbjct: 72 SITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAPGKRYALPNSEVMIHQPLGGA 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ IRA+ + RD L K+L++ TG E + K R Y M + AK +G++D
Sbjct: 132 EG--QASDIEIRARRILKMRDKLNKILSERTGQPLERIEKDTDRDYFMSAEEAKNYGLVD 189
Query: 292 KVLWR 296
KV+ R
Sbjct: 190 KVIER 194
>gi|399050633|ref|ZP_10740728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|398051596|gb|EJL43914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
Length = 200
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VVA+L++LQ DP+ I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAGTKGKR+ +P++++MI QP +
Sbjct: 72 SITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGA 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + RD L +LA+ TG E + K R + ++ A E+G+ID
Sbjct: 132 QG--QASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAVEYGLID 189
Query: 292 KVL 294
KV+
Sbjct: 190 KVI 192
>gi|183220373|ref|YP_001838369.1| ATP-dependent Clp protease proteolytic subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910487|ref|YP_001962042.1| ATP-dependent Clp protease proteolytic subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775163|gb|ABZ93464.1| Protease subunit of endopeptidase Clp [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167778795|gb|ABZ97093.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 200
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 11/192 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V A+L++L+ +P IYLYINS G G
Sbjct: 20 DVYSRLLRDRIIFLGAGIDDTYANAVCAQLLFLEAENPDRDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K EV T+ +G A MA LLLA G KGKR +P+ +IM+ QP +
Sbjct: 71 YVSSGLAIYDTMQLIKPEVRTLCIGQASSMAALLLAGGAKGKRSALPNGRIMMHQPYGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + ++TL+ L KH G + K R + M + AKE+G+ID
Sbjct: 131 GG--QASDIEISAKEIIKTKNTLIDLYCKHIGKPAAQIQKDTERNFFMSAEEAKEYGIID 188
Query: 292 KVLWRGQETIMA 303
V+ ++ I A
Sbjct: 189 NVILERKQMIQA 200
>gi|167628597|ref|YP_001679096.1| ATP-dependent Clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
gi|167591337|gb|ABZ83085.1| ATP-dependent clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
Length = 199
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V L++A+L++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIILGSAIDDNVANLIIAQLLFLEAEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ ++C+V T+ VG A M LLAAG KGKR+ P+A+IMI QP
Sbjct: 71 AITSGFAIYDTMQLIRCDVSTICVGMAASMGAFLLAAGAKGKRYASPNAEIMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + RD L K+LA TG E + + R Y M + AK +G+ID
Sbjct: 131 KG--QATEIEIHARHILKTRDRLNKILADRTGQPLERIERDTDRDYFMSAEEAKAYGIID 188
Query: 292 KVL 294
V+
Sbjct: 189 GVM 191
>gi|326203841|ref|ZP_08193703.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
papyrosolvens DSM 2782]
gi|376259869|ref|YP_005146589.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. BNL1100]
gi|325985939|gb|EGD46773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
papyrosolvens DSM 2782]
gi|373943863|gb|AEY64784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. BNL1100]
Length = 194
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+ + + A LVVA+++YL+ DP I YINS G G
Sbjct: 19 DIFSRLLNDRIIVLSDEVNDATASLVVAQMLYLEAQDPDKDIQFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +KC+V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 SVASGFAIYDTMQYVKCDVSTICMGMAASMGAFLLAAGEKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + RD L K+L++ TG + + + R + M + AK +G+ID
Sbjct: 130 KG--QATDIKIHAENILRTRDKLNKILSERTGQPLDKIERDTERDFFMSADDAKAYGIID 187
Query: 292 KVLWR 296
++ R
Sbjct: 188 DIMVR 192
>gi|347753754|ref|YP_004861318.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum B]
gi|347586272|gb|AEP10802.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum B]
Length = 199
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL I++IG P+ V LVVA+L++L+ DP+ I +YINS G G
Sbjct: 24 DIYSRLLKDNIIFIGTPIDDTVASLVVAQLLFLESEDPERDISIYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K ++ T +G M LLLAAGTKGKR+ +PH++I+I QP +
Sbjct: 75 SVTAGMAIYDTMQFVKPDIVTFCIGQCASMGALLLAAGTKGKRYALPHSRILIHQPSGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+LI+A+E R+ +LAKHTG E + + R M + +A E+G++D
Sbjct: 135 QG--QATDILIQAEEIKRIRELTSNILAKHTGKPFEVIEADVERDRIMSATQAMEYGIVD 192
Query: 292 KVL 294
+VL
Sbjct: 193 QVL 195
>gi|402497009|ref|YP_006556269.1| protease subunit of ATP-dependent Clp protease [Wolbachia
endosymbiont of Onchocerca ochengi]
gi|398650282|emb|CCF78452.1| protease subunit of ATP-dependent Clp protease [Wolbachia
endosymbiont of Onchocerca ochengi]
Length = 199
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S L+ RI+++ P+ ++ ++VA+L++L+ +P IY+YINS G G
Sbjct: 19 DIYSRLVKERIIFVTGPIEDSMASVIVAQLLFLESENPDKDIYMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ +K +V T+ +G A M LLLAAGTKGKR+ +PH++IMI QP
Sbjct: 70 IVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRIMIHQPSGGY 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A E + + L ++ KHTGNS + + + + R MDS AK+ G++D
Sbjct: 130 QG--QATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEEMMERDKFMDSEEAKKIGLVD 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVM 190
>gi|313887837|ref|ZP_07821517.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846180|gb|EFR33561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 194
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + +L+VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLSGEVNDTMADLIVAQLLFLEAEDPNKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +K +V T+ +G A M LLA+G KGKRF +P++ IMI QP +
Sbjct: 70 SVSAGFAIYDTMNYIKPDVSTICIGMAASMGAFLLASGAKGKRFALPNSDIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A++ + R L ++LA+ TG E + K R Y ++S+ AK++G+ID
Sbjct: 130 QG--QASDIQINAEKILKIRHKLNEILAERTGQDLEKIEKDTDRDYWLNSQEAKDYGLID 187
Query: 292 KVLWR 296
KV+ +
Sbjct: 188 KVIEK 192
>gi|71066496|ref|YP_265223.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter
arcticus 273-4]
gi|110816464|sp|Q4FQB9.1|CLPP_PSYA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71039481|gb|AAZ19789.1| ATP-dependent Clp protease proteolytic subunit ClpP [Psychrobacter
arcticus 273-4]
Length = 225
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ + + L+VA+L++L+ +P I+LYINS G G
Sbjct: 47 DIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAENPDKDIHLYINSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ +K EV T+ +G A M LLAAG KGKR+ + +A++MI QP +
Sbjct: 98 SVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGQKGKRYALANARVMIHQPSGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L ++LA+ TG S E + K + R Y +D++ AKE+G+ID
Sbjct: 158 QG--QATDIEINAREILKTRARLNEILAERTGQSVEKIEKDVERDYWLDAKEAKEYGLID 215
Query: 292 KVLWR 296
+VL R
Sbjct: 216 EVLER 220
>gi|359689539|ref|ZP_09259540.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749517|ref|ZP_13305805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
gi|418759173|ref|ZP_13315353.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384113664|gb|EID99928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274402|gb|EJZ41720.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
Length = 197
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + +++A+L++L +P IYLY+NS G G
Sbjct: 19 DVFSRLLKDRIIFLGDAISDDYANVIIAQLLFLDAENPDRDIYLYLNSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A MA LLLA G KGKR +PH++IM+ QP +
Sbjct: 70 YVSSGLAIYDTMQYIKADVRTLCIGQASSMAALLLAGGAKGKRSALPHSRIMMHQPTGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G ASD+ I+AKE + + L L AKHTG S E V K R +M A+++G+ID
Sbjct: 130 TG--QASDIAIQAKEVLKLKQVLNGLYAKHTGKSVEEVQKDTERDLYMTPEEAQKYGIID 187
Query: 292 KVL 294
V+
Sbjct: 188 SVI 190
>gi|166031009|ref|ZP_02233838.1| hypothetical protein DORFOR_00690 [Dorea formicigenerans ATCC
27755]
gi|346308246|ref|ZP_08850367.1| ATP-dependent Clp protease proteolytic subunit [Dorea
formicigenerans 4_6_53AFAA]
gi|166029276|gb|EDR48033.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Dorea
formicigenerans ATCC 27755]
gi|345903543|gb|EGX73306.1| ATP-dependent Clp protease proteolytic subunit [Dorea
formicigenerans 4_6_53AFAA]
Length = 193
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++ G + A + +A+L++L+ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFFGEEVTDASASVAIAQLLFLEAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +KC++ T+ +G A M LLA GTKGKR +P+++IMI QP +
Sbjct: 70 SVSAGLAIYDTMQYIKCDIETICIGMAASMGSFLLAGGTKGKRLALPNSEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R+ L ++LA++TG E +++ R M + AK FG+ID
Sbjct: 130 QG--QATEIQIAAEHILKTRERLNRILAENTGQPLEVISRETDRDNFMSAEEAKAFGLID 187
Query: 292 KVLWR 296
+V+ R
Sbjct: 188 EVITR 192
>gi|115447465|ref|NP_001047512.1| Os02g0634500 [Oryza sativa Japonica Group]
gi|49388184|dbj|BAD25310.1| unknown protein [Oryza sativa Japonica Group]
gi|113537043|dbj|BAF09426.1| Os02g0634500 [Oryza sativa Japonica Group]
gi|215692767|dbj|BAG88235.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 298
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPG---------G 139
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ +G A M LLLAAG +G+R +P+A++MI QP +
Sbjct: 140 VVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVMIHQPSGGA 199
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ KHTG + + + + R MD A+++G+ID
Sbjct: 200 QG--QATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLID 257
Query: 292 KVL 294
+V+
Sbjct: 258 EVI 260
>gi|269798318|ref|YP_003312218.1| ATP-dependent Clp protease proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
gi|269094947|gb|ACZ24938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
Length = 197
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V V+A++++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG+A M +LL AGTKGKR+ +PHA+IMI QP
Sbjct: 69 VVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMIHQPLGGV 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G AS++ I A+E + R+ L +LA +G E V + R M ++ A E+G+ID
Sbjct: 129 QG--QASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLID 186
Query: 292 KVLWR 296
+VL R
Sbjct: 187 EVLTR 191
>gi|357168023|ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Brachypodium distachyon]
Length = 300
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P PI+LYINS G G
Sbjct: 93 DIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYINSPG---------G 143
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A M LLLAAG G+R +P+A++MI QP +
Sbjct: 144 VVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGA 203
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I AKE + RD L K+ AKHTG + E + K + R MD A +G+ID
Sbjct: 204 SGQ--ASDIAIHAKEILKVRDRLNKIYAKHTGQAIESIEKCMERDMFMDPVEAHSWGLID 261
Query: 292 KVL 294
+V+
Sbjct: 262 EVI 264
>gi|116785036|gb|ABK23566.1| unknown [Picea sitchensis]
Length = 243
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ I + +VVA+L++L+ +P PI LYINS G G
Sbjct: 49 DIFSRLLKERIICINGVIEDDTAAVVVAQLLFLESENPAKPINLYINSPG---------G 99
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T +G A M LLLAAG KG+R +P+A+IMI QP +
Sbjct: 100 VVTAGLAIYDTMQYIRSPVSTFCMGQAASMGSLLLAAGAKGERRSLPNARIMIHQPSGGA 159
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I+AKE ++ RD L L AKHTG S + + K + R M AKEFG++D
Sbjct: 160 SG--QASDIAIQAKEILLTRDRLNSLYAKHTGQSIDKIEKCMERDMFMSPEEAKEFGLVD 217
Query: 292 KVL 294
V+
Sbjct: 218 TVI 220
>gi|255658239|ref|ZP_05403648.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
gi|260849549|gb|EEX69556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
Length = 199
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ AV VVA+L++L+ DP I+LYINS G G
Sbjct: 14 DIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LLL AG KGKR+ +P+A+IMI QP +
Sbjct: 65 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGALLLTAGAKGKRYALPNARIMIHQPLGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+A+E R+ + +L + TG E V + R M + AK +G++D
Sbjct: 125 QG--QSTDIQIQAREIQRIREVINDILVESTGKDRETVVQDTERDNFMTAEEAKAYGLVD 182
Query: 292 KVLWR 296
+V+ R
Sbjct: 183 EVITR 187
>gi|224030041|gb|ACN34096.1| unknown [Zea mays]
gi|414586294|tpg|DAA36865.1| TPA: ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 259
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 52 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG---------G 102
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A MA LLLAAG G+R +P+A++MI QP +
Sbjct: 103 VVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNARVMIHQPSGGA 162
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I AKE + RD L K+ AKHTG + + + + + R MD A ++G+ID
Sbjct: 163 SG--QASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAHDWGLID 220
Query: 292 KVL 294
+V+
Sbjct: 221 EVI 223
>gi|282850557|ref|ZP_06259936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294792182|ref|ZP_06757330.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|294794047|ref|ZP_06759184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|417001079|ref|ZP_11940993.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
gi|282580050|gb|EFB85454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294455617|gb|EFG23989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|294457412|gb|EFG25774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|333975562|gb|EGL76441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
Length = 197
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V V+A++++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG+A M +LL AGTKGKR+ +PHA+IMI QP
Sbjct: 69 VVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMIHQPLGGV 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G AS++ I A+E + R+ L +LA +G E V + R M ++ A E+G+ID
Sbjct: 129 QG--QASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLID 186
Query: 292 KVLWR 296
+VL R
Sbjct: 187 EVLTR 191
>gi|158522703|ref|YP_001530573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
gi|259585950|sp|A8ZXB7.1|CLPP_DESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158511529|gb|ABW68496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
Length = 205
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG + L++A+L++L+ DP I YINS G G
Sbjct: 19 DIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K ++ TV +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 KVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + +D L ++LA HTG E + R + M AK +G++D
Sbjct: 130 QG--QASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAYGIVD 187
Query: 292 KVL 294
V+
Sbjct: 188 HVI 190
>gi|402814642|ref|ZP_10864236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
gi|402508489|gb|EJW19010.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
Length = 193
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A+L++L DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTEVNDLVANSIIAQLLFLAADDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ VG A M LL AG KGKRF +P+++IMI QP +
Sbjct: 70 SISAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L K+LA+ TG E V + R Y M ++ A ++G++D
Sbjct: 130 QG--QATDIEIRARRILKMRDNLNKILAERTGQPLERVERDTDRDYFMSAQEAFDYGLVD 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLGK 192
>gi|428216584|ref|YP_007101049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427988366|gb|AFY68621.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 197
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V+ L+VA++++L+ DP+ IYLY+NS G G
Sbjct: 17 DIFSRLLRERIVFLGQQVDDTVSNLIVAQMLFLEAEDPEKDIYLYVNSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ VG A M LLA G GKR +PH +IMI QP +
Sbjct: 68 SVTAGMAIYDTMQHIQPDVSTICVGLAASMGAFLLAGGAAGKRLSLPHTRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L +LLA HTG + + + R + M ++ AK++G++D
Sbjct: 128 QG--QAADIEIQAKEILYHKQRLNELLASHTGQPFDRIAEDTERDFFMSAQEAKDYGLLD 185
Query: 292 KVLWR 296
+V+ +
Sbjct: 186 EVVVK 190
>gi|91203769|emb|CAJ71422.1| strongly similar to ATP-dependent Clp protease proteolytic subunit
ClpP [Candidatus Kuenenia stuttgartiensis]
Length = 224
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 116/203 (57%), Gaps = 17/203 (8%)
Query: 92 PAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKA 151
P VE++ H D+ S LL RI++IG + +T LV+A++++LQ +
Sbjct: 29 PYVVEKTGHGERHY------DIFSRLLKDRIIFIGSAIEDTLTNLVIAQILFLQNENKNQ 82
Query: 152 PIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTK 211
I +YINS G G + G AIYDT+ ++C+V T +G A MA +LLA GTK
Sbjct: 83 DINIYINSPG---------GSITAGLAIYDTMQFVQCDVATFCIGQAYSMAAILLAGGTK 133
Query: 212 GKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTK 271
KRF +PH +IM+ QP G A+D+ I+A+E + + L ++L KHTG E +
Sbjct: 134 NKRFGLPHTRIMLHQPWGGMRG--TATDISIQAEEILKMKKCLNEILVKHTGQPLERIEA 191
Query: 272 TIRRPYHMDSRRAKEFGVIDKVL 294
+ R ++M S AKE+G+ID+V+
Sbjct: 192 DVDRDFYMSSHDAKEYGLIDEVI 214
>gi|434386912|ref|YP_007097523.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
gi|428017902|gb|AFY93996.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
Length = 214
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 113/184 (61%), Gaps = 7/184 (3%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTG---TTRDDGESVGMES--E 175
RI+++ P+ + +V+ L+YL+ +D PIYLYINS G G+ +GM S
Sbjct: 32 RIIFLNQPITDGLANSMVSSLLYLESVDNTKPIYLYINSLGDPVAAGMAGQEIGMMSVMA 91
Query: 176 GFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL 235
G AIYDT+ +K EV+T+ +G A+G+A LLL+AGT GKR +PHA I + R S G
Sbjct: 92 GLAIYDTIKHIKSEVYTICLGQAMGIATLLLSAGTPGKRASLPHASIGLMPARAGSRG-- 149
Query: 236 PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLW 295
ASD++I A E + + ++ +LA++TG S E + + R ++M + A+ +G+ID+VL
Sbjct: 150 QASDIVINAAEVLAKKTNIIDVLAQNTGQSPEKIERDSERMFYMTAHEAQAYGLIDRVLE 209
Query: 296 RGQE 299
+E
Sbjct: 210 SSKE 213
>gi|434399019|ref|YP_007133023.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270116|gb|AFZ36057.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 227
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 111/187 (59%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L+YL+ DP+ I LYINS G G
Sbjct: 41 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLEAEDPEKDIQLYINSPG---------G 91
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ ++ T+ G A M LL+ GTKGKR +P ++IMI QP +
Sbjct: 92 SVYSGMAIYDTMQQIQPDIVTICYGIAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGA 151
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + + L L+A+HTG E V R ++M ++ A+E+G+ID
Sbjct: 152 QG--QAVDIEIQAREILYIKKRLNDLIAEHTGQPFEKVAADTERDFYMSAQEAQEYGLID 209
Query: 292 KVLWRGQ 298
+V+ R Q
Sbjct: 210 QVIIRQQ 216
>gi|427412668|ref|ZP_18902860.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425716475|gb|EKU79459.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 197
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V LV+A+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIVFLGGPINDDVANLVIAQLLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG+A M +LL AG KGKR+ +PHA++MI QP
Sbjct: 69 VVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMIHQPLGGV 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G AS++ I A+E + R+ L LLA H+G + + + R M + A ++G+ID
Sbjct: 129 QG--QASEIEIHAREILRMREELNGLLASHSGQPIDVIARDTDRDNFMSAEDAVKYGLID 186
Query: 292 KVLWR 296
+VL R
Sbjct: 187 EVLTR 191
>gi|226501814|ref|NP_001150578.1| LOC100284211 [Zea mays]
gi|195640324|gb|ACG39630.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 260
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 53 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG---------G 103
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A MA LLLAAG G+R +P+A++MI QP +
Sbjct: 104 VVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGQRRALPNARVMIHQPSGGA 163
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I AKE + RD L K+ AKHTG + + + + + R MD A ++G+ID
Sbjct: 164 SG--QASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAHDWGLID 221
Query: 292 KVL 294
+V+
Sbjct: 222 EVI 224
>gi|125582984|gb|EAZ23915.1| hypothetical protein OsJ_07636 [Oryza sativa Japonica Group]
Length = 318
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPG---------G 139
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ +G A M LLLAAG +G+R +P+A++MI QP +
Sbjct: 140 VVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVMIHQPSGGA 199
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ KHTG + + + + R MD A+++G+ID
Sbjct: 200 QG--QATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLID 257
Query: 292 KVL 294
+V+
Sbjct: 258 EVI 260
>gi|116793577|gb|ABK26796.1| unknown [Picea sitchensis]
Length = 248
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ I P+ +VVA+L++L+ +P+ PI +YINS G G
Sbjct: 53 DIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQKPINMYINSPG---------G 103
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LLLAAG+ G+R +P+A++MI QP +
Sbjct: 104 VVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPNARVMIHQPSGGA 163
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I AKE + R+ L L AKHTG + E + + + R M AKEFG+ID
Sbjct: 164 SG--QASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMERDTFMSPDEAKEFGLID 221
Query: 292 KVL 294
+V+
Sbjct: 222 EVI 224
>gi|320164411|gb|EFW41310.1| ATP-dependent Clp protease proteolytic subunit [Capsaspora
owczarzaki ATCC 30864]
Length = 257
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 133/236 (56%), Gaps = 21/236 (8%)
Query: 68 VNRPSNSGTLPYLDIYDSPTLMAS--PAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYI 125
V + S++G+ P+ Y SPT+ A P VE + DL S LL RI+ +
Sbjct: 39 VAKSSSAGS-PFYS-YASPTVGAGVIPTVVENTGKSERWF------DLFSRLLRERIICL 90
Query: 126 GMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQ 185
P+ + ++V +L++L+ +P PI++YINS G G+ + G AIYDT+
Sbjct: 91 MGPIDDSTASVIVGQLLFLEGDNPLKPIHMYINSPG---------GVVTAGMAIYDTMQY 141
Query: 186 MKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAK 245
++ V T+ +G A M L+LAAG KG+RF++PHA++MI QP + G ASD+ I+A+
Sbjct: 142 VQSPVSTICMGQAASMGSLILAAGAKGQRFILPHARVMIHQPLGGAQG--QASDIAIQAR 199
Query: 246 EAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETI 301
E + R+ L ++ +HTG + + R Y M+ AKEFG+ID+V+ + T+
Sbjct: 200 EILKMREMLNRIYVEHTGQPLKRIEDATERDYFMNPEEAKEFGIIDQVIQKRDITV 255
>gi|125540417|gb|EAY86812.1| hypothetical protein OsI_08189 [Oryza sativa Indica Group]
Length = 318
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 89 DIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPG---------G 139
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ +G A M LLLAAG +G+R +P+A++MI QP +
Sbjct: 140 VVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVMIHQPSGGA 199
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ KHTG + + + + R MD A+++G+ID
Sbjct: 200 QG--QATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLID 257
Query: 292 KVL 294
+V+
Sbjct: 258 EVI 260
>gi|282856773|ref|ZP_06266034.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pyramidobacter piscolens W5455]
gi|282585396|gb|EFB90703.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pyramidobacter piscolens W5455]
Length = 192
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V VVA+L++L+ P+ I +YINS G G
Sbjct: 18 DIYSRLLKDRIVFLGDEINDDVANAVVAQLLFLESESPERDISIYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +KC+V T+ VG A MA +LL+AG+ GKR +P+++IMI QP +
Sbjct: 69 SVSAGLAIYDTMQFVKCDVSTIVVGMAASMAAVLLSAGSAGKRIALPNSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + ++TL +L KHTG S V R ++M ++ A +G++D
Sbjct: 129 QG--QASDIEIQAREIIKTKETLNNILVKHTGQSMRKVKGDTDRDFYMTAQEALAYGIVD 186
Query: 292 KVL 294
KV+
Sbjct: 187 KVI 189
>gi|313892932|ref|ZP_07826509.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442285|gb|EFR60700.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
Length = 197
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V V+A++++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG+A M +LL AGTKGKR+ +PHA++MI QP
Sbjct: 69 VVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARVMIHQPLGGV 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G AS++ I A+E + R+ L +LA +G E V + R M ++ A E+G+ID
Sbjct: 129 QG--QASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLID 186
Query: 292 KVLWR 296
+VL R
Sbjct: 187 EVLTR 191
>gi|403385525|ref|ZP_10927582.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC30]
Length = 201
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++L+ DP+ IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LL AG KGKRF +P+A+IMI QP +
Sbjct: 70 SVTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGKKGKRFALPNAEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + R+ L ++L++ TG E + K R +M + RA E+G+ID
Sbjct: 130 QG--QATEIEIAAKHILKTREKLNRILSERTGQPIEIIEKDTDRDNYMSAERALEYGIID 187
Query: 292 KVLWRGQET 300
K++ R + T
Sbjct: 188 KIMTRNETT 196
>gi|225423749|ref|XP_002277069.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Vitis vinifera]
Length = 241
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ +VVA+L++L+ +P PI++Y+NS G G
Sbjct: 46 DIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPG---------G 96
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ V+T+ +G A M LLLAAG KG+R +P+A IMI QP
Sbjct: 97 AVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNATIMIHQPSGGY 156
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A D+ I K+ + D+L L AKHTG S + + K + R Y M AKEFG+ID
Sbjct: 157 SG--QAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGIID 214
Query: 292 KVLWRGQETIMAEVAPPEEWDK 313
+V+ + ++ + E DK
Sbjct: 215 EVIDQRPMALVTDAVGNEGKDK 236
>gi|254410742|ref|ZP_05024520.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
gi|196182097|gb|EDX77083.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
Length = 202
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDSDLANLIVAQLLFLEADDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ Q++ +V T+ VG A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIYDTMNQIRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + ++ L +LLA+HT + + + R + M + AK++ +ID
Sbjct: 128 QG--QASDIEIQAKEILYHKQRLNQLLAEHTDQPLDRIAEDTERDFFMSAEEAKDYRLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVINR 190
>gi|421849601|ref|ZP_16282579.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus
NBRC 101655]
gi|421853139|ref|ZP_16285818.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371459662|dbj|GAB27782.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus
NBRC 101655]
gi|371478599|dbj|GAB31021.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 201
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V L+ A+L+YL+ ++P I YINS G G
Sbjct: 14 DIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPNKEISFYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ V TV +G A M LLLA G KG+RF +P+A++M+ QP +
Sbjct: 65 VVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNARVMVHQPSGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E ++ R L ++ +HTG + E + + + R +M ++ A+ FG++D
Sbjct: 125 QG--QASDIEIQAREILIIRQKLNEIYREHTGRTLEEIEQKLERDTYMSAQEAQSFGIVD 182
Query: 292 KVL 294
+V+
Sbjct: 183 EVI 185
>gi|258542726|ref|YP_003188159.1| ATP-dependent Clp protease proteolytic subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|384042647|ref|YP_005481391.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-12]
gi|384051164|ref|YP_005478227.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-03]
gi|384054272|ref|YP_005487366.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-07]
gi|384057506|ref|YP_005490173.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-22]
gi|384060147|ref|YP_005499275.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-26]
gi|384063439|ref|YP_005484081.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-32]
gi|384119449|ref|YP_005502073.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633804|dbj|BAH99779.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01]
gi|256636863|dbj|BAI02832.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-03]
gi|256639916|dbj|BAI05878.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-07]
gi|256642972|dbj|BAI08927.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-22]
gi|256646027|dbj|BAI11975.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-26]
gi|256649080|dbj|BAI15021.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-32]
gi|256652067|dbj|BAI18001.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655124|dbj|BAI21051.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-12]
Length = 220
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V L+ A+L+YL+ ++P I YINS G G
Sbjct: 33 DIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPNKEISFYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ V TV +G A M LLLA G KG+RF +P+A++M+ QP +
Sbjct: 84 VVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNARVMVHQPSGGA 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E ++ R L ++ +HTG + E + + + R +M ++ A+ FG++D
Sbjct: 144 QG--QASDIEIQAREILIIRQKLNEIYREHTGRTLEEIEQKLERDTYMSAQEAQSFGIVD 201
Query: 292 KVL 294
+V+
Sbjct: 202 EVI 204
>gi|422340211|ref|ZP_16421165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370151|gb|EHG17539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 193
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 23/213 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V ++A+L+YL
Sbjct: 3 NPTVIDNNGKSERA------------YDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ D + I +YINS G G ++G AIYDT+ +K +V TV VG A M
Sbjct: 51 EAEDSEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAF 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LLAAG KGKRF + +++IMI QP L S GL A+D+ I A E + +D L +LLAK+TG
Sbjct: 102 LLAAGAKGKRFALENSRIMIHQP-LISGGLKGQATDISIHANELLKIKDRLAELLAKNTG 160
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++E + + R ++ S A +G+ID V R
Sbjct: 161 KTKEQILRDTERDNYLSSEEAVNYGLIDSVFRR 193
>gi|254361750|ref|ZP_04977885.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452745422|ref|ZP_21945257.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
gi|153093285|gb|EDN74281.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452086571|gb|EME02959.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
Length = 197
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ G A M LL+AG KGKRF +PHA+IMI QP +
Sbjct: 70 VVTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + + TL + +A+H+G S E V R M + A E+G+ID
Sbjct: 130 RG--QATDIQIQAEEILRLKATLTRRMAEHSGQSYEKVLADTERDNFMSAEEAAEYGLID 187
Query: 292 KVL 294
KVL
Sbjct: 188 KVL 190
>gi|218245805|ref|YP_002371176.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
8801]
gi|34222618|sp|Q93AD7.1|CLPP_SYNP8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|16506757|gb|AAL23931.1|AF423175_1 putative ATP-dependent Clp proteinase [Cyanothece sp. PCC 8801]
gi|218166283|gb|ACK65020.1| Endopeptidase Clp [Cyanothece sp. PCC 8801]
Length = 199
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA L+YL DP PIYLYINS G G
Sbjct: 22 DIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPGKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLA+GT GKR +PHA+IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPHARIMIHQP-MGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G A+D+ I A E + R L ++LA TG + E + K R Y+M + A+ +G+ID
Sbjct: 132 TGRRQATDIQIEANEILRIRQQLNEILAHKTGQTIEKIQKDTDRDYYMSAEEAQAYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|335038541|ref|ZP_08531774.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334181561|gb|EGL84093.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V VVA+L++L DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDQVANAVVAQLLFLAAEDPEKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P++++MI QP +
Sbjct: 70 SITAGMAIYDTMQYIKPKVSTICIGLAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + RD L K+LA+ TG E + + R + M + AK +G+ID
Sbjct: 130 QG--QASDIEIHAKRILKMRDRLNKILAERTGQPLERIERDTDRDHFMSAEEAKAYGLID 187
Query: 292 KVLWR 296
+V+ R
Sbjct: 188 EVITR 192
>gi|302035647|ref|YP_003795969.1| ATP-dependent Clp protease proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
gi|300603711|emb|CBK40042.1| ATP-dependent Clp protease, proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
Length = 211
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ L++A+L++L+ DP+ I LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGAPIDDVFANLIIAQLLFLEAEDPEKDINLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ +K ++T+ +G A M LL AGTKGKR+ +P+A++MI QP
Sbjct: 69 SVTAGLGIYDTMQYVKPAINTICLGQAASMGAFLLTAGTKGKRYALPNARVMIHQPMGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+E + R+ L +++AKHTG + +++ R Y M S AK +G+ID
Sbjct: 129 QG--QATEIDIHAREILKIRERLNEIMAKHTGQPLDKISQDTERDYFMSSEEAKRYGLID 186
Query: 292 KVLWR 296
+V+ R
Sbjct: 187 EVITR 191
>gi|332707230|ref|ZP_08427283.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332353964|gb|EGJ33451.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 200
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + LVVA+L++L+ D + IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLEADDQEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ Q+ +V T+ VG A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMNQVAPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + ++ L LA+HTG E + + R + M + AK++G+ID
Sbjct: 128 QG--QASDIEIQAKEILYHKQQLNNYLAEHTGQPLEKIQEDTERDFFMSATEAKDYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIER 190
>gi|357059570|ref|ZP_09120412.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
gi|355371647|gb|EHG18991.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
Length = 203
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ +V +VVA+L++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL AG GKR+ +PHA+IMI QP +
Sbjct: 71 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+AKE + R+ +LA HTG E + R M + A+ +G+ID
Sbjct: 131 QG--QSTDIQIQAKEILRLREVGNNILAHHTGQDPEKINVDTERDNFMSAEEARAYGLID 188
Query: 292 KVLWR 296
+V+ R
Sbjct: 189 EVVTR 193
>gi|116747551|ref|YP_844238.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
gi|166214718|sp|A0LEF1.1|CLPP_SYNFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116696615|gb|ABK15803.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
Length = 202
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V +++A+L++L+ DP I+ YINS G G
Sbjct: 19 DIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDIHFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A MA +LLAAG KGKR+ +PH +IM+ QP
Sbjct: 70 LVTAGLAIYDTMQFIKPNVSTLCMGQAASMAAILLAAGVKGKRYALPHVRIMLHQPMGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+DV I+AKE + R+ L +L +HTG E + + R ++M +A+E+G++D
Sbjct: 130 QG--QATDVEIQAKEILKLREELNDILVRHTGRPVEQIQRDTDRDFYMSGEQAREYGMVD 187
Query: 292 KVL 294
+
Sbjct: 188 HIF 190
>gi|284097335|ref|ZP_06385465.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
gi|283831154|gb|EFC35134.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
Length = 203
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 115/190 (60%), Gaps = 11/190 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ + L++A+L++L+ DP+ I LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGAPIDDIFSNLIIAQLLFLEAEDPEKDINLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ +K + T+ +G A M LLLAAGT+GKR +P+A++MI QP
Sbjct: 69 SVTAGMGIYDTMQYVKPPITTICLGQAASMGALLLAAGTQGKRHALPNARVMIHQPMGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+E + R+ L ++L++HTG + E +++ R Y M AK++G+ID
Sbjct: 129 QG--QATEIDIHAREILKIRERLNQILSEHTGQALEKISQDTERDYFMSGTEAKDYGLID 186
Query: 292 KVLWRGQETI 301
+V+ R E +
Sbjct: 187 EVIVRASEKV 196
>gi|339499730|ref|YP_004697765.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
caldaria DSM 7334]
gi|338834079|gb|AEJ19257.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
caldaria DSM 7334]
Length = 204
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + +LVVA++++L+ DP+ I LYINS G G
Sbjct: 24 DIYSRLLKDRIIFLDGEINDVTADLVVAQMLFLEGQDPEKDISLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ +G A MA L+LAAGT GKRF +P ++I+I QP +
Sbjct: 75 SVTAGLAIYDTMQYIKCAVQTICLGQAASMAALILAAGTAGKRFALPSSRILIHQPWGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ AKHTG +E + + + R + M ++ A +GV D
Sbjct: 135 QG--QAKDIGIQAKEIGRLKKLTIEYFAKHTGKTEAQIAQDMERDFFMSAQDAVAYGVAD 192
Query: 292 KVLWR 296
K+L R
Sbjct: 193 KILTR 197
>gi|282883083|ref|ZP_06291683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300813694|ref|ZP_07094016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
gi|281297060|gb|EFA89556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300512236|gb|EFK39414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
Length = 194
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++ + + +L+VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFASGEVNDTMADLIVAQLLFLESEDPNKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A M +LL++G KGKRF +P++ IMI QP +
Sbjct: 70 SVSAGLAIYDTMQYIKPDVSTICIGMAASMGAILLSSGAKGKRFALPNSDIMIHQPSGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G+ A+D+ I A++ + R +L ++LAK+TG E + + R + +D+ AKE+G+ID
Sbjct: 130 QGM--ATDIQITAEKILKTRKSLNQILAKNTGQKLEKIERDADRDFWLDANEAKEYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVI 190
>gi|226314841|ref|YP_002774737.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226097791|dbj|BAH46233.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 198
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VVA+L++LQ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P++++MI QP +
Sbjct: 70 SITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + RD L +LA+ TG E + K R + + A E+G+ID
Sbjct: 130 QG--QASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAVEYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVI 190
>gi|223938520|ref|ZP_03630412.1| Endopeptidase Clp [bacterium Ellin514]
gi|223892782|gb|EEF59251.1| Endopeptidase Clp [bacterium Ellin514]
Length = 215
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V L++A+L++LQ DPK I+LYINS G G
Sbjct: 26 DIYSRLLVDRIVFLGTPVDDMVANLIIAQLLFLQMSDPKKDIHLYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V+T +G A M +LL GTKGKR+ +P+A IMI Q +
Sbjct: 77 SVTAGLAIYDTMQFLTCDVNTYCIGQAASMGAVLLCGGTKGKRYALPNANIMIHQVLGGA 136
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASDV IR K + + L +++KHTG E V K R M S AK +G++D
Sbjct: 137 EG--QASDVEIRVKYMLRLKQRLNGIISKHTGKPIEQVEKDCDRDNFMTSDEAKAYGLVD 194
Query: 292 KVLWRGQE 299
+V+ +E
Sbjct: 195 EVVQSRKE 202
>gi|89896100|ref|YP_519587.1| hypothetical protein DSY3354 [Desulfitobacterium hafniense Y51]
gi|219670517|ref|YP_002460952.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
hafniense DCB-2]
gi|116243113|sp|Q24S49.1|CLPP2_DESHY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|89335548|dbj|BAE85143.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540777|gb|ACL22516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfitobacterium hafniense DCB-2]
Length = 202
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V LVVA++++L+ DP+ I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ +VHT+ VG A M LL AG KGKR +P+A+I+I QP +
Sbjct: 71 SISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQPLIGG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ A+++ I AK + ++ + ++LA+ TG + E + R +M + AKE+G+I
Sbjct: 131 GGISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEEAKEYGLI 190
Query: 291 DKVLWR 296
D+VL +
Sbjct: 191 DEVLEK 196
>gi|239618479|ref|YP_002941801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
gi|239507310|gb|ACR80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
Length = 206
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + LL RI+++G PL ++ +VVA+L++L+ DP I +YINS G G
Sbjct: 24 DIFTKLLSERIIFLGWPLDDEISNIVVAQLLFLESQDPDKDISIYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A MA ++LA G+KGKRF +PH++IMI QP +
Sbjct: 75 SVTSGLAIYDTMQYIKPDVSTICIGMAASMAAVILAGGSKGKRFALPHSRIMIHQPWGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ IR +E + RD + ++L+ HT +E + + R ++M A ++G++D
Sbjct: 135 EG--TAKDIEIRTRELLFIRDQINEILSHHTNQPKEKIEEDTDRDFYMSPAEAVKYGLVD 192
Query: 292 KVL 294
KV+
Sbjct: 193 KVI 195
>gi|257058851|ref|YP_003136739.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
8802]
gi|256589017|gb|ACU99903.1| Endopeptidase Clp [Cyanothece sp. PCC 8802]
Length = 199
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA L+YL DP PIYLYINS G G
Sbjct: 22 DIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPGKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLA+GT GKR +PHA+IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPHARIMIHQP-MGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G A+D+ I A E + R L ++LA TG + E + K R Y+M + A+ +G+ID
Sbjct: 132 TGRRQATDIQIEANEILRIRQQLNEILAYKTGQTIEKIQKDTDRDYYMSAEEAQAYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|428202895|ref|YP_007081484.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
gi|427980327|gb|AFY77927.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
Length = 199
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA L+YL D PIY+YINS G G
Sbjct: 22 DIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSDDSSKPIYMYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLAAGT GKR +PH++IMI QP L
Sbjct: 73 SVTAGMAIYDTMQYIKADVITICVGLAASMGAFLLAAGTPGKRLALPHSRIMIHQP-LGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G A+D+ I AKE + R L ++LA+ TG E + K R Y M + AKE+G+ID
Sbjct: 132 TGRRQATDIEIEAKEIIRIRRQLNEILAQRTGQPIERIEKDTDRDYFMSAEEAKEYGLID 191
Query: 292 KVL 294
+V+
Sbjct: 192 RVI 194
>gi|428775586|ref|YP_007167373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428689865|gb|AFZ43159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 199
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+++YL+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDDEIANLIVAQMLYLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVSTICLGLAASMGAFLLSAGEKGKRLSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L LA+HTG + + + R + M + + E+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKQQLNHYLAEHTGQPLDRIAEDTERDFFMSPQESMEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 RVIER 190
>gi|154497945|ref|ZP_02036323.1| hypothetical protein BACCAP_01925 [Bacteroides capillosus ATCC
29799]
gi|150272935|gb|EDN00092.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Pseudoflavonifractor capillosus ATCC 29799]
Length = 193
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+++G + LVVA+++YL+ DP I YINS G G
Sbjct: 19 DIFSRLLNDRIIFLGEEVNATTASLVVAQMLYLEAQDPDKDIQFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
++G AIYDT+ +KC+V T+ +G A M LL++GTKGKR +P+A+IMI QP +
Sbjct: 70 SVTDGMAIYDTMQYIKCDVSTICIGMAASMGAFLLSSGTKGKRLALPNAEIMIHQPSAGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G + +D+ I K V + + K+LA +TG E VT R M + A E+G+ID
Sbjct: 130 QGQI--TDMAIHLKRLEVIKKRMNKILADNTGKPVEVVTADCERDNFMSAEEACEYGLID 187
Query: 292 KVLWR 296
KV+++
Sbjct: 188 KVIYQ 192
>gi|411118195|ref|ZP_11390576.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711919|gb|EKQ69425.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 207
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + LVVA+L++L DP+ IYLYINS G G
Sbjct: 23 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLDAEDPEKDIYLYINSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ Q++ +V T+ +G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 74 SVTAGMGIFDTMKQIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L +LLA+HTG + + R + M + AK++G+ID
Sbjct: 134 QG--QATDIEIQAKEILYHKQRLNELLAEHTGQPFSRIQEDTERDFFMSAGEAKDYGLID 191
Query: 292 KVLWR 296
+V+ R
Sbjct: 192 QVIDR 196
>gi|384439472|ref|YP_005654196.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp.
CCB_US3_UF1]
gi|359290605|gb|AEV16122.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp.
CCB_US3_UF1]
Length = 198
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VA+L++L +P I LYINS G D
Sbjct: 22 DIYSRLLKDRIIFLGTPIDAQVANTIVAQLLFLDAQNPNQEIRLYINSPGGEVD------ 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ ++ V T+ +G A MA ++LAAG KG+R+ +PH+K+MI QP +
Sbjct: 76 ---AGLAIYDTMQFVRAPVSTIVIGLAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGA 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L ++LAKHTG E V K R Y++ ++ A +G+ID
Sbjct: 133 RG--TASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALAYGLID 190
Query: 292 KVLWR 296
+V+ R
Sbjct: 191 QVVTR 195
>gi|398345034|ref|ZP_10529737.1| ATP-dependent Clp protease proteolytic subunit [Leptospira inadai
serovar Lyme str. 10]
Length = 198
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + +V+A+L++L +P IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ VG A MA LLLA G KGKR +PH++IM+ QP +
Sbjct: 70 YVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRIMMHQPTGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G ASD+ I+AKE + ++ L L KHTG E + K R +M + A+ +G+ID
Sbjct: 130 TG--QASDIAIQAKEVLKLKEILNGLYTKHTGKPIEQIQKDTERDLYMTAEEAQIYGIID 187
Query: 292 KVL 294
V+
Sbjct: 188 SVI 190
>gi|398814906|ref|ZP_10573583.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398035724|gb|EJL28955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 200
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VVA+L++LQ DP+ I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P++++MI QP +
Sbjct: 72 SITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGA 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + RD L +LA+ TG E + K R + + A E+G+ID
Sbjct: 132 QG--QASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAVEYGLID 189
Query: 292 KVL 294
KV+
Sbjct: 190 KVI 192
>gi|86608098|ref|YP_476860.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556640|gb|ABD01597.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 211
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 13/191 (6%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----VTELVVAELMYLQWMDPKAPIYLYINSTGTT 163
TPPPDL SLLL RIVY+G+PL VT+L++ +L+YLQ+ D + PI +YINSTGT
Sbjct: 16 TPPPDLASLLLQERIVYLGLPLAEESNANVTKLIIEQLLYLQYEDREKPIKMYINSTGTY 75
Query: 164 RDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIM 223
D + FAI DT+ +K VHT+ +G AIGMA +LLAAG KG R +P+A I+
Sbjct: 76 NYD-------TAAFAILDTMNYIKPPVHTICIGNAIGMAAMLLAAGAKGFRASLPNATIV 128
Query: 224 IQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
+ QP + G ASD+ IR +E + R+ +++ L++ TG E + K R + M
Sbjct: 129 LHQPYGGTRG--QASDIEIRTREILTLRNMMLEQLSRSTGQPMERIKKDTERLFFMTPEE 186
Query: 284 AKEFGVIDKVL 294
AK +G+ID+VL
Sbjct: 187 AKAYGLIDQVL 197
>gi|147797194|emb|CAN64666.1| hypothetical protein VITISV_024612 [Vitis vinifera]
Length = 221
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ +VVA+L++L+ +P PI++Y+NS G G
Sbjct: 26 DIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ V+T+ +G A M LLLAAG KG+R +P+A IMI QP
Sbjct: 77 AVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNATIMIHQPSGGY 136
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A D+ I K+ + D+L L AKHTG S + + K + R Y M AKEFG+ID
Sbjct: 137 SG--QAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGIID 194
Query: 292 KVLWRGQETIMAEVAPPEEWDK 313
+V+ + ++ + E DK
Sbjct: 195 EVIDQRPMALVTDAVGNEGKDK 216
>gi|406906710|gb|EKD47785.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 206
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 115/211 (54%), Gaps = 23/211 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ AQ ERS D+ S LL RI+++G + V L++A+L++L
Sbjct: 18 PTVLEKTAQGERSY------------DIYSRLLKDRIIFLGTTIDGNVANLIIAQLLFLD 65
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
+PK I +YINS G G + G AIYDT+ +KC+V TV VG A M +L
Sbjct: 66 NENPKKDITMYINSPG---------GHVTAGLAIYDTMQHLKCDVSTVCVGMAASMGAVL 116
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L G KGKRF +P+A++MI QP G A+++ I AK + + L +L+AKHTG
Sbjct: 117 LCGGAKGKRFSLPNAEVMIHQPLGGVEG--QATEIEIHAKHILKTKTRLNELIAKHTGKK 174
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
V K R M + A ++G+IDK++ +
Sbjct: 175 VSEVEKDTDRDNFMSAEDALKYGLIDKIVRK 205
>gi|319955770|ref|YP_004167033.1| ATP-dependent clp protease proteolytic subunit clpp [Nitratifractor
salsuginis DSM 16511]
gi|319418174|gb|ADV45284.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitratifractor
salsuginis DSM 16511]
Length = 196
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + AV +VA+L++L+ DP IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDAVASSIVAQLLFLEAQDPDKDIYFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GF+IYDT+ +K +V T+ +G A M LLA G +GKR+ +P ++IMI QP +
Sbjct: 70 VITSGFSIYDTMNYIKPDVSTICIGQAASMGAFLLACGAEGKRYALPSSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L K+LA+ TG S + + K R Y M + A+E+G+ID
Sbjct: 130 QG--QATDIAIQAKEILRMKTYLNKILAEKTGKSVKKIEKDTERDYFMSAEEAQEYGLID 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLTK 192
>gi|297737943|emb|CBI27144.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ +VVA+L++L+ +P PI++Y+NS G G
Sbjct: 14 DIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ V+T+ +G A M LLLAAG KG+R +P+A IMI QP
Sbjct: 65 AVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNATIMIHQPSGGY 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A D+ I K+ + D+L L AKHTG S + + K + R Y M AKEFG+ID
Sbjct: 125 SG--QAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGIID 182
Query: 292 KVLWRGQETIMAEVAPPEEWDK 313
+V+ + ++ + E DK
Sbjct: 183 EVIDQRPMALVTDAVGNEGKDK 204
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27.1|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LV+A+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ VG A M LL+ G KGKR+ + +++IMI QP
Sbjct: 69 VVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + +D L LLA+HTG S E V R Y M AK +G+ID
Sbjct: 129 QG--QATDIHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIID 186
Query: 292 KVLWR 296
++ R
Sbjct: 187 AIVTR 191
>gi|423077037|ref|ZP_17065745.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
gi|361851989|gb|EHL04277.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
Length = 196
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V LVVA++++L+ DP+ I+LYINS G G
Sbjct: 14 DIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ +VHT+ VG A M LL AG KGKR +P+A+I+I QP +
Sbjct: 65 SISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQPLIGG 124
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ A+++ I AK + ++ + ++LA+ TG + E + R +M + AKE+G+I
Sbjct: 125 GGISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTADEAKEYGLI 184
Query: 291 DKVLWR 296
D+VL +
Sbjct: 185 DEVLEK 190
>gi|331090536|ref|ZP_08339389.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405879|gb|EGG85407.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 193
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++VA+L++L+ DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSASIIVAQLLHLEAEDPEKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +KC+V T +G A M LLA G KGKRF +P+A+IMI QP +
Sbjct: 70 SVSAGLAIYDTMQYIKCDVSTTCIGMAASMGAFLLAGGAKGKRFALPNAEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R L ++LA+ TG S E ++ R M ++ A+E+G+ID
Sbjct: 130 QG--QATEIQIAAEHILKTRQKLNEILAERTGKSFEQISADTERDNFMSAKEAEEYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVV 190
>gi|335047467|ref|ZP_08540488.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas sp. oral taxon 110 str. F0139]
gi|333761275|gb|EGL38830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas sp. oral taxon 110 str. F0139]
Length = 192
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + +L+VA+L++L+ DPK I +YINS G G
Sbjct: 19 DIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A M LL +G KGKRF +P+A IMI QP +
Sbjct: 70 SVSAGLAIYDTIQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A++ + R TL ++LAK TG S + + K R ++M + AKE+G+ID
Sbjct: 130 QG--QAEDIKIQAQKILQVRATLNQILAKRTGQSLKKIEKDTDRDFYMSAYEAKEYGIID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|406882489|gb|EKD30274.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium (gcode 4)]
Length = 207
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R+V++G + +V V+A+L+YL+ DPKAPI +Y+NS G G
Sbjct: 33 DIYSRLLEDRVVFLGDAIDASVANTVIAQLLYLEKQDPKAPITIYVNSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYD + ++C++ TV VG A M ++LA GTKGKR+ +PH++IMI QP +
Sbjct: 84 HVTAGLAIYDVMQYVQCDIITVCVGLAASMGSIILAGGTKGKRYSLPHSEIMIHQPLGGT 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + L +LAKH+G + V K R +M A ++G+ID
Sbjct: 144 EG--QATDIRIAAEHILKTGGVLYGILAKHSGQDVKKVEKDCDRDNYMTPEEALKYGLID 201
Query: 292 KVL 294
K++
Sbjct: 202 KII 204
>gi|239623656|ref|ZP_04666687.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47_FAA]
gi|239521687|gb|EEQ61553.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47FAA]
Length = 193
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVNDVSASLVVAQLLFLESEDPGKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC+V T+ +G A M LLA G KGKRF +P+++IMI QP +
Sbjct: 70 SVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNSEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R L +LA +TG E + + R +M + AKE+G+ID
Sbjct: 130 KG--QATEIKIVAENILKTRKKLNDILAANTGRPIEVIERDTERDNYMSAEEAKEYGLID 187
Query: 292 KVL 294
+++
Sbjct: 188 EII 190
>gi|150388889|ref|YP_001318938.1| ATP-dependent Clp protease proteolytic subunit [Alkaliphilus
metalliredigens QYMF]
gi|167008644|sp|A6TM61.1|CLPP_ALKMQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149948751|gb|ABR47279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
metalliredigens QYMF]
Length = 194
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L+VA+L++L+ DP I +YINS G G
Sbjct: 19 DIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDIQIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SITAGMAIYDTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I A+ + RDTL K+L + TG E V K R + M+++ AKE+G+ID
Sbjct: 130 RG--QAEDIRIHAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEAKEYGIID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|406875289|gb|EKD25097.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium (gcode 4)]
Length = 197
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 114/190 (60%), Gaps = 13/190 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ + +VA+L++L+ DP I +++N+ G G
Sbjct: 19 DIYSRLLEDRIIFVGEPVAAHMVNSIVAQLLFLEKKDPDKDIIMFVNTPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYD + +KC+V T+ VG A M ++LA GTKGKR+ +PH+KIMI QP
Sbjct: 70 EVYSGMAIYDVMQYVKCDVSTICVGLAASMGSIILAGGTKGKRYSLPHSKIMIHQPLGGI 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD++I+A+E + ++ + L+AKHTG + V + R +++ A ++G+ID
Sbjct: 130 EG--QASDIVIQAEEILKVKNMFIGLMAKHTGQKLDVVANDMDRNKWLNAEEALKYGIID 187
Query: 292 KVLWRGQETI 301
K++ Q+TI
Sbjct: 188 KII--TQDTI 195
>gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
reducens MI-1]
gi|172044337|sp|A4J7L9.1|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 195
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ + LV+A+ ++L+ DP+ I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LLAAG GKR+ +P A+IMI QP
Sbjct: 71 VVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + +D L LA HTG E +T+ R Y M + AK++G+ID
Sbjct: 131 QG--QATDIDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEEAKKYGLID 188
Query: 292 KVL 294
+V+
Sbjct: 189 EVM 191
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21]
gi|259585955|sp|C6E2T0.1|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M21]
Length = 199
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LV+A+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ VG A M LL+ G KGKR+ + +++IMI QP
Sbjct: 69 VVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + +D L LLA+HTG S E V R Y M AK +G+ID
Sbjct: 129 QG--QATDIHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIID 186
Query: 292 KVLWR 296
++ R
Sbjct: 187 AIVTR 191
>gi|95930403|ref|ZP_01313139.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
gi|95133443|gb|EAT15106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 113/187 (60%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++ LV+A+L++L+ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGGIDDQISNLVIAQLLFLESEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ VG A M +LLAAG +GKRF +P+++IMI QP
Sbjct: 70 VVTAGMAIYDTMQYIKAPVSTICVGQAASMGAVLLAAGAEGKRFTLPNSRIMIHQPLGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R+ L ++LA H E + + R + M + A+++G+ID
Sbjct: 130 QG--QASDISIHAQEILRLREDLNRILAHHCSQDIETIARDTERDFFMGAEDAQKYGLID 187
Query: 292 KVLWRGQ 298
K++ R +
Sbjct: 188 KIVMRAE 194
>gi|87302965|ref|ZP_01085769.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282461|gb|EAQ74420.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 200
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 103/174 (59%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LLAAGTKGKR +PHA+IMI QP L + ASD+
Sbjct: 82 DTIQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPHARIMIHQP-LGGTSQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + +D L + LA G S E VTK R Y + + AK++G+ID+V+
Sbjct: 141 EIEAREILRIKDMLNQSLADMCGQSLEKVTKDTDRDYFLSAAEAKDYGLIDRVI 194
>gi|357052921|ref|ZP_09114025.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
clostridioforme 2_1_49FAA]
gi|355386346|gb|EHG33386.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
clostridioforme 2_1_49FAA]
Length = 193
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVSDVSASLVVAQLLFLESEDPGKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC+V T+ +G A M LL+ G KGKRF +P+A+IMI QP +
Sbjct: 70 SVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLSGGAKGKRFALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R L ++LA +TG E + + R +M + AKE+G+ID
Sbjct: 130 KG--QATEIKIVAENILKTRKKLNEILAANTGKPLEVIERDTERDNYMSALEAKEYGLID 187
Query: 292 KVL 294
+++
Sbjct: 188 EII 190
>gi|421858505|ref|ZP_16290772.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410831950|dbj|GAC41209.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 192
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A++++LQ DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDMVANSIIAQMLFLQADDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LL AG+KGKRF +P+++IMI QP +
Sbjct: 70 SITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGSKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ IRA+ + RD L +LA+ TG E + + R Y M + A E+G++D
Sbjct: 130 EG--QASDIEIRARRILKLRDKLNHILAERTGQPLERIERDTDRDYFMSAEEALEYGLVD 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLHK 192
>gi|255657287|ref|ZP_05402696.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|296451860|ref|ZP_06893579.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879744|ref|ZP_06903718.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|296259339|gb|EFH06215.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429215|gb|EFH15088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
Length = 194
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 120/213 (56%), Gaps = 23/213 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
P ++ +Q ERS D+ S LL RI++IG + A+ LVVA+L++L+
Sbjct: 5 PHVIEQTSQGERSY------------DIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP + I +YINS G G + GFAIYDT+ ++C+V T+ +G A M+ L
Sbjct: 53 SEDPDSDIIIYINSPG---------GSVTAGFAIYDTMNYVRCDVSTICIGMAASMSAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA GT GKR+ +P+A+IMI QP + G A+DV I + ++ L ++ +++TG S
Sbjct: 104 LAGGTHGKRYALPNAEIMIHQPMGGAKG--QATDVKIAVDNILKIKERLDRIFSENTGKS 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQ 298
E + + R M + AKE+G+ID ++ R +
Sbjct: 162 IEDIRRDTDRDNFMTALEAKEYGLIDYIMNRNE 194
>gi|343520826|ref|ZP_08757795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
gi|343397784|gb|EGV10318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
Length = 192
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + +L+VA+L++L+ DPK I +YINS G G
Sbjct: 19 DIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A M LL +G KGKRF +P+A IMI QP +
Sbjct: 70 SVSAGLAIYDTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A++ + R TL ++LAK TG S + + K R ++M + AKE+G+ID
Sbjct: 130 QG--QAEDIRIQAQKILQVRATLNEILAKRTGQSLKKIEKDTDRDFYMTAHEAKEYGIID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|303229413|ref|ZP_07316203.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|303231336|ref|ZP_07318070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|401680587|ref|ZP_10812502.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429760069|ref|ZP_19292559.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
gi|302513932|gb|EFL55940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|302515949|gb|EFL57901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|400218495|gb|EJO49375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429178474|gb|EKY19752.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
Length = 197
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V V+A++++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG+A M +LL AG KGKRF +PHA++MI QP
Sbjct: 69 VVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRFALPHARVMIHQPLGGV 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G AS++ I A+E + R+ L +LA +G E V + R M ++ A E+G+ID
Sbjct: 129 QG--QASEIEIHAREILRMREELNGILAARSGQDIEVVARDTDRDNFMSAQDAVEYGLID 186
Query: 292 KVLWR 296
+VL R
Sbjct: 187 EVLTR 191
>gi|160947717|ref|ZP_02094884.1| hypothetical protein PEPMIC_01652 [Parvimonas micra ATCC 33270]
gi|158446851|gb|EDP23846.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas micra ATCC 33270]
Length = 192
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + +L+VA+L++L+ DPK I +YINS G G
Sbjct: 19 DIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A M LL +G KGKRF +P+A IMI QP +
Sbjct: 70 SVSAGLAIYDTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A++ + R TL ++LAK TG S + + K R ++M + AKE+G+ID
Sbjct: 130 QG--QAEDIKIQAQKILQVRATLNEILAKRTGQSLKKIEKDTDRDFYMSAYEAKEYGIID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|329114674|ref|ZP_08243433.1| ATP-dependent Clp protease proteolytic subunit 1 [Acetobacter
pomorum DM001]
gi|326696154|gb|EGE47836.1| ATP-dependent Clp protease proteolytic subunit 1 [Acetobacter
pomorum DM001]
Length = 237
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V L+ A+L+YL+ ++P I YINS G G
Sbjct: 50 DIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPNKEISFYINSPG---------G 100
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ V TV +G A M LLLA G KG+RF +P+A++M+ QP +
Sbjct: 101 VVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNARVMVHQPSGGA 160
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E ++ R L ++ +HTG + E + + + R +M + A+ FG++D
Sbjct: 161 QG--QASDIEIQAREILIIRQKLNEIYREHTGRTLEEIEQKLERDTYMSAHEAQSFGIVD 218
Query: 292 KVL 294
+V+
Sbjct: 219 EVI 221
>gi|86605370|ref|YP_474133.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-3-3Ab]
gi|86553912|gb|ABC98870.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 210
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 13/191 (6%)
Query: 108 TPPPDLPSLLLHGRIVYIGMPLVPA----VTELVVAELMYLQWMDPKAPIYLYINSTGTT 163
TPPPDL SLLL RIVY+G+PL VT+L+V +L+YLQ+ D + PI +YINSTGT
Sbjct: 15 TPPPDLASLLLQERIVYLGLPLAEEANANVTKLIVEQLLYLQYEDREKPIKMYINSTGTY 74
Query: 164 RDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIM 223
D + FAI DT+ +K VHT+ +G AIGMA +LLAAG KG R +P+A I+
Sbjct: 75 SYD-------TAAFAILDTMNYIKPPVHTICIGNAIGMAAMLLAAGAKGFRASLPNATIV 127
Query: 224 IQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRR 283
+ QP + G ASD+ IR +E + R+ +++ L++ TG E + K R + M
Sbjct: 128 LHQPYGGTRG--QASDIEIRTREILTLRNMMLEELSRSTGQPIERIKKDTERLFFMTPEE 185
Query: 284 AKEFGVIDKVL 294
AK +G+ID+VL
Sbjct: 186 AKAYGLIDQVL 196
>gi|323703643|ref|ZP_08115286.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333922902|ref|YP_004496482.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531415|gb|EGB21311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333748463|gb|AEF93570.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 195
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ + LV+A+ ++L+ DP+ I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LLAAG KGKR+ +P A+IMI QP
Sbjct: 71 VVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAKGKRYALPQARIMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ L + L+ HTG E + + R + M + AK++G+ID
Sbjct: 131 QG--QATDIDIHAREILRMREILNERLSHHTGQPLEKIARDTERDFFMSAEEAKKYGIID 188
Query: 292 KVL 294
+V+
Sbjct: 189 EVM 191
>gi|126700971|ref|YP_001089868.1| ATP-dependent Clp protease proteolytic subunit 2 [Clostridium
difficile 630]
gi|254976933|ref|ZP_05273405.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094319|ref|ZP_05323797.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255102503|ref|ZP_05331480.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
gi|255308399|ref|ZP_05352570.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316073|ref|ZP_05357656.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518732|ref|ZP_05386408.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651852|ref|ZP_05398754.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|260684879|ref|YP_003216164.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688537|ref|YP_003219671.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|306521636|ref|ZP_07407983.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362546|ref|YP_006200398.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423089882|ref|ZP_17078228.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252408|emb|CAJ70250.1| ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp
2) [Clostridium difficile 630]
gi|260211042|emb|CBA66381.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214554|emb|CBE07092.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|357557468|gb|EHJ39008.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 119/213 (55%), Gaps = 23/213 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
P ++ Q ERS D+ S LL RI++IG + A+ LVVA+L++L+
Sbjct: 5 PHVIEQTGQGERSY------------DIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP + I +YINS G G + GFAIYDT+ ++C+V T+ +G A M+ L
Sbjct: 53 SEDPDSDIIIYINSPG---------GSATSGFAIYDTMNYVRCDVSTICIGMAASMSAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA GT GKR +P+++IMI QP + G A+DV I + ++ L K+L+++TG S
Sbjct: 104 LAGGTHGKRCALPNSEIMIHQPMGGAKG--QATDVKIAVDNILKIKERLDKILSENTGKS 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQ 298
E + + R M + AKE+G+ID ++ R +
Sbjct: 162 IEDIRRDTDRDNFMTALEAKEYGLIDYIMNRNE 194
>gi|297531315|ref|YP_003672590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
gi|297254567|gb|ADI28013.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
Length = 196
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V +V++L++L DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 SITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + RD L ++L+++TG E + + R M +++A E+G+ID
Sbjct: 130 QG--QATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEYGIID 187
Query: 292 KVLWRGQE 299
+VL R E
Sbjct: 188 RVLTRADE 195
>gi|160936367|ref|ZP_02083736.1| hypothetical protein CLOBOL_01259 [Clostridium bolteae ATCC
BAA-613]
gi|158440650|gb|EDP18388.1| hypothetical protein CLOBOL_01259 [Clostridium bolteae ATCC
BAA-613]
Length = 193
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVNDVSASLVVAQLLFLESEDPGKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC+V T+ +G A M LL+ G KGKRF +P+A+IMI QP +
Sbjct: 70 SVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLSGGAKGKRFALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R L ++LA +TG E + + R +M + AKE+G+ID
Sbjct: 130 KG--QATEIKIVAENILKTRKKLNEILAANTGKPLEVIERDTERDNYMSALEAKEYGLID 187
Query: 292 KVL 294
+++
Sbjct: 188 EII 190
>gi|443324640|ref|ZP_21053379.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
gi|442795739|gb|ELS05087.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
Length = 199
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 100/178 (56%), Gaps = 9/178 (5%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++G + + ++A ++YL D PIYLYINS G G + G
Sbjct: 27 LYRERIIFLGRGVNDGIANQIIAIMLYLDSEDSSKPIYLYINSPG---------GSVTAG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K EV T+ VG A M LLA GTKGKR +PH++IMI QP G
Sbjct: 78 LAIYDTMRHIKSEVVTICVGLAASMGAFLLAGGTKGKRLALPHSRIMIHQPLGGVQGRRQ 137
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I A E + RD L ++LA +TG + K R Y M + AKE+G+ID+V+
Sbjct: 138 ATDIEIEANEILRIRDQLNQMLADNTGKDIAKIAKDTDRDYFMSAAEAKEYGLIDQVI 195
>gi|423082887|ref|ZP_17071470.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423086337|ref|ZP_17074746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357547206|gb|EHJ29100.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357547324|gb|EHJ29214.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
Length = 194
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 113/187 (60%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG + A+ LVVA+L++L+ DP + I +YINS G G
Sbjct: 19 DIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ ++C+V T+ +G A M+ LLA GT+GKR +P+++IMI QP +
Sbjct: 70 STTAGFAIYDTMNYVRCDVSTICIGMAASMSAFLLAGGTRGKRCALPNSEIMIHQPMGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+DV I + ++ L ++L+++TG S E + + R M + AKE+G+ID
Sbjct: 130 KG--QATDVKIAVDNILKIKEQLDRILSENTGKSIEDIRRDTDRDNFMTAIEAKEYGLID 187
Query: 292 KVLWRGQ 298
++ R +
Sbjct: 188 YIMNRNE 194
>gi|268611241|ref|ZP_06144968.1| ATP-dependent Clp protease, protease subunit [Ruminococcus
flavefaciens FD-1]
Length = 196
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 9/185 (4%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+ + + LVVA+L+YL+ DP+ I LYINS G G
Sbjct: 20 DIFSRLLNDRIIMLSDQVNDTTASLVVAQLLYLESQDPEKDISLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +KC+V T+ +G A M LL++G KGKR +P+++IMI QP +
Sbjct: 71 SVTAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLSSGAKGKRIALPNSEIMIHQPLIGG 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+D++I AK R+ L +LA++TG S E + R +M ++ A ++G+ID
Sbjct: 131 GLGGQQTDIMIHAKNMERTRNRLESILAENTGKSVEEIHAACERDNYMTAQEAMDYGLID 190
Query: 292 KVLWR 296
KV+ +
Sbjct: 191 KVIEK 195
>gi|427418142|ref|ZP_18908325.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760855|gb|EKV01708.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 201
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA++++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVTAESSNLIVAQMLFLEAEDPERDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+G I+DT+ +K +V T+ VG A M LL+AGTKGKR +P+++IMI QP +
Sbjct: 68 SVYDGLGIFDTMNHIKPDVSTICVGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + TL LA HTG E +T+ R + M A E+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYIKKTLNDALAAHTGQPIERITEDTERDFFMSPSEAVEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|451948362|ref|YP_007468957.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
gi|451907710|gb|AGF79304.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
Length = 200
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + VT +VA+L++L+ DP I YINS G G
Sbjct: 19 DIYSRLLRERIVFLGTSVGDDVTSSIVAQLLFLEAEDPDKDITFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC++ T+ +G A M LLLAAGT GKR+ +P+++IMI QP
Sbjct: 70 SVTAGLAIYDTMQYVKCDIATLCMGQAASMGALLLAAGTAGKRYALPNSRIMIHQPMGGY 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G AS++ I A+E + RD L K+LA HTG++ + + K R M A+++G+ID
Sbjct: 130 QG--QASEIDIHAQEILRMRDDLNKILAYHTGHTVKKLQKDTDRDNFMSPLEAQKYGIID 187
Query: 292 KVLWRGQE 299
+VL + ++
Sbjct: 188 EVLSKRKD 195
>gi|115459516|ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|113564929|dbj|BAF15272.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|215768496|dbj|BAH00725.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 309
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 102 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG---------G 152
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A MA LLLAAG +G+R +P+A++MI QP +
Sbjct: 153 VVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGA 212
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I AKE + RD L K+ AKHT + + + + + R MD A ++G+ID
Sbjct: 213 SGQ--ASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGLID 270
Query: 292 KVL 294
+V+
Sbjct: 271 EVI 273
>gi|297182365|gb|ADI18531.1| protease subunit of ATP-dependent clp proteases [uncultured SAR406
cluster bacterium HF4000_22B16]
Length = 202
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ +++ L++A+ ++L+ DP IYLYINS G G
Sbjct: 27 DIYSRLLKERIVFLGTPIDDSISSLIIAQFLFLEAEDPDKDIYLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ +G A M LLA G KGKR +P+++IMI QP +
Sbjct: 78 YITAGMAIFDTMNYIKPDVATICMGQASSMGAFLLAGGKKGKRSALPNSRIMIHQPMGGA 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A E + R L KLLAK TG V K R Y M + AK++G+ID
Sbjct: 138 EG--QASDIKIQADEIIRLRGKLNKLLAKQTGQKISKVEKDSDRNYFMSAVEAKKYGIID 195
Query: 292 KVL 294
VL
Sbjct: 196 TVL 198
>gi|428307443|ref|YP_007144268.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
gi|428248978|gb|AFZ14758.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
Length = 228
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V + +VA+L++L+ DP+ I LYINS G G
Sbjct: 41 DIYSRLLRERIIFMGTPVDDTVADSLVAQLLFLESEDPEKDIQLYINSPG---------G 91
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++ +V T+ G A M LL+ G KGKR +P ++IMI QP +
Sbjct: 92 SVTAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQPLGGA 151
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ L +LLA+HTG + +T R + M S AK++G+ID
Sbjct: 152 QG--QAVDIEIQAKEILYHKRVLNELLAEHTGQPIDKITADTERDFFMSSAEAKDYGLID 209
Query: 292 KVLWR 296
+V+ R
Sbjct: 210 QVIDR 214
>gi|406981698|gb|EKE03119.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 207
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L+VA+L++L +P+ I +YINS G G
Sbjct: 25 DIFSRLLRERIIFLGTEIDDQVANLMVAQLLFLDAENPEKDIVMYINSPG---------G 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ ++ T+ +G A M LLAAGT GKR +PH++IMI QP +
Sbjct: 76 VISAGLAIYDTMQHVRADIATMCIGEAASMGSFLLAAGTAGKRMSLPHSRIMIHQPSGGA 135
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+++ A E + + +LLAKHTG S + + + R ++M AKE+G+ID
Sbjct: 136 RG--QASDIMLEAAEIARIKRQMNELLAKHTGQSFKKIEQDSDRDFYMGPEEAKEYGLID 193
Query: 292 KVLWR 296
K++ +
Sbjct: 194 KIITK 198
>gi|411118654|ref|ZP_11391035.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712378|gb|EKQ69884.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 221
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDG---ESVGMES--E 175
RI+++ P+ + +V+ L+YL D PIY+YINS G G ESVG+ S
Sbjct: 30 RIIFLNQPITAGLANSLVSALLYLDSEDQSKPIYIYINSYGDPVAAGMSDESVGLMSVAA 89
Query: 176 GFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL 235
G AIYDT+ +K E+ T+ +G AIGM+ +LL++GTKGKR +PH+ I + + G
Sbjct: 90 GLAIYDTMQHVKSEIVTICLGQAIGMSAVLLSSGTKGKRGSLPHSMIALNHTLSGTRG-- 147
Query: 236 PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
ASD+ + A+E + R ++ +LAK+TG S E + + + R ++M ++AK++G+ID VL
Sbjct: 148 QASDIQVNAQEVIAKRSLILDILAKNTGQSVEKIARDMDRTFYMTPQQAKDYGLIDHVL 206
>gi|210615408|ref|ZP_03290535.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
gi|210150257|gb|EEA81266.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
Length = 193
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + A +++A+L++L+ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVTDASASVIIAQLLFLEGEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +KC+V T+ +G A M LL+ G KGKR+ +P+A+IMI QP +
Sbjct: 70 SVSAGLAIYDTMQYIKCDVSTICIGMAASMGSFLLSGGKKGKRYALPNAEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R L +LA++TG S E + R M ++ AKE+G++D
Sbjct: 130 QG--QATEIQIAAEHILKTRQKLNTILAENTGQSLEKIQADTERDNFMSAQEAKEYGLVD 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|383754373|ref|YP_005433276.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366425|dbj|BAL83253.1| putative ATP-dependent Clp protease proteolytic subunit
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 203
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 112/189 (59%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + +V +VVA++++L+ DP IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGQIDDSVANVVVAQMLFLESEDPDKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M +LL AG KGKRF +P+A++MI QP +
Sbjct: 70 VVTAGLAIYDTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNARVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+A+E R+T+ + TG + E + R M + AK +G++D
Sbjct: 130 QG--QSTDIQIQAREIQRIRETINDIFVSSTGKTAEEINNDTERDNFMTAAEAKAYGIVD 187
Query: 292 KVLWRGQET 300
+V+ R ++T
Sbjct: 188 EVITRPKKT 196
>gi|18203597|sp|Q9X5N0.1|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus xanthus
DZF1]
Length = 206
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 106/182 (58%), Gaps = 11/182 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G + V ++VA+L++L+ DP I LYINS G G
Sbjct: 21 DIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ VG A M +LL AG KGKR+ +P ++IMI QP
Sbjct: 72 SVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGV 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L +L+ KHTG S E V K R Y M + AK +G+ID
Sbjct: 132 RG--QATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIID 189
Query: 292 KV 293
++
Sbjct: 190 EI 191
>gi|70727122|ref|YP_254036.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
haemolyticus JCSC1435]
gi|124013829|sp|Q4L4J5.1|CLPP_STAHJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68447846|dbj|BAE05430.1| clpP [Staphylococcus haemolyticus JCSC1435]
Length = 195
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L K+LA+ TG S E + K R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAKEYGLID 187
Query: 292 KVLW 295
V+
Sbjct: 188 NVMQ 191
>gi|355676848|ref|ZP_09060344.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
citroniae WAL-17108]
gi|354813437|gb|EHE98048.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
citroniae WAL-17108]
Length = 193
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVNDVSASLVVAQLLFLESEDPGKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC+V T+ +G A M LLA G KGKRF +P+++IMI QP +
Sbjct: 70 SVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNSEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R L +LA +TG E + + R +M + AKE+G+ID
Sbjct: 130 KG--QATEIKIVAENILKTRKKLNDILAANTGRPIEVIERDTERDNYMSAAEAKEYGLID 187
Query: 292 KVL 294
+++
Sbjct: 188 EII 190
>gi|138896648|ref|YP_001127101.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermodenitrificans NG80-2]
gi|196249350|ref|ZP_03148048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. G11MC16]
gi|166201825|sp|A4ISQ2.1|CLPP_GEOTN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134268161|gb|ABO68356.1| ATP-dependent Clp protease [Geobacillus thermodenitrificans NG80-2]
gi|196211107|gb|EDY05868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. G11MC16]
Length = 196
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +V++L++L DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P++++MI QP +
Sbjct: 70 SITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + RD L ++LA++TG E + + R M +++A+E+G+ID
Sbjct: 130 QG--QATEIEIAAKRILFLRDKLNRILAENTGQPIEVIERDTDRDNFMTAQKAQEYGIID 187
Query: 292 KVLWR 296
+VL R
Sbjct: 188 RVLTR 192
>gi|428771384|ref|YP_007163174.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685663|gb|AFZ55130.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 199
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 12/192 (6%)
Query: 106 PDTPPPDLPSL---LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGT 162
P P D ++ L RI+++G + ++ ++A ++YL D PIYLYINS G
Sbjct: 13 PGQPYSDWVNIYDRLYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNSKPIYLYINSPG- 71
Query: 163 TRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKI 222
G + G AIYDT+ +K EV T+ VG A M LL+AGTKGKR +PH++I
Sbjct: 72 --------GSVTAGLAIYDTMQHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPHSRI 123
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
MI QP G A+D+ I AKE + + L +++A HTG E + K R Y M +
Sbjct: 124 MIHQPLGGIQGRRQATDIEIEAKEILRIKHDLNEMMALHTGQPIEKIEKDTDRDYFMSAA 183
Query: 283 RAKEFGVIDKVL 294
AKE+G+IDKV+
Sbjct: 184 EAKEYGLIDKVI 195
>gi|193212075|ref|YP_001998028.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobaculum
parvum NCIB 8327]
gi|193085552|gb|ACF10828.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobaculum
parvum NCIB 8327]
Length = 225
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V L++A+L++L+ DP+ IY+Y+NS G G
Sbjct: 44 DIFSRLLRERIIFLGSPIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G IYDT+ ++ ++ TV VG A M LLA+GT GKR +PH++IMI QP +
Sbjct: 95 SVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLLASGTAGKRASLPHSRIMIHQPSGGA 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +D+LI+A+E R L LLAKHTG + + + + R M++ AKE+G+ID
Sbjct: 155 QG--QETDILIQAREIEKIRHLLEDLLAKHTGQNVKTIREDSERDRWMNATEAKEYGLID 212
Query: 292 KVLWR 296
++ +
Sbjct: 213 QIFEK 217
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|338533213|ref|YP_004666547.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|116270726|sp|Q1DAT0.1|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
gi|337259309|gb|AEI65469.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 206
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 106/182 (58%), Gaps = 11/182 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G + V ++VA+L++L+ DP I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ VG A M +LL AG KGKR+ +P ++IMI QP
Sbjct: 72 SVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGV 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L +L+ KHTG S E V K R Y M + AK +G+ID
Sbjct: 132 RG--QATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIID 189
Query: 292 KV 293
++
Sbjct: 190 EI 191
>gi|428779425|ref|YP_007171211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428693704|gb|AFZ49854.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 199
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + L+VA+++YL+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDDEIGNLIVAQMLYLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQVRPDVSTICLGLAASMGAFLLSAGAKGKRLSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L L++HTG E + + R + M + + E+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKQQLNHYLSEHTGQPLERIEEDTERDFFMSPQESMEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 RVIER 190
>gi|388512413|gb|AFK44268.1| unknown [Lotus japonicus]
Length = 243
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ I P+ +VVA+L++L+ +P PI +Y+NS G G
Sbjct: 50 DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPG---------G 100
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ ++T+ +G A M LLLAAG KG+R +P+A IMI QP
Sbjct: 101 AVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLAAGAKGQRRSLPNASIMIHQPSGGY 160
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A D+ I K+ + D L L AKHTG S E + K + R Y M AKEFG+ID
Sbjct: 161 SG--QAKDIAIHTKQIVRVWDLLNDLYAKHTGQSIELIQKNMDRDYFMTPEEAKEFGLID 218
Query: 292 KVLWRGQETIMAEVAPPEEWDK 313
+V+ + T++++ E DK
Sbjct: 219 EVIDQRPMTLVSDAVGNEGKDK 240
>gi|56421597|ref|YP_148915.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
kaustophilus HTA426]
gi|261420500|ref|YP_003254182.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
Y412MC61]
gi|319768169|ref|YP_004133670.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
gi|375010197|ref|YP_004983830.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448239320|ref|YP_007403378.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
GHH01]
gi|67460172|sp|Q5KVD9.1|CLPP_GEOKA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56381439|dbj|BAD77347.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Geobacillus kaustophilus HTA426]
gi|261376957|gb|ACX79700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC61]
gi|317113035|gb|ADU95527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
gi|359289046|gb|AEV20730.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445208162|gb|AGE23627.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
GHH01]
Length = 196
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V +V++L++L DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 SITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + RD L ++L+++TG E + + R M +++A E+G+ID
Sbjct: 130 QG--QATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEYGIID 187
Query: 292 KVLWRGQE 299
+VL R E
Sbjct: 188 RVLTRADE 195
>gi|261494048|ref|ZP_05990551.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496191|ref|ZP_05992597.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308143|gb|EEY09440.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310214|gb|EEY11414.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 197
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ G A M LL+AG KGKRF +PHA+IMI QP +
Sbjct: 70 VVTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + + TL +A+H+G S E V R M + A E+G+ID
Sbjct: 130 RG--QATDIQIQAEEILRLKATLTHRMAEHSGQSYEKVLADTERDNFMSAEEAAEYGLID 187
Query: 292 KVL 294
KVL
Sbjct: 188 KVL 190
>gi|325680788|ref|ZP_08160326.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus albus 8]
gi|324107568|gb|EGC01846.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus albus 8]
Length = 196
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 112/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+ + P+ V LV A+L++L+ DP+ I LYINS G G
Sbjct: 19 DIFSRLLNDRIIMLCEPIDDHVASLVTAQLLFLESQDPEKDIDLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V+T+ +G A M LL+ GTKGKRF +P+++IMI QP +
Sbjct: 70 SVTAGMAIYDTMNYIKCDVNTICMGMAASMGAFLLSCGTKGKRFSLPNSEIMIHQPLIGG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ +DV I + + R+ L K+LA++TG S E + R ++ ++ A E+G+I
Sbjct: 130 GGISGQCTDVKIHSDHLVATREKLNKILAENTGKSIEQIAIDTERDNYLSAQEAMEYGLI 189
Query: 291 DKVLWR 296
DKV+ +
Sbjct: 190 DKVISK 195
>gi|219113871|ref|XP_002186519.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583369|gb|ACI65989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 223
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 125/227 (55%), Gaps = 25/227 (11%)
Query: 83 YDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELM 142
Y P ++ S A ERS D+ S LL RI+ + + + LV A+L+
Sbjct: 17 YTVPIVLESGALGERSF------------DIYSRLLRERIICVHGEVSDHMASLVTAQLL 64
Query: 143 YLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMA 202
+L+ P+ P+Y+YINS G G+ + G A+YDT+ ++ +VHT+ +G A M
Sbjct: 65 FLEAEHPEKPVYMYINSPG---------GLVTAGMAMYDTMQYIRPDVHTICMGQAASMG 115
Query: 203 CLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHT 262
LLLA GT G RF +P+++IM+ QP + G+ A+D+ I+A+E + R L +L HT
Sbjct: 116 SLLLAGGTPGCRFALPNSRIMLHQPSGGAQGM--AADIDIQAREILRTRANLNRLYVHHT 173
Query: 263 GNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPE 309
G + + + R Y +D +AK+FGVID+VL + AE A PE
Sbjct: 174 GQELSEIERVMDRDYFLDVHQAKKFGVIDQVLDKRHRD--AEDAAPE 218
>gi|392407107|ref|YP_006443715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
gi|390620243|gb|AFM21390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
Length = 192
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + LVVA++++L+ DP I LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGDVIEDHIANLVVAQMLFLESEDPDKDINLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ +KC + T+ VG A MA +LLAAGTKGKR +P++++M+ QP
Sbjct: 69 SVTAGLGIYDTMQYIKCPISTICVGQAASMAAVLLAAGTKGKRIALPNSRVMLHQPLGGV 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE RD L +++AKHT E V + R + M + A +G++D
Sbjct: 129 QG--QATDIEIHAKEIKKIRDRLNEIIAKHTNQDIEKVARDTDRDFFMSAEEALSYGIVD 186
Query: 292 KVLWR 296
KV+ +
Sbjct: 187 KVIEK 191
>gi|326403118|ref|YP_004283199.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
multivorum AIU301]
gi|338981066|ref|ZP_08632302.1| ClpP [Acidiphilium sp. PM]
gi|325049979|dbj|BAJ80317.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
multivorum AIU301]
gi|338208032|gb|EGO95931.1| ClpP [Acidiphilium sp. PM]
Length = 209
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V L+ A+L++L+ +P I YINS G G
Sbjct: 29 DIFSRLLKERIIFLTGPVYDQVGSLIAAQLLFLESENPSKEIAFYINSPG---------G 79
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ +K V TV +G A M LLLAAG KGKRF +P+++IM+ QP +
Sbjct: 80 VVSAGLAIYDTMQYIKSPVSTVCIGQAASMGSLLLAAGEKGKRFALPNSRIMVHQPSGGA 139
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R L + HTG S E + + + R M + A+EFG++D
Sbjct: 140 QG--QASDIEIQAREILTLRRRLNDIYVTHTGQSLEAIEQALERDRFMSANEAQEFGLVD 197
Query: 292 KVLWR 296
+V+ +
Sbjct: 198 EVVEK 202
>gi|308271899|emb|CBX28507.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Desulfobacterium sp.]
Length = 206
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L++A+L++L+ DP I YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTAMNDEVANLLIAQLLFLESEDPDKDINFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G A+YDT+ +K ++ TV +G A M LLL AG KGKR+ +P+A+I+I QP
Sbjct: 70 VVTSGLAVYDTMQYIKSDIATVCIGQAASMGALLLTAGAKGKRYALPNARILIHQPMGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + +DTL +L HTG + + R Y M + A+E+G+ID
Sbjct: 130 QG--QASDIAIQAREILRMKDTLNDILTFHTGKDLKQIQVDTDRDYFMSGKEAEEYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 HVI 190
>gi|218289882|ref|ZP_03494072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|258511244|ref|YP_003184678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384134931|ref|YP_005517645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|218240022|gb|EED07208.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|257477970|gb|ACV58289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289016|gb|AEJ43126.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 192
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V VVA+L++L DP I +YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDDVANAVVAQLLFLAADDPDKDIQMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ VG A MA +LLAAG KGKR+ +P++++MI QP +
Sbjct: 70 SVSAGLAIYDTMQHIKPDVSTMCVGMAASMAAVLLAAGAKGKRYALPNSEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+ + R+ L ++LA+ TG E V + R M + AK +G+ID
Sbjct: 130 RG--QASDIEIHARHILKTRERLNRILAERTGQPLERVAQDTDRDNFMSAEEAKAYGLID 187
Query: 292 KVLWR 296
+V++R
Sbjct: 188 EVIYR 192
>gi|38344435|emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group]
gi|116310954|emb|CAH67891.1| OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa Indica Group]
gi|125549084|gb|EAY94906.1| hypothetical protein OsI_16707 [Oryza sativa Indica Group]
Length = 259
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 52 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG---------G 102
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A MA LLLAAG +G+R +P+A++MI QP +
Sbjct: 103 VVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGA 162
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I AKE + RD L K+ AKHT + + + + + R MD A ++G+ID
Sbjct: 163 SG--QASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGLID 220
Query: 292 KVL 294
+V+
Sbjct: 221 EVI 223
>gi|443315108|ref|ZP_21044618.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785290|gb|ELR95120.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 206
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 104/178 (58%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++ + ++ +VA L+YL D PIYLYINS G G + G
Sbjct: 27 LFRERIIFLSEEVTDSIANAIVAYLLYLDSEDNTKPIYLYINSPG---------GSVTAG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K EV T+ VG A M LLAAGTKGKR +PHA+IMI QP + G
Sbjct: 78 MAIYDTMQYIKAEVITICVGLAASMGAFLLAAGTKGKRTALPHARIMIHQPLSGARG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I AKE + + TL K+LA+ TG + E + + R Y + ++ A +G+ID+V+
Sbjct: 136 ATDIEIEAKEVLRVKHTLNKMLAERTGKTLEEIERDTDRDYFLSAQEAARYGLIDRVI 193
>gi|365841793|ref|ZP_09382847.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Flavonifractor plautii ATCC 29863]
gi|373115371|ref|ZP_09529545.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 7_1_58FAA]
gi|364576945|gb|EHM54240.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Flavonifractor plautii ATCC 29863]
gi|371670437|gb|EHO35518.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 193
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 106/184 (57%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RIV++G + LVVA+L+YL+ DP I YINS G G
Sbjct: 19 DIFSRLLNDRIVFLGEEVNATTASLVVAQLLYLEAQDPDKDIQFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
++G AIYDT+ +KC+V T+ +G A M LL++G KGKR +P+A+IMI QP +
Sbjct: 70 SVTDGMAIYDTMQYIKCDVSTICIGMAASMGAFLLSSGAKGKRLALPNAEIMIHQPSAGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G + +D+ I K + + + +LA +TG E VT R M + AKE+G+ID
Sbjct: 130 QGQI--TDMAIHLKRLEIIKKRMNHILADNTGKPLEVVTADCERDNFMSAEEAKEYGLID 187
Query: 292 KVLW 295
KV++
Sbjct: 188 KVIY 191
>gi|189424987|ref|YP_001952164.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
lovleyi SZ]
gi|226706453|sp|B3E1Z4.1|CLPP_GEOLS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189421246|gb|ACD95644.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
lovleyi SZ]
Length = 197
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V +LV+A+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKERIVFLGGEINDQVADLVIAQLLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AI+DT+ +K V T+ +G A M +LL AG KGKRF +PHA+IMI QP S
Sbjct: 69 VVTAGMAIFDTMNYIKAPVSTICIGQAASMGAVLLTAGEKGKRFALPHARIMIHQPSGGS 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D++I+A+E + + L +LLA +G E + + R + M + A+ +G+ID
Sbjct: 129 RG--QATDIMIQAEEILRMKRELNRLLADLSGQPVERLEQDTERDFFMSAEEARNYGLID 186
Query: 292 KVLWR 296
V+ R
Sbjct: 187 AVMTR 191
>gi|162451419|ref|YP_001613786.1| endopeptidase Clp [Sorangium cellulosum So ce56]
gi|161162001|emb|CAN93306.1| Endopeptidase Clp [Sorangium cellulosum So ce56]
Length = 214
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
++ S LL RIV+IG + V V+A+ ++L+ DP+ I +YINS G G
Sbjct: 38 NIFSRLLKDRIVFIGTEIDDFVANAVIAQFLFLESEDPEKEIQVYINSPG---------G 88
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G A+YDT+ ++C V T+ +G A M +LL AG KG+RF +PHA++MI QP +
Sbjct: 89 VVTSGLAMYDTMQYVRCPVSTMCIGQAASMGAVLLGAGRKGRRFALPHARMMIHQPLGGA 148
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E ++TL+ +L TG + + + K I R +++ + +AKE+G+ID
Sbjct: 149 RG--QATDIEIQAREIKKIKETLIDILVDATGKNRDELAKDIERDFYLSATQAKEYGLID 206
Query: 292 KVL 294
+V
Sbjct: 207 EVF 209
>gi|21674371|ref|NP_662436.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
gi|25008303|sp|Q8KC73.1|CLPP_CHLTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21647550|gb|AAM72778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
Length = 225
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V L++A+L++L+ DP+ IY+YINS G G
Sbjct: 44 DIFSRLLRERIIFLGSPIDEHVAGLIIAQLIFLESEDPERDIYIYINSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G IYDT+ ++ ++ TV VG A M LLA+GT GKR +PH++IMI QP +
Sbjct: 95 SVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLLASGTSGKRASLPHSRIMIHQPSGGA 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +D+LI+A+E R L LLAKHTG + + R M + AKE+G+ID
Sbjct: 155 QG--QETDILIQAREIEKIRHLLEDLLAKHTGQEVSRIREDSERDRWMSAVEAKEYGLID 212
Query: 292 KVLWR 296
++ +
Sbjct: 213 QIFEK 217
>gi|148259928|ref|YP_001234055.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
cryptum JF-5]
gi|146401609|gb|ABQ30136.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidiphilium
cryptum JF-5]
Length = 211
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V L+ A+L++L+ +P I YINS G G
Sbjct: 31 DIFSRLLKERIIFLTGPVYDQVGSLIAAQLLFLESENPSKEIAFYINSPG---------G 81
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ +K V TV +G A M LLLAAG KGKRF +P+++IM+ QP +
Sbjct: 82 VVSAGLAIYDTMQYIKSPVSTVCIGQAASMGSLLLAAGEKGKRFALPNSRIMVHQPSGGA 141
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R L + HTG S E + + + R M + A+EFG++D
Sbjct: 142 QG--QASDIEIQAREILTLRRRLNDIYVTHTGQSLEAIEQALERDRFMSANEAQEFGLVD 199
Query: 292 KVLWR 296
+V+ +
Sbjct: 200 EVVEK 204
>gi|374604920|ref|ZP_09677867.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
gi|374389443|gb|EHQ60818.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
Length = 192
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A++++LQ DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLQADDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LL AG KGKRF +P+++IMI QP +
Sbjct: 70 SITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ IRA+ + RD L +LA+ TG + + + R Y M + A E+G++D
Sbjct: 130 EG--QASDIEIRARRILKMRDKLNHILAERTGQPLDRIERDTDRDYFMSAEEALEYGLVD 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLHK 192
>gi|434393186|ref|YP_007128133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265027|gb|AFZ30973.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 197
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + ++A ++YL DP IYLYINS G G
Sbjct: 22 DIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
M + G AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP +
Sbjct: 73 MVTSGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L ++ A +TG E + K + R + M + AK++G+ID
Sbjct: 133 RG--QATDIEIEAREILRIRHQLNQIYADNTGQPLEKIEKDMDRDFFMSAEEAKQYGLID 190
Query: 292 KVL 294
KV+
Sbjct: 191 KVI 193
>gi|239828281|ref|YP_002950905.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
WCH70]
gi|259585956|sp|C5D7M9.1|CLPP_GEOSW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239808574|gb|ACS25639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. WCH70]
Length = 196
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ V +V++L++L DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 SITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + RD L ++LA++TG E + + R M +++A+E+G+ID
Sbjct: 130 QG--QATEIEIAAKRILFLRDKLNRILAENTGQPVEVIERDTDRDNFMTAQKAQEYGIID 187
Query: 292 KVLWRGQE 299
+VL R E
Sbjct: 188 RVLTRIDE 195
>gi|339021745|ref|ZP_08645737.1| Clp protease proteolytic subunit ClpP [Acetobacter tropicalis NBRC
101654]
gi|338751241|dbj|GAA09041.1| Clp protease proteolytic subunit ClpP [Acetobacter tropicalis NBRC
101654]
Length = 234
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V L+ A+L+YL+ ++P I YINS G G
Sbjct: 46 DIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPTKEISFYINSPG---------G 96
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ V TV +G A M LLLA G KG R+ +P+A++M+ QP +
Sbjct: 97 VVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGHRYALPNARVMVHQPSGGA 156
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE ++ R L ++ +HTG + E + + + R +M + A+ FG++D
Sbjct: 157 QG--QASDIEIQAKEILIIRQRLNEIYREHTGQTLEDIEQKLERDSYMSAEEAQSFGIVD 214
Query: 292 KVL 294
KV+
Sbjct: 215 KVI 217
>gi|149194680|ref|ZP_01871775.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
gi|149135103|gb|EDM23584.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
Length = 196
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + L+VA+L++L+ +P+ IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLQGEINDHTASLIVAQLLFLEAENPEKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GFAIYDT+ +K +V T+ +G A M LL++G KGKRF +PHA+IMI QP +
Sbjct: 71 VVTSGFAIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGKRFALPHARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + + L K+LA++TG S + K R + M + A ++G+ID
Sbjct: 131 QG--QATDIEIHAKEILRMKKELNKILAENTGQSVRKIEKDTERDFFMSAEEAMKYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLKK 193
>gi|320354136|ref|YP_004195475.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
gi|320122638|gb|ADW18184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
Length = 200
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 108/188 (57%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LVVA+L++L+ DP I YINS G G
Sbjct: 19 DIYSRLLKERIIFLGTQVNDDVASLVVAQLLFLEAEDPDKDITFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++C+V T+ +G A M LLLA+G GKRF +P+++IMI QP
Sbjct: 70 SVTAGMAIYDTMQYIRCDVATLCMGQAASMGALLLASGAAGKRFALPNSRIMIHQPMGGY 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L +LA+HTG S + + R M + A E+G+ID
Sbjct: 130 QG--QATDIDIHAREILRMRHDLNTILARHTGKSMKKIQADTERDNFMSATEACEYGIID 187
Query: 292 KVLWRGQE 299
KVL +E
Sbjct: 188 KVLTNREE 195
>gi|125591043|gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japonica Group]
Length = 221
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 14 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A MA LLLAAG +G+R +P+A++MI QP +
Sbjct: 65 VVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I AKE + RD L K+ AKHT + + + + + R MD A ++G+ID
Sbjct: 125 SG--QASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGLID 182
Query: 292 KVL 294
+V+
Sbjct: 183 EVI 185
>gi|392395333|ref|YP_006431935.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390526411|gb|AFM02142.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 202
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V L+VA++++L+ DP+ I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPVTDDVANLIVAQMLFLEAEDPEKDIFLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ +VHT+ VG A M LL AG KGKR +P+A+I+I QP +
Sbjct: 71 SISAGMAIYDTMQYIRSDVHTICVGLAASMGAFLLTAGAKGKRSALPNAEILIHQPLIGG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ A+++ I AK + ++ + ++LA+ TG + E + R +M + AKE+G+I
Sbjct: 131 GGISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEEAKEYGLI 190
Query: 291 DKVLWR 296
D+V +
Sbjct: 191 DEVFEK 196
>gi|374997740|ref|YP_004973239.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
gi|357216106|gb|AET70724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
Length = 204
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LVVA++++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGAIDDDVANLVVAQMLFLEAEDPEKDINLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ +G A M LLA+G KGKR +P+A+++I QP +
Sbjct: 71 SITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLASGAKGKRAALPNAEVLIHQPLIGG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL A+++ I AK+ + RD + ++LA+ TG E + K R Y+M + AKE+G+I
Sbjct: 131 HGLSGQATEIEIHAKQLLRTRDKMNRILAERTGQPLEKIEKDTDRDYYMTAGEAKEYGII 190
Query: 291 DKV 293
D+V
Sbjct: 191 DQV 193
>gi|302337810|ref|YP_003803016.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta
smaragdinae DSM 11293]
gi|301634995|gb|ADK80422.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Spirochaeta
smaragdinae DSM 11293]
Length = 205
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ + A +LVVA+L++L+ +DP+ I LYINS G G
Sbjct: 24 DIFSRLLKDRIVFLDGEINDATADLVVAQLLFLESLDPERDISLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A MA L+L G+ GKRF +P ++I+I QP +
Sbjct: 75 SVTAGLAIYDTIQYIKPDVQTICMGQAASMAALMLTCGSTGKRFALPSSRILIHQPWGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + + ++ ++HTG EE + + + R Y + + A +G+ID
Sbjct: 135 QG--QAVDIGIQAKEIVRLKQLTIRYFSQHTGKGEEVIARDLERDYFLSAEEAVAYGIID 192
Query: 292 KVLWR 296
KVL R
Sbjct: 193 KVLVR 197
>gi|354559730|ref|ZP_08978975.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
metallireducens DSM 15288]
gi|353540550|gb|EHC10024.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
metallireducens DSM 15288]
Length = 204
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V L+VA+L++L+ DP+ I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPIDDDVANLIVAQLLFLEAEDPEKDIFLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ +VHT+ VG A M LL +G KGKR +P+A+I+I QP +
Sbjct: 71 SISAGMAIYDTMQYIRPDVHTICVGLAASMGAFLLTSGAKGKRTALPNAEILIHQPLIGG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ A++V I AK + R + ++LA+ TG + E + R ++M + AKE+G++
Sbjct: 131 GGISGQATEVEIHAKHLLQVRARMNRILAERTGQTVEKIEADTERDHYMTADEAKEYGLV 190
Query: 291 DKVLWR 296
D+VL +
Sbjct: 191 DEVLEK 196
>gi|189502525|ref|YP_001958242.1| hypothetical protein Aasi_1180 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497966|gb|ACE06513.1| hypothetical protein Aasi_1180 [Candidatus Amoebophilus asiaticus
5a2]
Length = 224
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S L+ RI+++GMP+ ++ ++VA+L++L+ DPK + LYINS G G
Sbjct: 48 DVFSRLIMDRIIFLGMPVDDHISNIIVAQLLFLESTDPKKDVRLYINSPG---------G 98
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G IYDT+ + +VHT+ G A MA +LLA G KR+ +PH++I+I QP +
Sbjct: 99 SVYPGLGIYDTMQYIAPDVHTICTGLAASMAAVLLAGGAHKKRYALPHSRILIHQPLGGA 158
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I K+ + + L ++LAKHTG S+ + K R Y M + AKE+G+ID
Sbjct: 159 QG--QASDMEITVKQMLEIKRDLYQILAKHTGKSQGKLEKDGDRDYWMRASEAKEYGIID 216
Query: 292 KVLWRGQE 299
+VL + +
Sbjct: 217 EVLEKNNQ 224
>gi|315650622|ref|ZP_07903682.1| ATP-dependent Clp protease proteolytic subunit [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315487119|gb|EFU77441.1| ATP-dependent Clp protease proteolytic subunit [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 193
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ S ++ ER+ D+ S LL RI+++G + LVVA++++L+
Sbjct: 5 PTVIESTSRGERAF------------DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP I LYINS G G G AIYDT+ +KC+V T+ +G A MA L
Sbjct: 53 SEDPTKDINLYINSPG---------GSVVAGMAIYDTMQYVKCDVSTICMGMAASMAAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA GTKGKR+ +P+A+IMI QP + G A+++ I A++ + R+ + K+LA++T
Sbjct: 104 LAGGTKGKRYALPNAEIMIHQPSGGAQG--QATEIRIAAEQILKTREKMNKILAENTNQP 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E + + R +M ++ A ++G+IDKV+
Sbjct: 162 IEVIERDTERDNYMSAKEALDYGIIDKVI 190
>gi|308067009|ref|YP_003868614.1| ATP-dependent Clp protease proteolytic subunit(endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305856288|gb|ADM68076.1| ATP-dependent Clp protease proteolytic subunit(Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 193
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V ++A++++L DP+ I+LYINS G G
Sbjct: 14 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ VG A M LL AG KGKRF +P+++IMI QP +
Sbjct: 65 SITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L ++LA TG E + K R Y M + AKE+G+ID
Sbjct: 125 QG--QATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIID 182
Query: 292 KVL 294
KVL
Sbjct: 183 KVL 185
>gi|262066529|ref|ZP_06026141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294783780|ref|ZP_06749104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|358467634|ref|ZP_09177325.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|291379763|gb|EFE87281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294480658|gb|EFG28435.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|357067511|gb|EHI77623.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 193
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 23/213 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V ++A+L+YL
Sbjct: 3 NPTVIDNNGKSERAY------------DIYSRLLKDRIIFVGTAIDENVANSIIAQLLYL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP+ I +YINS G G ++G AIYDT+ +K +V TV VG A M
Sbjct: 51 ESEDPEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAF 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LL++G KGKRF + +++IMI QP L S GL A+D+ I A E + +D L +LLA++TG
Sbjct: 102 LLSSGAKGKRFALENSRIMIHQP-LISGGLKGQATDISIHANELLKIKDRLAELLARNTG 160
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++E + R ++ S A +G+ID V R
Sbjct: 161 KTKEQILNDTERDNYLSSEEAVRYGLIDSVFRR 193
>gi|238018907|ref|ZP_04599333.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
gi|237864391|gb|EEP65681.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
Length = 197
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V V+A++++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG+A M +LL AG KGKR+ +PHA++MI QP
Sbjct: 69 VVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMIHQPLGGV 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G AS++ I A+E + R+ L +LA +G E V + R M ++ A E+G+ID
Sbjct: 129 QG--QASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLID 186
Query: 292 KVLWR 296
+VL R
Sbjct: 187 EVLTR 191
>gi|406981668|gb|EKE03092.1| hypothetical protein ACD_20C00261G0002 [uncultured bacterium]
Length = 203
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V L+VA+L+ L +P+ I LYINS G G
Sbjct: 19 DIFSRLLRERIIFLGTPVDDMVANLIVAQLLLLDSENPEKDIMLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V+T+ +G A M LLAAGT GKR +PH++++I QP +
Sbjct: 70 SVTAGLAIYDTMQHIRADVNTICLGQAASMGAFLLAAGTPGKRMALPHSRVLIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A E + TL +LLAKHTG S + + K R Y M + A E+G++D
Sbjct: 130 QG--QATDIEIQAAEIGRIKRTLNELLAKHTGQSFKKIEKDTDRDYIMTPQEALEYGMVD 187
Query: 292 KVLWR 296
KV+ +
Sbjct: 188 KVITK 192
>gi|340753245|ref|ZP_08690034.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|422314997|ref|ZP_16396444.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
gi|229422844|gb|EEO37891.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|404593038|gb|EKA94701.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
Length = 193
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 23/213 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V ++A+L+YL
Sbjct: 3 NPTVIDNNGKSERAY------------DIYSRLLKDRIIFVGTAIDENVANSIIAQLLYL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP+ I +YINS G G ++G AIYDT+ +K +V TV VG A M
Sbjct: 51 ESEDPEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAF 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LL++G KGKRF + +++IMI QP L S GL A+D+ I A E + +D L +LLA++TG
Sbjct: 102 LLSSGAKGKRFALENSRIMIHQP-LISGGLKGQATDISIHANELLKIKDRLAELLARNTG 160
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
++E + R ++ S A +G+ID V R
Sbjct: 161 KTKEQILNDTERDNYLSSEEAVRYGLIDSVFKR 193
>gi|225419706|ref|ZP_03762009.1| hypothetical protein CLOSTASPAR_06044 [Clostridium asparagiforme
DSM 15981]
gi|225041643|gb|EEG51889.1| hypothetical protein CLOSTASPAR_06044 [Clostridium asparagiforme
DSM 15981]
Length = 198
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 110/188 (58%), Gaps = 10/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L++AEL++L+ DP+ + YINS G G
Sbjct: 19 DIYSRLLSDRIIFLGEEVSETSASLIIAELLFLEAQDPQKDVQFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ ++C+V T+ +G A LLA GT+GKR +P+++IMI QP +
Sbjct: 70 SVTAGFAIYDTMRHIRCDVSTICIGLAASFGAFLLAGGTRGKRLALPNSQIMIHQPAMSG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ PASD+LI + +R L ++LA++TG++ + + R M + A E+G+I
Sbjct: 130 RGIQGPASDILIMSDYMQKSRQRLNRILAENTGHTPLEIERDTERDNFMSAEEALEYGLI 189
Query: 291 DKVLWRGQ 298
D ++ + Q
Sbjct: 190 DSIIAKRQ 197
>gi|71083579|ref|YP_266298.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1062]
gi|91762000|ref|ZP_01263965.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1002]
gi|115311789|sp|Q4FM94.1|CLPP_PELUB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71062692|gb|AAZ21695.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1062]
gi|91717802|gb|EAS84452.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1002]
Length = 203
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V LV A+L++L+ DPK I LYINS G G
Sbjct: 28 DIYSRLLKERIIFLVGPINDNVASLVTAQLLFLESEDPKKEINLYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G IYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IM+ QP
Sbjct: 79 LVTAGLGIYDTMQYIKPDVSTLCIGQAASMGSFLLAAGKKGKRFSLPNSRIMVHQPSAGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A E + + L ++ +KHTG S + V K + R M AKEFG+ID
Sbjct: 139 QG--QATDIEIHANEVLALKKRLNEIYSKHTGKSVDDVKKALERDNFMTPDTAKEFGLID 196
Query: 292 KVL 294
+V+
Sbjct: 197 EVV 199
>gi|157273309|gb|ABV27208.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum]
Length = 199
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL I++I P+ V LVVA+L++L+ DP+ I +YINS G G
Sbjct: 24 DIYSRLLKDNIIFISTPIDDTVASLVVAQLLFLESEDPERDISIYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K ++ T VG M LLLAAGTKGKR+ +PH++I+I QP +
Sbjct: 75 SVTAGMAIYDTMQFVKPDIVTFCVGQCASMGALLLAAGTKGKRYALPHSRILIHQPSGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+LI+A+E R+ +LAKHTG E + + R M + +A E+G++D
Sbjct: 135 QG--QATDILIQAEEIKRIRELTSTILAKHTGKPFEVIEADVERDRIMSATQAMEYGIVD 192
Query: 292 KVL 294
+VL
Sbjct: 193 QVL 195
>gi|386285277|ref|ZP_10062493.1| ATP-dependent Clp protease proteolytic subunit [Sulfurovum sp. AR]
gi|385343796|gb|EIF50516.1| ATP-dependent Clp protease proteolytic subunit [Sulfurovum sp. AR]
Length = 195
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + V VVA+L++L+ DP IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDQVASTVVAQLLFLEAQDPDKDIYFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +++DT+ +K ++ T+ +G A M LL++GTKGKR+ +PHA+IMI QP +
Sbjct: 70 VITSGLSMFDTMNYIKPDIVTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+A+E +DTL ++LA+ TG + + + K R M +R A E+G+ID
Sbjct: 130 QG--QSTDIQIQAQEIQRLKDTLNEILAEQTGKTTKRIEKDTERDNFMSAREALEYGLID 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLTK 192
>gi|407472866|ref|YP_006787266.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
gi|407049374|gb|AFS77419.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
Length = 194
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++I + LVVA+L++L+ DP I +YINS G G
Sbjct: 19 DIYSRLLKDRIIFISDEINDVTASLVVAQLLFLESEDPDKDIQMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SITSGFAIYDTMQYIKPDVSTTCIGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I A+ + R+ L ++L++ TG E + K R M + AKE+G+ID
Sbjct: 130 RG--QAEDIKIHAERIIKTREQLNQILSERTGQPLERIEKDTDRDNFMSAEEAKEYGLID 187
Query: 292 KVLWRGQ 298
+V+ RG+
Sbjct: 188 EVIVRGK 194
>gi|407010349|gb|EKE25269.1| hypothetical protein ACD_5C00228G0012 [uncultured bacterium]
Length = 194
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 107/181 (59%), Gaps = 11/181 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V ++A+L++L+ +PK I +YINS G G
Sbjct: 22 DIYSRLLKDRIIFLGTPIDDGVANAIIAQLLFLEQQNPKEDITIYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S AIYDT+ ++ +V T+ VG A A L+L AG KGKRF++P+A++MI Q +
Sbjct: 73 VVSSALAIYDTMQYVRPDVRTICVGLAASGAALILGAGKKGKRFVLPNAEVMIHQVMGGA 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASDV I A+ + +D L ++LAKHTG V K R Y M + A +G++D
Sbjct: 133 SG--QASDVDIHARHILGTKDNLNRILAKHTGQKLAKVEKDTDRDYFMSADEAVAYGIVD 190
Query: 292 K 292
K
Sbjct: 191 K 191
>gi|428202443|ref|YP_007081032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427979875|gb|AFY77475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 204
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + LVVA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVTDESANLVVAQLLFLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AG KGKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L + LA HTG + + + R + M + AK +G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKNLLNEHLASHTGQPLDKIAEDTERDFFMSAEEAKTYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVINR 190
>gi|410659338|ref|YP_006911709.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|410662325|ref|YP_006914696.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
gi|409021693|gb|AFV03724.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|409024681|gb|AFV06711.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
Length = 209
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V +VVA+L++L+ DP+ +++YINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGAIDDNVANVVVAQLLFLEAEDPEKDVFIYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ +G A M LLAAGTKGKR +P+A+I+I QP +
Sbjct: 71 SITAGMAIYDTMQYIRPDVQTICIGMAASMGAFLLAAGTKGKRAALPNAEILIHQPLIAG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL A+++ I AK+ + ++ + ++LA+ TG + V + R Y+M + AKE+G++
Sbjct: 131 GGLSGQATEIEIHAKQLLKTKNKMNRILAERTGQPLDKVEQDTDRDYYMSAEEAKEYGIV 190
Query: 291 DKV 293
D+V
Sbjct: 191 DRV 193
>gi|390456222|ref|ZP_10241750.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
peoriae KCTC 3763]
Length = 198
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V ++A++++L DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ VG A M LL AG KGKRF +P+++IMI QP +
Sbjct: 70 SITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L ++LA TG E + K R Y M + AKE+G+ID
Sbjct: 130 QG--QATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIID 187
Query: 292 KVL 294
KVL
Sbjct: 188 KVL 190
>gi|310639654|ref|YP_003944412.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386038858|ref|YP_005957812.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309244604|gb|ADO54171.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343094896|emb|CCC83105.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 198
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V ++A++++L DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ VG A M LL AG KGKRF +P+++IMI QP +
Sbjct: 70 SITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L ++LA TG E + K R Y M + AKE+G+ID
Sbjct: 130 QG--QATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIID 187
Query: 292 KVL 294
KVL
Sbjct: 188 KVL 190
>gi|228474429|ref|ZP_04059164.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|314936932|ref|ZP_07844279.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|418619476|ref|ZP_13182304.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
gi|228271788|gb|EEK13135.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|313655551|gb|EFS19296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|374824522|gb|EHR88480.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
Length = 195
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAGTKGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++LA+ TG + E + K R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILAERTGQNIETIQKDTDRDNFLTADEAKEYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 HVM 190
>gi|167748739|ref|ZP_02420866.1| hypothetical protein ANACAC_03513 [Anaerostipes caccae DSM 14662]
gi|167651709|gb|EDR95838.1| endopeptidase Clp [Anaerostipes caccae DSM 14662]
Length = 202
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 112/189 (59%), Gaps = 10/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L+VA++++L+ DP I LYINS G G
Sbjct: 19 DIFSRLLSDRIIFLGEEVSDISASLIVAQMLFLEAQDPGRDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ ++C+V T+ VG A LLA GT+GKR +P+A+IMI QP +
Sbjct: 70 SVTAGFAIYDTMKYIQCDVATICVGLAASFGAFLLAGGTQGKRMALPNAEIMIHQPAIHG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+G+ PASD+ I + N+ L ++LA++TG S E + + R + M + A ++G+I
Sbjct: 130 NGIQGPASDIKIMSDYMQKNKQRLNRILAENTGRSIEEIERDTDRDHFMSAEEALKYGLI 189
Query: 291 DKVLWRGQE 299
D V+ + Q+
Sbjct: 190 DSVISKRQK 198
>gi|375306341|ref|ZP_09771639.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
gi|375081594|gb|EHS59804.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
Length = 198
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V ++A++++L DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ VG A M LL AG KGKRF +P+++IMI QP +
Sbjct: 70 SITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L ++LA TG E + K R Y M + AKE+G+ID
Sbjct: 130 QG--QATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIID 187
Query: 292 KVL 294
KVL
Sbjct: 188 KVL 190
>gi|238923369|ref|YP_002936885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|259585954|sp|C4ZGF4.1|CLPP_EUBR3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238875044|gb|ACR74751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|291525457|emb|CBK91044.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale DSM 17629]
gi|291528435|emb|CBK94021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale M104/1]
Length = 193
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
M + G AIYDT+ +KC+V T+ +G A M LLA G KGKR+ +P+A+IMI QP +
Sbjct: 70 MVTAGLAIYDTMQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + + L ++LA +TG E + R +M ++ A E+G+ID
Sbjct: 130 KG--QATEIQIAAENILKTKKRLNEILAANTGKPYETIAADTERDNYMSAQEAAEYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 SVI 190
>gi|406706127|ref|YP_006756480.1| ATP-dependent Clp protease proteolytic subunit ClpP [alpha
proteobacterium HIMB5]
gi|406651903|gb|AFS47303.1| ATP-dependent Clp protease proteolytic subunit ClpP [alpha
proteobacterium HIMB5]
Length = 203
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + V LV A+L++L+ DPK IYLYINS G G
Sbjct: 28 DIYSRLLKERIIFLTGQINDNVASLVTAQLLFLEAEDPKKEIYLYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G IYDT+ +K E+ T+ +G A M LLAAG+KGKRF +P++++M+ QP
Sbjct: 79 LVTAGLGIYDTMQYIKPEISTLCIGQAASMGSFLLAAGSKGKRFSLPNSRVMVHQPSAGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A E + + L ++ +KHTG S + + + R M + AK+FG+ID
Sbjct: 139 QG--QATDIEIHANEVLSLKKRLNEIYSKHTGKSVDEIKSALERDNFMTADAAKQFGLID 196
Query: 292 KVLWR 296
+V+ +
Sbjct: 197 EVVEK 201
>gi|340777394|ref|ZP_08697337.1| ATP-dependent Clp protease proteolytic subunit [Acetobacter aceti
NBRC 14818]
Length = 212
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V ++ A+L+YL+ ++P I YINS G G
Sbjct: 30 DIYSRLLQERIIFLTGPVYDQVASVISAQLLYLESVNPNKEISFYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ V TV +G A M LLLA G +GKRF +P+A++M+ QP +
Sbjct: 81 VVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGAEGKRFALPNARVMVHQPSGGA 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R L ++ +HTG + E + + + R +M + AK FG++D
Sbjct: 141 QG--QASDIEIQAREILTIRQRLNEIYREHTGQTLEDIEQKLERDSYMSADEAKAFGIVD 198
Query: 292 KVLWR 296
+V+ +
Sbjct: 199 EVIKK 203
>gi|381181306|ref|ZP_09890140.1| ATP-dependent Clp protease proteolytic subunit ClpP [Treponema
saccharophilum DSM 2985]
gi|380766526|gb|EIC00531.1| ATP-dependent Clp protease proteolytic subunit ClpP [Treponema
saccharophilum DSM 2985]
Length = 209
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 17/203 (8%)
Query: 92 PAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKA 151
P +ERS N R D+ S LL RI++I + +LVVA++++L+ +P+
Sbjct: 10 PFVIERSG--NGERS----YDIFSRLLKDRIIFIDGEINDLNADLVVAQILFLESENPEK 63
Query: 152 PIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTK 211
I +YINS G G + G AIYDT+ +KC++ T+ +G A M +LLA GTK
Sbjct: 64 DISIYINSPG---------GSVTAGLAIYDTMQYVKCDIQTICMGQAASMGAILLAGGTK 114
Query: 212 GKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTK 271
GKR+ +P +++MI QP G SD+ I+AKE + + +K LA+ TG EE V K
Sbjct: 115 GKRYALPSSRVMIHQPFGGVQG--QESDIAIQAKEILRLKSLSIKYLAEKTGKDEETVAK 172
Query: 272 TIRRPYHMDSRRAKEFGVIDKVL 294
+ R ++M ++ A ++G++D V+
Sbjct: 173 DMERDFYMSAQDALDYGIVDHVM 195
>gi|239624537|ref|ZP_04667568.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520923|gb|EEQ60789.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 196
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L+ A++++L+ D + I LYINS G G
Sbjct: 19 DIFSRLLSDRIIFLGEEVSDVSASLITAQMLFLEAQDLEKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ ++C+V T+ +G A LLA GTKGKR +P+A+IMI QP +
Sbjct: 70 SVTAGFAIYDTMQFIRCDVSTICIGLAASFGAFLLAGGTKGKRLALPNAEIMIHQPAIHG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SG+ ASD+ I + + +R L ++LA +TG S V R Y+M + A E+G+I
Sbjct: 130 SGIQGQASDIKIVSDHMLKSRQRLNRILADNTGKSIAQVAADTERDYYMSAGEAVEYGLI 189
Query: 291 DKVLWR 296
DK++ R
Sbjct: 190 DKIIDR 195
>gi|93007058|ref|YP_581495.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter
cryohalolentis K5]
gi|92394736|gb|ABE76011.1| ATP-dependent Clp protease proteolytic subunit ClpP [Psychrobacter
cryohalolentis K5]
Length = 231
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 125/227 (55%), Gaps = 19/227 (8%)
Query: 78 PYLDIYDSPTLMASPAQVERSASYNEHRP--------DTPPPDLPSLLLHGRIVYIGMPL 129
P+ D+ S A AQ +SA+ P D+ S LL R++++ +
Sbjct: 11 PHFDMLMSAHTTAQSAQYNQSATQAALVPMVVEQSARGERSFDIFSRLLRERVIFLTGQV 70
Query: 130 VPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCE 189
+ L+VA+L++L+ +P I+LYINS G G S G AI+DT+ +K E
Sbjct: 71 EDHMANLIVAQLLFLEAENPDKDIHLYINSPG---------GSVSAGLAIFDTMNFIKPE 121
Query: 190 VHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMV 249
V T+ +G A M LLAAG KGKR+ + +A++MI QP + G A+D+ I A+E +
Sbjct: 122 VSTICMGGAYSMGSFLLAAGEKGKRYALANARVMIHQPSGGAQG--QATDIEINAREILK 179
Query: 250 NRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
R L ++LA+ TG + + K + R Y +D++ AKE+G+ID+VL R
Sbjct: 180 TRARLNEILAERTGQPVDKIEKDVERDYWLDAKEAKEYGLIDEVLER 226
>gi|427728056|ref|YP_007074293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427363975|gb|AFY46696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 203
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + L+VA+L++L DP+ IYLYINS G G
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ Q++ +V T+ G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 69 SVTAGMGIFDTMKQIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L LA+HTG E + + R + M AKE+G+ID
Sbjct: 129 QG--QATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKEYGLID 186
Query: 292 KVLWR 296
+V+ R
Sbjct: 187 QVIDR 191
>gi|237751093|ref|ZP_04581573.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis
ATCC 43879]
gi|229373538|gb|EEO23929.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis
ATCC 43879]
Length = 196
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 116/189 (61%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + +V+ +VA+L++L+ DP+ ++LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEIDDSVSSSIVAQLLFLEAEDPQKDVFLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GF+IYDT+ +K ++ T+ VG A M LL+ GTKGKR+ +PHA+IMI QP +
Sbjct: 70 SVTSGFSIYDTMNYIKPDICTICVGQAASMGAFLLSCGTKGKRYALPHARIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + + +LA +TG S + +T+ R ++M + A+++G+ID
Sbjct: 130 RG--QATDIEIQAKEILRLKTIINDILAANTGQSVKKITQDCERDFYMSADEAQKYGLID 187
Query: 292 KVLWRGQET 300
V+ R ++
Sbjct: 188 SVMTRSSKS 196
>gi|400288463|ref|ZP_10790495.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter sp.
PAMC 21119]
Length = 215
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ + + L+VA+L++L+ +P I+LYINS G G
Sbjct: 37 DIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAENPDKDIHLYINSPG---------G 87
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ +K EV T+ +G A M LLAAG KGKR+ + +A++MI QP +
Sbjct: 88 SVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYALANARVMIHQPSGGA 147
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L K+LA+ TG E + K + R Y +D+ AKE+G++D
Sbjct: 148 QG--QATDIEINAREILKTRARLNKILAERTGQPVEKIEKDVERDYWLDAEEAKEYGLVD 205
Query: 292 KVLWR 296
VL R
Sbjct: 206 AVLER 210
>gi|420157089|ref|ZP_14663929.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sp. MSTE9]
gi|394757099|gb|EJF40158.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sp. MSTE9]
Length = 193
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RIV + + LVVA+L+YL+ DP I LYINS G G
Sbjct: 19 DIFSRLLNDRIVMLNEEVNNVTASLVVAQLLYLEGQDPSKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 SVTAGLAIYDTMQYIKCDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D++I A + + L ++LA+ TG E + K R M + +A +G++D
Sbjct: 130 QG--QATDIMIHADHIIATKKKLNEILAEKTGQPIEVIMKDTERDNFMTAEQAAAYGLVD 187
Query: 292 KVLWR 296
KV+ +
Sbjct: 188 KVIAK 192
>gi|255284021|ref|ZP_05348576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bryantella
formatexigens DSM 14469]
gi|255265474|gb|EET58679.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Marvinbryantia formatexigens DSM 14469]
Length = 194
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L+VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSANLIVAQLLFLESEDPAKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G+AIYDT+ +KC+V T+ +G A M LLA G KGKRF +P+A+IMI QP +
Sbjct: 70 SVSAGWAIYDTMQYIKCDVSTICMGMAASMGAFLLAGGAKGKRFALPNAQIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + +R L + LA +TG + + R +M + AK +G+ID
Sbjct: 130 KG--QASDIKIVAEEILKSRKRLNEYLAANTGQPIDVIEADTERDNYMTAEEAKAYGLID 187
Query: 292 KVLWRGQ 298
V+ Q
Sbjct: 188 AVIANRQ 194
>gi|350270328|ref|YP_004881636.1| ATP-dependent Clp protease proteolytic subunit [Oscillibacter
valericigenes Sjm18-20]
gi|348595170|dbj|BAK99130.1| ATP-dependent Clp protease proteolytic subunit [Oscillibacter
valericigenes Sjm18-20]
Length = 193
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RIV++G + LVVA+L+YL+ DP I LYINS G G
Sbjct: 19 DIFSRLLNDRIVFLGEEVNATTASLVVAQLLYLEAQDPDKEIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
++G AIYDT+ +KC+V TV VG M LL++G KGKR +P+A+IMI QP +
Sbjct: 70 SVTDGMAIYDTMQYVKCDVSTVCVGMCASMGAFLLSSGAKGKRIALPNAEIMIHQPSAGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G + +D+ I K + + + ++A +TG S E +T R M + AK+FG+ID
Sbjct: 130 QGQI--TDMAIHLKRLEIIKKRMNHIMAGNTGRSVEEITAACERDNFMSAEEAKDFGLID 187
Query: 292 KVL 294
K++
Sbjct: 188 KII 190
>gi|302390303|ref|YP_003826124.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200931|gb|ADL08501.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 200
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG P+ ++ LV+A+L++L+ DP IYLYINS G G
Sbjct: 19 DIYSRLLKDRIVFIGTPIDDSIASLVIAQLLFLESEDPDKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M +LLA G GKR +P+++IMI QP
Sbjct: 70 SVTAGLAIYDTMQYIKPDVSTICIGMAASMGAVLLAGGAPGKRLALPNSRIMIHQPWGGV 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ AKE + R+ L ++L KHT E + + R Y M + AK++G+ID
Sbjct: 130 QG--RALDIETHAKEILRLREVLNEILVKHTKQPLERIERDTERDYFMSAVEAKQYGLID 187
Query: 292 KVLWR 296
+V+++
Sbjct: 188 EVIYK 192
>gi|225874969|ref|YP_002756428.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidobacterium capsulatum ATCC 51196]
gi|254763781|sp|C1F6W4.1|CLPP_ACIC5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|225792091|gb|ACO32181.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidobacterium capsulatum ATCC 51196]
Length = 196
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 12/186 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL I+++G P+ + LV+A+L++L DP I LYINS G G
Sbjct: 19 DIYSRLLRDNIIFLGTPIDDQIANLVIAQLLFLSAEDPDKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T +G A M LL +GT GKRF +P+++I+I QP +
Sbjct: 70 SITAGLAIYDTMQFIKNDVVTYCIGQAASMGAFLLMSGTAGKRFALPNSRILIHQPSMGG 129
Query: 232 -SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SG A+D+ I A+E + R+ L++KHTG S E + + + R + M++ +AKE+G+I
Sbjct: 130 LSG--QATDIDIHAREILRIREITNNLMSKHTGQSLERIERDVERDFIMNAPQAKEYGII 187
Query: 291 DKVLWR 296
D+++ R
Sbjct: 188 DEIIDR 193
>gi|374321531|ref|YP_005074660.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
gi|357200540|gb|AET58437.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
Length = 198
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V ++A++++L DP+ I+LY+NS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYVNSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ VG A M LL AG KGKRF +P+++IMI QP +
Sbjct: 70 SITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L ++LA TG E + K R Y M + AKE+G+ID
Sbjct: 130 QG--QATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIID 187
Query: 292 KVL 294
KVL
Sbjct: 188 KVL 190
>gi|320106219|ref|YP_004181809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Terriglobus
saanensis SP1PR4]
gi|319924740|gb|ADV81815.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Terriglobus
saanensis SP1PR4]
Length = 198
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL I+++G P+ + +++A+L++L DP+ I LYINS G G
Sbjct: 19 DIYSRLLRDNIIFLGTPIDDNIANVIIAQLLFLSGEDPEKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LL AG KGKRF +P+++I+I QP +
Sbjct: 70 SITAGMAIYDTMQYIKNDVSTLCIGQAASMGAFLLMAGKKGKRFALPNSRILIHQPLIMG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ A+++ I A+E + R+ + K+ A+HTG + E + + R + M+S +AKE+G+I
Sbjct: 130 GGISGQATEIDIHAREILRIRELMNKIQAEHTGQTLEQIERDTDRDFIMNSAQAKEYGLI 189
Query: 291 DKVLWR 296
D ++ R
Sbjct: 190 DDIITR 195
>gi|118579613|ref|YP_900863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
gi|166201831|sp|A1AN85.1|CLPP_PELPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118502323|gb|ABK98805.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
Length = 199
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L++A+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKERIIFLGGGIDDQVANLIIAQLLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ VG A M +LLAAG KGKRF + H++IMI QP
Sbjct: 69 VVTSGMAIYDTMRYIKAPVSTICVGQAASMGAVLLAAGEKGKRFSLNHSRIMIHQPLGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + ++ L +LA TG S+E + R Y M + A+E+G+ID
Sbjct: 129 QG--QATDISIHAKEILRMKEELNSILADLTGQSKERIEADTDRDYFMSATEAEEYGLID 186
Query: 292 KVLWR 296
R
Sbjct: 187 ATFTR 191
>gi|148241694|ref|YP_001226851.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RCC307]
gi|147850004|emb|CAK27498.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 200
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 103/174 (59%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + V +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGGEVNDGVANALVAQMLYLDSDDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTIQYIKSDVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP-LGGTAQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + +D L K LA +G + E +TK R Y + + AK +G+ID+V+
Sbjct: 141 EIEAREILRMKDQLNKQLADMSGQTIEKITKDTDRDYFLSADDAKAYGLIDRVI 194
>gi|404496730|ref|YP_006720836.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
metallireducens GS-15]
gi|418065321|ref|ZP_12702695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
gi|90101408|sp|Q39UH2.1|CLPP_GEOMG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78194335|gb|ABB32102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens GS-15]
gi|373562499|gb|EHP88710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
Length = 199
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V LV+A+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ VG A M LLL+ G KGKRF + H++IMI QP
Sbjct: 69 VVTAGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLTHSRIMIHQPLGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + + L +++A+++G + E V R Y M AK +G+ID
Sbjct: 129 QG--QATDIHIHAQEILKMKKRLNEIIAENSGQALEKVEADTERDYFMSGEEAKSYGIID 186
Query: 292 KVLWR 296
++ R
Sbjct: 187 AIIAR 191
>gi|386813684|ref|ZP_10100908.1| ATP-dependent Clp protease proteolytic subunit ClpP [planctomycete
KSU-1]
gi|386403181|dbj|GAB63789.1| ATP-dependent Clp protease proteolytic subunit ClpP [planctomycete
KSU-1]
Length = 222
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG + ++ LV+A++++LQ + I +YINS G G
Sbjct: 43 DIFSRLLKDRIIFIGSAIEDTLSNLVIAQILFLQNENKNQDINIYINSPG---------G 93
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++C+V T +G A MA +LLAAGTKGKR+ +PH +IM+ QP
Sbjct: 94 SITAGLAIYDTMQFVQCDVATFCIGQAFSMAAILLAAGTKGKRYGLPHTRIMLHQPWGGM 153
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + + L ++L KH G E V + R ++M S AK +G+ID
Sbjct: 154 RG--TATDISIQAEEILRMKKYLNEILVKHAGQPIERVEADVDRDFYMSSHEAKAYGLID 211
Query: 292 KVL 294
+V+
Sbjct: 212 EVI 214
>gi|290969192|ref|ZP_06560717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
gi|335049502|ref|ZP_08542492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 199-6]
gi|290780698|gb|EFD93301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
gi|333762762|gb|EGL40247.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 199-6]
Length = 200
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 119/214 (55%), Gaps = 23/214 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
P ++ +Q ERS DL S L+ RI+++ + + ++A+L++L+
Sbjct: 6 PVVVEQTSQGERSY------------DLYSRLMKDRIIFLSGQVEDTMANSLIAQLLFLE 53
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP IYLYINS G G+ + G AIYDT+ +K +V T+ VG+A MA +L
Sbjct: 54 AEDPDKDIYLYINSPG---------GVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVL 104
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LAAGTKGKRF +PH+++MI QP G A+D+ I +E + R L +LA HTG
Sbjct: 105 LAAGTKGKRFALPHSQVMIHQPLGGVQG--QATDIEIHTREILRVRRELNGILAAHTGQP 162
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
+ + K R + + AK +G+ID++L R Q+
Sbjct: 163 LDVIEKDTERDNFLTAEDAKHYGLIDEILVRPQQ 196
>gi|402574685|ref|YP_006624028.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus meridiei DSM 13257]
gi|402255882|gb|AFQ46157.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus meridiei DSM 13257]
Length = 203
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LVVA++++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGGIDDDVANLVVAQMLFLEAEDPEKDINLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ +G A M LLA+GTKGKR +P+++++I QP +
Sbjct: 71 SITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLASGTKGKRVALPNSEVLIHQPLIGG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL A+++ I AK+ + + + K+LA+ TG E V K R Y+M + AKE+G++
Sbjct: 131 HGLSGQATEIEIHAKQLLRTKAKMNKILAERTGQPIEKVEKDTERDYYMTAEEAKEYGLV 190
Query: 291 DKVLWR 296
D+VL +
Sbjct: 191 DQVLEK 196
>gi|332708809|ref|ZP_08428780.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332352351|gb|EGJ31920.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 230
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V + +VA+L+YL+ D + I LYINS G G
Sbjct: 44 DIYSRLLRERIVFLGTQVDDVVADSIVAQLLYLEAEDEEKDIQLYINSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++ +V T+ G A M LLA G GKR +P+++IMI QP +
Sbjct: 95 SVTAGMAIYDTMQQVRPDVVTICYGLAASMGAFLLAGGAAGKRMALPNSRIMIHQPLGGA 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + ++ TL +LLA HTG E + + R + M + AK++G+ID
Sbjct: 155 QG--QAVDIEIQAREILYHKQTLNQLLANHTGQPVEQIAEDTERDFFMSAAEAKDYGLID 212
Query: 292 KVLWR 296
+V+ R
Sbjct: 213 QVISR 217
>gi|374583503|ref|ZP_09656597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
gi|374419585|gb|EHQ92020.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
Length = 205
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L+VA++++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGAIDADVANLIVAQMLFLEAEDPEKDINLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ +G A M LLA+GTKGKR +P+++++I QP +
Sbjct: 71 SITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLASGTKGKRVALPNSEVLIHQPLIGG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL A+++ I AK+ + + + K+LA+ TG E V K R Y+M + AKE+G++
Sbjct: 131 GGLSGQATEIEIHAKQLLRTKAKMNKILAERTGQPIEKVEKDTDRDYYMTAEEAKEYGLV 190
Query: 291 DKVLWR 296
D+VL +
Sbjct: 191 DQVLEK 196
>gi|218961379|ref|YP_001741154.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans]
gi|167730036|emb|CAO80948.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 194
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + VVA+L++L+ DP+ IY+YINS G G
Sbjct: 19 DIYSRLLKDRIVFVGGVIEDNLANTVVAQLLHLEGEDPERDIYMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ +K V T+ +G A MA +LLAAG GKR +P+++IMI QP +
Sbjct: 70 IISAGLAIYDTMQYIKPRVSTICIGQAASMAAVLLAAGAPGKRSALPNSRIMIHQPMGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R + ++L KH+G S E + + R Y M + A E+G+ID
Sbjct: 130 QG--QATDIEIQAKEILYLRGRMNEILHKHSGQSIEKIMEDTERNYFMSAEEAMEYGIID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|223996651|ref|XP_002287999.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
gi|220977115|gb|EED95442.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
Length = 191
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + ++ LV A+L++L+ P+ P+Y+YINS G G
Sbjct: 17 DIYSRLLRERIICVHGEVTDSMASLVTAQLLFLEAEAPEKPVYMYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G A+YDT+ + EVHT+ +G A M LLLA G+ G RF +P+A+IM+ QP +
Sbjct: 68 LVTAGMAMYDTMQYIHPEVHTICMGQAASMGSLLLAGGSAGCRFALPNARIMLHQPSGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G+ ASD+ I+A+E + R L +L HTG E + + + R MD R+A +FGVID
Sbjct: 128 QGM--ASDIDIQAREILRTRANLNQLYVHHTGRELEEIERVMDRDTFMDVRQAVDFGVID 185
Query: 292 KVLWR 296
+VL +
Sbjct: 186 EVLTK 190
>gi|358062799|ref|ZP_09149437.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
hathewayi WAL-18680]
gi|356698982|gb|EHI60504.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
hathewayi WAL-18680]
Length = 193
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSASLVVAQLLFLESEDPSKDINLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +KC+V TV +G A M LLA GTKGKRF +P+A IMI QP +
Sbjct: 70 SVSAGLAIYDTMNYIKCDVSTVCMGMAASMGAFLLAGGTKGKRFALPNADIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A++ + + L ++LA +TG E + + R +M + AK +G+ID
Sbjct: 130 QG--QATEIQIVAEKILATKKKLNEILAANTGQPIEVIERDTDRDNYMTAEEAKAYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 AVI 190
>gi|404406206|ref|ZP_10997790.1| ATP-dependent Clp protease proteolytic subunit [Alistipes sp.
JC136]
Length = 222
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 122/232 (52%), Gaps = 17/232 (7%)
Query: 65 EAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVY 124
E + +L D + SP +E E + + D+ S L+ RI++
Sbjct: 5 EKYARNHCGISSLKLHDFQSISSAYVSPTIIE------ERQLNIATMDVFSRLMMDRIIF 58
Query: 125 IGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLM 184
+G P+ ++ A+L++L+ +DP+ I +YINS G G S G IYDT+
Sbjct: 59 LGAPIYDDAANIIQAQLLFLESVDPEKDIQIYINSPG---------GSVSAGLGIYDTMQ 109
Query: 185 QMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRA 244
+ +V T+ G A M +LL AG KGKR +PH+++MI QP + G ASD+ I A
Sbjct: 110 LVNSDVATICTGLAASMGAVLLTAGAKGKRSALPHSRVMIHQPLGGAQG--QASDIEITA 167
Query: 245 KEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
+E M + L ++LA H+G S + + K R Y + +R AKE+G+ID+VL +
Sbjct: 168 REIMKTKRELYEILAAHSGVSVKKIEKDADRDYWLSAREAKEYGLIDEVLSK 219
>gi|352517153|ref|YP_004886470.1| ATP-dependent Clp protease proteolytic subunit [Tetragenococcus
halophilus NBRC 12172]
gi|348601260|dbj|BAK94306.1| ATP-dependent Clp protease proteolytic subunit [Tetragenococcus
halophilus NBRC 12172]
Length = 193
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ AQ ER+ D+ S LL RI+ + + ++ ++++L++L
Sbjct: 5 PTVIEQSAQGERA------------YDIYSRLLKDRIIMLSGEVTDDLSNSIISQLLFLD 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
D + IYLYINS G G + GFAIYDT+ +K +V T+ +G A M L
Sbjct: 53 AQDSEKDIYLYINSPG---------GSVTAGFAIYDTINFVKADVQTIVLGMAASMGSFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L AGTKGKRF +P+A+I+I QP + G A+++ I A+ + RD L ++LA+ TG S
Sbjct: 104 LTAGTKGKRFALPNAEILIHQPLGGAQG--QATEIEIAARHILKTRDRLNEILAERTGQS 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E + + R +M + AKE+G+ID ++
Sbjct: 162 LEVIKRDTDRDNYMTAEEAKEYGLIDDIM 190
>gi|313891581|ref|ZP_07825191.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
gi|313120040|gb|EFR43222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
Length = 199
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + +++A+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAEDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ +V T+ +G+ MA +LL +G KGKRF +PH+ +MI QP
Sbjct: 70 VVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTSGAKGKRFALPHSNVMIHQPLGGV 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+E + RD L +LAKHTG S + + K R M + A ++G+ID
Sbjct: 130 QG--QATEIEIHAREILRLRDELNGILAKHTGQSLDVIKKDTERDNFMTAENALKYGLID 187
Query: 292 KVLWRGQET 300
K+L R + T
Sbjct: 188 KILTRNELT 196
>gi|291518668|emb|CBK73889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
fibrisolvens 16/4]
Length = 194
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + L VA+L++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFLGEEVNETTASLTVAQLLFLESEDPSKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ +G A M LLA G KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGMAIYDTMQYIKCDVSTICIGMAASMGAFLLAGGQKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + R+ L ++LA +TG E V R + +D++ A ++G+ID
Sbjct: 130 KG--QATEIEIAAKNILKTREKLNRMLAANTGKDYEQVCLDTERDHWLDAQEALDYGLID 187
Query: 292 KVLWR 296
+++ +
Sbjct: 188 EIITK 192
>gi|406836611|ref|ZP_11096205.1| ATP-dependent Clp protease proteolytic subunit ClpP [Schlesneria
paludicola DSM 18645]
Length = 208
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 11/182 (6%)
Query: 113 LPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGM 172
+ LLL RIV++ P+ A L+V +L+YLQ + ++ YINS G G
Sbjct: 27 IGDLLLENRIVFLDGPIHDASANLIVMKLLYLQSENKHQDVHFYINSPG---------GS 77
Query: 173 ESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSS 232
+ AIYDT+ ++C V T VG A +L+A GTKGKRF++PHAK+MI QP S
Sbjct: 78 VTATMAIYDTMQFLQCSVATYCVGLAASGGAILVAGGTKGKRFILPHAKMMIHQPYGEVS 137
Query: 233 GLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDK 292
G SD+ I+A+E +V R L ++LA HTG E + K R ++ + AKE+G+ID+
Sbjct: 138 G--QVSDIEIQAEEILVTRHVLNEILASHTGQPVERIAKDTGRDRYLTATAAKEYGLIDE 195
Query: 293 VL 294
+L
Sbjct: 196 IL 197
>gi|170078453|ref|YP_001735091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
gi|169886122|gb|ACA99835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
Length = 198
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 23/211 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ S + ER+ D+ S LL RIV++G + + L+VA+L++L+
Sbjct: 3 PTVIESSGRGERAF------------DIYSRLLRERIVFLGTQVNDEIANLIVAQLLFLE 50
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP+ IYLYINS G G S G I+DT+ Q++ +V T+ +G A M L
Sbjct: 51 ADDPEKDIYLYINSPG---------GSVSAGMGIFDTMNQVRPDVCTICIGLAASMGAFL 101
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L+AG KGKR +P+++IMI QP + G A+D+ I+AKE + + L + LA HTG
Sbjct: 102 LSAGAKGKRMSLPNSRIMIHQPLGGAQG--QATDIEIQAKEILYLKGKLNQHLADHTGQP 159
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
E + R + M + AK++G+ID+V+ R
Sbjct: 160 LEKIEIDTDRDFFMSAAEAKDYGLIDQVIER 190
>gi|116243153|sp|Q1Q8J2.2|CLPP_PSYCK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 215
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ + + L+VA+L++L+ +P I+LYINS G G
Sbjct: 37 DIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAENPDKDIHLYINSPG---------G 87
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ +K EV T+ +G A M LLAAG KGKR+ + +A++MI QP +
Sbjct: 88 SVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYALANARVMIHQPSGGA 147
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L ++LA+ TG + + K + R Y +D++ AKE+G+ID
Sbjct: 148 QG--QATDIEINAREILKTRARLNEILAERTGQPVDKIEKDVERDYWLDAKEAKEYGLID 205
Query: 292 KVLWR 296
+VL R
Sbjct: 206 EVLER 210
>gi|419718353|ref|ZP_14245675.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnoanaerobaculum saburreum F0468]
gi|383305484|gb|EIC96847.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnoanaerobaculum saburreum F0468]
Length = 193
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ S ++ ER+ D+ S LL RI+++G + LVVA++++L+
Sbjct: 5 PTVIESTSRGERAF------------DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP I LYINS G G G AIYDT+ +KC+V T+ +G A MA L
Sbjct: 53 SEDPTKDINLYINSPG---------GSVVAGMAIYDTMQYVKCDVSTICMGMAASMAAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA GTKGKR+ +P+A+IMI QP + G A+++ I A++ + R+ + K+LA++T
Sbjct: 104 LAGGTKGKRYALPNAEIMIHQPSGGAQG--QATEIRIAAEQILKTREKMNKILAENTNQP 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E + + R +M ++ A +G+IDKV+
Sbjct: 162 IEVIERDTERDNYMSAKEALSYGIIDKVI 190
>gi|298243373|ref|ZP_06967180.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
gi|297556427|gb|EFH90291.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
Length = 279
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 119/202 (58%), Gaps = 10/202 (4%)
Query: 95 VERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIY 154
+E ASY R ++PS LL RIV++ + + ++ L+YL+ D I
Sbjct: 83 IENMASYR--RESARINEVPSRLLKERIVFVPPFINDEIANYLIGVLLYLESDDASKEIS 140
Query: 155 LYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKR 214
LYIN G+ DG G IYDT+ +K E+ TV +GAA G+A +LLAAGTKGKR
Sbjct: 141 LYINCHGSL--DGNLY----YGLGIYDTMRYLKPEITTVCLGAAQGVAAVLLAAGTKGKR 194
Query: 215 FMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIR 274
F++PH+++++ QP G ASD+ IRA E + R +L ++LA+HTG S + V +
Sbjct: 195 FILPHSQVVLHQPLSSVKG--QASDIEIRAHELLRQRQSLYEILAEHTGKSVDQVMQDAD 252
Query: 275 RPYHMDSRRAKEFGVIDKVLWR 296
R +M ++ A E+G++D+V+ R
Sbjct: 253 RRRYMTAKEAVEYGLVDEVITR 274
>gi|291569895|dbj|BAI92167.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 236
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+++G P+ V V A++++L+ DP+ I LYINS G G
Sbjct: 50 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPG---------G 100
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ Q++ +V T+ G A M LLA+GT GKR +P ++IMI QP +
Sbjct: 101 SVTAGMGIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGA 160
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ TL LLA+HTG E + R + M + A+E+G+ID
Sbjct: 161 QG--QAIDIEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLID 218
Query: 292 KVLWR 296
+V+ +
Sbjct: 219 QVILK 223
>gi|260436469|ref|ZP_05790439.1| Clp protease [Synechococcus sp. WH 8109]
gi|260414343|gb|EEX07639.1| Clp protease [Synechococcus sp. WH 8109]
Length = 200
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K EV T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP-LGGTSRRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + ++ L + LA +G S E + K R Y + + AKE+G+ID+V+
Sbjct: 141 EIEAREILRMKEMLNRSLADMSGQSFEKIEKDTDRDYFLSAEEAKEYGLIDRVI 194
>gi|434398580|ref|YP_007132584.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428269677|gb|AFZ35618.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 200
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 23/211 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ S + ER+ D+ S LL RIV++G + + L+VA+L++L+
Sbjct: 3 PTVIESSGRGERAF------------DIYSRLLRERIVFLGQQVDDDIANLIVAQLLFLE 50
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP+ IYLYINS G G S G ++DT+ Q++ +V T+ +G A M L
Sbjct: 51 AEDPEKDIYLYINSPG---------GSVSAGMGMFDTMNQIRPDVCTICIGLAASMGAFL 101
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L+AG KGKR +P+++IMI QP + G A+D+ I+AKE + + L + LA HTG
Sbjct: 102 LSAGAKGKRMSLPNSRIMIHQPLGGAQG--QATDIEIQAKEILYLKQKLNQHLADHTGQP 159
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
+ + R + M + +KE+G+ID+V+ R
Sbjct: 160 LSKIEEDTERDFFMSAEESKEYGLIDQVINR 190
>gi|119898362|ref|YP_933575.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. BH72]
gi|166201798|sp|A1K783.1|CLPP_AZOSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119670775|emb|CAL94688.1| Endopeptidase Clp [Azoarcus sp. BH72]
Length = 212
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 73 NSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPA 132
N+GT + +D L P VE+S D+ S LL R+V++ P+
Sbjct: 2 NAGTPQHSSAWDPVGLGLIPMVVEQSGRGERSY------DIYSRLLKERVVFLVGPVNDV 55
Query: 133 VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHT 192
L+VA+L++L+ +P IY YINS G G + G AIYDT+ +K V T
Sbjct: 56 TANLIVAQLLFLESENPDKDIYFYINSPG---------GSVTAGLAIYDTMQFIKPNVST 106
Query: 193 VAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRD 252
+ +G A M LLAAG KGKRF +P++++MI QP G ASD+ I A+E + R+
Sbjct: 107 LCIGQAASMGAFLLAAGEKGKRFCLPNSRVMIHQPLGGFQG--QASDIEIHAREILYLRE 164
Query: 253 TLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
L +LAKHTG + E + K R M + A E+G++DKVL
Sbjct: 165 RLNGMLAKHTGQTIEQIEKDTDRDNFMSATAAVEYGLVDKVL 206
>gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|417905699|ref|ZP_12549498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|341598593|gb|EGS41093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
Length = 195
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++LA+ TG S E + + R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31.1|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LV+A++++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ ++ +V T+ VG A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 71 SISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGT 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I AK + RD L ++L++ TG E + + R + M +R A+E+G+ID
Sbjct: 131 QG--QAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYGLID 188
Query: 292 KVLWR 296
+V+ +
Sbjct: 189 EVITK 193
>gi|383790357|ref|YP_005474931.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Spirochaeta
africana DSM 8902]
gi|383106891|gb|AFG37224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Spirochaeta
africana DSM 8902]
Length = 205
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ + +LVVA+L++L+ DP I LYINS G G
Sbjct: 24 DIYSRLLKDRIVFLDGEIHDVTADLVVAQLLFLESQDPDKDISLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M +LLAAGT GKRF +P +++++ QP +
Sbjct: 75 SVTAGLAIYDTIQYIKPDVQTICMGQAASMGAVLLAAGTAGKRFALPSSRVLMHQPWGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L+ A HTG+S E + + R + M ++ +KE+G++D
Sbjct: 135 RG--QASDIGIQAREIIRLKRLLIDYFANHTGHSFEKIESDMERDFFMSAQESKEYGIVD 192
Query: 292 KVLWR 296
++L R
Sbjct: 193 QILIR 197
>gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438001582|ref|YP_007271325.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178376|emb|CCP25349.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 194
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG + V L +A+++YL+ DP I LYINS G G
Sbjct: 19 DIYSRLLKERIIFIGTSIDDTVASLAIAQMLYLESEDPDKDIRLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M +LLAAGT+GKR+ +P+++IMI QP
Sbjct: 70 SVTAGLAIYDTMQYIKPDVSTICMGLAASMGAVLLAAGTEGKRYALPNSRIMIHQPWGGV 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ AKE + R+ L ++LA HT S E + K R Y M S+ A E+G+ID
Sbjct: 130 QG--KAVDIETHAKEILRLRELLNEILANHTKQSIEKIEKDTDRDYFMSSKEALEYGLID 187
Query: 292 KVLWR 296
+V+ +
Sbjct: 188 EVIHK 192
>gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus N315]
gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MW2]
gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus COL]
gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH9]
gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH1]
gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781]
gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719]
gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117]
gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765]
gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102]
gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus 132]
gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754]
gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819]
gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MR1]
gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796]
gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379014058|ref|YP_005290294.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|379020540|ref|YP_005297202.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|379795239|ref|YP_005325237.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|384547051|ref|YP_005736304.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|384549630|ref|YP_005738882.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384861436|ref|YP_005744156.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384864093|ref|YP_005749452.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384868298|ref|YP_005748494.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869354|ref|YP_005752068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|385781094|ref|YP_005757265.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|386728536|ref|YP_006194919.1| ATP-dependent endopeptidase clp proteolytic subunit [Staphylococcus
aureus subsp. aureus 71193]
gi|386830410|ref|YP_006237064.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|387142462|ref|YP_005730855.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|387149931|ref|YP_005741495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|387602124|ref|YP_005733645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|387779903|ref|YP_005754701.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus LGA251]
gi|404478169|ref|YP_006709599.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 08BA02176]
gi|415683595|ref|ZP_11448811.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|415689458|ref|ZP_11452760.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693848|ref|ZP_11455519.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|416842650|ref|ZP_11905104.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|416847874|ref|ZP_11907423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|417650451|ref|ZP_12300222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|417652532|ref|ZP_12302279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|417655183|ref|ZP_12304897.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|417796631|ref|ZP_12443837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|417798637|ref|ZP_12445797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|417802514|ref|ZP_12449572.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|417887242|ref|ZP_12531375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|417890528|ref|ZP_12534601.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|417892365|ref|ZP_12536415.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|417896583|ref|ZP_12540529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|417898150|ref|ZP_12542074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|417902321|ref|ZP_12546188.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|417904583|ref|ZP_12548405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|418280847|ref|ZP_12893672.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|418283166|ref|ZP_12895922.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|418284347|ref|ZP_12897073.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|418308841|ref|ZP_12920432.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|418309577|ref|ZP_12921131.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|418313751|ref|ZP_12925236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|418315200|ref|ZP_12926664.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|418318354|ref|ZP_12929759.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|418322160|ref|ZP_12933497.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|418423914|ref|ZP_12997054.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426888|ref|ZP_12999909.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429820|ref|ZP_13002744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432714|ref|ZP_13005507.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436430|ref|ZP_13008239.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439328|ref|ZP_13011043.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442304|ref|ZP_13013916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445435|ref|ZP_13016920.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448373|ref|ZP_13019772.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|418451192|ref|ZP_13022531.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|418454216|ref|ZP_13025483.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418457120|ref|ZP_13028329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561062|ref|ZP_13125562.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|418561317|ref|ZP_13125809.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|418565775|ref|ZP_13130170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|418566869|ref|ZP_13131236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|418570534|ref|ZP_13134800.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|418574077|ref|ZP_13138254.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|418578667|ref|ZP_13142762.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418581482|ref|ZP_13145563.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418595736|ref|ZP_13159333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|418598777|ref|ZP_13162284.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|418601712|ref|ZP_13165128.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|418639487|ref|ZP_13201734.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|418640943|ref|ZP_13203159.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|418644345|ref|ZP_13206491.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|418647139|ref|ZP_13209218.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|418650986|ref|ZP_13212997.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|418654288|ref|ZP_13216201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|418656309|ref|ZP_13218123.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|418657987|ref|ZP_13219735.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|418660942|ref|ZP_13222548.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|418872430|ref|ZP_13426769.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|418874789|ref|ZP_13429055.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877613|ref|ZP_13431852.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880473|ref|ZP_13434693.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883398|ref|ZP_13437597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886060|ref|ZP_13440210.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418888666|ref|ZP_13442802.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|418891410|ref|ZP_13445527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418894225|ref|ZP_13448326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418897185|ref|ZP_13451258.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900155|ref|ZP_13454214.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418903043|ref|ZP_13457084.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418904859|ref|ZP_13458888.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418908561|ref|ZP_13462569.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|418913957|ref|ZP_13467929.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418916633|ref|ZP_13470594.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418919641|ref|ZP_13473584.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418922437|ref|ZP_13476354.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418925006|ref|ZP_13478909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928091|ref|ZP_13481977.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418930802|ref|ZP_13484650.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418933703|ref|ZP_13487527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418948897|ref|ZP_13501177.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|418949913|ref|ZP_13502132.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|418952635|ref|ZP_13504651.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|418979235|ref|ZP_13527032.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|418981671|ref|ZP_13529386.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985309|ref|ZP_13532998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|418987671|ref|ZP_13535344.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|418990658|ref|ZP_13538319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|418993481|ref|ZP_13541118.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|419775511|ref|ZP_14301450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|419785631|ref|ZP_14311382.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|421149542|ref|ZP_15609200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|422744913|ref|ZP_16798868.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422746628|ref|ZP_16800559.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424770820|ref|ZP_18198002.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|424784626|ref|ZP_18211436.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|440708128|ref|ZP_20888804.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|440734249|ref|ZP_20913861.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637771|ref|ZP_21121839.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443640354|ref|ZP_21124345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|448741163|ref|ZP_21723134.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|448745335|ref|ZP_21727190.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
gi|54036854|sp|P63786.1|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54036862|sp|P99089.1|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54040892|sp|P63785.1|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748671|sp|Q6GB62.1|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748685|sp|Q6GIM3.1|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460165|sp|Q5HHQ0.1|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183185|sp|Q2YSF8.1|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243169|sp|Q2G036.1|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124013828|sp|Q2FIM5.1|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214713|sp|A7WZR9.1|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172048797|sp|A6QF76.1|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082468|sp|A6TZP7.1|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082469|sp|A5IQX2.1|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082470|sp|A8Z045.1|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315]
gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu50]
gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2]
gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus COL]
gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus subsp. aureus JH9]
gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH1]
gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu3]
gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781]
gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719]
gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102]
gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765]
gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117]
gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754]
gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819]
gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796]
gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|334268522|gb|EGL86960.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|334274514|gb|EGL92832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|334275498|gb|EGL93787.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|341840549|gb|EGS82052.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|341843411|gb|EGS84638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|341846489|gb|EGS87681.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|341849148|gb|EGS90299.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|341854663|gb|EGS95529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|341857827|gb|EGS98637.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|341858295|gb|EGS99092.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|344177005|emb|CCC87469.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus LGA251]
gi|356872229|emb|CCE58568.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSHR1132]
gi|359829849|gb|AEV77827.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|364522083|gb|AEW64833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|365167418|gb|EHM58883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|365168239|gb|EHM59592.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|365173650|gb|EHM64138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|365223769|gb|EHM65044.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|365235450|gb|EHM76369.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|365236874|gb|EHM77752.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|365238910|gb|EHM79738.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|365243223|gb|EHM83909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|365243830|gb|EHM84498.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|371970171|gb|EHO87601.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|371972686|gb|EHO90060.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|371977662|gb|EHO94925.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|371980174|gb|EHO97388.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|371983433|gb|EHP00577.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|371983904|gb|EHP01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|374362755|gb|AEZ36860.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|374397523|gb|EHQ68732.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|374398927|gb|EHQ70079.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|374400646|gb|EHQ71756.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|375016574|gb|EHS10213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|375017513|gb|EHS11127.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|375020140|gb|EHS13681.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|375025890|gb|EHS19283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|375026798|gb|EHS20176.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|375030962|gb|EHS24257.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|375034031|gb|EHS27209.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|375039561|gb|EHS32485.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|375039717|gb|EHS32635.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|375367180|gb|EHS71148.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|375370404|gb|EHS74213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|375376349|gb|EHS79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|375378040|gb|EHS81464.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|377696321|gb|EHT20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377696694|gb|EHT21049.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377698573|gb|EHT22921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377705237|gb|EHT29545.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377707151|gb|EHT31445.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377707491|gb|EHT31784.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377711709|gb|EHT35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377716064|gb|EHT40249.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377716669|gb|EHT40851.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377719459|gb|EHT43629.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377722780|gb|EHT46905.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377727358|gb|EHT51465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377732367|gb|EHT56418.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377732911|gb|EHT56961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377735760|gb|EHT59790.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377738003|gb|EHT62012.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742058|gb|EHT66043.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746301|gb|EHT70272.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377746640|gb|EHT70610.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|377751138|gb|EHT75072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754176|gb|EHT78085.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|377755900|gb|EHT79798.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|377757459|gb|EHT81347.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377761964|gb|EHT85833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|377766399|gb|EHT90232.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377767166|gb|EHT90979.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771483|gb|EHT95237.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|377772129|gb|EHT95882.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|379992914|gb|EIA14363.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|383362393|gb|EID39746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|383970734|gb|EID86827.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|384229829|gb|AFH69076.1| ClpP [Staphylococcus aureus subsp. aureus 71193]
gi|385195802|emb|CCG15411.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387720067|gb|EIK07989.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387720500|gb|EIK08410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722162|gb|EIK09994.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|387726898|gb|EIK14438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|387728978|gb|EIK16450.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731240|gb|EIK18554.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|387737314|gb|EIK24384.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|387738791|gb|EIK25811.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739281|gb|EIK26289.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746356|gb|EIK33088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|387746991|gb|EIK33707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387748374|gb|EIK35058.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330459|gb|EJE56551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|402347961|gb|EJU82967.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|404439658|gb|AFR72851.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus 08BA02176]
gi|408423155|emb|CCJ10566.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408425145|emb|CCJ12532.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408427133|emb|CCJ14496.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408429120|emb|CCJ26285.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408431108|emb|CCJ18423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408433102|emb|CCJ20387.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408435093|emb|CCJ22353.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408437078|emb|CCJ24321.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|421957225|gb|EKU09549.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|436431277|gb|ELP28630.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505312|gb|ELP41236.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|443405001|gb|ELS63615.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443405495|gb|ELS64098.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|445548141|gb|ELY16396.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|445561343|gb|ELY17551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
Length = 195
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++L++ TG S E + K R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|356496453|ref|XP_003517082.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic-like [Glycine max]
Length = 306
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ LLL RIV++G + V + ++++L+ L +DP I L+INSTG G
Sbjct: 93 DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDALDPTKDIRLFINSTG---------G 143
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S AIYD + ++ +V TVA+G A A ++L GTKGKRF MP+ +IM+ QP +
Sbjct: 144 SLSATMAIYDAVQLVRADVSTVALGIAASTASVILGGGTKGKRFAMPNTRIMVHQPLGGA 203
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A DV I+AKE M N++ + ++++ TG S E V K I R +M A E+G+ID
Sbjct: 204 SG--QAIDVEIQAKEVMHNKNNITRIISSFTGRSFEQVQKDIDRDKYMSPIEAVEYGIID 261
Query: 292 KVLWR 296
V+ R
Sbjct: 262 GVIDR 266
>gi|345531825|pdb|3ST9|A Chain A, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531826|pdb|3ST9|B Chain B, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531827|pdb|3ST9|C Chain C, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531828|pdb|3ST9|D Chain D, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531829|pdb|3ST9|E Chain E, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531830|pdb|3ST9|F Chain F, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531831|pdb|3ST9|G Chain G, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531832|pdb|3STA|V Chain V, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531833|pdb|3STA|A Chain A, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531834|pdb|3STA|B Chain B, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531835|pdb|3STA|C Chain C, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531836|pdb|3STA|E Chain E, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531837|pdb|3STA|F Chain F, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531838|pdb|3STA|G Chain G, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531839|pdb|3STA|I Chain I, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531840|pdb|3STA|K Chain K, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531841|pdb|3STA|L Chain L, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531842|pdb|3STA|M Chain M, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531843|pdb|3STA|N Chain N, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531844|pdb|3STA|S Chain S, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531845|pdb|3STA|T Chain T, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
Length = 197
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 21 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 72 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++L++ TG S E + K R + + AKE+G+ID
Sbjct: 132 QG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLID 189
Query: 292 KVL 294
+V+
Sbjct: 190 EVM 192
>gi|409993296|ref|ZP_11276442.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|409935831|gb|EKN77349.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 237
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+++G P+ V V A++++L+ DP+ I LYINS G G
Sbjct: 51 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPG---------G 101
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ Q++ +V T+ G A M LLA+GT GKR +P ++IMI QP +
Sbjct: 102 SVTAGMGIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGA 161
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ TL LLA+HTG E + R + M + A+E+G+ID
Sbjct: 162 QG--QAIDIEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLID 219
Query: 292 KVLWR 296
+V+ +
Sbjct: 220 QVILK 224
>gi|350566316|ref|ZP_08935001.1| ATP-dependent Clp protease, protease subunit [Peptoniphilus
indolicus ATCC 29427]
gi|348662942|gb|EGY79570.1| ATP-dependent Clp protease, protease subunit [Peptoniphilus
indolicus ATCC 29427]
Length = 194
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + V +LVVA+L++L+ D I +YINS G G
Sbjct: 19 DIYSRLLKERIIFLTGEINDQVADLVVAQLLFLEAEDNTKDIQIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC+V T+ +G A M LL AGTKGKRF +P+A IMI QP +
Sbjct: 70 SVSAGFAIYDTMQYIKCDVSTICMGMAASMGAFLLIAGTKGKRFALPNADIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A++ + R+ L K+L++ TG + + R Y++ + A E+G+ID
Sbjct: 130 QG--QATDIKIQAEKILKVRERLNKILSERTGQPLDKIELDTDRDYYLTADEALEYGIID 187
Query: 292 KVLWR 296
KV+ +
Sbjct: 188 KVIEK 192
>gi|288574917|ref|ZP_06393274.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570658|gb|EFC92215.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 192
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG + + V+A++++L+ +P IY YINS G G
Sbjct: 18 DIYSRLLKDRIVFIGDEINDGLANSVIAQMLFLESENPDKDIYFYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC++ T+ VG A MA +LL AGT GKR +P +++MI QP +
Sbjct: 69 STTAGLAIYDTMQYVKCDISTIVVGIAASMAAVLLTAGTAGKRVSLPRSRVMIHQPWGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+ KE + ++TL ++LA H+G + + + + ++M + A +G++D
Sbjct: 129 RG--KASDMAIQVKEILHTKETLNRILADHSGQDFDKICEDTEKDFYMSADEAMAYGLVD 186
Query: 292 KVLWR 296
KV+ R
Sbjct: 187 KVIDR 191
>gi|427702649|ref|YP_007045871.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
gi|427345817|gb|AFY28530.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
Length = 203
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 102/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGQEVTDGIANSLVAQMLYLDSDDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTMQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPHSRIMIHQP-LGGTSQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + +D L + LA G E VTK R Y + + AKE+G+ID+V+
Sbjct: 141 EIEAREILRIKDMLNQSLAGMCGQPLEKVTKDTDRDYFLSAAEAKEYGLIDRVI 194
>gi|443311871|ref|ZP_21041494.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
gi|442778107|gb|ELR88377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
Length = 219
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + AV + +VA+L++L DP+ I LYINS G G
Sbjct: 32 DIYSRLLRERIVFLGTQVDDAVADSIVAQLLFLDAEDPEKDIQLYINSPG---------G 82
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++ +V T+ G A M LL AG KGKR +P A+IMI QP +
Sbjct: 83 SVTAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGAKGKRMSLPSARIMIHQPLGGA 142
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ L +LLA HTG E + R + M + AK +G+ID
Sbjct: 143 QG--QAVDIEIQAKEILYHKSRLNELLAHHTGKPLERIEADTERDFFMSAEEAKNYGLID 200
Query: 292 KVLWR 296
V+ R
Sbjct: 201 SVISR 205
>gi|325107893|ref|YP_004268961.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
gi|324968161|gb|ADY58939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
Length = 202
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++ +VA+L+YLQ+ DPK+ I++YINS G G
Sbjct: 20 DIYSRLLKDRIIFLGTQVNDTISNSIVAQLLYLQFDDPKSDIHMYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V T +G A M +LLAAG +GKR +P+++IMI QP
Sbjct: 71 SITAGMAIYDTMQFISCDVATYCLGQAASMGAVLLAAGAEGKRAALPNSRIMIHQPLAGM 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + + + ++L KHTG S E + + R M + A+++G++D
Sbjct: 131 EG--TATDLEIHAREVLKVKKRMNEILQKHTGRSLEELERDTDRDNFMTAEEARDYGLVD 188
Query: 292 KVL 294
KVL
Sbjct: 189 KVL 191
>gi|224081363|ref|XP_002306383.1| predicted protein [Populus trichocarpa]
gi|118481948|gb|ABK92906.1| unknown [Populus trichocarpa]
gi|222855832|gb|EEE93379.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 135/260 (51%), Gaps = 26/260 (10%)
Query: 54 SKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDL 113
+KL + A +F+ P S T Y I P ++ ++ ER+ D+
Sbjct: 8 TKLITSTAKPKPSFLLTPKTSTTRAYSLI---PMVIEHSSRGERAY------------DI 52
Query: 114 PSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGME 173
S LL RIV I P+ + +VVA+L++L+ +P PI++Y+NS G G
Sbjct: 53 FSRLLKERIVCINGPINDDTSNVVVAQLLFLESENPSKPIHMYLNSPG---------GHV 103
Query: 174 SEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSG 233
+ G AIYDT+ ++ V+T+ +G A MA LLLA+G KG+R +P+A IMI QP SG
Sbjct: 104 TAGLAIYDTMQYIRSPVNTICLGQAASMASLLLASGAKGERKALPNATIMIHQPSGGYSG 163
Query: 234 LLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKV 293
A D+ I K+ + D L +L KHTG + + K + R Y M AKEFG+ID+V
Sbjct: 164 --QAKDLTIHTKQIVRVWDALNQLYCKHTGKPIDVIQKNMDRDYFMTPEEAKEFGIIDEV 221
Query: 294 LWRGQETIMAEVAPPEEWDK 313
+ + T++ + E K
Sbjct: 222 IDQRPMTLVTDAVGDESKQK 241
>gi|333361419|pdb|3QWD|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361420|pdb|3QWD|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361421|pdb|3QWD|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361422|pdb|3QWD|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361423|pdb|3QWD|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361424|pdb|3QWD|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361425|pdb|3QWD|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361426|pdb|3QWD|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361427|pdb|3QWD|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361428|pdb|3QWD|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361429|pdb|3QWD|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361430|pdb|3QWD|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361431|pdb|3QWD|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361432|pdb|3QWD|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|374977802|pdb|3V5E|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977803|pdb|3V5E|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977804|pdb|3V5E|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977805|pdb|3V5E|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977806|pdb|3V5E|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977807|pdb|3V5E|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977808|pdb|3V5E|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977809|pdb|3V5E|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977810|pdb|3V5E|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977811|pdb|3V5E|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977812|pdb|3V5E|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977813|pdb|3V5E|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977814|pdb|3V5E|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977815|pdb|3V5E|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
Length = 203
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++L++ TG S E + K R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|330994049|ref|ZP_08317979.1| ATP-dependent Clp protease proteolytic subunit 1 [Gluconacetobacter
sp. SXCC-1]
gi|347760102|ref|YP_004867663.1| Clp protease proteolytic subunit [Gluconacetobacter xylinus NBRC
3288]
gi|329758995|gb|EGG75509.1| ATP-dependent Clp protease proteolytic subunit 1 [Gluconacetobacter
sp. SXCC-1]
gi|347579072|dbj|BAK83293.1| Clp protease proteolytic subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 213
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V +V A+L+YL+ ++P I YINS G G
Sbjct: 32 DIYSRLLQERIIFLTGPVYDQVAAVVSAQLLYLESVNPTKEISFYINSPG---------G 82
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ V TV +G A M LLLA G KG+RF +P++++M+ QP +
Sbjct: 83 VVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRVMVHQPSGGA 142
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R L ++ +HTG + E + + + R +M + A+ FG++D
Sbjct: 143 QG--QASDIEIQAQEILTIRKRLNEIYNEHTGRTLEEIERKLERDSYMSAEEAQAFGIVD 200
Query: 292 KVLWR 296
+V+ R
Sbjct: 201 EVVRR 205
>gi|374977816|pdb|3V5I|A Chain A, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977817|pdb|3V5I|B Chain B, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977818|pdb|3V5I|C Chain C, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977819|pdb|3V5I|D Chain D, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977820|pdb|3V5I|E Chain E, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977821|pdb|3V5I|F Chain F, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977822|pdb|3V5I|G Chain G, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977823|pdb|3V5I|H Chain H, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977824|pdb|3V5I|I Chain I, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977825|pdb|3V5I|J Chain J, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977826|pdb|3V5I|K Chain K, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977827|pdb|3V5I|L Chain L, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977828|pdb|3V5I|M Chain M, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977829|pdb|3V5I|N Chain N, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977830|pdb|3V5I|O Chain O, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977831|pdb|3V5I|P Chain P, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977832|pdb|3V5I|Q Chain Q, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977833|pdb|3V5I|R Chain R, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977834|pdb|3V5I|S Chain S, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977835|pdb|3V5I|T Chain T, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977836|pdb|3V5I|U Chain U, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977837|pdb|3V5I|V Chain V, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977838|pdb|3V5I|W Chain W, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977839|pdb|3V5I|X Chain X, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977840|pdb|3V5I|Y Chain Y, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977841|pdb|3V5I|Z Chain Z, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977842|pdb|3V5I|AA Chain a, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977843|pdb|3V5I|BB Chain b, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
Length = 203
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++L++ TG S E + K R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|261408153|ref|YP_003244394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|261284616|gb|ACX66587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
Length = 198
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + A+ ++A+L++L DP+ I++YINS G G
Sbjct: 24 DIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDPEKDIHMYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GF IYDT+ +K +V+T+ G A +LL AG KGKR +P+++IMI QP
Sbjct: 75 SVSAGFGIYDTMQIIKPQVNTICTGFAASYGAILLLAGAKGKRLALPNSEIMIHQPLGGV 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AK + R+ L ++++ TG S E V K + R Y M + AKE+G+ID
Sbjct: 135 QG--QATDIAITAKRILKTREKLAHIISERTGQSVERVEKDMERDYFMSAEEAKEYGIID 192
Query: 292 KVLWR 296
++ +
Sbjct: 193 DIVTK 197
>gi|297621812|ref|YP_003709949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Waddlia
chondrophila WSU 86-1044]
gi|297377113|gb|ADI38943.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Waddlia
chondrophila WSU 86-1044]
gi|337294078|emb|CCB92063.1| ATP-dependent Clp protease proteolytic subunit 2 [Waddlia
chondrophila 2032/99]
Length = 215
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 111/190 (58%), Gaps = 13/190 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG + V +VVA+L++L+ DPK + +Y+NS G G
Sbjct: 35 DIFSRLLKDRIVFIGQDIDDHVANIVVAQLLFLRMEDPKKDVNIYVNSRG---------G 85
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYD L + C V T +G A M LLL AG KGKR+ +P+++IMI QP
Sbjct: 86 YITSGLAIYDVLKWLPCPVSTYCIGQASSMGALLLTAGDKGKRYALPNSRIMIHQPSGGV 145
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ ++AKE + + + ++LA+ TG +EE + K + R M AKE+G+ID
Sbjct: 146 GG--TSADIALQAKEILFLKKRMNEILAECTGQTEEKIAKDLERDLFMSPEEAKEYGLID 203
Query: 292 KVLWR--GQE 299
++ + GQ+
Sbjct: 204 NIIEKKTGQD 213
>gi|340751561|ref|ZP_08688371.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
gi|229420526|gb|EEO35573.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
Length = 191
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 122/212 (57%), Gaps = 23/212 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
+PT++ + + ER+ D+ S LL RI+++G + V +VA+L++L
Sbjct: 3 NPTVIENNGRSERAY------------DIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP+ I +YINS G G+ + G AIYDT+ +K +V TV +G A M L
Sbjct: 51 EAEDPEKDIIMYINSPG---------GVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGAL 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGN 264
LL+AG KGKRF + H++IMI QP + G A+D+ I+AKE + ++ L ++LA +G
Sbjct: 102 LLSAGAKGKRFALEHSRIMIHQPLGGARG--QATDIEIQAKEILRMKEMLSQILANVSGK 159
Query: 265 SEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
S E + + R +M ++ A E+G+ID+V +
Sbjct: 160 SVEEILRDTERDNYMSAQEAVEYGLIDQVFKK 191
>gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
gi|166201797|sp|A7HFV9.1|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
Length = 204
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V +V+A+L++L+ DP I LYINS G G
Sbjct: 21 DIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLA G GKRF +P+A+IMI QP
Sbjct: 72 SVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQPMGGF 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + + L +LAKHT E + K R Y M + AKE+G+ID
Sbjct: 132 QG--QATDIDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAGEAKEYGLID 189
Query: 292 KVL 294
+V+
Sbjct: 190 EVI 192
>gi|386319889|ref|YP_006016052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
gi|323465060|gb|ADX77213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
Length = 195
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + R+ L K+L++ TG E + K R + ++ AKE+G+ID
Sbjct: 130 QG--QATEIEIAAKHILRTRERLNKILSERTGQPIEKIEKDTDRDNFLTAQEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
Length = 195
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++LA+ TG S E + + R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
Length = 195
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LL AG KGKRF +P+++IMI QP
Sbjct: 70 SITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A + +D L K+L++ TG E + K + R M++ AKE+G+ID
Sbjct: 130 QG--QATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEAEEAKEYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 DVI 190
>gi|342217854|ref|ZP_08710492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 135-E]
gi|341592841|gb|EGS35701.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 135-E]
Length = 198
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ + + +++A+L++L+ DP IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVFLSGQVEDHMANVLIAQLLFLEAEDPDKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K ++ T+ +G+A MA +LLAAGT+GKRF +PH+++MI QP
Sbjct: 71 VVTAGLAIYDTMQYIKPDISTICIGSAASMASVLLAAGTRGKRFALPHSQVMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L +L+ HTG E + K R + + AK +G+ID
Sbjct: 131 QG--QATDIEIHAREILRMRKELNGILSAHTGQPLEVIEKDTERDNFLTAEAAKAYGLID 188
Query: 292 KVLWR 296
+L R
Sbjct: 189 DILTR 193
>gi|218248285|ref|YP_002373656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060388|ref|YP_003138276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168763|gb|ACK67500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256590554|gb|ACV01441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 201
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + L+VA+L++L+ DP IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENANLIVAQLLFLEAEDPDKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AGTKGKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L + LA HTG + + + R + M + A E+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKQLLNQHLASHTGQPLDKIAEDTERDFFMSAEDALEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVINR 190
>gi|443320140|ref|ZP_21049261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
gi|442790136|gb|ELR99748.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
Length = 233
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ + V A+L++L+ D + I +YINS G G
Sbjct: 47 DIYSRLLRERIIFIGTPIDDTLANSVTAQLLFLEAEDSEKDIQIYINSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q+ +V T+ G A M LL+ GT GKR +P+A++MI QP +
Sbjct: 98 SVYAGMAIYDTMRQVAPDVATICYGIAASMGAFLLSGGTNGKRMALPNARMMIHQPLGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L +LLA+HTG + E V+ R ++M S +AKE+G+ID
Sbjct: 158 QG--QASDIQIQAREILYIKKRLNQLLAEHTGQTLEKVSMDTERDFYMSSEKAKEYGLID 215
Query: 292 KVLWR 296
+V+ +
Sbjct: 216 QVIHK 220
>gi|145341425|ref|XP_001415810.1| mitochondrial Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576033|gb|ABO94102.1| mitochondrial Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 232
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 15/196 (7%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ P+ V+ L VA+L++L+ + P PI++YINS G G
Sbjct: 48 DIYSRLLKERIVFVNGPIDDNVSSLTVAQLLFLESVSPTQPIWMYINSPG---------G 98
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ + +HT+ VG A M LLLAAG G+R +PH+++M+ QP +
Sbjct: 99 SVTAGLGIYDTMQYVSPPIHTLCVGQASSMGSLLLAAGEPGQRRSLPHSRVMLHQPSGGA 158
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I A+E + R LV++ KHT + + + T+ R M AKEFG+ID
Sbjct: 159 SG--QASDIAIHAQEILNVRQKLVQIYMKHTKQNFDSIGVTLERDTFMTPEDAKEFGLID 216
Query: 292 KVLWRGQETIMAEVAP 307
+V+ ET AE +P
Sbjct: 217 EVI----ETRPAETSP 228
>gi|224475912|ref|YP_002633518.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
carnosus subsp. carnosus TM300]
gi|254763800|sp|B9DJL4.1|CLPP_STACT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222420519|emb|CAL27333.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 194
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R L K+LA+ TG S E + K R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|428201398|ref|YP_007079987.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427978830|gb|AFY76430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 272
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L+YL DP+ I LYINS G G
Sbjct: 85 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLDAEDPEKDIQLYINSPG---------G 135
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
GFAIYD + Q++ +V T+ G A M LL+ G KGKR +P A++MI QP +
Sbjct: 136 SVYAGFAIYDAMQQVRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSARLMIHQPIGGA 195
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A ++ I+A+E + + L +LLA HTG E + R ++M ++ A+E+G+ID
Sbjct: 196 QG--QAVEIEIQAREILYMKQRLNELLAIHTGQPYEKIATDTERDFYMSAQEAQEYGLID 253
Query: 292 KVLWR 296
+V+ R
Sbjct: 254 RVISR 258
>gi|354586092|ref|ZP_09004765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
gi|353183068|gb|EHB48600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
Length = 198
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A++++L DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ VG A M LL AG KGKR+ +P+++IMI QP +
Sbjct: 70 SITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L ++LA+ TG E + K R Y M + AKE+G++D
Sbjct: 130 QG--QATDIEIRARRILKMRDKLNRILAERTGQPLERIEKDTDRDYFMTAEEAKEYGLVD 187
Query: 292 KVLWR 296
+VL +
Sbjct: 188 QVLEK 192
>gi|39996891|ref|NP_952842.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
sulfurreducens PCA]
gi|409912312|ref|YP_006890777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
gi|60389697|sp|Q74C82.1|CLPP_GEOSL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39983779|gb|AAR35169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens PCA]
gi|298505904|gb|ADI84627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
Length = 199
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V LV+A++++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ VG A M LLL+ G KGKRF + H++IMI QP
Sbjct: 69 VVTSGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLKHSRIMIHQPLGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + + L ++LA++TG V R Y M AK++G+ID
Sbjct: 129 QG--QATDIHIHAQEILKLKKRLNEILAENTGQQLAKVEADTERDYFMSGAEAKDYGIID 186
Query: 292 KVLWR 296
++ R
Sbjct: 187 NIIER 191
>gi|312898487|ref|ZP_07757877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
micronuciformis F0359]
gi|310620406|gb|EFQ03976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
micronuciformis F0359]
Length = 202
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 23/211 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
P ++ +Q ERS D+ S LL RI+++ + V V+A+L++L+
Sbjct: 7 PIVVEQSSQGERSY------------DIYSRLLKDRIIFLTGAIDDTVANSVIAQLLFLE 54
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
+P I+LYINS G G+ + G AIYDT+ +K +V T+ VG+A MA +L
Sbjct: 55 ADNPDKDIHLYINSPG---------GVVTAGMAIYDTMRYIKPDVSTICVGSAASMASVL 105
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L AGTKGKRF +PH+++MI QP G ASD+ I A+E + R L +LA HTG
Sbjct: 106 LTAGTKGKRFALPHSQVMIHQPLGGVQG--QASDIEIHAREILRMRKELNGILATHTGQP 163
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
+ + K R M + AK +G++D++L R
Sbjct: 164 VDVIEKDTERDNFMTAEEAKAYGLVDEILIR 194
>gi|425465976|ref|ZP_18845279.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|389831694|emb|CCI25350.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
Length = 233
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L+YL+ DP+ I LYINS G G
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL G GKR +P ++IMI QP +
Sbjct: 98 SVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + + L +LA HTG + + R + M + AKE+G+ID
Sbjct: 158 QG--QASDIAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLID 215
Query: 292 KVLWR 296
+V+ R
Sbjct: 216 QVISR 220
>gi|399155154|ref|ZP_10755221.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium SCGC AAA007-O20]
Length = 198
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 119/216 (55%), Gaps = 23/216 (10%)
Query: 81 DIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAE 140
+++ P ++ S + ER+ D+ S LL R+V++ P+ +VVA+
Sbjct: 5 NLHQIPMVIESSGRTERAY------------DIYSRLLKERVVFMVGPVEDYTANVVVAQ 52
Query: 141 LMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIG 200
L++L+ +P I+LYINS G G + G AIYDT+ +K ++ T+ +G A
Sbjct: 53 LLFLESENPDKDIHLYINSPG---------GSVTAGLAIYDTMQFIKPDISTLCIGQASS 103
Query: 201 MACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAK 260
M LLL AG KGKRF +PHA+ MI QP SG ASD+ I A+E + RD L +L +
Sbjct: 104 MGALLLTAGAKGKRFALPHARCMIHQPLGGFSG--QASDIDIHAQEILKTRDKLNSILKE 161
Query: 261 HTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
HTG S + + K R M + + ++G+IDKVL +
Sbjct: 162 HTGQSMKTIQKDTDRDNFMSASESAKYGLIDKVLTK 197
>gi|257456332|ref|ZP_05621529.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
vincentii ATCC 35580]
gi|257446418|gb|EEV21464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
vincentii ATCC 35580]
Length = 201
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + A +LVVA+L++L+ +P I LYINS G G
Sbjct: 24 DIFSRLLKDRIIFVDGEITDATADLVVAQLLFLESQNPDKDISLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G A+YDT+ + V T+ +G A MA +LLA G+KGKRF +P +++MI QP +
Sbjct: 75 SVTAGLAVYDTMQHIHPNVQTICLGQAASMAAVLLAGGSKGKRFALPSSRVMIHQPWGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + +++ A HTG +E V + + R + M ++ A E+G++D
Sbjct: 135 QG--QASDITIQAREILRLKKLIIQYCAHHTGKTESAVAEDMERDFFMSAQEACEYGIVD 192
Query: 292 KVLWR 296
V+ R
Sbjct: 193 MVMDR 197
>gi|329922862|ref|ZP_08278378.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|328941635|gb|EGG37920.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 193
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + A+ ++A+L++L DP+ I++YINS G G
Sbjct: 19 DIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDPEKDIHMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GF IYDT+ +K +V+T+ G A +LL AG KGKR +P+++IMI QP
Sbjct: 70 SVSAGFGIYDTMQIIKPQVNTICTGFAASYGAILLLAGAKGKRLALPNSEIMIHQPLGGV 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AK + R+ L ++++ TG S E V K + R Y M + AKE+G+ID
Sbjct: 130 QG--QATDIAITAKRILKTREKLAHIISERTGQSVERVEKDMERDYFMSAEEAKEYGIID 187
Query: 292 KVLWR 296
++ +
Sbjct: 188 DIVTK 192
>gi|418296068|ref|ZP_12907912.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539500|gb|EHH08738.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 210
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ + LV A+L++L+ +PK I LYINS G G
Sbjct: 27 DIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKEIALYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ VG A M LLLAAG KG RF P+A+IM+ QP
Sbjct: 78 VVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNARIMVHQPSGGF 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ A++ + + L ++ KHTG + E V KT+ R + MD+ AKE+GVID
Sbjct: 138 QG--QASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMDADEAKEWGVID 195
Query: 292 KVLWRGQE 299
K+L QE
Sbjct: 196 KILTSRQE 203
>gi|336436530|ref|ZP_08616242.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336007395|gb|EGN37420.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 193
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSANIIVAQLLFLEADDPNKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V TV +G A M LL+ G KGKRF +P+A+IMI QP +
Sbjct: 70 SVTAGMAIYDTMQYIKCDVSTVCIGMAASMGSFLLSGGAKGKRFALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R L ++LA +TG E + + R M +++AKE+G+ID
Sbjct: 130 QG--QATEIQIAAEHILKIRKKLNEILAANTGQPLEVIQRDTERDNFMSAQQAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|209525239|ref|ZP_03273781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|376006287|ref|ZP_09783579.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423065156|ref|ZP_17053946.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
gi|209494254|gb|EDZ94567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|375325348|emb|CCE19332.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406713288|gb|EKD08459.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
Length = 237
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+++G P+ V V A++++L+ DP+ I LYINS G G
Sbjct: 51 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPG---------G 101
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ Q++ +V T+ G A M LLA+GT GKR +P ++IMI QP +
Sbjct: 102 SVTAGMGIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGA 161
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ TL LLA+HTG E + R + M + A+E+G+ID
Sbjct: 162 QG--QAIDIEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLID 219
Query: 292 KVLWR 296
V+ +
Sbjct: 220 NVILK 224
>gi|297566268|ref|YP_003685240.1| endopeptidase Clp [Meiothermus silvanus DSM 9946]
gi|296850717|gb|ADH63732.1| Endopeptidase Clp [Meiothermus silvanus DSM 9946]
Length = 196
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 9/183 (4%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ AV +VA++++L + + I LYIN G G
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAAVANTIVAQMLFLDAQNSQQDIRLYINCPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ V T+ VG A +LLAAG GKR+ +PHA IMI QP +
Sbjct: 69 EVTAGLAIYDTMQFVRSPVSTICVGMAASFGAVLLAAGAPGKRYALPHANIMIHQPWVSG 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SD++IR +E N+ L ++LAKHTG E V + R Y M + +AKE+G+ID
Sbjct: 129 GLGGQVSDIMIRVEELAKNKRLLNEILAKHTGQRVEKVERDTDRDYFMSAPQAKEYGLID 188
Query: 292 KVL 294
+V+
Sbjct: 189 QVV 191
>gi|238023189|ref|ZP_04603615.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
gi|237865572|gb|EEP66712.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
Length = 206
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 113/184 (61%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ LVVA+L++L+ +P IY YINS G G
Sbjct: 26 DIYSRLLKERIIFLVGPVNDHTANLVVAQLLFLESENPDKDIYFYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +IYDT+ +K +V T+ +G A M LL+AGTKGKRF +P++++MI QP L S
Sbjct: 77 SVTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFALPNSRVMIHQP-LIS 135
Query: 232 SGL-LPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL ASD+ I A+E + ++ L ++LA+HTG S E + + R M ++ A ++G+I
Sbjct: 136 GGLGGQASDIEIHARELLKLKEKLNQMLAEHTGKSLEQIERDTDRDNFMSAQEAADYGLI 195
Query: 291 DKVL 294
DKV+
Sbjct: 196 DKVI 199
>gi|251797042|ref|YP_003011773.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247544668|gb|ACT01687.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 194
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V +VA+L++L DP I LYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGSAIDDQVANSIVAQLLFLAAEDPDKEISLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K EVHT+ VG A A +LL +G KGKRF +P +++MI QP +
Sbjct: 71 STTAGFAIYDTMQYIKPEVHTICVGMAASFAAILLLSGAKGKRFALPSSEVMIHQPHGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + R L ++ A TG E + K + R Y + ++ A ++G+ID
Sbjct: 131 QG--QASDIAISAKRILDTRARLNRIAADRTGQPLEKIEKDMDRDYFLSAQEALDYGIID 188
Query: 292 KVL 294
+V+
Sbjct: 189 QVV 191
>gi|402312968|ref|ZP_10831891.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnospiraceae bacterium ICM7]
gi|404484025|ref|ZP_11019239.1| ATP-dependent Clp protease proteolytic subunit [Clostridiales
bacterium OBRC5-5]
gi|400367544|gb|EJP20560.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnospiraceae bacterium ICM7]
gi|404342705|gb|EJZ69075.1| ATP-dependent Clp protease proteolytic subunit [Clostridiales
bacterium OBRC5-5]
Length = 193
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ S ++ ER+ D+ S LL RI+++G + LVVA++++L+
Sbjct: 5 PTVIESTSRGERAF------------DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP I LYINS G G G AIYDT+ +KC+V T+ +G A M L
Sbjct: 53 SEDPTKDINLYINSPG---------GSVVAGMAIYDTMQYVKCDVSTICMGMAASMGAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA GTKGKR+ +P+A+IMI QP + G ASD+ I A++ + + L K+LA++T
Sbjct: 104 LAGGTKGKRYALPNAEIMIHQPSGGAQG--QASDIKIVAEQILKTKQKLNKILAENTNQP 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E + + R +M + A +G+IDKV+
Sbjct: 162 IEVIERDTERDNYMSAEEALSYGIIDKVI 190
>gi|434391262|ref|YP_007126209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428263103|gb|AFZ29049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 230
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V + +VA+L++L DP+ I LYINS G G
Sbjct: 43 DIYSRLLRERIIFLGTQVDDTVADSIVAQLLFLDAEDPEKDIQLYINSPG---------G 93
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++C+V T+ G A M LLAAG GKR +P+++IMI QP +
Sbjct: 94 SVTAGMAIYDTMQQIRCDVATICFGLAASMGAFLLAAGAHGKRMSLPNSRIMIHQPLGGA 153
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + + L ++LA HTG E + R + M + AK +G+ID
Sbjct: 154 QG--QAVDIEIQAKEILYLKRKLNEILAYHTGKPLERIEADTERDFFMSAEEAKNYGLID 211
Query: 292 KVLWR 296
+V+ +
Sbjct: 212 QVISK 216
>gi|172035557|ref|YP_001802058.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354554806|ref|ZP_08974109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171697011|gb|ACB49992.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353552960|gb|EHC22353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 202
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AG KGKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L LA HTG + + + R + M + A+E+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKGLLNNHLANHTGQPLDKIAEDTERDFFMSAEEAQEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVINR 190
>gi|162148815|ref|YP_001603276.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545437|ref|YP_002277666.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787392|emb|CAP56987.1| ATP-dependent Clp protease proteolytic subunit 1 (Endopeptidase Clp
1) [Gluconacetobacter diazotrophicus PAl 5]
gi|209533114|gb|ACI53051.1| Endopeptidase Clp [Gluconacetobacter diazotrophicus PAl 5]
Length = 212
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V +V A+L+YL+ ++P I YINS G G
Sbjct: 30 DIYSRLLQERIIFLTGPVYDQVAAVVSAQLLYLESVNPTKEISFYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ V TV +G A M LLLA G KG+RF +P+A++M+ QP +
Sbjct: 81 VVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNARVMVHQPSGGA 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R L ++ HTG + E + + + R +M + A+ FG++D
Sbjct: 141 QG--QASDIEIQAREILTIRQRLNEIYETHTGQTLEDIERRLERDSYMSAEEAQAFGIVD 198
Query: 292 KVL 294
+V+
Sbjct: 199 EVV 201
>gi|411118653|ref|ZP_11391034.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712377|gb|EKQ69883.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 199
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++ + + +VA L+YL D PIYLYINS G G + G
Sbjct: 27 LFRERIIFLSEEVDDGIANAIVAYLLYLDSDDQSKPIYLYINSPG---------GSVTAG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AI+DT+ +K EV T+ VG A M LLAAG+KGKR +PHA+IMI QP S G
Sbjct: 78 MAIFDTMQHIKSEVVTICVGLAASMGAFLLAAGSKGKRLALPHARIMIHQPLGGSRG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I A+E + R L ++LA+ TG E + + R Y M ++ AKE+G+ID+V+
Sbjct: 136 ATDIEIEAREILRIRQQLNEILAERTGQPLEKIERDTDRDYFMSAQEAKEYGLIDQVI 193
>gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|416350488|ref|ZP_11680890.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|338196268|gb|EGO88472.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
Length = 195
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LL AG KGKRF +P+++IMI QP
Sbjct: 70 SITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A + +D L K+L++ TG E + K + R M++ AKE+G+ID
Sbjct: 130 QG--QATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEADEAKEYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 DVI 190
>gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
Length = 197
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + L++A+L++L+ DP ++LYINS G G
Sbjct: 19 DIYSRLLKDRIIFVTGEIEDHMANLIIAQLLFLESEDPDKDVHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ +V T+ VG A MA +LLAAGTKGKR+ +PH+++MI QP +
Sbjct: 70 SVSAGLAIYDTMQYIRPDVSTICVGMAASMASVLLAAGTKGKRYALPHSRVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ + ++LA HTG + E + R + M + A +G+ID
Sbjct: 130 QG--QATDIEIHAREILRIREEMNQILASHTGQTPEQIRLDTERDHFMTAEEAANYGLID 187
Query: 292 KVLWR 296
+V+ +
Sbjct: 188 QVVHQ 192
>gi|73748509|ref|YP_307748.1| ATP-dependent Clp protease proteolytic subunit [Dehalococcoides sp.
CBDB1]
gi|147669290|ref|YP_001214108.1| ATP-dependent Clp protease proteolytic subunit [Dehalococcoides sp.
BAV1]
gi|289432557|ref|YP_003462430.1| endopeptidase Clp [Dehalococcoides sp. GT]
gi|452203514|ref|YP_007483647.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
mccartyi DCMB5]
gi|115311356|sp|Q3ZX82.1|CLPP_DEHSC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082455|sp|A5FRE5.1|CLPP_DEHSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|73660225|emb|CAI82832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dehalococcoides sp. CBDB1]
gi|146270238|gb|ABQ17230.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Dehalococcoides sp. BAV1]
gi|288946277|gb|ADC73974.1| Endopeptidase Clp [Dehalococcoides sp. GT]
gi|452110573|gb|AGG06305.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
mccartyi DCMB5]
Length = 200
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ SLLL RI+++G + V LV+A+L++L DP I LYI+S G G
Sbjct: 23 DIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G A+YDT+ ++ +V T+ VG A MA +LL AG KGKR+ +P+A I + Q +
Sbjct: 74 VISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIHMHQAMGGA 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E M +D L +L KHTG + E + R Y++ +++A E+G+ID
Sbjct: 134 QG--QASDIEIAAREIMRQQDILRNILVKHTGQTMEKIVHDSDRDYYLSAQQAVEYGLID 191
Query: 292 KVLWR 296
++L +
Sbjct: 192 EILQK 196
>gi|428222892|ref|YP_007107062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427996232|gb|AFY74927.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 214
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + +V +++++L++L+ DP+ IY+YINS G G
Sbjct: 38 DIFSRLLRERIIFLGTEVNDSVASVMMSQLLFLEAEDPQKDIYVYINSPG---------G 88
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ +G A M LL+AG KGKR +P+++IMI QP +
Sbjct: 89 SVTSGMAIYDTMQHVRPDVSTICMGLAASMGAFLLSAGAKGKRLSLPNSRIMIHQPLGGA 148
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ TL KLLA+HTG + + + R + M AK +G+ID
Sbjct: 149 RG--QAVDIEIQAKEILYHKRTLNKLLAEHTGQPLDKIEQDTERDFFMSPAEAKNYGLID 206
Query: 292 KVLWR 296
+VL +
Sbjct: 207 QVLTK 211
>gi|46447010|ref|YP_008375.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Protochlamydia amoebophila UWE25]
gi|67460480|sp|Q6MBE9.1|CLPP2_PARUW RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|46400651|emb|CAF24100.1| probable ATP-dependent Clp protease proteolytic subunit P
[Candidatus Protochlamydia amoebophila UWE25]
Length = 207
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG + V +VVA+L++L+ DPK +++YINS G G
Sbjct: 29 DIYSRLLKDRIIFIGTEITDQVANVVVAQLLFLKMEDPKKDVHIYINSLG---------G 79
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+++T +G A M LLL AGTKGKRF +P+++IMI QP
Sbjct: 80 YITSGLAIYDTMQYLGCDINTYCIGQAASMGALLLTAGTKGKRFALPNSRIMIHQPYGGV 139
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++DV ++AKE + + L ++A T E + R ++M + AK++G+ID
Sbjct: 140 GG--TSADVALQAKEILELKKRLNHIMADSTRQPLEKIAADSERDFYMSAVEAKDYGLID 197
Query: 292 KVL 294
+V+
Sbjct: 198 EVV 200
>gi|223042116|ref|ZP_03612288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240950344|ref|ZP_04754614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
gi|223017093|gb|EEF15533.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240295155|gb|EER45974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
Length = 197
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 113/188 (60%), Gaps = 12/188 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ G A M LL+ G KGKRF +P+A++MI QP +
Sbjct: 70 VVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L + +A+H+G S + V R M + AKE+G+ID
Sbjct: 130 RG--QATDIQIQAQEILKLKEMLTRKMAEHSGQSFDKVAADTERDNFMSAEEAKEYGLID 187
Query: 292 KVLW-RGQ 298
KVL RG+
Sbjct: 188 KVLTSRGE 195
>gi|376003777|ref|ZP_09781580.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423066153|ref|ZP_17054943.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
gi|375327808|emb|CCE17333.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406712195|gb|EKD07384.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
Length = 198
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++ + + +VA ++YL DP PIYLYINS G G + G
Sbjct: 27 LFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPSKPIYLYINSPG---------GSVTAG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ ++ +V T+ VG A M LLAAGTKGKR +PHA+IMI QP + G
Sbjct: 78 MAIYDTMQYIRSDVVTICVGMAASMGAFLLAAGTKGKRLALPHARIMIHQPLGGTRG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I AKE + R L ++LA+ +G + E + K R Y M + A E+G+ID+V+
Sbjct: 136 ATDIEIEAKEILRIRKVLNEMLAERSGQTLEKIEKDTDRDYFMSAAEAHEYGLIDQVI 193
>gi|449018573|dbj|BAM81975.1| ATP-dependent Clp protease proteolytic subunit [Cyanidioschyzon
merolae strain 10D]
Length = 263
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + P+ V LVVA+L+YL+ + P + +YI+S G G
Sbjct: 74 DIYSRLLRERIIVLNGPITDTVASLVVAQLLYLESVAPAKALSMYIHSPG---------G 124
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ + VHTV +G A MA LLL AG G+R +P+A++MI QP +
Sbjct: 125 IISAGMAIYDTMQYISAPVHTVCLGQASSMASLLLCAGEPGERRCLPNARVMIHQPSGQA 184
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A E + R+ L +L AKHTG ++ + + R + M + AK FG+ID
Sbjct: 185 GG--QASDIAIHANEILFLRERLHELYAKHTGQNKHVIADKMERDHFMSAEAAKAFGLID 242
Query: 292 KVLWR 296
+V+++
Sbjct: 243 EVIYK 247
>gi|354567563|ref|ZP_08986732.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542835|gb|EHC12296.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 200
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 102/180 (56%), Gaps = 9/180 (5%)
Query: 115 SLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMES 174
S L RI+++G + + ++A ++YL DP IYLYINS G D
Sbjct: 25 SRLARDRIIFLGEEIDDKLANEIIAIMLYLDSEDPGKDIYLYINSPGGAID--------- 75
Query: 175 EGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGL 234
G A+YDT+ +K +V T+ VG A M LLA GTKGKR +PH++IMI QP LP
Sbjct: 76 SGLAVYDTMQHIKSDVVTICVGLAASMGSFLLAGGTKGKRLALPHSRIMIHQPLLPGGMR 135
Query: 235 LPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
ASD+ I A+E + R + ++ A++TG E + K R + M + AKE+G+IDKV+
Sbjct: 136 GQASDIEIEAREILRIRRQMNEIYAQNTGQPIEKIEKDSERDFFMSAAEAKEYGLIDKVI 195
>gi|392971446|ref|ZP_10336842.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|403047222|ref|ZP_10902690.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
gi|392510838|emb|CCI60118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|402762756|gb|EJX16850.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
Length = 194
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R L ++LA+ TG S E + K R + + AKE+G++D
Sbjct: 130 QG--QATEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAKEYGLVD 187
Query: 292 KVL 294
+V+
Sbjct: 188 QVM 190
>gi|403380350|ref|ZP_10922407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JC66]
Length = 193
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V V+A+L++L D + I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDQVANAVIAQLLFLDAQDQEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ +K +V T+ VG A M LLAAG GKR+ +P+++IMI QP +
Sbjct: 70 SISAGMAIFDTMQFIKSDVSTICVGLAASMGAFLLAAGEIGKRYALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ IRAK + R+ L +LA+ T E + K R Y M + +AKE+G+ID
Sbjct: 130 EG--QASDIEIRAKRILRMREKLNHILAERTKQPLERIEKDTDRDYFMWADQAKEYGIID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVI 190
>gi|194334636|ref|YP_002016496.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
gi|194312454|gb|ACF46849.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
Length = 226
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V L++A+L++L+ DP+ IY+YINS G G
Sbjct: 44 DIFSRLLRERIIFLGTPIDEHVASLLMAQLIFLESEDPERDIYIYINSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G IYDT+ ++ EV TV VG A M LLA+G K KR +PH++IMI QP +
Sbjct: 95 SVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAKDKRASLPHSRIMIHQPSGGA 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +D+LI+A+E R L ++LA+HTG + + R M++ AK +G+ID
Sbjct: 155 QG--QETDILIQAREIEKIRKLLDEILAQHTGQDVQKIRSDSERDRWMNAEEAKAYGIID 212
Query: 292 KVLWR 296
++ R
Sbjct: 213 QIFDR 217
>gi|295111709|emb|CBL28459.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes
bacterium SGP1]
Length = 184
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S L RIV++G P+ AV +VA+L+ L D K I LYINS G G
Sbjct: 11 DVYSCLFEDRIVFLGSPIDDAVANGIVAQLLLLANRDEKKEISLYINSPG---------G 61
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ + C V T +G A M +LLAAG KG+R +PHAK+M+ QP +
Sbjct: 62 SVSAGLAIYDTMQFVPCPVATTCIGQAASMGAVLLAAGAKGRRSALPHAKVMLHQPLGGA 121
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASDV + A+E + R+ L L+A HT E V K R + M ++ A+ +G+ID
Sbjct: 122 GG--QASDVALFAQELIKTREVLNALIAHHTAQKVETVEKDTDRDFFMSAQEAQRYGIID 179
Query: 292 KVL 294
+V+
Sbjct: 180 EVI 182
>gi|94958239|gb|ABF47251.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
xylosus]
Length = 194
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R L ++LA+ TG S E + K R + + AKE+G++D
Sbjct: 130 QG--QATEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAKEYGLVD 187
Query: 292 KVL 294
+V+
Sbjct: 188 QVM 190
>gi|354593924|ref|ZP_09011967.1| ATP-dependent Clp protease proteolytic subunit 1 [Commensalibacter
intestini A911]
gi|353673035|gb|EHD14731.1| ATP-dependent Clp protease proteolytic subunit 1 [Commensalibacter
intestini A911]
Length = 206
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ V L+ A+L+YL+ ++PK I YINS G G
Sbjct: 24 DIYSRLLKERIIFLTGPVYDQVASLISAQLLYLESVNPKKEISFYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++C V TV +G A M LLL G KG+RF +P+A++M+ QP +
Sbjct: 75 VVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLCGGEKGQRFALPNARVMVHQPSGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + R L ++ HTG + E + + + R +M + AK+FG+ID
Sbjct: 135 QG--QASDIEIQAKEILAIRKRLNEIYNIHTGRTLEEIEERLERDSYMSAEEAKDFGIID 192
Query: 292 KVLWR 296
+V+ +
Sbjct: 193 QVVTK 197
>gi|320161063|ref|YP_004174287.1| ATP-dependent Clp protease proteolytic subunit [Anaerolinea
thermophila UNI-1]
gi|319994916|dbj|BAJ63687.1| ATP-dependent Clp protease proteolytic subunit [Anaerolinea
thermophila UNI-1]
Length = 201
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ SLLL RIV++G P+ + L+VA+L++L DP+ I +YIN G G
Sbjct: 25 DIYSLLLKERIVFVGTPIDDQIANLIVAQLLFLSREDPEKDIQMYINCPG---------G 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + + TVAVG +LLAAG+KG+R+ +PHA I + QP +
Sbjct: 76 LIYAGMAIYDTMQMIPNRISTVAVGVTASFGTVLLAAGSKGQRYALPHATIHMHQPLGGA 135
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + + L ++L++ TG + + + R ++MDS +A E+G++D
Sbjct: 136 QG--QASDIEIQAREILRLKSQLNQILSQCTGQPMDVIERDTERDFYMDSYQAVEYGLVD 193
Query: 292 KVL 294
KVL
Sbjct: 194 KVL 196
>gi|405365022|ref|ZP_11026468.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397089587|gb|EJJ20496.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 206
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 105/182 (57%), Gaps = 11/182 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G + V ++VA+L++L+ DP I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ VG A M +LL AG KGKR+ +P ++IMI QP
Sbjct: 72 SVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGV 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L +L+ KHT S E V K R Y M + AK +G+ID
Sbjct: 132 RG--QATDIEIQAKEILRMKAKLNELIVKHTAQSIERVEKDTDRDYFMGASEAKAYGIID 189
Query: 292 KV 293
++
Sbjct: 190 EI 191
>gi|357473939|ref|XP_003607254.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|217072528|gb|ACJ84624.1| unknown [Medicago truncatula]
gi|355508309|gb|AES89451.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 238
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 11/202 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ +VVA+L++L+ +P PI +Y+NS G G
Sbjct: 45 DIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPG---------G 95
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ ++T+ +G A M LLL AG KG+R +P+A IMI QP
Sbjct: 96 AVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIMIHQPSGGY 155
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A D+ I K+ + D L +L KHTG + + K + R Y M + AKEFG+ID
Sbjct: 156 SG--QAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAKEFGIID 213
Query: 292 KVLWRGQETIMAEVAPPEEWDK 313
+V+ + T++++ E DK
Sbjct: 214 EVIDQRPMTLVSDAVADEGKDK 235
>gi|297616502|ref|YP_003701661.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
gi|297144339|gb|ADI01096.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
Length = 203
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V L++A+ ++L+ DP I+ YINS G G
Sbjct: 23 DIYSRLLKDRIVFLGSPIDDQVANLIIAQFLFLEAEDPDKDIHFYINSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ ++ +V T+ VG A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 74 SISAGMAIFDTMQYLRPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGT 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + + L ++LA+ TG E + + + R + M + AK +G+ID
Sbjct: 134 QG--QATDIEIHARRIVNLKKRLNQILAERTGQKLEVIERDVERDFFMTAEEAKAYGIID 191
Query: 292 KVLW 295
+ +
Sbjct: 192 DIFY 195
>gi|307151649|ref|YP_003887033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306981877|gb|ADN13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 228
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V + +VA+L+YL DP+ I LYINS G G
Sbjct: 42 DIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQLYINSPG---------G 92
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL+ GTKGKR +P A+IMI QP +
Sbjct: 93 SVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSARIMIHQPIGGA 152
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A ++ I+AKE + + L LLA+HTG E + + R ++M AK++G+ID
Sbjct: 153 QG--QAVEIDIQAKEILYIKQRLNSLLAEHTGQPYERIAEDTERDFYMSVHDAKDYGLID 210
Query: 292 KVLWRGQ 298
+V+ R +
Sbjct: 211 QVISRSE 217
>gi|157364285|ref|YP_001471052.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
lettingae TMO]
gi|167008651|sp|A8F754.1|CLPP_THELT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157314889|gb|ABV33988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
lettingae TMO]
Length = 199
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ S + ER+ D+ S LL RIV++G + V LVVA+L++L+
Sbjct: 9 PTVIESTGRYERAY------------DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLE 56
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP I LYINS G G + G AIYDT+ +K +V T+ VG A MA +L
Sbjct: 57 AEDPDKDIQLYINSPG---------GSVTAGLAIYDTMQYIKSDVVTICVGQAASMAAVL 107
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA+GTKGKRF +P+A+IM+ QP + G P DV I KE + ++ + +L++ TG
Sbjct: 108 LASGTKGKRFALPNARIMLHQPLGGAEG--PVKDVEIITKELLRIKNLINTILSEKTGQP 165
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
+ + K R + M + A ++G++DKV+
Sbjct: 166 LDRIEKDTDRDFFMSAYEALDYGLVDKVI 194
>gi|78212384|ref|YP_381163.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9605]
gi|124013824|sp|Q3ALC4.1|CLPP3_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|78196843|gb|ABB34608.1| Endopeptidase Clp [Synechococcus sp. CC9605]
Length = 200
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 103/174 (59%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K EV T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP-LGGTSRRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + ++ L + L+ +G S E + K R Y + + AKE+G+ID+V+
Sbjct: 141 EIEAREILRMKEMLNRSLSDMSGQSFEKIEKDTDRDYFLSAEEAKEYGLIDRVI 194
>gi|329770311|ref|ZP_08261696.1| ATP-dependent Clp protease proteolytic subunit [Gemella sanguinis
M325]
gi|328836764|gb|EGF86416.1| ATP-dependent Clp protease proteolytic subunit [Gemella sanguinis
M325]
Length = 215
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 23/210 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ +Q ER+ D+ S LL RI+ +G + V + ++L++L+
Sbjct: 5 PTVIEQTSQGERA------------YDIYSRLLKDRIIILGSEVNDQVANSITSQLLFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
D + IY YINS G G + GFAIYDT+ +KC+V T+ +G A M L
Sbjct: 53 AQDSEKDIYFYINSPG---------GSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LAAGT GKR+ +P+A++MI QP + G A+++ I AK + R+ L K+LA TG +
Sbjct: 104 LAAGTIGKRYALPNAEVMIHQPLGGAQG--QATEIEIAAKHILRTREKLNKILADRTGQT 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLW 295
+ + + R ++ + A E+G++DKV++
Sbjct: 162 IKAIERDTERDNYLSAEEACEYGLVDKVMY 191
>gi|33240837|ref|NP_875779.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460521|sp|Q7VAR9.1|CLPP2_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33238366|gb|AAQ00432.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 200
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + V +VA+++YL D PIYLYINS G G
Sbjct: 22 DIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDSTKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LL+AGTK KR +PH++IMI QP L
Sbjct: 73 SVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPHSRIMIHQP-LGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+ ASD+ I AKE + +D L + +A+ TG E + K R Y + ++ AK++G+ID
Sbjct: 132 TSQRQASDIEIEAKEILRIKDMLNRSMAEMTGQPFEKIEKDTDRDYFLSAKEAKDYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|403669499|ref|ZP_10934703.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC8E]
Length = 196
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++L+ DP+ IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LL AGTKGKR+ +P+++IMI QP +
Sbjct: 70 SVTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGTKGKRYALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R+ L ++LA+ TG E + K R +M + +A E+G+ID
Sbjct: 130 QG--QATEIEIAARHILKTREKLNRILAERTGQPIEVIEKDTDRDNYMSAEQALEYGIID 187
Query: 292 KVLWRGQ 298
K++ R +
Sbjct: 188 KIMVRNE 194
>gi|392408625|ref|YP_006445232.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfomonile
tiedjei DSM 6799]
gi|390621761|gb|AFM22968.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfomonile
tiedjei DSM 6799]
Length = 197
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V L++A+L++L+ +P I YINS G G
Sbjct: 18 DIYSRLLKERIVFLGTGVDDYVANLIIAQLLFLESEEPDKDINFYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K ++ T+ +G A M LLLAAGT GKR+ +PHA+I+I QP
Sbjct: 69 IVTSGLAIYDTMQYIKPDIQTICIGQAASMGALLLAAGTHGKRYALPHARILIHQPMGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L +L KHTG E + R Y M + A +G++D
Sbjct: 129 QG--QATDIEIHAREILRMRSELNDILVKHTGQPRERIEADTERDYFMSGQEAATYGIVD 186
Query: 292 KVL 294
V+
Sbjct: 187 HVI 189
>gi|320535322|ref|ZP_08035441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
phagedenis F0421]
gi|320147822|gb|EFW39319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
phagedenis F0421]
Length = 203
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + V +L+VA+L++L+ +P I LYINS G G
Sbjct: 24 DIFSRLLKDRIIFVDGEINDTVADLIVAQLLFLESQNPDKDISLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ ++ T+ +G A MA +LLA G+ GKRF +P +++MI QP
Sbjct: 75 SVTAGLAIYDTMQHIRPKIQTICLGQAASMAAVLLAGGSAGKRFALPSSRVMIHQPWGGV 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + + +K A+HTG SE+ V + R + M + AK +G++D
Sbjct: 135 QG--QASDISIQAKEIIRLKKLTIKYFAEHTGKSEKEVADDMERDFFMSAEEAKAYGIVD 192
Query: 292 KVLWR 296
V+ R
Sbjct: 193 TVMNR 197
>gi|406927441|gb|EKD63473.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 205
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 23/211 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ AQ ERS D+ S LL RI+++G + V L++A+L++L+
Sbjct: 17 PTVLEKTAQGERSY------------DIYSRLLKDRIIFLGTAIDGNVANLIIAQLLFLE 64
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
+PK I +YINS G G + G AIYDT+ +KC+V TV VG A M +L
Sbjct: 65 NENPKKDITMYINSPG---------GHVTAGLAIYDTMQHLKCDVSTVCVGMAASMGAVL 115
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L G KGKRF +P+A++MI QP G A+++ I A+ + + L ++AKH+G
Sbjct: 116 LCGGAKGKRFSLPNAEVMIHQPLGGVEG--QATEIEIHARHILKTKAKLNGIIAKHSGKK 173
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
V K R M + A ++G+IDK++ +
Sbjct: 174 VADVEKDTDRDNFMSAEDALKYGLIDKIVQK 204
>gi|428297818|ref|YP_007136124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428234362|gb|AFZ00152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 201
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L+VA+L+YL D + IY+YINS G G
Sbjct: 17 DIYSRLLRERILFLGQAIDSNVANLIVAQLLYLDSEDSEKDIYMYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AGTKGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L + LA HTG E +++ R + M AK +G+ID
Sbjct: 128 QG--QATDIEIQAKEILYHKRRLNEYLADHTGQPFEKISEDTERDFFMSPEEAKNYGIID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 EVIDR 190
>gi|240146206|ref|ZP_04744807.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
intestinalis L1-82]
gi|257201662|gb|EEU99946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
intestinalis L1-82]
gi|291536689|emb|CBL09801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
intestinalis M50/1]
gi|291537973|emb|CBL11084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
intestinalis XB6B4]
Length = 193
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNETTASLTVAQLLFLESEDPGKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
M + G AIYDT+ +KC+V T+ +G A M LL+ GTKGKR +P+A+IMI QP +
Sbjct: 70 MVTAGLAIYDTMQYIKCDVSTICIGLAASMGAFLLSGGTKGKRLALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + + L ++LA +TG + + R Y+M + AK +G+ID
Sbjct: 130 KG--QATEIQIAAENILKTKKRLNEILAANTGKPYDVIAADTERDYYMSAEEAKAYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 DVI 190
>gi|331211899|ref|XP_003307219.1| Clp protease [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309297622|gb|EFP74213.1| Clp protease [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 257
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 132/256 (51%), Gaps = 30/256 (11%)
Query: 52 FLSKLAAAAAASPEAFVN---RPSNSGTLPYLDIYDSPTLMAS---PAQVERSASYNEHR 105
L+ + +A ASP N RPS+ + P + D L S P +ER E R
Sbjct: 9 LLNGVLKSAIASPGNHFNATRRPSSLLSQPRRMLSDFHRLKGSGLVPMVIER-----EGR 63
Query: 106 PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRD 165
D+ S LL R++++G + A L+VA+L+YL+ P PI LYINS G
Sbjct: 64 GGERAFDIFSRLLRERVIFVGGEINDADANLIVAQLLYLEAESPD-PIELYINSPG---- 118
Query: 166 DGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQ 225
G + G AIYDT+ ++ VHT+ +G A M +LL AG KG R +P++ IMI
Sbjct: 119 -----GSVTAGLAIYDTMQYVRSPVHTICIGQACSMGSILLGAGAKGFRKALPNSTIMIH 173
Query: 226 QPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVT-------KTIRRPYH 278
QP SSG ASD+ IRA E + + L+++ AKH G +E T + + R
Sbjct: 174 QPSGGSSG--QASDMAIRANEILRLKKRLIEIYAKHCGKEDESQTDRCNRFEQALERDKF 231
Query: 279 MDSRRAKEFGVIDKVL 294
MD A+ FG+ID+V+
Sbjct: 232 MDGESAQAFGIIDQVV 247
>gi|225378750|ref|ZP_03755971.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
gi|225209409|gb|EEG91763.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
Length = 202
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP I+LYINS G G
Sbjct: 28 DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPGKDIHLYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
M + G AIYDT+ +KC+V T+ +G A M LLA G KGKR +P+A+IMI QP +
Sbjct: 79 MVTAGLAIYDTMQYIKCDVSTICIGMAASMGAFLLAGGAKGKRLALPNAEIMIHQPSGGA 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + + L ++LA +TG + + R ++M ++ A E+G+ID
Sbjct: 139 KG--QATEIQIAAENILKTKKKLNEILAANTGKPYDVIAADTERDHYMSAQEAMEYGLID 196
Query: 292 KVL 294
V+
Sbjct: 197 NVI 199
>gi|317153552|ref|YP_004121600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
gi|316943803|gb|ADU62854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
Length = 202
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + V L+ A+L++L+ DP+ IY+YINS G G
Sbjct: 19 DIYSRLLKDRIILLSSAIDDHVASLICAQLLFLESEDPEKEIYMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ + V T+ +G A M LLLAAG +G R+ +PH++IMI QP +
Sbjct: 70 VVSAGMAIYDTMQYISAPVSTLCLGQAASMGALLLAAGAQGMRYALPHSRIMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + RD L +LA HTG + + R Y M S A ++G+ID
Sbjct: 130 QG--QASDIHIHAKEILRLRDELNGILAGHTGQKLDKIRDDTERDYFMSSEEAVKYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVM 190
>gi|373114189|ref|ZP_09528406.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|419842321|ref|ZP_14365671.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|421501620|ref|ZP_15948579.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Fusobacterium necrophorum subsp. funduliforme Fnf 1007]
gi|371653076|gb|EHO18482.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|386902230|gb|EIJ67072.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|402265772|gb|EJU15232.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Fusobacterium necrophorum subsp. funduliforme Fnf 1007]
Length = 195
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 109/184 (59%), Gaps = 10/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V +VA+L+YL+ DP I LYINS G G
Sbjct: 18 DIFSRLLRDRIIFLGTEVNDQVAASLVAQLLYLEAEDPTKDIILYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K ++ TV +G A M LLAAGTKGKRF + +++IMI QP +
Sbjct: 69 SVSAGLAIYDTMNYVKPDIQTVCIGQAASMGAFLLAAGTKGKRFALENSRIMIHQPLGGT 128
Query: 232 -SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
SG A+DV I AKE ++ L ++AK+TG S+E V + R ++ + A ++G+I
Sbjct: 129 GSGYHQATDVQIIAKELQATKEKLAGIIAKNTGKSKEEVLEDTERDNYLTAEEAVKYGLI 188
Query: 291 DKVL 294
D V+
Sbjct: 189 DMVM 192
>gi|329767857|ref|ZP_08259372.1| ATP-dependent Clp protease proteolytic subunit [Gemella haemolysans
M341]
gi|328838776|gb|EGF88373.1| ATP-dependent Clp protease proteolytic subunit [Gemella haemolysans
M341]
Length = 215
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 23/210 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ +Q ER+ D+ S LL RI+ +G + V + ++L++L+
Sbjct: 5 PTVIEQTSQGERA------------YDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
D + IY YINS G G + GFAIYDT+ +KC+V T+ +G A M L
Sbjct: 53 AQDSEKDIYFYINSPG---------GSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LAAGT GKR+ +P+A++MI QP + G A+++ I AK + R+ L K+LA TG +
Sbjct: 104 LAAGTIGKRYALPNAEVMIHQPLGGAQG--QATEIEIAAKHILRTREKLNKILADRTGQT 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLW 295
+ + + R ++ + A E+G++DKV++
Sbjct: 162 IKAIERDTERDNYLTAEEACEYGLVDKVMY 191
>gi|399924495|ref|ZP_10781853.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
rhinitidis 1-13]
Length = 194
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++ + A+ +L+VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFASGEVNDAMADLIVAQLLFLESEDPNKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +K +V T+ +G A M LLA+G KGKRF +P++ IMI QP +
Sbjct: 70 SVSAGFAIYDTMNYIKPDVSTICIGMAASMGAFLLASGAKGKRFALPNSDIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A++ + R L ++L+ TG E + + R Y + S AK++G+ID
Sbjct: 130 QG--QASDIQINAEKILKIRHKLNEILSDRTGQPLEKIERDTDRDYWLSSEEAKKYGLID 187
Query: 292 KVLWR 296
KV+ +
Sbjct: 188 KVIEK 192
>gi|358637944|dbj|BAL25241.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. KH32C]
Length = 212
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R+V++ P+ L+VA+L++L+ +P I+ YINS G G
Sbjct: 35 DIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIFFYINSPG---------G 85
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P++++MI QP
Sbjct: 86 SVSAGMAIYDTMQFVKPDVSTLCIGQAASMGSFLLAAGAKGKRFCLPNSRVMIHQPLGGF 145
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R L ++LAKHTG E + K R M ++ A E+G++D
Sbjct: 146 QG--QASDIEIHAREILNIRARLNEMLAKHTGQPVERIEKDTDRDNFMSAKDALEYGIVD 203
Query: 292 KVL 294
KVL
Sbjct: 204 KVL 206
>gi|312109546|ref|YP_003987862.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. Y4.1MC1]
gi|336233940|ref|YP_004586556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718668|ref|ZP_17692850.1| ATP-dependent clp protease, proteolytic subunit clpP [Geobacillus
thermoglucosidans TNO-09.020]
gi|311214647|gb|ADP73251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y4.1MC1]
gi|335360795|gb|AEH46475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368270|gb|EID45543.1| ATP-dependent clp protease, proteolytic subunit clpP [Geobacillus
thermoglucosidans TNO-09.020]
Length = 196
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ V +V++L++L DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 SITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + RD L ++L+++TG + + + R M +++A+E+G+ID
Sbjct: 130 QG--QATEIEIAAKRILFLRDKLNRILSENTGQPIDVIERDTDRDNFMTAQKAQEYGIID 187
Query: 292 KVLWRGQE 299
+VL R E
Sbjct: 188 RVLTRVDE 195
>gi|298243590|ref|ZP_06967397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
gi|297556644|gb|EFH90508.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
Length = 218
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+++G P+ V VVA+L+YLQ D I +YINS G G
Sbjct: 41 DLYSRLLKERIIFVGTPIDDQVANSVVAQLLYLQSEDATKDIQMYINSPG---------G 91
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T +G A+ M ++LAAG KGKR+ +P++ ++I QP +
Sbjct: 92 VIYAGLAIYDTMQWLRPDVSTFCMGMAMSMGAVILAAGQKGKRYTLPNSTVLIHQPLGGA 151
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L ++LAKHTG + E + + R Y++ +++A E+G++D
Sbjct: 152 EG--QAADIEITAREILRLRRNLYEILAKHTGQTIERIMQDSDRNYYLSAQQAVEYGLVD 209
Query: 292 KVL 294
VL
Sbjct: 210 DVL 212
>gi|256827324|ref|YP_003151283.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cryptobacterium curtum DSM 15641]
gi|256583467|gb|ACU94601.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cryptobacterium curtum DSM 15641]
Length = 207
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RIV++G + V VVA+L++L+ DP+ I LYINS G G
Sbjct: 27 DIYSRLLNERIVFLGEAIDDNVANSVVAQLLHLESTDPEKDISLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI DT+ + C+V T+ +G MA +LL+ GTKGKR+ +P+ ++MI QP +
Sbjct: 78 SVTAGLAILDTMDYISCDVSTICIGQCASMAAVLLSNGTKGKRYALPNGRVMIHQPSGGA 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +++ I AKE + RD L +LAK+TG S E + + R M + A+E+G++D
Sbjct: 138 QG--QQTEIAIVAKEILYIRDRLNGILAKNTGQSLETIQQDTERDNFMSAEAAREYGLVD 195
Query: 292 KVL 294
+V+
Sbjct: 196 QVV 198
>gi|430003192|emb|CCF18977.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Rhizobium sp.]
Length = 210
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ + LV A+L++L+ +PK I LYINS G G
Sbjct: 27 DIYSRLLKERIIFLTGPVEDHMASLVCAQLLFLEAENPKKEIALYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LLLAAG KG RF P+++IM+ QP
Sbjct: 78 VVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGEKGMRFATPNSRIMVHQPSGGF 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ A++ + + L ++ KHTG + E V KT+ R + MD+ AKE+GVID
Sbjct: 138 QG--QASDIERHARDILKMKRRLNEVYEKHTGRTYEEVEKTLDRDHFMDADEAKEWGVID 195
Query: 292 KVLWRGQE 299
K+L QE
Sbjct: 196 KILTSRQE 203
>gi|376004076|ref|ZP_09781843.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|375327546|emb|CCE17596.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
Length = 200
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+++G P+ V V A++++L+ DP+ I LYINS G G
Sbjct: 14 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ Q++ +V T+ G A M LLA+GT GKR +P ++IMI QP +
Sbjct: 65 SVTAGMGIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ TL LLA+HTG E + R + M + A+E+G+ID
Sbjct: 125 QG--QAIDIEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLID 182
Query: 292 KVLWR 296
V+ +
Sbjct: 183 NVILK 187
>gi|222055723|ref|YP_002538085.1| ATP-dependent Clp protease proteolytic subunit [Geobacter daltonii
FRC-32]
gi|254763790|sp|B9M0Y1.1|CLPP_GEOSF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221565012|gb|ACM20984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
daltonii FRC-32]
Length = 199
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V+ LV+A+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ VG A M LL+ G KGKRF + +++IMI QP
Sbjct: 69 VVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLANSRIMIHQPLGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + + L +LLA+H+G + E + R Y M AK +G+ID
Sbjct: 129 QG--QATDIHIHAQEILRMKKKLNELLAEHSGQTVEKIEADTERDYFMSGEDAKTYGIID 186
Query: 292 KVLWR 296
++ R
Sbjct: 187 SIITR 191
>gi|254421271|ref|ZP_05034989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
gi|196188760|gb|EDX83724.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
Length = 269
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P++ + + +VA+L++L DP+ + LYINS G G
Sbjct: 84 DIYSRLLRERIVFLGTPVMDDIADSIVAQLLFLDAEDPEKDVQLYINSPG---------G 134
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++ +V T+ G A M LL+ G KGKR +P A+IMI QP +
Sbjct: 135 SVTAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMSLPSARIMIHQPSGGA 194
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+A+E + + L ++LA HTG + R + M + AKE+G+ID
Sbjct: 195 QG--QSADIEIQAREILYLKKRLNEMLADHTGQDISRIEADTERDFFMSAEEAKEYGLID 252
Query: 292 KVLWR 296
+V+ R
Sbjct: 253 QVVSR 257
>gi|282899048|ref|ZP_06307029.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281195964|gb|EFA70880.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 201
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + ++ L+VA+L++L DP+ IY+YINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ V T+ G A M LL+AGTKGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKNIRPNVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L + LA+HTG + + + R + M + A+E+G+ID
Sbjct: 128 QG--QATDIEIQAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQEAREYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|319891770|ref|YP_004148645.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|317161466|gb|ADV05009.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
Length = 195
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + R+ L K+L++ TG E + K R + ++ AKE+G+ID
Sbjct: 130 QG--QATEIEIAAKHILRTRERLNKILSELTGQPIEKIEKDTDRDNFLTAQEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|304440714|ref|ZP_07400598.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304370901|gb|EFM24523.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 194
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++I + +LVVA+L++L+ DP I +YINS G G
Sbjct: 19 DIYSRLLKERIIFISGEINNVTADLVVAQLLFLESEDPNKDIQIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAI+DT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 SVSAGFAIFDTMNYIKPDVSTICIGMAASMGAFLLAAGKKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD++I A++ + R + K+LA+ TG E + R Y + + AKE+G+ID
Sbjct: 130 QG--QASDIMIHAEKIIEIRQRINKILAEETGQPLEKIEHDTDRDYFLSADEAKEYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 NVI 190
>gi|425445342|ref|ZP_18825374.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425453823|ref|ZP_18833576.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389734665|emb|CCI01691.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389800128|emb|CCI20438.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
Length = 233
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L+YL+ DP+ I LYINS G G
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ V T+ G A M LL G GKR +P ++IMI QP +
Sbjct: 98 SVYAGLAIYDTMQQIRPHVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + + L +LA HTG + + R + M + AKE+G+ID
Sbjct: 158 QG--QASDIAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLID 215
Query: 292 KVLWR 296
+V+ R
Sbjct: 216 QVISR 220
>gi|159903903|ref|YP_001551247.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159889079|gb|ABX09293.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 223
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 108/183 (59%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + V +VA+++YL D PIYLYINS G G
Sbjct: 45 DIYTRLGAERILFLGQEVNDGVANSLVAQMLYLDSEDSTKPIYLYINSPG---------G 95
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LL+AGTK KR +PH++IMI QP L
Sbjct: 96 SVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPHSRIMIHQP-LGG 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+ ASD+ I AKE + ++ L + LA+ TG S E + K R Y + ++ A+E+G+ID
Sbjct: 155 TSQRQASDIEIEAKEILRIKEMLNRSLAEMTGQSFEKIEKDTDRDYFLSAKEAEEYGLID 214
Query: 292 KVL 294
KV+
Sbjct: 215 KVI 217
>gi|358051444|ref|ZP_09145643.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
gi|357259050|gb|EHJ08908.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
Length = 194
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++L++ TG S E + + R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAEEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|289551370|ref|YP_003472274.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315658877|ref|ZP_07911744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|418415755|ref|ZP_12988958.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|418636869|ref|ZP_13199207.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|289180901|gb|ADC88146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315496001|gb|EFU84329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|374840430|gb|EHS03924.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|410873613|gb|EKS21547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 195
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++LA+ TG S E + K R + + AK +G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILAERTGQSIEQIQKDTDRDNFLTAEEAKAYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|221633185|ref|YP_002522410.1| Clp protease [Thermomicrobium roseum DSM 5159]
gi|221155739|gb|ACM04866.1| Clp protease [Thermomicrobium roseum DSM 5159]
Length = 205
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V V+A++++L +P+A I LYINS G G
Sbjct: 26 DIYSRLLRDRIIFLGTPIDDQVANAVIAQMLFLAHENPEADIKLYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T VG MA +LLAAGTKGKRF +PH++++I Q
Sbjct: 77 LVYAGLAIYDTMQMIEPDVATYCVGLGASMAAVLLAAGTKGKRFALPHSRVLIHQGTSGF 136
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +P D+ I+A+E + L +LLA HTG E V + R Y M + AK++G++D
Sbjct: 137 RGSVP--DIEIQARETLNLTTMLTELLAFHTGQPFERVKRDTERDYFMSAYEAKDYGIVD 194
Query: 292 KVL 294
VL
Sbjct: 195 HVL 197
>gi|383788383|ref|YP_005472952.1| ATP-dependent Clp protease proteolytic subunit [Caldisericum exile
AZM16c01]
gi|381364020|dbj|BAL80849.1| ATP-dependent Clp protease proteolytic subunit [Caldisericum exile
AZM16c01]
Length = 195
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + +L+VAEL+YL+ +D IYLYINS G GE +
Sbjct: 19 DIYSRLLKDRIIFLTGEIETVHADLIVAELLYLESLDSTQDIYLYINSPG-----GEVI- 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ +K V T+ +G A +A ++LAAG KGKR+ +PH++I+I QP +
Sbjct: 73 ---PGMAIYDTMQYIKAPVATICLGQAASLAAVILAAGRKGKRYALPHSRILIHQPWGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + + ++L+KHTG E + + R Y M AKE+G+ID
Sbjct: 130 QG--QATDIEIQAKELIRIKRMINEILSKHTGQPVEKIQRDTERDYFMSPEEAKEYGLID 187
Query: 292 KVL 294
+++
Sbjct: 188 QII 190
>gi|282898518|ref|ZP_06306508.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281196684|gb|EFA71590.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 201
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + ++ L+VA+L++L DP+ IY+YINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AGTKGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L + LA+HTG + + + R + M + ++E+G+ID
Sbjct: 128 QG--QATDIEIQAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQESREYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|406999542|gb|EKE17145.1| hypothetical protein ACD_10C00602G0002 [uncultured bacterium]
Length = 209
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ LVVA+L++L+ +P IY YINS G G
Sbjct: 32 DIYSRLLKERVIFLVGPVNDITANLVVAQLLFLEADNPDKDIYFYINSPG---------G 82
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +IYDT+ +K +V T+ +G A M LL AG KGKRF +P++++MI QP
Sbjct: 83 SVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPLGGF 142
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + RD L +++A+H+G E + K R + S A E+G+ID
Sbjct: 143 QG--QASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSSAEAAEYGLID 200
Query: 292 KVLWR 296
KVL R
Sbjct: 201 KVLTR 205
>gi|427404659|ref|ZP_18895399.1| ATP-dependent Clp protease proteolytic subunit [Massilia timonae
CCUG 45783]
gi|425716830|gb|EKU79799.1| ATP-dependent Clp protease proteolytic subunit [Massilia timonae
CCUG 45783]
Length = 207
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 113/188 (60%), Gaps = 12/188 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ + L+VA++++L+ +P I LYINS G G
Sbjct: 30 DIYSRLLKERVIFLVGPVNDQMANLIVAQMLFLESENPDKDISLYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ +K +V T+ G A M LLAAG KGKRF +P++++MI QP S
Sbjct: 81 SVSAGLAIFDTMNFIKPDVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRVMIHQPSGGS 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G+ ASD+ I+AKE + R+ L +++A +TG S E + K R M + + E+G+ID
Sbjct: 141 QGM--ASDIEIQAKEILYLRERLARIMADNTGQSIEQIHKDTDRDRFMSAEESVEYGMID 198
Query: 292 KVLW-RGQ 298
KVL RGQ
Sbjct: 199 KVLTSRGQ 206
>gi|372270957|ref|ZP_09507005.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Marinobacterium stanieri S30]
Length = 211
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ + L+VA+L++L+ +P I+LYINS G G
Sbjct: 33 DIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLEAENPDKDIHLYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLA G KGKRF +P+A++MI QP
Sbjct: 84 SVTAGMAIYDTMQFIKPDVSTMCIGQAASMGAFLLAGGAKGKRFALPNARVMIHQPLGGY 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I KE + R+ L +LLA+HTG E V + R MD + A ++G+ID
Sbjct: 144 QG--QATDIEIHTKEILSIREKLNRLLAEHTGQDFETVARDTDRDNFMDPQTAADYGLID 201
Query: 292 KVLWR 296
+VL R
Sbjct: 202 EVLDR 206
>gi|298490862|ref|YP_003721039.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298232780|gb|ADI63916.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 201
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + L+VA+L++L DP+ IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDSGLANLIVAQLLFLDAEDPEKDIYMYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AGTKGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L LA+HTG E + + R + M A+E+G+ID
Sbjct: 128 QG--QATDIEIQAREILYHKRKLNGYLAQHTGQPLERIAEDTERDFFMSPEEAQEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|120554758|ref|YP_959109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinobacter
aquaeolei VT8]
gi|387813879|ref|YP_005429362.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|120324607|gb|ABM18922.1| ATP-dependent Clp protease proteolytic subunit ClpP [Marinobacter
aquaeolei VT8]
gi|381338892|emb|CCG94939.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 211
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 122/218 (55%), Gaps = 21/218 (9%)
Query: 83 YDSPTLMAS----PAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVV 138
+D PT++ S P +E++A D+ S LL R++++ P+ + LVV
Sbjct: 6 FDGPTMITSSGLVPIVIEQTARGER------SFDIYSRLLKERVIFLVGPVEDHMANLVV 59
Query: 139 AELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAA 198
A+L++L+ +P I+LYINS G G S G +IYDT+ +K +V T+ +G A
Sbjct: 60 AQLLFLESENPDKDIHLYINSPG---------GSVSAGMSIYDTMQFVKPDVATLCIGQA 110
Query: 199 IGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 258
M LL+ G KGKR +PH+++MI QP G A+D+ I +E + R+TL +LL
Sbjct: 111 ASMGAFLLSGGAKGKRACLPHSRVMIHQPLGGYQG--QATDIEIHTREILKIRNTLNELL 168
Query: 259 AKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
A+HTG E + + R MD +AKE+G+ID +L +
Sbjct: 169 AEHTGQDIETIARDTDRDNFMDPAQAKEYGLIDTILDK 206
>gi|148263972|ref|YP_001230678.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
uraniireducens Rf4]
gi|189082459|sp|A5GFA0.1|CLPP_GEOUR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146397472|gb|ABQ26105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
uraniireducens Rf4]
Length = 199
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + A++ LV+A+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ VG A M LL+ G KGKRF + +++IMI QP
Sbjct: 69 VVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLTNSRIMIHQPLGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + + L +L+A+HTG E + R Y M AK +G+ID
Sbjct: 129 QG--QATDIHIHAQEILRMKKKLNELMAEHTGQPVEKLEADTERDYFMSGEDAKNYGIID 186
Query: 292 KVLWR 296
++ R
Sbjct: 187 SIISR 191
>gi|418911445|ref|ZP_13465428.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
gi|377724823|gb|EHT48938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
Length = 195
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L +L++ TG S E + K R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNHILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|414161436|ref|ZP_11417696.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876332|gb|EKS24243.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 194
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R L K+L++ TG S E + K R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAATHILKTRAKLNKILSERTGQSIEQIEKDTDRDNFLTADEAKEYGLID 187
Query: 292 KVLW 295
+V+
Sbjct: 188 EVMQ 191
>gi|266623582|ref|ZP_06116517.1| Clp protease [Clostridium hathewayi DSM 13479]
gi|288864626|gb|EFC96924.1| Clp protease [Clostridium hathewayi DSM 13479]
Length = 195
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 108/185 (58%), Gaps = 10/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RI+++G + L VA++++L+ DP I YINS G G
Sbjct: 19 DLFSRLLKDRIIFLGEEVNDETARLAVAQMLFLEAEDPSKDISFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++C+V T+ +G A LLA GTKGKRF +P+A+IMI QP +
Sbjct: 70 SITAGLAIYDTMRYIRCDVSTICIGLAASFGAFLLAGGTKGKRFALPNAEIMIHQPAVEK 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I +++ ++ L ++LA++TG +EE + + R + M + AK +G+ID
Sbjct: 130 IG-GKATDIQIYSEKLQRDKRRLNRILAENTGRTEEEIWRDTERDHFMSAEEAKAYGIID 188
Query: 292 KVLWR 296
V+ +
Sbjct: 189 TVMQK 193
>gi|114327971|ref|YP_745128.1| ATP-dependent endopeptidase Clp proteolytic subunit clpP
[Granulibacter bethesdensis CGDNIH1]
gi|114316145|gb|ABI62205.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Granulibacter bethesdensis CGDNIH1]
Length = 248
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + V+ L+ A+L++L+ +P+ I YINS G G
Sbjct: 63 DIYSRLLKERIIFLTGAVYDQVSALICAQLLFLESENPQKEISFYINSPG---------G 113
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ V TV +G A M LLL AG K KRF +P+A++M+ QP +
Sbjct: 114 VVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLCAGEKDKRFALPNARVMVHQPSGGA 173
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + R L ++ +HTG S E + + + R +M + A++FG++D
Sbjct: 174 QG--QATDIEIQAREILTLRKRLNEIYNRHTGQSIEAIERKLERDTYMSAEEARDFGLVD 231
Query: 292 KVLWR 296
+V+ R
Sbjct: 232 QVVER 236
>gi|333368408|ref|ZP_08460607.1| ATP-dependent Clp protease, protease subunit [Psychrobacter sp.
1501(2011)]
gi|332977273|gb|EGK14064.1| ATP-dependent Clp protease, protease subunit [Psychrobacter sp.
1501(2011)]
Length = 240
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 133/248 (53%), Gaps = 28/248 (11%)
Query: 49 NDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDT 108
N+P KL AA A V R T+ P ++ A+ ERS
Sbjct: 15 NNPHFEKLVAAHDA-----VLRDMRDATVSVPQAALVPMVVEQSARGERSF--------- 60
Query: 109 PPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
D+ S LL R++++ + + L+VA++++L+ +P I+LYINS G
Sbjct: 61 ---DIYSRLLRERVIFLTGQVEDNMANLIVAQMLFLEAENPDKDIHLYINSPG------- 110
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPR 228
G S G A++DT+ +K +V T+ +G A M LLAAG KGKR+ + ++++MI QP
Sbjct: 111 --GSVSAGLAMFDTMNFIKPDVSTICMGGAYSMGSFLLAAGQKGKRYALANSRVMIHQPS 168
Query: 229 LPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
+ G A+D+ I A+E + RD L ++LA+ TG E + + + R Y +D++ AKE+G
Sbjct: 169 GGAQG--QATDIEINAREILKIRDRLNRILAERTGQPLEKIERDVERDYWLDAQEAKEYG 226
Query: 289 VIDKVLWR 296
++D+VL R
Sbjct: 227 LVDEVLER 234
>gi|381207872|ref|ZP_09914943.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR324
cluster bacterium JCVI-SC AAA005]
Length = 202
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI +IG P+ V L++A+L++L+ DP++ I LYIN G G
Sbjct: 19 DIYSRLLKDRIAFIGTPIDDNVANLMIAQLLFLEAEDPESDISLYINCPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ ++ +V T+ +G A M +LLAAG GKR+ +P+ +IMI Q
Sbjct: 70 LVSAGLAIYDTMQYLRPQVQTICIGQAASMGAILLAAGAPGKRYALPNCRIMIHQLMGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A D+ I+A+E + TL +LAKHTG + + +R Y+ AK +G++D
Sbjct: 130 SG--QAEDIDIQAREIVRLTGTLNDILAKHTGKDAGQIEQDTQRDYYFSGEEAKTYGLVD 187
Query: 292 KVLWRGQE 299
V+ + +E
Sbjct: 188 HVMTKREE 195
>gi|407781586|ref|ZP_11128804.1| protease subunit of ATP-dependent Clp protease [Oceanibaculum
indicum P24]
gi|407207803|gb|EKE77734.1| protease subunit of ATP-dependent Clp protease [Oceanibaculum
indicum P24]
Length = 214
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + V+ L+ A+L++L+ +P I LYINS G G
Sbjct: 31 DIYSRLLKERIIFLTGQVHDGVSSLICAQLLFLESENPTKDIALYINSPG---------G 81
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G A+YDT+ ++ +V T+ +G A M LLL AG KGKRF +PH+++M+ QP +
Sbjct: 82 VVTSGLAMYDTMQYIRPDVSTLCIGQAASMGSLLLTAGAKGKRFCLPHSRVMVHQPSGGA 141
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + R L ++ A HTG E + KT+ R M + AK FG+ID
Sbjct: 142 QG--QATDIEIQAREILSIRARLNRIYADHTGQPIEEIEKTLERDRFMSAEEAKNFGLID 199
Query: 292 KVLWR 296
+V+ R
Sbjct: 200 EVVSR 204
>gi|356531505|ref|XP_003534318.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic-like [Glycine max]
Length = 306
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ LLL RIV++G + V + ++++++ L DP I L+INSTG G
Sbjct: 93 DVMGLLLRERIVFLGSSIDDFVADAIMSQMLLLDAQDPTKDIRLFINSTG---------G 143
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S AIYD + ++ +V TVA+G A A ++L GTKGKRF MP+ +IMI QP +
Sbjct: 144 SLSATMAIYDAVQLVRADVSTVALGIAASTASVILGGGTKGKRFAMPNTRIMIHQPLGGA 203
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A DV I+AKE M N++ + ++++ TG S E V K I R +M A E+G+ID
Sbjct: 204 SGQ--AIDVEIQAKEVMHNKNNITRIISSFTGRSFEQVQKDIDRDKYMSPIEAVEYGIID 261
Query: 292 KVLWR 296
V+ R
Sbjct: 262 GVIDR 266
>gi|319788749|ref|YP_004090064.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
albus 7]
gi|315450616|gb|ADU24178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
albus 7]
Length = 196
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+ + + V LV+++L+YL+ DP+ I LYINS G G
Sbjct: 19 DIFSRLLNDRIIMLCEAIDDHVASLVISQLLYLESQDPEKDIDLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++C+V+T+ +G A M LL++GTKGKRF +P+++IMI QP +
Sbjct: 70 SVTAGMAIYDTIQYIRCDVNTICIGMAASMGAFLLSSGTKGKRFSLPNSEIMIHQPLIGG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ +DV I + + R+ L ++LA+++G S E + R ++ ++ A E+G+I
Sbjct: 130 GGISGQCTDVKIHSDHLVATREKLNRILAENSGKSIEQIAIDTERDNYLTAQEAMEYGLI 189
Query: 291 DKVLWR 296
DKV+ +
Sbjct: 190 DKVITK 195
>gi|118444381|ref|YP_878863.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi
NT]
gi|166201817|sp|A0Q2L1.1|CLPP_CLONN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118134837|gb|ABK61881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
novyi NT]
Length = 195
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA+L++L+ DP IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LL AG KGKRF +P+++IMI QP
Sbjct: 70 SITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A + +D L +L++ TG E + K + R M++ AKE+G+ID
Sbjct: 130 QG--QATDIGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEAKEYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 DVI 190
>gi|365838987|ref|ZP_09380240.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaeroglobus geminatus F0357]
gi|364566008|gb|EHM43714.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaeroglobus geminatus F0357]
Length = 202
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 117/211 (55%), Gaps = 23/211 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
P ++ +Q ERS D+ S LL RI+++ + V ++A+L++L+
Sbjct: 7 PIVVEQSSQGERSY------------DIYSRLLKDRIIFLTGGIDDTVANSIIAQLLFLE 54
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
+P I+LYINS G G+ + G A+YDT+ +K +V T+ VG+A MA +L
Sbjct: 55 ADNPDKDIHLYINSPG---------GVVTAGMAVYDTMQYIKPDVSTICVGSAASMASVL 105
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L AGTKGKRF +PH+++MI QP G A+D+ I A+E + R L +LA HTG
Sbjct: 106 LTAGTKGKRFALPHSQVMIHQPLGGVQG--QATDIEIHAREILRMRKELNGILASHTGRP 163
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
E + K R M + AK +G++D++L R
Sbjct: 164 IEVIEKDTERDNFMTAEEAKAYGLVDEILIR 194
>gi|310820094|ref|YP_003952452.1| ATP-dependent CLP protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
gi|309393166|gb|ADO70625.1| ATP-dependent Clp protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
Length = 207
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 105/182 (57%), Gaps = 11/182 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G + V+ +V++L++L+ DP I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDINLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ +G A M +LL AG KGKR+ +P ++IMI QP
Sbjct: 72 SVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQPLGGV 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R L L+ KHTG E V K R Y+M + +K +G+ID
Sbjct: 132 RG--QATDIEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGATESKAYGIID 189
Query: 292 KV 293
++
Sbjct: 190 EI 191
>gi|224094113|ref|XP_002310077.1| predicted protein [Populus trichocarpa]
gi|222852980|gb|EEE90527.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ + +VVA+L++L+ +P PI++Y+NS G G
Sbjct: 51 DIFSRLLKERIVCINGPIDDDTSHVVVAQLLFLESENPSKPIHMYLNSPG---------G 101
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ V T+ +G A MA LLLAAG KG+R +P+A IMI QP
Sbjct: 102 QVTAGLAIYDTMQYIRSPVTTICLGQAASMASLLLAAGAKGERKALPNATIMIHQPSGGY 161
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A D+ I K+ + D L +L KHTG + + K + R Y M AKEFG+ID
Sbjct: 162 SG--QAKDMTIHTKQIVRVWDALNQLYCKHTGQPLDVIQKNMDRDYFMTPEEAKEFGIID 219
Query: 292 KVLWRGQETIMAEVAPPEEWDK 313
V+ + T++ + E K
Sbjct: 220 DVIDQRPMTLVTDAVDDEGKQK 241
>gi|81301334|ref|YP_401542.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|81170215|gb|ABB58555.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 244
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + AV + +VA+L++L+ DP+ I LYINS G G
Sbjct: 57 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPG---------G 107
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q+ +V T+ G A M LL+ G +GKR +P A+IMI QP +
Sbjct: 108 SVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGA 167
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + ++ TL LLA+HTG E + R + M AK +G+ID
Sbjct: 168 QG--QAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLID 225
Query: 292 KVLWR 296
+VL R
Sbjct: 226 QVLTR 230
>gi|404417286|ref|ZP_10999088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
gi|403490299|gb|EJY95842.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
Length = 194
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LL+AG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLSAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R L K+LA+ TG S E + K R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTRAKLNKILAERTGQSIEKIEKDTDRDNFLSADEAKEYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 HVM 190
>gi|57234482|ref|YP_181451.1| ATP-dependent Clp protease proteolytic subunit [Dehalococcoides
ethenogenes 195]
gi|270308033|ref|YP_003330091.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
sp. VS]
gi|115311355|sp|Q3Z8J8.1|CLPP_DEHE1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|57224930|gb|AAW39987.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dehalococcoides ethenogenes 195]
gi|270153925|gb|ACZ61763.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
sp. VS]
Length = 200
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ SLLL RI+++G + V LV+A+L++L DP I LYI+S G G
Sbjct: 23 DIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G A+YDT+ ++ +V T+ VG A MA +LL AG KGKR+ +P+A I + Q +
Sbjct: 74 VISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIHMHQAMGGA 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E M +D L +L KHTG E + R Y++++++A E+G+ID
Sbjct: 134 QG--QASDIEIAAREIMRQQDILRNILVKHTGQPMEKIIHDSDRDYYLNAQQAVEYGLID 191
Query: 292 KVLWR 296
++L +
Sbjct: 192 EILQK 196
>gi|119476204|ref|ZP_01616556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2143]
gi|119450831|gb|EAW32065.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2143]
Length = 206
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 118/192 (61%), Gaps = 12/192 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ + + L+VA+L++L+ +P I+LYINS G G
Sbjct: 27 DIYSRLLKERVIFMVGQVEDNMANLIVAQLLFLESENPDKDIHLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +IYDT+ ++ +V T+ +G A M LLA G KGKRF++P+A+ MI QP +
Sbjct: 78 SVTAGLSIYDTMQFIRPDVSTMCIGQAASMGAFLLAGGAKGKRFILPNARTMIHQPSGGA 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E ++ R+ L +L+A+HTGN E + + R M++ +K +G++D
Sbjct: 138 QG--QATDIDIQAREILIIRERLNQLMAEHTGNDVETIRRDTERDNFMNADDSKTYGLVD 195
Query: 292 KVLWRGQETIMA 303
+VL RG+ ++ A
Sbjct: 196 EVL-RGRNSVEA 206
>gi|160939893|ref|ZP_02087240.1| hypothetical protein CLOBOL_04784 [Clostridium bolteae ATCC
BAA-613]
gi|158437327|gb|EDP15092.1| hypothetical protein CLOBOL_04784 [Clostridium bolteae ATCC
BAA-613]
Length = 196
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L++A+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLSDRIIFLGEEVSDTSASLIIAQLLFLESTDPDKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G+A+YDT+ +KC+V T+ +G A LLA G GKR +P+++IMI QP +
Sbjct: 70 SVTAGWAVYDTMQYIKCDVSTICLGLAASFGAFLLAGGAHGKRMALPNSEIMIHQPAIHG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+G+ PASD+ I + +R L ++LA +TG SEE + + R M + A E+G+I
Sbjct: 130 NGIQGPASDIKIMSDYMQKSRQRLNRVLAVNTGRSEEEIARDTERDNFMSAEEALEYGLI 189
Query: 291 DKVLWR 296
D +L R
Sbjct: 190 DSILTR 195
>gi|115374875|ref|ZP_01462148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|115368093|gb|EAU67055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
Length = 204
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 105/182 (57%), Gaps = 11/182 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G + V+ +V++L++L+ DP I LYINS G G
Sbjct: 18 DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDINLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T+ +G A M +LL AG KGKR+ +P ++IMI QP
Sbjct: 69 SVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQPLGGV 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R L L+ KHTG E V K R Y+M + +K +G+ID
Sbjct: 129 RG--QATDIEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGATESKAYGIID 186
Query: 292 KV 293
++
Sbjct: 187 EI 188
>gi|443316648|ref|ZP_21046084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442783734|gb|ELR93638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 226
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ AV + +VA+L++L +P+ + +YINS G G
Sbjct: 41 DIYSRLLRERIVFLGTPVTDAVADAIVAQLLFLDAEEPEKDVQIYINSPG---------G 91
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++ +V T+ G A M LL G KGKR +P ++IM+ QP +
Sbjct: 92 SVTAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLCGGAKGKRLSLPSSRIMVHQPLGGA 151
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + ++ L +L+A H+G + E + R ++M + AK +G+ID
Sbjct: 152 QG--QAVDIEIQAREILYHKQRLNELIAHHSGQTLERIEADTERDFYMSAEEAKRYGLID 209
Query: 292 KVLWR 296
+V+ R
Sbjct: 210 QVVER 214
>gi|434402516|ref|YP_007145401.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
gi|428256771|gb|AFZ22721.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
Length = 197
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 104/178 (58%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++G + + ++A L+YL DP I+LYINS G GM + G
Sbjct: 27 LYRERIIFLGRDIDDEIANQIIAVLLYLDSDDPGKDIFLYINSPG---------GMVTSG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP + G
Sbjct: 78 LAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
ASD+ I A+E + R L ++ A +TG + K + R + M ++ AKE+G+ID+V+
Sbjct: 136 ASDIEIEAREILRIRHQLNQIYADNTGQIITKIEKDMDRDFFMSAQEAKEYGLIDRVI 193
>gi|187251176|ref|YP_001875658.1| endopeptidase Clp [Elusimicrobium minutum Pei191]
gi|259585952|sp|B2KCS5.1|CLPP_ELUMP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|186971336|gb|ACC98321.1| Endopeptidase Clp [Elusimicrobium minutum Pei191]
Length = 195
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 119/210 (56%), Gaps = 23/210 (10%)
Query: 89 MASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGM---PLVPAVTELVVAELMYLQ 145
M P +E++ Y D+ S LL RI+++G + A +++A+L+YL
Sbjct: 1 MIIPTIIEKNVGY----------DIFSRLLKDRIIFVGGREGEVDTASATMIIAQLLYLD 50
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
D + I LYINS G G+ + G AIYDT+ +K + T+ +G A+ +L
Sbjct: 51 AEDSEREINLYINSPG---------GLVTAGLAIYDTMQFIKAPITTICMGQAMSFGAVL 101
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGN 264
LAAG+KGKR+ +PHA+IMI QP + G+ +D+ I + E N++ L+ +LA HTG
Sbjct: 102 LAAGSKGKRYALPHARIMIHQPLIWGGGISGQVTDIEIESNELRKNKEHLLDILAHHTGQ 161
Query: 265 SEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
+E + + R Y+M ++ AK +G+ID+VL
Sbjct: 162 DKEKIRQDSERNYYMSAQEAKAYGLIDEVL 191
>gi|121605848|ref|YP_983177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
gi|120594817|gb|ABM38256.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
Length = 216
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ LVVA+L++L+ +P I YINS G G
Sbjct: 41 DIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDKDISFYINSPG---------G 91
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LL++GTKGKRF +P++++MI QP +
Sbjct: 92 SVTAGMAIYDTMQFIKPDVSTLCVGMAASMGAFLLSSGTKGKRFSLPNSRVMIHQPSGGA 151
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A++ + RD L ++LA +TG + E + + R Y M + AK +GV+D
Sbjct: 152 QG--QASDIEIHARDILKTRDQLNRILAHNTGQTVEKIERDTERDYFMFADEAKAYGVVD 209
Query: 292 KVLWR 296
+V+ +
Sbjct: 210 QVISK 214
>gi|60416366|sp|Q8RC25.2|CLPP_THETN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 195
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + LV+A++++L+ DP I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A MA LLAAG KGKRF +P+++IMI QP
Sbjct: 70 SITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGM 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + RD L ++L+++TG E + + R Y M + AK +G+ID
Sbjct: 130 QG--QATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEAKTYGIID 187
Query: 292 KVLWR 296
+L R
Sbjct: 188 DILVR 192
>gi|56751582|ref|YP_172283.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81301346|ref|YP_401554.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|18203213|sp|Q9L4P3.1|CLPP3_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|67460443|sp|Q5N1Q7.1|CLPP2_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|7106112|emb|CAB75988.1| ATP-dependent Clp protease third proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686541|dbj|BAD79763.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170227|gb|ABB58567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 199
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 105/183 (57%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA+L+YL D PIYLYINS G G
Sbjct: 22 DIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K V T+ +G A M LL AG+KGKR +PH++IMI QP L
Sbjct: 73 SVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQP-LGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G ASD+ I AKE + + L +++A TG E + K R Y M + A+E+G+ID
Sbjct: 132 TGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMSAEEAREYGLID 191
Query: 292 KVL 294
+V+
Sbjct: 192 QVI 194
>gi|399520089|ref|ZP_10760870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399111981|emb|CCH37429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 213
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ + L+ A+L++L+ +P I+LYINS G G
Sbjct: 35 DIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHLYINSPG---------G 85
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T +G A M LLA G KGKRF +P++++MI QP
Sbjct: 86 SVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGF 145
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + R+ L +LLA+HTG S E + + R M + RA E+G++D
Sbjct: 146 QG--QASDIEIHAKEILFIRERLNELLAQHTGQSLETIERDTNRDNFMSASRAVEYGLVD 203
Query: 292 KVLWRGQ 298
V + Q
Sbjct: 204 AVHEKRQ 210
>gi|358067641|ref|ZP_09154119.1| ATP-dependent Clp protease proteolytic subunit [Johnsonella ignava
ATCC 51276]
gi|356694294|gb|EHI55957.1| ATP-dependent Clp protease proteolytic subunit [Johnsonella ignava
ATCC 51276]
Length = 193
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ S ++ ER+ D+ S LL RI+++G + LVVA+L++L+
Sbjct: 5 PTVIESTSRGERAF------------DIYSRLLKDRIIFLGEEVNDVTAGLVVAQLLFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP I LYINS G G G AIYDT+ +KC+V T+ +G A M L
Sbjct: 53 SEDPSKDINLYINSPG---------GSVVSGMAIYDTMQYVKCDVSTICMGMAASMGAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA G KGKR+ +P+++IMI QP + G A+++ I A++ + +R L ++LA +TG
Sbjct: 104 LAGGAKGKRYALPNSEIMIHQPSGGARG--QATEIQIVAEQILKDRKRLNEMLAANTGQP 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E + + R Y+M + A +G++DKV+
Sbjct: 162 IEVIERDTERDYYMSAEEAMSYGIVDKVI 190
>gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
Length = 202
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ + L++A+L++L+ DP+ IY+YINS G G
Sbjct: 28 DIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFLESEDPEKDIYMYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LL+AG KGKR+ +P ++IMI QP
Sbjct: 79 VVTSGLAIYDTMRYIKPDVVTICMGQAASMGAFLLSAGAKGKRYALPSSRIMIHQPLGGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + + L + LA+HTG E + + R + M + A E+G+ID
Sbjct: 139 QG--QATDIEIHAKEILRLKKYLNERLAEHTGQPLEKIERDTERDFFMSAHDAVEYGLID 196
Query: 292 KVLWR 296
KV+ +
Sbjct: 197 KVIEK 201
>gi|152991609|ref|YP_001357330.1| ATP-dependent Clp protease proteolytic subunit [Sulfurovum sp.
NBC37-1]
gi|166214717|sp|A6Q675.1|CLPP_SULNB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151423470|dbj|BAF70973.1| ATP-dependent Clp protease, proteolytic subunit [Sulfurovum sp.
NBC37-1]
Length = 195
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + V +VA+L++L+ DP IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDQVASSIVAQLLFLEAQDPDKDIYFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +++DT+ +K ++ T+ +G A M LLA+GTKGKR+ +PHA+IMI QP +
Sbjct: 70 VITSGLSMFDTMNYIKPDIVTICIGQAASMGAFLLASGTKGKRYALPHARIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ++D+ I+A+E +DTL +++A+ TG + + + K R M ++ A E+G+ID
Sbjct: 130 QG--QSTDIQIQAQEIQRLKDTLNEIMAEKTGKTAKRIEKDTERDNFMSAKEAVEYGLID 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLTK 192
>gi|413923166|gb|AFW63098.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 395
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 113/193 (58%), Gaps = 11/193 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 184 DIFSRLLKERIVCINGPIADDTASLVVAQLLFLESENPLKPVHLYINSPG---------G 234
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ +G A M LLLAAG G+R +P+A++MI QP +
Sbjct: 235 VVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGA 294
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ KHT + + + + R MD A+++G+ID
Sbjct: 295 QGQ--ATDIAIQAKEILKLRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPDEARDWGLID 352
Query: 292 KVLWRGQETIMAE 304
+V+ ++M +
Sbjct: 353 EVIENRPASLMPD 365
>gi|334134662|ref|ZP_08508166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333607817|gb|EGL19127.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 195
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V ++A+L++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQVANSIIAQLLFLEAEDPQKEISLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYD + +K VHT+ G A A +LL AG KGKRF +P+++IMI QP
Sbjct: 71 STSAGFAIYDAMQLVKPPVHTICTGFAASFAAILLLAGEKGKRFALPNSEIMIHQPHGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + R+ L ++ ++ TG + V + + R Y M + A+E+G+ID
Sbjct: 131 QG--QASDIAISAKRILGIRERLNRITSERTGQPVDKVDRDMDRDYFMSAEEAREYGIID 188
Query: 292 KVL 294
+V+
Sbjct: 189 QVV 191
>gi|257455804|ref|ZP_05621030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enhydrobacter
aerosaccus SK60]
gi|257446818|gb|EEV21835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enhydrobacter
aerosaccus SK60]
Length = 224
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 114/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R+V++ + + L+VA+L++L+ +P+ I+LYINS G G
Sbjct: 46 DIYSRLLRERVVFLAGQVEDHMANLIVAQLLFLEAENPEKDIHLYINSPG---------G 96
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G A++DT+ ++ +V T+ +G A M LLAAG KGKR+ + +A++MI QP +
Sbjct: 97 SVSAGLAVFDTMNFIQPQVSTICMGGAYSMGSFLLAAGEKGKRYALANARVMIHQPSGGA 156
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ L K+LA+ TG E + + + R Y +D++ AKE+G+ID
Sbjct: 157 QG--QATDIEINAREILKIRERLNKILAERTGQPLEKIARDVERDYWLDAQEAKEYGLID 214
Query: 292 KVLWR 296
+VL +
Sbjct: 215 EVLEK 219
>gi|149178551|ref|ZP_01857138.1| ATP-dependent clp protease proteolytic subunit [Planctomyces maris
DSM 8797]
gi|148842569|gb|EDL56945.1| ATP-dependent clp protease proteolytic subunit [Planctomyces maris
DSM 8797]
Length = 201
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 107/188 (56%), Gaps = 11/188 (5%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
D D+ S LL RIV +G + V + +VA+L++LQ+ DP+A I+ YINS G
Sbjct: 15 DERAMDIYSRLLQDRIVMMGSQVNDQVAQSLVAQLLFLQFDDPEADIHFYINSPG----- 69
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
G + G AIYDT+ + C+V T +G A M LLL AG GKR +P+++IMI Q
Sbjct: 70 ----GSVTAGMAIYDTMQYISCDVATYCIGQAASMGALLLTAGAAGKRNALPNSRIMIHQ 125
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P G A+D+ I AKE + + L ++L HTG + E + + R MD++ AK
Sbjct: 126 PLAGMQG--TATDLEIHAKEVLKMKRRLNEILLHHTGQTLEKIEEDTDRDNFMDAQEAKS 183
Query: 287 FGVIDKVL 294
+G+ID VL
Sbjct: 184 YGLIDNVL 191
>gi|186686250|ref|YP_001869446.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186468702|gb|ACC84503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 203
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + L+VA+L+YL DP+ IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDNNIANLIVAQLLYLDAEDPEKDIYMYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L LA HTG E + + R + M A+E+G+ID
Sbjct: 128 QG--QATDIEIQAREILYHKKRLNDYLADHTGQPIERIAEDTERDFFMSPEEAREYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis RP62A]
gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|416124873|ref|ZP_11595668.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|417647658|ref|ZP_12297492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|417656247|ref|ZP_12305934.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|417658376|ref|ZP_12308010.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|417910192|ref|ZP_12553919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|417911815|ref|ZP_12555515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|417914206|ref|ZP_12557859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|418326030|ref|ZP_12937226.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|418329732|ref|ZP_12940785.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418411293|ref|ZP_12984561.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
gi|418604876|ref|ZP_13168211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|418608483|ref|ZP_13171678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|418608689|ref|ZP_13171871.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|418611518|ref|ZP_13174598.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|418614099|ref|ZP_13177086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|418618003|ref|ZP_13180887.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|418622588|ref|ZP_13185333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|418623648|ref|ZP_13186350.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|418626020|ref|ZP_13188648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|418629665|ref|ZP_13192161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|418633713|ref|ZP_13196119.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|418665858|ref|ZP_13227295.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|419768236|ref|ZP_14294368.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|419771145|ref|ZP_14297205.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|420162870|ref|ZP_14669625.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|420166724|ref|ZP_14673405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|420167312|ref|ZP_14673973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|420171404|ref|ZP_14677946.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|420172098|ref|ZP_14678613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|420175404|ref|ZP_14681842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|420176672|ref|ZP_14683079.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|420180409|ref|ZP_14686641.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|420182492|ref|ZP_14688628.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|420185937|ref|ZP_14692013.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|420187913|ref|ZP_14693928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|420189984|ref|ZP_14695932.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|420193132|ref|ZP_14698987.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|420195431|ref|ZP_14701223.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|420197784|ref|ZP_14703505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|420199727|ref|ZP_14705398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|420201234|ref|ZP_14706859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|420203772|ref|ZP_14709333.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|420206801|ref|ZP_14712306.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|420208208|ref|ZP_14713678.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|420212385|ref|ZP_14717736.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|420213579|ref|ZP_14718885.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|420216619|ref|ZP_14721823.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|420219555|ref|ZP_14724570.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|420222322|ref|ZP_14727243.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|420225248|ref|ZP_14730082.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|420226678|ref|ZP_14731457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|420228998|ref|ZP_14733709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|420231355|ref|ZP_14736007.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|420233994|ref|ZP_14738568.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|421607631|ref|ZP_16048869.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|38257586|sp|Q8CTE0.1|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460168|sp|Q5HQW0.1|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis RP62A]
gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|341651029|gb|EGS74836.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|341652326|gb|EGS76115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|341653290|gb|EGS77061.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|365226941|gb|EHM68152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|365229855|gb|EHM70983.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374401382|gb|EHQ72456.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|374403769|gb|EHQ74765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|374407975|gb|EHQ78819.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|374409868|gb|EHQ80637.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|374817066|gb|EHR81256.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|374821672|gb|EHR85724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|374822416|gb|EHR86438.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|374826344|gb|EHR90243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|374829958|gb|EHR93749.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|374833196|gb|EHR96891.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|374834043|gb|EHR97705.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|374838660|gb|EHS02198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|383360447|gb|EID37843.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|383362116|gb|EID39473.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|394233097|gb|EJD78707.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|394235867|gb|EJD81417.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|394238050|gb|EJD83534.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|394238941|gb|EJD84398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|394243339|gb|EJD88705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|394243569|gb|EJD88931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|394250037|gb|EJD95239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|394250752|gb|EJD95922.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|394252238|gb|EJD97276.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|394253029|gb|EJD98045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|394255555|gb|EJE00504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|394259277|gb|EJE04135.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|394260255|gb|EJE05070.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|394263226|gb|EJE07965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|394265370|gb|EJE10027.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|394271477|gb|EJE15970.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|394273140|gb|EJE17575.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|394274354|gb|EJE18775.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|394276904|gb|EJE21237.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|394279819|gb|EJE24116.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|394282082|gb|EJE26294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|394285155|gb|EJE29239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|394288813|gb|EJE32713.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|394289374|gb|EJE33258.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|394291646|gb|EJE35441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|394293803|gb|EJE37505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|394298294|gb|EJE41871.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|394299681|gb|EJE43216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|394302921|gb|EJE46355.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|394304687|gb|EJE48083.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|406656682|gb|EKC83083.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|410892837|gb|EKS40628.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
Length = 194
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++L++ TG S E + + R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|386748125|ref|YP_006221333.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cetorum MIT 99-5656]
gi|384554367|gb|AFI06123.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cetorum MIT 99-5656]
Length = 195
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIILLSGEINDSVASSIVAQLLFLEAEDPEKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GF+IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 70 VVTSGFSIYDTMNFIRPDVCTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + + L ++A+++G E + K R ++M + AKE+G+ID
Sbjct: 130 QG--QASDIEITAKEIIRLKGLLNSIMAENSGQDLEQIAKDTDRDFYMSALEAKEYGLID 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLQK 192
>gi|428313411|ref|YP_007124388.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255023|gb|AFZ20982.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 198
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + ++A ++YL D IYLYINS G G
Sbjct: 22 DIYNRLYRERIIFLGQEVDDEIANQIIAVMLYLDSEDNSKDIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
M + G AIYDT+ +K +V T+ VG A M LLAAG KGKR +PH++IMI QP +
Sbjct: 73 MVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGKKGKRLALPHSRIMIHQPSGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L ++ A +TG + E + K + R + + ++ AKE+G+ID
Sbjct: 133 RG--QATDIEIEAREIIRIRHQLNQIYANNTGQTLEKIEKDMDRDFFLSAQEAKEYGLID 190
Query: 292 KVL 294
+V+
Sbjct: 191 RVI 193
>gi|71907348|ref|YP_284935.1| ATP-dependent Clp protease proteolytic subunit [Dechloromonas
aromatica RCB]
gi|110816458|sp|Q47FB6.1|CLPP_DECAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71846969|gb|AAZ46465.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dechloromonas
aromatica RCB]
Length = 209
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ LVVA+L++L+ +P IY YINS G G
Sbjct: 32 DIYSRLLKERVIFLVGPVNDVTANLVVAQLLFLEAENPDKDIYFYINSPG---------G 82
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +IYDT+ +K +V T+ +G A M LL AG KGKRF +P++++MI QP
Sbjct: 83 SVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPLGGF 142
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + RD L +++A+H+G E + K R + + A E+G+ID
Sbjct: 143 QG--QASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSAAEAAEYGLID 200
Query: 292 KVLWR 296
KVL R
Sbjct: 201 KVLTR 205
>gi|386388774|ref|ZP_10073627.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
gi|385697288|gb|EIG27723.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
Length = 197
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 113/188 (60%), Gaps = 12/188 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 19 DIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ G A M LL+ G KGKRF +P+A++MI QP +
Sbjct: 70 VVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L + +A+H+G S E V R M ++ A E+G+ID
Sbjct: 130 RG--QATDIQIQAQEILKLKEMLTRKMAEHSGQSFEKVAADTERDNFMSAQEAMEYGLID 187
Query: 292 KVLW-RGQ 298
KVL RG+
Sbjct: 188 KVLTSRGE 195
>gi|238917377|ref|YP_002930894.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
gi|259585953|sp|C4Z1T6.1|CLPP_EUBE2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238872737|gb|ACR72447.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
Length = 193
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LVVA++++L+ DP I+ YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSANLVVAQMLFLEAEDPSKDIHFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC+V T+ +G A M LL+ G KGKR +P+A+IMI QP +
Sbjct: 70 SVSAGFAIYDTMQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +++ I A+ + R+ L ++LA +TG S E +++ R +M ++ A +G+ID
Sbjct: 130 RG--QETEIRIVAENILKTRNKLNEILAANTGKSVEEISRDTERDNYMTAQEAVAYGLID 187
Query: 292 KVLWR 296
V+ +
Sbjct: 188 SVVEK 192
>gi|443479146|ref|ZP_21068788.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
gi|443015411|gb|ELS30378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
Length = 198
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + +++ ++VA+L++L+ DP+ I+LYINS G G
Sbjct: 17 DIFSRLLRERIVFLGQQVDDSISNIIVAQLLFLEADDPEKDIFLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ VG A M LL G KGKR +PH +IMI QP +
Sbjct: 68 SVTAGMAIYDTMQHIRPDVSTICVGLAASMGAFLLTGGAKGKRLSLPHTRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L +L+A HTG + + + R + M AK +G+ID
Sbjct: 128 QG--QATDIEIQAKEILYHKSRLNELMAFHTGQPIDRIAEDTDRDFFMSPYEAKNYGLID 185
Query: 292 KVL 294
+V+
Sbjct: 186 EVV 188
>gi|427714259|ref|YP_007062883.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
gi|427378388|gb|AFY62340.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
Length = 198
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 11/189 (5%)
Query: 106 PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRD 165
P T D+ + L RI+++G + + +VA ++YL DP I LYINS G
Sbjct: 16 PYTQWIDIYNRLYRERIIFLGRDVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPG---- 71
Query: 166 DGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQ 225
G + G AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI
Sbjct: 72 -----GSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIH 126
Query: 226 QPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAK 285
QP + G A+D+ I A+E + R L L HTG E + K + R Y M ++ AK
Sbjct: 127 QPSGGTRG--QATDIEIEAREILRIRRQLNNLYVHHTGQVLEKIEKDMDRDYFMSAQEAK 184
Query: 286 EFGVIDKVL 294
++G+ID+V+
Sbjct: 185 DYGLIDRVI 193
>gi|56751593|ref|YP_172294.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|3023500|sp|O34125.1|CLPP2_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460442|sp|Q5N1P6.1|CLPP3_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|15620530|gb|AAL03914.1|U30252_2 ClpP2 [Synechococcus elongatus PCC 7942]
gi|2351823|gb|AAB68677.1| ATP-dependent Clp protease, proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686552|dbj|BAD79774.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
Length = 240
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + AV + +VA+L++L+ DP+ I LYINS G G
Sbjct: 53 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPG---------G 103
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q+ +V T+ G A M LL+ G +GKR +P A+IMI QP +
Sbjct: 104 SVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGA 163
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + ++ TL LLA+HTG E + R + M AK +G+ID
Sbjct: 164 QG--QAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLID 221
Query: 292 KVLWR 296
+VL R
Sbjct: 222 QVLTR 226
>gi|253577702|ref|ZP_04855005.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251842907|gb|EES70953.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + V ++A++++L DP+ IY YINS G G
Sbjct: 20 DIYSRLLKDRIVFLGSAIDDQVANSIMAQMLFLAAEDPEKDIYFYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +K +V T+ G A A +LL AG KGKRF +P+++IMI QP +
Sbjct: 71 STSAGFAIYDTMQYVKPDVQTICSGMAASFAAILLMAGAKGKRFALPNSEIMIHQPHGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A + R L + A+ TG E + K + R Y M + A+E+G+ID
Sbjct: 131 QG--QASDIAISANRILRTRAVLNTIAAECTGQPLERIEKDMDRDYFMSADEAREYGIID 188
Query: 292 KVL 294
+V+
Sbjct: 189 QVI 191
>gi|223040072|ref|ZP_03610353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
gi|222878658|gb|EEF13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
Length = 196
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + + +VA++++L+ DP IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGEIEDGIASAIVAQMLFLEAEDPDKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GF+IYDT+ +K +V T+ +G A M LL+ G +GKR+ +P+++IMI QP +
Sbjct: 71 VITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYALPNSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L +LAK+TG + K R + M S AKE+G+ID
Sbjct: 131 RG--QATDIEIQAKEILRMKEILNAILAKNTGQKLAKIQKDTDRDFFMSSAEAKEYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLEK 193
>gi|337744565|ref|YP_004638727.1| protein ClpP1 [Paenibacillus mucilaginosus KNP414]
gi|379718194|ref|YP_005310325.1| protein ClpP1 [Paenibacillus mucilaginosus 3016]
gi|386720758|ref|YP_006187083.1| protein ClpP1 [Paenibacillus mucilaginosus K02]
gi|336295754|gb|AEI38857.1| ClpP1 [Paenibacillus mucilaginosus KNP414]
gi|378566866|gb|AFC27176.1| ClpP1 [Paenibacillus mucilaginosus 3016]
gi|384087882|gb|AFH59318.1| protein ClpP1 [Paenibacillus mucilaginosus K02]
Length = 193
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A+L++L DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSGINDVVANSIIAQLLFLAASDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLAAG GKRF +P++++MI QP +
Sbjct: 70 SITSGMAIYDTMQFIKPDVSTICVGMAASMGAFLLAAGAPGKRFALPNSEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ IRAK + RD L +L++ TG S E + K R M + A+ +G+ID
Sbjct: 130 EG--QASDIEIRAKRILKMRDKLNTILSERTGQSFERIEKDTDRDNFMSAEEARAYGLID 187
Query: 292 KVLWR 296
KV+ +
Sbjct: 188 KVIEK 192
>gi|227824397|ref|ZP_03989229.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|352683492|ref|YP_004895475.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
gi|226904896|gb|EEH90814.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|350278145|gb|AEQ21335.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
Length = 199
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + L+VA+L++L+ DP I+LYINS G G
Sbjct: 22 DIYSRLLKDRIIFVTGEIEDHMANLIVAQLLFLESEDPDKDIHLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ +V T+ VG A MA +LLAAG KGKRF +PH+++MI QP +
Sbjct: 73 SVSAGLAIYDTMQYIRPDVSTICVGMAASMASILLAAGAKGKRFALPHSRVMIHQPLGGA 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ + ++LA HTG E + R +++ + A +G+ID
Sbjct: 133 QG--QATDIEIHAREILRVREEMNQILAAHTGKDPETIKLDTERDHYLTADEALSYGLID 190
Query: 292 KVL 294
+V+
Sbjct: 191 QVV 193
>gi|189485256|ref|YP_001956197.1| ATP-dependent Clp protease protease subunit P [uncultured Termite
group 1 bacterium phylotype Rs-D17]
gi|170287215|dbj|BAG13736.1| ATP-dependent Clp protease protease subunit P [uncultured Termite
group 1 bacterium phylotype Rs-D17]
Length = 203
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 110/187 (58%), Gaps = 13/187 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTE---LVVAELMYLQWMDPKAPIYLYINSTGTTRDDGE 168
DL S LL RI+++G T+ +++A+L+YL D I LYINS G
Sbjct: 21 DLYSRLLKDRIIFVGGQDGAVTTDSANVLIAQLLYLDSEDQGKDISLYINSPG------- 73
Query: 169 SVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPR 228
GM S G A+YDT+ +K + T+ +G A+ +LLAAGTKGKR+ + H++IMI QP
Sbjct: 74 --GMVSAGLAVYDTMQFIKSPITTICMGMAMSFGAVLLAAGTKGKRYALTHSRIMIHQPL 131
Query: 229 LPSSGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEF 287
+ GL SD+ I AKE + + L ++A+HTG + E V K R +M ++ AKE+
Sbjct: 132 IYGGGLSGTVSDIDIEAKELVSTKQKLSGIIAEHTGKTSERVLKDTDRNCYMSAQEAKEY 191
Query: 288 GVIDKVL 294
G+ID+V+
Sbjct: 192 GLIDEVI 198
>gi|20807119|ref|NP_622290.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
tengcongensis MB4]
gi|20515613|gb|AAM23894.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter
tengcongensis MB4]
Length = 198
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + LV+A++++L+ DP I+LYINS G G
Sbjct: 22 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A MA LLAAG KGKRF +P+++IMI QP
Sbjct: 73 SITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGM 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + RD L ++L+++TG E + + R Y M + AK +G+ID
Sbjct: 133 QG--QATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEAKTYGIID 190
Query: 292 KVLWR 296
+L R
Sbjct: 191 DILVR 195
>gi|67924586|ref|ZP_00518001.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416404722|ref|ZP_11687744.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67853560|gb|EAM48904.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357261483|gb|EHJ10747.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 202
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AGTKGKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L LA HT + + + R + M + A+E+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKGLLNNHLASHTEQPLDKIAEDTERDFFMSAEEAQEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVINR 190
>gi|307150040|ref|YP_003885424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306980268|gb|ADN12149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 203
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQEVTNDLANLIVAQLLFLESEDPDKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL AG KGKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLNAGAKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L + LA TG E + + R + M + AK++G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKGLLNQHLASRTGQPLEKIAEDTERDFFMSAEEAKDYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVINR 190
>gi|404379126|ref|ZP_10984194.1| ATP-dependent Clp protease proteolytic subunit [Simonsiella
muelleri ATCC 29453]
gi|294483471|gb|EFG31156.1| ATP-dependent Clp protease proteolytic subunit [Simonsiella
muelleri ATCC 29453]
Length = 206
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 112/190 (58%), Gaps = 11/190 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ LVVA+L++L+ +P IY YINS G G
Sbjct: 26 DIYSRLLKERIIFLVGPVNDHTANLVVAQLLFLESENPDKDIYFYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G +I+DT+ +K +V T+ +G A M LL+AG KGKRF +P+++IMI QP L S
Sbjct: 77 SVSAGMSIFDTMNFIKPDVQTLCLGQAASMGAFLLSAGAKGKRFALPNSRIMIHQP-LIS 135
Query: 232 SGL-LPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL ASD+ I A+E + ++ L LLAKHTG E + + R M ++ A E+G+I
Sbjct: 136 GGLGGQASDIEIHARELIKLKEKLNNLLAKHTGQPLEKIERDTDRDNFMSAQTAMEYGLI 195
Query: 291 DKVLWRGQET 300
DKV+ +E
Sbjct: 196 DKVITNREEV 205
>gi|334365682|ref|ZP_08514632.1| endopeptidase Clp [Alistipes sp. HGB5]
gi|390945732|ref|YP_006409492.1| protease subunit of ATP-dependent protease [Alistipes finegoldii
DSM 17242]
gi|313158115|gb|EFR57520.1| endopeptidase Clp [Alistipes sp. HGB5]
gi|390422301|gb|AFL76807.1| protease subunit of ATP-dependent protease [Alistipes finegoldii
DSM 17242]
Length = 222
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 122/232 (52%), Gaps = 17/232 (7%)
Query: 65 EAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVY 124
E + + +L D SP +E E + + D+ S L+ RI++
Sbjct: 5 EKYARKHCGISSLKLHDFQSVSGAYVSPTIIE------ERQLNIATMDVFSRLMMDRIIF 58
Query: 125 IGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLM 184
+G P+ ++ A+L++L+ +DP+ I +YINS G G S G IYDT+
Sbjct: 59 LGAPIYDDAANIIQAQLLFLESVDPEKDIQIYINSPG---------GSVSAGLGIYDTMQ 109
Query: 185 QMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRA 244
+ +V T+ G A M +LL AG KGKR +PH+++MI QP + G ASD+ I A
Sbjct: 110 LVNSDVATICTGLAASMGAVLLTAGAKGKRSALPHSRVMIHQPLGGAQG--QASDIEITA 167
Query: 245 KEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
+E M + L ++L+ H+G + + + K R Y + +R AKE+G+ID+VL +
Sbjct: 168 REIMKTKRELYEILSAHSGVALKKIEKDADRDYWLSAREAKEYGLIDEVLSK 219
>gi|325292625|ref|YP_004278489.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
gi|335035107|ref|ZP_08528450.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
gi|417860288|ref|ZP_12505344.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens F2]
gi|418406778|ref|ZP_12980097.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens 5A]
gi|325060478|gb|ADY64169.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
gi|333793538|gb|EGL64892.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
gi|338823352|gb|EGP57320.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens F2]
gi|358007271|gb|EHJ99594.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens 5A]
Length = 210
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ + LV A+L++L+ +PK I LYINS G G
Sbjct: 27 DIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKEIALYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ VG A M LLLAAG KG RF P+A+IM+ QP
Sbjct: 78 VVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNARIMVHQPSGGF 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ A++ + + L ++ KHTG + E V KT+ R + MD+ AK++GVID
Sbjct: 138 QG--QASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMDADEAKDWGVID 195
Query: 292 KVLWRGQE 299
K+L QE
Sbjct: 196 KILTSRQE 203
>gi|284044102|ref|YP_003394442.1| ATP-dependent Clp protease proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
gi|283948323|gb|ADB51067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
Length = 194
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+++G P+ + L+VA+L++L+ DP I +YINS G G
Sbjct: 20 DIYSRLLNERIIFLGTPVDDQIANLIVAQLLHLESEDPDKDISIYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ +K +V T+ VG A+ M LLL+ G +GKR +P+AKI+I Q + S
Sbjct: 71 SVYAGLAIYDTMQFIKPDVQTICVGIAMSMGALLLSGGARGKRMALPNAKILIHQ--VSS 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
S A+D+ I A+E + R L +++A H+G + V K R Y M S AK++G+ID
Sbjct: 129 SFQGQATDIEIHAREIIDIRRRLDEIIALHSGKPVDEVKKDTERDYFMSSEEAKDYGIID 188
Query: 292 KVLWR 296
+V+ +
Sbjct: 189 RVIAK 193
>gi|195645066|gb|ACG42001.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 302
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 11/194 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 93 DIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLKPVHLYINSPG---------G 143
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ +G A M LLLAAG G+R +P+A++MI QP +
Sbjct: 144 VVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGA 203
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ KHT + + + + R MD A+++G+ID
Sbjct: 204 QGQ--ATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPEEARDWGLID 261
Query: 292 KVLWRGQETIMAEV 305
+V+ + M +V
Sbjct: 262 EVIENRPASFMPDV 275
>gi|340758793|ref|ZP_08695375.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
gi|251836566|gb|EES65101.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
Length = 191
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 25/213 (11%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
SPT++ S + ER+ D+ S LL RI+++G + V +VA+L++L
Sbjct: 3 SPTVVESTGRSERA------------YDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP I +YINS G G+ + G AIYDT+ +K +V TV +G A M L
Sbjct: 51 EAEDPDKDIIMYINSPG---------GVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGAL 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGN 264
LL AG +GKR+ + H++IMI QP + G A+D+ I+AKE + ++ L ++LA TG
Sbjct: 102 LLGAGARGKRYALEHSRIMIHQPLGGARG--QATDIEIQAKEILRMKEMLSQILADCTGK 159
Query: 265 S-EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
S E +T T R Y M + AK +G+ID+V +
Sbjct: 160 SLSEIITDTERDNY-MSAEEAKNYGLIDQVFKK 191
>gi|153813468|ref|ZP_01966136.1| hypothetical protein RUMOBE_03888 [Ruminococcus obeum ATCC 29174]
gi|149830412|gb|EDM85504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus obeum ATCC 29174]
Length = 193
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASVIVAQLLFLEAEDPSKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ +G A M LLA GTKGKRF +PH+ IMI QP +
Sbjct: 70 SVTAGMAIYDTMKYIKCDVSTICLGMAASMGAFLLAGGTKGKRFALPHSTIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + TL ++LA++TG E V K R +M + AK +G+ID
Sbjct: 130 QG--QATEIQIVADHIAQTKRTLNEILAENTGQPYEVVEKDTDRDNYMTAEEAKAYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 GVV 190
>gi|88809170|ref|ZP_01124679.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787112|gb|EAR18270.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 200
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 105/174 (60%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + AV +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGSEVNDAVANSLVAQMLYLDSEDSGKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTIQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPHSRIMIHQP-LGGTAQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + ++ L + +A+ +G S E + K R Y + S+ A ++G+ID+V+
Sbjct: 141 EIEAREILRMKEMLNRSMAEMSGQSFEKIEKDTDRDYFLSSQEAMDYGLIDRVI 194
>gi|119357822|ref|YP_912466.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
gi|166201813|sp|A1BI15.1|CLPP_CHLPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119355171|gb|ABL66042.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
Length = 227
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L++A+L++L+ DP+ IY+Y+NS G G
Sbjct: 44 DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G IYDT+ ++ +V TV VG A M LLA+GTKGKR +PH++IMI QP +
Sbjct: 95 SVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGTKGKRASLPHSRIMIHQPSGGA 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G SD++I+A+E R L ++LA HTG + V + R M+++ A E+G+ID
Sbjct: 155 QG--QESDIIIQAREIEKIRRLLEEILASHTGKDVQQVREDSERDRWMNAQEALEYGIID 212
Query: 292 KVLWR 296
++ +
Sbjct: 213 QIFEK 217
>gi|166368459|ref|YP_001660732.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|390438071|ref|ZP_10226569.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|422301333|ref|ZP_16388701.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425436520|ref|ZP_18816955.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425442638|ref|ZP_18822879.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425447772|ref|ZP_18827754.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425450002|ref|ZP_18829834.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|425455950|ref|ZP_18835661.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|425462515|ref|ZP_18841989.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|425465071|ref|ZP_18844381.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|425470396|ref|ZP_18849266.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440753128|ref|ZP_20932331.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|443664109|ref|ZP_21133359.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
gi|159028168|emb|CAO89775.1| clpP [Microcystis aeruginosa PCC 7806]
gi|166090832|dbj|BAG05540.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|389678721|emb|CCH92424.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389716257|emb|CCH99490.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389731601|emb|CCI04366.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389769363|emb|CCI05782.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|389792301|emb|CCI11972.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389803100|emb|CCI17966.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389824416|emb|CCI26621.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|389832761|emb|CCI23365.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|389838471|emb|CCI30693.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389883997|emb|CCI35668.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440177621|gb|ELP56894.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|443331652|gb|ELS46298.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
Length = 199
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + +VA+++YL DP PIYLYINS G G + G AIY
Sbjct: 31 RILFLGQEVTDGLANALVAQMLYLDSEDPTKPIYLYINSPG---------GSVTAGMAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K EV T+ VG A M LLA+G+ GKR +PHA+IMI QP + +G A+D+
Sbjct: 82 DTMQYIKAEVVTICVGLAASMGAFLLASGSPGKRLALPHARIMIHQP-MGGTGRRQATDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I AKE + R L +++A TG + E + K R Y + + A +G+IDKV+
Sbjct: 141 DIEAKEILRIRQQLNEIMANRTGQTIERIEKDTDRDYFLSAEEAVAYGLIDKVV 194
>gi|78779795|ref|YP_397907.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9312]
gi|123969045|ref|YP_001009903.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. AS9601]
gi|126696838|ref|YP_001091724.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9301]
gi|157413876|ref|YP_001484742.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9215]
gi|254526963|ref|ZP_05139015.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
gi|115311346|sp|Q319H4.1|CLPP2_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78713294|gb|ABB50471.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
gi|123199155|gb|ABM70796.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126543881|gb|ABO18123.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|157388451|gb|ABV51156.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|221538387|gb|EEE40840.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
Length = 203
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGQEVNDGIANSLVAQMLYLDSDDNSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTIKYVKSDVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP-LGGTSQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I AKE + +D L +A TG S E + K R Y + + AK +G+ID+V+
Sbjct: 141 EIEAKEILRIKDMLNMSMADMTGQSFEKIEKDTDRDYFLSAEEAKNYGLIDRVI 194
>gi|166369013|ref|YP_001661286.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|390442513|ref|ZP_10230504.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|422303000|ref|ZP_16390356.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425435289|ref|ZP_18815746.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425439908|ref|ZP_18820220.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425452211|ref|ZP_18832029.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|425458445|ref|ZP_18837933.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|425472440|ref|ZP_18851281.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440754784|ref|ZP_20933986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|166091386|dbj|BAG06094.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|389680218|emb|CCH91098.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389719747|emb|CCH96448.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389766108|emb|CCI08183.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|389792060|emb|CCI12154.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389822691|emb|CCI29606.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|389834168|emb|CCI34630.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389881467|emb|CCI37973.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440174990|gb|ELP54359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 233
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L+YL+ DP+ I LYINS G G
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL G GKR +P ++IMI QP +
Sbjct: 98 SVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + + L +LA HTG + + R + M + AKE+G+ID
Sbjct: 158 QG--QASDIAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLID 215
Query: 292 KVLWR 296
V+ R
Sbjct: 216 LVISR 220
>gi|242309637|ref|ZP_04808792.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
pullorum MIT 98-5489]
gi|239523638|gb|EEQ63504.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
pullorum MIT 98-5489]
Length = 196
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 113/185 (61%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + + +VA+L++L+ DP+ IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGQIDDGIASSIVAQLLFLEAEDPQKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ +K ++ T+ +G A M LL+ GTKGKR+ +P+++IMI QP +
Sbjct: 71 VVTSGLSIYDTMNYIKPDICTICIGQAASMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + TL ++LA +T S E ++K R + M ++ AK++G+ID
Sbjct: 131 QG--QATDIEIQAKEILRLKATLNEILAANTNQSLEKISKDTDRDFFMSAQEAKKYGLID 188
Query: 292 KVLWR 296
VL +
Sbjct: 189 NVLTK 193
>gi|123966708|ref|YP_001011789.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123201074|gb|ABM72682.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 201
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGQEVNDGIANSLVAQMLYLDSDDNTKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LL AGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPHSRIMIHQP-LGGTSQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + +D L K +A TG S E + K R Y + + AK +G+ID+V+
Sbjct: 141 EIEAREILRIKDMLNKSMADMTGQSFEKIEKDTDRDYFLSAEEAKNYGLIDRVI 194
>gi|428224315|ref|YP_007108412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427984216|gb|AFY65360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 197
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + ++A ++YL DP I LYINS G G
Sbjct: 22 DIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIILYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
M + G AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP +
Sbjct: 73 MVTAGMAIYDTMQHVKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L + AK+TG E + K + R + M + AKE+G+ID
Sbjct: 133 RG--QATDIEIEAREILRIRQELNGIYAKNTGQPIEKIEKDMDRDFFMSAYEAKEYGLID 190
Query: 292 KVL 294
+V+
Sbjct: 191 RVI 193
>gi|331003803|ref|ZP_08327295.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
oral taxon 107 str. F0167]
gi|330411995|gb|EGG91392.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
oral taxon 107 str. F0167]
Length = 193
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 119/209 (56%), Gaps = 23/209 (11%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ S ++ ER+ D+ S LL RI+++G + LVVA++++L+
Sbjct: 5 PTVIESTSRGERAF------------DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
DP I LYINS G G G AIYDT+ +KC+V T+ +G A M L
Sbjct: 53 SEDPTKDINLYINSPG---------GSVVAGMAIYDTMQYVKCDVSTICMGMAASMGAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LA GTKGKR+ +P+A+IMI QP + G A+++ I A++ + ++ + K+LA++T
Sbjct: 104 LAGGTKGKRYALPNAEIMIHQPSGGAQG--QATEIRIAAEQILKTKEKMNKILAENTNRP 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
E + + R +M ++ A ++G+IDKV+
Sbjct: 162 IEVIERDTERDNYMSAKEALDYGIIDKVI 190
>gi|374307960|ref|YP_005054391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Filifactor
alocis ATCC 35896]
gi|374308266|ref|YP_005054697.1| hypothetical protein [Filifactor alocis ATCC 35896]
gi|320120411|gb|EFE27574.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Filifactor
alocis ATCC 35896]
gi|320120478|gb|ADW16163.1| hypothetical protein HMPREF0389_01718 [Filifactor alocis ATCC
35896]
Length = 196
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + LVVA++++L+ DP I YINS G G
Sbjct: 21 DIYSRLLKDRIIFLSDEVNDVTSSLVVAQMLFLEAEDPDKDIMFYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +KC+V T+ +G A M LLAAG KGKR+ +P+A++MI QP +
Sbjct: 72 SITSGMAIFDTMQYIKCDVCTICIGMAASMGAFLLAAGEKGKRYALPNAEVMIHQPLGGA 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+ + +D L +LA+ TG + E + R M + AKE+G+ID
Sbjct: 132 QG--QATDIQIQAERILKMKDKLNIILAERTGQNLETIKNDTERDNFMSAEEAKEYGLID 189
Query: 292 KVLWR 296
KV+ +
Sbjct: 190 KVIEK 194
>gi|408785974|ref|ZP_11197714.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium lupini
HPC(L)]
gi|424910122|ref|ZP_18333499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846153|gb|EJA98675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408488163|gb|EKJ96477.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium lupini
HPC(L)]
Length = 210
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ + LV A+L++L+ +PK I LYINS G G
Sbjct: 27 DIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKEIALYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ VG A M LLLAAG KG RF P+A+IM+ QP
Sbjct: 78 VVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNARIMVHQPSGGF 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ A++ + + L ++ KHTG + E V KT+ R + MD+ AK++GVID
Sbjct: 138 QG--QASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMDADEAKDWGVID 195
Query: 292 KVLWRGQE 299
K+L QE
Sbjct: 196 KILTSRQE 203
>gi|198433849|ref|XP_002124509.1| PREDICTED: similar to predicted protein isoform 1 [Ciona
intestinalis]
Length = 234
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + P+ V+ L+VA+L++LQ P+ PI +YIN+ G G
Sbjct: 53 DIYSRLLKERIVCLMAPVDDFVSGLIVAQLLFLQSESPQKPINMYINTPG---------G 103
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC V T VG A M LLLAAG G R +P+++IM+ QP +
Sbjct: 104 TVTSGLAIYDTMQLIKCPVSTWVVGQASSMGSLLLAAGEPGMRNALPNSRIMVHQPLGGA 163
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD++I+A E ++ L KL +HTG E + K + R MD AK FG+ID
Sbjct: 164 SG--QASDIVIQANEIKKVKEKLNKLYVQHTGQEYEVIEKALDRDNFMDPYEAKLFGLID 221
Query: 292 KVL 294
VL
Sbjct: 222 NVL 224
>gi|390957233|ref|YP_006420990.1| ATP-dependent Clp protease proteolytic subunit ClpP [Terriglobus
roseus DSM 18391]
gi|390412151|gb|AFL87655.1| ATP-dependent Clp protease proteolytic subunit ClpP [Terriglobus
roseus DSM 18391]
Length = 198
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 110/186 (59%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL I+++G P+ V L++A+L++L DP I LYINS G G
Sbjct: 19 DIYSRLLRDNIIFLGTPIDDNVANLIIAQLLFLSGEDPDKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A M LL AG KGKR +P+++I+I QP +
Sbjct: 70 SVSAGMAIYDTMQYIKNDVSTLCIGQAASMGAFLLMAGKKGKRLALPNSRILIHQPLIMG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ A+++ I A+E + R+ + K++A HTG + + + + R + M + +AK++G+I
Sbjct: 130 HGIQGQATEIDIHAREILRLRERMNKIMADHTGQTFDQIERDTDRDFTMGAEQAKDYGLI 189
Query: 291 DKVLWR 296
D ++ R
Sbjct: 190 DDIISR 195
>gi|282900572|ref|ZP_06308514.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194372|gb|EFA69327.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 194
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL L RI+++ + + +VA L+YL D PIYLYINS G G
Sbjct: 22 DLEDRLFRERIIFLTEEVDDGIANAIVAYLLYLDSDDQTKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K EV T+ VG A M LLAAG KGKR +PH++IMI QP +
Sbjct: 73 SVTAGMAIYDTIQYIKSEVVTICVGLAASMGSFLLAAGAKGKRLALPHSRIMIHQPSGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R L ++ A +TG + K + R + M ++ AKE+G+ID
Sbjct: 133 RG--QASDIEIEAREILRIRHQLNQIYADNTGQVLSKIEKDMDRDFFMSAQEAKEYGLID 190
Query: 292 KVL 294
+V+
Sbjct: 191 RVI 193
>gi|443660052|ref|ZP_21132510.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159030460|emb|CAO91362.1| clpP2 [Microcystis aeruginosa PCC 7806]
gi|443332568|gb|ELS47168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 233
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L+YL+ DP+ I LYINS G G
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL G GKR +P ++IMI QP +
Sbjct: 98 SVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+AKE + + L +LA HTG + + R + M + AKE+G+ID
Sbjct: 158 QG--QASDIAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLID 215
Query: 292 KVLWR 296
V+ R
Sbjct: 216 LVISR 220
>gi|237653230|ref|YP_002889544.1| ATP-dependent Clp protease proteolytic subunit [Thauera sp. MZ1T]
gi|237624477|gb|ACR01167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thauera sp.
MZ1T]
Length = 212
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R+V++ P+ L+VA+L++L+ +P IY YINS G G
Sbjct: 35 DIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIYFYINSPG---------G 85
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K V T+ +G A M LLAAG KGKRF++P++++MI QP
Sbjct: 86 SVTAGMAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFILPNSRVMIHQPLGGF 145
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R L +L+KHTG + E + K R M + A E+G++D
Sbjct: 146 QG--QASDIEIHAREILYLRSRLNDMLSKHTGQALERIEKDTDRDNFMSATAAVEYGLVD 203
Query: 292 KVLWRGQET 300
KVL +T
Sbjct: 204 KVLTSRDDT 212
>gi|212640342|ref|YP_002316862.1| ATP-dependent Clp protease proteolytic subunit [Anoxybacillus
flavithermus WK1]
gi|433447199|ref|ZP_20410832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anoxybacillus
flavithermus TNO-09.006]
gi|226706440|sp|B7GL34.1|CLPP_ANOFW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|212561822|gb|ACJ34877.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Anoxybacillus flavithermus WK1]
gi|432000033|gb|ELK20939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anoxybacillus
flavithermus TNO-09.006]
Length = 196
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ V +V++L++L DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP
Sbjct: 70 SITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGV 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + RD L ++L+++TG E + + R M + +AKE+G+ID
Sbjct: 130 QG--QATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEYGLID 187
Query: 292 KVLWRGQE 299
+VL R E
Sbjct: 188 RVLTRVDE 195
>gi|224373739|ref|YP_002608111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
gi|223589486|gb|ACM93222.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
Length = 196
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + V+ ++VA++++L+ +P+ IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLQGEINDHVSSIIVAQMLFLEAENPEKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LL++G KGKRF +PHA+IMI QP +
Sbjct: 71 VVTSGMAIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGKRFALPHARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + + L K+LA++TG S + + R + M + A ++G+ID
Sbjct: 131 QG--QATDIEIHAKEILRMKKELNKILAENTGQSVRKIERDTERDFFMSAEEAMKYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLKK 193
>gi|452204950|ref|YP_007485079.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
mccartyi BTF08]
gi|452112006|gb|AGG07737.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
mccartyi BTF08]
Length = 200
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ SLLL RI+++G + V LV+A+L++L DP I LYI+S G G
Sbjct: 23 DIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G A+YDT+ ++ +V T+ VG A MA +LL AG KGKR+ +P+A I + Q +
Sbjct: 74 VISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIHMHQAMGGA 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E M +D L +L KHTG E + R Y++ +++A E+G+ID
Sbjct: 134 QG--QASDIEIAAREIMRQQDILRNILVKHTGQPMEKIVHDSDRDYYLSAQQAVEYGLID 191
Query: 292 KVLWR 296
++L +
Sbjct: 192 EILQK 196
>gi|15888588|ref|NP_354269.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
gi|21759066|sp|Q8UFY6.1|CLPP2_AGRT5 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|15156306|gb|AAK87054.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
Length = 210
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ + LV A+L++L+ +PK I LYINS G G
Sbjct: 27 DIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKEIALYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ VG A M LLLAAG KG RF P+A+IM+ QP
Sbjct: 78 VVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNARIMVHQPSGGF 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ A++ + + L ++ KHTG + E V KT+ R + MD+ AK++GVID
Sbjct: 138 QG--QASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMDADEAKDWGVID 195
Query: 292 KVLWRGQE 299
K+L QE
Sbjct: 196 KILTSRQE 203
>gi|313207344|ref|YP_004046521.1| endopeptidase clp [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|383484714|ref|YP_005393626.1| endopeptidase clp [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|386320654|ref|YP_006016816.1| Protease subunit of ATP-dependent Clp proteases [Riemerella
anatipestifer RA-GD]
gi|416110316|ref|ZP_11591931.1| ATP-dependent Clp protease proteolytic subunit [Riemerella
anatipestifer RA-YM]
gi|442315388|ref|YP_007356691.1| Protease subunit of ATP-dependent Clp protease [Riemerella
anatipestifer RA-CH-2]
gi|312446660|gb|ADQ83015.1| Endopeptidase Clp [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|315023239|gb|EFT36249.1| ATP-dependent Clp protease proteolytic subunit [Riemerella
anatipestifer RA-YM]
gi|325335197|gb|ADZ11471.1| Protease subunit of ATP-dependent Clp proteases [Riemerella
anatipestifer RA-GD]
gi|380459399|gb|AFD55083.1| endopeptidase clp [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|441484311|gb|AGC40997.1| Protease subunit of ATP-dependent Clp protease [Riemerella
anatipestifer RA-CH-2]
Length = 224
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 110/194 (56%), Gaps = 11/194 (5%)
Query: 103 EHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGT 162
E R + D+ S L+ RI+++G + V +V A+L++L+ DP I +YINS G
Sbjct: 41 ERRMNVAQMDVFSRLMMDRIIFLGTGIDDQVANIVTAQLLFLESADPTKDIQIYINSPG- 99
Query: 163 TRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKI 222
G G IYDT+ +K +V T+ G A M +LL AG KGKR + H+++
Sbjct: 100 --------GSVYAGLGIYDTMQIIKPDVATICTGMAASMGAVLLVAGEKGKRSALKHSRV 151
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
MI QP + G+ ASD+ I +E + + L ++++H+G S E+V K+ R Y M S
Sbjct: 152 MIHQPSGGAQGV--ASDMEINLREMLKLKKELYDIISEHSGQSYEWVEKSSDRDYWMTSE 209
Query: 283 RAKEFGVIDKVLWR 296
AKEFG+ID+VL R
Sbjct: 210 EAKEFGMIDEVLAR 223
>gi|374619902|ref|ZP_09692436.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HIMB55]
gi|374303129|gb|EHQ57313.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HIMB55]
Length = 205
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R+++I P+ + LVVA+L++L+ +P I++YINS G G
Sbjct: 31 DIYSRLLKERVIFIVGPIEDQMANLVVAQLLFLESENPDKDIHIYINSPG---------G 81
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +IYDT+ +K EV T+ +G A M LL+ GTKGKR ++P+A+ MI QP +
Sbjct: 82 SVTAGLSIYDTMQFIKPEVSTMCLGQAASMGAFLLSGGTKGKRLILPNARTMIHQPSGGA 141
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R+ L +LLA HTG S + + + R M + ++ E+G++D
Sbjct: 142 QG--QATDIEIQAKEILFLRERLNRLLADHTGQSLDVIEQDTERDRFMSAEQSVEYGLVD 199
Query: 292 KVL 294
+V+
Sbjct: 200 QVI 202
>gi|261404070|ref|YP_003240311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|329927993|ref|ZP_08281997.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261280533|gb|ACX62504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|328938097|gb|EGG34494.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 198
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A++++L DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ VG A M LL AG KGKR+ +P+++IMI QP +
Sbjct: 70 SITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L ++L++ TG E + K R Y M + AKE+G+ID
Sbjct: 130 QG--QATDIEIRARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFMTADEAKEYGLID 187
Query: 292 KVL 294
+VL
Sbjct: 188 QVL 190
>gi|390442096|ref|ZP_10230114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|425439844|ref|ZP_18820158.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425471167|ref|ZP_18850027.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|389719848|emb|CCH96383.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389834540|emb|CCI34240.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389882956|emb|CCI36590.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
Length = 200
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AG GKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L + LA HTG + + + R + M + A ++G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALDYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|350572241|ref|ZP_08940546.1| ATP-dependent Clp protease, protease subunit [Neisseria wadsworthii
9715]
gi|349790497|gb|EGZ44406.1| ATP-dependent Clp protease, protease subunit [Neisseria wadsworthii
9715]
Length = 212
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ P+ LVVA++++L+ +P IY YINS G G
Sbjct: 26 DIYSRLLKERIVFLVGPVNDHTANLVVAQMLFLESENPDKDIYFYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +I+DT+ +K +V T+ +G A M LL+AGTKGKRF +P+++IMI QP L S
Sbjct: 77 SVTAGMSIFDTMNFVKPDVSTLCLGQAASMGAFLLSAGTKGKRFALPNSRIMIHQP-LIS 135
Query: 232 SGL-LPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL ASD+ I A+E + ++ L LAKHTG E V + R M + AKE+G+I
Sbjct: 136 GGLGGQASDIEIHARELIKIKEKLNYFLAKHTGQPLEKVERDTDRDNFMSAEAAKEYGLI 195
Query: 291 DKVLWRGQETIMA 303
D+V+ ++ + A
Sbjct: 196 DQVIENREDAVKA 208
>gi|78357263|ref|YP_388712.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
alaskensis G20]
gi|90101407|sp|Q30Z79.1|CLPP_DESDG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78219668|gb|ABB39017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
alaskensis G20]
Length = 200
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ V L+ A+L++L+ +P+ IYLYINS G G
Sbjct: 18 DIYSRLLKDRIILLGTPVDDNVASLICAQLLFLESENPEKEIYLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ + V T+ +G A M LLAAG G RF +P+++IMI QP +
Sbjct: 69 VVTAGLAIYDTMQYISAPVATLCMGQAASMGAFLLAAGQPGMRFALPNSRIMIHQPMGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + +D L ++L++HTG E + + R Y M AK FG+ID
Sbjct: 129 QG--QATDIDIQAREILRLKDRLNEILSRHTGQPLEKIVEHTDRDYFMGPENAKNFGIID 186
Query: 292 KVL 294
++L
Sbjct: 187 RIL 189
>gi|409990518|ref|ZP_11273881.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
gi|291569210|dbj|BAI91482.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938615|gb|EKN79916.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
Length = 198
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++ + + +VA ++YL DP PIYLYINS G G + G
Sbjct: 27 LFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPSKPIYLYINSPG---------GSVTAG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K +V T+ VG A M LLAAGTKGKR +P+A+IMI QP + G
Sbjct: 78 MAIYDTMQYIKSDVVTICVGMAASMGAFLLAAGTKGKRLALPNARIMIHQPLGGTRG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I AKE + R L ++LA+ +G + E + K R Y M + A E+G+ID+V+
Sbjct: 136 ATDIEIEAKEILRIRKVLNEMLAERSGQTLEKIEKDTDRDYFMSAAEAHEYGLIDQVI 193
>gi|375106291|ref|ZP_09752552.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium JOSHI_001]
gi|374667022|gb|EHR71807.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium JOSHI_001]
Length = 202
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ A LVVA+L++L+ +P I LYINS G G
Sbjct: 27 DIYSRLLRERIIFLVGPVNDATANLVVAQLLFLESENPDKEISLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G +I+DT+ +K EV T+ +G A M LL AG KGKRF +P++KIMI QP +
Sbjct: 78 SVSAGMSIFDTMQFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFALPNSKIMIHQPSGGA 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ L K+ A+ TG + E + + R ++M+ A E+G+ID
Sbjct: 138 QG--QATDIEIHAREILKTREQLNKIYAERTGQTLEKIQADMERDFYMNPVEALEYGLID 195
Query: 292 KVLWR 296
KVL +
Sbjct: 196 KVLEK 200
>gi|296536161|ref|ZP_06898289.1| endopeptidase Clp [Roseomonas cervicalis ATCC 49957]
gi|296263532|gb|EFH10029.1| endopeptidase Clp [Roseomonas cervicalis ATCC 49957]
Length = 213
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 109/184 (59%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ ++ L+ A+L++L+ +P I YINS G G
Sbjct: 29 DIYSRLLKERIIFLTGPVYDQMSSLICAQLLFLESENPNKDIAFYINSPG---------G 79
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G A+YDT+ ++ V TV +G A M LLL AG KGKRF +P+++IM+ QP +
Sbjct: 80 VVSAGLAMYDTMQYIRAPVSTVCLGMAASMGSLLLTAGAKGKRFALPNSRIMVHQPSGGA 139
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + R L ++ KHTG E + + + R +M + AKEFG+ID
Sbjct: 140 QG--QATDIEIQAREILALRKRLNQIYVKHTGQPIEEIERKLERDSYMSAEEAKEFGLID 197
Query: 292 KVLW 295
+V+
Sbjct: 198 EVVL 201
>gi|418324661|ref|ZP_12935892.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
gi|365225160|gb|EHM66411.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
Length = 194
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDADKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +K +V T+ VG A M LLAAG KGKR+ +P+A++MI QP +
Sbjct: 70 SVSAGFAIYDTIQHIKPDVQTICVGMAASMGSFLLAAGAKGKRYALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R L K+LA+ TG S + + K R + + AK++G+ID
Sbjct: 130 QG--QATEIEIAANHILKTRAKLNKILAERTGQSIDQIEKDTDRDNFLSADEAKDYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|418055593|ref|ZP_12693647.1| ATP-dependent Clp protease proteolytic subunit [Hyphomicrobium
denitrificans 1NES1]
gi|353209871|gb|EHB75273.1| ATP-dependent Clp protease proteolytic subunit [Hyphomicrobium
denitrificans 1NES1]
Length = 217
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 115/201 (57%), Gaps = 13/201 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DLPS LL RI+++ P+ + + +L++L+ +PK I +YINS G G
Sbjct: 28 DLPSRLLKERIIFVTGPVEDHMAASICMQLLFLESENPKKEISMYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LLL AG KG RF +P+A+IM+ QP
Sbjct: 79 VVTAGMAIYDTMQFVKPPVATLCIGQAASMGSLLLCAGEKGMRFALPNARIMVHQPSGGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ A++ + + L + KHTG S E + KT+ R Y M + +A++FG+ID
Sbjct: 139 SG--QASDIERHAEDIIKMKRRLNETYVKHTGQSYEVIEKTLDRDYFMTADQARDFGIID 196
Query: 292 KVLWRGQETIMA--EVAPPEE 310
KVL E +A E+ P E
Sbjct: 197 KVLESRDEVEVAALEIKAPAE 217
>gi|397905705|ref|ZP_10506547.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
gi|397161224|emb|CCJ33882.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
Length = 196
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + LV+A+L++L+ DP IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLGDEINDQTANLVIAQLLFLESEDPDKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ +K +V T+ VG A MA +LLAAG KGKRF +P+++IMI QP +
Sbjct: 70 VISAGLAIYDTMQYIKPDVSTICVGMAASMAAVLLAAGAKGKRFALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + + L ++L++ TG E + K R M + AKE+G+ID
Sbjct: 130 RG--QATDIAIHAEHILKLKKRLNEILSERTGQPIERIEKDTDRDNFMTALEAKEYGLID 187
Query: 292 KVLWR 296
V+ +
Sbjct: 188 DVITK 192
>gi|340787626|ref|YP_004753091.1| ATP-dependent Clp protease proteolytic subunit [Collimonas
fungivorans Ter331]
gi|340552893|gb|AEK62268.1| ATP-dependent Clp protease proteolytic subunit [Collimonas
fungivorans Ter331]
Length = 208
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ LVVA+L++L+ +P I LYINS G G
Sbjct: 33 DIYSRLLRERIIFLVGPVNDQTANLVVAQLLFLESENPDKDISLYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K E+ T+ G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 84 SVSAGMAIYDTMQFVKPEISTLCTGMAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGA 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R+ L +LA TG S E ++K R M + A E+G+ID
Sbjct: 144 QG--QASDIEIQAREILYLRERLNGILADKTGRSIEQISKDTDRDNFMSADAAVEYGLID 201
Query: 292 KVL 294
KVL
Sbjct: 202 KVL 204
>gi|425449262|ref|ZP_18829103.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|440753940|ref|ZP_20933142.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|389764138|emb|CCI09472.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|440174146|gb|ELP53515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 200
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AG GKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L + LA HTG + + + R + M + A ++G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALDYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|395762551|ref|ZP_10443220.1| ATP-dependent Clp protease proteolytic subunit [Janthinobacterium
lividum PAMC 25724]
Length = 205
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ + LVVA+L++L+ +P+ I LYINS G G
Sbjct: 30 DIYSRLLKERLIFMVGPVNDQMANLVVAQLLFLESENPEKEISLYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ G A M LLAAG KGKRF +P+++IMI QP S
Sbjct: 81 SVSAGMAIYDTMQFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLPNSRIMIHQPSGGS 140
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G+ ASD+ I+A+E + R L ++A+ TG S E + K R M + A E+G+ID
Sbjct: 141 QGM--ASDIEIQAREILYLRTRLNGIMAERTGQSIEQIAKDTDRDRFMSADEAVEYGLID 198
Query: 292 KVL 294
KVL
Sbjct: 199 KVL 201
>gi|385784973|ref|YP_005761146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis N920143]
gi|339895229|emb|CCB54551.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus lugdunensis N920143]
Length = 195
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDFEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++LA+ TG S E + K R + + AK +G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILAERTGQSIEQIQKDTDRDNFLTAEEAKAYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|241888864|ref|ZP_04776170.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella
haemolysans ATCC 10379]
gi|241864540|gb|EER68916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella
haemolysans ATCC 10379]
Length = 215
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 117/210 (55%), Gaps = 23/210 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ +Q ER+ D+ S LL RI+ +G + V + ++L++L+
Sbjct: 5 PTVIEQTSQGERAY------------DIYSRLLKDRIIILGSDVNDQVANSITSQLLFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
D + IY YINS G G + GFAIYDT+ +KC+V T+ +G A M L
Sbjct: 53 AQDSEKDIYFYINSPG---------GSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LAAGT GKR+ +P+A++MI QP + G A+++ I A+ + R+ L K+LA TG +
Sbjct: 104 LAAGTIGKRYALPNAEVMIHQPLGGAQG--QATEIEIAARHILRTREKLNKILADRTGQT 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLW 295
+ + + R ++ + A E+G++DKV++
Sbjct: 162 IKTIERDTERDNYLTAEEACEYGLVDKVMY 191
>gi|254514393|ref|ZP_05126454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR5-3]
gi|219676636|gb|EED33001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR5-3]
Length = 213
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R+V++ + + L+VA+L++L+ +P I+LYINS G G
Sbjct: 33 DIYSRLLKERVVFVVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +IYDT+ +K ++ T+ +G A M LL+ GTKGKR+ +P+A+ MI QP +
Sbjct: 84 SVTAGLSIYDTMQFIKPDISTMCLGQAASMGAFLLSGGTKGKRYCLPNARTMIHQPSGGA 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE ++ R+ L +L+A+HTG E + + R MD+ ++KE+G++D
Sbjct: 144 QG--QATDIDIQAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRFMDAEQSKEYGLVD 201
Query: 292 KVL 294
+V+
Sbjct: 202 EVV 204
>gi|282896316|ref|ZP_06304338.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198812|gb|EFA73691.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 194
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL L RI+++ + + +VA L+YL D PIYLYINS G G
Sbjct: 22 DLEDRLFRERIIFLTEEVDDGIANAIVAYLLYLDSDDQTKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K EV T+ VG A M LLAAG KGKR +PH++IMI QP +
Sbjct: 73 SVTAGMAIYDTIQYIKSEVITICVGLAASMGSFLLAAGAKGKRLALPHSRIMIHQPSGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R L ++ A +TG + K + R + M ++ AKE+G+ID
Sbjct: 133 RG--QASDIEIEAREILRIRHQLNQIYADNTGQVLSKIEKDMDRDFFMSAQEAKEYGLID 190
Query: 292 KVL 294
+V+
Sbjct: 191 RVI 193
>gi|422304551|ref|ZP_16391894.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425437033|ref|ZP_18817461.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425446784|ref|ZP_18826783.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425455241|ref|ZP_18834961.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|425462698|ref|ZP_18842165.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|443653952|ref|ZP_21131195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159028981|emb|CAO87442.1| clpP1 [Microcystis aeruginosa PCC 7806]
gi|389678071|emb|CCH93046.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389732839|emb|CCI03287.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389790315|emb|CCI13820.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389803899|emb|CCI17216.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389824204|emb|CCI27015.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|443333933|gb|ELS48469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 199
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AG GKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L + LA HTG + + + R + M + A ++G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALDYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|75906770|ref|YP_321066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|110816454|sp|Q3MFR5.1|CLPP1_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|75700495|gb|ABA20171.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 204
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + L+VA+L++L DP+ IYLYINS G G
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AGTKGKR +PH++IMI QP +
Sbjct: 69 SVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L LA+HTG E + + R + M A+++G+ID
Sbjct: 129 QG--QATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLID 186
Query: 292 KVLWR 296
+V+ R
Sbjct: 187 QVIDR 191
>gi|345874540|ref|ZP_08826351.1| endopeptidase [Neisseria weaveri LMG 5135]
gi|417957883|ref|ZP_12600801.1| endopeptidase [Neisseria weaveri ATCC 51223]
gi|343967629|gb|EGV35872.1| endopeptidase [Neisseria weaveri ATCC 51223]
gi|343970451|gb|EGV38628.1| endopeptidase [Neisseria weaveri LMG 5135]
Length = 207
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 113/184 (61%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ LVVA+L++L+ +P I+LYINS G G
Sbjct: 26 DIYSRLLKERIIFLVGPVNDQTANLVVAQLLFLESENPDKDIFLYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +IYDT+ +K +V T+ +G A M LL+AGTKGKRF +P+++IMI QP L S
Sbjct: 77 SVTAGMSIYDTMKFIKPDVSTLCLGQAASMGAFLLSAGTKGKRFALPNSRIMIHQP-LIS 135
Query: 232 SGL-LPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL ASD+ I A+E + ++ L +LLA+H+G V + R +M + A+E+G+I
Sbjct: 136 GGLGGQASDIEIHARELIKIKEKLNRLLAEHSGQDLAKVERDTDRDNYMSADEAQEYGLI 195
Query: 291 DKVL 294
D+VL
Sbjct: 196 DQVL 199
>gi|226529931|ref|NP_001141255.1| uncharacterized protein LOC100273342 [Zea mays]
gi|194703568|gb|ACF85868.1| unknown [Zea mays]
Length = 304
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 93 DIFSRLLKERIVCINGPIADDTASLVVAQLLFLESENPLKPVHLYINSPG---------G 143
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ +G A M LLLAAG G+R +P+A++MI QP +
Sbjct: 144 VVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGA 203
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ KHT + + + + R MD A+++G+ID
Sbjct: 204 QGQ--ATDIAIQAKEILKLRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPDEARDWGLID 261
Query: 292 KVL 294
+V+
Sbjct: 262 EVI 264
>gi|166363928|ref|YP_001656201.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|425467657|ref|ZP_18846936.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|166086301|dbj|BAG01009.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|389829532|emb|CCI29086.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
Length = 200
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q++ +V T+ +G A M LL+AG GKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L + LA HTG + + + R + M + A ++G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKQLLNEHLASHTGKPLDLIAEDTERDFFMSAEEALDYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|425790911|ref|YP_007018828.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik86]
gi|425629226|gb|AFX89766.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik86]
Length = 195
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 70 VITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + L +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 130 QG--QASDIEIISNEILRLKSLLNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLEK 192
>gi|407452949|ref|YP_006724674.1| protease subunit of ATP-dependent Clp protease [Riemerella
anatipestifer RA-CH-1]
gi|403313933|gb|AFR36774.1| Protease subunit of ATP-dependent Clp protease [Riemerella
anatipestifer RA-CH-1]
Length = 224
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 110/194 (56%), Gaps = 11/194 (5%)
Query: 103 EHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGT 162
E R + D+ S L+ RI+++G + V +V A+L++L+ DP I +YINS G
Sbjct: 41 ERRMNVAQMDVFSRLMMDRIIFLGTGIDDQVANIVTAQLLFLESADPAKDIQIYINSPG- 99
Query: 163 TRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKI 222
G G IYDT+ +K +V T+ G A M +LL AG KGKR + H+++
Sbjct: 100 --------GSVYAGLGIYDTMQIIKPDVATICTGMAASMGAVLLVAGEKGKRSALKHSRV 151
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
MI QP + G+ ASD+ I +E + + L ++++H+G S E+V K+ R Y M S
Sbjct: 152 MIHQPSGGAQGV--ASDMEINLREMLKLKKELYDIISEHSGQSYEWVEKSSDRDYWMTSE 209
Query: 283 RAKEFGVIDKVLWR 296
AKEFG+ID+VL R
Sbjct: 210 EAKEFGMIDEVLAR 223
>gi|417001829|ref|ZP_11941334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus prevotii ACS-065-V-Col13]
gi|325479715|gb|EGC82805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 197
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + ++++++A+L++L+ DP I YINS G G
Sbjct: 23 DIYSRLLKDRIIFLSGEVRDEISDIIIAQLLFLESEDPDKDIQFYINSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A MA +LL++G KGKRF +P + IMI QP +
Sbjct: 74 VVTSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRFSLPSSNIMIHQPSGGA 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD++I+A++ + ++ L K+L+ +TG S + + K R + M + A E+G+ID
Sbjct: 134 QG--QASDIVIQAEQIIKIKERLNKILSDNTGQSLKKIEKDTDRDFAMSAAEALEYGLID 191
Query: 292 KVL 294
KV+
Sbjct: 192 KVI 194
>gi|85859380|ref|YP_461582.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
gi|108935920|sp|Q2LTK5.1|CLPP_SYNAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85722471|gb|ABC77414.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
Length = 194
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V L++A+L++L+ DP I+ Y+N+ G G
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K V TV VG A M LLLAAG +GKR +PH++I+I QP
Sbjct: 70 HISSGMAIYDTMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRILIHQPLGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + +D L +LA T + + R Y+M S++AKE+G+ID
Sbjct: 130 QG--QATDIDIQAREILRLKDELSLILADLTNQPLDRIKTDTERDYYMTSQQAKEYGIID 187
Query: 292 KVLWR 296
+++ +
Sbjct: 188 EIIVK 192
>gi|194476565|ref|YP_002048744.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
gi|171191572|gb|ACB42534.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
Length = 219
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 117/196 (59%), Gaps = 15/196 (7%)
Query: 111 PDLPSLLLHGRIVYIGMPLVP------------AVTELVVAELMYLQWMDPKAPIYLYIN 158
DL S+LL RI+Y+GM L VT+L++A+L+ L++ + + I +YIN
Sbjct: 24 SDLASILLSERIIYLGMALASDDETRQSFSLGMNVTQLMIAQLLCLEF-ESNSAITIYIN 82
Query: 159 STGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMP 218
STG+T + ++G E+E FAIYDT+ ++ VHT VG A+G A +LLA G G R +P
Sbjct: 83 STGSTDINSNAIGHETEAFAIYDTIRFIESPVHTFCVGVAMGTATMLLACGASGCRASLP 142
Query: 219 HAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYH 278
+A I++ QP G ++D+ I+ ++ +++R + ++L+ H G S + + R +H
Sbjct: 143 NASIILNQPYNYVGG--SSTDINIQVEQLLLSRSIMHEILSIHIGKSLQQIRSDCNRIHH 200
Query: 279 MDSRRAKEFGVIDKVL 294
+ + +A +G+ID V+
Sbjct: 201 LTAYQALHYGIIDDVI 216
>gi|119493580|ref|ZP_01624244.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452570|gb|EAW33753.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 198
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA ++YL DP PIYLYINS G G
Sbjct: 22 DIYTRLNQERIIFLGQEVTDGLANRIVASMLYLDSDDPNKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LLA+GT GKR +PHA+IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKSDVVTICVGLAASMGAFLLASGTPGKRLALPHARIMIHQPMGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R L +LA+ S E V K R Y + + A+E+G++D
Sbjct: 133 RG--QASDIEIEAREILRIRSLLNSILAERAHQSIEKVEKDTDRDYFLSAEEAREYGLVD 190
Query: 292 KVL 294
+V+
Sbjct: 191 QVI 193
>gi|15616126|ref|NP_244431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|11386690|sp|Q9K709.1|CLPP1_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|10176188|dbj|BAB07283.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +VA+L++LQ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K V T+ +G A M LLAAG KGKRF +P++++MI QP +
Sbjct: 70 SITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + + R+TL ++LA+ TG E + K R M + +A+E+G+ID
Sbjct: 130 RG--QASDIEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVI 190
>gi|357053908|ref|ZP_09115000.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
clostridioforme 2_1_49FAA]
gi|355385534|gb|EHG32586.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
clostridioforme 2_1_49FAA]
Length = 196
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + L++A++++L+ DP+ I LYINS G G
Sbjct: 19 DIFSRLLSDRIVFLGEEVSDVSASLIIAQMLFLEAQDPEKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +KC+V T+ +G A LLA G KGKR +P+A+IMI QP +
Sbjct: 70 SVSAGFAIYDTMQYIKCDVSTICIGLAASFGAFLLAGGAKGKRIALPNAEIMIHQPAIHG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+G+ A+D+ I + ++ L +LA++TG S + R +M + A FG+I
Sbjct: 130 NGIQGQATDIKITSDHIQKSKKRLNTILAENTGKSIDEAAIATERDNYMTAEEAMNFGLI 189
Query: 291 DKVLWR 296
DK++ R
Sbjct: 190 DKIIDR 195
>gi|88705172|ref|ZP_01102884.1| ATP-dependent Clp protease, proteolytic subunit [Congregibacter
litoralis KT71]
gi|88700867|gb|EAQ97974.1| ATP-dependent Clp protease, proteolytic subunit [Congregibacter
litoralis KT71]
Length = 206
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R+V++ + + L+VA+L++L+ +P I+LYINS G G
Sbjct: 26 DIYSRLLKERVVFVVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +IYDT+ +K ++ T+ +G A M LL+ GTKGKR+ +P+A+ MI QP +
Sbjct: 77 SVTAGLSIYDTMQFIKPDISTMCLGQAASMGAFLLSGGTKGKRYCLPNARTMIHQPSGGA 136
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE ++ R+ L +L+A+HTG E + + R MD+ ++KE+G++D
Sbjct: 137 QG--QATDIDIQAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRFMDAEQSKEYGLVD 194
Query: 292 KVL 294
+V+
Sbjct: 195 EVV 197
>gi|87125532|ref|ZP_01081377.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
RS9917]
gi|86166832|gb|EAQ68094.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
RS9917]
Length = 200
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGQEVNDGIANSLVAQMLYLDSDDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTMQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPHSRIMIHQP-LGGTAQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A E + ++ L + +A TG S E + K R Y + + AK++G+ID+V+
Sbjct: 141 EIEANEILRIKEMLNRSMAAMTGKSFETIEKDTDRDYFLSAEEAKDYGLIDRVI 194
>gi|428312433|ref|YP_007123410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428254045|gb|AFZ20004.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 230
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V + ++A+L++L DP+ I LYINS G G
Sbjct: 43 DIYSRLLRERIIFLGTQVDDTVADSIIAQLLFLDAEDPEKDIQLYINSPG---------G 93
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G A+YDT+ Q++ +V T+ G A M LL AG GKR +P+++IMI QP +
Sbjct: 94 SVTAGMAMYDTMQQIRPDVVTICFGLAASMGAFLLTAGAPGKRMALPNSRIMIHQPLGGA 153
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + ++ TL +LLA HTG S E + R + M + AK++G+ID
Sbjct: 154 QG--QAIDIEIQAREILYHKRTLNQLLAHHTGQSLEKIEADTERDFFMSAAEAKDYGLID 211
Query: 292 KVLWR 296
+V+ R
Sbjct: 212 QVITR 216
>gi|320102927|ref|YP_004178518.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera
pallida ATCC 43644]
gi|319750209|gb|ADV61969.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera
pallida ATCC 43644]
Length = 198
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 103/189 (54%), Gaps = 11/189 (5%)
Query: 106 PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRD 165
PD D+ S LL RI+ +G + +V+ VVA+L+YL DPKA I LYINS G
Sbjct: 13 PDERVIDIYSRLLRDRIIILGTAIDESVSNSVVAQLLYLASEDPKADIRLYINSPG---- 68
Query: 166 DGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQ 225
G + G AIYD + + C+V T +G M LLLAAG GKR MPH +IMI
Sbjct: 69 -----GSVTAGLAIYDMMQSVPCDVATYCIGQCASMGSLLLAAGAAGKRHAMPHGRIMIH 123
Query: 226 QPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAK 285
QP G A+D++I A+E + + L + HTG S E + + R M R AK
Sbjct: 124 QPLAGMEG--TATDIMIHAEEFLRMKKQLNGIYNHHTGQSLEKLEQDTDRDRFMSPREAK 181
Query: 286 EFGVIDKVL 294
E+G+ID ++
Sbjct: 182 EYGLIDHIV 190
>gi|427734237|ref|YP_007053781.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
gi|427369278|gb|AFY53234.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
Length = 234
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ AV +VA+L++L D + I +Y+NS G G
Sbjct: 47 DIYSRLLRERIIFLGTPIDDAVANSLVAQLLFLDADDSEKDIQIYVNSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++ +V T+ G A M LLL AGT GKR +P ++IMI QP +
Sbjct: 98 SVTAGMAIYDTIQQIRPDVVTICFGLAASMGALLLTAGTAGKRMSLPDSRIMIHQPLGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ L ++LA HTG E + R + M + AK +G+ID
Sbjct: 158 QG--QAVDIEIQAKEILYHKSKLNEILASHTGQPLEKIEADTERDFFMSAEEAKNYGLID 215
Query: 292 KVLWR 296
+V+ R
Sbjct: 216 QVISR 220
>gi|414079240|ref|YP_007000664.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972519|gb|AFW96607.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 201
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + L+VA+L++L D + IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGEQVDSNLANLIVAQLLFLDSEDAEKDIYMYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AGTKGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L + LA HTG E +++ R + M AKE+G+ID
Sbjct: 128 QG--QATDIAIQAREILYHKQRLNEFLADHTGQPFERISEDTERDFFMSPAEAKEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|415938744|ref|ZP_11555478.1| ATP-dependent Clp protease, proteolytic subunit [Herbaspirillum
frisingense GSF30]
gi|407759378|gb|EKF69073.1| ATP-dependent Clp protease, proteolytic subunit [Herbaspirillum
frisingense GSF30]
Length = 204
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ A+ L+VA+L++L+ +P I LYINS G G
Sbjct: 29 DIYSRLLKERIIFLVGPVNDAMANLIVAQLLFLESENPDKDISLYINSPG---------G 79
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ +K +V T+ G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 80 SVSAGMAIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGA 139
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R+ L +LA TG S E ++K R M + A E+G+ID
Sbjct: 140 QG--QASDIEIQAREILYLRERLNSILADKTGRSVEQISKDTDRDNFMSADAAVEYGLID 197
Query: 292 KVL 294
KVL
Sbjct: 198 KVL 200
>gi|373496129|ref|ZP_09586677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
gi|404368998|ref|ZP_10974344.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|313688290|gb|EFS25125.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|371966040|gb|EHO83532.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
Length = 191
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 117/212 (55%), Gaps = 23/212 (10%)
Query: 85 SPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYL 144
SPT++ S + ER+ D+ S LL RI+++G + V +VA+L++L
Sbjct: 3 SPTVVESTGRSERAY------------DIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFL 50
Query: 145 QWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACL 204
+ DP I +YINS G G+ + G AIYDT+ +K +V TV +G A M L
Sbjct: 51 EAEDPDKDIIMYINSPG---------GVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGAL 101
Query: 205 LLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGN 264
LL AG KGKR+ + H++IMI QP + G A+D+ I+AKE + ++ L +++A TG
Sbjct: 102 LLGAGAKGKRYALEHSRIMIHQPLGGARG--QATDIEIQAKEILRMKEMLSQIMADCTGK 159
Query: 265 SEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
S + R +M + AK +G+ID+V +
Sbjct: 160 SLSEILNDTERDNYMSAEEAKNYGLIDQVFKK 191
>gi|171059225|ref|YP_001791574.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
gi|226706459|sp|B1Y6H3.1|CLPP_LEPCP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|170776670|gb|ACB34809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
Length = 202
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ LVVA+L++L+ +P I YINS G G
Sbjct: 27 DIYSRLLRERVIFLVGPVNDQSANLVVAQLLFLESENPDKDISFYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G +IYDT+ +K +V T+ +G A M LLAAG KGKRF +P++KIMI QP +
Sbjct: 78 SVSAGMSIYDTMQFIKPQVSTLCMGLAASMGAFLLAAGAKGKRFSLPNSKIMIHQPLGGA 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ L ++LA+ TG S E + R Y M S A+ +G+ID
Sbjct: 138 QG--QATDIEIHAREILKTREQLNRILAERTGQSLEKIQNDTERDYFMSSEEAQTYGLID 195
Query: 292 KVLWR 296
+V+ +
Sbjct: 196 QVISK 200
>gi|116073334|ref|ZP_01470596.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068639|gb|EAU74391.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 200
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 102/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + AV +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGSEVNDAVANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LL AGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTMQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPHSRIMIHQP-LGGTAQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + ++ L + +A TG S E + K R Y + + AK +G+ID+V+
Sbjct: 141 EIEAREILRIKEMLNRSMADMTGQSFEKIEKDTDRDYFLSAEDAKNYGLIDRVI 194
>gi|384248981|gb|EIE22464.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
Length = 202
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 103 EHRPDTPPP-DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTG 161
EH P D+ S LL RIV + + ++ L++A+L+YL+ +P+ PI +YINS G
Sbjct: 12 EHTPRGERSFDIYSRLLRERIVMVNGGIDDHMSNLIIAQLLYLESENPEQPISMYINSQG 71
Query: 162 TTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAK 221
G+ + G AIYDT+ ++ + T+ VG A MA LLLAAG KG R +P+++
Sbjct: 72 ---------GVVTSGLAIYDTMQYIRNPISTLCVGQAASMASLLLAAGEKGHRRSLPNSR 122
Query: 222 IMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDS 281
IM+ QP G ASD+ I A+E L K+ AKHTG SEE + +T+ R +
Sbjct: 123 IMLHQPSGGFQG--QASDIRIHAEEIARLSKRLNKIYAKHTGQSEELIEETLDRDRFQSA 180
Query: 282 RRAKEFGVIDKVL 294
A++FG+ID+V+
Sbjct: 181 DEAQQFGLIDEVI 193
>gi|352096272|ref|ZP_08957152.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676966|gb|EHA60117.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 200
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + V +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGSDVNDGVANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LL AGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTMQYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQP-LGGTAQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + ++ L + +A TG S E + K R Y + + AK++G+ID+V+
Sbjct: 141 EIEAREILRMKEMLNRSMADMTGQSFEKIEKDTDRDYFLSAEEAKDYGLIDRVI 194
>gi|256828014|ref|YP_003156742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
gi|256577190|gb|ACU88326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV +G P+ V + A+L++L+ +P+ IY+YINS G G
Sbjct: 20 DIYSRLLKDRIVLLGTPIDDHVANSICAQLLFLESENPEKQIYMYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + V T+ +G A MA +LLAAG KG R+ +PH++IMI QP
Sbjct: 71 AVTAGMAIYDTMQYISAPVATLCIGQAASMAAVLLAAGEKGMRYTLPHSRIMIHQPMGGF 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + R L +LA HTG + E V + R Y M A +G+ID
Sbjct: 131 QG--QATDIAIQAKEIIRLRGELNGILANHTGQTLEKVEQDTERDYFMSGEEACAYGLID 188
Query: 292 KVLWRGQE 299
+VL +E
Sbjct: 189 QVLASRKE 196
>gi|443324676|ref|ZP_21053413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442795717|gb|ELS05067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 219
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V + VVA+L+YL+ DP+ I LYINS G G
Sbjct: 42 DIYSRLLRERIIFLGTAIDDKVADSVVAQLLYLEAEDPEKDIQLYINSPG---------G 92
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL+ GTKGKR +P ++IMI QP +
Sbjct: 93 SVYSGMAIYDTMQQIQPDVVTICYGIAASMGAFLLSGGTKGKRMSLPSSRIMIHQPLGGA 152
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + + L +L+A HT + ++ R ++M S AKE+G+ID
Sbjct: 153 QG--QAVDIEIQAKEILYIKKRLNELIAGHTEQDFDKISLDTERDFYMSSEEAKEYGLID 210
Query: 292 KVLWRGQET 300
V+ + + +
Sbjct: 211 SVITKSESS 219
>gi|160878535|ref|YP_001557503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
phytofermentans ISDg]
gi|160427201|gb|ABX40764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
phytofermentans ISDg]
Length = 193
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVTDVSASVIVAQLLFLEAEDPGKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ +G A M LLA G KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGMAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNAEVMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + + L +L+++TG E V R Y+M + AK +G+ID
Sbjct: 130 KG--QATDIQIVAENILKIKKKLNTILSENTGKPLEVVEVDTERDYYMSAEEAKNYGIID 187
Query: 292 KVL 294
V+
Sbjct: 188 SVI 190
>gi|242373003|ref|ZP_04818577.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
gi|242349329|gb|EES40930.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
Length = 195
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++LA+ TG S E + + R + + AK +G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKSYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|33862587|ref|NP_894147.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9313]
gi|67460518|sp|Q7V8M4.1|CLPP2_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33634503|emb|CAE20489.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9313]
Length = 200
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 102/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + V +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LL AGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQP-LGGTNQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + +D L +A+ TG S E + K R Y + + AK++G+ID+V+
Sbjct: 141 EIEAREILRIKDMLNHSMAELTGQSFEKIEKDTDRDYFLSAAEAKDYGLIDRVI 194
>gi|42525082|ref|NP_970462.1| ATP-dependent Clp protease proteolytic subunit [Bdellovibrio
bacteriovorus HD100]
gi|60389658|sp|Q6MH11.1|CLPP_BDEBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39577293|emb|CAE81116.1| ATP-dependent Clp protease proteolytic subunit [Bdellovibrio
bacteriovorus HD100]
Length = 212
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 10/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V ++A++++L+ +P+ PI+LYINS G G
Sbjct: 30 DIYSRLLKDRIIILGTAVTDEVANSIIAQMLFLEVDNPEKPIHLYINSPG---------G 80
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYD + +KC+V T +G A M LLL AGTKG R+ +P+ +IMI QP L
Sbjct: 81 SVSAGLAIYDFMQFVKCDVATYCMGMAASMGSLLLTAGTKGMRYSLPNTRIMIHQPLLSG 140
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL +D+ I AKE + ++ L ++ HTG + + + R MD +AKEFG++
Sbjct: 141 GGLSGQVTDIEIHAKELVKTKEKLTRIYETHTGRDYDTLRAAMERDNFMDPYQAKEFGLL 200
Query: 291 DKVL 294
D V+
Sbjct: 201 DHVV 204
>gi|373106651|ref|ZP_09520951.1| ATP-dependent Clp protease proteolytic subunit [Stomatobaculum
longum]
gi|371651590|gb|EHO17016.1| ATP-dependent Clp protease proteolytic subunit [Stomatobaculum
longum]
Length = 193
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + LVVA+L++L+ DP I LYINS G G
Sbjct: 19 DIFSRLLKDRIIFLDEEVNDVSAGLVVAQLLFLESEDPDKDINLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ +G A M LL+ GTKGKR+ +P+A+IMI QP +
Sbjct: 70 SVTAGMAIYDTMQYVKCDVSTICIGMAASMGAFLLSGGTKGKRYALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +++ I A++ + R+ L ++LA +TG E + + R +M + AKE+G+ID
Sbjct: 130 QG--QETEIRIVAEQILKTRNKLNEILAANTGKDLEVIARDTERDNYMTAAEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|315644534|ref|ZP_07897666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
gi|315280041|gb|EFU43338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
Length = 198
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A++++L DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ VG A M LL AG KGKR+ +P+++IMI QP +
Sbjct: 70 SITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L ++L+ TG E + K R Y M + AKE+G+ID
Sbjct: 130 QG--QATDIEIRARRILKMRDKLNRILSDRTGQPLERIEKDTDRDYFMTADEAKEYGLID 187
Query: 292 KVL 294
+VL
Sbjct: 188 QVL 190
>gi|418632534|ref|ZP_13194964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
gi|374832104|gb|EHR95824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
Length = 194
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIHHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R+ L ++L++ TG S E + + R + + AKE+G+ID
Sbjct: 130 QG--QATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|254431764|ref|ZP_05045467.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626217|gb|EDY38776.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 200
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + AV +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFMGSEVNDAVANALVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LL AGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTMQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPHSRIMIHQP-LGGTSQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I AKE + +D L +A TG E + K R Y + + AK++G+ID+V+
Sbjct: 141 AIEAKEILRIKDMLNHSMADMTGQPFEKIEKDTDRDYFLSAAEAKDYGLIDRVI 194
>gi|254432364|ref|ZP_05046067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626817|gb|EDY39376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 235
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 11/192 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + AV + +VA+L++L+ DP+ I +YINS G G
Sbjct: 53 DIYSRLLRERIIFLGTGIDDAVADALVAQLLFLEAEDPEKDIQIYINSPG---------G 103
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q+ +V T+ G A M LL+ GTKGKR +P A+IMI QP +
Sbjct: 104 SVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMIHQPLGGA 163
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + +DTL L+A+HTG E + + R Y + A ++G+ID
Sbjct: 164 QG--QAVDIEIQAKEILFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVDYGLID 221
Query: 292 KVLWRGQETIMA 303
+V+ T +A
Sbjct: 222 RVVNETTRTAVA 233
>gi|119491296|ref|ZP_01623350.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119453460|gb|EAW34622.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 203
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + L+VA++++L DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIFLGQQVTADLANLIVAQMLFLDADDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G IYDT+ ++ +V T+ +G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVSAGLGIYDTMNHIRPDVSTICIGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L + LA HTG + + R + M ++ A ++G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKKRLNQSLADHTGQPMSRIEQDTERDFFMSAQEAVDYGLID 185
Query: 292 KVLWR 296
+V R
Sbjct: 186 QVYDR 190
>gi|329121861|ref|ZP_08250476.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
gi|327467799|gb|EGF13291.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
Length = 205
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 111/189 (58%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + +++A+L++L+ DP I+LYINS G G
Sbjct: 25 DIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAEDPDKDIHLYINSPG---------G 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ +V T+ +G+ MA +LL +G KGKRF +PH+ +MI QP
Sbjct: 76 VVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTSGAKGKRFALPHSNVMIHQPLGGV 135
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+E + RD L +LAKHTG + + K R M + A ++G+ID
Sbjct: 136 QG--QATEIEIHAREILRLRDELNGILAKHTGQPLDVIKKDTERDNFMTAENALKYGLID 193
Query: 292 KVLWRGQET 300
K+L R + T
Sbjct: 194 KILTRNELT 202
>gi|329120061|ref|ZP_08248731.1| ATP-dependent Clp protease, protease subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327463592|gb|EGF09910.1| ATP-dependent Clp protease, protease subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 211
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 112/184 (60%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ LVVA++++L+ +P I+ YINS G G
Sbjct: 26 DIYSRLLKERIIFLIGPVNDHTANLVVAQMLFLESENPDKDIFFYINSPG---------G 76
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G +++DT+ +K +V T+ +G A M LL+AG KGKRF +PH+++MI QP L S
Sbjct: 77 SVTAGMSVFDTMNFIKPDVSTLCLGQAASMGAFLLSAGAKGKRFALPHSRVMIHQP-LIS 135
Query: 232 SGL-LPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL ASD+ I A+E + + TL +LLAKHTG E + + R M ++ AKE+G+I
Sbjct: 136 GGLGGQASDIEIHARELIKLKQTLNELLAKHTGQPIEKIERDTDRDNFMSAQAAKEYGLI 195
Query: 291 DKVL 294
D+V+
Sbjct: 196 DQVI 199
>gi|284929721|ref|YP_003422243.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284810165|gb|ADB95862.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 200
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPERDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ +++ +V TV G A M LL+AG KGKR +P+++IMI QP +
Sbjct: 68 SVSSGLGIFDTMNKIQPDVCTVCTGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L LA HTG + + R + M + AK +G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKSLLNNHLADHTGQPLSKIAEDTERDFFMSAEEAKNYGLID 185
Query: 292 KVLWRGQET 300
+V+ R T
Sbjct: 186 QVISRDSST 194
>gi|342214320|ref|ZP_08707021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. oral taxon 780 str. F0422]
gi|341594551|gb|EGS37240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. oral taxon 780 str. F0422]
Length = 199
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + P+ V +VA+L++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKDRIILLSGPIDDTVANSIVAQLLFLESEDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ VG+A M LLL AG GKR+ +PH++IMI QP
Sbjct: 71 VVTAGMAIYDTMQYIKPDVSTICVGSAASMGSLLLTAGAPGKRYALPHSRIMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G AS++ I A+E + R+ L +LA HTG E + + R M + AK +G+ID
Sbjct: 131 QG--QASEIEIHAREILRLREELNGVLAYHTGQPIEVIAQDTDRDNFMSAEDAKRYGLID 188
Query: 292 KVLWRGQET 300
+VL R T
Sbjct: 189 EVLTRTSST 197
>gi|260432980|ref|ZP_05786951.1| Clp protease [Silicibacter lacuscaerulensis ITI-1157]
gi|260416808|gb|EEX10067.1| Clp protease [Silicibacter lacuscaerulensis ITI-1157]
Length = 210
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+I P+ ++ L+VA+L++L+ +PK I +YINS G G
Sbjct: 28 DIFSRLLKERIVFINGPIHDGMSHLIVAQLLHLEAENPKKEISIYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K + T+ +G A M +LLA G KG RF +P+++IM+ QP
Sbjct: 79 VVTSGLAIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFALPNSRIMVHQPSGGY 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD++I A E +D L + AKHTG S++ + K + R M AKE+G ID
Sbjct: 139 QG--QASDIMIHAAETQKLKDRLYDIYAKHTGQSKKTIEKALDRDNFMSPEEAKEWGHID 196
Query: 292 KVL 294
+++
Sbjct: 197 EIV 199
>gi|113952713|ref|YP_729943.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9311]
gi|113880064|gb|ABI45022.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. CC9311]
Length = 200
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + V +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGQDVNDGVANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LL AGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTMQYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQP-LGGTAQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + ++ L + +A TG S E + K R Y + + AK++G+ID+V+
Sbjct: 141 EIEAREILRMKEMLNRSMADMTGQSFEKIEKDTDRDYFLSAAEAKDYGLIDRVI 194
>gi|219885303|gb|ACL53026.1| unknown [Zea mays]
Length = 302
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 93 DILSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLKPVHLYINSPG---------G 143
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ +G A M LLLAAG G+R +P+A++MI QP +
Sbjct: 144 VVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGA 203
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ KHT + + + + R MD A+++G+ID
Sbjct: 204 QGQ--ATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPEEARDWGLID 261
Query: 292 KVL 294
+V+
Sbjct: 262 EVI 264
>gi|189345948|ref|YP_001942477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
gi|189340095|gb|ACD89498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
Length = 225
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LV+A+L++L+ DP+ I++YINS G G
Sbjct: 44 DIFSRLLRERIIFLGSGIDEHVAGLVMAQLIFLESEDPERDIFIYINSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G IYDT+ ++ ++ TV VG A M LLA+GTKGKR +PH++IMI QP +
Sbjct: 95 SVSAGLGIYDTMQYIRPDIATVCVGMAASMGAFLLASGTKGKRASLPHSRIMIHQPSGGA 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +D++I+A+E R L +LLAKHTG + + + R M++ A E+G+ID
Sbjct: 155 QG--QETDIIIQAREIEKIRKLLEELLAKHTGRDVQQIREDSERDRWMNAAEALEYGIID 212
Query: 292 KVL 294
+V
Sbjct: 213 QVF 215
>gi|336449969|ref|ZP_08620426.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Idiomarina
sp. A28L]
gi|336283126|gb|EGN76333.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Idiomarina
sp. A28L]
Length = 211
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 12/194 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL I+++ P+ + L+VA++++L+ +P+ IYLYINS G G
Sbjct: 28 DIYSRLLKEGIIFLVGPVEEQMANLIVAQMLFLESENPEKDIYLYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ +G A M LLA G KGKRF +P++++MI QP
Sbjct: 79 SVTAGMAIYDTMQFIRNDVSTICIGQAASMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E M +D L ++LA+HTG E V R M S ++ +G++D
Sbjct: 139 QG--QASDIEIHAREIMYIKDKLNRILAEHTGQDIERVANDTDRDNFMSSEQSVAYGIVD 196
Query: 292 KVL-WRGQETIMAE 304
+VL RG E +A+
Sbjct: 197 EVLSHRGAEKGIAK 210
>gi|114777030|ref|ZP_01452050.1| ATP-dependent Clp protease proteolytic subunit [Mariprofundus
ferrooxydans PV-1]
gi|114552551|gb|EAU55011.1| ATP-dependent Clp protease proteolytic subunit [Mariprofundus
ferrooxydans PV-1]
Length = 207
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 11/192 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ + L++A+L++L+ P IY+YINS G G
Sbjct: 19 DIFSRLLKERIVFLNGQVDDHTANLIIAQLLFLESEGPDKDIYMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C+V T+ +G A M LLA+G GKRF +P+++IMI QP
Sbjct: 70 VVTSGLAIYDTMQYIRCDVSTLCIGQAASMGAHLLASGAPGKRFSLPNSRIMIHQPLGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + ++ L +++AKHTG E + + R Y + + +A E+G++D
Sbjct: 130 QG--QATDIEIHAREILSLKNRLNEMMAKHTGQPIEKLADDVERDYFLTADQACEYGLVD 187
Query: 292 KVLWRGQETIMA 303
KVL E + A
Sbjct: 188 KVLSSRAEAVAA 199
>gi|25019682|gb|AAN71768.1| ClpP2 [Synechococcus elongatus PCC 7942]
Length = 302
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + AV + +VA+L++L+ DP+ I LYINS G G
Sbjct: 115 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPG---------G 165
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q+ +V T+ G A M LL+ G +GKR +P A+IMI QP +
Sbjct: 166 SVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGA 225
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + ++ TL LLA+HTG E + R + M AK +G+ID
Sbjct: 226 QG--QAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLID 283
Query: 292 KVLWR 296
+VL R
Sbjct: 284 QVLTR 288
>gi|291460376|ref|ZP_06599766.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291416943|gb|EFE90662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 209
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RIV++G + LVVA+L+YL+ DP + LYINS G G
Sbjct: 28 DIFSRLLNERIVFLGDEVNNDTASLVVAQLLYLESEDPDKDVSLYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +KC+V T+ VG A M LLA GTKGKR ++P+A++MI QP +
Sbjct: 79 VITAGMAIYDTMQYIKCDVSTICVGMAASMGAFLLAGGTKGKRMILPNAEVMIHQPSGGA 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + + + ++LA++ G S E V + R + MD+ +A +G++D
Sbjct: 139 QG--QATEIQITAEWILRTKKHMAEILAENCGQSLEKVLEDTERDHWMDAEQALSYGLVD 196
Query: 292 KVL 294
++
Sbjct: 197 RIF 199
>gi|159043937|ref|YP_001532731.1| ATP-dependent Clp protease proteolytic subunit [Dinoroseobacter
shibae DFL 12]
gi|189082456|sp|A8LJA8.1|CLPP_DINSH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157911697|gb|ABV93130.1| endopeptidase Clp [Dinoroseobacter shibae DFL 12]
Length = 208
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ P+ +++LVVA+L++L+ +P I +YINS G G
Sbjct: 27 DIFSRLLKERIVFVNGPVHDGMSQLVVAQLLHLEAENPSKEISMYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ +K +V T+ VG A M LLL AG KG RF +P+++IM+ QP
Sbjct: 78 VVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGEKGMRFSLPNSRIMVHQPSGGY 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D++I A+E +D L ++ KHTG + V + R MD+ +AKE+G+ID
Sbjct: 138 QG--QATDIMIHAQETQKLKDRLNQIYVKHTGQPLKKVVDALERDNFMDAEQAKEWGLID 195
Query: 292 KVL 294
+++
Sbjct: 196 EIV 198
>gi|323144789|ref|ZP_08079363.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Succinatimonas hippei YIT 12066]
gi|322415435|gb|EFY06195.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Succinatimonas hippei YIT 12066]
Length = 200
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ + + +L+VA+L++L+ DP IYLYINS G G
Sbjct: 21 DIYSRLLKERVIFMTGEVEDHMADLIVAQLLFLESDDPDKDIYLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LLA G GKRF +PH++IMI QP
Sbjct: 72 VVTAGMAIYDTMQYIKPDVCTLCMGQACSMGSFLLAGGAPGKRFALPHSRIMIHQPLGGF 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD++I A+E + TL +LLAKHTG S + V + R M + A +G+ID
Sbjct: 132 KG--QASDIMIHARETERVKRTLTELLAKHTGKSVDEVMQDCDRDNFMSAEEALAYGLID 189
Query: 292 KVL 294
+V+
Sbjct: 190 RVI 192
>gi|83644978|ref|YP_433413.1| ATP-dependent Clp protease proteolytic subunit ClpP [Hahella
chejuensis KCTC 2396]
gi|83633021|gb|ABC28988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hahella
chejuensis KCTC 2396]
Length = 213
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 126/228 (55%), Gaps = 26/228 (11%)
Query: 70 RPSNSGTLPYLDIYDS--PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGM 127
R N+ + L+I ++ P ++ A+ ERS D+ S LL RI+++
Sbjct: 3 RDDNATMMNKLEIANALVPMVVEQTARGERSY------------DIYSRLLKERIIFLVG 50
Query: 128 PLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMK 187
+ + LVVA+L++L+ +P I+LYINS G G + G +IYDT+ +K
Sbjct: 51 QVEDHMANLVVAQLLFLESENPDKDIHLYINSPG---------GSVTAGLSIYDTMQFIK 101
Query: 188 CEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL-PASDVLIRAKE 246
+V T+ +G A M LLL+ G GKR+ +PH+++MI QP L GL ASD+ I AKE
Sbjct: 102 PDVSTMCIGQAASMGALLLSGGAAGKRYCLPHSRVMIHQPLL--GGLQGQASDIEIHAKE 159
Query: 247 AMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
++ R+ L +L+KHTG E + + R MD+ AK +G+ID VL
Sbjct: 160 ILLLREKLNNILSKHTGQDIETIARDTDRDKFMDAEMAKNYGLIDSVL 207
>gi|255323211|ref|ZP_05364346.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
gi|424783006|ref|ZP_18209849.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
showae CSUNSWCD]
gi|255299734|gb|EET79016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
gi|421959149|gb|EKU10760.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
showae CSUNSWCD]
Length = 196
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + + +VA++++L+ DP IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGEIEDGMASAIVAQMLFLEAEDPDKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GF+IYDT+ +K +V T+ +G A M LL+ G +GKR+ +P+++IMI QP +
Sbjct: 71 VITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYALPNSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L +LAK+TG + K R + M S AKE+G+ID
Sbjct: 131 RG--QATDIEIQAKEILRMKEILNAILAKNTGQKLAKIQKDTDRDFFMSSAEAKEYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLEK 193
>gi|357419906|ref|YP_004932898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
gi|355397372|gb|AER66801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
Length = 192
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG + + LVVA+L++L+ DP+ +Y+YINS G G
Sbjct: 18 DIYSRLLKDRIVFIGEAIDDHLANLVVAQLLFLESEDPEKDVYVYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +KC V T+ +G A MA +LLA G GKR +P A+IM+ QP +
Sbjct: 69 VITSGLAIYDTMQYIKCPVSTICIGQAASMAAVLLAGGEPGKRIALPSARIMLHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I A+E + ++ L +L HT E + R + M + AKE+G+ID
Sbjct: 129 QG--QAVDIEIHAREILRLKERLNDILTYHTKQPREKIEADTDRDFFMSAEEAKEYGIID 186
Query: 292 KVLWR 296
+V+ +
Sbjct: 187 QVIEK 191
>gi|354567676|ref|ZP_08986844.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542134|gb|EHC11598.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 231
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VA+L++L DP+ I LYINS G G
Sbjct: 44 DIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDPEKDIQLYINSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LLAAGT GKR +P ++IMI QP +
Sbjct: 95 SVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLAAGTAGKRMSLPDSRIMIHQPLGGA 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + + L +LLA HTG E + R + M + AK +G+ID
Sbjct: 155 QG--QAIDIEIQAREILYIKGKLNQLLAHHTGQPLERIEADTDRDFFMSAEEAKNYGLID 212
Query: 292 KVLWR 296
+V+ R
Sbjct: 213 QVITR 217
>gi|56478265|ref|YP_159854.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
gi|67460188|sp|Q5P161.1|CLPP_AZOSE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56314308|emb|CAI08953.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
Length = 212
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ L+VA+L++L+ +P +Y YINS G G
Sbjct: 35 DIYSRLLKERVIFLVGPVNDVTANLIVAQLLFLESENPDKDVYFYINSPG---------G 85
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K V T+ +G A M LLAAG KGKRF +P++++MI QP
Sbjct: 86 SVSSGMAIYDTMQFIKPSVSTLCIGQAASMGSFLLAAGEKGKRFCLPNSRVMIHQPLGGF 145
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R L ++LAKHTG E + K R M + A E+G++D
Sbjct: 146 QG--QASDIEIHAREILGIRAKLNEMLAKHTGQPIEQIEKDTDRDRFMSAADAVEYGIVD 203
Query: 292 KVL 294
KVL
Sbjct: 204 KVL 206
>gi|421074039|ref|ZP_15535081.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans JBW45]
gi|392527836|gb|EIW50920.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans JBW45]
Length = 201
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 116/188 (61%), Gaps = 11/188 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++IG P+ V +V+A+L++L+ DP+ I++YINS G G
Sbjct: 19 DIFSRLLKDRIIFIGGPIDDNVANVVIAQLLFLESEDPEKDIHMYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + AIYDT+ +K +V T+ +G+A A LL+AG KGKR+ +P A+IMI QP +
Sbjct: 70 VVTAALAIYDTMQYIKPDVSTICMGSAASAAAFLLSAGAKGKRYALPFARIMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ L +LA HTG S E + R + M S +AKE+G+ID
Sbjct: 130 QG--QATDIEIHAREILRLRELLNGILATHTGQSREKLEHDTERDFFMSSEQAKEYGLID 187
Query: 292 KVLWRGQE 299
V+ RG++
Sbjct: 188 AVVARGEK 195
>gi|300866516|ref|ZP_07111206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300335473|emb|CBN56366.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 229
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L++L DP+ I LYINS G G
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPG---------G 92
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++ +V T+ G A M L+AAG GKR +P ++IMI QP +
Sbjct: 93 SVTAGMAIYDTMQQVRPDVVTICYGLAASMGAFLMAAGAAGKRMSLPSSRIMIHQPLGGA 152
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ L +LLA HTG E + R + M + AK++G++D
Sbjct: 153 QG--QAVDIEIQAKEILYHKRKLNELLAHHTGQPLERIEADTERDFFMSAAEAKDYGLVD 210
Query: 292 KVLWR 296
+V+ +
Sbjct: 211 QVILK 215
>gi|226491764|ref|NP_001150643.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|195640820|gb|ACG39878.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|413937908|gb|AFW72459.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 302
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 93 DIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLKPVHLYINSPG---------G 143
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ +G A M LLLAAG G+R +P+A++MI QP +
Sbjct: 144 VVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGA 203
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ KHT + + + + R MD A+++G+ID
Sbjct: 204 QGQ--ATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPEEARDWGLID 261
Query: 292 KVL 294
+V+
Sbjct: 262 EVI 264
>gi|254455562|ref|ZP_05068991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082564|gb|EDZ59990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Pelagibacter sp. HTCC7211]
Length = 203
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + V LV A+L++L+ DPK IYLYINS G G
Sbjct: 28 DIYSRLLKERIIFLTGQINDNVASLVTAQLLFLEAEDPKKEIYLYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G IYDT+ +K ++ T+ +G A M LLAAGTKGKRF +P++++M+ QP
Sbjct: 79 LVTAGLGIYDTMQYVKPDISTLCIGQAASMGSFLLAAGTKGKRFSLPNSRVMVHQPSAGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +D+ I A E + L ++ +KHTG S + V + R M + AK+FG+ID
Sbjct: 139 QG--QVTDIEIHANEVSSLKKRLNEIYSKHTGKSVDEVKAALERDNFMTADVAKDFGLID 196
Query: 292 KVLWR 296
+V+ +
Sbjct: 197 EVVEK 201
>gi|345858360|ref|ZP_08810754.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus sp. OT]
gi|344328554|gb|EGW39938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus sp. OT]
Length = 205
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 112/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V+ LVVA++++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGAIDDDVSNLVVAQMLFLEAEDPEKDINLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ +G A M LL AG KGKR +P+++++I QP +
Sbjct: 71 SITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLTAGAKGKRVALPNSEVLIHQPLIGG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL A+++ I AK+ + + + K+L++ TG E + K R Y+M + AKE+G++
Sbjct: 131 HGLSGQATEIEIHAKQLLRTKAKMNKILSERTGQPLEKIEKDTERDYYMTAEEAKEYGLV 190
Query: 291 DKVLWR 296
D++L +
Sbjct: 191 DQILEK 196
>gi|406893554|gb|EKD38590.1| hypothetical protein ACD_75C00684G0001 [uncultured bacterium]
Length = 176
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RIV++G + V ++VA+L++L+ DP I YINS G G + G AIY
Sbjct: 4 RIVFLGSGVNDDVANVIVAQLLFLEAEDPDKDITFYINSPG---------GSVTAGMAIY 54
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K ++ T+ +G A M LLAAGT GKR+ +P+A+IMI QP G A+D+
Sbjct: 55 DTMQYVKSDIATLCIGQAASMGAFLLAAGTDGKRYSLPNARIMIHQPAGGFQG--QATDI 112
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
I+AKE + + L LLA HT NS E ++ R + M AK +G+IDKVL +E
Sbjct: 113 DIQAKEILRMKKDLNYLLAHHTKNSLEKISADTERDFFMGPSEAKSYGIIDKVLTNREE 171
>gi|403745256|ref|ZP_10954194.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121484|gb|EJY55777.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
Length = 185
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V VVA+L++L DP I +YINS G G
Sbjct: 12 DIYSRLLKDRIIFLGTAIDDDVANAVVAQLLFLAADDPDKDIQMYINSPG---------G 62
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ VG A M +LL AG KGKRF +P++++MI QP +
Sbjct: 63 SVSAGLAIYDTMQHIKPDVSTMCVGMAASMGAVLLTAGAKGKRFALPNSEVMIHQPLGGA 122
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+ + R+ L K+LA+ +G E V + R M + AK +G+ID
Sbjct: 123 RG--QASDIEIHARHILKTRERLNKILAERSGQPLERVAQDTDRDNFMSAEEAKAYGLID 180
Query: 292 KVLWR 296
+V++R
Sbjct: 181 EVIYR 185
>gi|295109356|emb|CBL23309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
obeum A2-162]
Length = 193
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASIIVAQLLFLEAEDPSKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T+ +G A M LLA GTKGKR+ +PH+ IMI QP +
Sbjct: 70 SVTAGMAIYDTMKYIKCDVSTICLGMAASMGAFLLAGGTKGKRYALPHSTIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + TL ++LA++TG E V K R +M + AK +G+ID
Sbjct: 130 QG--QATEIQIVADHIAQTKRTLNEILAENTGQPYEVVEKDTDRDNYMTAEEAKAYGLID 187
Query: 292 KVL 294
V+
Sbjct: 188 GVV 190
>gi|253826954|ref|ZP_04869839.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|313142738|ref|ZP_07804931.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|253510360|gb|EES89019.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|313131769|gb|EFR49386.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
Length = 196
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + V +V++L++L+ DP+ IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGQIDDGVAASIVSQLLFLEAEDPQKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ +K ++ T+ +G A M LL+ GTKGKR+ +P+++IMI QP +
Sbjct: 71 VVTSGLSIYDTMNYIKPDICTICIGQAASMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + TL ++LA +T S E + K R + M ++ AK++G+ID
Sbjct: 131 QG--QATDIEIQAKEILRLKATLNEILADNTNQSLEKIAKDTDRDFFMSAKEAKDYGLID 188
Query: 292 KVLWR 296
+L +
Sbjct: 189 NILTK 193
>gi|253575504|ref|ZP_04852841.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845151|gb|EES73162.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 198
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A++++L DP I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLDAEDPTKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LL AG GKR+ +P+++IMI QP +
Sbjct: 70 SITAGMAIYDTMQFIKADVSTICVGLAASMGAFLLNAGAPGKRYALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ IRA+ + RD L ++L++ TG E + K R Y M + AKE+G+ID
Sbjct: 130 EG--QATDIEIRARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFMSAAEAKEYGLID 187
Query: 292 KVLWR 296
+V+ +
Sbjct: 188 QVIEK 192
>gi|317470420|ref|ZP_07929809.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
gi|316902100|gb|EFV24025.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
Length = 202
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 111/189 (58%), Gaps = 10/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + L+VA++++L+ DP I LYINS G G
Sbjct: 19 DIFSRLLSDRIIFLVEEVSDISASLIVAQMLFLEAQDPGRDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ ++C+V T+ VG A LLA GT+GKR +P+A+IMI QP +
Sbjct: 70 SVTAGFAIYDTMKYIQCDVATICVGLAASFGAFLLAGGTQGKRMALPNAEIMIHQPAIHG 129
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
+G+ PASD+ I + N+ L ++LA++TG S E + + R + M + A ++G+I
Sbjct: 130 NGIQGPASDIKIMSDYMQKNKQRLNRILAENTGRSIEEIERDTDRDHFMSAEEALKYGLI 189
Query: 291 DKVLWRGQE 299
D V+ + Q+
Sbjct: 190 DSVISKRQK 198
>gi|334121380|ref|ZP_08495450.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333455094|gb|EGK83755.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 202
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ ++ T+ +G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMNHIRPDICTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L + LA HTG + + R + M + AK++G++D
Sbjct: 128 QG--QATDIEIQAKEILYHKRRLNEHLANHTGQPLSRIEEDTERDFFMSAEEAKDYGLVD 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|300865787|ref|ZP_07110541.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300336200|emb|CBN55696.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 203
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVTSDLANLIVAQLLFLDAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ EV T+ +G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMNHIRPEVSTICLGLAASMGAFLLSAGAKGKRMTLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L + LA HTG + + R + M + A E+G++D
Sbjct: 128 QG--QATDIEIQAKEILYHKRRLNEHLAAHTGQPLSRIEEDTERDFFMSAAEATEYGLVD 185
Query: 292 KVLWR 296
V+ R
Sbjct: 186 LVIDR 190
>gi|431795130|ref|YP_007222035.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785356|gb|AGA70639.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 202
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V ++VA+L++L+ DP+ I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPVSDDVANVIVAQLLFLEAEDPEKDIFLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ +VHT+ VG A M LL AG KGKR +P+A+I+I QP +
Sbjct: 71 SISAGMAIYDTMQYIRPDVHTICVGLAASMGAFLLTAGAKGKRTALPNAEILIHQPLIGG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G+ A+++ I AK + ++ + ++LA+ TG + E + R +M + AK +G+I
Sbjct: 131 GGISGQATEIEIHAKHLLRIKERMNRILAERTGQAFEQIEADTDRDRYMTAEEAKTYGLI 190
Query: 291 DKVLWR 296
D+VL +
Sbjct: 191 DEVLEK 196
>gi|226227816|ref|YP_002761922.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas
aurantiaca T-27]
gi|226091007|dbj|BAH39452.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas
aurantiaca T-27]
Length = 204
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 10/192 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +++A++++L +P+ PI+LYINS G G
Sbjct: 21 DIFSRLLMDRIIFLGSPINDDVANIIIAQMLFLDADNPEKPIHLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G A+YDT+ +K V+T +G A M LL AG G R +PH++IMI QP +
Sbjct: 72 SVSAGLAMYDTMQFIKAPVYTTCMGMAASMGAFLLCAGAPGHRAALPHSRIMIHQPS-QN 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R + +L+AKHTG E V + R M + AKE+G+ID
Sbjct: 131 GGGGSASDIEIQAREILYLRAKMNELMAKHTGRQVEQVERDTDRDRFMSADDAKEYGLID 190
Query: 292 KVLWRGQETIMA 303
V+ E + A
Sbjct: 191 NVIQVQAELVAA 202
>gi|365156025|ref|ZP_09352363.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus smithii
7_3_47FAA]
gi|363627734|gb|EHL78586.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus smithii
7_3_47FAA]
Length = 197
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +VA+L++L+ +P+ I +YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDTVANSIVAQLLFLEAENPEKDISIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLAAGTKGKR+ +P+A++MI QP +
Sbjct: 70 SITAGMAIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTKGKRYALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + +D L K+L++ TG E + K R M ++RAKE+G+ID
Sbjct: 130 QG--QATEIEIAAKRILFLKDKLNKILSERTGQPLEVIEKDTDRDNFMTAQRAKEYGLID 187
Query: 292 KVLWR 296
++ R
Sbjct: 188 HIISR 192
>gi|365174864|ref|ZP_09362302.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
gi|363613729|gb|EHL65234.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
Length = 194
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LVVA++++L+ DP I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDTVANLVVAQMLFLESEDPDKDISLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ ++ V T+ +G A M +LL AG GKR +P+AKIMI QP
Sbjct: 71 SVSAGLAIYDTMQYIRPNVSTICLGMAASMGAVLLTAGADGKRLALPNAKIMIHQPMGGM 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + R+ L ++LAKHT + + R Y+M + A ++G++D
Sbjct: 131 QG--QASDIEIHAKEILKTREKLNEILAKHTRQPLDKIEADTDRDYYMSAEEALKYGIVD 188
Query: 292 KVLWR 296
K++ +
Sbjct: 189 KIIEK 193
>gi|289523086|ref|ZP_06439940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503629|gb|EFD24793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 194
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + LVVA++++L+ DP I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGDVIEEHLANLVVAQMLFLESEDPDKDINLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G IYDT+ +KC V T+ VG A MA +LLAAG KGKR +P++++M+ QP
Sbjct: 71 SVTAGLGIYDTMQYIKCPVSTICVGQAASMAAVLLAAGAKGKRIALPNSRVMLHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE RD L +++A HT E V K R + M + A +G++D
Sbjct: 131 QG--QATDIEIHAKEIKKIRDRLNEIIAYHTNQDIEKVAKDTDRDFFMSAEEALAYGIVD 188
Query: 292 KVLWR 296
KV+ +
Sbjct: 189 KVIEK 193
>gi|428211847|ref|YP_007084991.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428000228|gb|AFY81071.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 234
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL S LL RIV++G P+ V +L+VA++++L DP+ I LYINS G G
Sbjct: 47 DLYSRLLRERIVFLGTPVDDNVADLIVAQMLFLDAEDPEKDIQLYINSPG---------G 97
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++ +V T+ G A M LL AG KGKR +P ++IMI QP +
Sbjct: 98 SVTAGMAIYDTMQQIRPDVATICYGLAASMGAFLLTAGAKGKRMSLPSSRIMIHQPLGGA 157
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ L ++LA HTG E + R + M + ++ +G+ID
Sbjct: 158 QG--QAVDIEIQAKEILYHKRQLNEMLAFHTGQPLERIEADTDRDFFMSAEESRAYGLID 215
Query: 292 KVLWR 296
+V+ +
Sbjct: 216 QVITK 220
>gi|395225605|ref|ZP_10404124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
gi|394446228|gb|EJF07066.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
Length = 197
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + AV +VA+L++L+ DP+ IY YINS G G
Sbjct: 19 DIYSRLLKDRIVMLSGEVNDAVASSIVAQLLFLEAEDPEKDIYFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ +K +V T+ +G A M LL+AG KGKR+ +P+A+IMI QP +
Sbjct: 70 VITSGMSIYDTMNYIKPQVSTICIGQAASMGAFLLSAGEKGKRYALPNARIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + + L K+L+++TG S E + + R M + + ++G+ID
Sbjct: 130 KG--QATDIQIQAEEILRMKRDLNKILSENTGQSIETIERDTERDKFMSAEESAQYGLID 187
Query: 292 KVLWR 296
KVL R
Sbjct: 188 KVLSR 192
>gi|123967079|ref|YP_001012160.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
gi|123201445|gb|ABM73053.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 204
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + VT+ +VA+L++L+ DP I +YINS G G
Sbjct: 29 DIYSRLLRERIIFLGTGINDQVTDSLVAQLLFLEAEDPDKDIQIYINSPG---------G 79
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q+ +V T+ G A M LL+ G KGKR +P+++IMI QP +
Sbjct: 80 SVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGA 139
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A ++ I+AKE + + TL LL++HTG S E + + R Y + A ++G+ID
Sbjct: 140 QG--QAVEIEIQAKEILFLKKTLNSLLSEHTGQSLEKINEDTERDYFLSPEEAVQYGLID 197
Query: 292 KVL 294
KV+
Sbjct: 198 KVI 200
>gi|323484460|ref|ZP_08089826.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14163]
gi|323692476|ref|ZP_08106710.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
gi|355628696|ref|ZP_09049918.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_3_54FAA]
gi|323402238|gb|EGA94570.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14163]
gi|323503473|gb|EGB19301.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
gi|354819586|gb|EHF04027.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_3_54FAA]
Length = 193
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L+V++L++L+ DP I+LYINS G G
Sbjct: 19 DIFSRLLKERIIFLGEEVTDTSAGLIVSQLLFLESEDPNKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +KC+V T+ G A M LLA G KGKRF +P+A++MI QP +
Sbjct: 70 SVSAGLAIYDTMNYIKCDVSTICFGMAASMGAFLLAGGAKGKRFALPNAEVMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A++ + + L ++LA +TG E + + R +M ++ A E+G+ID
Sbjct: 130 QG--QATEIQIVAEKILQTKKKLNEILAANTGQPYEVIERDTDRDNYMTAQEAMEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 RVI 190
>gi|300311895|ref|YP_003775987.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum
seropedicae SmR1]
gi|124483356|emb|CAM32551.1| ATP-dependent Clp protease (proteolytic subunit) protein
[Herbaspirillum seropedicae]
gi|300074680|gb|ADJ64079.1| ATP-dependent Clp protease (proteolytic subunit) protein
[Herbaspirillum seropedicae SmR1]
Length = 208
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ A+ L+VA+L++L+ +P I LYINS G G
Sbjct: 33 DIYSRLLKERIIFLVGPVNDAMANLIVAQLLFLESENPDKDISLYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ +K +V T+ G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 84 SVSAGMAIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGA 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R+ L +LA+ TG + E ++K R M + A E+G+ID
Sbjct: 144 QG--QASDIEIQAREILYLRERLNTILAEKTGRTVEQISKDTDRDNFMSADAAAEYGLID 201
Query: 292 KVL 294
KVL
Sbjct: 202 KVL 204
>gi|188581623|ref|YP_001925068.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
populi BJ001]
gi|226706462|sp|B1Z9C7.1|CLPP_METPB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179345121|gb|ACB80533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium populi BJ001]
Length = 208
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ L+VA+L++L+ +PK I YINS G G
Sbjct: 28 DIYSRLLRERIIFLTGPVEDQGASLIVAQLLFLEAENPKKEISFYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++C V T+ VG A M LLLAAG G RF +P+A+IM+ QP
Sbjct: 79 VVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLAAGEAGHRFALPNARIMVHQPSGGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+LI A+E + L ++ KHTG E + + + R M + AKEFG+ID
Sbjct: 139 QG--QATDILIHAREIEALKKRLNEIYVKHTGRDYETIHQALERDNFMTADAAKEFGLID 196
Query: 292 KVLWR 296
+L +
Sbjct: 197 DILHK 201
>gi|17228733|ref|NP_485281.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759071|sp|Q8YXH5.1|CLPP1_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|17130585|dbj|BAB73195.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 204
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L DP+ IYLYINS G G
Sbjct: 18 DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 69 SVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L LA+HTG E + + R + M AK++G+ID
Sbjct: 129 QG--QATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLID 186
Query: 292 KVLWR 296
+V+ R
Sbjct: 187 QVIDR 191
>gi|383317431|ref|YP_005378273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
gi|379044535|gb|AFC86591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
Length = 209
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 114/191 (59%), Gaps = 12/191 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ + V +++A++++L+ +P I+LYINS G G
Sbjct: 27 DIYSRLLKERVIFLVGEVNDQVANVLIAQMLFLESENPDKDIHLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +KC+V T+ VG A A LLL AG KGKRF +P++++MI QP +
Sbjct: 78 VVTAGLAIYDTMQYIKCDVSTMCVGQACSAASLLLMAGAKGKRFSLPNSRVMIHQPSGGA 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + R L ++ HTG E + + + R M + AKE+G+ID
Sbjct: 138 RG--QATDIEIQAQEILYLRRKLNQIYVDHTGQPLEKIERDMERDRFMSAETAKEYGLID 195
Query: 292 KVL-WRGQETI 301
+VL R ET+
Sbjct: 196 EVLDRRATETV 206
>gi|313680148|ref|YP_004057887.1| ATP-dependent clp protease proteolytic subunit clpp [Oceanithermus
profundus DSM 14977]
gi|313152863|gb|ADR36714.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oceanithermus
profundus DSM 14977]
Length = 194
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V +VA++++L+ +P I LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGTPIDSQVANTIVAQMLFLEAQNPNQEIKLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ +K V T+ VG A M LLAAG G+R+ +PHA++MI QP +
Sbjct: 69 DVYAGLAIYDTMQYVKSPVATIVVGMAASMGAFLLAAGEAGQRYALPHARVMIHQPWGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A++ + ++ L +LLAKHTG E V R + M + A+++G++D
Sbjct: 129 QG--QATDIAIQAEQILKSKKLLNELLAKHTGQPVEKVEADSDRDFWMTADEARDYGLVD 186
Query: 292 KVLWR 296
+V+ R
Sbjct: 187 RVIAR 191
>gi|332288867|ref|YP_004419719.1| ATP-dependent Clp protease proteolytic subunit [Gallibacterium
anatis UMN179]
gi|330431763|gb|AEC16822.1| ATP-dependent Clp protease proteolytic subunit [Gallibacterium
anatis UMN179]
Length = 195
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 108/187 (57%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ + + L+VA+L++L+ +P I LYINS G G
Sbjct: 19 DIYSRLLKERVIFLNGQVEDNMANLIVAQLLFLEAENPDEDINLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LLA G GKRF +PHA+IMI QP
Sbjct: 70 VVTAGMAIYDTMQFIKPDVRTLCMGQACSMGAFLLAGGAAGKRFALPHARIMIHQPLGGY 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + +DTL + LA HTG E V + R M ++ AKE+G+ID
Sbjct: 130 RG--QASDIQIHAQEILKIKDTLNQRLAFHTGQPLEVVERDTDRDNFMSAQAAKEYGLID 187
Query: 292 KVLWRGQ 298
+VL Q
Sbjct: 188 EVLTHRQ 194
>gi|163851839|ref|YP_001639882.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens PA1]
gi|218530631|ref|YP_002421447.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens CM4]
gi|240139003|ref|YP_002963478.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens AM1]
gi|254561598|ref|YP_003068693.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens DM4]
gi|418060066|ref|ZP_12697994.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens DSM 13060]
gi|226706461|sp|A9W5F5.1|CLPP_METEP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763796|sp|B7KNT0.1|CLPP_METC4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|163663444|gb|ABY30811.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium extorquens PA1]
gi|218522934|gb|ACK83519.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium extorquens CM4]
gi|240008975|gb|ACS40201.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Methylobacterium extorquens AM1]
gi|254268876|emb|CAX24837.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Methylobacterium extorquens DM4]
gi|373566384|gb|EHP92385.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens DSM 13060]
Length = 208
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ L+VA+L++L+ +PK I YINS G G
Sbjct: 28 DIYSRLLRERIIFLTGPVEDQGASLIVAQLLFLEAENPKKEISFYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++C V T+ VG A M LLLAAG G RF +P+A+IM+ QP
Sbjct: 79 VVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLAAGEAGHRFALPNARIMVHQPSGGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+LI A+E + L ++ KHTG E + + + R M + AKEFG+ID
Sbjct: 139 QG--QATDILIHAREIEALKKRLNEIYVKHTGREYETIHQALERDNFMTADAAKEFGLID 196
Query: 292 KVLWR 296
+L +
Sbjct: 197 DILHK 201
>gi|196230686|ref|ZP_03129547.1| Endopeptidase Clp [Chthoniobacter flavus Ellin428]
gi|196225027|gb|EDY19536.1| Endopeptidase Clp [Chthoniobacter flavus Ellin428]
Length = 228
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 13/184 (7%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V ++A+L++LQ D K I +YINS G G
Sbjct: 33 DIYSRLLKDRIIFLGTAIDDGVANSIIAQLLFLQMEDGKKDINIYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V+T +G A M +LLAAGTKGKR+ +P++ IMI Q +
Sbjct: 84 SVTAGLAIYDTMQFLTCDVNTYCIGMAASMGAVLLAAGTKGKRYALPNSDIMIHQVSGGA 143
Query: 232 SGLLPASDVLIRAKEAMVN-RDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G ASDV R E M + L+ +LAKHTG ++E V R Y+M + AK +G++
Sbjct: 144 QG--TASDVE-RTVEFMFKLKKRLIHILAKHTGKTDEQVKTDSDRDYYMSADEAKAYGLV 200
Query: 291 DKVL 294
D+V+
Sbjct: 201 DEVV 204
>gi|428770773|ref|YP_007162563.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685052|gb|AFZ54519.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 196
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + +VA+L+ L+ DP+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVTDELANSLVAQLLLLEAEDPEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G I+DT+ Q+K +V T+ VG A M LL+AG KGKR +P+++IMI QP +
Sbjct: 68 SVSAGLGIFDTMNQIKPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L +A HTG + + + R + M + A+++G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKKQLNHYMASHTGQPLDKIEEDTERDFFMSAEEARDYGLID 185
Query: 292 KVLWRGQ 298
+V+ R Q
Sbjct: 186 RVVIRSQ 192
>gi|17231175|ref|NP_487723.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75909809|ref|YP_324105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|21759070|sp|Q8YQX8.1|CLPP2_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|17132816|dbj|BAB75382.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75703534|gb|ABA23210.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 232
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ AV +VA+L++L D + I LYINS G G
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPG---------G 95
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL AGTKGKR +P ++IMI QP +
Sbjct: 96 SVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGA 155
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + + L +LLA HTG E + R + M + AK +G+ID
Sbjct: 156 QG--QAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLID 213
Query: 292 KVLWR 296
+V+ R
Sbjct: 214 QVISR 218
>gi|260438109|ref|ZP_05791925.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
crossotus DSM 2876]
gi|292809590|gb|EFF68795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
crossotus DSM 2876]
Length = 194
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + +VVA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSANIVVAQLLFLEAEDPGKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LL+ GTKGKRF +P+A+IMI QP S
Sbjct: 70 SVTAGMAIYDTMNYIKSDVSTICIGMAASMGAFLLSGGTKGKRFALPNAEIMIHQPSGGS 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G+ ASD+ I A + + + L ++LAK+TG + + + R +M ++ A E+G+ID
Sbjct: 130 RGM--ASDMKIVADQILKTKQKLNEILAKNTGKPIDVIERDTDRDNYMTAQEALEYGLID 187
Query: 292 KVL 294
++
Sbjct: 188 SII 190
>gi|294101895|ref|YP_003553753.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
gi|293616875|gb|ADE57029.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
Length = 193
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + VVA+L++L+ DP I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGQEIDDPIANTVVAQLLFLESEDPDKDIHLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ +K V T+ +G A MA +LLA G GKR +P+A++MI QP +
Sbjct: 69 VISSGLAIYDTMQYIKSPVSTICIGQAASMAAVLLAGGAPGKRIALPNARVMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + R+ + +L KHTG + + + R ++M + A E+ +ID
Sbjct: 129 HG--QATDIEIHAKEILKIREKINDILVKHTGQTRKRIKADTDRDFYMSAAEALEYSIID 186
Query: 292 KVL 294
KV+
Sbjct: 187 KVI 189
>gi|428320528|ref|YP_007118410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428244208|gb|AFZ09994.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 229
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L+YL DP+ + +YINS G G
Sbjct: 42 DIYSRLLRERIVFLGTPVTDEVADSIVAQLLYLDAEDPEKDVQMYINSPG---------G 92
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q++ +V T+ G A M LL AG GKR +P ++IMI QP +
Sbjct: 93 SVTAGMAIYDTMQQIRPDVVTICYGLAASMGAFLLTAGAHGKRMSLPSSRIMIHQPLGGA 152
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++ L +LLA HTG E + R + M + AK +G++D
Sbjct: 153 QG--QAVDIEIQAKEILYHKRKLNQLLAHHTGQPIEKLEADTERDFFMSAEEAKNYGLVD 210
Query: 292 KVLWR 296
+V+ +
Sbjct: 211 RVIAK 215
>gi|427721125|ref|YP_007069119.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427353561|gb|AFY36285.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 197
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++G + + ++A ++YL DP IYLYINS G GM + G
Sbjct: 27 LYRERIIFLGRDIDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG---------GMVTSG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AI+DT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP + G
Sbjct: 78 LAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
ASD+ I A+E + R L + A+ TG + + K + R + M + AKE+G+ID+V+
Sbjct: 136 ASDIEIEAREILRIRHQLNGIYAEKTGQTIAKIEKDMDRDFFMSAAEAKEYGLIDRVI 193
>gi|443315652|ref|ZP_21045132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442784746|gb|ELR94606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 201
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L+VA++++L+ DP+ IYLY+NS G G
Sbjct: 17 DIYSRLLRERIIFLGQEVTSDSANLIVAQMLFLEAEDPEKDIYLYVNSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ VG A M LLAAG KGKR +P+A+IMI QP +
Sbjct: 68 SVTAGLGIFDTMNHIRPDVCTICVGLAASMGSFLLAAGKKGKRMSLPNARIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L LAK+TG S E +T R + + +A E+G+ID
Sbjct: 128 QG--QATDIEIQAKEILYLKGLLNGALAKNTGQSLEKITADTERDFFLSPHQAMEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|338733855|ref|YP_004672328.1| ATP-dependent Clp protease proteolytic subunit 2 [Simkania
negevensis Z]
gi|336483238|emb|CCB89837.1| ATP-dependent Clp protease proteolytic subunit 2 [Simkania
negevensis Z]
Length = 199
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+IG + V VVA+L++L+ DPK I +YINS G G
Sbjct: 19 DIYSRLLKDRIVFIGTEINDQVANAVVAQLIFLRAEDPKKDISIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ S G AIYDT+ + +++T +G A + LLL AGTKGKR+ + H+++MI QP
Sbjct: 70 IISAGLAIYDTMRFLGVDINTYCIGQAASLGALLLCAGTKGKRYALTHSRMMIHQPIGGI 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G ++D+ I+A+E + ++ L K++A+HTG E + + R ++M + A ++G+ID
Sbjct: 130 TG--SSADIHIQAQEILYMKNALAKIIAEHTGQPLEKIIEDSERDFYMGPQDAVKYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVV 190
>gi|15611797|ref|NP_223448.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
J99]
gi|308184578|ref|YP_003928711.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SJM180]
gi|385219046|ref|YP_005780521.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Gambia94/24]
gi|385223847|ref|YP_005783773.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2017]
gi|385231696|ref|YP_005791615.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2018]
gi|386746052|ref|YP_006219269.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HUP-B14]
gi|386755807|ref|YP_006229024.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan18]
gi|420412371|ref|ZP_14911500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4228]
gi|420417125|ref|ZP_14916230.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4044]
gi|420422141|ref|ZP_14921219.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4110]
gi|420423786|ref|ZP_14922857.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-4]
gi|420425490|ref|ZP_14924550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-5]
gi|420428804|ref|ZP_14927839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-17]
gi|420432285|ref|ZP_14931300.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-16]
gi|420434067|ref|ZP_14933072.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24]
gi|420436085|ref|ZP_14935082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-27]
gi|420438820|ref|ZP_14937794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-29]
gi|420440597|ref|ZP_14939552.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-30]
gi|420442369|ref|ZP_14941308.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-36]
gi|420443801|ref|ZP_14942728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-41]
gi|420445514|ref|ZP_14944425.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-42]
gi|420448944|ref|ZP_14947819.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-44]
gi|420452118|ref|ZP_14950967.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-6]
gi|420453627|ref|ZP_14952463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-8]
gi|420457142|ref|ZP_14955960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-16]
gi|420462197|ref|ZP_14960982.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-3]
gi|420463658|ref|ZP_14962434.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-4]
gi|420468970|ref|ZP_14967698.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-10]
gi|420472401|ref|ZP_14971092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-18]
gi|420474308|ref|ZP_14972984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-19]
gi|420475769|ref|ZP_14974438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-21]
gi|420477221|ref|ZP_14975880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-23]
gi|420479360|ref|ZP_14978009.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-34]
gi|420480832|ref|ZP_14979474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-1]
gi|420482367|ref|ZP_14981004.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-2]
gi|420484153|ref|ZP_14982779.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-3]
gi|420485833|ref|ZP_14984451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4]
gi|420487503|ref|ZP_14986107.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-8]
gi|420489282|ref|ZP_14987877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-11]
gi|420490982|ref|ZP_14989564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-13]
gi|420497793|ref|ZP_14996353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25]
gi|420499920|ref|ZP_14998472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-26]
gi|420502671|ref|ZP_15001208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-41]
gi|420506623|ref|ZP_15005138.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-74]
gi|420507833|ref|ZP_15006342.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24b]
gi|420509416|ref|ZP_15007918.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24c]
gi|420511328|ref|ZP_15009815.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-1b]
gi|420512788|ref|ZP_15011271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-2b]
gi|420514511|ref|ZP_15012982.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-3b]
gi|420516331|ref|ZP_15014794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4c]
gi|420518217|ref|ZP_15016669.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4d]
gi|420519766|ref|ZP_15018206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-5b]
gi|420521285|ref|ZP_15019716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-8b]
gi|420523039|ref|ZP_15021460.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-11b]
gi|420524814|ref|ZP_15023221.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-13b]
gi|420528160|ref|ZP_15026552.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25c]
gi|420530028|ref|ZP_15028413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25d]
gi|420533251|ref|ZP_15031612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M1]
gi|420534829|ref|ZP_15033177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M2]
gi|420536536|ref|ZP_15034878.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M3]
gi|420538330|ref|ZP_15036657.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M4]
gi|420540066|ref|ZP_15038383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M5]
gi|420541729|ref|ZP_15040037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M6]
gi|420543247|ref|ZP_15041539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M9]
gi|421711906|ref|ZP_16151247.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R030b]
gi|6685330|sp|Q9ZL50.1|CLPP_HELPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4155294|gb|AAD06311.1| ATP-DEPENDENT PROTEASE, PROTEOLYTIC SUBUNIT [Helicobacter pylori
J99]
gi|308060498|gb|ADO02394.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SJM180]
gi|317014204|gb|ADU81640.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Gambia94/24]
gi|325996073|gb|ADZ51478.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2018]
gi|325997669|gb|ADZ49877.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2017]
gi|384552301|gb|AFI07249.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HUP-B14]
gi|384562065|gb|AFI02531.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan18]
gi|393028029|gb|EJB29117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4228]
gi|393034956|gb|EJB36006.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4044]
gi|393038659|gb|EJB39693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4110]
gi|393040388|gb|EJB41406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-5]
gi|393041508|gb|EJB42524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-4]
gi|393046463|gb|EJB47443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-17]
gi|393047444|gb|EJB48418.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-16]
gi|393050482|gb|EJB51442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24]
gi|393050572|gb|EJB51530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-27]
gi|393055752|gb|EJB56665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-30]
gi|393056420|gb|EJB57332.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-29]
gi|393058306|gb|EJB59198.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-36]
gi|393060001|gb|EJB60875.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-41]
gi|393062072|gb|EJB62931.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-42]
gi|393064373|gb|EJB65211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-44]
gi|393068836|gb|EJB69635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-6]
gi|393069376|gb|EJB70173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-8]
gi|393073968|gb|EJB74733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-16]
gi|393079061|gb|EJB79795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-3]
gi|393079140|gb|EJB79873.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-4]
gi|393085745|gb|EJB86425.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-10]
gi|393088889|gb|EJB89533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-18]
gi|393089444|gb|EJB90084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-19]
gi|393091635|gb|EJB92262.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-21]
gi|393093871|gb|EJB94486.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-23]
gi|393095602|gb|EJB96206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-34]
gi|393095953|gb|EJB96552.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-1]
gi|393099601|gb|EJC00183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-2]
gi|393101020|gb|EJC01593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-3]
gi|393102080|gb|EJC02646.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-8]
gi|393103968|gb|EJC04531.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4]
gi|393106122|gb|EJC06667.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-11]
gi|393106442|gb|EJC06986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-13]
gi|393114072|gb|EJC14590.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25]
gi|393116128|gb|EJC16638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-74]
gi|393117686|gb|EJC18187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24b]
gi|393119812|gb|EJC20302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-1b]
gi|393120842|gb|EJC21331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24c]
gi|393122401|gb|EJC22875.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4d]
gi|393124630|gb|EJC25098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4c]
gi|393125645|gb|EJC26098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-5b]
gi|393127872|gb|EJC28317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-8b]
gi|393129037|gb|EJC29476.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-11b]
gi|393131085|gb|EJC31509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-13b]
gi|393134055|gb|EJC34470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25c]
gi|393136357|gb|EJC36748.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25d]
gi|393137712|gb|EJC38095.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M1]
gi|393141469|gb|EJC41834.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M2]
gi|393143044|gb|EJC43389.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M4]
gi|393144184|gb|EJC44528.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M3]
gi|393146283|gb|EJC46612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M5]
gi|393148349|gb|EJC48673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M6]
gi|393149154|gb|EJC49466.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-26]
gi|393151893|gb|EJC52195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-41]
gi|393156657|gb|EJC56920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-3b]
gi|393157851|gb|EJC58112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-2b]
gi|393159302|gb|EJC59555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M9]
gi|407211398|gb|EKE81266.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R030b]
Length = 195
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 70 VITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + + +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 130 QG--QASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLQK 192
>gi|78183646|ref|YP_376080.1| peptidase S14, ClpP [Synechococcus sp. CC9902]
gi|124013821|sp|Q3B0U1.1|CLPP2_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78167940|gb|ABB25037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 207
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 115/194 (59%), Gaps = 12/194 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + AV + +VA++++L+ DP+ I +Y+NS G G
Sbjct: 24 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q+ +V T+ G A M LL+ GTKGKR +P+A+IMI QP +
Sbjct: 75 SVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+AKE + ++TL LLA+HTG + +++ R Y + A E+G+ID
Sbjct: 135 QG--QAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLID 192
Query: 292 KVL-WRGQETIMAE 304
+V+ G E I+ +
Sbjct: 193 RVVDSSGDEGIVTD 206
>gi|440682480|ref|YP_007157275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428679599|gb|AFZ58365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 201
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++ L+VA+L++L DP+ IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L LA+HTG E + + R + M A+E+G+ID
Sbjct: 128 QG--QATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAQEYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|339007073|ref|ZP_08639648.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
gi|338776282|gb|EGP35810.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
Length = 195
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V VVA+L++LQ DP I +YINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LL AG KGKR+ +P+++IMI QP +
Sbjct: 72 SITAGMAIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIMIHQPLGGA 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + R+ L + A+ TG E + K R + ++ AKE+G+ID
Sbjct: 132 QG--QASDIEIAAKRIIKMREHLNGIYAERTGQPYERIAKDTDRDNFLSAQAAKEYGLID 189
Query: 292 KVLWR 296
+V+ R
Sbjct: 190 EVITR 194
>gi|197302444|ref|ZP_03167499.1| hypothetical protein RUMLAC_01172 [Ruminococcus lactaris ATCC
29176]
gi|197298342|gb|EDY32887.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus lactaris ATCC 29176]
Length = 193
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V TV +G A M LL+ G KGKRF +P+A+IMI QP +
Sbjct: 70 SVTAGMAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGAKGKRFALPNAEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R TL +LA +TG E + R M + AKE+G+ID
Sbjct: 130 QG--QATEIQIAAEHILRTRKTLNSILAANTGKPLEVIQTDTERDNFMSAAEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|449461681|ref|XP_004148570.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Cucumis sativus]
gi|449522109|ref|XP_004168070.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Cucumis sativus]
Length = 243
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ I P+ +VVA+L++L+ +P PI +Y+NS G G
Sbjct: 52 DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPTKPISMYLNSPG---------G 102
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ ++T+ +G A MA LLLAAG KG+R +P+A IMI QP
Sbjct: 103 AVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGY 162
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A D+ I K+ + D L +L +KHT S E + K + R Y M AKEFG+ID
Sbjct: 163 SG--QAKDMTIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIID 220
Query: 292 KVL 294
+V+
Sbjct: 221 EVI 223
>gi|419538375|ref|ZP_14077733.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
90-3]
gi|419539983|ref|ZP_14079226.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z163]
gi|419545413|ref|ZP_14084317.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2553]
gi|419548526|ref|ZP_14087147.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2685]
gi|419553494|ref|ZP_14091731.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2692]
gi|419555151|ref|ZP_14093255.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2698]
gi|419556647|ref|ZP_14094627.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
84-2]
gi|419560556|ref|ZP_14098196.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
86119]
gi|419562618|ref|ZP_14100124.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1091]
gi|419566976|ref|ZP_14104219.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1148]
gi|419573882|ref|ZP_14110666.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1891]
gi|419585477|ref|ZP_14121530.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
202/04]
gi|419587901|ref|ZP_14123770.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
67-8]
gi|419593793|ref|ZP_14128997.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9854]
gi|419595883|ref|ZP_14130968.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23336]
gi|419600679|ref|ZP_14135429.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23344]
gi|419603459|ref|ZP_14138009.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
151-9]
gi|419604516|ref|ZP_14138980.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9853]
gi|419614505|ref|ZP_14148286.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H56]
gi|419616077|ref|ZP_14149730.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z156]
gi|380518026|gb|EIA44128.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z163]
gi|380518081|gb|EIA44182.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
90-3]
gi|380522334|gb|EIA48022.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2553]
gi|380527365|gb|EIA52755.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2685]
gi|380528656|gb|EIA53899.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2692]
gi|380530561|gb|EIA55629.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2698]
gi|380534497|gb|EIA59281.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
84-2]
gi|380536913|gb|EIA61503.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
86119]
gi|380540547|gb|EIA64849.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1091]
gi|380544994|gb|EIA68992.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1148]
gi|380550548|gb|EIA74196.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1891]
gi|380561525|gb|EIA84451.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
67-8]
gi|380562019|gb|EIA84912.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
202/04]
gi|380568895|gb|EIA91353.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9854]
gi|380572687|gb|EIA94888.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23336]
gi|380578721|gb|EIB00549.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
151-9]
gi|380579883|gb|EIB01660.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9853]
gi|380582709|gb|EIB04328.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23344]
gi|380592651|gb|EIB13521.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H56]
gi|380596177|gb|EIB16879.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z156]
Length = 194
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + + +VA+L++L+ DP+ IYLYINS G G
Sbjct: 18 DIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPQKDIYLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GF+IYDT+ +K +V T+ +G A M LL+ GT+GKRF +P+++IMI QP +
Sbjct: 69 VITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTEGKRFALPNSRIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L +LAK+T + K R + M ++ AKE+G+ID
Sbjct: 129 RG--QATDIEIQAKEILRLKAILNDILAKNTKQKVAKIVKDTERDFFMSAQEAKEYGLID 186
Query: 292 KVLWR 296
KVL +
Sbjct: 187 KVLEK 191
>gi|303257392|ref|ZP_07343405.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium 1_1_47]
gi|302859749|gb|EFL82827.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium 1_1_47]
Length = 209
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R+V++ P+ LVVA+L++L+ +P I LYI+S G G
Sbjct: 27 DIYSRLLRDRVVFLVGPVTDQSANLVVAQLLFLESENPDKDISLYIDSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G +IYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 78 SVYAGLSIYDTMQFIKPDVSTICLGMAASMGAFLLAAGAKGKRFALPNSRIMIHQPSGGT 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G A+D+ I+AKE + R L +L++HTG S E + R M S +A E+G+ID
Sbjct: 138 NG--TAADIEIQAKEILELRSRLNTILSEHTGQSIEKIAVDTERDNFMSSAQAVEYGIID 195
Query: 292 KVLWRGQETIM 302
V + E I+
Sbjct: 196 GVFRKRSEQII 206
>gi|73663232|ref|YP_302013.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|418576800|ref|ZP_13140932.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|124013830|sp|Q49VZ2.1|CLPP_STAS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72495747|dbj|BAE19068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|379324465|gb|EHY91611.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 194
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V +V++L++LQ D + IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKRF +P+A++MI QP +
Sbjct: 70 SVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A + R L ++LA+ TG S E + + R + + AK++G++D
Sbjct: 130 QG--QATEIEIAANHILKTRAKLNQILAERTGQSIEKIEQDTDRDNFLSAEEAKDYGLVD 187
Query: 292 KVL 294
+V+
Sbjct: 188 QVM 190
>gi|33862212|ref|NP_893773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|67460514|sp|Q7UZK7.1|CLPP3_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634430|emb|CAE20115.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 215
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V++ +VA+L++L+ DP I +YINS G G
Sbjct: 40 DIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDIQIYINSPG---------G 90
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ Q+ +V T+ G A M LL+ G KGKR +P+++IMI QP +
Sbjct: 91 SVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGA 150
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A ++ I+AKE + + TL LLAKHT S E + + R Y + A E+G+ID
Sbjct: 151 QG--QAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEEAVEYGLID 208
Query: 292 KVL 294
KV+
Sbjct: 209 KVI 211
>gi|420396617|ref|ZP_14895836.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1313]
gi|393013475|gb|EJB14651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1313]
Length = 195
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 70 VITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + + +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 130 QG--QASDIEIISNEILRLKSLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLEK 192
>gi|427736765|ref|YP_007056309.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
gi|427371806|gb|AFY55762.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
Length = 198
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++G + + ++A ++YL DP I+LYINS G G+ + G
Sbjct: 27 LARDRIIFLGDEVNDQIANEIIAIMLYLDSEDPGKDIFLYINSPG---------GVVTSG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K +V T+ +G A M LL GTKGKR +PH++IMI QP + G
Sbjct: 78 LAIYDTMQHIKSDVVTICLGLAASMGSFLLGGGTKGKRLALPHSRIMIHQPSGGTRG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I AKE + R L + A +TG S E + K + R + M + +AKE+G+IDKV+
Sbjct: 136 ATDIEIEAKEILRIRHQLNGIYANNTGQSLEKIEKDMDRDFFMSAEQAKEYGLIDKVI 193
>gi|331001370|ref|ZP_08324994.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parasutterella excrementihominis YIT 11859]
gi|329568629|gb|EGG50431.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parasutterella excrementihominis YIT 11859]
Length = 209
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R+V++ P+ LVVA+L++L+ +P I LYI+S G G
Sbjct: 27 DIYSRLLRDRVVFLVGPVTDQSANLVVAQLLFLESENPDKDISLYIDSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G +IYDT+ +K +V T+ +G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 78 SVYAGLSIYDTMQFIKPDVSTICLGMAASMGAFLLAAGAKGKRFALPNSRIMIHQPSGGT 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+G A+D+ I+AKE + R L +L++HTG S E + R M S +A E+G+ID
Sbjct: 138 NG--TAADIEIQAKEILELRSRLNTILSEHTGQSIEKIAVDTERDNFMSSAQAVEYGIID 195
Query: 292 KVLWRGQETIM 302
V + E I+
Sbjct: 196 GVFRKRSEQII 206
>gi|185177785|pdb|2ZL3|A Chain A, Crystal Structure Of H.Pylori Clpp S99a
gi|185177786|pdb|2ZL3|B Chain B, Crystal Structure Of H.Pylori Clpp S99a
gi|185177787|pdb|2ZL3|C Chain C, Crystal Structure Of H.Pylori Clpp S99a
gi|185177788|pdb|2ZL3|D Chain D, Crystal Structure Of H.Pylori Clpp S99a
gi|185177789|pdb|2ZL3|E Chain E, Crystal Structure Of H.Pylori Clpp S99a
gi|185177790|pdb|2ZL3|F Chain F, Crystal Structure Of H.Pylori Clpp S99a
gi|185177791|pdb|2ZL3|G Chain G, Crystal Structure Of H.Pylori Clpp S99a
gi|185177792|pdb|2ZL3|H Chain H, Crystal Structure Of H.Pylori Clpp S99a
gi|185177793|pdb|2ZL3|I Chain I, Crystal Structure Of H.Pylori Clpp S99a
gi|185177794|pdb|2ZL3|J Chain J, Crystal Structure Of H.Pylori Clpp S99a
gi|185177795|pdb|2ZL3|K Chain K, Crystal Structure Of H.Pylori Clpp S99a
gi|185177796|pdb|2ZL3|L Chain L, Crystal Structure Of H.Pylori Clpp S99a
gi|185177797|pdb|2ZL3|M Chain M, Crystal Structure Of H.Pylori Clpp S99a
gi|185177798|pdb|2ZL3|N Chain N, Crystal Structure Of H.Pylori Clpp S99a
gi|185177799|pdb|2ZL4|A Chain A, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177801|pdb|2ZL4|B Chain B, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177803|pdb|2ZL4|C Chain C, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177805|pdb|2ZL4|D Chain D, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177807|pdb|2ZL4|E Chain E, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177809|pdb|2ZL4|F Chain F, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177811|pdb|2ZL4|G Chain G, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177813|pdb|2ZL4|H Chain H, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177815|pdb|2ZL4|I Chain I, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177817|pdb|2ZL4|J Chain J, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177819|pdb|2ZL4|K Chain K, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177821|pdb|2ZL4|L Chain L, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177823|pdb|2ZL4|M Chain M, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177825|pdb|2ZL4|N Chain N, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 71 VITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + + +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 131 QG--QASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLQK 193
>gi|169334562|ref|ZP_02861755.1| hypothetical protein ANASTE_00965 [Anaerofustis stercorihominis DSM
17244]
gi|169259279|gb|EDS73245.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerofustis stercorihominis DSM 17244]
Length = 193
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 12/195 (6%)
Query: 102 NEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTG 161
NE R + D+ S LL RI+++ + V LVVAE+++L+ + + I LYINS G
Sbjct: 10 NEGRAERSY-DIYSRLLKDRIIFLSGEINDDVANLVVAEMLFLESQNSEKDIQLYINSPG 68
Query: 162 TTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAK 221
G + G AIYDT+ +KC+V T+ +G A M LLA G KGKR +P ++
Sbjct: 69 ---------GSVTAGMAIYDTMNYIKCDVSTICIGMAASMGAFLLACGEKGKRIALPSSE 119
Query: 222 IMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDS 281
IMI QP G +SDV I AK + R+ + K+L+K TG + + + K R M +
Sbjct: 120 IMIHQPLGGFQG--QSSDVEIHAKRLLKTREDINKILSKRTGKTLKTIEKDTDRDNFMSA 177
Query: 282 RRAKEFGVIDKVLWR 296
+ A E+G+IDKV+ +
Sbjct: 178 KEAMEYGLIDKVIEK 192
>gi|33866183|ref|NP_897742.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8102]
gi|67460509|sp|Q7U5Q2.1|CLPP3_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33639158|emb|CAE08164.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
WH 8102]
Length = 200
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 103/174 (59%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K EV T+ VG A M LLAAGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP-LGGTSRRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + ++ L + L+ +G S + + K R Y + + AK++G+ID+V+
Sbjct: 141 EIEAREILRMKEMLNRSLSDMSGQSFDKIEKDTDRDYFLSAEEAKDYGLIDRVI 194
>gi|332981496|ref|YP_004462937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
gi|332699174|gb|AEE96115.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
Length = 194
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 112/183 (61%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ + A LVVA++++L+ DP I+LYINS G G
Sbjct: 19 DIYSRLLKERIVFLDGEVDDATASLVVAQMLFLESEDPDKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ +G A M LLAAG KGKR+ +P+++I+I QP +
Sbjct: 70 SVTAGFAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRYALPNSEILIHQPMGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D++I A++ + + L ++L++ TG E + K R + M ++ AKE+G++D
Sbjct: 130 RG--QATDIMIHAEQIVRIKRRLNEILSERTGQPYEKIEKDTDRDFFMSAQEAKEYGIVD 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|374301124|ref|YP_005052763.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
gi|332554060|gb|EGJ51104.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
Length = 206
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 12/188 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ + L+ A+L++L+ DP IY+YINS G G
Sbjct: 21 DIYSRLLRDRIILLGYPIDDHIAGLICAQLLFLESEDPDKEIYMYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C V T+ +G A M LL++GTKG RF +P+++I+I QP
Sbjct: 72 SVTAGMAIYDTMGYISCPVSTLCIGQAASMGAFLLSSGTKGMRFSLPNSRILIHQPMGGF 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A+E + R L ++LA++TG + + R Y M ++ A E+G+ID
Sbjct: 132 QG--QASDIDIHAREILRMRADLNRILAENTGKDLAQIERDTDRDYFMSAQEALEYGLID 189
Query: 292 KVLW-RGQ 298
K++ RG+
Sbjct: 190 KIMVSRGK 197
>gi|334118044|ref|ZP_08492134.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333460029|gb|EGK88639.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 197
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 106/188 (56%), Gaps = 11/188 (5%)
Query: 107 DTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDD 166
DT ++ L RI+++G + + ++A ++YL D I LYINS G
Sbjct: 17 DTQWINIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDSGKDIILYINSPG----- 71
Query: 167 GESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQ 226
GM S G AI+DT+ +K +V T+ VG A M LLAAG KGKR +PH++IMI Q
Sbjct: 72 ----GMVSAGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGAKGKRLALPHSRIMIHQ 127
Query: 227 PRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKE 286
P + G A+D+ I AKE + R L + AK+TG E + K + R Y M ++ AKE
Sbjct: 128 PSGGTRG--QATDIQIEAKEILRLRHELNNIYAKNTGKPIEKIEKDMDRDYFMSAQEAKE 185
Query: 287 FGVIDKVL 294
+G+ID+V+
Sbjct: 186 YGLIDRVI 193
>gi|399023733|ref|ZP_10725787.1| protease subunit of ATP-dependent protease [Chryseobacterium sp.
CF314]
gi|398082262|gb|EJL73020.1| protease subunit of ATP-dependent protease [Chryseobacterium sp.
CF314]
Length = 228
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 125/234 (53%), Gaps = 21/234 (8%)
Query: 68 VNRPSNSG--TLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYI 125
V NSG T Y+ +Y L +P +E E R + D+ S L+ RI+++
Sbjct: 12 VKHLGNSGLVTDQYMGMYGPTNL--TPYIME------ERRLNVAQMDVFSRLMMDRIIFL 63
Query: 126 GMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQ 185
G + V +V A+L++L+ DP I +YINS G G G IYDT+
Sbjct: 64 GTGIDDQVANIVTAQLLFLESADPSKDIQIYINSPG---------GSVYAGLGIYDTMQI 114
Query: 186 MKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAK 245
+K +V T+ G A M +LL AG KGKR + H+++MI QP + G+ ASD+ I +
Sbjct: 115 IKPDVATICTGIAASMGAVLLVAGEKGKRSALKHSRVMIHQPSGGAQGV--ASDMEINLR 172
Query: 246 EAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQE 299
E + + L ++A+H+G + E+V K+ R Y M S AK +G++D+VL R +E
Sbjct: 173 EMLKLKQELYDIIAEHSGQTYEWVEKSSDRDYWMTSEEAKNYGMVDEVLQRSKE 226
>gi|333375817|ref|ZP_08467617.1| ATP-dependent Clp protease, protease subunit [Kingella kingae ATCC
23330]
gi|332969605|gb|EGK08623.1| ATP-dependent Clp protease, protease subunit [Kingella kingae ATCC
23330]
Length = 205
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 125/219 (57%), Gaps = 26/219 (11%)
Query: 80 LDIYDS---PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTEL 136
LDI ++ PT++ + ER+ D+ S LL RI+++ P+ L
Sbjct: 2 LDIQNNTLIPTVIEQSGRGERAF------------DIYSRLLKERIIFLVGPVNDQTANL 49
Query: 137 VVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVG 196
VVA++++L+ +P IY YINS G G + G +IYDT+ +K +V T+ +G
Sbjct: 50 VVAQMLFLESENPDKDIYFYINSPG---------GSVTAGMSIYDTMKFIKPDVQTLCLG 100
Query: 197 AAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGL-LPASDVLIRAKEAMVNRDTLV 255
A M LL+AGTKGKRF +P++++MI QP L S GL ASD+ I A+E + ++ L
Sbjct: 101 QAASMGAFLLSAGTKGKRFALPNSRVMIHQP-LISGGLGGQASDIEIHARELLKLKEKLN 159
Query: 256 KLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
++LA+HTG + V + R M ++ A E+G+IDKV+
Sbjct: 160 QMLAEHTGKTLAEVERDTDRDNFMSAQEAMEYGLIDKVI 198
>gi|336113414|ref|YP_004568181.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347750878|ref|YP_004858443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
gi|335366844|gb|AEH52795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347583396|gb|AEO99662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G + V+ +V++L++L+ +P+ IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVSNSIVSQLLFLEAENPEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M +LL AGTKGKR+ +P++++MI QP +
Sbjct: 70 SVTAGLAIYDTMQIIKPDVQTICVGMAASMGSVLLTAGTKGKRYALPNSEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I AK + R L K+L+ HTG E + + R M + +AKE+G+ID
Sbjct: 130 QG--QATEIEIAAKHILYTRAKLNKILSDHTGQPIEVIERDTDRDNFMSAEKAKEYGLID 187
Query: 292 KVLWR 296
++ +
Sbjct: 188 HIMTK 192
>gi|15645413|ref|NP_207587.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
26695]
gi|108563204|ref|YP_627520.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HPAG1]
gi|207108488|ref|ZP_03242650.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HPKX_438_CA4C1]
gi|2493736|sp|P56156.1|CLPP_HELPY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|185177747|pdb|2ZL0|A Chain A, Crystal Structure Of H.Pylori Clpp
gi|185177748|pdb|2ZL0|B Chain B, Crystal Structure Of H.Pylori Clpp
gi|185177749|pdb|2ZL0|C Chain C, Crystal Structure Of H.Pylori Clpp
gi|185177750|pdb|2ZL0|D Chain D, Crystal Structure Of H.Pylori Clpp
gi|185177751|pdb|2ZL0|E Chain E, Crystal Structure Of H.Pylori Clpp
gi|185177752|pdb|2ZL0|F Chain F, Crystal Structure Of H.Pylori Clpp
gi|185177753|pdb|2ZL0|G Chain G, Crystal Structure Of H.Pylori Clpp
gi|185177754|pdb|2ZL0|H Chain H, Crystal Structure Of H.Pylori Clpp
gi|185177755|pdb|2ZL0|I Chain I, Crystal Structure Of H.Pylori Clpp
gi|185177756|pdb|2ZL0|J Chain J, Crystal Structure Of H.Pylori Clpp
gi|185177757|pdb|2ZL0|K Chain K, Crystal Structure Of H.Pylori Clpp
gi|185177758|pdb|2ZL0|L Chain L, Crystal Structure Of H.Pylori Clpp
gi|185177759|pdb|2ZL0|M Chain M, Crystal Structure Of H.Pylori Clpp
gi|185177760|pdb|2ZL0|N Chain N, Crystal Structure Of H.Pylori Clpp
gi|185177761|pdb|2ZL2|A Chain A, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177762|pdb|2ZL2|B Chain B, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177763|pdb|2ZL2|C Chain C, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177764|pdb|2ZL2|D Chain D, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177765|pdb|2ZL2|E Chain E, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177766|pdb|2ZL2|F Chain F, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177767|pdb|2ZL2|G Chain G, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177768|pdb|2ZL2|H Chain H, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177769|pdb|2ZL2|I Chain I, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177770|pdb|2ZL2|J Chain J, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177771|pdb|2ZL2|K Chain K, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177772|pdb|2ZL2|L Chain L, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177773|pdb|2ZL2|M Chain M, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177774|pdb|2ZL2|N Chain N, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|2313923|gb|AAD07842.1| ATP-dependent clp protease proteolytic component (clpP)
[Helicobacter pylori 26695]
gi|107836977|gb|ABF84846.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori HPAG1]
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 71 VITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + + +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 131 QG--QASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLQK 193
>gi|406708292|ref|YP_006758644.1| endopeptidase Clp [alpha proteobacterium HIMB59]
gi|406654068|gb|AFS49467.1| endopeptidase Clp [alpha proteobacterium HIMB59]
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ L+ A+L++L+ +P+ PI LYINS G G
Sbjct: 19 DIFSRLLRERIIFLTGPIDDQTASLICAQLLFLESENPEEPISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G A+YDT+ ++C VHTV +G A L+LA+G G R+ +PHAKIMI QP
Sbjct: 70 LVTAGLAMYDTIQYIRCPVHTVCIGQASSAGSLILASGKSGHRYALPHAKIMIHQPSGGF 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG A+D+ I A+E + + L ++ KHT S + K + R D A +FG+ID
Sbjct: 130 SG--QATDIKIHAEEILKTKKRLNEIYQKHTNISINEIEKAMERDRFFDPEEALKFGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVI 190
>gi|325662430|ref|ZP_08151036.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|331086220|ref|ZP_08335302.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|325471264|gb|EGC74488.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|330406379|gb|EGG85893.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 193
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++VA+L++L+ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASVIVAQLLFLEAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V T +G A M LLA G KGKR+ +P+A+IMI QP +
Sbjct: 70 SVTAGMAIYDTMQFIKCDVSTTCIGMAASMGAFLLAGGAKGKRYALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A + R L K+LA++TG + R +M + AK +G+ID
Sbjct: 130 QG--QATDIKIVADHILKTRTKLNKILAENTGQDLSVIEVDTERDNYMSAEEAKAYGLID 187
Query: 292 KVLWR 296
+V+ +
Sbjct: 188 EVIIK 192
>gi|254779232|ref|YP_003057337.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
B38]
gi|254001143|emb|CAX29101.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Helicobacter pylori B38]
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 71 VITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + + +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 131 QG--QASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLQK 193
>gi|445496993|ref|ZP_21463848.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Janthinobacterium sp. HH01]
gi|444786988|gb|ELX08536.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Janthinobacterium sp. HH01]
Length = 208
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ + L+VA+L++L+ +P I LYINS G G
Sbjct: 33 DIYSRLLKERVIFMVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ +K +V T+ G A M LLAAG KGKRF +P+++IMI QP S
Sbjct: 84 SVSAGLAIFDTMQFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLPNSRIMIHQPSGGS 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G+ ASD+ I+AKE + R L ++A+ TG S E + K R M + A E+G+ID
Sbjct: 144 QGM--ASDIEIQAKEILYLRHRLNSIMAERTGQSVEQIAKDTDRDRFMSAEEAVEYGLID 201
Query: 292 KVL 294
K+L
Sbjct: 202 KML 204
>gi|421783030|ref|ZP_16219482.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
plymuthica A30]
gi|407754736|gb|EKF64867.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
plymuthica A30]
Length = 193
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 117/211 (55%), Gaps = 23/211 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ +Q ERS D+ S LL RI+++ + A+ ELV A+L++L+
Sbjct: 5 PTVVEQSSQGERSF------------DIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
+P+ PI+LYINS G G + GFAIYDT+ + +VHT+ +G A M L
Sbjct: 53 AENPEKPIHLYINSPG---------GAITSGFAIYDTMRFINAQVHTLCMGTARSMGSFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
L AG G R +P+A + + QP G ASD+ I A+E + +++L A+H G+S
Sbjct: 104 LMAGEPGHRAALPNASLHVHQPLGGFQG--QASDIFIHAEEMRRTKKRVIRLYAEHCGHS 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
EE V + + R M + A E+G++D+VL R
Sbjct: 162 EEEVEQVLDRDRFMTADEAVEWGLVDRVLVR 192
>gi|421872665|ref|ZP_16304283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
gi|372458638|emb|CCF13832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
Length = 193
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V VVA+L++LQ DP I +YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LL AG KGKR+ +P+++IMI QP +
Sbjct: 70 SITAGMAIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + R+ L + A+ TG E + K R + ++ AKE+G+ID
Sbjct: 130 QG--QASDIEIAAKRIIKMREHLNGIYAERTGQPYERIAKDTDRDNFLSAQAAKEYGLID 187
Query: 292 KVLWR 296
+V+ R
Sbjct: 188 EVITR 192
>gi|208434705|ref|YP_002266371.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
G27]
gi|210134994|ref|YP_002301433.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
P12]
gi|217032887|ref|ZP_03438364.1| hypothetical protein HPB128_152g4 [Helicobacter pylori B128]
gi|298736497|ref|YP_003729023.1| ATP-dependent Clp protease, protease subunit [Helicobacter pylori
B8]
gi|383749543|ref|YP_005424646.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
ELS37]
gi|384897499|ref|YP_005772927.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Lithuania75]
gi|384898903|ref|YP_005774282.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F30]
gi|385220389|ref|YP_005781861.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
India7]
gi|385222230|ref|YP_005771363.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SouthAfrica7]
gi|385225257|ref|YP_005785182.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
83]
gi|385227027|ref|YP_005786951.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SNT49]
gi|410024019|ref|YP_006893272.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Rif1]
gi|410501787|ref|YP_006936314.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Rif2]
gi|410682306|ref|YP_006934708.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
26695]
gi|419417681|ref|ZP_13958093.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
P79]
gi|419418415|ref|ZP_13958741.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
NCTC 11637 = CCUG 17874]
gi|420399014|ref|ZP_14898225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1962]
gi|420403721|ref|ZP_14902907.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6261]
gi|420408931|ref|ZP_14908086.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4216]
gi|420410332|ref|ZP_14909475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4200]
gi|420413802|ref|ZP_14912924.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4099]
gi|420415169|ref|ZP_14914284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4053]
gi|420418737|ref|ZP_14917829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4076]
gi|420420065|ref|ZP_14919152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4161]
gi|420426786|ref|ZP_14925835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-9]
gi|420430592|ref|ZP_14929620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-20]
gi|420437210|ref|ZP_14936194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-28]
gi|420447144|ref|ZP_14946038.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-43]
gi|420450458|ref|ZP_14949319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-45]
gi|420455107|ref|ZP_14953937.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-14]
gi|420458636|ref|ZP_14957446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-26]
gi|420460296|ref|ZP_14959095.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-27]
gi|420465522|ref|ZP_14964288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-6]
gi|420467174|ref|ZP_14965929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-9]
gi|420470658|ref|ZP_14969367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-11]
gi|420492818|ref|ZP_14991392.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-15]
gi|420494310|ref|ZP_14992879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-16]
gi|420496090|ref|ZP_14994654.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-23]
gi|420501584|ref|ZP_15000128.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-30]
gi|420504447|ref|ZP_15002973.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-62]
gi|420526838|ref|ZP_15025239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-15b]
gi|420531369|ref|ZP_15029742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-28b]
gi|421710300|ref|ZP_16149657.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R018c]
gi|421713107|ref|ZP_16152438.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R32b]
gi|421715068|ref|ZP_16154386.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R036d]
gi|421716890|ref|ZP_16156198.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R037c]
gi|421718409|ref|ZP_16157708.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R038b]
gi|421719617|ref|ZP_16158901.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R046Wa]
gi|421721752|ref|ZP_16161026.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R055a]
gi|421723576|ref|ZP_16162830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R056a]
gi|444373992|ref|ZP_21173299.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
A45]
gi|116243140|sp|Q1CT76.2|CLPP_HELPH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706454|sp|B5Z7F6.1|CLPP_HELPG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|208432634|gb|ACI27505.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori G27]
gi|210132962|gb|ACJ07953.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori P12]
gi|216945381|gb|EEC24049.1| hypothetical protein HPB128_152g4 [Helicobacter pylori B128]
gi|298355687|emb|CBI66559.1| ATP-dependent Clp protease, protease subunit [Helicobacter pylori
B8]
gi|317009196|gb|ADU79776.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
India7]
gi|317011009|gb|ADU84756.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SouthAfrica7]
gi|317012604|gb|ADU83212.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Lithuania75]
gi|317178846|dbj|BAJ56634.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F30]
gi|332673403|gb|AEE70220.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
83]
gi|344331940|gb|AEN16970.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SNT49]
gi|380874289|gb|AFF20070.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
ELS37]
gi|384372478|gb|EIE28070.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
P79]
gi|384374159|gb|EIE29583.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
NCTC 11637 = CCUG 17874]
gi|393013243|gb|EJB14420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1962]
gi|393020887|gb|EJB22026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6261]
gi|393023093|gb|EJB24208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4216]
gi|393027363|gb|EJB28452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4099]
gi|393028645|gb|EJB29731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4200]
gi|393032637|gb|EJB33702.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4053]
gi|393033563|gb|EJB34626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4076]
gi|393037301|gb|EJB38337.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4161]
gi|393043743|gb|EJB44746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-9]
gi|393047289|gb|EJB48264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-20]
gi|393053524|gb|EJB54468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-28]
gi|393064117|gb|EJB64957.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-43]
gi|393067398|gb|EJB68210.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-45]
gi|393073457|gb|EJB74231.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-14]
gi|393076157|gb|EJB76911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-26]
gi|393077398|gb|EJB78147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-27]
gi|393081153|gb|EJB81876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-6]
gi|393084002|gb|EJB84699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-9]
gi|393086091|gb|EJB86770.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-11]
gi|393107257|gb|EJC07800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-15]
gi|393111111|gb|EJC11635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-16]
gi|393112401|gb|EJC12922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-23]
gi|393132143|gb|EJC32566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-15b]
gi|393137041|gb|EJC37428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-28b]
gi|393150390|gb|EJC50698.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-30]
gi|393154293|gb|EJC54576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-62]
gi|407210491|gb|EKE80370.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R018c]
gi|407215922|gb|EKE85760.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R036d]
gi|407216473|gb|EKE86310.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R32b]
gi|407219465|gb|EKE89280.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R037c]
gi|407220940|gb|EKE90745.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R046Wa]
gi|407221675|gb|EKE91479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R038b]
gi|407224213|gb|EKE93990.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R055a]
gi|407224599|gb|EKE94375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R056a]
gi|409893947|gb|AFV42005.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
26695]
gi|409895676|gb|AFV43598.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Rif1]
gi|409897338|gb|AFV45192.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Rif2]
gi|443621216|gb|ELT81655.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
A45]
Length = 195
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 70 VITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + + +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 130 QG--QASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLQK 192
>gi|72382719|ref|YP_292074.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL2A]
gi|124026440|ref|YP_001015555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL1A]
gi|115311347|sp|Q46JF7.1|CLPP2_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|72002569|gb|AAZ58371.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|123961508|gb|ABM76291.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 200
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 10/183 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ + L RI+++G + + +VA+++YL D PIYLYINS G G
Sbjct: 22 DIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K ++ T+ VG A M LL+AGTKGKR +PH++IMI QP L
Sbjct: 73 SVTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQP-LGG 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+ ASD+ I A+E + ++ L K +A+ TG + E + K R Y + + AK +G+ID
Sbjct: 132 TAQRQASDIEIEAREILRIKEMLNKSMAEMTGQTYEKIEKDTDRDYFLSAEEAKNYGLID 191
Query: 292 KVL 294
+V+
Sbjct: 192 RVI 194
>gi|371777403|ref|ZP_09483725.1| ATP-dependent Clp protease proteolytic subunit [Anaerophaga sp.
HS1]
Length = 230
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 119/218 (54%), Gaps = 18/218 (8%)
Query: 80 LDIYDSPT-LMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVV 138
LD Y S T SP +E E + + D+ S L+ RI+++G+P+ V ++
Sbjct: 22 LDKYTSITNSYISPTIIE------ERQLNVASMDVFSRLMMDRIIFLGVPIDDYVANIIQ 75
Query: 139 AELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAA 198
A+L+YL +D I +Y N+ G G G IYDT+ + ++ T+ G A
Sbjct: 76 AQLLYLDSVDSTKDISIYFNTPG---------GSVHSGLGIYDTMQFISSDIQTICTGMA 126
Query: 199 IGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLL 258
M +LL AGTKGKR + H+++MI QP + G A+D+ I A+E + + L ++L
Sbjct: 127 ASMGAVLLTAGTKGKRSALKHSRVMIHQPMGGAQG--QATDIEITAREILKLKKELYEIL 184
Query: 259 AKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
A+HTGNS + V K R Y M + AK++G+ID+VL R
Sbjct: 185 AEHTGNSYKKVEKDADRDYWMTAEEAKKYGMIDEVLVR 222
>gi|242062408|ref|XP_002452493.1| hypothetical protein SORBIDRAFT_04g026880 [Sorghum bicolor]
gi|241932324|gb|EES05469.1| hypothetical protein SORBIDRAFT_04g026880 [Sorghum bicolor]
Length = 309
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV I P+ LVVA+L++L+ +P P++LYINS G G
Sbjct: 100 DIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLKPVHLYINSPG---------G 150
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++C V T+ +G A M LLLAAG G+R +P+A++MI QP +
Sbjct: 151 VVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGA 210
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + RD L K+ KHT + + + + R MD A+++G+ID
Sbjct: 211 QGQ--ATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPEEARDWGLID 268
Query: 292 KVL 294
+V+
Sbjct: 269 EVI 271
>gi|306820816|ref|ZP_07454440.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|402310280|ref|ZP_10829246.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
gi|304551134|gb|EFM39101.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|400368732|gb|EJP21739.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
Length = 195
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 12/188 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + L+VA+L++L+ DP I+ YINS G G
Sbjct: 19 DIYSRLLKERIIFLGDEVNDQTASLIVAQLLFLESEDPDKDIHFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ VG A M LL++G KGKR+ +P+++IMI QP +
Sbjct: 70 SITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLSSGKKGKRYALPNSEIMIHQPLGGT 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + R L +++A+ TG S E + K R + M + AK++G+ID
Sbjct: 130 KG--QATDIQIHAERIIRLRKKLNEIMAEQTGKSIEIINKDTERDFFMSAEEAKDYGLID 187
Query: 292 KV-LWRGQ 298
V L RG+
Sbjct: 188 SVMLGRGK 195
>gi|15605439|ref|NP_220225.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis D/UW-3/CX]
gi|76789446|ref|YP_328532.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis A/HAR-13]
gi|166154048|ref|YP_001654166.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 434/Bu]
gi|166154923|ref|YP_001653178.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|237803136|ref|YP_002888330.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis B/Jali20/OT]
gi|237805057|ref|YP_002889211.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis B/TZ1A828/OT]
gi|255311535|ref|ZP_05354105.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 6276]
gi|255317836|ref|ZP_05359082.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 6276s]
gi|255349098|ref|ZP_05381105.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 70]
gi|255503635|ref|ZP_05382025.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 70s]
gi|255507314|ref|ZP_05382953.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis D(s)2923]
gi|301335249|ref|ZP_07223493.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2tet1]
gi|339625452|ref|YP_004716931.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2c]
gi|376282716|ref|YP_005156542.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis A2497]
gi|385240245|ref|YP_005808087.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/9768]
gi|385241171|ref|YP_005809012.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/11222]
gi|385242096|ref|YP_005809936.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/11023]
gi|385243023|ref|YP_005810862.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/9301]
gi|385245706|ref|YP_005814529.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/150]
gi|385246631|ref|YP_005815453.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/11074]
gi|386263062|ref|YP_005816341.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis Sweden2]
gi|389858401|ref|YP_006360643.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis F/SW4]
gi|389859277|ref|YP_006361518.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis E/SW3]
gi|389860153|ref|YP_006362393.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis F/SW5]
gi|6831513|sp|O84712.1|CLPP2_CHLTR RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|92087003|sp|Q3KKY8.1|CLPP2_CHLTA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|3329161|gb|AAC68301.1| CLP Protease [Chlamydia trachomatis D/UW-3/CX]
gi|76167976|gb|AAX50984.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis A/HAR-13]
gi|165930036|emb|CAP03519.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis 434/Bu]
gi|165930911|emb|CAP06473.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|231273357|emb|CAX10272.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231274370|emb|CAX11165.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis B/Jali20/OT]
gi|289525750|emb|CBJ15231.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis Sweden2]
gi|296435322|gb|ADH17500.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/150]
gi|296436250|gb|ADH18424.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/9768]
gi|296437179|gb|ADH19349.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/11222]
gi|296438110|gb|ADH20271.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/11074]
gi|296439039|gb|ADH21192.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/11023]
gi|297140611|gb|ADH97369.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/9301]
gi|339460676|gb|AEJ77179.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2c]
gi|371908746|emb|CAX09378.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis A2497]
gi|380249473|emb|CCE14769.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis F/SW5]
gi|380250348|emb|CCE13880.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis F/SW4]
gi|380251226|emb|CCE12991.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis E/SW3]
gi|438690644|emb|CCP49901.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis A/7249]
gi|438691729|emb|CCP49003.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis A/5291]
gi|438693102|emb|CCP48104.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis A/363]
gi|440525634|emb|CCP50885.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis K/SotonK1]
gi|440526521|emb|CCP52005.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/8200/07]
gi|440527418|emb|CCP52902.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis D/SotonD1]
gi|440528310|emb|CCP53794.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis D/SotonD5]
gi|440529201|emb|CCP54685.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis D/SotonD6]
gi|440530091|emb|CCP55575.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/SotonE4]
gi|440530991|emb|CCP56475.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/SotonE8]
gi|440531882|emb|CCP57392.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis F/SotonF3]
gi|440532775|emb|CCP58285.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/SotonG1]
gi|440533669|emb|CCP59179.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis Ia/SotonIa1]
gi|440534563|emb|CCP60073.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis Ia/SotonIa3]
gi|440535458|emb|CCP60968.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/Bour]
gi|440536345|emb|CCP61858.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/795]
gi|440537239|emb|CCP62753.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L1/440/LN]
gi|440538128|emb|CCP63642.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L1/1322/p2]
gi|440539018|emb|CCP64532.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L1/115]
gi|440539907|emb|CCP65421.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L1/224]
gi|440540798|emb|CCP66312.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2/25667R]
gi|440541686|emb|CCP67200.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L3/404/LN]
gi|440542574|emb|CCP68088.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/UCH-2]
gi|440543465|emb|CCP68979.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/Canada2]
gi|440544356|emb|CCP69870.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/LST]
gi|440545246|emb|CCP70760.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/Ams1]
gi|440546136|emb|CCP71650.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/CV204]
gi|440914398|emb|CCP90815.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/Ams2]
gi|440915288|emb|CCP91705.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/Ams3]
gi|440916180|emb|CCP92597.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/Canada1]
gi|440917073|emb|CCP93490.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/Ams4]
gi|440917964|emb|CCP94381.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/Ams5]
Length = 203
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 13/190 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV IG + + V+A+L++L DP I ++INS G G
Sbjct: 19 DIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPTKDIQIFINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V+T +G A M LLL+AGTKGKR+ +PH+++MI Q PS
Sbjct: 70 YITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQ---PS 126
Query: 232 SGLLPAS-DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G++ S D+ ++A E + + L +LA+ TG S E + + R + M + A +G+I
Sbjct: 127 GGIIGTSADIQLQAAEILTLKKHLSNILAECTGQSVEKIIEDSERDFFMGAEEAIAYGLI 186
Query: 291 DKVLWRGQET 300
DKV+ +ET
Sbjct: 187 DKVISSAKET 196
>gi|425432336|ref|ZP_18812902.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori GAM100Ai]
gi|410715169|gb|EKQ72600.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori GAM100Ai]
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 71 VITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + + +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 131 QG--QASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLQK 193
>gi|440684795|ref|YP_007159590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428681914|gb|AFZ60680.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 197
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 103/174 (59%), Gaps = 11/174 (6%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + + ++A ++YL DP I+LYINS G GM + G AIY
Sbjct: 31 RIIFLGRDVDDEIANQIIAIMLYLDSDDPGKDIFLYINSPG---------GMVTSGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP + G ASD+
Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRG--QASDI 139
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + R L ++ +TG + + K + R + M ++ AKE+G+ID+V+
Sbjct: 140 EIEAREIIRIRHQLNQIYVDNTGQTLAKIEKDMDRDFFMSAQEAKEYGLIDRVI 193
>gi|291288695|ref|YP_003505511.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Denitrovibrio
acetiphilus DSM 12809]
gi|290885855|gb|ADD69555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Denitrovibrio
acetiphilus DSM 12809]
Length = 195
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + +VA++++L+ DP I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGSQVESGIANSIVAQMLFLESDDPDKDIHLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S+G AI+DT+ +K +V T+ +G A MA +LLAAGTKGKR+ +P+A++MI Q +
Sbjct: 71 SVSDGLAIFDTMKYIKPDVSTICIGQAASMAAVLLAAGTKGKRYAVPNARVMIHQVMGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L +L TG S E + K R Y M + AK +G+ID
Sbjct: 131 QG--QAADIEIQAKEILRIKKILNDILTDATGKSYEKIEKDSDRDYFMSAPEAKAYGIID 188
Query: 292 KVL 294
V+
Sbjct: 189 DVI 191
>gi|16332068|ref|NP_442796.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451816220|ref|YP_007452672.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|2493737|sp|Q59993.1|CLPP2_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|1001377|dbj|BAA10867.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|407960292|dbj|BAM53532.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451782189|gb|AGF53158.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 226
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V + +VA+L++L DP+ I LYINS G G
Sbjct: 39 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPG---------G 89
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL+ G KGKR +P ++IMI QP +
Sbjct: 90 SVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGA 149
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A ++ I+A+E + +D L +L +HTG E + + R + M + AKE+G+ID
Sbjct: 150 QG--QAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLID 207
Query: 292 KVLWR 296
+V+ R
Sbjct: 208 QVISR 212
>gi|115311350|sp|Q3M726.2|CLPP3_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
Length = 214
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ AV +VA+L++L D + I LYINS G G
Sbjct: 27 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL AGTKGKR +P ++IMI QP +
Sbjct: 78 SVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGA 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A D+ I+A+E + + L +LLA HTG E + R + M + AK +G+ID
Sbjct: 138 QG--QAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLID 195
Query: 292 KVLWR 296
+V+ R
Sbjct: 196 QVISR 200
>gi|295112117|emb|CBL28867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes
bacterium SGP1]
Length = 195
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G ++ V +VA+L++L+ DP I+LYINS G G
Sbjct: 21 DIYSRLLKDRIVFLGTQVMDDVANSIVAQLLFLESEDPDKDIHLYINSPG---------G 71
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K V T+ VG A MA +LL+ G +GKR +P+A++MI QP +
Sbjct: 72 SVTAGMAIYDTMQYIKSPVSTICVGMAASMAAILLSGGARGKRLALPNAEVMIHQPLGGT 131
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I A+ + R + +LA+HTG E V + R M ++ A ++G+ID
Sbjct: 132 SG--QASDIEIHARNILNTRKRMNAILARHTGQDVEKVAQDTDRDNFMTAQEALDYGLID 189
Query: 292 KVL 294
+++
Sbjct: 190 RII 192
>gi|428319265|ref|YP_007117147.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428242945|gb|AFZ08731.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 202
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L DP+ IYLY+NS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYLNSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ +G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMNHIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L + LA HTG + + R + M + AK++G++D
Sbjct: 128 QG--QATDIEIQAKEILYHKRRLNEHLANHTGQPLSRIEEDTERDFFMSAEEAKDYGLVD 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|300023469|ref|YP_003756080.1| endopeptidase Clp [Hyphomicrobium denitrificans ATCC 51888]
gi|299525290|gb|ADJ23759.1| Endopeptidase Clp [Hyphomicrobium denitrificans ATCC 51888]
Length = 217
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 115/201 (57%), Gaps = 13/201 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DLPS LL RI+++ P+ + + +L++L+ +PK I +YINS G G
Sbjct: 28 DLPSRLLKERIIFVTGPVEDHMAASICMQLLFLESENPKKEISMYINSPG---------G 78
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K V T+ +G A M LLL AG K RF +P+A+IM+ QP
Sbjct: 79 VVTAGMAIYDTMQFVKPPVATLCIGQAASMGSLLLCAGAKDMRFALPNARIMVHQPSGGF 138
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ A++ + + L + KHTG S E + KT+ R Y M + +A++FG+ID
Sbjct: 139 SG--QASDIERHAEDIIKMKRRLNETYVKHTGQSYEMIEKTLDRDYFMTADQARDFGIID 196
Query: 292 KVLWRGQETIMA--EVAPPEE 310
KVL E +A E+ P+E
Sbjct: 197 KVLESRDEVDVAALEIKSPKE 217
>gi|67923459|ref|ZP_00516936.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67854694|gb|EAM49976.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 262
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L++L DP+ I LYINS G G
Sbjct: 75 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPG---------G 125
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL+ GTKGKR +P ++IMI QP +
Sbjct: 126 SVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGA 185
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A ++ I+AKE + + L +LA+HTG + + R + M ++ A ++G+ID
Sbjct: 186 QG--QAVEIEIQAKEILYIKKRLNDMLAEHTGQPFDTIAADTERDFFMSAQEAVDYGLID 243
Query: 292 KVLWR 296
KV+ R
Sbjct: 244 KVISR 248
>gi|427707093|ref|YP_007049470.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359598|gb|AFY42320.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 197
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++G + + ++A ++YL DP IYLYINS G GM + G
Sbjct: 27 LYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG---------GMVTSG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K +V T+ VG A M LL AGTKGKR +PH++IMI QP + G
Sbjct: 78 LAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGTKGKRLALPHSRIMIHQPSGGTRG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I AKE + R L + +++TG + K + R + M ++ AKE+G+ID+V+
Sbjct: 136 ATDIEIEAKEILRIRHQLNNIYSQNTGQPLAKIEKDMDRDFFMSAQEAKEYGLIDRVI 193
>gi|78188367|ref|YP_378705.1| peptidase S14, ClpP [Chlorobium chlorochromatii CaD3]
gi|90101406|sp|Q3ATL3.1|CLPP_CHLCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78170566|gb|ABB27662.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
chlorochromatii CaD3]
Length = 225
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L++A+L++L+ DP+ IY+YINS G G
Sbjct: 44 DIFSRLLRERIIFLGTGIDEHVAGLIMAQLIFLESEDPERDIYIYINSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G IYDT+ ++ E+ TV VG A M LLA+G KGKR +PH++IMI QP +
Sbjct: 95 SVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLPHSRIMIHQPSGGA 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +D++I+A+E R L +LLAKHTG E V + R M+ + A E+G+ID
Sbjct: 155 QG--QETDIVIQAREIEKIRRLLEELLAKHTGQPVEKVREDSERDRWMNPQEALEYGLID 212
Query: 292 KVLWR 296
+ +
Sbjct: 213 AIFEK 217
>gi|416405032|ref|ZP_11687843.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|357261367|gb|EHJ10638.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 262
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G P+ V + +VA+L++L DP+ I LYINS G G
Sbjct: 75 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPG---------G 125
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL+ GTKGKR +P ++IMI QP +
Sbjct: 126 SVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGA 185
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A ++ I+AKE + + L +LA+HTG + + R + M ++ A ++G+ID
Sbjct: 186 QG--QAVEIEIQAKEILYIKKRLNDMLAEHTGQPFDTIAADTERDFFMSAQEAVDYGLID 243
Query: 292 KVLWR 296
KV+ R
Sbjct: 244 KVISR 248
>gi|268680774|ref|YP_003305205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurospirillum deleyianum DSM 6946]
gi|268618805|gb|ACZ13170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurospirillum deleyianum DSM 6946]
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + V +VA+L++L+ DP+ IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGEINDVVASSIVAQLLFLEAEDPEKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GF+IYDT+ +K ++ T+ +G A M LL+AGTKGKR+ +P+A+IMI QP +
Sbjct: 71 VITSGFSIYDTMNYIKPDISTICIGQAASMGAFLLSAGTKGKRYALPNARIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + + L ++LAK+ + K R + M + + E+G+ID
Sbjct: 131 QG--QATDIEIQAKEILRMKQVLNEILAKNCNQKLPKIIKDTERDFFMSAEESCEYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLNK 193
>gi|160945107|ref|ZP_02092333.1| hypothetical protein FAEPRAM212_02626 [Faecalibacterium prausnitzii
M21/2]
gi|158442838|gb|EDP19843.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Faecalibacterium prausnitzii M21/2]
Length = 229
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 110/186 (59%), Gaps = 12/186 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+ + + LVVA+L+YL+ DP I LYINS G G
Sbjct: 50 DIFSRLLNDRIIVLSEDVNDTTASLVVAQLLYLEGQDPDKDISLYINSPG---------G 100
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL-- 229
S G AI+DT+ +KC+V T+ +G A M LLA+GTKGKRF +P+A+IMI QP +
Sbjct: 101 SISAGMAIHDTMQYIKCDVSTICMGMAASMGAFLLASGTKGKRFALPNAEIMIHQPLIGG 160
Query: 230 -PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
+D+ I A+ + RD + ++L+++TG E + + R ++ +++AKE+G
Sbjct: 161 QGGGLSGQTTDIKIHAEHMVYIRDKMNRMLSEYTGQPLEKIQQDTERDNYLTAQQAKEYG 220
Query: 289 VIDKVL 294
+ID+V+
Sbjct: 221 LIDEVI 226
>gi|365154330|ref|ZP_09350763.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter sp.
10_1_50]
gi|363650168|gb|EHL89259.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter sp.
10_1_50]
Length = 196
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + + +VA+L++L+ DP IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVMLSGEIEDGMAASIVAQLLFLEAEDPDKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GF+IYDT+ +K +V T+ +G A M LL+ GT GKR+ +P+++IMI QP +
Sbjct: 71 VITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTPGKRYALPNSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L +LAK+TG + K R + M S AKE+G++D
Sbjct: 131 RG--QATDIEIQAREILRLKEILNGILAKNTGQKLSKIVKDTERDFFMSSAEAKEYGLVD 188
Query: 292 KVLWR 296
K+L +
Sbjct: 189 KILEK 193
>gi|123969397|ref|YP_001010255.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126697184|ref|YP_001092070.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|123199507|gb|ABM71148.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126544227|gb|ABO18469.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 214
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 17/213 (7%)
Query: 84 DSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMY 143
++ T+ A P +E+S D+ S LL RI+++G + V++ +VA+L++
Sbjct: 19 NNKTIAAVPTVIEQSGR------GERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLF 72
Query: 144 LQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMAC 203
L+ DP+ I +YINS G G + G AIYDT+ Q+ +V T+ G A M
Sbjct: 73 LEAEDPEKDIQIYINSPG---------GSVTAGMAIYDTMQQISPDVVTICFGVAASMGA 123
Query: 204 LLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 263
LL+ G KGKR +P+++IMI QP + G A ++ I+AKE + + TL LLA+HTG
Sbjct: 124 FLLSGGAKGKRLALPNSRIMIHQPLGGAQG--QAVEIEIQAKEILFLKKTLNSLLAEHTG 181
Query: 264 NSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWR 296
E + + R Y + A E+G+IDKV+ +
Sbjct: 182 QPLEKINEDTERDYFLSPSEAVEYGLIDKVIKK 214
>gi|145219256|ref|YP_001129965.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
gi|189082462|sp|A4SDA4.1|CLPP_PROVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145205420|gb|ABP36463.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
Length = 225
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L++A+L++L+ DP I++Y+NS G G
Sbjct: 44 DIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPDRDIFIYVNSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G IYDT+ ++ +V TV VG A M LLA+G KGKR +PH++IMI QP +
Sbjct: 95 SVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQPSGGA 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G SD++I+A+E R L +++AKHTG + V + R MD+ A E+G+ID
Sbjct: 155 QG--QESDIIIQAREIEKIRRLLEEIMAKHTGKDVQQVREDSERDRWMDAGEALEYGIID 212
Query: 292 KVLWR 296
+V +
Sbjct: 213 QVFEK 217
>gi|295105645|emb|CBL03189.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Faecalibacterium prausnitzii SL3/3]
Length = 198
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 110/186 (59%), Gaps = 12/186 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+ + + LVVA+L+YL+ DP I LYINS G G
Sbjct: 19 DIFSRLLNDRIIVLSEDVNDTTASLVVAQLLYLEGQDPDKDISLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL-- 229
S G AI+DT+ +KC+V T+ +G A M LLA+GTKGKRF +P+A+IMI QP +
Sbjct: 70 SISAGMAIHDTMQYIKCDVSTICMGMAASMGAFLLASGTKGKRFALPNAEIMIHQPLIGG 129
Query: 230 -PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFG 288
+D+ I A+ + RD + ++L+++TG E + + R ++ +++AKE+G
Sbjct: 130 QGGGLSGQTTDIKIHAEHMVYIRDKMNRMLSEYTGQPLEKIQQDTERDNYLTAQQAKEYG 189
Query: 289 VIDKVL 294
+ID+V+
Sbjct: 190 LIDEVI 195
>gi|392427640|ref|YP_006468634.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
gi|391357603|gb|AFM43302.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
Length = 207
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 111/186 (59%), Gaps = 10/186 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V LVVA++++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGGIDDDVANLVVAQMLFLEAEDPEKDINLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ ++ +V T+ +G A M LLAAG KGKR +P+++++I QP +
Sbjct: 71 SITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLAAGAKGKRVALPNSEVLIHQPLIGG 130
Query: 232 SGLL-PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
GL A+++ I AK+ + + + ++LA TG E + + R Y+M + AKE+G++
Sbjct: 131 HGLSGQATEIEIHAKQLLRTKSKMNQILAAKTGQPLEKIERDTDRDYYMSAEEAKEYGLV 190
Query: 291 DKVLWR 296
D++L +
Sbjct: 191 DQILEK 196
>gi|335042770|ref|ZP_08535797.1| protease subunit of ATP-dependent Clp protease [Methylophaga
aminisulfidivorans MP]
gi|333789384|gb|EGL55266.1| protease subunit of ATP-dependent Clp protease [Methylophaga
aminisulfidivorans MP]
Length = 210
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ + LVVA+L++L+ +P I+LYINS G G
Sbjct: 33 DIFSRLLKERVIFLVGPVEDQMANLVVAQLLFLESENPDKDIHLYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K V T+ +G A M +LLA G +GKR+ +P+++IM+ QP
Sbjct: 84 AVTAGLAIYDTMQFIKPNVSTLCIGQAASMGAVLLAGGAEGKRYCLPNSRIMVHQPLGGF 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD I AKE + RD L +LAKHTG E + K R M+ +A E+G+ID
Sbjct: 144 QG--QASDFDIHAKEILSIRDRLNGILAKHTGQDIEAIRKDTDRDNFMNGEQAVEYGLID 201
Query: 292 KVL 294
VL
Sbjct: 202 SVL 204
>gi|78778230|ref|YP_394545.1| ATP-dependent Clp protease proteolytic subunit [Sulfurimonas
denitrificans DSM 1251]
gi|124015202|sp|Q30NX1.1|CLPP_SULDN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78498770|gb|ABB45310.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
denitrificans DSM 1251]
Length = 196
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + AV +VA++++L+ DP+ IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDIYFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ +V T+ VG A M LL++G KGKR+ +PHA+IMI QP +
Sbjct: 70 VVTAGMAIYDTMNYIRPDVATICVGQAASMGAFLLSSGAKGKRYALPHARIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L +LAK+ S + V K R M + +KE+G+ID
Sbjct: 130 QG--QATDIAIQAKEILRMKEELNAILAKNCSQSIKKVEKDTDRDNFMSAEESKEYGMID 187
Query: 292 KVLWR 296
+VL +
Sbjct: 188 EVLLK 192
>gi|269215646|ref|ZP_06159500.1| Clp protease [Slackia exigua ATCC 700122]
gi|269131133|gb|EEZ62208.1| Clp protease [Slackia exigua ATCC 700122]
Length = 255
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RIV++G + V +VVA+L++L+ DP+ I LYINS G G
Sbjct: 72 DIYSRLLNDRIVFLGDAIDDGVANIVVAQLLHLESSDPEKDISLYINSPG---------G 122
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYD + ++C+V TV +G A MA +L AAG GKRF+ P+++IMI QP S
Sbjct: 123 SVSAGLAIYDAMQFIRCDVSTVCLGMAASMASVLTAAGAPGKRFVTPNSQIMIHQPMGGS 182
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+D I A E RD L LLA HTG + E + R + + + AK +G++D
Sbjct: 183 GERTQQTDFDILANEMRKTRDRLEGLLATHTGKTVEQIHADSERDHWLTAEEAKAYGLVD 242
Query: 292 KVL 294
++
Sbjct: 243 DII 245
>gi|118474160|ref|YP_892812.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|424821464|ref|ZP_18246502.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
gi|118413386|gb|ABK81806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
fetus subsp. fetus 82-40]
gi|342328243|gb|EGU24727.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
Length = 196
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ + + A+ +VA++++L+ DP IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGEIEDAMASAIVAQMLFLEAEDPDKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GF+IYDT+ +K +V T+ +G A M LL+ GTKGKR+ +P+++IMI QP +
Sbjct: 71 VVTSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTKGKRYALPNSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L LAK+TG + K R + M + A E+G+ID
Sbjct: 131 RG--QATDIEIQAKEILRLKEVLNSTLAKNTGQKLAKIAKDTDRDFFMSAHEAAEYGLID 188
Query: 292 KVLWR 296
VL +
Sbjct: 189 NVLEK 193
>gi|342216862|ref|ZP_08709509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 375 str. F0436]
gi|341587752|gb|EGS31152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 375 str. F0436]
Length = 194
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + +L+VA+L++L+ DP I +YINS G G
Sbjct: 19 DIYSRLLKERIIFLSGEVNDVMADLIVAQLLFLESEDPDKDIQIYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S GFAIYDT+ +K +V T+ +G A M LLAAGT GKR+ +P+A IMI QP +
Sbjct: 70 SVSAGFAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGTIGKRYALPNADIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I A++ + R+ L ++L+ TG S E + R ++M + A ++G+ID
Sbjct: 130 QG--QASDIKIHAEKILKTRERLNRILSDRTGKSYEQIDLDTDRDFYMTADEAVDYGLID 187
Query: 292 KVL 294
KV+
Sbjct: 188 KVV 190
>gi|312128165|ref|YP_003993039.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor hydrothermalis 108]
gi|312134617|ref|YP_004001955.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor owensensis OL]
gi|312792981|ref|YP_004025904.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|344996808|ref|YP_004799151.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
gi|311774668|gb|ADQ04155.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor owensensis OL]
gi|311778184|gb|ADQ07670.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor hydrothermalis 108]
gi|312180121|gb|ADQ40291.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|343965027|gb|AEM74174.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
Length = 195
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + + L+VA+L++L+ DP IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ VG A M LLAAG KGKRF +P+++IMI QP
Sbjct: 71 SVTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + ++ + K+L++ TG E + + R + M + A ++G+ID
Sbjct: 131 RG--QATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEALKYGIID 188
Query: 292 KVLWR 296
KV+ R
Sbjct: 189 KVIER 193
>gi|222528715|ref|YP_002572597.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor bescii DSM 6725]
gi|312622971|ref|YP_004024584.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kronotskyensis 2002]
gi|222455562|gb|ACM59824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor bescii DSM 6725]
gi|312203438|gb|ADQ46765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kronotskyensis 2002]
Length = 195
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + + L+VA+L++L+ DP IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ GFAIYDT+ +K +V T+ VG A M LLAAG KGKRF +P+++IMI QP
Sbjct: 71 SVTAGFAIYDTMQYIKPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGV 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+ + ++ + K+L++ TG E + + R + M + A ++G+ID
Sbjct: 131 RG--QATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEALKYGIID 188
Query: 292 KVLWR 296
KV+ R
Sbjct: 189 KVIER 193
>gi|154148860|ref|YP_001405639.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
hominis ATCC BAA-381]
gi|166201810|sp|A7HZE8.1|CLPP_CAMHC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|153804869|gb|ABS51876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
hominis ATCC BAA-381]
Length = 195
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + V VVA+L++L+ DP IYLYINS G G
Sbjct: 18 DIYSRLLKDRIVMLSGEINDEVASSVVAQLLFLEAEDPDKDIYLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + GF+IYDT+ +K V T+ +G A M LL+ G KGKR+ +P+A+IMI QP +
Sbjct: 69 VVTSGFSIYDTMNYIKPAVSTICIGQAASMGAFLLSCGEKGKRYALPNARIMIHQPLGGA 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I KE + + TL K+LA+++G + K R ++M ++ A ++G+ID
Sbjct: 129 QG--QATDIEITTKEILRIKATLNKILAENSGQKLSKIEKDTDRDFYMSAQEAVKYGLID 186
Query: 292 KVLWR 296
KVL +
Sbjct: 187 KVLEK 191
>gi|325107894|ref|YP_004268962.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
gi|324968162|gb|ADY58940.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
Length = 215
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 11/188 (5%)
Query: 113 LPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGM 172
+ LLL RI+++ P+ A L+V +L+YLQ + ++LYINS G G
Sbjct: 34 IGDLLLDNRIIFLDGPIHDASANLIVMKLLYLQSENRHQDVHLYINSPG---------GS 84
Query: 173 ESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSS 232
+ AIYDT+ + C+V T VG A +L+A G KGKR+ +PH+K+MI QP
Sbjct: 85 VTATLAIYDTMQFLDCDVATYCVGLAASGGAVLMAGGAKGKRYSLPHSKMMIHQPFGQVG 144
Query: 233 GLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDK 292
G SD+ I+A+E + R+TL ++LA HTG E + K R ++ ++ AKE+G++D+
Sbjct: 145 G--QVSDIEIQAQEIINTRETLNQILADHTGQPIERIAKDTERDRYLTAKEAKEYGLVDE 202
Query: 293 VLWRGQET 300
V+ + ++T
Sbjct: 203 VVEKIKKT 210
>gi|237747781|ref|ZP_04578261.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacter
formigenes OXCC13]
gi|229379143|gb|EEO29234.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacter
formigenes OXCC13]
Length = 207
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ P++ L+VA+L++L+ +P I LYINS G G
Sbjct: 32 DIYSRLLKERIVFLVGPVMDQNANLIVAQLLFLESENPDKDISLYINSPG---------G 82
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 83 SVSAGMAIYDTMQFIKPQVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMIHQPSGGA 142
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R+ L +LA +TG S E V + R M + AK++G+ID
Sbjct: 143 QG--QATDIEIHAREILYLRERLNGILADNTGKSIEQVARDTERDNFMSANEAKDYGLID 200
Query: 292 KVLWR 296
VL +
Sbjct: 201 DVLSK 205
>gi|189500958|ref|YP_001960428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeobacteroides BS1]
gi|189496399|gb|ACE04947.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeobacteroides BS1]
Length = 228
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V L++A+L++L+ DP+ ++LYINS G G
Sbjct: 44 DIFSRLLRERIIFLGTPIDDHVASLLMAQLLFLESEDPERDVFLYINSPG---------G 94
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G +YDT+ ++ EV TV VG A M LLA G GKR +PH++IMI QP
Sbjct: 95 SVSAGLGVYDTIQYIRSEVSTVCVGMAASMGAFLLACGANGKRASLPHSRIMIHQPSGGV 154
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G +D+LI+A+E R L +++A H G E + + R M++ AK +G+ID
Sbjct: 155 QG--QETDILIQAREIEKIRKLLEEIMASHCGQDVEKIREDSERDRWMNAEEAKAYGIID 212
Query: 292 KVL 294
++
Sbjct: 213 QIF 215
>gi|409406436|ref|ZP_11254898.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum sp.
GW103]
gi|386434985|gb|EIJ47810.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum sp.
GW103]
Length = 208
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ P+ A+ L+VA+L++L+ +P I LYINS G G
Sbjct: 33 DIYSRLLKERIIFLVGPVNDAMANLIVAQLLFLESENPDKDISLYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AI+DT+ +K +V T+ G A M LLAAG KGKRF +P+++IMI QP +
Sbjct: 84 SVSAGMAIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGA 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I+A+E + R+ L +LA+ TG + E ++K R M + A E+G+ID
Sbjct: 144 QG--QASDIEIQAREILYLRERLNTILAEKTGRTVEQISKDTDRDNFMSAEAAAEYGLID 201
Query: 292 KVLWR 296
+VL +
Sbjct: 202 QVLTQ 206
>gi|170086161|ref|XP_001874304.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651856|gb|EDR16096.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 106/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++ + + + + L+VA+L++L+ D PI+LYINS G G
Sbjct: 60 DIFSRLLRERVIMLHGTIRDSDSTLIVAQLLFLEAEDSTKPIHLYINSPG---------G 110
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + +HT ++G A M LLLAAG KGKR +P+A IMI QP +
Sbjct: 111 SVTAGLAIYDTMQYVSSPIHTYSLGLAASMGSLLLAAGEKGKRHCLPNASIMIHQPSGGA 170
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
SG ASD+ I AKE + R L + +H G E + + R Y+M ++ A EFG++D
Sbjct: 171 SG--QASDIAIHAKEILRIRQVLTGIYQRHCGKDGESQAEALERDYYMTAQEAMEFGIVD 228
Query: 292 KVLWR 296
+L +
Sbjct: 229 GILEK 233
>gi|317495864|ref|ZP_07954227.1| Clp protease [Gemella morbillorum M424]
gi|316914041|gb|EFV35524.1| Clp protease [Gemella morbillorum M424]
Length = 212
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 116/210 (55%), Gaps = 23/210 (10%)
Query: 86 PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQ 145
PT++ +Q ER+ D+ S LL RI+ +G + V + ++L++L+
Sbjct: 5 PTVIEQTSQGERA------------YDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLE 52
Query: 146 WMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLL 205
D + IY YINS G G + GFAIYDT+ +KC+V T+ +G A M L
Sbjct: 53 AQDSEKDIYFYINSPG---------GSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFL 103
Query: 206 LAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNS 265
LAAGT GKR+ +P+A++MI QP + G A+++ I AK + R+ L K+LA TG +
Sbjct: 104 LAAGTIGKRYALPNAEVMIHQPLGGAQG--QATEIEIAAKHILRTREKLNKILADRTGQT 161
Query: 266 EEFVTKTIRRPYHMDSRRAKEFGVIDKVLW 295
+ + + R ++ + A +G++DKV++
Sbjct: 162 IKAIERDTERDNYLSAEEACAYGLVDKVMY 191
>gi|451940540|ref|YP_007461178.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
australis Aust/NH1]
gi|451899927|gb|AGF74390.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
australis Aust/NH1]
Length = 209
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 11/189 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI++I P+ + LV A+L++L+ +PK I LYINS G G
Sbjct: 27 DIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKAISLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ V T+ +G A M LLLAAG KG RF +P+A++M+ QP
Sbjct: 78 VVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLAAGAKGHRFALPNARVMVHQPSGGF 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ A++ + + L ++ +HTG S E + KT+ R + M + AK+FG++D
Sbjct: 138 QG--QASDIERHARDIIQMKQRLNQIYVQHTGQSYEIIEKTLDRDHFMTAEEAKQFGLVD 195
Query: 292 KVLWRGQET 300
V+ ET
Sbjct: 196 NVIQYRAET 204
>gi|375089682|ref|ZP_09736007.1| ATP-dependent Clp protease proteolytic subunit [Facklamia languida
CCUG 37842]
gi|374566529|gb|EHR37768.1| ATP-dependent Clp protease proteolytic subunit [Facklamia languida
CCUG 37842]
Length = 202
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 110/183 (60%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + P+ + V+A+L++L DP IYLYINS G G
Sbjct: 19 DIYSRLLKDRIVMLSGPVDDNMANSVIAQLLFLDAQDPDKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AI+DT+ +K +V T+ +G A MA +LLAAGTKGKRF +P+A++MI QP +
Sbjct: 70 SVTAGLAIFDTMNFIKADVQTIVIGMAASMASVLLAAGTKGKRFALPNAEVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R+ L ++L++ TG + + + R M + +AKE+G++D
Sbjct: 130 QG--QATEIEIAARHILKTRERLNQILSEATGQPLDVINRDTDRDNFMSADQAKEYGLVD 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVM 190
>gi|325264756|ref|ZP_08131485.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. D5]
gi|324030048|gb|EGB91334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. D5]
Length = 193
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++VA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDIQLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V TV +G A M LL+ G KGKRF +P+A+IMI QP +
Sbjct: 70 SVTSGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGKKGKRFALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R L ++LA++TG S + + R +M + AKE+G+ID
Sbjct: 130 QG--QATEIHIVAEHILKIRHKLNQILAENTGQSLDVIKVDTERDNYMSALEAKEYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|385243914|ref|YP_005811760.1| hypothetical protein CTDEC_0706 [Chlamydia trachomatis D-EC]
gi|385244794|ref|YP_005812638.1| hypothetical protein CTDLC_0706 [Chlamydia trachomatis D-LC]
gi|297748837|gb|ADI51383.1| hypothetical protein CTDEC_0706 [Chlamydia trachomatis D-EC]
gi|297749717|gb|ADI52395.1| hypothetical protein CTDLC_0706 [Chlamydia trachomatis D-LC]
Length = 209
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 13/190 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV IG + + V+A+L++L DP I ++INS G G
Sbjct: 25 DIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPTKDIQIFINSPG---------G 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V+T +G A M LLL+AGTKGKR+ +PH+++MI Q PS
Sbjct: 76 YITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQ---PS 132
Query: 232 SGLLPAS-DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G++ S D+ ++A E + + L +LA+ TG S E + + R + M + A +G+I
Sbjct: 133 GGIIGTSADIQLQAAEILTLKKHLSNILAECTGQSVEKIIEDSERDFFMGAEEAIAYGLI 192
Query: 291 DKVLWRGQET 300
DKV+ +ET
Sbjct: 193 DKVISSAKET 202
>gi|407691666|ref|YP_006816455.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
gi|407387723|gb|AFU18216.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
Length = 196
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++ + + L+VA+L++L+ DP+ IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKDIYLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ G A M LL+ G KGKRF +PHA++MI QP +
Sbjct: 70 VVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPHARVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L + +A+H+G E V R M + A E+G+ID
Sbjct: 130 RG--QATDIQIQAQEILKLKEMLTRRMAEHSGQPFEKVAADTERDNFMSAFEAAEYGLID 187
Query: 292 KVL 294
KVL
Sbjct: 188 KVL 190
>gi|258646880|ref|ZP_05734349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dialister
invisus DSM 15470]
gi|260404319|gb|EEW97866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dialister
invisus DSM 15470]
Length = 207
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 114/202 (56%), Gaps = 14/202 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ P+ +++A+ ++L+ DP I+ YINS G G
Sbjct: 19 DIYSRLLKDRIVFLDGPIDDHTANVIIAQFLFLEAEDPDKDIHFYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ ++ +V T+ +G+ MA +LL AG KGKR+ +PHA +MI QP +
Sbjct: 70 VVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTAGEKGKRYALPHASVMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I AKE + R L ++A H+G + + V K R M + A ++G+ID
Sbjct: 130 QG--QATDIAIHAKEIIRLRSELNGIIAAHSGQTLKTVMKDTERDNFMTADAALKYGLID 187
Query: 292 KVLWRGQETIMAEVAPPEEWDK 313
K+L R + +AE+ E K
Sbjct: 188 KILTRNE---LAELNGKSELSK 206
>gi|385270433|ref|YP_005813593.1| hypothetical protein [Chlamydia trachomatis A2497]
gi|347975573|gb|AEP35594.1| hypothetical protein CTO_0767 [Chlamydia trachomatis A2497]
Length = 209
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 13/190 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV IG + + V+A+L++L DP I ++INS G G
Sbjct: 25 DIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPTKDIQIFINSPG---------G 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V+T +G A M LLL+AGTKGKR+ +PH+++MI Q PS
Sbjct: 76 YITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQ---PS 132
Query: 232 SGLLPAS-DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G++ S D+ ++A E + + L +LA+ TG S E + + R + M + A +G+I
Sbjct: 133 GGIIGTSADIQLQAAEILTLKKHLSNILAECTGQSVEKIIEDSERDFFMGAEEAIAYGLI 192
Query: 291 DKVLWRGQET 300
DKV+ +ET
Sbjct: 193 DKVISSAKET 202
>gi|443315109|ref|ZP_21044619.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785291|gb|ELR95121.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 211
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 112/179 (62%), Gaps = 7/179 (3%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDG---ESVGME--SE 175
RI+++ P+ V +++ L+YL+ D PIYLYINS G G E+ G+ +
Sbjct: 32 RIIFLNQPVTMGVANSIISALLYLESEDNTKPIYLYINSLGDPVLAGMADETAGLSGITA 91
Query: 176 GFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLL 235
AIYDT +K EV T+ +G A+G+A +LL+AGTKGKR +P+A I + QP + + G
Sbjct: 92 SLAIYDTFQHIKSEVITICLGQAVGVAVMLLSAGTKGKRVSLPNAMITLMQPYVGTQG-- 149
Query: 236 PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ + +EA+ R+ ++++LA++TG S E + + + R +++ A+ +G+ID+VL
Sbjct: 150 QATDIQLSVQEALNKRNIMMQILAENTGQSVETLHRDMDRAFYLTPTEAQAYGLIDRVL 208
>gi|381400295|ref|ZP_09925271.1| ATP-dependent Clp protease proteolytic subunit [Kingella kingae
PYKK081]
gi|380834682|gb|EIC14511.1| ATP-dependent Clp protease proteolytic subunit [Kingella kingae
PYKK081]
Length = 205
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 125/219 (57%), Gaps = 26/219 (11%)
Query: 80 LDIYDS---PTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTEL 136
LDI ++ PT++ + ER+ D+ S LL RI+++ P+ L
Sbjct: 2 LDIQNNTLIPTVIEQSGRGERAF------------DIYSRLLKERIIFLVGPVNDQTANL 49
Query: 137 VVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVG 196
VVA++++L+ +P IY YINS G G + G +IYDT+ +K +V T+ +G
Sbjct: 50 VVAQMLFLESENPDKDIYFYINSPG---------GSVTAGMSIYDTMKFIKPDVQTLCLG 100
Query: 197 AAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGL-LPASDVLIRAKEAMVNRDTLV 255
A M LL+AGTKGKRF +P++++MI QP L S GL ASD+ I A+E + ++ L
Sbjct: 101 QAASMGAFLLSAGTKGKRFALPNSRVMIHQP-LISGGLGGQASDIEIHARELLKLKEKLN 159
Query: 256 KLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
++LA+HTG + V + R M ++ A E+G+IDKV+
Sbjct: 160 QMLAEHTGKTLAEVERDTDRDNFMSAQEAIEYGLIDKVI 198
>gi|373486607|ref|ZP_09577280.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
gi|372011468|gb|EHP12063.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
Length = 198
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL I+++G + +V +VA++++L+ DP I +YINS G G
Sbjct: 23 DIYSRLLKDNIIFLGTAIDDSVANAIVAQMLFLESEDPDKDIQIYINSPG---------G 73
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K ++ T +G M LLAAGTKGKRF +P+A+IMI QP +
Sbjct: 74 SVTAGLAIYDTMQFVKNDIVTYCIGQCASMGAHLLAAGTKGKRFALPNARIMIHQPSGGA 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I KE +D L +KHTG + + V K + R Y M + A E+G++D
Sbjct: 134 QG--QATEIEITYKEIQRLKDNLAGTFSKHTGQTLKKVMKDMDRDYFMSAEEAMEYGIVD 191
Query: 292 KVL 294
KVL
Sbjct: 192 KVL 194
>gi|188527362|ref|YP_001910049.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi470]
gi|217034159|ref|ZP_03439579.1| hypothetical protein HP9810_868g52 [Helicobacter pylori 98-10]
gi|308182950|ref|YP_003927077.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan4]
gi|384887561|ref|YP_005762072.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
52]
gi|384889426|ref|YP_005763728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori v225d]
gi|384892817|ref|YP_005766910.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Cuz20]
gi|384894168|ref|YP_005768217.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Sat464]
gi|384895926|ref|YP_005769915.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
35A]
gi|385216028|ref|YP_005775985.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F32]
gi|385217327|ref|YP_005778803.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F16]
gi|385228517|ref|YP_005788450.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Puno120]
gi|385230075|ref|YP_005789991.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Puno135]
gi|385249309|ref|YP_005777528.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F57]
gi|386751182|ref|YP_006224402.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi417]
gi|386752776|ref|YP_006225995.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi169]
gi|386754096|ref|YP_006227314.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi112]
gi|420395464|ref|ZP_14894691.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1124]
gi|420400395|ref|ZP_14899596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY3281]
gi|420404828|ref|ZP_14904008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6271]
gi|420406978|ref|ZP_14906148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6311]
gi|425789376|ref|YP_007017296.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik117]
gi|226706455|sp|B2UT37.1|CLPP_HELPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|188143602|gb|ACD48019.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi470]
gi|216943443|gb|EEC22899.1| hypothetical protein HP9810_868g52 [Helicobacter pylori 98-10]
gi|261839391|gb|ACX99156.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
52]
gi|297379992|gb|ADI34879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori v225d]
gi|308062114|gb|ADO04002.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Cuz20]
gi|308063422|gb|ADO05309.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Sat464]
gi|308065135|gb|ADO07027.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan4]
gi|315586542|gb|ADU40923.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
35A]
gi|317177376|dbj|BAJ55165.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F16]
gi|317180557|dbj|BAJ58343.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F32]
gi|317182104|dbj|BAJ59888.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F57]
gi|344334955|gb|AEN15399.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Puno120]
gi|344336513|gb|AEN18474.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Puno135]
gi|384557440|gb|AFH97908.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi417]
gi|384559034|gb|AFH99501.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi169]
gi|384560354|gb|AFI00821.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi112]
gi|393013900|gb|EJB15074.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1124]
gi|393017340|gb|EJB18493.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY3281]
gi|393023815|gb|EJB24929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6311]
gi|393024698|gb|EJB25808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6271]
gi|425627691|gb|AFX91159.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik117]
Length = 195
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 19 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 70 VITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + + +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 130 QG--QASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 187
Query: 292 KVLWR 296
KVL +
Sbjct: 188 KVLEK 192
>gi|167627759|ref|YP_001678259.1| ATP-dependent Clp protease proteolytic subunit [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|254876856|ref|ZP_05249566.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|189082458|sp|B0TZA5.1|CLPP_FRAP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167597760|gb|ABZ87758.1| Endopeptidase Clp [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|254842877|gb|EET21291.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++ + LV+A+L++L+ DP IY YINS G G
Sbjct: 22 DIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
M + G +YDT+ +K +V+T+ +G A M LLLA G KGKR+ +P ++IMI QP
Sbjct: 73 MVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AK + +D L K+LA HTG E + + R M + AKE+G+ID
Sbjct: 133 RG--QASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVRDTDRDNFMMADEAKEYGLID 190
Query: 292 KVL 294
V+
Sbjct: 191 HVI 193
>gi|124023703|ref|YP_001018010.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123963989|gb|ABM78745.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 200
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 10/174 (5%)
Query: 121 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIY 180
RI+++G + V +VA+++YL D PIYLYINS G G + G AIY
Sbjct: 31 RILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPG---------GSVTAGLAIY 81
Query: 181 DTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDV 240
DT+ +K +V T+ VG A M LL AGTKGKR +PH++IMI QP L + ASD+
Sbjct: 82 DTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQP-LGGTNQRQASDI 140
Query: 241 LIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
I A+E + +D L +A+ TG + E + K R Y + + AK++G+ID+V+
Sbjct: 141 EIEAREILRIKDMLNHSMAELTGQTFEKIEKDTDRDYFLSAAEAKDYGLIDRVI 194
>gi|336422809|ref|ZP_08602950.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 5_1_57FAA]
gi|336007150|gb|EGN37176.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 193
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++VA+L++L+ DP+ I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDIHLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC++ T+ +G A M LLA GTKGKR +P+A+IMI QP +
Sbjct: 70 SVTAGLAIYDTMQYIKCDIETICIGMAASMGSFLLAGGTKGKRLALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + R L ++LA++TG + + R M + AK +G+ID
Sbjct: 130 QG--QATEIQIAAEHILKTRQKLNQILAENTGQPLDVIRIDTERDNFMSAEEAKAYGLID 187
Query: 292 KVL 294
+V+
Sbjct: 188 EVI 190
>gi|74317695|ref|YP_315435.1| ATP-dependent Clp protease proteolytic subunit [Thiobacillus
denitrificans ATCC 25259]
gi|90183186|sp|Q3SI98.1|CLPP_THIDA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74057190|gb|AAZ97630.1| peptidase S14, ClpP [Thiobacillus denitrificans ATCC 25259]
Length = 212
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL R++++ P+ A L+VA++++L+ +P IYLYINS G G
Sbjct: 33 DIYSRLLKERVIFLVGPVNDATANLIVAQMLFLESENPDKDIYLYINSPG---------G 83
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYDT+ +K +V T+ +G A M LL AG KGKR+ +P++++MI QP
Sbjct: 84 SVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGF 143
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I AKE + + L +LAKHTG S E + + R M + + ++G++D
Sbjct: 144 QG--QASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAEDSVKYGLVD 201
Query: 292 KVL 294
KVL
Sbjct: 202 KVL 204
>gi|22298615|ref|NP_681862.1| ATP-dependent Clp protease proteolytic subunit [Thermosynechococcus
elongatus BP-1]
gi|34222549|sp|Q8DJZ9.1|CLPP2_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|22294795|dbj|BAC08624.1| ATP-dependent Clp protease proteolytic subunit 2
[Thermosynechococcus elongatus BP-1]
Length = 198
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 11/189 (5%)
Query: 106 PDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRD 165
P T D+ + L RI+++G + + +VA ++YL DP I LYINS G
Sbjct: 16 PYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPG---- 71
Query: 166 DGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQ 225
G + G AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI
Sbjct: 72 -----GSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIH 126
Query: 226 QPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAK 285
QP + G A+D+ I A+E + R L +L A HTG E + + + R + M + AK
Sbjct: 127 QPSGGTRG--QATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAK 184
Query: 286 EFGVIDKVL 294
+G+ID+V+
Sbjct: 185 NYGLIDRVI 193
>gi|414079205|ref|YP_007000629.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972484|gb|AFW96572.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 197
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++G + + ++A ++YL DP IYLYINS G GM + G
Sbjct: 27 LYRERIIFLGRDVDDEIANQIIAVMLYLDSDDPGKDIYLYINSPG---------GMVTSG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP + G
Sbjct: 78 LAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
ASD+ I A+E + R L ++ A +T + K + R + M ++ AKE+G+ID+V+
Sbjct: 136 ASDIEIEAREILRIRSQLNQIYADNTTQPLSKIEKDMDRDFFMSAQEAKEYGLIDRVI 193
>gi|402829243|ref|ZP_10878119.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Slackia sp. CM382]
gi|402284224|gb|EJU32727.1| putative ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Slackia sp. CM382]
Length = 208
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RIV++G + V +VVA+L++L+ DP+ I LYINS G G
Sbjct: 25 DIYSRLLNDRIVFLGDAIDDGVANIVVAQLLHLESSDPEKDISLYINSPG---------G 75
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYD + ++C+V TV +G A MA +L AAG GKRF+ P+++IMI QP S
Sbjct: 76 SVSAGLAIYDAMQFIRCDVSTVCLGMAASMASVLTAAGAPGKRFVTPNSQIMIHQPMGGS 135
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+D I A E RD L LLA HTG + E + R + + + AK +G++D
Sbjct: 136 GERTQQTDFDILANEMRKTRDRLEGLLATHTGKTVEQIHADSERDHWLTAEEAKAYGLVD 195
Query: 292 KVL 294
++
Sbjct: 196 DII 198
>gi|354566299|ref|ZP_08985472.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353546807|gb|EHC16255.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + V L+VA+L++L DP+ IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQAIDDNVANLIVAQLLFLDAEDPEKDIYVYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L + LA+HTG E + + R + M A+++G+ID
Sbjct: 128 RG--QATDIEIQAREILYHKRRLNEYLAEHTGQPLEKIAEDTERDFFMSPEEARDYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|383323811|ref|YP_005384665.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326980|ref|YP_005387834.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492864|ref|YP_005410541.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384438132|ref|YP_005652857.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339275165|dbj|BAK51652.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359273131|dbj|BAL30650.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359276301|dbj|BAL33819.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359279471|dbj|BAL36988.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G P+ V + +VA+L++L DP+ I LYINS G G
Sbjct: 14 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPG---------G 64
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
G AIYDT+ Q++ +V T+ G A M LL+ G KGKR +P ++IMI QP +
Sbjct: 65 SVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGA 124
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A ++ I+A+E + +D L +L +HTG E + + R + M + AKE+G+ID
Sbjct: 125 QG--QAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLID 182
Query: 292 KVLWR 296
+V+ R
Sbjct: 183 QVISR 187
>gi|387782216|ref|YP_005792929.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
51]
gi|387907882|ref|YP_006338216.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
XZ274]
gi|261837975|gb|ACX97741.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
51]
gi|387572817|gb|AFJ81525.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
XZ274]
Length = 196
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV + + +V +VA+L++L+ DP+ I LYINS G G
Sbjct: 20 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG---------G 70
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G +IYDT+ ++ +V T+ +G A M LL+ G KGKRF +PH++IMI QP +
Sbjct: 71 VITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGA 130
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ I + E + + + +LA+++G S E + K R ++M ++ AKE+G+ID
Sbjct: 131 QG--QASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLID 188
Query: 292 KVLWR 296
KVL +
Sbjct: 189 KVLEK 193
>gi|257063882|ref|YP_003143554.1| protease subunit of ATP-dependent protease [Slackia
heliotrinireducens DSM 20476]
gi|256791535|gb|ACV22205.1| protease subunit of ATP-dependent protease [Slackia
heliotrinireducens DSM 20476]
Length = 206
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 9/183 (4%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL+ RI+++G + V LVVA+L++L+ DP+ I LYINS G G
Sbjct: 24 DIYSRLLNDRIIFLGDAIDDNVANLVVAQLLHLESSDPEKDISLYINSPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
S G AIYD + ++C+V TV +G A MA +L AAGT GKRF+ P+++IMI QP +
Sbjct: 75 SVSAGMAIYDAMQFIRCDVSTVCIGMAASMASVLTAAGTPGKRFITPNSQIMIHQPMGGA 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
+D I A E R+ L +LA HTG + E + R + + + AK +G++D
Sbjct: 135 ESRTQQTDFEIAATEMRKTRERLEGILAAHTGQTIETIHADSERDHWLTAEEAKAYGLVD 194
Query: 292 KVL 294
+++
Sbjct: 195 EII 197
>gi|86605372|ref|YP_474135.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
JA-3-3Ab]
gi|115311343|sp|Q2JWJ1.1|CLPP1_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86553914|gb|ABC98872.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 203
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 14/191 (7%)
Query: 113 LPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGM 172
L L RI++IG P+ + +V ++YL DP+ I +YINS G G
Sbjct: 23 LDDRLYQERILFIGEPIDDNLANTIVGVMLYLNSQDPQKDIVMYINSPG---------GS 73
Query: 173 ESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSS 232
+ G AIYDT+ +K ++ TV VG A M LLAAGTKGKRF +PH++IM+ QP L
Sbjct: 74 VTAGMAIYDTMNHVKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSL--- 130
Query: 233 GLL--PASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G++ ASD+ IRA+E + + + +LLA+ TG E + + + R +++ + A+ +G++
Sbjct: 131 GMIQGQASDIEIRARETLRVKRRMNELLAQMTGQPLEKIERDVERDFYLSATEAQAYGIV 190
Query: 291 DKVLWRGQETI 301
D+V+ E +
Sbjct: 191 DRVIQERSEAM 201
>gi|29840675|ref|NP_829781.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
caviae GPIC]
gi|33300938|sp|Q821M0.1|CLPP2_CHLCV RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|29835025|gb|AAP05659.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydophila
caviae GPIC]
Length = 203
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 13/190 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV IG + + V+A+L++L DPK I ++INS G G
Sbjct: 19 DIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPKKDIKVFINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ + C+V+T +G A M LLL+AGTKGKR+ +PH+++MI Q PS
Sbjct: 70 YITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQ---PS 126
Query: 232 SGLLPAS-DVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVI 290
G++ S D+ ++A E + + L +L++ TG S E + + R + M + A +G+I
Sbjct: 127 GGIIGTSADIQLQAAEILTLKKHLANILSECTGQSVEKIIEDSERDFFMGAEEAISYGLI 186
Query: 291 DKVLWRGQET 300
DKV+ ++T
Sbjct: 187 DKVVSSAKDT 196
>gi|266624421|ref|ZP_06117356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
hathewayi DSM 13479]
gi|288863728|gb|EFC96026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
hathewayi DSM 13479]
Length = 195
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 11/184 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + +VVA+L++L+ DP I LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVTDVSASIVVAQLLFLEAEDPNKDINLYINSPG---------G 69
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +KC+V TV +G A M LL+ G KGKRF +P+A+IMI QP +
Sbjct: 70 SVTAGMAIYDTMNYIKCDVSTVCMGMAASMGAFLLSGGAKGKRFALPNAEIMIHQPSGGA 129
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+++ I A+ + + L ++LA +TG E + + R +M++ AK +G+ID
Sbjct: 130 QG--QATEIKIVAENILKIKKRLNEILAANTGQPYEVIERDTERDNYMNAEEAKAYGLID 187
Query: 292 KVLW 295
++++
Sbjct: 188 EIIY 191
>gi|428213615|ref|YP_007086759.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428001996|gb|AFY82839.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV++G + + L+VA+L++L+ D + IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVDADLANLIVAQLLFLEAEDAEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ +G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMNHIRPDVSTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+AKE + ++ L LL++HTG E + + R + M ++ + ++G+ID
Sbjct: 128 QG--QATDIEIQAKEILYHKKRLNTLLSEHTGQPLERIEQDTERDFFMSAKESVDYGLID 185
Query: 292 KVLWR 296
V+ R
Sbjct: 186 LVIDR 190
>gi|427718283|ref|YP_007066277.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427350719|gb|AFY33443.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + ++ L+VA+L++L D + IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDADDSEKDIYLYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L LA+HTG E + + R + M A+E+G+ID
Sbjct: 128 QG--QATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAREYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|86608099|ref|YP_476861.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|115311344|sp|Q2JHM1.1|CLPP1_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86556641|gb|ABD01598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 203
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 12/190 (6%)
Query: 113 LPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGM 172
L L RI++IG P+ ++ +V ++YL DP+ I +YINS G G
Sbjct: 23 LDDRLYQERILFIGEPIDDSLANTIVGVMLYLNSQDPQKDIVMYINSPG---------GS 73
Query: 173 ESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS- 231
+ G AIYDT+ +K ++ TV VG A M LLAAGTKGKRF +PH++IM+ QP L +
Sbjct: 74 VTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSLGTI 133
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD+ IRA+E + + + ++LA+ TG E + + + R +++ + A+ +G++D
Sbjct: 134 QG--QASDIEIRARETLRVKRRMNEILAQTTGQPLEKIERDVERDFYLSATEAQAYGIVD 191
Query: 292 KVLWRGQETI 301
+V+ E +
Sbjct: 192 RVIQERSEAM 201
>gi|251772219|gb|EES52789.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Leptospirillum ferrodiazotrophum]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+ +G P+ V LV+A++++L+ D I LYINS G G
Sbjct: 18 DIYSRLLRDRIIILGTPIDDTVANLVIAQMLFLESEDSSKDINLYINSPG---------G 68
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ +K +V T+ +G A M LL+AG KGKR+ +P+A+IMI QP
Sbjct: 69 IVTAGLAIYDTIKFIKPDVSTICIGQAASMGAFLLSAGAKGKRYALPNARIMIHQPMGGF 128
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + + L +++++H G E V + R Y M ++ AK++G+ID
Sbjct: 129 QG--QATDIEIHAREILKLKADLNRMMSEHCGQPVEKVAQDTDRDYFMSAKEAKDYGLID 186
Query: 292 KVL 294
V+
Sbjct: 187 SVI 189
>gi|228470612|ref|ZP_04055469.1| Clp protease [Porphyromonas uenonis 60-3]
gi|228307739|gb|EEK16715.1| Clp protease [Porphyromonas uenonis 60-3]
Length = 221
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 11/208 (5%)
Query: 103 EHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGT 162
E + + D+ S L+ RI+++G + ++ A+L+YL DP I +YINS G
Sbjct: 24 ERQLNVAQMDVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISIYINSPG- 82
Query: 163 TRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKI 222
G GF IYDT+ + C+V T+ G A MA +LL AG +GKR+ +PH+++
Sbjct: 83 --------GSVYAGFGIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRV 134
Query: 223 MIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSR 282
MI QP G ASD+ I AKE + + L K++A H+G S E + + R M +
Sbjct: 135 MIHQPMGGMQG--QASDIEIAAKEILKVKAELYKIIADHSGRSVEEIERDSDRDKWMTAS 192
Query: 283 RAKEFGVIDKVLWRGQETIMAEVAPPEE 310
A E+G+IDKVL ++T + A +E
Sbjct: 193 EALEYGMIDKVLTSTKQTAKEKKADGKE 220
>gi|427730534|ref|YP_007076771.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
gi|427366453|gb|AFY49174.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
Length = 197
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 117 LLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEG 176
L RI+++G + + ++A ++YL DP IYLYINS G GM + G
Sbjct: 27 LYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG---------GMVTSG 77
Query: 177 FAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLP 236
AIYDT+ +K +V T+ VG A M LLAAGTKGKR +PH++IMI QP + G
Sbjct: 78 LAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRG--Q 135
Query: 237 ASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVL 294
A+D+ I A+E + R L ++ A +T + K + R + M ++ AKE+G+ID+V+
Sbjct: 136 ATDIEIEAREILRIRSQLNQIYANNTSQPLAKIEKDMDRDFFMSAQEAKEYGLIDRVI 193
>gi|427707070|ref|YP_007049447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359575|gb|AFY42297.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 201
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 108/185 (58%), Gaps = 11/185 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RI+++G + + L+VA++++L DP+ IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQIDSNLANLIVAQMLFLDAEDPEKDIYMYINSPG---------G 67
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G I+DT+ ++ +V T+ G A M LL+AG KGKR +PH++IMI QP +
Sbjct: 68 SVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGA 127
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + ++ L LA+HTG E + + R + M A+E+G+ID
Sbjct: 128 QG--QATDIEIQAREILYHKKRLNDFLAEHTGQPIERIAEDTERDFFMSPDEAREYGLID 185
Query: 292 KVLWR 296
+V+ R
Sbjct: 186 QVIDR 190
>gi|298491711|ref|YP_003721888.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233629|gb|ADI64765.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 197
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
DL L RI+++ + + +VA +YL D PIYLYINS G G
Sbjct: 22 DLEDRLFRERIIFLTEEVDDGIANAIVAYFLYLDSDDQTKPIYLYINSPG---------G 72
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K EV T+ VG A M LLA GT+GKR +PH++IMI QP +
Sbjct: 73 SVTAGMAIYDTMQYIKSEVVTICVGLAASMGSFLLATGTQGKRLALPHSRIMIHQPSGGT 132
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I A+E + R L ++ A +TG + + K + R + M ++ AKE+G+ID
Sbjct: 133 RG--QATDIQIEAQEILRIRSQLNQIYADNTGQALAKIEKDMDRDFFMSAQEAKEYGLID 190
Query: 292 KVL 294
+V+
Sbjct: 191 RVI 193
>gi|307718289|ref|YP_003873821.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
thermophila DSM 6192]
gi|306532014|gb|ADN01548.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
thermophila DSM 6192]
Length = 206
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 11/187 (5%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+I + +LVVA+L++L+ DP+ I +YIN+ G G
Sbjct: 24 DIYSRLLKDRIVFIDGEINDLTADLVVAQLLFLESQDPEKDISVYINTPG---------G 74
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ G AIYDT+ +K +V T+ +G A M LLL AGT GKR +P ++I+I QP
Sbjct: 75 SVTAGLAIYDTMQYVKPDVQTICLGQAASMGALLLTAGTPGKRLALPSSRILIHQPWGGV 134
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G A+D+ I+A+E + + L+ A+HTG EE V + + R Y+M AK +G+ID
Sbjct: 135 QG--QATDISIQAREMVRIKKLLIHYFARHTGRPEEEVAQDLERDYYMTPEEAKAYGLID 192
Query: 292 KVLWRGQ 298
+L R +
Sbjct: 193 DILIRSK 199
>gi|406942059|gb|EKD74394.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 210
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 105/182 (57%), Gaps = 11/182 (6%)
Query: 112 DLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVG 171
D+ S LL RIV+I P+ V+ LVVA+L++L+ +P I LYINS G G
Sbjct: 27 DIFSRLLKDRIVFIVGPIDDYVSNLVVAQLLFLESENPDKDISLYINSPG---------G 77
Query: 172 MESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPS 231
+ + G AIYDT+ + +V T+ +G A M LLLA G GKR +P+A++MI QP
Sbjct: 78 VVTAGLAIYDTMQFITPDVSTMCIGQAASMGALLLAGGAPGKRLCLPNARVMIHQPLGGV 137
Query: 232 SGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVID 291
G ASD++I A+E + R L K+LA HTG EE + K R M RA E+ +ID
Sbjct: 138 QG--QASDIMIHAEETLKIRARLNKILAYHTGQPEEVIAKDTDRDNFMSPERALEYRLID 195
Query: 292 KV 293
K+
Sbjct: 196 KI 197
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.131 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,995,767,498
Number of Sequences: 23463169
Number of extensions: 211844864
Number of successful extensions: 563057
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5491
Number of HSP's successfully gapped in prelim test: 310
Number of HSP's that attempted gapping in prelim test: 547386
Number of HSP's gapped (non-prelim): 5891
length of query: 313
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 171
effective length of database: 9,027,425,369
effective search space: 1543689738099
effective search space used: 1543689738099
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)