Query 035812
Match_columns 520
No_of_seqs 325 out of 2200
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 10:53:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035812.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035812hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 4.4E-91 1.5E-95 742.7 50.7 502 8-517 3-514 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 8.2E-88 2.8E-92 716.1 46.6 488 11-516 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 7.7E-83 2.6E-87 683.9 44.7 491 7-520 6-500 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 3.3E-76 1.1E-80 625.8 38.7 456 11-516 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 1.3E-74 4.3E-79 616.3 42.6 457 25-515 6-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 2.3E-70 7.9E-75 587.9 43.6 461 13-515 24-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 1.4E-69 4.9E-74 581.9 45.3 466 8-516 17-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 5.7E-69 2E-73 577.5 45.0 455 28-516 33-528 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 1.7E-69 5.7E-74 579.5 40.0 459 6-516 3-479 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.5E-66 5E-71 552.0 35.3 436 28-515 13-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2.1E-40 7.2E-45 357.5 33.0 217 8-242 30-257 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 1.9E-33 6.3E-38 301.9 35.1 188 50-242 52-250 (524)
13 4bby_A Alkyldihydroxyacetoneph 100.0 3.1E-34 1.1E-38 315.8 21.6 191 52-243 198-397 (658)
14 3pm9_A Putative oxidoreductase 100.0 3.9E-33 1.3E-37 295.3 21.0 205 50-260 42-253 (476)
15 2vfr_A Xylitol oxidase, aldito 100.0 9.4E-31 3.2E-35 274.5 29.6 174 51-235 12-188 (422)
16 2uuu_A Alkyldihydroxyacetoneph 100.0 1E-31 3.5E-36 290.7 21.7 185 57-242 135-326 (584)
17 4feh_A Oxidoreductase DPRE1; a 100.0 1.9E-31 6.5E-36 282.6 21.6 200 50-260 34-238 (481)
18 1wvf_A 4-cresol dehydrogenase 100.0 4.1E-31 1.4E-35 284.1 23.3 198 57-262 54-268 (520)
19 2i0k_A Oxidoreductase; MIX alp 100.0 3.7E-30 1.3E-34 278.2 16.9 197 28-235 9-226 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 1.8E-28 6.2E-33 265.3 25.5 201 56-262 67-300 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 8.1E-29 2.8E-33 262.4 19.1 189 35-234 11-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 5.8E-29 2E-33 267.4 18.0 235 2-259 2-297 (571)
23 3i99_A UDP-N-acetylenolpyruvoy 99.9 1.6E-25 5.4E-30 226.8 13.2 165 56-232 27-199 (357)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 2.1E-25 7.3E-30 223.7 13.3 164 56-232 51-217 (322)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 6.6E-25 2.3E-29 221.5 10.1 160 56-230 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 6.5E-24 2.2E-28 214.4 16.9 164 57-232 12-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 7.2E-23 2.4E-27 199.8 9.8 152 58-231 21-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 1.2E-19 4.3E-24 171.9 11.7 115 117-239 1-123 (219)
29 1ffv_C CUTM, flavoprotein of c 98.1 9.3E-06 3.2E-10 79.9 9.0 155 59-230 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.4 0.00029 9.8E-09 69.2 8.4 154 59-229 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 96.8 0.0011 3.7E-08 69.3 6.1 150 63-229 180-345 (462)
32 3nvz_B Xanthine dehydrogenase/ 96.1 0.0095 3.2E-07 58.8 7.0 156 59-228 9-189 (305)
33 1t3q_C Quinoline 2-oxidoreduct 93.1 0.11 3.9E-06 50.5 6.0 151 59-227 4-173 (288)
34 3hrd_C Nicotinate dehydrogenas 91.7 0.19 6.6E-06 49.1 5.6 75 60-139 3-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 86.0 1.1 3.9E-05 44.1 6.4 76 59-140 5-84 (324)
36 1wvf_A 4-cresol dehydrogenase 80.3 2.2 7.6E-05 44.9 6.4 31 482-512 481-512 (520)
37 4bby_A Alkyldihydroxyacetoneph 70.3 1.6 5.5E-05 47.5 2.0 28 482-509 626-654 (658)
38 3unc_A Xanthine dehydrogenase/ 66.4 4.4 0.00015 47.6 4.7 78 59-142 232-313 (1332)
39 1f0x_A DLDH, D-lactate dehydro 62.8 4.7 0.00016 42.9 3.7 32 488-520 536-567 (571)
40 2i0k_A Oxidoreductase; MIX alp 50.8 7 0.00024 41.5 2.6 22 489-510 533-554 (561)
41 1e8g_A Vanillyl-alcohol oxidas 49.4 17 0.00059 38.4 5.4 23 489-511 523-545 (560)
42 1xty_A PTH, peptidyl-tRNA hydr 47.9 18 0.00061 29.9 4.1 42 51-94 48-90 (120)
43 4feh_A Oxidoreductase DPRE1; a 45.5 8 0.00027 40.2 2.0 28 482-511 447-474 (481)
44 3pm9_A Putative oxidoreductase 39.9 10 0.00034 39.4 1.7 27 482-508 444-471 (476)
45 3js8_A Cholesterol oxidase; ch 36.8 16 0.00053 38.6 2.5 23 488-510 511-533 (540)
46 1wn2_A Peptidyl-tRNA hydrolase 36.1 55 0.0019 26.9 5.3 38 57-94 53-91 (121)
47 1rzw_A Protein AF2095(GR4); be 35.6 42 0.0014 27.8 4.5 37 58-94 47-84 (123)
48 2zv3_A PTH, peptidyl-tRNA hydr 33.3 57 0.0019 26.5 4.9 38 57-94 47-85 (115)
49 3zyv_A AOH1; oxidoreductase, m 32.4 23 0.0008 41.6 3.3 77 62-143 242-321 (1335)
50 1rlk_A Hypothetical protein TA 32.4 62 0.0021 26.4 5.0 38 57-94 49-87 (117)
51 1q7s_A BIT1, protein CGI-147; 28.7 92 0.0032 25.3 5.5 36 58-93 50-86 (117)
52 2uuu_A Alkyldihydroxyacetoneph 26.8 24 0.00083 37.5 2.0 28 482-509 552-580 (584)
53 3p04_A Uncharacterized BCR; SE 25.3 52 0.0018 25.4 3.1 35 60-116 6-40 (87)
54 2lnd_A De novo designed protei 24.3 68 0.0023 24.1 3.4 33 62-94 30-62 (112)
55 2g2c_A Putative molybdenum cof 23.6 1.3E+02 0.0046 25.8 6.0 40 61-100 47-86 (167)
56 2gvs_A Chemosensory protein CS 21.2 37 0.0013 27.5 1.6 14 495-508 84-97 (109)
57 1yht_A DSPB; beta barrel, hydr 21.0 62 0.0021 32.1 3.6 28 67-94 92-121 (367)
58 1mkz_A Molybdenum cofactor bio 20.9 1.7E+02 0.0058 25.3 6.1 39 61-99 46-85 (172)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=4.4e-91 Score=742.74 Aligned_cols=502 Identities=48% Similarity=0.854 Sum_probs=425.5
Q ss_pred chhHHHHhhccCCCCCCCCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEE
Q 035812 8 NLELFLKCLLHDHVEPSNPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELR 87 (520)
Q Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~ 87 (520)
+.++|.+||+.. ++++.+|++.|++|+|+.|++++.+|++|.||+.....+|.+||+|++++||+++|++|+++++||+
T Consensus 3 ~~~~f~~c~~~~-~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~ 81 (518)
T 3vte_A 3 PRENFLKCFSKH-IPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIR 81 (518)
T ss_dssp HHHHHHHHHHHH-CCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred hhHHHHHHHHhc-CCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEE
Confidence 467999999998 7788899999999999999999888999999999889999999999999999999999999999999
Q ss_pred EEeCccCCCCCcccCCCCeEEEEeeccccEEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCCccchhhhhcC
Q 035812 88 IRSGGHDYEGLSYTSTVPFVVLDMFNLRKIDINIADETAWVQAGATIGELYYQISNVSKLHAFPAGVCPTIGAGGHITGG 167 (520)
Q Consensus 88 ~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~gg 167 (520)
|||||||+.|.+.....++++|||++||+|++|+++++++||||+++++|+++|.++|+++.+++|.|++|||||+++||
T Consensus 82 vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gG 161 (518)
T 3vte_A 82 TRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGG 161 (518)
T ss_dssp EESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTC
T ss_pred EECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCC
Confidence 99999999987743222499999999999999999999999999999999999999887889999999999999999999
Q ss_pred CCCCCccccCccccceeEEEEEeecccEEeeccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeecccccc
Q 035812 168 GYGNLMRKYGLSSDNVVDAQLVDVEGRILNRESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTTDQAT 247 (520)
Q Consensus 168 g~g~~~~~~G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~ 247 (520)
|+|+++++||+++|+|++++||++||++++.+.+++|||||+||||+|+|||||+++||++|.|+.+..|.+.+.++
T Consensus 162 g~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~--- 238 (518)
T 3vte_A 162 GYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNME--- 238 (518)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCC---
T ss_pred CCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCC---
Confidence 99999999999999999999999999999754468999999999855899999999999999998888888877652
Q ss_pred cchHHHHHHHHHHHccCCCCCceEEEEeeeecCC---CCCcceEEEEEEEEEeCCcccHHHHHhhhCcccCCCcCcceec
Q 035812 248 SQGATDVIYKWQQVAPKLPGELFIRAMPKVVNGS---RPLEKTVMVSFIGMFLGQISSLIPLMNQQFPELGLRAEDCHEM 324 (520)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~ 324 (520)
.+++.+++.+|+++++.+|+++++.+.+...++. ..+...+.+.+.++|+|+.+++.+.|.+.|++++....++.++
T Consensus 239 ~~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~ 318 (518)
T 3vte_A 239 IHGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEF 318 (518)
T ss_dssp HHHHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeec
Confidence 2457889999999999999999998887653211 1111234677889999999999988888788888776778899
Q ss_pred ChHHHHHhhccccCC-Cc---hhhccCCCCCCCCcceeccccccCCCCHHHHHHHHHHHHhc--CceEEEEeeCCCcCCC
Q 035812 325 SWVESTLFWDQYRIG-TS---IKVLLNRSTDVKFSSKNKSDYVKNVIPKKALEEIWTKMINF--GNMWMQWNPYGGRMSE 398 (520)
Q Consensus 325 ~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~--~~~~i~~~~~GGav~~ 398 (520)
+|++.+.++..++.+ .+ ++.+.++......+||.||.|+.+++++++|+.+++.+.+. +.+.+.++++||+|++
T Consensus 319 ~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~ 398 (518)
T 3vte_A 319 SWIDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEE 398 (518)
T ss_dssp CHHHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGT
T ss_pred chhhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccC
Confidence 999988887755433 22 34444543334457888999998889999999999988763 3578899999999999
Q ss_pred CCCCCCCCcccCCCeEEEEEEeeccccCccchhHHHHHHHHHHHhcccCccCCCCCcccCCCCCccC-CCCCCCCCcccc
Q 035812 399 ISESETAFPHRAGNLFKIQYCALWEEEGINSTNLYTSKIRDFYASMAPYVSNSPREAFHNYRDLDIG-NSYPSNKTSLLR 477 (520)
Q Consensus 399 v~~~~tAf~~Rd~~~~~i~~~~~W~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~g~Y~Ny~d~~l~-~q~~~~~~~~~~ 477 (520)
+++++|||+||++..|.+++.+.|.++ +.++++++|++++++.|.||.+..++++|+||.|.+++ . ++.++++ |+
T Consensus 399 v~~~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~-~~~~~~~-~~ 474 (518)
T 3vte_A 399 ISESAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKT-NHASPNN-YT 474 (518)
T ss_dssp SCTTSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCC-CTTSCCC-HH
T ss_pred CCCCCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCcccccc-ccccccc-hh
Confidence 999999999999558999999999765 45678999999999999999755567899999998876 2 1112222 33
Q ss_pred ccchhhhccccccHHHHHHHHhhcCCCCCCCCCCCCCCCC
Q 035812 478 DADVYGAKYFKGNYKRLVEVKTKVDPFNFFKNEQSIPPGL 517 (520)
Q Consensus 478 ~~~~~~~~y~g~n~~RL~~iK~kYDP~nvF~~~qsI~p~~ 517 (520)
.++.|+++|||+||+||++||+||||+|||+++|||+|..
T Consensus 475 ~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~ 514 (518)
T 3vte_A 475 QARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLP 514 (518)
T ss_dssp HHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred hhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCC
Confidence 4556999999999999999999999999999999999874
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=8.2e-88 Score=716.13 Aligned_cols=488 Identities=40% Similarity=0.721 Sum_probs=416.2
Q ss_pred HHHHhhccCCCCCCCCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEe
Q 035812 11 LFLKCLLHDHVEPSNPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRS 90 (520)
Q Consensus 11 ~~~~~l~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g 90 (520)
+|.+||++. +.++ ++.|++|+|++|++++.++++|.||+......|.+|++|++++||+++|++|+++++|++|||
T Consensus 1 ~~~~cl~~~-~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrG 76 (495)
T 3fw9_A 1 DLLSCLTFN-GVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRS 76 (495)
T ss_dssp CHHHHHHHT-TCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEES
T ss_pred ChhHHHhhc-CCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 489999988 4322 688999999999999878899999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcccCCCCeEEEEeeccccEEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCCccchhhhhcCCCC
Q 035812 91 GGHDYEGLSYTSTVPFVVLDMFNLRKIDINIADETAWVQAGATIGELYYQISNVSKLHAFPAGVCPTIGAGGHITGGGYG 170 (520)
Q Consensus 91 gGh~~~g~~~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g 170 (520)
||||+.|.+...+.++++|||++||+|++|+++.+++||||+++.+|+++|.+++.++.+++|.|+++||||+++|||+|
T Consensus 77 gGh~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G 156 (495)
T 3fw9_A 77 GGHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFG 156 (495)
T ss_dssp SCCCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCC
T ss_pred CCcCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCc
Confidence 99999988775444589999999999999999999999999999999999999976788999999999999999999999
Q ss_pred CCccccCccccceeEEEEEeecccEEeeccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeecccccccch
Q 035812 171 NLMRKYGLSSDNVVDAQLVDVEGRILNRESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTTDQATSQG 250 (520)
Q Consensus 171 ~~~~~~G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 250 (520)
+++++||+++|+|++++||++||++++++.+++||||++|||++|+|||||+++|||+|.|+.+..+.+.+.++ .++
T Consensus 157 ~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~---~~~ 233 (495)
T 3fw9_A 157 MMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVA---IDE 233 (495)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEEC---HHH
T ss_pred ccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCc---HHH
Confidence 99999999999999999999999999855568999999999655899999999999999998887777777551 245
Q ss_pred HHHHHHHHHHHccCCCCCceEEEEeeeecCCCCCcceEEEEEEEEEeCCcccHHHHHhhhCcccCCCcCcceecChHHHH
Q 035812 251 ATDVIYKWQQVAPKLPGELFIRAMPKVVNGSRPLEKTVMVSFIGMFLGQISSLIPLMNQQFPELGLRAEDCHEMSWVEST 330 (520)
Q Consensus 251 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 330 (520)
+.+++.+|++++..+|+++++.+.... . + ....+.+.++|+|+.+++.+.|.+.|+++++...++.+++|.+.+
T Consensus 234 a~~~l~~~~~~~~~~~~~l~~~~~~~~--~---~-~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~ 307 (495)
T 3fw9_A 234 ATSLLHKWQFVAEELEEDFTLSVLGGA--D---E-KQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESF 307 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTEEEEEEEEE--E---T-TEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHH
T ss_pred HHHHHHHHHHHHhcCChhHeEEEEEcC--C---C-CceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHH
Confidence 788999999999999999988776431 1 1 224577889999999999888888788888777788999999988
Q ss_pred HhhccccCCCchhhccCCCCC-CCCcceeccccccCCCCHHHHHHHHHHHHhcCceEEEEeeCCCcCCCCCCCCCCCccc
Q 035812 331 LFWDQYRIGTSIKVLLNRSTD-VKFSSKNKSDYVKNVIPKKALEEIWTKMINFGNMWMQWNPYGGRMSEISESETAFPHR 409 (520)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~GGav~~v~~~~tAf~~R 409 (520)
.++..++. ++.+.++... .+.+||.||.|+.+++++++++.+++.+.+.+...++++++||+++++++++|||+||
T Consensus 308 ~~~~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR 384 (495)
T 3fw9_A 308 AYLAGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHR 384 (495)
T ss_dssp HHHTTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCC
T ss_pred HHHhcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCcccc
Confidence 77654331 2333343222 3467889999999899999999999988876777899999999999999999999999
Q ss_pred CCCeEEEEEEeeccccCccchhHHHHHHHHHHHhcccCccCCCCCcccCCCCCccCCCCCC-----CCCccccccchhhh
Q 035812 410 AGNLFKIQYCALWEEEGINSTNLYTSKIRDFYASMAPYVSNSPREAFHNYRDLDIGNSYPS-----NKTSLLRDADVYGA 484 (520)
Q Consensus 410 d~~~~~i~~~~~W~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~g~Y~Ny~d~~l~~q~~~-----~~~~~~~~~~~~~~ 484 (520)
++..|.+++.+.|.++.++.++++++|++++++.|.||....++++|+||.|.+++. ++. ++++ |+.++.|++
T Consensus 385 ~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~-~~~~~~~~~~~~-~~~~~~w~~ 462 (495)
T 3fw9_A 385 SGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGG-IDWGNKTVVNNA-IEISRSWGE 462 (495)
T ss_dssp TTCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCC-CCTTCHHHHHTH-HHHHHHHHH
T ss_pred CccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccc-cccccccccccc-cchhhhhHH
Confidence 855899999999976433456788999999999999997545678999999988752 110 0011 223456999
Q ss_pred ccccccHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 035812 485 KYFKGNYKRLVEVKTKVDPFNFFKNEQSIPPG 516 (520)
Q Consensus 485 ~y~g~n~~RL~~iK~kYDP~nvF~~~qsI~p~ 516 (520)
+|||+||+||++||+||||+|||+++|||+|.
T Consensus 463 ~Yyg~n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 463 SYFLSNYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp HHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHhHhHHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 99999999999999999999999999999986
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=7.7e-83 Score=683.88 Aligned_cols=491 Identities=45% Similarity=0.849 Sum_probs=404.4
Q ss_pred cchhHHHHhhccCCCCCCCCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeE
Q 035812 7 SNLELFLKCLLHDHVEPSNPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLEL 86 (520)
Q Consensus 7 ~~~~~~~~~l~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~ 86 (520)
+..++|.+||.+.+. .+.|++|+|+.|+++..++.+|.||+.....+|.+||+|++++||+++|++|+++++||
T Consensus 6 ~~~~~f~~~L~~~~~------~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~ 79 (500)
T 3tsh_A 6 AAKEDFLGCLVKEIP------PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRI 79 (500)
T ss_dssp ---CHHHHHHHHHSC------GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHHHhhCC------CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcE
Confidence 456899999999954 46799999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCccCCCCCcccC--CCCeEEEEeeccccEEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCCccchhhh
Q 035812 87 RIRSGGHDYEGLSYTS--TVPFVVLDMFNLRKIDINIADETAWVQAGATIGELYYQISNVSKLHAFPAGVCPTIGAGGHI 164 (520)
Q Consensus 87 ~~~ggGh~~~g~~~~~--~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~ 164 (520)
+||||||++.|.+.+. .+++++|||++||+|++|+++++++||||++|+||+++|.++|+.+++++|.|++|||||++
T Consensus 80 ~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~ 159 (500)
T 3tsh_A 80 RVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNF 159 (500)
T ss_dssp EEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHH
T ss_pred EEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCcc
Confidence 9999999999876532 13589999999999999999999999999999999999999998888999999999999999
Q ss_pred hcCCCCCCccccCccccceeEEEEEeecccEEeeccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeeccc
Q 035812 165 TGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILNRESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTTD 244 (520)
Q Consensus 165 ~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~ 244 (520)
+|||+|+++++||+++|+|+++|||++||++++.+.+++|||||+|||++|+|||||++|||++|.|+.+..+...+..
T Consensus 160 ~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~- 238 (500)
T 3tsh_A 160 AGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTV- 238 (500)
T ss_dssp HTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEET-
T ss_pred ccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCc-
Confidence 9999999999999999999999999999999986667899999999888789999999999999999987777776655
Q ss_pred ccccchHHHHHHHHHHHccCCCCCceEEEEeeeecCCCCCcceEEEEEEEEEeCCcccHHHHHhhhCcccCCCcCcceec
Q 035812 245 QATSQGATDVIYKWQQVAPKLPGELFIRAMPKVVNGSRPLEKTVMVSFIGMFLGQISSLIPLMNQQFPELGLRAEDCHEM 324 (520)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~ 324 (520)
.+.+.+++.+|+.+.+.+|+++...+.... . ...+..+|.|+.+++.+.+.+.++.++.....+.++
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~---~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~ 305 (500)
T 3tsh_A 239 ---SEGAVDIINKWQVVAPQLPADLMIRIIAQG-------P---KATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEM 305 (500)
T ss_dssp ---TTTHHHHHHHHHHHGGGSCTTEEEEEEESS-------S---EEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEE
T ss_pred ---HHHHHHHHHHHHHhhhccChhhEEEEEecC-------C---CcEEEEEEecchhhhhhhhhhcchhccCCccccchh
Confidence 445678999999999999999877655421 1 345668899998888887777777777766677788
Q ss_pred ChHHHHHhhccccCCCchhhccCCCCCCCCcceeccccccCCCCHHHHHHHHHHHHhcC-ceEEEEeeCCCcCCCCCCCC
Q 035812 325 SWVESTLFWDQYRIGTSIKVLLNRSTDVKFSSKNKSDYVKNVIPKKALEEIWTKMINFG-NMWMQWNPYGGRMSEISESE 403 (520)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~-~~~i~~~~~GGav~~v~~~~ 403 (520)
+|.+.+.+..........+...++......+.+.++.++.++++++.++.+++.+...+ ...+.++++||++.++++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~a 385 (500)
T 3tsh_A 306 SWIQSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESA 385 (500)
T ss_dssp CHHHHHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTS
T ss_pred hhhccchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCcc
Confidence 88886654432221111122223322333445567778877788888888777655444 45677899999999999999
Q ss_pred CCCcccCCCeEEEEEEeeccccCccchhHHHHHHHHHHHhcccCccCCCCCcccCCCCCccCCCCCC-CCCccccccchh
Q 035812 404 TAFPHRAGNLFKIQYCALWEEEGINSTNLYTSKIRDFYASMAPYVSNSPREAFHNYRDLDIGNSYPS-NKTSLLRDADVY 482 (520)
Q Consensus 404 tAf~~Rd~~~~~i~~~~~W~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~g~Y~Ny~d~~l~~q~~~-~~~~~~~~~~~~ 482 (520)
|+|+||++.++.+++...|.++. .+++..+|++++++.+.++....+.++|+||+|.+++. +.. .....+.....|
T Consensus 386 ta~~~R~~~l~~i~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~-~~~~~~~~~~~~~~~w 462 (500)
T 3tsh_A 386 TPFPHRKGVLFNIQYVNYWFAPG--AAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGR-NEVVNDVSTYASGKVW 462 (500)
T ss_dssp SSCCCCTTCCEEEEEEEEECSTT--CCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCC-CCEETTEECHHHHHHH
T ss_pred CcCcccCCcEEEEEEEEecCCcc--hhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccc-cccccccccccccchH
Confidence 99999997778999999998874 45778899999999999987666678999999998763 210 000002233569
Q ss_pred hhccccccHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q 035812 483 GAKYFKGNYKRLVEVKTKVDPFNFFKNEQSIPPGLVNF 520 (520)
Q Consensus 483 ~~~y~g~n~~RL~~iK~kYDP~nvF~~~qsI~p~~~~~ 520 (520)
++.|||+||+||++||+||||+|+|+++|||||.++.+
T Consensus 463 ~~~Y~g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~~~ 500 (500)
T 3tsh_A 463 GQKYFKGNFERLAITKGKVDPTDYFRNEQSIPPLIKKY 500 (500)
T ss_dssp HHHHHGGGHHHHHHHHHHHCTTCCSCCTTSCCCCCC--
T ss_pred HHHhhhHHHHHHHHHHHHhCcccccCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999998863
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=3.3e-76 Score=625.84 Aligned_cols=456 Identities=23% Similarity=0.396 Sum_probs=369.0
Q ss_pred HHHHhhccCCCCCCCCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEe
Q 035812 11 LFLKCLLHDHVEPSNPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRS 90 (520)
Q Consensus 11 ~~~~~l~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g 90 (520)
+|.+||... ...|++|+|+.|+++++ +|+......|.+|++|+|++||+++|++|+++++|+++||
T Consensus 2 ~l~~cl~~~--------~~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~g 67 (473)
T 3rja_A 2 AIEACLSAA--------GVPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKS 67 (473)
T ss_dssp HHHHHHHHT--------TCCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEES
T ss_pred hHHHHHHhC--------CCcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 589999998 34699999999998753 4555456799999999999999999999999999999999
Q ss_pred CccCCCCCcccCCCCeEEEEeeccccEE-EeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCCccchhhhhcCCC
Q 035812 91 GGHDYEGLSYTSTVPFVVLDMFNLRKID-INIADETAWVQAGATIGELYYQISNVSKLHAFPAGVCPTIGAGGHITGGGY 169 (520)
Q Consensus 91 gGh~~~g~~~~~~~~gvvIdl~~~~~i~-~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~ 169 (520)
||||+.+.+....+++++|||++||+|. +|+++.+++||||+++++|+++|.++| .+.++.|.|+++||||+++|||+
T Consensus 68 gGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~ 146 (473)
T 3rja_A 68 GGHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGF 146 (473)
T ss_dssp SCCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCC
T ss_pred CCCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCC
Confidence 9999986554332358999999999996 999999999999999999999999987 47789999999999999999999
Q ss_pred CCCccccCccccceeEEEEEeecccEEe-eccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeeccccccc
Q 035812 170 GNLMRKYGLSSDNVVDAQLVDVEGRILN-RESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTTDQATS 248 (520)
Q Consensus 170 g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~ 248 (520)
|+.+++||+++|+|++++||++||++++ +..+++||||++|||+ |+|||||+++||++|.|+.+..+.+.+.+.. .
T Consensus 147 G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~--~ 223 (473)
T 3rja_A 147 GFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKN--K 223 (473)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCS--H
T ss_pred CcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCcc--H
Confidence 9999999999999999999999999997 5667899999999997 8999999999999999988777877776620 1
Q ss_pred chHHHHHHHHHHHcc-CCCCCceEEEEeeeecCCCCCcceEEEEEEEEEeCCcccHHHHHhhhCcccC-CCcCcce-ecC
Q 035812 249 QGATDVIYKWQQVAP-KLPGELFIRAMPKVVNGSRPLEKTVMVSFIGMFLGQISSLIPLMNQQFPELG-LRAEDCH-EMS 325 (520)
Q Consensus 249 ~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~~ 325 (520)
+++.+++.+|+++.. ++|+++++.+.+. +. . .+.+.++|+|+.+++.+++.+++...+ +...++. +++
T Consensus 224 ~~~~~~~~~~~~~~~~~~p~~l~~~~~~~--~~----~---~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~ 294 (473)
T 3rja_A 224 TSALKGIEAVEDYARWVAPREVNFRIGDY--GA----G---NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLN 294 (473)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTEEEEEEES--SS----S---CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEEC
T ss_pred HHHHHHHHHHHHHhhhCCChhHEEEEEEc--CC----C---cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccC
Confidence 236789999999988 8999998877764 11 1 156678999999999888876543333 3445667 899
Q ss_pred hHHHHHhhccccCCCchhhccCCCCCCCCcceeccccccCCCCHHHHHHHHHHHHhc-C-----ceEEEEeeCCC---cC
Q 035812 326 WVESTLFWDQYRIGTSIKVLLNRSTDVKFSSKNKSDYVKNVIPKKALEEIWTKMINF-G-----NMWMQWNPYGG---RM 396 (520)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~-~-----~~~i~~~~~GG---av 396 (520)
|.+.+.++.... ..+.... .....++.|+.+.. ++++++++.+++.+.+. + .+.++++++|| ++
T Consensus 295 ~~~~~~~~~~~~---~~~~~~~---~~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai 367 (473)
T 3rja_A 295 WIESVLSYSNFD---HVDFITP---QPVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQV 367 (473)
T ss_dssp HHHHHHHTSSSS---CCCCSSC---CCCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGG
T ss_pred HHHHHHhhhcCC---CcccccC---CCCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhh
Confidence 999776654211 1111100 00234667888764 69999999999888542 1 13578999998 67
Q ss_pred CCCCCCCCCCcccCCCeEEEEEEeeccc-cCccchhHHHHHHHHHHHhcccCccCCCCCcccCCCCCccCCCCCCCCCcc
Q 035812 397 SEISESETAFPHRAGNLFKIQYCALWEE-EGINSTNLYTSKIRDFYASMAPYVSNSPREAFHNYRDLDIGNSYPSNKTSL 475 (520)
Q Consensus 397 ~~v~~~~tAf~~Rd~~~~~i~~~~~W~~-~~~~~~~~~~~~i~~~~~~l~~~~~~~~~g~Y~Ny~d~~l~~q~~~~~~~~ 475 (520)
+++++++|||+||+ ..|.+++.+.|.+ + +.+++..+|++++++.+.+.....+.++|+||+|.+++.
T Consensus 368 ~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~~--------- 435 (473)
T 3rja_A 368 TKVTNAETAYPHRD-KLWLIQFYDRYDNNQ--TYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMDR--------- 435 (473)
T ss_dssp GGSCTTTSSCCCTT-CSEEEEEEEEECTTS--CCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSCH---------
T ss_pred cCCCCCCCccccCC-ccEEEEEEEEeCCCC--ccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCccccc---------
Confidence 88899999999999 5899999999964 3 233456678887777665443223457999999987531
Q ss_pred ccccchhhhccccccHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 035812 476 LRDADVYGAKYFKGNYKRLVEVKTKVDPFNFFKNEQSIPPG 516 (520)
Q Consensus 476 ~~~~~~~~~~y~g~n~~RL~~iK~kYDP~nvF~~~qsI~p~ 516 (520)
..|++.|||+||+||++||+||||+|+|+++|||+|+
T Consensus 436 ----~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 436 ----DYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp ----HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred ----hhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCC
Confidence 1399999999999999999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=1.3e-74 Score=616.27 Aligned_cols=457 Identities=22% Similarity=0.358 Sum_probs=355.8
Q ss_pred CCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCC
Q 035812 25 NPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTV 104 (520)
Q Consensus 25 ~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~ 104 (520)
++|.+.|++|+|+.|++++. .||.|| ...|.+||+|++++||+++|++|+++++||+||||||++.+.+...+
T Consensus 6 ~s~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~- 78 (501)
T 3pop_A 6 ASVPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR- 78 (501)
T ss_dssp ---CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-
T ss_pred ccCCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-
Confidence 45678899999999999864 556666 46999999999999999999999999999999999999998876543
Q ss_pred CeEEEEeeccccEEEeCCCCEEEEcCCCCHHHHHHHHHh-cCCcceecCCCCCCccchhhhhcCCCCCCccccCccccce
Q 035812 105 PFVVLDMFNLRKIDINIADETAWVQAGATIGELYYQISN-VSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYGLSSDNV 183 (520)
Q Consensus 105 ~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v 183 (520)
++++|||++||+|++|++.++++||||+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|
T Consensus 79 ~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v 156 (501)
T 3pop_A 79 RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHL 156 (501)
T ss_dssp CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGE
T ss_pred CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhE
Confidence 489999999999999999999999999999999999974 55 678999999999999999999999999999999999
Q ss_pred eEEEEEe--eccc--EEee----ccCCchhhhhhhccCCCCeEEEEEEEEEE----------EecC-ceEEEEEEeeccc
Q 035812 184 VDAQLVD--VEGR--ILNR----ESMGEDLFWAIRGGGGESFGVILAWKIKL----------VSVP-EKVTVFNVGKTTD 244 (520)
Q Consensus 184 ~~~~vV~--~~G~--~~~~----~~~~~dl~~a~rG~g~g~fGivt~~~~~~----------~p~~-~~~~~~~~~~~~~ 244 (520)
+++|||+ +||+ +++. +.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|.+.
T Consensus 157 ~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~ 236 (501)
T 3pop_A 157 HAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWA 236 (501)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGG
T ss_pred EEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchh
Confidence 9999999 8899 4432 35689999999998668999999999999 6654 4566667777653
Q ss_pred ccccchHHHHHHHHHHHcc--CCCCCc--eEEEEeeeecCCCCCcceEEEEEEEEEeCCcccHHHHHhhhCcc------c
Q 035812 245 QATSQGATDVIYKWQQVAP--KLPGEL--FIRAMPKVVNGSRPLEKTVMVSFIGMFLGQISSLIPLMNQQFPE------L 314 (520)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~--~~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~------l 314 (520)
+...+.+.+++..|++|.. ..|+++ .+...+..... ..+ .+.+..++.|+.+++.+++.+++.. +
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~ 311 (501)
T 3pop_A 237 MIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV-SSG----VLQLMVQQDADVDPEGEILARFVASLTEGTGV 311 (501)
T ss_dssp GCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG-GGC----EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSC
T ss_pred hcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC-CCC----eEEEEEEEeCChHHHHHHHHHHHHhhhhccCC
Confidence 2112234678888888764 456553 23222222110 111 2445567889887776666554322 2
Q ss_pred CCCcCcceecChHHHHHhhccccCCCchhhccCCCCCCCCcceeccccccCCCCHHHHHHHHHHHHhc---CceEEEEee
Q 035812 315 GLRAEDCHEMSWVESTLFWDQYRIGTSIKVLLNRSTDVKFSSKNKSDYVKNVIPKKALEEIWTKMINF---GNMWMQWNP 391 (520)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~---~~~~i~~~~ 391 (520)
.+... +.+++|.+...... .+.+.+ ....+++.|+.|+.+++++++++.+++.+... +.+.+++++
T Consensus 312 ~p~~~-~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (501)
T 3pop_A 312 VGIPR-GGVMSWLTGTRYMS-QADCGD---------VMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNS 380 (501)
T ss_dssp CCEEE-EEEEEHHHHHHHTC-BCSCGG---------GTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEE
T ss_pred Cccce-eEEeCHHHHHhhhc-CCCCCc---------ccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 22233 67899998665432 111100 01234677899988789999999999888653 246789999
Q ss_pred CCCcCCCCCCCCCCCcccCCCeEEEEEEeeccccCccchhHHHHHHHHHHHhcccCcc------CCCCCcccCCCCCccC
Q 035812 392 YGGRMSEISESETAFPHRAGNLFKIQYCALWEEEGINSTNLYTSKIRDFYASMAPYVS------NSPREAFHNYRDLDIG 465 (520)
Q Consensus 392 ~GGav~~v~~~~tAf~~Rd~~~~~i~~~~~W~~~~~~~~~~~~~~i~~~~~~l~~~~~------~~~~g~Y~Ny~d~~l~ 465 (520)
+||+++++++++|||+||+ ..|++++...|.++ +.++++.+|++++++.|.++.+ ..+.++|+||+|.+++
T Consensus 381 ~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~ 457 (501)
T 3pop_A 381 YGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLL 457 (501)
T ss_dssp CCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGG
T ss_pred cCcccccCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcccc
Confidence 9999999999999999999 68999999999866 4557889999999999976531 1246899999999876
Q ss_pred CCCCCCCCccccccchhhhccccccHHHHHHHHhhcCCCCCCCCCCCCCC
Q 035812 466 NSYPSNKTSLLRDADVYGAKYFKGNYKRLVEVKTKVDPFNFFKNEQSIPP 515 (520)
Q Consensus 466 ~q~~~~~~~~~~~~~~~~~~y~g~n~~RL~~iK~kYDP~nvF~~~qsI~p 515 (520)
. +..+++ +..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 458 ~--~~~~~~----~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 458 D--PARNRS----GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp C--TTTCCS----SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred c--cccccc----cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 3 211111 3449999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=2.3e-70 Score=587.87 Aligned_cols=461 Identities=24% Similarity=0.395 Sum_probs=347.8
Q ss_pred HHhhccCCCCCCCCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCc
Q 035812 13 LKCLLHDHVEPSNPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGG 92 (520)
Q Consensus 13 ~~~l~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggG 92 (520)
.+||... .+.|++|+|+.|++++ ...||.||. ..|.+||+|++++||+++|++|+++++||.|||||
T Consensus 24 ~~~l~~~--------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggG 90 (523)
T 2wdx_A 24 ERCLPPA--------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGG 90 (523)
T ss_dssp --CCCCC--------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred hhhcccC--------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 4898887 4689999999999986 236788884 48999999999999999999999999999999999
Q ss_pred cCCCCCcccCCCCeEEEEeeccccEEEeCCCCEEEEcCCCCHHHHHHHHHh-cCCcceecCCCCCCccchhhhhcCCCCC
Q 035812 93 HDYEGLSYTSTVPFVVLDMFNLRKIDINIADETAWVQAGATIGELYYQISN-VSKLHAFPAGVCPTIGAGGHITGGGYGN 171 (520)
Q Consensus 93 h~~~g~~~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~~~~~~g~~~~vgigG~~~ggg~g~ 171 (520)
|++.+.+.... ++++|||++||+|++|++..+|+||||++|.+|+++|.+ +| +.+++|.|++|||||+++|||+|+
T Consensus 91 h~~~g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~ 167 (523)
T 2wdx_A 91 HCFEDFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGP 167 (523)
T ss_dssp CCSSSSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCT
T ss_pred CCCCCCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCc
Confidence 99998776432 489999999999999999999999999999999999984 76 578889999999999999999999
Q ss_pred CccccCccccceeEEEEEeec--ccEEe---ecc-CCch--hhhhhhccCCCCeEEEEEEEEEE-----------EecCc
Q 035812 172 LMRKYGLSSDNVVDAQLVDVE--GRILN---RES-MGED--LFWAIRGGGGESFGVILAWKIKL-----------VSVPE 232 (520)
Q Consensus 172 ~~~~~G~~~d~v~~~~vV~~~--G~~~~---~~~-~~~d--l~~a~rG~g~g~fGivt~~~~~~-----------~p~~~ 232 (520)
++++||+++|+|+++|||++| |+++. +.. +++| ||||+|||++|+|||||+++||+ +|.|+
T Consensus 168 ~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~ 247 (523)
T 2wdx_A 168 LSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPP 247 (523)
T ss_dssp THHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCC
T ss_pred ccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCc
Confidence 999999999999999999965 99753 322 4555 99999987668999999999999 99876
Q ss_pred -eEEEEEEeecccccccchHHHHHHHHHHHccC--CCCCce--EEEEeeeecCCCCCcceEEEEEEEEEeCCcccHHHHH
Q 035812 233 -KVTVFNVGKTTDQATSQGATDVIYKWQQVAPK--LPGELF--IRAMPKVVNGSRPLEKTVMVSFIGMFLGQISSLIPLM 307 (520)
Q Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l 307 (520)
.+..+.+.|+++....+...+++++|++|... .|++.. +...+.... ...+.....+.+..+|.|+.++..+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~~~~~~l 326 (523)
T 2wdx_A 248 ATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGN-EVPGMGESGFMMPIQVDATRPDARRLL 326 (523)
T ss_dssp SEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC-CCTTCTTCSEEEEEEEETTSTTHHHHH
T ss_pred ccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEecc-CCCCCcceeEEEEEEEeCCHHHHHHHH
Confidence 35566666665211123346788888887653 566522 222222211 111210123455677889887776666
Q ss_pred hhhCcc----cC-CCcCcceecChHHHHHhhccccCCCchhhccCCCCCCCCcceeccccccCCCCHHHHHHHHHHHHhc
Q 035812 308 NQQFPE----LG-LRAEDCHEMSWVESTLFWDQYRIGTSIKVLLNRSTDVKFSSKNKSDYVKNVIPKKALEEIWTKMINF 382 (520)
Q Consensus 308 ~~~~~~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~ 382 (520)
.+++.. ++ +....+..++|.+....+ .. . ..+++.++.++.+.++.+.+..+++.+...
T Consensus 327 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 390 (523)
T 2wdx_A 327 DAHIEAVIDGVPPAEVPEPIEQRWLASTPGR-------------GG-R--GPASKTKAGYLRKRLTDRQIQAVYENMTHM 390 (523)
T ss_dssp HHHHHHHHTTCTTCBCCCCEEEETTSSCCCC-------------CS-S--CCEEEEEEEEESSCCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhcCCCccccceeccHHHHHHhh-------------cC-C--CCceeeecccccCCCCHHHHHHHHHHHHhc
Confidence 553221 23 223344456665421100 00 0 113455777776668888899998887643
Q ss_pred ---CceEEEEeeCCCcCCCCCCCCCCCcccCCCeEEEEEEeeccccCccchhHHHHHHHHHHHhcc------cCccCCCC
Q 035812 383 ---GNMWMQWNPYGGRMSEISESETAFPHRAGNLFKIQYCALWEEEGINSTNLYTSKIRDFYASMA------PYVSNSPR 453 (520)
Q Consensus 383 ---~~~~i~~~~~GGav~~v~~~~tAf~~Rd~~~~~i~~~~~W~~~~~~~~~~~~~~i~~~~~~l~------~~~~~~~~ 453 (520)
+.+.+.++++||++++++.++|||+||+ ..|++++...|.++ +.++.+.+|++++++.+. |+.+....
T Consensus 391 ~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~ 467 (523)
T 2wdx_A 391 DGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPNDVSD 467 (523)
T ss_dssp TTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBC
T ss_pred CCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCCCCC
Confidence 2356788999999999999999999999 68999999999876 355788999999999887 32111135
Q ss_pred CcccCCCCCccCCCCCCCCCccccccchhhhccccccHHHHHHHHhhcCCCCCCCCCCCCCC
Q 035812 454 EAFHNYRDLDIGNSYPSNKTSLLRDADVYGAKYFKGNYKRLVEVKTKVDPFNFFKNEQSIPP 515 (520)
Q Consensus 454 g~Y~Ny~d~~l~~q~~~~~~~~~~~~~~~~~~y~g~n~~RL~~iK~kYDP~nvF~~~qsI~p 515 (520)
++|+||+|.++++ +.++++ ...|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 468 g~Y~Ny~d~~~~~--~~~~~s----~~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 468 GAYINYPDSDLAD--PGLNTS----GVPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CCCTTSCCGGGGC--TTTCCS----SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cceecCCcccccc--cccccc----hhHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 7999999998642 211111 1138999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.4e-69 Score=581.91 Aligned_cols=466 Identities=24% Similarity=0.368 Sum_probs=345.1
Q ss_pred chhHHHHhhccCCCCCCCCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEE
Q 035812 8 NLELFLKCLLHDHVEPSNPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELR 87 (520)
Q Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~ 87 (520)
...+...|+... +..|++|+|+.|++++ +..||.||. ..|.+||+|++++||+++|++|+++++||.
T Consensus 17 ~~~~~~~~~~~~--------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 83 (521)
T 2ipi_A 17 WEFDGGACGART--------ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIA 83 (521)
T ss_dssp --------------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEE
T ss_pred hhccccccccCC--------CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEE
Confidence 345566788776 4579999999999986 236688884 489999999999999999999999999999
Q ss_pred EEeCccCCCCCcccCCCCeEEEEeeccccEEEeCCCCEEEEcCCCCHHHHHHHHH-hcCCcceecCCCCCCccchhhhhc
Q 035812 88 IRSGGHDYEGLSYTSTVPFVVLDMFNLRKIDINIADETAWVQAGATIGELYYQIS-NVSKLHAFPAGVCPTIGAGGHITG 166 (520)
Q Consensus 88 ~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~-~~g~~~~~~~g~~~~vgigG~~~g 166 (520)
||||||++.+.+.... ++++|||++||+|++|++..+|+||||++|.+|+++|. ++| +.+++|.|++|||||+++|
T Consensus 84 vrggGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~g 160 (521)
T 2ipi_A 84 VRSGGHCFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLG 160 (521)
T ss_dssp EESSCCCTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTT
T ss_pred EECCCcCCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccC
Confidence 9999999998765332 48999999999999999999999999999999999997 676 6789999999999999999
Q ss_pred CCCCCCccccCccccceeEEEEEeec--ccEEe---ecc-CCc--hhhhhhhccCCCCeEEEEEEEEEE-----------
Q 035812 167 GGYGNLMRKYGLSSDNVVDAQLVDVE--GRILN---RES-MGE--DLFWAIRGGGGESFGVILAWKIKL----------- 227 (520)
Q Consensus 167 gg~g~~~~~~G~~~d~v~~~~vV~~~--G~~~~---~~~-~~~--dl~~a~rG~g~g~fGivt~~~~~~----------- 227 (520)
||+|+++++||+++|+|+++|||++| |+++. +.. +++ |||||+|||++|+|||||+++||+
T Consensus 161 Gg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~ 240 (521)
T 2ipi_A 161 GGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQL 240 (521)
T ss_dssp TCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGS
T ss_pred CCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccc
Confidence 99999999999999999999999987 99742 322 455 599999997668999999999999
Q ss_pred EecCc-eEEEEEEeecccccccchHHHHHHHHHHHccC--CCCCc--eEEEEeeeecCCCCCcceEEEEEEEEEeCCccc
Q 035812 228 VSVPE-KVTVFNVGKTTDQATSQGATDVIYKWQQVAPK--LPGEL--FIRAMPKVVNGSRPLEKTVMVSFIGMFLGQISS 302 (520)
Q Consensus 228 ~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ 302 (520)
+|.|+ .+..+.+.|+++....+...+++++|++|... .|++. .+...+... ....+ .+.+...|.|+.++
T Consensus 241 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~-~~~~~----~~~~~~~~~g~~~~ 315 (521)
T 2ipi_A 241 LPKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLN-SRAAG----QILLDIQIDGGLDG 315 (521)
T ss_dssp SCBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEE-CTTSC----EEEEEEEEETTSTT
T ss_pred cCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEec-cCCCC----ceEEEEEeccCHHH
Confidence 99875 34555666655221122346788888887653 45552 222222221 11112 23445668888877
Q ss_pred HHHHHhhhCcc----cC-CCcCcceecChHHHHHhhccccCCCchhhccCCCCCCCCcceeccccccCCCCHHHHHHHHH
Q 035812 303 LIPLMNQQFPE----LG-LRAEDCHEMSWVESTLFWDQYRIGTSIKVLLNRSTDVKFSSKNKSDYVKNVIPKKALEEIWT 377 (520)
Q Consensus 303 ~~~~l~~~~~~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~ 377 (520)
..+++.+++.. ++ +....+..++|.+....+...+ .. ...++.++.++.++++.+.+..+++
T Consensus 316 ~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~s~~~~~~~~~~~i~~~~~ 382 (521)
T 2ipi_A 316 AEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDT------------GG-FDRTKSKGAYLRKPWTAAQAATLYR 382 (521)
T ss_dssp HHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCC------------TT-CCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCCC------------CC-CccceeeccccccCCCHHHHHHHHH
Confidence 66665543221 23 2334456678887543321100 00 0134456777766688899999998
Q ss_pred HHHhcC--ceEEEEeeCCCcCCCCCCCCCCCcccCCCeEEEEEEeeccccCccchhHHHHHHHHHHHhcccCcc------
Q 035812 378 KMINFG--NMWMQWNPYGGRMSEISESETAFPHRAGNLFKIQYCALWEEEGINSTNLYTSKIRDFYASMAPYVS------ 449 (520)
Q Consensus 378 ~~~~~~--~~~i~~~~~GGav~~v~~~~tAf~~Rd~~~~~i~~~~~W~~~~~~~~~~~~~~i~~~~~~l~~~~~------ 449 (520)
.+...+ .+.+.++++||++++++.++|||+||+ ..+.+++...|.++ +.++.+.+|++++++.+.....
T Consensus 383 ~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~~~ 459 (521)
T 2ipi_A 383 HLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPVPD 459 (521)
T ss_dssp HHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCCSS
T ss_pred HHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCccc
Confidence 887643 367889999999999999999999999 68999999999876 3457789999999998873221
Q ss_pred CCCCCcccCCCCCccCCCCCCCCCccccccchhhhccccccHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 035812 450 NSPREAFHNYRDLDIGNSYPSNKTSLLRDADVYGAKYFKGNYKRLVEVKTKVDPFNFFKNEQSIPPG 516 (520)
Q Consensus 450 ~~~~g~Y~Ny~d~~l~~q~~~~~~~~~~~~~~~~~~y~g~n~~RL~~iK~kYDP~nvF~~~qsI~p~ 516 (520)
....++|+||+|.++++ |....+ ...|++.|||+||+||++||+||||+|||+++|+|+|.
T Consensus 460 ~~~~g~Y~Ny~d~~~~~--~~~~~~----~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 460 DRTEGTFINYPDVDLVD--ERWNTS----GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SSBCCCCTTSCCGGGGC--TTTSCC----SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred CCCCceEeCCCCccccc--cccccc----hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 11357999999998642 210011 12399999999999999999999999999999999984
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=5.7e-69 Score=577.46 Aligned_cols=455 Identities=23% Similarity=0.394 Sum_probs=344.2
Q ss_pred cceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeE
Q 035812 28 SELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFV 107 (520)
Q Consensus 28 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gv 107 (520)
...|++|+|+.|+++++ .||.||. ..|.+||+|++++||+++|++|+++++||+||||||++.+.+.... +++
T Consensus 33 ~~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~gv 105 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD-VRV 105 (530)
T ss_dssp -CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT-CCE
T ss_pred CceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC-CeE
Confidence 35799999999999864 5577774 5899999999999999999999999999999999999998665432 489
Q ss_pred EEEeeccccEEEeCCCCEEEEcCCCCHHHHHHHHHh-cCCcceecCCCCCCccchhhhhcCCCCCCccccCccccceeEE
Q 035812 108 VLDMFNLRKIDINIADETAWVQAGATIGELYYQISN-VSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDA 186 (520)
Q Consensus 108 vIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~ 186 (520)
+|||++||+|++|+++.+|+||||++|.+|+++|.+ +| +.+++|.|++|||||+++|||+|+++++||+++|+|+++
T Consensus 106 vIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 183 (530)
T 2y3s_A 106 VMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAV 183 (530)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEE
T ss_pred EEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeE
Confidence 999999999999999999999999999999999985 66 678899999999999999999999999999999999999
Q ss_pred EEEeec--ccEE--e-ecc-CCc--hhhhhhhccCCCCeEEEEEEEEEE------------EecCc-eEEEEEEeecccc
Q 035812 187 QLVDVE--GRIL--N-RES-MGE--DLFWAIRGGGGESFGVILAWKIKL------------VSVPE-KVTVFNVGKTTDQ 245 (520)
Q Consensus 187 ~vV~~~--G~~~--~-~~~-~~~--dl~~a~rG~g~g~fGivt~~~~~~------------~p~~~-~~~~~~~~~~~~~ 245 (520)
|||++| |+++ + +.. +++ |||||+||||+|+|||||+++||+ +|.|+ .+..+.+.|.++.
T Consensus 184 evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 263 (530)
T 2y3s_A 184 EVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEG 263 (530)
T ss_dssp EEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTT
T ss_pred EEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccc
Confidence 999955 9974 2 332 455 499999998668999999999999 88875 4555666665522
Q ss_pred cccchHHHHHHHHHHHccC--CCCCc--eEEEEeeeecCCCCCcceEEEEEEEEEeCCcccHHHHHhhhCc---c-cC-C
Q 035812 246 ATSQGATDVIYKWQQVAPK--LPGEL--FIRAMPKVVNGSRPLEKTVMVSFIGMFLGQISSLIPLMNQQFP---E-LG-L 316 (520)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~--~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~---~-l~-~ 316 (520)
...+...++++.|++|... .|++. .....+..... ... .+.+...|.|+.++..+++.+++. . ++ +
T Consensus 264 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~ 338 (530)
T 2y3s_A 264 LDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS---QSG--ALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQ 338 (530)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG---GGS--EEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSC
T ss_pred cCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC---CCC--cEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 1123346788888887643 45552 12222222110 111 234456788888777666654322 1 23 2
Q ss_pred CcCcceecChHHHHHhhccccCCCchhhccCCCCCCCCcceeccccccCCCCHHHHHHHHHHHHhcC----ceEEEEeeC
Q 035812 317 RAEDCHEMSWVESTLFWDQYRIGTSIKVLLNRSTDVKFSSKNKSDYVKNVIPKKALEEIWTKMINFG----NMWMQWNPY 392 (520)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~----~~~i~~~~~ 392 (520)
....+..++|.+....+...+.+ . .. ..++.++.++.++++++.++.+++.+...+ .+.+.++++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~--------~--~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 407 (530)
T 2y3s_A 339 PHSDTRRLPWLHSTRWPGIAGDG--------D--MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAY 407 (530)
T ss_dssp CEEEEEEEEHHHHTTCHHHHCCC--------C--CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEEC
T ss_pred ccceeeeccHHHHHHhhcCCCCC--------c--cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEec
Confidence 33455677887754322111110 0 01 234557777776688899999998887532 367889999
Q ss_pred CCcCCCCCCCCCCCcccCCCeEEEEEEeeccccCccchhHHHHHHHHHHHhcccCcc------CCCCCcccCCCCCccCC
Q 035812 393 GGRMSEISESETAFPHRAGNLFKIQYCALWEEEGINSTNLYTSKIRDFYASMAPYVS------NSPREAFHNYRDLDIGN 466 (520)
Q Consensus 393 GGav~~v~~~~tAf~~Rd~~~~~i~~~~~W~~~~~~~~~~~~~~i~~~~~~l~~~~~------~~~~g~Y~Ny~d~~l~~ 466 (520)
||++++++.++|||+||+ ..|.+++...|.++ +.++.+.+|++++++.+.+... ....|+|+||+|.++++
T Consensus 408 GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~ 484 (530)
T 2y3s_A 408 GGKVNAVPADRTAVAQRD-SILKIVYVTTWEDP--AQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLAD 484 (530)
T ss_dssp CGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCT--TCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGC
T ss_pred CCccccCCCCcCcccccc-cceeEEEEEecCCC--cchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccccc
Confidence 999999999999999999 68999999999876 3457789999999998873211 11357999999998642
Q ss_pred CCCCCCCccccccchhhhccccccHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 035812 467 SYPSNKTSLLRDADVYGAKYFKGNYKRLVEVKTKVDPFNFFKNEQSIPPG 516 (520)
Q Consensus 467 q~~~~~~~~~~~~~~~~~~y~g~n~~RL~~iK~kYDP~nvF~~~qsI~p~ 516 (520)
+.++++ ...|++.|||+||+||++||+||||+|||+++|+|+|.
T Consensus 485 --~~~~~s----~~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 485 --EEWNTS----GVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp --TTTCCS----SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred --cccccc----hhHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 111111 12399999999999999999999999999999999975
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=1.7e-69 Score=579.51 Aligned_cols=459 Identities=23% Similarity=0.434 Sum_probs=355.5
Q ss_pred ccchhHHHHhhccCCCCCCCCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCe
Q 035812 6 DSNLELFLKCLLHDHVEPSNPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLE 85 (520)
Q Consensus 6 ~~~~~~~~~~l~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~ 85 (520)
+...+.|++||.+. ...+++|+++.|+... .+|+......|.+||+|++++||+++|++|+++++|
T Consensus 3 ~~~~~~l~~~l~~~--------~~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~ 68 (503)
T 1zr6_A 3 EAEFNSINACLAAA--------DVEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQ 68 (503)
T ss_dssp CCTTCHHHHHHHHT--------TCEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHhhCcC--------CceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCe
Confidence 34667899999876 2368999999999763 255554557999999999999999999999999999
Q ss_pred EEEEeCccCCCCCcccCCCCeEEEEeeccccEEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCCccchhhhh
Q 035812 86 LRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKIDINIADETAWVQAGATIGELYYQISNVSKLHAFPAGVCPTIGAGGHIT 165 (520)
Q Consensus 86 ~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ 165 (520)
|+|||||||+.+.+.+..+++++|||++||+|++| ++++|+||||+++.+|+++|.+++ ++.+|.|.|++|||||+++
T Consensus 69 ~~v~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~ 146 (503)
T 1zr6_A 69 ISAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVL 146 (503)
T ss_dssp EEEESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHH
T ss_pred EEEECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhc
Confidence 99999999999866542224899999999999999 888999999999999999997775 5788999999999999999
Q ss_pred cCCCCCCccccCccccceeEEEEEeecccEEe-eccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeeccc
Q 035812 166 GGGYGNLMRKYGLSSDNVVDAQLVDVEGRILN-RESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTTD 244 (520)
Q Consensus 166 ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~ 244 (520)
|||+|+++++||+++|+|+++|||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+....+.+.+.++
T Consensus 147 gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~ 225 (503)
T 1zr6_A 147 GGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWN 225 (503)
T ss_dssp HCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCC
T ss_pred CCCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCC
Confidence 99999999999999999999999999999997 5567899999999999 699999999999999998776677666552
Q ss_pred ccccchHHHHHHHHHHHccC-CCCCceEEEEeeeecCCCCCcceEEEEEEEEEeCCcccHHHHHhhhCcccCC--CcCcc
Q 035812 245 QATSQGATDVIYKWQQVAPK-LPGELFIRAMPKVVNGSRPLEKTVMVSFIGMFLGQISSLIPLMNQQFPELGL--RAEDC 321 (520)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~ 321 (520)
.+.+.+++.+|+++... +|++++..+.+.. . .+.+..+|+|+.++..+++.+++..++. ...++
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------~----~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~ 292 (503)
T 1zr6_A 226 ---RKQHVAGLKALQDWAQNTMPRELSMRLEINA------N----ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKL 292 (503)
T ss_dssp ---HHHHHHHHHHHHHHHHHTCCTTBCCEEEEET------T----EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred ---HHHHHHHHHHHHHHHhhcCChhHEEEEEEeC------C----eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCce
Confidence 23457889999998875 8888877665532 1 3456678999988887777664333443 12345
Q ss_pred eecChHHHHHhhccccCCCchhhccCCCCCCCCcceeccccccCCCCHHHHHHHHHHHH-hcC----c-eEEEEeeCCC-
Q 035812 322 HEMSWVESTLFWDQYRIGTSIKVLLNRSTDVKFSSKNKSDYVKNVIPKKALEEIWTKMI-NFG----N-MWMQWNPYGG- 394 (520)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~-~~~----~-~~i~~~~~GG- 394 (520)
..++|.+....+.. +..... ......+..++.++.++.+ ++.+.++.+++.+. ..+ . +.+.++++||
T Consensus 293 ~~~~~~~~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~ 366 (503)
T 1zr6_A 293 VETDWYGQINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGK 366 (503)
T ss_dssp EEECHHHHHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCST
T ss_pred eeCCHHHHHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCc
Confidence 56788764432211 000000 0011112345667777776 88888999988886 432 1 3577899999
Q ss_pred --cCCCCCCCCCCCcccCCCeEEEEEEeec-----cccCccchhHHHHHHHHHHHhcccCccCCCCCcccCCCCCccCCC
Q 035812 395 --RMSEISESETAFPHRAGNLFKIQYCALW-----EEEGINSTNLYTSKIRDFYASMAPYVSNSPREAFHNYRDLDIGNS 467 (520)
Q Consensus 395 --av~~v~~~~tAf~~Rd~~~~~i~~~~~W-----~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~g~Y~Ny~d~~l~~q 467 (520)
++.++++++|+|+||+ ..|++++...| .++ +.++...+|++++.+.+.........|+|+||+|.+++.
T Consensus 367 ~~av~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~~- 442 (503)
T 1zr6_A 367 NSALAAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTS--PYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTK- 442 (503)
T ss_dssp TCSGGGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCT--TTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCCH-
T ss_pred hhhhcCCCcccCCccccc-ceeEEEEEeeeccccCCCc--cchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCccccc-
Confidence 8889988999999999 58888886666 222 123445677777766655432111237999999987430
Q ss_pred CCCCCCccccccchhhhccccccHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 035812 468 YPSNKTSLLRDADVYGAKYFKGNYKRLVEVKTKVDPFNFFKNEQSIPPG 516 (520)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~y~g~n~~RL~~iK~kYDP~nvF~~~qsI~p~ 516 (520)
..|++.|||+||+||++||+||||+|||+++|+|+|.
T Consensus 443 ------------~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~ 479 (503)
T 1zr6_A 443 ------------EEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPI 479 (503)
T ss_dssp ------------HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred ------------chHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCch
Confidence 1399999999999999999999999999999999875
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.5e-66 Score=552.00 Aligned_cols=436 Identities=21% Similarity=0.287 Sum_probs=333.8
Q ss_pred cceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeE
Q 035812 28 SELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFV 107 (520)
Q Consensus 28 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gv 107 (520)
++.|++|+|+.|++++. +|+......|.+|++|++++||+++|++|+++++|+.|||||||+.+.+... +++
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~--~gv 84 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND--GGI 84 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS--SSE
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC--CeE
Confidence 67899999999998643 5666566799999999999999999999999999999999999999877544 389
Q ss_pred EEEeeccccEEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecCCCCCCccchhhhhcCCCCCCccccCccccceeEEE
Q 035812 108 VLDMFNLRKIDINIADETAWVQAGATIGELYYQISNVSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQ 187 (520)
Q Consensus 108 vIdl~~~~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~ 187 (520)
+|||++||+|++|+++.+|+||||++|.+|+++|.++| +.+++|.|+++||||+++|||+|+++++||+++|+|+++|
T Consensus 85 vi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~ 162 (459)
T 2bvf_A 85 VLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGAT 162 (459)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEE
Confidence 99999999999999999999999999999999999986 7889999999999999999999999999999999999999
Q ss_pred EEeecccEEe-eccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeecccccccchHH--HHHHHHHHHccC
Q 035812 188 LVDVEGRILN-RESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTTDQATSQGAT--DVIYKWQQVAPK 264 (520)
Q Consensus 188 vV~~~G~~~~-~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 264 (520)
||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+.+....+.|.. ..+. ++++.|+++...
T Consensus 163 vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 236 (459)
T 2bvf_A 163 LVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAP-----SVSELAGLLTSLLDALNE 236 (459)
T ss_dssp EECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECC-----CHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEech-----HHhhHHHHHHHHHHHHHh
Confidence 9999999997 6667899999999988 89999999999999997666555555654 2244 788889888877
Q ss_pred CCCCceEEEEeeeecCCCCCcceEEEEEEEEEeCCcccHHHHHhhhCcccC-CCcCcceecChHHHHHhhccccCCCchh
Q 035812 265 LPGELFIRAMPKVVNGSRPLEKTVMVSFIGMFLGQISSLIPLMNQQFPELG-LRAEDCHEMSWVESTLFWDQYRIGTSIK 343 (520)
Q Consensus 265 ~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (520)
+|+.+...+ ... ....+. ..+.+...|.|+.++..+.+.+ |.+++ +....+..++|.+....... .+
T Consensus 237 ~~~~~~~~~-~~~--~~~~~~--~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 304 (459)
T 2bvf_A 237 MADHIYPSV-FVG--VDENRA--PSVTVCVGHLGGLDIAERDIAR-LRGLGRTVSDSIAVRSYDEVVALNAE------VG 304 (459)
T ss_dssp TTTTCCCEE-EEE--ECTTCC--EEEEEEEECCSCHHHHHHHHHH-HHTTSCCSEECCEEECHHHHHHHHHH------HS
T ss_pred CcHhhcccc-ccC--cccCCC--ceEEEEEEEeCCHHHHHHHHHH-HHHhCcchhcceeecCHHHHHhcccc------cc
Confidence 777774333 111 111122 2345566888988776666655 34443 33345567788774332110 00
Q ss_pred hccCCCCCCCCccee-ccccccCCCCHHHHHHHHHHHHhcC-ce-EEEEeeCCCcCCCCCCCCCCCcccCCCeEEEEEEe
Q 035812 344 VLLNRSTDVKFSSKN-KSDYVKNVIPKKALEEIWTKMINFG-NM-WMQWNPYGGRMSEISESETAFPHRAGNLFKIQYCA 420 (520)
Q Consensus 344 ~~~~~~~~~~~~~~~-~s~~~~~~~~~~~i~~~~~~~~~~~-~~-~i~~~~~GGav~~v~~~~tAf~~Rd~~~~~i~~~~ 420 (520)
. ..... ..+.. ++.++.+.++.+.++.+++.+.+.+ .. .+.++.+||++.+ .+.|||+||+. .| +++..
T Consensus 305 ~---~~~~~-~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~~-~~-~~~~~ 376 (459)
T 2bvf_A 305 S---FEDGM-SNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRDA-MG-VLALA 376 (459)
T ss_dssp C---CCCSC-EEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCSS-CE-EEEEE
T ss_pred c---CCCCC-cceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCCc-ce-EEEEE
Confidence 0 00111 11222 4566553355566666655554433 22 2334444888776 56799999994 67 88899
Q ss_pred eccccCccchhHHHHHHHHHHHhcccCccCCCCCcccCCCCCccCCCCCCCCCccccccchhhhcccccc-HHHHHHHHh
Q 035812 421 LWEEEGINSTNLYTSKIRDFYASMAPYVSNSPREAFHNYRDLDIGNSYPSNKTSLLRDADVYGAKYFKGN-YKRLVEVKT 499 (520)
Q Consensus 421 ~W~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~g~Y~Ny~d~~l~~q~~~~~~~~~~~~~~~~~~y~g~n-~~RL~~iK~ 499 (520)
.|.++. ..++.+.+|++++++.+.++......|+|+||+|.+.+ .|.+.|||+| |+||++||+
T Consensus 377 ~w~~~~-~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~~---------------~~~~~~yG~~n~~rL~~iK~ 440 (459)
T 2bvf_A 377 EWSGAA-PGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVTA---------------EMVAEVYKPEVYSRLAAVKR 440 (459)
T ss_dssp EECTTS-TTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCCH---------------HHHHHHHCHHHHHHHHHHHH
T ss_pred EeCCCc-cchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcch---------------HHHHHHhCcchHHHHHHHHH
Confidence 998763 13456789999999999988421124799999997621 2899999987 999999999
Q ss_pred hcCCCCCCCCCCCCCC
Q 035812 500 KVDPFNFFKNEQSIPP 515 (520)
Q Consensus 500 kYDP~nvF~~~qsI~p 515 (520)
||||+|+|+++|+|+|
T Consensus 441 kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 441 EYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHCTTCCCCSSSCCCC
T ss_pred HhCcccccCCCCCCCC
Confidence 9999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.1e-40 Score=357.52 Aligned_cols=217 Identities=17% Similarity=0.233 Sum_probs=174.4
Q ss_pred chhHHHHhhccCCCCCCCCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHH--C-CC
Q 035812 8 NLELFLKCLLHDHVEPSNPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQ--A-GL 84 (520)
Q Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~--~-~~ 84 (520)
..+.|.+||..... .+.|.+ +...+.. +...|+......|.+|++|+|++||+++|++|++ + ++
T Consensus 30 ~~~~~~~~l~~~~~------~~~v~~-~~~~~~~------~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~ 96 (534)
T 1w1o_A 30 RGRPWPASLAALAL------DGKLRT-DSNATAA------ASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPY 96 (534)
T ss_dssp ----------CTTT------TTCEEC-SHHHHHH------TSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCC
T ss_pred chHHHHHHHHhcCC------CceEec-CHHHHHH------HhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCc
Confidence 44578888888422 345665 3333332 2335666566789999999999999999999998 6 99
Q ss_pred eEEEEeCccCCCCCcccCCCCeEEEEeeccccE------EEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecC-CCCCC
Q 035812 85 ELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKI------DINIADETAWVQAGATIGELYYQISNVSKLHAFPA-GVCPT 157 (520)
Q Consensus 85 ~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i------~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~-g~~~~ 157 (520)
|+++||||||+.|.+.+.+ +++|||++||+| ++|+++.+++||||++|.+|++++.++| +..+. +.+..
T Consensus 97 ~v~~~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~ 172 (534)
T 1w1o_A 97 TIAFRGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLY 172 (534)
T ss_dssp CEEEESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCC
T ss_pred eEEEECCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCC
Confidence 9999999999998887654 899999999984 8888889999999999999999999987 44444 34467
Q ss_pred ccchhhhhcCCCCCCccccCccccceeEEEEEeecccEEe-eccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEEE
Q 035812 158 IGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILN-RESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTV 236 (520)
Q Consensus 158 vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~ 236 (520)
++|||.+.+||.|..+++||.++|+|+++|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+....
T Consensus 173 ~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~ 251 (534)
T 1w1o_A 173 LTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARW 251 (534)
T ss_dssp SBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEE
T ss_pred EEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEE
Confidence 8899999999999999999999999999999999999997 5567899999999998 7999999999999999987655
Q ss_pred EEEeec
Q 035812 237 FNVGKT 242 (520)
Q Consensus 237 ~~~~~~ 242 (520)
+.+.|.
T Consensus 252 ~~~~~~ 257 (534)
T 1w1o_A 252 VRFVYT 257 (534)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 555554
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=1.9e-33 Score=301.88 Aligned_cols=188 Identities=23% Similarity=0.344 Sum_probs=162.0
Q ss_pred cccCCCCCCCccEEEecCCHHHHHHHHHHHHH-CCCeEEEEeCccCCCCCcccCCCCeEEEEeeccccEEEeC-----CC
Q 035812 50 RRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQ-AGLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKIDINI-----AD 123 (520)
Q Consensus 50 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~-~~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i~~d~-----~~ 123 (520)
..|+......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+...+ +|+|||++||+|++|. +.
T Consensus 52 ~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~ 129 (524)
T 2exr_A 52 RDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGD 129 (524)
T ss_dssp CCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSS
T ss_pred ccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCC
Confidence 35665556789999999999999999999996 9999999999999998876544 8999999999987776 55
Q ss_pred --CEEEEcCCCCHHHHHHHHH-hcCCcceec-CCCCCCccchhhhhcCCCCCCccccCccccceeEEEEEeecccEEe-e
Q 035812 124 --ETAWVQAGATIGELYYQIS-NVSKLHAFP-AGVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILN-R 198 (520)
Q Consensus 124 --~~v~v~aG~~~~~l~~~l~-~~g~~~~~~-~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~ 198 (520)
.+++||||++|.++++.+. ++| +..+ .+.++.++|||++.++|.|..+.+||.++|+|++++||++||++++ .
T Consensus 130 ~~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~ 207 (524)
T 2exr_A 130 ATAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCS 207 (524)
T ss_dssp SSEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEE
T ss_pred CceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEEC
Confidence 7999999999999866655 877 4422 2445678999999999999999999999999999999999999997 5
Q ss_pred ccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeec
Q 035812 199 ESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKT 242 (520)
Q Consensus 199 ~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~ 242 (520)
...|+||||++||+. |+|||||+++||++|.|+....+.+.|.
T Consensus 208 ~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~ 250 (524)
T 2exr_A 208 EIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYT 250 (524)
T ss_dssp SSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEES
T ss_pred CCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeC
Confidence 556899999999998 8999999999999999987665556554
No 13
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=3.1e-34 Score=315.78 Aligned_cols=191 Identities=23% Similarity=0.201 Sum_probs=169.8
Q ss_pred cCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCC---CCeEEEEeeccccE-EEeCCCCEEE
Q 035812 52 FLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTST---VPFVVLDMFNLRKI-DINIADETAW 127 (520)
Q Consensus 52 ~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~---~~gvvIdl~~~~~i-~~d~~~~~v~ 127 (520)
|....+..|.+||+|+|++||+++|++|+++++||++|||||++.|...+.. .++|+|||++||+| +||+++.+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 4555567999999999999999999999999999999999999887655431 25799999999998 9999999999
Q ss_pred EcCCCCHHHHHHHHHhcCCcceecCCCCCCccchhhhhcCCCCCCccccCccccceeEEEEEeecccEEe-----eccCC
Q 035812 128 VQAGATIGELYYQISNVSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILN-----RESMG 202 (520)
Q Consensus 128 v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-----~~~~~ 202 (520)
||||+++.+|.++|.++|+.+++.+++...++|||++++++.|+.+.+||.+.|+|+++|||++||++++ +...+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999986555567888889999999999999999999999999999999999999985 23457
Q ss_pred chhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeecc
Q 035812 203 EDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTT 243 (520)
Q Consensus 203 ~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~ 243 (520)
+||+|+++|+. |+|||||+++|||+|.|+....+.+.|..
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d 397 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPN 397 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESS
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCC
Confidence 89999999998 89999999999999999987666666643
No 14
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.9e-33 Score=295.35 Aligned_cols=205 Identities=23% Similarity=0.316 Sum_probs=174.9
Q ss_pred cccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeEEEEeeccccE-EEeCCCCEEEE
Q 035812 50 RRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKI-DINIADETAWV 128 (520)
Q Consensus 50 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i-~~d~~~~~v~v 128 (520)
..|+......|.+|++|+|++||+++|++|+++++|++++|||||+.|.+.... ++++|||++||+| ++|+++.+++|
T Consensus 42 ~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V 120 (476)
T 3pm9_A 42 TEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITV 120 (476)
T ss_dssp BCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEE
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEE
Confidence 356655567899999999999999999999999999999999999998877643 5899999999999 89999999999
Q ss_pred cCCCCHHHHHHHHHhcCCcceecCCCCCCccchhhhhcCCCCCCccccCccccceeEEEEEeecccEEe------eccCC
Q 035812 129 QAGATIGELYYQISNVSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILN------RESMG 202 (520)
Q Consensus 129 ~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~------~~~~~ 202 (520)
|||++|.+|+++|.++|+.+++.++++..++|||++.+++.|+.+.+||.++|+|++++||++||++++ +...+
T Consensus 121 ~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g 200 (476)
T 3pm9_A 121 EAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTG 200 (476)
T ss_dssp ETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSS
T ss_pred CCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCC
Confidence 999999999999999874333345777789999999999999999999999999999999999999996 13356
Q ss_pred chhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeecccccccchHHHHHHHHHH
Q 035812 203 EDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTTDQATSQGATDVIYKWQQ 260 (520)
Q Consensus 203 ~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (520)
+||+|+++|++ |+|||||+++||++|.|+......+.|.. .+++.+.+..++.
T Consensus 201 ~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~----~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 201 YDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQS----PDDALKLLGIAQG 253 (476)
T ss_dssp CCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESC----HHHHHHHHHHHHH
T ss_pred cCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCC----HHHHHHHHHHHHH
Confidence 89999999998 89999999999999999876655555543 3334555555543
No 15
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.98 E-value=9.4e-31 Score=274.46 Aligned_cols=174 Identities=20% Similarity=0.261 Sum_probs=155.0
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeEEEEeeccccE-EEeCCCCEEEEc
Q 035812 51 RFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKI-DINIADETAWVQ 129 (520)
Q Consensus 51 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~ 129 (520)
.|+......|.+|++|+|++||+++|++| +|+.++|||||+.+.+.. ..++++|||++||+| ++|+++++|+||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~-~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEP-GDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCC-CTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccC-CCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 57777778999999999999999999998 899999999999887762 224899999999998 999999999999
Q ss_pred CCCCHHHHHHHHHhcCCcceec-CCCCCCccchhhhhcCCCCCCccccCccccceeEEEEEeecccEEe-eccCCchhhh
Q 035812 130 AGATIGELYYQISNVSKLHAFP-AGVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILN-RESMGEDLFW 207 (520)
Q Consensus 130 aG~~~~~l~~~l~~~g~~~~~~-~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~~~~dl~~ 207 (520)
||+++.+|.++|.++|+ .++ .+.++.++|||.+.+|++|.. .+||.++|+|+++++|++||++++ +..+|+ ||
T Consensus 87 aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~ 161 (422)
T 2vfr_A 87 GGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FG 161 (422)
T ss_dssp TTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GG
T ss_pred CCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cc
Confidence 99999999999999974 455 378888999999999999976 699999999999999999999997 444455 89
Q ss_pred hhhccCCCCeEEEEEEEEEEEecCceEE
Q 035812 208 AIRGGGGESFGVILAWKIKLVSVPEKVT 235 (520)
Q Consensus 208 a~rG~g~g~fGivt~~~~~~~p~~~~~~ 235 (520)
+++|+. |+|||||+++||++|.|+...
T Consensus 162 ~~~g~~-G~lGvit~~~l~l~p~~~~~~ 188 (422)
T 2vfr_A 162 GAVTSL-GALGVVTSLTLDLEPAYEMEQ 188 (422)
T ss_dssp GTSSCT-TTTCEEEEEEEECEECCEEEE
T ss_pred eEEecC-CCCEEEEEEEEEEEecCceEE
Confidence 999998 899999999999999987543
No 16
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=1e-31 Score=290.68 Aligned_cols=185 Identities=21% Similarity=0.233 Sum_probs=159.8
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCC--CCeEEEEeeccccE-EEeCCCCEEEEcCCCC
Q 035812 57 TPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTST--VPFVVLDMFNLRKI-DINIADETAWVQAGAT 133 (520)
Q Consensus 57 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~--~~gvvIdl~~~~~i-~~d~~~~~v~v~aG~~ 133 (520)
...|.+|++|+|++||+++|++|+++++|++++|||||+.|.+.... .++|+|||++||+| ++|+++.+++||||++
T Consensus 135 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~ 214 (584)
T 2uuu_A 135 KNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIM 214 (584)
T ss_dssp CCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCB
T ss_pred CCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCc
Confidence 45899999999999999999999999999999999999987765431 25899999999999 8999999999999999
Q ss_pred HHHHHHHHHhcCCcceecCCCCCCccchhhhhcCCCCCCccccCccccceeEEEEEeecccEEe----eccCCchhhhhh
Q 035812 134 IGELYYQISNVSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILN----RESMGEDLFWAI 209 (520)
Q Consensus 134 ~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~----~~~~~~dl~~a~ 209 (520)
+.+|+++|.++|+.+...+++...++|||++++|+.|+.+.+||.++|+|++++||++||++++ +...++||+|++
T Consensus 215 ~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~ 294 (584)
T 2uuu_A 215 GPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHII 294 (584)
T ss_dssp HHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHH
T ss_pred HHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhh
Confidence 9999999999874322222334557899999999999999999999999999999999999875 344689999999
Q ss_pred hccCCCCeEEEEEEEEEEEecCceEEEEEEeec
Q 035812 210 RGGGGESFGVILAWKIKLVSVPEKVTVFNVGKT 242 (520)
Q Consensus 210 rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~ 242 (520)
+|++ |+|||||+++||++|.|+....+.+.|.
T Consensus 295 ~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~ 326 (584)
T 2uuu_A 295 LGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFP 326 (584)
T ss_dssp TTCT-TSSCEEEEEEEECEECCSEEEEEEEEES
T ss_pred ccCC-CCcEEEEEEEEEEEecccceEEEEEEcC
Confidence 9998 8999999999999999987666666554
No 17
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.97 E-value=1.9e-31 Score=282.56 Aligned_cols=200 Identities=18% Similarity=0.251 Sum_probs=168.1
Q ss_pred cccCCCCCCCccEEEecCCHHHHHHHHHHHHHC--CCeEEEEeCccCCCCCcccCCCCeEEEEeeccccE-EEeCCCCEE
Q 035812 50 RRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQA--GLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKI-DINIADETA 126 (520)
Q Consensus 50 ~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~--~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i-~~d~~~~~v 126 (520)
.+|.. ....|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+... +|++|||++||+| ++|+++++|
T Consensus 34 ~~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v 110 (481)
T 4feh_A 34 TGWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLV 110 (481)
T ss_dssp CCTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEE
T ss_pred ecccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEE
Confidence 35744 477899999999999999999999999 79999999999997765433 4899999999999 999999999
Q ss_pred EEcCCCCHHHHHHHHHhcCCcceecCCCCCCccchhhhhcCCCCCCccccCccccceeEEEEEeecccEEe-ecc-CCch
Q 035812 127 WVQAGATIGELYYQISNVSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILN-RES-MGED 204 (520)
Q Consensus 127 ~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~~-~~~d 204 (520)
+||||+++.+|+++|.++|+.+...+|. ..++|||.+.+|++|..++.||..+|+|++++||++||++++ +.. +|+|
T Consensus 111 ~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~d 189 (481)
T 4feh_A 111 DIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAE 189 (481)
T ss_dssp EEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHH
T ss_pred EEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChH
Confidence 9999999999999999997433222444 567899999999999999999999999999999999999997 555 6899
Q ss_pred hhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEEeecccccccchHHHHHHHHHH
Q 035812 205 LFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTTDQATSQGATDVIYKWQQ 260 (520)
Q Consensus 205 l~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (520)
|||++|||+ |+|||||+++||++|.|+....... +.. .+..++++.|++
T Consensus 190 Lf~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~~~-~~~-----~~l~~~~~~~~~ 238 (481)
T 4feh_A 190 LFWATVGGN-GLTGIIMRATIEMTPTSTAYFIADG-DVT-----ASLDETIALHSD 238 (481)
T ss_dssp HHHHHTTCT-TTTCEEEEEEEECEECSCSEEEEEE-EEC-----SSHHHHHHHHSS
T ss_pred HHHHhhccC-CCceEEEEEEEEEEeCCccEEEEEE-EeC-----CCHHHHHHHHHH
Confidence 999999998 8999999999999999865433222 222 235666766654
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=4.1e-31 Score=284.11 Aligned_cols=198 Identities=20% Similarity=0.268 Sum_probs=164.0
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCC-CCcccCCCCeEEEEeeccccE-EEeCCCCEEEEcCCCCH
Q 035812 57 TPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYE-GLSYTSTVPFVVLDMFNLRKI-DINIADETAWVQAGATI 134 (520)
Q Consensus 57 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~~~~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~aG~~~ 134 (520)
...|.+|++|+|++||+++|++|+++++|++++|+|||+. |.+.....++|+|||++||+| ++|+++.+++||||+++
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4589999999999999999999999999999999999986 654431124899999999999 99999999999999999
Q ss_pred HHHHHHHHhcCCcceecCC---CCCCccchhhhhcCCCCCCccccCccccceeEEEEEeecccEEee---ccCCchhhhh
Q 035812 135 GELYYQISNVSKLHAFPAG---VCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILNR---ESMGEDLFWA 208 (520)
Q Consensus 135 ~~l~~~l~~~g~~~~~~~g---~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~~---~~~~~dl~~a 208 (520)
.+|+++|.++|+. ++++ ....+||||.+++||.|+. +||.++|+|+++|||++||++++. ...++|+|++
T Consensus 134 ~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~ 209 (520)
T 1wvf_A 134 GQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQI 209 (520)
T ss_dssp HHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTT
T ss_pred HHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhh
Confidence 9999999999854 4433 3337889999999998886 999999999999999999999972 2357898777
Q ss_pred hhccCC---------CCeEEEEEEEEEEEecCceEEEEEEeecccccccchHHHHHHHHHHHc
Q 035812 209 IRGGGG---------ESFGVILAWKIKLVSVPEKVTVFNVGKTTDQATSQGATDVIYKWQQVA 262 (520)
Q Consensus 209 ~rG~g~---------g~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (520)
.||+.| ++|||||+++||++|.|+....+.+.|.. .+++.+++..++++.
T Consensus 210 ~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~----~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 210 FKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFED----EADIVEIVDALRPLR 268 (520)
T ss_dssp CSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECC----GGGHHHHHHHHHHHH
T ss_pred hcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCC----HHHHHHHHHHHHHHH
Confidence 777642 59999999999999999876666666654 344555555566543
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.97 E-value=3.7e-30 Score=278.24 Aligned_cols=197 Identities=13% Similarity=0.130 Sum_probs=165.2
Q ss_pred cceEEcC-CCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCC---
Q 035812 28 SELIYTR-NNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTST--- 103 (520)
Q Consensus 28 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~--- 103 (520)
.+.|++| +++.|++.. ..|+......|.+|++|+|++||+++|++|+++++|++++|+|||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 5678999 999999742 368777777899999999999999999999999999999999999876433221
Q ss_pred CCeEEEEe-eccccEEEeC--CCCEEEEcCCCCHHHHHHHHHhcCCcceecC-CCCCCccchhhhhcCCCCCC-------
Q 035812 104 VPFVVLDM-FNLRKIDINI--ADETAWVQAGATIGELYYQISNVSKLHAFPA-GVCPTIGAGGHITGGGYGNL------- 172 (520)
Q Consensus 104 ~~gvvIdl-~~~~~i~~d~--~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~-g~~~~vgigG~~~ggg~g~~------- 172 (520)
.++++||| ++||+|++|+ +.++|+||||+++.+|+++|.++|+ .++. +..+.++|||.+.+|++|..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl--~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~ 160 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDL--GWANLPAPGVLSIGGALAVNAHGAALPAVGQT 160 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTE--ECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCC--cccccCCCCCcccCCCcccCCcccccccCCcc
Confidence 14899999 8999999998 7889999999999999999999984 4443 23355889999988777765
Q ss_pred ---ccccCccccceeEEEEEeeccc---EEeeccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEE
Q 035812 173 ---MRKYGLSSDNVVDAQLVDVEGR---ILNRESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVT 235 (520)
Q Consensus 173 ---~~~~G~~~d~v~~~~vV~~~G~---~~~~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~ 235 (520)
+.+||.++|+|++++||++||+ +++...+++||+|+++|.| + ||||++|||++|.++...
T Consensus 161 ~~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G-~--giIt~~tl~l~p~~~~~~ 226 (561)
T 2i0k_A 161 TLPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG-R--CFLTSVTMQAGPNFRQRC 226 (561)
T ss_dssp CCTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT-S--SCEEEEEEECEECCEEEE
T ss_pred cccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC-C--EEEEEEEEEEEECCceEE
Confidence 6789999999999999999999 6653334799999999665 3 899999999999987543
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=1.8e-28 Score=265.35 Aligned_cols=201 Identities=17% Similarity=0.132 Sum_probs=162.6
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCC-CCcccCCCCeEEEEe-eccccE-EEeCCCCEEEEcCCC
Q 035812 56 STPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYE-GLSYTSTVPFVVLDM-FNLRKI-DINIADETAWVQAGA 132 (520)
Q Consensus 56 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~~~~~~~~gvvIdl-~~~~~i-~~d~~~~~v~v~aG~ 132 (520)
....|.+||+|+|++||+++|++|+++++|+++||+|||+. |.+.....++|+||| ++||+| ++|+++.+|+||||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 34689999999999999999999999999999999999986 654431124899999 999999 999999999999999
Q ss_pred CHHHHHHHHHhcCCc--ceecCCCCCCccchhhhhcCCCCCCccccCccccceeEEEEEeecccEEe-ec--cCCc----
Q 035812 133 TIGELYYQISNVSKL--HAFPAGVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGRILN-RE--SMGE---- 203 (520)
Q Consensus 133 ~~~~l~~~l~~~g~~--~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~~~~-~~--~~~~---- 203 (520)
++.+|.++|.++|+. +.+.++....+||||.++++|.|+. +||..+|+|++++||++||++++ .. ..++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999865 4333444446789999999998875 99999999999999999999997 22 1221
Q ss_pred -----------hhhhhhhcc----------CCCCeEEEEEEEEEEEecCceEEEEEEeecccccccchHHHHHHHHHHHc
Q 035812 204 -----------DLFWAIRGG----------GGESFGVILAWKIKLVSVPEKVTVFNVGKTTDQATSQGATDVIYKWQQVA 262 (520)
Q Consensus 204 -----------dl~~a~rG~----------g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (520)
+++|+++++ .+|+|||||++||||+|.|+....+.+.|.. .+++.+++..++++.
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~----~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPK----DGDLKQAVDIIRPLR 300 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECS----TTHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCC----HHHHHHHHHHHHHHH
Confidence 666776643 2379999999999999999877666666654 344556666666554
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=8.1e-29 Score=262.44 Aligned_cols=189 Identities=15% Similarity=0.181 Sum_probs=154.3
Q ss_pred CCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCccc---CCCCeEEEEe
Q 035812 35 NNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYT---STVPFVVLDM 111 (520)
Q Consensus 35 ~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~---~~~~gvvIdl 111 (520)
+-+.|.+.. ..|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+.... ...++|+|||
T Consensus 11 ~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 445665432 2588888889999999999999999999999999999999999998632211 1124899999
Q ss_pred e-ccccEEEeCC--CCEEEEcCCCCHHHHHHHHHhcCCcceecC-CCCCCccchhhhhcCCCCCC----------ccccC
Q 035812 112 F-NLRKIDINIA--DETAWVQAGATIGELYYQISNVSKLHAFPA-GVCPTIGAGGHITGGGYGNL----------MRKYG 177 (520)
Q Consensus 112 ~-~~~~i~~d~~--~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~-g~~~~vgigG~~~ggg~g~~----------~~~~G 177 (520)
+ +||+|++|++ ..+|+||||+++.+|+++|.++| +.++. +.++.++|||.+.+|++|.. +++||
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G 162 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYG 162 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSS
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccc
Confidence 5 7999999985 57999999999999999999987 45552 33467899999999999986 68999
Q ss_pred ccccceeEEEEEeeccc-----EEeeccCCchhhhhhhccCCCCeEEEEEEEEEEEecCceE
Q 035812 178 LSSDNVVDAQLVDVEGR-----ILNRESMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKV 234 (520)
Q Consensus 178 ~~~d~v~~~~vV~~~G~-----~~~~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~ 234 (520)
+++|+|++++||++||+ +++.+.+++||| ++|+|. |+ ||||++|||++|.++..
T Consensus 163 ~~~D~V~~levV~adG~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 163 SISNLVLSLTAVVYDKASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp CGGGGEEEEEEEEEETTTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred cHHHhEEEEEEEcCCCCCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 99999999999999998 666334689985 555555 45 59999999999998643
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=5.8e-29 Score=267.44 Aligned_cols=235 Identities=17% Similarity=0.193 Sum_probs=177.2
Q ss_pred CcccccchhHHHHhhccCCCCCCCCCcceEEcCCCCchHHHHHhhhcCcccCCCCCCCccEEEecCCHHHHHHHHHHHHH
Q 035812 2 CSIQDSNLELFLKCLLHDHVEPSNPISELIYTRNNSSFQSVLNAYIKNRRFLTPSTPKPLAIVTPNHRSHVQATIKCSNQ 81 (520)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~ 81 (520)
||.+....+.+.+.|...+. .+.|++.... +..|. ..|+ .....|.+||+|+|++||+++|++|++
T Consensus 2 ~~~~~~~~~~~~~~L~~~~g------~~~v~~~~~~-----~~~y~--~d~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~~ 67 (571)
T 1f0x_A 2 SSMTTTDNKAFLNELARLVG------SSHLLTDPAK-----TARYR--KGFR-SGQGDALAVVFPGSLLELWRVLKACVT 67 (571)
T ss_dssp -------CHHHHHHHHHHHC------GGGEECCHHH-----HHHHH--BCSS-SCBBCCSEEECCSSHHHHHHHHHHHHH
T ss_pred CCcCCcchHHHHHHHHHhcC------CCeEEcCHHH-----HHHHh--cccc-ccCCCccEEEeeCCHHHHHHHHHHHHH
Confidence 34445555667777777743 2457764211 11122 2343 234689999999999999999999999
Q ss_pred CCCeEEEEeCccCCCCCcccCCC----CeEEEEeeccccE-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecC---C
Q 035812 82 AGLELRIRSGGHDYEGLSYTSTV----PFVVLDMFNLRKI-DINIADETAWVQAGATIGELYYQISNVSKLHAFPA---G 153 (520)
Q Consensus 82 ~~~~~~~~ggGh~~~g~~~~~~~----~gvvIdl~~~~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~---g 153 (520)
+++||.++||||++.|.+..... ++|+|||++||+| ++|+ .++|+||||+++.+|.++|.++|+ .++. +
T Consensus 68 ~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aGv~l~~L~~~l~~~Gl--~~p~~~g~ 144 (571)
T 1f0x_A 68 ADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPGTTLYSLEKALKPLGR--EPHSVIGS 144 (571)
T ss_dssp TTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTTCBHHHHHHHHGGGTE--ECSCCCGG
T ss_pred cCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCCcCHHHHHHHHHhcCc--cCCcCCCc
Confidence 99999999999999987765431 3899999999999 7984 579999999999999999999974 3322 3
Q ss_pred CCCCccchhhhhcCCCCCCccccCcccc----------------ceeEEEEEeecccEEe-ec---------------cC
Q 035812 154 VCPTIGAGGHITGGGYGNLMRKYGLSSD----------------NVVDAQLVDVEGRILN-RE---------------SM 201 (520)
Q Consensus 154 ~~~~vgigG~~~ggg~g~~~~~~G~~~d----------------~v~~~~vV~~~G~~~~-~~---------------~~ 201 (520)
+|..++|||.+.+++.|..+.+||..+| +|++++||++||++++ .. .+
T Consensus 145 s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~ 224 (571)
T 1f0x_A 145 SCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAH 224 (571)
T ss_dssp GGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSS
T ss_pred cCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccc
Confidence 4556789999999999999999999999 9999999999999985 21 12
Q ss_pred --Cc-----------------hhhhhh--hccCCCCeEEEEEEEEEEEecCceEEEEEEeecccccccchHHHHHHHHH
Q 035812 202 --GE-----------------DLFWAI--RGGGGESFGVILAWKIKLVSVPEKVTVFNVGKTTDQATSQGATDVIYKWQ 259 (520)
Q Consensus 202 --~~-----------------dl~~a~--rG~g~g~fGivt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (520)
++ ||+|++ +|+. |+||| |+++||++|.|+....+.+.++. .+++.+++..+.
T Consensus 225 ~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~~~~~~~~~~----~~~a~~~~~~~~ 297 (571)
T 1f0x_A 225 DYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQQVFYIGTNQ----PEVLTEIRRHIL 297 (571)
T ss_dssp CTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSCEEEEEEESC----HHHHHHHHHHHH
T ss_pred cCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeEEEEEEEeCC----HHHHHHHHHHHH
Confidence 23 988888 9988 89999 99999999999876666565543 333444554444
No 23
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=1.6e-25 Score=226.84 Aligned_cols=165 Identities=15% Similarity=0.035 Sum_probs=146.2
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeEEEEeeccccEEEeC--CCCEEEEcCCCC
Q 035812 56 STPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKIDINI--ADETAWVQAGAT 133 (520)
Q Consensus 56 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i~~d~--~~~~v~v~aG~~ 133 (520)
....|.+++.|+|++||+++|++|+++++|+.++|+|||+.+.+. .+ |+||+++ |++|+++. +..+++|+||++
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~ 102 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGED 102 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCCc
Confidence 345788999999999999999999999999999999999886654 44 8999998 99998753 456899999999
Q ss_pred HHHHHHHHHhcCCcceecCCCCCCccchhhhhcCCCCCCccccCc-cccceeEEEEEee-cccEEeeccCCchhhhhhhc
Q 035812 134 IGELYYQISNVSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYGL-SSDNVVDAQLVDV-EGRILNRESMGEDLFWAIRG 211 (520)
Q Consensus 134 ~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~~~~~~~~~~dl~~a~rG 211 (520)
|.+|.+++.++| ..|.++.+||+| ++||+.+++.+.||. ++|+|+++++|++ +|++++.. +.||+|+||+
T Consensus 103 ~~~l~~~a~~~G-----l~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~ 174 (357)
T 3i99_A 103 WPSLVSWCVEQG-----IGGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRD 174 (357)
T ss_dssp HHHHHHHHHHTT-----CTTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTB
T ss_pred HHHHHHHHHHcC-----CcCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccccc
Confidence 999999999998 358889999998 889999999999997 8999999999999 99999743 3699999998
Q ss_pred cCC----CCeEEEEEEEEEEEecCc
Q 035812 212 GGG----ESFGVILAWKIKLVSVPE 232 (520)
Q Consensus 212 ~g~----g~fGivt~~~~~~~p~~~ 232 (520)
+.. +++||||+++|||+|.+.
T Consensus 175 s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 175 SIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCCccCCCEEEEEEEEEEEeCCc
Confidence 753 379999999999999764
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.92 E-value=2.1e-25 Score=223.68 Aligned_cols=164 Identities=19% Similarity=0.138 Sum_probs=132.4
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeEEEEeeccccEEEeCCCCEEEEcCCCCHH
Q 035812 56 STPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKIDINIADETAWVQAGATIG 135 (520)
Q Consensus 56 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~ 135 (520)
....|.+++.|+|++||+++|++|+++++|+.++|+|||+.+.+.+.+ +++|||++|++|++| ..+++|+||++|.
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~--gvvI~l~~~~~I~~d--~~~v~v~aG~~~~ 126 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR--GVILHLDLLQTIERN--NTQIVAMSGAKLI 126 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHH
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC--eEEEECCCCCcEEEC--CCEEEEecCcCHH
Confidence 345899999999999999999999999999999999999886554333 899999999999886 3599999999999
Q ss_pred HHHHHHHhcCC-cceecCCCCCCccchhhhhcCCCCCCcccc-CccccceeEEEEEeecccEEeeccCCchhhhhhhccC
Q 035812 136 ELYYQISNVSK-LHAFPAGVCPTIGAGGHITGGGYGNLMRKY-GLSSDNVVDAQLVDVEGRILNRESMGEDLFWAIRGGG 213 (520)
Q Consensus 136 ~l~~~l~~~g~-~~~~~~g~~~~vgigG~~~ggg~g~~~~~~-G~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rG~g 213 (520)
+|++++.++|+ ++.++.|.+.+ |||.+..++.| | |.++|+|+++++|++||++++.. .+|++|++|++.
T Consensus 127 ~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s~ 197 (322)
T 3tx1_A 127 DTAKFALNESLSGLEFACGIPGS--IGGALHMNAGA-----YGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRFST 197 (322)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-CT
T ss_pred HHHHHHHHcCCcccccCCCCcch--hHHHHHhCccC-----cccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhcc
Confidence 99999999984 23345555443 55655533322 4 79999999999999999999733 379999999875
Q ss_pred CC-CeEEEEEEEEEEEecCc
Q 035812 214 GE-SFGVILAWKIKLVSVPE 232 (520)
Q Consensus 214 ~g-~fGivt~~~~~~~p~~~ 232 (520)
.+ ++||||+++||++|.|+
T Consensus 198 ~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 198 IAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTGGGCEEEEEEEECEECCH
T ss_pred cCCCCEEEEEEEEEEEeCCH
Confidence 33 67999999999999874
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=6.6e-25 Score=221.46 Aligned_cols=160 Identities=18% Similarity=0.201 Sum_probs=132.2
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeEEEEeeccccEEEeCCCCEEEEcCCCCHH
Q 035812 56 STPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKIDINIADETAWVQAGATIG 135 (520)
Q Consensus 56 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~ 135 (520)
....|.+|++|+|++||+++|++|+++++|++++|||||+.+.+.+.+ +++|||++||+|++|. .+++||||++|.
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id~--~~v~v~aGv~~~ 120 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVSD--DAIIAGSGAAII 120 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEcC--CEEEEeCCCcHH
Confidence 345799999999999999999999999999999999999886655443 8999999999999873 699999999999
Q ss_pred HHHHHHHhcCC-cceecCCCCCCccchhhhhcCCCCCCccccC-ccccceeEEEEEeecccEEeeccCCchhhhhhhccC
Q 035812 136 ELYYQISNVSK-LHAFPAGVCPTIGAGGHITGGGYGNLMRKYG-LSSDNVVDAQLVDVEGRILNRESMGEDLFWAIRGGG 213 (520)
Q Consensus 136 ~l~~~l~~~g~-~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rG~g 213 (520)
+|++++.++|+ ++...++... +|||.+..++.| || .++|+|++++||++||++++... .|++|++|+..
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~ 191 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSI 191 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCH
T ss_pred HHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccccc
Confidence 99999999874 2222333222 477777665544 88 99999999999999999997332 48899999742
Q ss_pred ---CCCeEEEEEEEEEEEec
Q 035812 214 ---GESFGVILAWKIKLVSV 230 (520)
Q Consensus 214 ---~g~fGivt~~~~~~~p~ 230 (520)
.| ||||+++||++|.
T Consensus 192 l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 192 IQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHHTT--CEEEEEEEECEEC
T ss_pred cCCCC--EEEEEEEEEEEcC
Confidence 13 9999999999998
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=6.5e-24 Score=214.43 Aligned_cols=164 Identities=15% Similarity=0.076 Sum_probs=143.8
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeEEEEeeccccEE-EeCCC-CEEEEcCCCCH
Q 035812 57 TPKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKID-INIAD-ETAWVQAGATI 134 (520)
Q Consensus 57 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i~-~d~~~-~~v~v~aG~~~ 134 (520)
...|.+++.|+|++||+++|++|+++++|+.++|||||+.+.+. .+ |+||+|+ |+++. ++.++ .+++|+||++|
T Consensus 12 gg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~ 87 (340)
T 1uxy_A 12 DHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGENW 87 (340)
T ss_dssp CCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCCH
Confidence 44799999999999999999999999999999999999887654 33 8999997 99985 56666 68999999999
Q ss_pred HHHHHHHHhcCCcceecCCCCCCccchhhhhcCCCCCCccccCc-cccceeEEEEEee-cccEEeeccCCchhhhhhhcc
Q 035812 135 GELYYQISNVSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYGL-SSDNVVDAQLVDV-EGRILNRESMGEDLFWAIRGG 212 (520)
Q Consensus 135 ~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~~~~~~~~~~dl~~a~rG~ 212 (520)
.+|.+++.++|+ .|.+..+||+| ++||+..++.+.||. ++|+|+++++|++ +|++++.. +.||+|++|++
T Consensus 88 ~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~s 159 (340)
T 1uxy_A 88 HRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRDS 159 (340)
T ss_dssp HHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTBC
T ss_pred HHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCcC
Confidence 999999999872 67888899998 899999999999995 8999999999996 99999733 37999999987
Q ss_pred CC----CCeEEEEEEEEEEEecCc
Q 035812 213 GG----ESFGVILAWKIKLVSVPE 232 (520)
Q Consensus 213 g~----g~fGivt~~~~~~~p~~~ 232 (520)
.. +++||||+++||+.|.+.
T Consensus 160 ~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 160 IFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp GGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCcCCCCEEEEEEEEEEEcCCC
Confidence 42 369999999999999764
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.88 E-value=7.2e-23 Score=199.77 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=131.1
Q ss_pred CCccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeEEEEeeccccEEEeCCCCEEEEcCCCCHHHH
Q 035812 58 PKPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRKIDINIADETAWVQAGATIGEL 137 (520)
Q Consensus 58 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~aG~~~~~l 137 (520)
..|. +++|+|++||+++| ++|+.++|+|||+.+.+.+.+ +|+||+|++|++|++| . +|+||++|.+|
T Consensus 21 g~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd--~---~v~aG~~~~~l 87 (268)
T 2gqt_A 21 GPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLK--G---WVGAGTLLPLL 87 (268)
T ss_dssp CEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTT--S---EEETTSBHHHH
T ss_pred cceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEc--C---EEECCCCHHHH
Confidence 3466 99999999999999 899999999999887665432 4899999999999875 2 99999999999
Q ss_pred HHHHHhcCCcceecCCCCCCccchhhhhcCCCCCCccccC-ccccceeEEEEEeecccEEeeccCCchhhhhhhccCCCC
Q 035812 138 YYQISNVSKLHAFPAGVCPTIGAGGHITGGGYGNLMRKYG-LSSDNVVDAQLVDVEGRILNRESMGEDLFWAIRGGGGES 216 (520)
Q Consensus 138 ~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~~~~~~~~~~dl~~a~rG~g~g~ 216 (520)
.+++.++| + .|.++.+||+| ++||++.++.+.|| .++|+|+++++| ++|++++.. +.||+|+||++....
T Consensus 88 ~~~~~~~G--l---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~~~ 158 (268)
T 2gqt_A 88 VQEAARAG--L---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHLPP 158 (268)
T ss_dssp HHHHHHTT--E---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCCST
T ss_pred HHHHHHcC--C---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCcCC
Confidence 99999987 3 47888999998 89999999999999 689999999999 999999743 369999999876211
Q ss_pred eEEEEEEEEEEEecC
Q 035812 217 FGVILAWKIKLVSVP 231 (520)
Q Consensus 217 fGivt~~~~~~~p~~ 231 (520)
-||||+++||++|.+
T Consensus 159 ~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 159 GGIVTRVRLKLKERP 173 (268)
T ss_dssp TCEEEEEEECCEECC
T ss_pred CceEEEEEEEEEeCC
Confidence 149999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.80 E-value=1.2e-19 Score=171.91 Aligned_cols=115 Identities=17% Similarity=0.228 Sum_probs=98.5
Q ss_pred EEEeCCCCEEEEcCCCCHHHHHHHHHhcCCcceecC--CCCCCccchhhhhcCCCCCCccccCccccceeEEEEEeeccc
Q 035812 117 IDINIADETAWVQAGATIGELYYQISNVSKLHAFPA--GVCPTIGAGGHITGGGYGNLMRKYGLSSDNVVDAQLVDVEGR 194 (520)
Q Consensus 117 i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~--g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~ 194 (520)
+++|+++.+|+||||+++.+|+++|.++| +.++. |+++. +|||++.+|++| ++||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~G--l~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTG--LFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTT--EECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcC--CEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 46889999999999999999999999987 44444 55555 999999999999 899999 99999999999999
Q ss_pred EEe-ec-----cCCchhhhhhhccCCCCeEEEEEEEEEEEecCceEEEEEE
Q 035812 195 ILN-RE-----SMGEDLFWAIRGGGGESFGVILAWKIKLVSVPEKVTVFNV 239 (520)
Q Consensus 195 ~~~-~~-----~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~~~~~~~~~~ 239 (520)
+++ +. ..++||||+++|++ |+|||||+++||++|.|+....+.+
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~ 123 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRP 123 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEE
T ss_pred EEEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEE
Confidence 996 22 24589999999987 8999999999999999876554433
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.06 E-value=9.3e-06 Score=79.88 Aligned_cols=155 Identities=19% Similarity=0.174 Sum_probs=99.7
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCC-cccCCCCeEEEEee---ccccEEEeCCCCEEEEcCCCCH
Q 035812 59 KPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGL-SYTSTVPFVVLDMF---NLRKIDINIADETAWVQAGATI 134 (520)
Q Consensus 59 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~gvvIdl~---~~~~i~~d~~~~~v~v~aG~~~ 134 (520)
.|--.++|+|.+|+.++++. ++.+..+.|||++.... .......+++||++ .|+.|+.+ +..+++|+|+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 45568999999999998875 33679999999996432 01101137999998 47788764 346999999999
Q ss_pred HHHHHH-HHhcCC-ccee----cCCC--CCCccchhhhhcCCCCCCccccCcccccee-------EEEEEeecccEEeec
Q 035812 135 GELYYQ-ISNVSK-LHAF----PAGV--CPTIGAGGHITGGGYGNLMRKYGLSSDNVV-------DAQLVDVEGRILNRE 199 (520)
Q Consensus 135 ~~l~~~-l~~~g~-~~~~----~~g~--~~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~~~~~~ 199 (520)
.++.+. +.+++. .+.. ..|. -...+|||.+..+.. ..|.+. .+++..++|+ .+-.
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~-r~i~ 148 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR-RTVP 148 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-EEEE
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-EEEE
Confidence 999962 333322 1110 1111 113568998887632 345443 6888889993 3322
Q ss_pred cCCchhhhhhhccCCCCeEEEEEEEEEEEec
Q 035812 200 SMGEDLFWAIRGGGGESFGVILAWKIKLVSV 230 (520)
Q Consensus 200 ~~~~dl~~a~rG~g~g~fGivt~~~~~~~p~ 230 (520)
-.|+|..+|-..-..=.|||+++|.+.+.
T Consensus 149 --~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 149 --ADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp --STTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred --HHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 25888887632111225999999877653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.44 E-value=0.00029 Score=69.24 Aligned_cols=154 Identities=16% Similarity=0.099 Sum_probs=93.9
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCC-cccCCCCeEEEEeec---cccEEEeCCCCEEEEcCCCCH
Q 035812 59 KPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGL-SYTSTVPFVVLDMFN---LRKIDINIADETAWVQAGATI 134 (520)
Q Consensus 59 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~gvvIdl~~---~~~i~~d~~~~~v~v~aG~~~ 134 (520)
.|--.++|+|.+|+.++++. ++-+..+.+|||+.... ........++||+++ |+.|+.+ ++.++||+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREE--GTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 45568999999999998863 24568999999995421 111111368999976 5677664 457999999999
Q ss_pred HHHHH--HHHhcCCccee--c-CCCC---CCccchhhhhcCCCCCCccccCcccccee-------EEEEEeecccEEeec
Q 035812 135 GELYY--QISNVSKLHAF--P-AGVC---PTIGAGGHITGGGYGNLMRKYGLSSDNVV-------DAQLVDVEGRILNRE 199 (520)
Q Consensus 135 ~~l~~--~l~~~g~~~~~--~-~g~~---~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~~~~~~ 199 (520)
.++.+ .+.++-..+.- . .++. ...+|||.+..+. ...|.+. .+++..++|+....-
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r~v~~ 149 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGARIVAA 149 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEEEEEH
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccEEEEH
Confidence 99994 44432101110 0 1111 1246899888762 2455543 667777888432221
Q ss_pred cCCchhhhhhhccCCCCeEEEEEEEEEEEe
Q 035812 200 SMGEDLFWAIRGGGGESFGVILAWKIKLVS 229 (520)
Q Consensus 200 ~~~~dl~~a~rG~g~g~fGivt~~~~~~~p 229 (520)
.|+|..++-..-..=-|||++.|...+
T Consensus 150 ---~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 150 ---RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp ---HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred ---HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 477765541110122589999886554
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.85 E-value=0.0011 Score=69.30 Aligned_cols=150 Identities=17% Similarity=0.084 Sum_probs=97.0
Q ss_pred EEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCC--cccCCCCeEEEEeec---cccEEEeCCCCEEEEcCCCCHHHH
Q 035812 63 IVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGL--SYTSTVPFVVLDMFN---LRKIDINIADETAWVQAGATIGEL 137 (520)
Q Consensus 63 vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~--~~~~~~~gvvIdl~~---~~~i~~d~~~~~v~v~aG~~~~~l 137 (520)
.++|+|.+|+.++++.. . +..+.+||++.... .... ...++||+++ |+.|+.+ +..++||||+++.++
T Consensus 180 y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~-~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~l 252 (462)
T 2w3s_A 180 AFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALR-DLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAAL 252 (462)
T ss_dssp CBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCC-CCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHHH
T ss_pred EEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCC-CCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHHH
Confidence 57899999999888642 2 57889999997642 1111 1368899987 6788775 346999999999999
Q ss_pred HHHHHhcCCc-c----eecCCC--CCCccchhhhhcCCCCCCccccCcccccee----EEEEEeecccEEeeccCCchhh
Q 035812 138 YYQISNVSKL-H----AFPAGV--CPTIGAGGHITGGGYGNLMRKYGLSSDNVV----DAQLVDVEGRILNRESMGEDLF 206 (520)
Q Consensus 138 ~~~l~~~g~~-~----~~~~g~--~~~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G~~~~~~~~~~dl~ 206 (520)
.+.+.+ ... + ....|. -...+|||.+..+.+ .+....-++ .+++..++|+ .+.. -.|+|
T Consensus 253 ~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~dF~ 322 (462)
T 2w3s_A 253 RAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RRMP--LEDFF 322 (462)
T ss_dssp HHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CCCB--GGGGE
T ss_pred HHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EEEE--HHHhh
Confidence 988433 221 1 001111 123568999988763 355566666 7888888884 2211 25788
Q ss_pred hhhhccCCCCeEEEEEEEEEEEe
Q 035812 207 WAIRGGGGESFGVILAWKIKLVS 229 (520)
Q Consensus 207 ~a~rG~g~g~fGivt~~~~~~~p 229 (520)
..+|-..-..=.||+++.|...+
T Consensus 323 ~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 323 LEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EETTEESCCTTCEEEEEEEESCC
T ss_pred cccccccCCCCcEEEEEEEecCC
Confidence 77652110112599999886544
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.05 E-value=0.0095 Score=58.79 Aligned_cols=156 Identities=11% Similarity=0.017 Sum_probs=89.8
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcc-cCCCCeEEEEeec---cccEEEeCCCCEEEEcCCCCH
Q 035812 59 KPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSY-TSTVPFVVLDMFN---LRKIDINIADETAWVQAGATI 134 (520)
Q Consensus 59 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~-~~~~~gvvIdl~~---~~~i~~d~~~~~v~v~aG~~~ 134 (520)
.+...++|+|.+|..++++. +. ...+.+||++....-. .......+||+++ |+.|+.+ ++.++|||++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEEC--CCeEEEccCCcH
Confidence 45568999999999887643 22 3688899999642210 0111268899986 5666653 568999999999
Q ss_pred HHHHHHHHhc----C------C-cce--e--cCC--CCCCccchhhhhcCCCCCCccccCcccccee----EEEEEeecc
Q 035812 135 GELYYQISNV----S------K-LHA--F--PAG--VCPTIGAGGHITGGGYGNLMRKYGLSSDNVV----DAQLVDVEG 193 (520)
Q Consensus 135 ~~l~~~l~~~----g------~-~~~--~--~~g--~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G 193 (520)
.++.+.+.+. . . .+. + ..+ .-...+|||.+..+-. .+-..--++ .+++..++|
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~l~~~~G 156 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLTIVSRGT 156 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEEEEETTE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEEEEcCCC
Confidence 9999876531 0 0 000 0 111 1124578998887643 122222222 567777788
Q ss_pred cEEeeccCCchhhhhhhccCCCCeEEEEEEEEEEE
Q 035812 194 RILNRESMGEDLFWAIRGGGGESFGVILAWKIKLV 228 (520)
Q Consensus 194 ~~~~~~~~~~dl~~a~rG~g~g~fGivt~~~~~~~ 228 (520)
+....- ..|+|-+++--.-..=-|||++.|...
T Consensus 157 ~R~vp~--~~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 157 RRTVPM--DHTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp EEEEEC--CGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred cEEEEe--ehHhhcCcccccCCCCcEEEEEEecCC
Confidence 533211 126665443111011149999887543
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=93.11 E-value=0.11 Score=50.51 Aligned_cols=151 Identities=15% Similarity=0.108 Sum_probs=89.2
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCc-ccCCCCeEEEEeec---cccEEEeCCCCEEEEcCCCCH
Q 035812 59 KPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLS-YTSTVPFVVLDMFN---LRKIDINIADETAWVQAGATI 134 (520)
Q Consensus 59 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~-~~~~~~gvvIdl~~---~~~i~~d~~~~~v~v~aG~~~ 134 (520)
.|--.++|+|.+|+.++++- +-...+.+||++....- ........+||+++ |+.|+.+ ++.++||+++++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt~ 77 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQS--AGILSVGAMVTH 77 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEE--TTEEEEETTCBH
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEc--CCEEEEcCCCcH
Confidence 45568899999999988753 33477889999943211 00111258899987 5666654 457999999999
Q ss_pred HHHHH--HHHhcCCcce--ec-CC---CCCCccchhhhhcCCCCCCccccCcccccee-------EEEEEeecccEEeec
Q 035812 135 GELYY--QISNVSKLHA--FP-AG---VCPTIGAGGHITGGGYGNLMRKYGLSSDNVV-------DAQLVDVEGRILNRE 199 (520)
Q Consensus 135 ~~l~~--~l~~~g~~~~--~~-~g---~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~~~~~~ 199 (520)
.++.+ .+.++-..+. +. .| .-+..+|||.+..+- ...|... .+++..++|+....-
T Consensus 78 ~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~vp~ 148 (288)
T 1t3q_C 78 FRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSVSA 148 (288)
T ss_dssp HHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEEEH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEEEH
Confidence 99986 3433211110 00 11 113346899887552 1356654 677777788533211
Q ss_pred cCCchhhhhhhccCCCCeEEEEEEEEEE
Q 035812 200 SMGEDLFWAIRGGGGESFGVILAWKIKL 227 (520)
Q Consensus 200 ~~~~dl~~a~rG~g~g~fGivt~~~~~~ 227 (520)
.|+|...+--.-..=-|||++.|..
T Consensus 149 ---~dF~~g~~~t~L~~~Eil~~I~iP~ 173 (288)
T 1t3q_C 149 ---TDFMKGHYFTDLEAGEVLVRVEIPI 173 (288)
T ss_dssp ---HHHEEETTEESCCTTCEEEEEEEEC
T ss_pred ---HHHhcCcccccCCCCCEEEEEEecC
Confidence 3665543210001125888888754
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=91.71 E-value=0.19 Score=49.08 Aligned_cols=75 Identities=20% Similarity=0.188 Sum_probs=52.3
Q ss_pred ccEEEecCCHHHHHHHHHHHHHCCC-eEEEEeCccCCCCCc-ccCCCCeEEEEeecc---ccEEEeCCCCEEEEcCCCCH
Q 035812 60 PLAIVTPNHRSHVQATIKCSNQAGL-ELRIRSGGHDYEGLS-YTSTVPFVVLDMFNL---RKIDINIADETAWVQAGATI 134 (520)
Q Consensus 60 p~~vv~p~~~~dv~~~v~~a~~~~~-~~~~~ggGh~~~g~~-~~~~~~gvvIdl~~~---~~i~~d~~~~~v~v~aG~~~ 134 (520)
|--.++|+|.+|..++++ +++- ...+.+||++....- ........+||++++ +.|+. +++.++|||++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcH
Confidence 445789999999877664 4433 478889999964211 111113688999875 55555 4568999999999
Q ss_pred HHHHH
Q 035812 135 GELYY 139 (520)
Q Consensus 135 ~~l~~ 139 (520)
.++.+
T Consensus 78 ~~l~~ 82 (296)
T 3hrd_C 78 TQIEN 82 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=85.99 E-value=1.1 Score=44.15 Aligned_cols=76 Identities=14% Similarity=0.122 Sum_probs=53.2
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCC-cccCCCCeEEEEeecc---ccEEEeCCCCEEEEcCCCCH
Q 035812 59 KPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGL-SYTSTVPFVVLDMFNL---RKIDINIADETAWVQAGATI 134 (520)
Q Consensus 59 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~gvvIdl~~~---~~i~~d~~~~~v~v~aG~~~ 134 (520)
.|--.++|+|.+|..++++ + -.-.+.+||+++... -........+||++++ +.|+.++ ++.++||+++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCcH
Confidence 4556889999999988875 2 247888999996321 0001112688999876 6666543 346999999999
Q ss_pred HHHHHH
Q 035812 135 GELYYQ 140 (520)
Q Consensus 135 ~~l~~~ 140 (520)
.++.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 999864
No 36
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=80.31 E-value=2.2 Score=44.93 Aligned_cols=31 Identities=26% Similarity=0.197 Sum_probs=23.5
Q ss_pred hhhcccccc-HHHHHHHHhhcCCCCCCCCCCC
Q 035812 482 YGAKYFKGN-YKRLVEVKTKVDPFNFFKNEQS 512 (520)
Q Consensus 482 ~~~~y~g~n-~~RL~~iK~kYDP~nvF~~~qs 512 (520)
|...+||++ ++-+++||+.+||+|+|+-..-
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki 512 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGRS 512 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGG
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcC
Confidence 336777876 4555999999999999975443
No 37
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=70.35 E-value=1.6 Score=47.48 Aligned_cols=28 Identities=32% Similarity=0.407 Sum_probs=23.1
Q ss_pred hhhcccc-ccHHHHHHHHhhcCCCCCCCC
Q 035812 482 YGAKYFK-GNYKRLVEVKTKVDPFNFFKN 509 (520)
Q Consensus 482 ~~~~y~g-~n~~RL~~iK~kYDP~nvF~~ 509 (520)
|-..++| ..++.|++||+.+||+|+|+-
T Consensus 626 ~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 626 WLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 5555666 479999999999999999963
No 38
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=66.37 E-value=4.4 Score=47.63 Aligned_cols=78 Identities=6% Similarity=-0.011 Sum_probs=53.5
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcc-cCCCCeEEEEeec---cccEEEeCCCCEEEEcCCCCH
Q 035812 59 KPLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSY-TSTVPFVVLDMFN---LRKIDINIADETAWVQAGATI 134 (520)
Q Consensus 59 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~-~~~~~gvvIdl~~---~~~i~~d~~~~~v~v~aG~~~ 134 (520)
.+...++|+|.+|+.++++- + -.-.+.+||++..-.-. .......+||+++ |+.|+.+ ...++|||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 34568999999999887643 2 23477899988542110 0111257899987 5566654 457999999999
Q ss_pred HHHHHHHH
Q 035812 135 GELYYQIS 142 (520)
Q Consensus 135 ~~l~~~l~ 142 (520)
.+|.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 39
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=62.77 E-value=4.7 Score=42.93 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=26.2
Q ss_pred cccHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q 035812 488 KGNYKRLVEVKTKVDPFNFFKNEQSIPPGLVNF 520 (520)
Q Consensus 488 g~n~~RL~~iK~kYDP~nvF~~~qsI~p~~~~~ 520 (520)
++... |++||+.+||+|+|+-..-+.|..+|+
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~~~~~~ 567 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTSKRKNW 567 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCCCSSCC
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCCccccc
Confidence 33444 999999999999999888888887764
No 40
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=50.85 E-value=7 Score=41.53 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=20.6
Q ss_pred ccHHHHHHHHhhcCCCCCCCCC
Q 035812 489 GNYKRLVEVKTKVDPFNFFKNE 510 (520)
Q Consensus 489 ~n~~RL~~iK~kYDP~nvF~~~ 510 (520)
.++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999875
No 41
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=49.40 E-value=17 Score=38.41 Aligned_cols=23 Identities=17% Similarity=0.140 Sum_probs=19.3
Q ss_pred ccHHHHHHHHhhcCCCCCCCCCC
Q 035812 489 GNYKRLVEVKTKVDPFNFFKNEQ 511 (520)
Q Consensus 489 ~n~~RL~~iK~kYDP~nvF~~~q 511 (520)
..++-+++||+.+||+|+|+-..
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk 545 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGK 545 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTG
T ss_pred HHHHHHHHHHHHcCccCCCCCCc
Confidence 46888999999999999997443
No 42
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=47.93 E-value=18 Score=29.87 Aligned_cols=42 Identities=21% Similarity=0.314 Sum_probs=34.6
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCccC
Q 035812 51 RFLTPSTPKPLAIVTPNHRSHVQATIKCSNQAGLEL-RIRSGGHD 94 (520)
Q Consensus 51 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh~ 94 (520)
+|.. ...|..|+++.+++++.++.+-|.+.|+|. .++=.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4543 358999999999999999999999999996 56667763
No 43
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=45.46 E-value=8 Score=40.21 Aligned_cols=28 Identities=29% Similarity=0.596 Sum_probs=22.9
Q ss_pred hhhccccccHHHHHHHHhhcCCCCCCCCCC
Q 035812 482 YGAKYFKGNYKRLVEVKTKVDPFNFFKNEQ 511 (520)
Q Consensus 482 ~~~~y~g~n~~RL~~iK~kYDP~nvF~~~q 511 (520)
+...| .++++.++||+++||+++|.+..
T Consensus 447 ~~~~Y--P~~~~F~~lr~~~DP~g~F~n~~ 474 (481)
T 4feh_A 447 FHAMY--PRVDEWISVRRKVDPLRVFASDM 474 (481)
T ss_dssp HHHHC--TTHHHHHHHHHHHCTTCCBCCHH
T ss_pred HHHhC--cCHHHHHHHHHhhCCccccCCHH
Confidence 44444 68999999999999999998753
No 44
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=39.93 E-value=10 Score=39.42 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=23.0
Q ss_pred hhhcccc-ccHHHHHHHHhhcCCCCCCC
Q 035812 482 YGAKYFK-GNYKRLVEVKTKVDPFNFFK 508 (520)
Q Consensus 482 ~~~~y~g-~n~~RL~~iK~kYDP~nvF~ 508 (520)
|-..++| ..++-+++||+.+||+|+++
T Consensus 444 ~l~~~~~~~~~~~m~~iK~~~DP~~ilN 471 (476)
T 3pm9_A 444 ELAEVKDKTAIELMRSIKALLDPHGIMN 471 (476)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHCTTSCBS
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 6566666 57999999999999999986
No 45
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=36.79 E-value=16 Score=38.57 Aligned_cols=23 Identities=17% Similarity=0.426 Sum_probs=21.1
Q ss_pred cccHHHHHHHHhhcCCCCCCCCC
Q 035812 488 KGNYKRLVEVKTKVDPFNFFKNE 510 (520)
Q Consensus 488 g~n~~RL~~iK~kYDP~nvF~~~ 510 (520)
|+|++.-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 46
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=36.06 E-value=55 Score=26.92 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=32.8
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCccC
Q 035812 57 TPKPLAIVTPNHRSHVQATIKCSNQAGLEL-RIRSGGHD 94 (520)
Q Consensus 57 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh~ 94 (520)
...|..|+++.+++++.++.+-|.+.|+|. .++-.|+.
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 358999999999999999999999999997 56667763
No 47
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=35.56 E-value=42 Score=27.75 Aligned_cols=37 Identities=8% Similarity=0.108 Sum_probs=32.3
Q ss_pred CCccEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCccC
Q 035812 58 PKPLAIVTPNHRSHVQATIKCSNQAGLEL-RIRSGGHD 94 (520)
Q Consensus 58 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh~ 94 (520)
..+..|+++.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 47999999999999999999999999996 56667764
No 48
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=33.32 E-value=57 Score=26.53 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=31.0
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCccC
Q 035812 57 TPKPLAIVTPNHRSHVQATIKCSNQAGLEL-RIRSGGHD 94 (520)
Q Consensus 57 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh~ 94 (520)
...|..|+++.+++++.++.+-|.+.|+|. .++-.|+.
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 458999999999999999999999999986 45555553
No 49
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=32.45 E-value=23 Score=41.63 Aligned_cols=77 Identities=5% Similarity=0.025 Sum_probs=48.0
Q ss_pred EEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCC--CCcccCCCCeEEEEeeccccE-EEeCCCCEEEEcCCCCHHHHH
Q 035812 62 AIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYE--GLSYTSTVPFVVLDMFNLRKI-DINIADETAWVQAGATIGELY 138 (520)
Q Consensus 62 ~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~--g~~~~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~aG~~~~~l~ 138 (520)
..++|.|.+|+.++..- .-+-+ +..|++... -..... .-.++|++.+.... .+..++..++|||++++.++.
T Consensus 242 ~w~~P~tl~el~~l~~~--~p~a~--lvaGnT~~gl~~~~~~~-~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMK--HPSAP--LVIGNTYLGLHMKFTDV-SYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp EEEECSSHHHHHHHHHH--CTTSC--BCSSCTTHHHHHC--CC-CCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred eEecCCCHHHHHHHHHH--CCCCe--EEEecccceeeEeecCC-CCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 46899999999887542 12333 445665532 111101 12588998764443 344455689999999999998
Q ss_pred HHHHh
Q 035812 139 YQISN 143 (520)
Q Consensus 139 ~~l~~ 143 (520)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 50
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=32.42 E-value=62 Score=26.40 Aligned_cols=38 Identities=11% Similarity=0.162 Sum_probs=32.5
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCccC
Q 035812 57 TPKPLAIVTPNHRSHVQATIKCSNQAGLEL-RIRSGGHD 94 (520)
Q Consensus 57 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh~ 94 (520)
...|..|+++.+++++.++.+-|.+.|+|. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 458999999999999999999999999996 55566654
No 51
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=28.70 E-value=92 Score=25.32 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=31.2
Q ss_pred CCccEEEecCCHHHHHHHHHHHHHCCCeE-EEEeCcc
Q 035812 58 PKPLAIVTPNHRSHVQATIKCSNQAGLEL-RIRSGGH 93 (520)
Q Consensus 58 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~ggGh 93 (520)
..|..+++..+++++.++.+-|.+.|+|. .++=.|+
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 46999999999999999999999999985 5566665
No 52
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=26.85 E-value=24 Score=37.52 Aligned_cols=28 Identities=18% Similarity=0.337 Sum_probs=18.7
Q ss_pred hhhcccc-ccHHHHHHHHhhcCCCCCCCC
Q 035812 482 YGAKYFK-GNYKRLVEVKTKVDPFNFFKN 509 (520)
Q Consensus 482 ~~~~y~g-~n~~RL~~iK~kYDP~nvF~~ 509 (520)
|-...+| ..++=+++||+.+||+|+|+-
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 4344444 468999999999999999963
No 53
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=25.31 E-value=52 Score=25.43 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=28.1
Q ss_pred ccEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcccCCCCeEEEEeecccc
Q 035812 60 PLAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSYTSTVPFVVLDMFNLRK 116 (520)
Q Consensus 60 p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvIdl~~~~~ 116 (520)
--.++.|++-+|.++++...++.. .|+|+|+.|+.
T Consensus 6 ~Ivv~~P~sy~Da~~I~d~Lr~~~----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 6 TIVPVELHSFEDAQVIGGAFRDGD----------------------AVVFDMSLLSR 40 (87)
T ss_dssp SCEEEECSSGGGHHHHHHHHHTTC----------------------CEEEECTTSCH
T ss_pred EEEEEecCcHHHHHHHHHHHHCCC----------------------EEEEECCCCCH
Confidence 347899999999999999877521 58899988764
No 54
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=24.28 E-value=68 Score=24.13 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=28.5
Q ss_pred EEEecCCHHHHHHHHHHHHHCCCeEEEEeCccC
Q 035812 62 AIVTPNHRSHVQATIKCSNQAGLELRIRSGGHD 94 (520)
Q Consensus 62 ~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~ 94 (520)
+|-...+.+|+..+|+-.+.+|.|+++.-.|.+
T Consensus 30 yirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 30 YIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred eeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 466788999999999999999999998877754
No 55
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=23.63 E-value=1.3e+02 Score=25.78 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=33.4
Q ss_pred cEEEecCCHHHHHHHHHHHHHCCCeEEEEeCccCCCCCcc
Q 035812 61 LAIVTPNHRSHVQATIKCSNQAGLELRIRSGGHDYEGLSY 100 (520)
Q Consensus 61 ~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~ 100 (520)
...+.|.+.++++++++.+.+.+.-+.+..||.+....+.
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~ 86 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQ 86 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcC
Confidence 4578899999999999998876688999999998765443
No 56
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=21.22 E-value=37 Score=27.49 Aligned_cols=14 Identities=29% Similarity=0.494 Sum_probs=11.9
Q ss_pred HHHHhhcCCCCCCC
Q 035812 495 VEVKTKVDPFNFFK 508 (520)
Q Consensus 495 ~~iK~kYDP~nvF~ 508 (520)
.+|++||||++-++
T Consensus 84 ~~L~~KyDP~g~y~ 97 (109)
T 2gvs_A 84 AQLKAKYDPDGTYS 97 (109)
T ss_dssp HHHHHHHCTTCTTT
T ss_pred HHHHHHHCCCchHH
Confidence 56789999999886
No 57
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=21.04 E-value=62 Score=32.10 Aligned_cols=28 Identities=18% Similarity=0.151 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHHCCCeEEEE--eCccC
Q 035812 67 NHRSHVQATIKCSNQAGLELRIR--SGGHD 94 (520)
Q Consensus 67 ~~~~dv~~~v~~a~~~~~~~~~~--ggGh~ 94 (520)
-|.+|++++|++|++.+|.|.+- .=||.
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPEID~PGH~ 121 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPELDSPNHM 121 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 58999999999999999998764 34665
No 58
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=20.85 E-value=1.7e+02 Score=25.29 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=32.6
Q ss_pred cEEEecCCHHHHHHHHHHHHHC-CCeEEEEeCccCCCCCc
Q 035812 61 LAIVTPNHRSHVQATIKCSNQA-GLELRIRSGGHDYEGLS 99 (520)
Q Consensus 61 ~~vv~p~~~~dv~~~v~~a~~~-~~~~~~~ggGh~~~g~~ 99 (520)
...+.|.+.++|.++++.+.+. +.-+.+..||.+....+
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D 85 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGD 85 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCC
Confidence 4578899999999999998876 68899999998875544
Done!