Citrus Sinensis ID: 035798

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310---
MSTSFLQAPMAALVPSTSVHSLRSKSTRSLKTFCSAKIPNPMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK
cccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHcccccccccccccccccccEEEEcccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccccEEECcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccHHHHHHccccHHHHccccccccccccccccccc
********************************************************************************DIYDSPTLMASPAQVE****Y**HRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQET*M***********
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSTSFLQAPMAALVPSTSVHSLRSKSTRSLKTFCSAKIPNPMPAHINPNDPFLSKLAAAAAASPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRPDTPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic confidentQ8L770

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3P2L, chain A
Confidence level:very confident
Coverage over the Query: 90-162,173-299
View the alignment between query and template
View the model in PyMOL