Your job contains 1 sequence.
>035814
MEERLWSKQWKMKKIDWQACAGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKF
DKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSP
VAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRA
SSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHD
WVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVP
KLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANE
SIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPWLFEAPQTRRAPAQNYQAF
EA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035814
(422 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2020332 - symbol:STIPL1 "SPLICEOSOMAL TIMEKEEP... 800 1.2e-79 1
TAIR|locus:2053839 - symbol:AT2G42330 species:3702 "Arabi... 761 1.7e-75 1
MGI|MGI:1930075 - symbol:Tfip11 "tuftelin interacting pro... 490 4.6e-46 1
UNIPROTKB|Q0IIX9 - symbol:tfip11 "Tuftelin-interacting pr... 489 5.4e-46 1
RGD|1311449 - symbol:Tfip11 "tuftelin interacting protein... 485 1.6e-45 1
UNIPROTKB|Q66J74 - symbol:tfip11 "Tuftelin-interacting pr... 477 1.1e-44 1
UNIPROTKB|Q06AK6 - symbol:TFIP11 "Tuftelin-interacting pr... 476 1.5e-44 1
UNIPROTKB|Q5R5K8 - symbol:TFIP11 "Tuftelin-interacting pr... 475 2.0e-44 1
UNIPROTKB|Q9UBB9 - symbol:TFIP11 "Tuftelin-interacting pr... 473 3.3e-44 1
UNIPROTKB|A1XD93 - symbol:TFIP11 "Tuftelin-interacting pr... 473 3.3e-44 1
UNIPROTKB|A1XD94 - symbol:TFIP11 "Tuftelin-interacting pr... 473 3.3e-44 1
UNIPROTKB|A1XD95 - symbol:TFIP11 "Tuftelin-interacting pr... 473 3.3e-44 1
UNIPROTKB|Q29RR5 - symbol:TFIP11 "Tuftelin-interacting pr... 470 6.9e-44 1
UNIPROTKB|F1MR60 - symbol:TFIP11 "Tuftelin-interacting pr... 468 1.1e-43 1
UNIPROTKB|A1XD97 - symbol:TFIP11 "Tuftelin-interacting pr... 467 1.5e-43 1
UNIPROTKB|A4UMC6 - symbol:TFIP11 "Tuftelin-interacting pr... 464 3.1e-43 1
UNIPROTKB|A4UMC5 - symbol:TFIP11 "Tuftelin-interacting pr... 461 6.6e-43 1
ZFIN|ZDB-GENE-040718-479 - symbol:tfip11 "tuftelin intera... 454 3.7e-42 1
UNIPROTKB|Q5ZII9 - symbol:TFIP11 "Tuftelin-interacting pr... 452 6.0e-42 1
UNIPROTKB|F1RG71 - symbol:TFIP11 "Tuftelin-interacting pr... 449 1.3e-41 1
DICTYBASE|DDB_G0274035 - symbol:stip-2 "sip1/TFIP11-like ... 307 3.7e-37 3
DICTYBASE|DDB_G0272608 - symbol:stip-1 "sip1/TFIP11-like ... 307 3.7e-37 3
FB|FBgn0024191 - symbol:sip1 "septin interacting protein ... 374 1.7e-33 1
WB|WBGene00007412 - symbol:stip-1 species:6239 "Caenorhab... 343 3.6e-30 1
UNIPROTKB|Q17784 - symbol:stip-1 "Septin and tuftelin-int... 343 3.6e-30 1
POMBASE|SPAC1486.03c - symbol:SPAC1486.03c "RNA-binding s... 197 2.4e-12 1
ASPGD|ASPL0000028823 - symbol:AN5578 species:162425 "Emer... 192 8.3e-12 1
UNIPROTKB|G4ND86 - symbol:MGG_00288 "Uncharacterized prot... 141 8.9e-07 2
>TAIR|locus:2020332 [details] [associations]
symbol:STIPL1 "SPLICEOSOMAL TIMEKEEPER LOCUS1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0031981 "nuclear lumen" evidence=IDA] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 EMBL:CP002684 GO:GO:0006355 GO:GO:0003677
GO:GO:0042752 GO:GO:0005681 GO:GO:0000398 EMBL:AC007651 KO:K13103
GO:GO:0031981 HOGENOM:HOG000230470 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 OMA:MPNQEID
IPI:IPI00524892 PIR:E86306 RefSeq:NP_173150.1 UniGene:At.20092
UniGene:At.69774 PRIDE:Q9SHG6 EnsemblPlants:AT1G17070.1
GeneID:838277 KEGG:ath:AT1G17070 TAIR:At1g17070 InParanoid:Q9SHG6
PhylomeDB:Q9SHG6 ProtClustDB:CLSN2681870 Genevestigator:Q9SHG6
Uniprot:Q9SHG6
Length = 849
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 156/320 (48%), Positives = 218/320 (68%)
Query: 44 RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFS 103
R ++E+A LQ+ K+ +K+ ++ E + + + +I+ +N+ G LTL+SLA F
Sbjct: 369 RNERESALSLQQEKEMLINEEEKQKRHLENMEYIADEISRIELENTSGNLTLDSLAIRFE 428
Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLD--SDH 161
+L+ Y + LS +A SLA PLFIR FQGWDPL + + L+ +S WR++L+ DH
Sbjct: 429 DLQTSYPDDYKLCSLSTIACSLALPLFIRMFQGWDPLSDAVHGLKAISSWRKLLEVEEDH 488
Query: 162 G-YVY---YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTI 217
+V Y+QLVS+ +LPAVR + I+ W+ +DPEPML+FL+ W+ LLP S+L TILDT+
Sbjct: 489 NIWVVSTPYSQLVSEVVLPAVRIAGINTWEPRDPEPMLRFLETWETLLPSSVLQTILDTV 548
Query: 218 VMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDAS 277
V+PK+S V+ WDPR E +IH WVH WLP LG+K + L+++I +KL VLDAWHPSD+S
Sbjct: 549 VLPKLSTAVEYWDPRRELVAIHVWVHPWLPILGQKLEFLYQIIQMKLSNVLDAWHPSDSS 608
Query: 278 AYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPS 333
AY +LSPWK V WEQLM RYIVPKLQ+ +QE ++NPANQ L +F WVM WASA+P
Sbjct: 609 AYTILSPWKTVFDTTSWEQLMRRYIVPKLQLALQEFQVNPANQNLERFDWVMKWASAVPI 668
Query: 334 S-PNDFEEIRKWYKGWKDLL 352
D E R ++ W D+L
Sbjct: 669 HLMADMME-RFFFPKWLDVL 687
Score = 192 (72.6 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 65/227 (28%), Positives = 106/227 (46%)
Query: 169 LVSQAILPAVRASSISNWDAKDPEPMLK-FLDCWKMLLPYSLLNTILDTIVMPKMSDVVD 227
++ +LP + ++++ WD + + ++ W +L L L I+ K+S+V+D
Sbjct: 544 ILDTVVLPKL-STAVEYWDPRRELVAIHVWVHPWLPILGQKL--EFLYQIIQMKLSNVLD 600
Query: 228 SWDPR-SETYSIHDWVHQWLPWLGRKQ-KGLFRMILI-KLGEVLDAWHPSDASAYILLSP 284
+W P S Y+I + W + L R ++ KL L + + A+ +
Sbjct: 601 AWHPSDSSAYTI---LSPWKTVFDTTSWEQLMRRYIVPKLQLALQEFQVNPANQNLERFD 657
Query: 285 WKNVLWEQLMHRYIVP-KLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRK 343
W + W VP L + E P + +HW+ + P FEEI+
Sbjct: 658 WV-MKWASA-----VPIHLMADMMERFFFPKWLDVL-YHWLRA-------KPR-FEEIQG 702
Query: 344 WYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLN 390
WY GWK+L PQEL ANE IR QL G+DM+ +AV+GV++ P N
Sbjct: 703 WYYGWKELFPQELTANERIRIQLKRGLDMLMEAVEGVEVSQPRAKAN 749
>TAIR|locus:2053839 [details] [associations]
symbol:AT2G42330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 EMBL:AC005956 eggNOG:NOG312699
HOGENOM:HOG000230470 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 ProtClustDB:CLSN2681870
IPI:IPI00516585 PIR:F84852 RefSeq:NP_001078041.1 RefSeq:NP_181762.1
UniGene:At.43444 UniGene:At.49245 PRIDE:Q9SLC6
EnsemblPlants:AT2G42330.1 EnsemblPlants:AT2G42330.2 GeneID:818834
KEGG:ath:AT2G42330 TAIR:At2g42330 InParanoid:Q9SLC6 OMA:RENISYH
PhylomeDB:Q9SLC6 ArrayExpress:Q9SLC6 Genevestigator:Q9SLC6
Uniprot:Q9SLC6
Length = 752
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 153/319 (47%), Positives = 212/319 (66%)
Query: 44 RIKKETAFCLQRNKDKFDKMRAAEKQK--FDDAETVLNTLDQIQKKNSLGTLTLESLAND 101
R +K A LQ+ K+KF KM +KQK FD+ V +D+I+ + + G LTL+SLAN
Sbjct: 272 RNEKGLALSLQQEKEKF-KM-GVKKQKTLFDNLGYVAEEIDRIEVEIASGNLTLDSLANR 329
Query: 102 FSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLD-SD 160
F +L+ Y +LS +A SLA PLFIR FQGWDPL + + +E +S W+ +L+ D
Sbjct: 330 FKDLRSSYPDDYKCCNLSCIASSLALPLFIRMFQGWDPLSDAEHGIEAISSWKMLLEVED 389
Query: 161 HGYVY--YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIV 218
+ + Y+QLVS+ ILPAVR S I+ W+ +DPEPML+ L+ W+ +LP + TIL T+V
Sbjct: 390 NQSISTPYSQLVSEVILPAVRVSGINTWEPRDPEPMLRLLETWEKMLPSLIFETILTTVV 449
Query: 219 MPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASA 278
+PK+S ++SW+PR ET IH WVH WLP LG+K + +++I +K G +LDAWHPSD S
Sbjct: 450 LPKLSIAIESWEPRLETVPIHFWVHPWLPVLGQKLESAYQIIRMKFGNLLDAWHPSDVSV 509
Query: 279 YILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSS 334
+ +LSPWK V WEQLM RYIVPKLQV +QE +INPA+Q L +F+ VM W S++P
Sbjct: 510 HTILSPWKTVFDAASWEQLMRRYIVPKLQVALQEFQINPADQNLDEFNLVMGWVSSVPIH 569
Query: 335 -PNDFEEIRKWYKGWKDLL 352
D E R ++ W D+L
Sbjct: 570 LMTDLME-RFFFPKWLDVL 587
Score = 149 (57.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 58/233 (24%), Positives = 107/233 (45%)
Query: 166 YAQLVSQAILPAVRASSISNWDAK-DPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSD 224
+ +++ +LP + + +I +W+ + + P+ ++ W +L L + I+ K +
Sbjct: 441 FETILTTVVLPKL-SIAIESWEPRLETVPIHFWVHPWLPVLGQKLESAY--QIIRMKFGN 497
Query: 225 VVDSWDPRSETYSIHDWVHQWLPWLGRKQ-KGLFRMILI-KLGEVLDAW--HPSDASAYI 280
++D+W P S+ S+H + W + L R ++ KL L + +P+D +
Sbjct: 498 LLDAWHP-SDV-SVHTILSPWKTVFDAASWEQLMRRYIVPKLQVALQEFQINPADQN--- 552
Query: 281 LLSPWKNVL-WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFE 339
L + V+ W + +++ L ++ LY HW+ S P F+
Sbjct: 553 -LDEFNLVMGWVSSVPIHLMTDL---MERFFFPKWLDVLY--HWLCS-------EPK-FD 598
Query: 340 EIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYS 392
EI KW+ GWK PQEL AN I Q G+DM +AV+ +++ P N S
Sbjct: 599 EIMKWFLGWKGTFPQELSANRRIEIQFKRGLDMAREAVERMEMSQPGARENIS 651
>MGI|MGI:1930075 [details] [associations]
symbol:Tfip11 "tuftelin interacting protein 11"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005622 "intracellular"
evidence=NAS] [GO:0005634 "nucleus" evidence=ISA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
"cell differentiation" evidence=NAS] [GO:0030198 "extracellular
matrix organization" evidence=NAS] [GO:0031214 "biomineral tissue
development" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
MGI:MGI:1930075 GO:GO:0005737 GO:GO:0030154 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0005578
GO:GO:0006397 GO:GO:0030198 GO:GO:0005681 GO:GO:0031214
GO:GO:0071013 KO:K13103 UniGene:Mm.172947 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:AF290474 EMBL:BC017682 IPI:IPI00112101
RefSeq:NP_061253.2 ProteinModelPortal:Q9ERA6 STRING:Q9ERA6
PhosphoSite:Q9ERA6 PaxDb:Q9ERA6 PRIDE:Q9ERA6
Ensembl:ENSMUST00000031288 GeneID:54723 KEGG:mmu:54723
InParanoid:Q9ERA6 NextBio:311578 Bgee:Q9ERA6 CleanEx:MM_TFIP11
Genevestigator:Q9ERA6 GermOnline:ENSMUSG00000029345 Uniprot:Q9ERA6
Length = 838
Score = 490 (177.5 bits), Expect = 4.6e-46, P = 4.6e-46
Identities = 105/326 (32%), Positives = 177/326 (54%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L T+ ++ +D + +++ L +K ++ A E++ + VL +++
Sbjct: 325 LQLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTAEVLAHEERVISNLSKVLALVEEC 384
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ + LTL+ A F L+ K Y + + +A ++ +PL F+ W PL+
Sbjct: 385 ERRMQPHGADPLTLDECARIFETLQDKYYEEYRLADRADLAVAIVYPLVKDYFKDWHPLE 444
Query: 142 NPSYQLELVSMWRQVLDSDHGYVYYAQ-LVSQAI--------LPAVRASSISNWDAKDPE 192
+ SY +++S W+ +L++D + +Q L S A +P VR + ++ W ++ E
Sbjct: 445 DGSYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRLMWEVWMPFVR-NVVAQWQPRNCE 503
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ VD+W+P ++T IH W+H WLP + +
Sbjct: 504 PMVDFLDSWAHIIPVWILDNILDQLIFPKLQKEVDNWNPLTDTVPIHSWIHPWLPLMQAR 563
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ + KL L WHPSDASA ++L PWK VL WE M R IVPKL + + E
Sbjct: 564 LEPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLTPGSWEAFMLRNIVPKLGMCLGE 623
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WVM W I S
Sbjct: 624 LVINPHQQHMDAFYWVMDWEGMISVS 649
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 69/257 (26%), Positives = 114/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+S
Sbjct: 524 ILDQLIFPKLQ-KEVDNWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPVRSKLSS 577
Query: 225 VVDSWDPR--SETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P S + W P G + + R I+ KLG L + ++
Sbjct: 578 ALQKWHPSDASAKLILQPWKEVLTP--GSWEAFMLRNIVPKLGMCLGELVINPHQQHMDA 635
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 636 FYWV-MDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 681
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 682 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 741
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 742 KDFQYEAMQERRE-AEN 757
>UNIPROTKB|Q0IIX9 [details] [associations]
symbol:tfip11 "Tuftelin-interacting protein 11"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 EMBL:DQ342032
EMBL:BC121497 RefSeq:NP_001090845.1 UniGene:Str.52797 STRING:Q0IIX9
GeneID:100038256 KEGG:xtr:100038256 Xenbase:XB-GENE-984521
Uniprot:Q0IIX9
Length = 825
Score = 489 (177.2 bits), Expect = 5.4e-46, P = 5.4e-46
Identities = 102/326 (31%), Positives = 175/326 (53%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ ND + +++ L +K ++ E++ + VL T+++
Sbjct: 313 LQLLIDMTEQEIIQNDRQLQYEQDMVVNLTHELEKLSEVLEREEKAIQNLSKVLETVEEC 372
Query: 85 QKKNSL---GTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ LTLE A F L+ K Y + + ++ ++ +PL F+ W+PL+
Sbjct: 373 ERRIQPMCDNPLTLEECARIFEMLQDKYYEEYKMSEKADLSVAIVYPLMKDYFKDWNPLR 432
Query: 142 NPSYQLELVSMWRQVLDSDHGYVY---------YAQLVSQAILPAVRASSISNWDAKDPE 192
+P+Y +++S W+ +L+ H + Y +L+ + +P +R S I+ W ++
Sbjct: 433 DPTYGTDVMSKWKNLLEEGHLLSHSAHDASMDPYHRLLWETWVPLLR-SIIAQWQPRNCA 491
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLDCW LLP +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 492 PMVDFLDCWVHLLPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQSR 551
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ LF I KL L WHPSD+SA ++L PWK V WE M + I+PKL + + E
Sbjct: 552 LEPLFSPIRNKLANALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKNILPKLGMCLSE 611
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
INP Q + FHWV W + S
Sbjct: 612 FVINPHQQHMEVFHWVTDWEGMVSLS 637
Score = 158 (60.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 63/250 (25%), Positives = 113/250 (45%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVD 227
++ Q I P ++ + NW+ D P+ ++ W L+ S L + I K+++ +
Sbjct: 512 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPWLPLMQ-SRLEPLFSPI-RNKLANALQ 568
Query: 228 SWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPW 285
W P + + W + P G + + + IL KLG L + + ++ + W
Sbjct: 569 KWHPSDSSAKLILQPWKEVFTP--GSWEAFMVKNILPKLGMCLSEFVINPHQQHMEVFHW 626
Query: 286 KNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWY 345
WE ++ + V + E P K Q + SW S ++PN +EEI KWY
Sbjct: 627 VTD-WEGMVSLSSI----VGILEKHFFP---KWLQV--LCSWLS---NNPN-YEEITKWY 672
Query: 346 KGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAH-SLNYSLPGMRSLKP 401
GWK + ++A+ +I+ + + +D++ +AV G + P A S+ Y L K
Sbjct: 673 LGWKSMFSDLVLAHPAIKDKFNEALDIMNRAVSSSVGAYMQPGARESIAY-LTQTERRKD 731
Query: 402 WLFEAPQTRR 411
+ +EA Q RR
Sbjct: 732 FQYEAMQERR 741
>RGD|1311449 [details] [associations]
symbol:Tfip11 "tuftelin interacting protein 11" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA;ISO] [GO:0031214 "biomineral tissue
development" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 RGD:1311449 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0016607 GO:GO:0005578 GO:GO:0006397
GO:GO:0005681 GO:GO:0031214 GO:GO:0071013 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:DQ342031 EMBL:BC085809 IPI:IPI00190035
RefSeq:NP_001008292.1 UniGene:Rn.161710 STRING:Q5U2Y6
PhosphoSite:Q5U2Y6 PRIDE:Q5U2Y6 Ensembl:ENSRNOT00000000828
GeneID:288718 KEGG:rno:288718 InParanoid:Q5U2Y6 NextBio:628609
Genevestigator:Q5U2Y6 Uniprot:Q5U2Y6
Length = 837
Score = 485 (175.8 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 104/326 (31%), Positives = 176/326 (53%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L T+ ++ +D + +++ L +K ++ A E++ + VL +++
Sbjct: 324 LQLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTAEVLAHEERVISNLSKVLALVEEC 383
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+ + + LTL+ A F L+ K Y + + +A ++ +PL F+ W PL+
Sbjct: 384 EHRMQPHGADPLTLDECARIFETLQDKYYEEYRLADRADLAVAIVYPLVKDYFKDWHPLE 443
Query: 142 NPSYQLELVSMWRQVLDSDHGYVYYAQ-LVSQAI--------LPAVRASSISNWDAKDPE 192
+ +Y +++S W+ +L++D + +Q L S A +P VR + ++ W ++ E
Sbjct: 444 DSNYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRLMWEVWMPFVR-NVVAQWQPRNCE 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ VD+W+P ++T IH W+H WLP + +
Sbjct: 503 PMVDFLDSWAHIIPVWILDNILDQLIFPKLQKEVDNWNPLTDTVPIHSWIHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ + KL L WHPSDASA ++L PWK VL WE M R IVPKL + + E
Sbjct: 563 LEPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLTPGSWEAFMLRNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WVM W I S
Sbjct: 623 LVINPHQQHMDAFYWVMDWEGMISVS 648
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 69/257 (26%), Positives = 114/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+S
Sbjct: 523 ILDQLIFPKLQ-KEVDNWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPVRSKLSS 576
Query: 225 VVDSWDPR--SETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P S + W P G + + R I+ KLG L + ++
Sbjct: 577 ALQKWHPSDASAKLILQPWKEVLTP--GSWEAFMLRNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-MDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 741 KDFQYEAMQERRE-AEN 756
>UNIPROTKB|Q66J74 [details] [associations]
symbol:tfip11 "Tuftelin-interacting protein 11"
species:8355 "Xenopus laevis" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 KO:K13103
CTD:24144 HOVERGEN:HBG055868 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 EMBL:DQ342033 EMBL:BC081033
RefSeq:NP_001087642.1 UniGene:Xl.4331 GeneID:447466 KEGG:xla:447466
Xenbase:XB-GENE-984527 Uniprot:Q66J74
Length = 824
Score = 477 (173.0 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 101/325 (31%), Positives = 172/325 (52%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ ND + +++ L +K ++ E + ++ VL T+++
Sbjct: 313 LQLLIDMTEQEIIQNDRQLQYEQDMVVNLTHELEKLSEVLEREDKAIENLSKVLETVEEC 372
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ LTLE A F L+ K Y + + ++ ++ +PL F+ W+PL+
Sbjct: 373 ERRIQPTCDNPLTLEECARIFEMLQDKYYEEYKMSEKADLSVAIVYPLMKDYFKDWNPLR 432
Query: 142 NPSYQLELVSMWRQVLDSDH--------GYVYYAQLVSQAILPAVRASSISNWDAKDPEP 193
+P+Y +++S W+ +L+ H Y +L+ + +P +R + I+ W ++ P
Sbjct: 433 DPNYGTDVMSKWKNLLEEGHLSHSAHDAAMDPYHRLLWEMWVPFLR-NIIAQWQPRNCAP 491
Query: 194 MLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQ 253
M FLD W LLP +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 492 MADFLDSWVHLLPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPMMQSRL 551
Query: 254 KGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQEL 309
+ LF I KL L WHPSD+SA ++L PWK V WE M + IVPKL + + E
Sbjct: 552 EPLFSPIRNKLSNALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKNIVPKLGMCLSEF 611
Query: 310 EINPANQKLYQFHWVMSWASAIPSS 334
INP Q + FHWV W + S
Sbjct: 612 VINPHQQHMEVFHWVTDWEGMVALS 636
Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 76/309 (24%), Positives = 135/309 (43%)
Query: 117 HLSPVAYSLAFPLFIRT-FQGWDP-LQN--PSYQLELVSMWRQVLDS-DHGYVYYA--QL 169
HLS A+ A + R ++ W P L+N +Q + LDS H + +
Sbjct: 452 HLSHSAHDAAMDPYHRLLWEMWVPFLRNIIAQWQPRNCAPMADFLDSWVHLLPVWILDNI 511
Query: 170 VSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDS 228
+ Q I P ++ + NW+ D P+ ++ W ++ S L + I K+S+ +
Sbjct: 512 LDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPWLPMMQ-SRLEPLFSPI-RNKLSNALQK 568
Query: 229 WDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWK 286
W P + + W + P G + + + I+ KLG L + + ++ + W
Sbjct: 569 WHPSDSSAKLILQPWKEVFTP--GSWEAFMVKNIVPKLGMCLSEFVINPHQQHMEVFHWV 626
Query: 287 NVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIRKWYK 346
WE ++ L V LE K + W+ S + ++PN +EEI KWY
Sbjct: 627 TD-WEGMV------ALSSIVGLLE------KHFFPKWLQVLCSWLSNNPN-YEEITKWYL 672
Query: 347 GWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAH-SLNYSLPGMRSLKPW 402
GWK + ++A+ +I+ + + +D++ +AV G + P A S+ Y L K +
Sbjct: 673 GWKSMFSDLVLAHPAIKDKFNEALDIMNRAVSSSVGAYMQPGARESIAY-LTQTEKRKDF 731
Query: 403 LFEAPQTRR 411
+EA Q RR
Sbjct: 732 QYEAMQERR 740
>UNIPROTKB|Q06AK6 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9823 "Sus scrofa" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031214
"biomineral tissue development" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0005681
GO:GO:0031214 KO:K13103 eggNOG:NOG312699 HOGENOM:HOG000230470
HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 EMBL:DQ923315
RefSeq:NP_001070682.1 UniGene:Ssc.23477 STRING:Q06AK6 PRIDE:Q06AK6
GeneID:768099 KEGG:ssc:768099 CTD:663492 Uniprot:Q06AK6
Length = 836
Score = 476 (172.6 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 102/326 (31%), Positives = 177/326 (54%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L T+ ++ ND + +++ L +K ++ E++ + VL +++
Sbjct: 323 LQLLIELTEQEIIQNDRQLQYERDMVVNLSHELEKMAEVLEHEERVISNLSKVLEMVEEC 382
Query: 85 QKKNSLGT---LTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ G LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 383 ERRLQPGCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKDYFKEWDPLK 442
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E++S W+ +L++D HG + +L+ + +P VR + ++ W ++ +
Sbjct: 443 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 501
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD +V PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 502 PMVDFLDSWVHIIPVWILDNILDQLVFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 561
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 562 LEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 621
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 622 LVINPHQQHMDAFYWVIDWEGMISVS 647
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 65/257 (25%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q + P ++ + NW+ D P+ ++ W LP L+ L+ + P K++
Sbjct: 522 ILDQLVFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPIRSKLAS 575
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 576 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 633
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 634 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 679
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 680 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 739
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 740 KDFQYEAMQERRE-AEN 755
>UNIPROTKB|Q5R5K8 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9601 "Pongo abelii" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
GO:GO:0005681 GO:GO:0031214 KO:K13103 CTD:24144
HOGENOM:HOG000230470 HOVERGEN:HBG055868 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 EMBL:CR860850
RefSeq:NP_001126744.1 UniGene:Pab.18632 GeneID:100173746
KEGG:pon:100173746 InParanoid:Q5R5K8 Uniprot:Q5R5K8
Length = 837
Score = 475 (172.3 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 101/326 (30%), Positives = 178/326 (54%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ ND + +++ L +K ++ E++ + VL +++
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVIFNLSKVLEMVEEC 383
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ N LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 384 ERRMQPNCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E++S W+ +L++D HG + +L+ + +P VR + ++ W ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVS 648
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 67/257 (26%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+S
Sbjct: 523 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPIRSKLSS 576
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 577 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 741 KDFQYEAMQERRE-AEN 756
>UNIPROTKB|Q9UBB9 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031214 "biomineral tissue development"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0006396 "RNA processing"
evidence=IC] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 EMBL:CH471095 GO:GO:0016607 GO:GO:0005578
GO:GO:0031214 GO:GO:0000398 GO:GO:0071013 EMBL:Z99714 EMBL:Z95115
KO:K13103 CTD:24144 eggNOG:NOG312699 HOGENOM:HOG000230470
HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 OMA:SMSHLYG
EMBL:AF070662 EMBL:AL080147 EMBL:AL050258 EMBL:BT007274
EMBL:CT841511 EMBL:BC011599 IPI:IPI00015924 IPI:IPI00220893
PIR:T12531 RefSeq:NP_001008697.1 RefSeq:NP_036275.1
UniGene:Hs.20225 ProteinModelPortal:Q9UBB9 IntAct:Q9UBB9
STRING:Q9UBB9 PhosphoSite:Q9UBB9 DMDM:22096235 PaxDb:Q9UBB9
PeptideAtlas:Q9UBB9 PRIDE:Q9UBB9 DNASU:24144
Ensembl:ENST00000405938 Ensembl:ENST00000407148
Ensembl:ENST00000407431 Ensembl:ENST00000407690 GeneID:24144
KEGG:hsa:24144 UCSC:uc003acq.2 UCSC:uc003acr.2
GeneCards:GC22M026887 HGNC:HGNC:17165 HPA:HPA027085 MIM:612747
neXtProt:NX_Q9UBB9 PharmGKB:PA38441 InParanoid:Q9UBB9
PhylomeDB:Q9UBB9 ChiTaRS:TFIP11 GenomeRNAi:24144 NextBio:46829
ArrayExpress:Q9UBB9 Bgee:Q9UBB9 CleanEx:HS_TFIP11
Genevestigator:Q9UBB9 GermOnline:ENSG00000100109 Uniprot:Q9UBB9
Length = 837
Score = 473 (171.6 bits), Expect = 3.3e-44, P = 3.3e-44
Identities = 100/326 (30%), Positives = 178/326 (54%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ ND + +++ L +K ++ E++ + VL +++
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ + LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E++S W+ +L++D HG + +L+ + +P VR + ++ W ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVS 648
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 67/257 (26%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+S
Sbjct: 523 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPIRSKLSS 576
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 577 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 741 KDFQYEAMQERRE-AEN 756
>UNIPROTKB|A1XD93 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9598 "Pan troglodytes" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0005681 GO:GO:0031214
GO:GO:0071013 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739 OMA:SMSHLYG
EMBL:DQ342026 RefSeq:NP_001073621.1 UniGene:Ptr.6572 STRING:A1XD93
PRIDE:A1XD93 Ensembl:ENSPTRT00000026524 GeneID:458725
KEGG:ptr:458725 InParanoid:A1XD93 NextBio:20839105 Uniprot:A1XD93
Length = 837
Score = 473 (171.6 bits), Expect = 3.3e-44, P = 3.3e-44
Identities = 100/326 (30%), Positives = 178/326 (54%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ ND + +++ L +K ++ E++ + VL +++
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ + LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLR 443
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E++S W+ +L++D HG + +L+ + +P VR + ++ W ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVS 648
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 67/257 (26%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+S
Sbjct: 523 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPIRSKLSS 576
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 577 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 741 KDFQYEAMQERRE-AEN 756
>UNIPROTKB|A1XD94 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9544 "Macaca mulatta" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0005681 GO:GO:0031214
GO:GO:0071013 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 OMA:SMSHLYG EMBL:DQ342027 RefSeq:NP_001073589.1
UniGene:Mmu.14330 STRING:A1XD94 Ensembl:ENSMMUT00000032991
GeneID:712691 KEGG:mcc:712691 NextBio:19980789 Uniprot:A1XD94
Length = 837
Score = 473 (171.6 bits), Expect = 3.3e-44, P = 3.3e-44
Identities = 100/326 (30%), Positives = 178/326 (54%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ ND + +++ L +K ++ E++ + VL +++
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ + LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E++S W+ +L++D HG + +L+ + +P VR + ++ W ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVS 648
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 67/257 (26%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+S
Sbjct: 523 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPIRSKLSS 576
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 577 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 741 KDFQYEAMQERRE-AEN 756
>UNIPROTKB|A1XD95 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9541 "Macaca fascicularis" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0005737 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 GO:GO:0031214 HOVERGEN:HBG055868
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 EMBL:DQ342028 EMBL:AB168161 Uniprot:A1XD95
Length = 837
Score = 473 (171.6 bits), Expect = 3.3e-44, P = 3.3e-44
Identities = 100/326 (30%), Positives = 178/326 (54%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ ND + +++ L +K ++ E++ + VL +++
Sbjct: 324 LQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEEC 383
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ + LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 384 ERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E++S W+ +L++D HG + +L+ + +P VR + ++ W ++ +
Sbjct: 444 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVS 648
Score = 156 (60.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 66/257 (25%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+S
Sbjct: 523 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPIRSKLSS 576
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 577 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA + RR A+N
Sbjct: 741 KDFQYEATRERRE-AEN 756
>UNIPROTKB|Q29RR5 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9913 "Bos taurus" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031214
"biomineral tissue development" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0005681
GO:GO:0031214 KO:K13103 EMBL:DQ342029 EMBL:BC114058 IPI:IPI00824913
RefSeq:NP_001039495.2 UniGene:Bt.56280 STRING:Q29RR5 PRIDE:Q29RR5
GeneID:509349 KEGG:bta:509349 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 InParanoid:Q29RR5
OrthoDB:EOG4BRWK2 NextBio:20868933 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 Uniprot:Q29RR5
Length = 837
Score = 470 (170.5 bits), Expect = 6.9e-44, P = 6.9e-44
Identities = 103/326 (31%), Positives = 173/326 (53%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L T+ ++ ND + +++ L +K E++ VL +++
Sbjct: 324 LQLLIELTEQEIIRNDRQLQYERDVVVNLTHELEKASGALQQEQRAIASLSEVLALVEEC 383
Query: 85 QKKNSLGT---LTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ G LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 384 ERRLQPGCSDPLTLDECARVFQTLRDKYYEEYRMSDRVDLAVAIVYPLMKDYFKEWDPLK 443
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E +S W+ +L++D HG + +L+ + +P VR S ++ W ++ +
Sbjct: 444 DCTYGTETISQWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-SIVAQWQPRNCD 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W L+P +L+ IL+ ++ PK+ V+SW+P ++T IH WVH WLP + +
Sbjct: 503 PMVDFLDSWAPLIPVWVLDNILEQLIFPKLQKEVESWNPLTDTVPIHSWVHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W + S
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMVSVS 648
Score = 150 (57.9 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 65/257 (25%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + +W+ D P+ ++ W LP L+ L+ + P K++
Sbjct: 523 ILEQLIFPKLQ-KEVESWNPLTDTVPIHSWVHPW---LP--LMQARLEPLYSPIRSKLAS 576
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 577 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-IDWEGMVS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGAREHIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 741 KDFQYEAMQERRE-AEN 756
>UNIPROTKB|F1MR60 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0071013 KO:K13103
RefSeq:NP_001039495.2 UniGene:Bt.56280 GeneID:509349
KEGG:bta:509349 CTD:24144 NextBio:20868933 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706
GeneTree:ENSGT00390000012739 OMA:SMSHLYG EMBL:DAAA02045526
EMBL:DAAA02045527 IPI:IPI01017463 Ensembl:ENSBTAT00000016296
Ensembl:ENSBTAT00000052574 Uniprot:F1MR60
Length = 837
Score = 468 (169.8 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 103/326 (31%), Positives = 173/326 (53%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L T+ ++ ND + +++ L +K E++ VL +++
Sbjct: 324 LQLLIELTEQEIIRNDRQLQYERDVVVNLTHELEKAAGALQQEQRAIASLSEVLALVEEC 383
Query: 85 QKKNSLGT---LTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ G LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 384 ERRLQPGCSDPLTLDECARVFQTLRDKYYEEYRMSDRVDLAVAIVYPLMKDYFKEWDPLK 443
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E +S W+ +L++D HG + +L+ + +P VR S ++ W ++ +
Sbjct: 444 DCTYGTETISQWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-SIVAQWQPRNCD 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W L+P +L+ IL+ ++ PK+ V+SW+P ++T IH WVH WLP + +
Sbjct: 503 PMVDFLDSWAPLIPVWVLDNILEQLIFPKLQKEVESWNPLTDTVPIHSWVHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W + S
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMVSVS 648
Score = 150 (57.9 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 65/257 (25%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + +W+ D P+ ++ W LP L+ L+ + P K++
Sbjct: 523 ILEQLIFPKLQ-KEVESWNPLTDTVPIHSWVHPW---LP--LMQARLEPLYSPIRSKLAS 576
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 577 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-IDWEGMVS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGAREHIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 741 KDFQYEAMQERRE-AEN 756
>UNIPROTKB|A1XD97 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9615 "Canis lupus familiaris" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031214 "biomineral tissue development" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
GO:GO:0005681 GO:GO:0031214 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739 OMA:SMSHLYG
EMBL:DQ342030 RefSeq:NP_001073577.1 UniGene:Cfa.45002 STRING:A1XD97
Ensembl:ENSCAFT00000018663 Ensembl:ENSCAFT00000044117
Ensembl:ENSCAFT00000045711 GeneID:477530 KEGG:cfa:477530
InParanoid:A1XD97 NextBio:20852993 Uniprot:A1XD97
Length = 837
Score = 467 (169.5 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 99/326 (30%), Positives = 178/326 (54%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ +D + +++ L +K ++ E++ + VL +++
Sbjct: 324 LQLLIDLTEQEIIQSDRQLQYERDMVVNLSHELEKMSEVLEHEERVIANLSKVLEMVEEC 383
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ + LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 384 ERRLQPSCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLK 443
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y +++S W+ +L++D HG + +L+ + +P VR + ++ W ++ +
Sbjct: 444 DCAYGTQVISRWKTLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVR-NIVTQWQPRNCD 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ V++W+P ++T IH WVH WLP + +
Sbjct: 503 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWVHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVS 648
Score = 158 (60.7 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 67/257 (26%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+S
Sbjct: 523 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWVHPW---LP--LMQARLEPLYSPIRSKLSS 576
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 577 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 741 KDFQYEAMQERRE-AEN 756
>UNIPROTKB|A4UMC6 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:13616 "Monodelphis domestica" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0005737 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 GO:GO:0031214 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:EF443270 RefSeq:NP_001091078.1 UniGene:Mdm.4707
Ensembl:ENSMODT00000013666 GeneID:100010097 KEGG:mdo:100010097
Uniprot:A4UMC6
Length = 834
Score = 464 (168.4 bits), Expect = 3.1e-43, P = 3.1e-43
Identities = 99/326 (30%), Positives = 177/326 (54%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ ND + +++ L +K ++ + E+ + VL +++
Sbjct: 321 LQLLIDITEQEIIQNDRQLQYERDMVVNLSHELEKMSEVLSHEETVITNLSKVLEMVEEC 380
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ + LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 381 ERRMQPDCSDPLTLDECARIFETLQEKYYEEYRMSDRVDLAVAIVYPLMKDYFKDWDPLK 440
Query: 142 NPSYQLELVSMWRQVLDSD----HGYVYYA-----QLVSQAILPAVRASSISNWDAKDPE 192
+ +Y +++ W+ +L++D HG A +L+ + +P VR + ++ W ++ +
Sbjct: 441 DCTYGTGIIAKWKSLLENDQILSHGGQDLAADAFHRLIWEMWMPFVR-NIVTQWQPRNCD 499
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 500 PMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQSR 559
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 560 LEPLYSPIRNKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLNE 619
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 620 LIINPHQQHMDAFYWVIDWEGMISVS 645
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 68/257 (26%), Positives = 117/257 (45%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ + L+ + P K+S
Sbjct: 520 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQSRLEPLYSPIRNKLSS 573
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L+ + ++
Sbjct: 574 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLNELIINPHQQHMDA 631
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 632 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 677
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ SI+ + + +D++ +AV G + P A L
Sbjct: 678 KWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 737
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 738 KDFQYEAMQERRE-AEN 753
>UNIPROTKB|A4UMC5 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9986 "Oryctolagus cuniculus" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0005737 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 GO:GO:0031214 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 CTD:663492 EMBL:EF443269 RefSeq:NP_001093435.1
UniGene:Ocu.7148 STRING:A4UMC5 GeneID:100101578 Uniprot:A4UMC5
Length = 837
Score = 461 (167.3 bits), Expect = 6.6e-43, P = 6.6e-43
Identities = 101/326 (30%), Positives = 173/326 (53%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L T+ ++ ND + +++ L DK ++ E++ + VL ++Q
Sbjct: 324 LQLLIELTEQEIIQNDRQLQYERDMVVNLSHELDKMAEVLEHEERAIANLSKVLELVEQC 383
Query: 85 QKKNS---LGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
++ LTL+ A F L+ K Y + +A ++ +PL F+ WD L+
Sbjct: 384 ARRLQPACSNPLTLDECARVFQTLQDKYYEEYRMSDRVDLAVAIVYPLMKDYFKDWDSLK 443
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ Y E++S W+ +L++D HG + +L+ + +P VR + ++ W ++ +
Sbjct: 444 DCRYGTEIISKWKSLLENDQLLSHGGQDLLADAFHRLMWEVWMPFVR-NIVTQWQPRNCD 502
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
PM+ FLD W ++P +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 503 PMVDFLDSWVHIIPVWVLDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 562
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 563 LEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 622
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 623 LVINPHQQHMDAFYWVIDWEGMISVS 648
Score = 159 (61.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 67/257 (26%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+S
Sbjct: 523 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPIRSKLSS 576
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 577 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 634
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 635 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 680
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 681 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 740
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 741 KDFQYEAMQERRE-AEN 756
Score = 37 (18.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 62 KMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLAN 100
K AAE+ + DD+E Q + LG L++ N
Sbjct: 86 KKGAAEEAELDDSEDEEKPGKQEELPKDLGPKKLKTGGN 124
>ZFIN|ZDB-GENE-040718-479 [details] [associations]
symbol:tfip11 "tuftelin interacting protein 11"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 ZFIN:ZDB-GENE-040718-479 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 EMBL:BC075755 EMBL:BC096995
IPI:IPI00513582 RefSeq:NP_001002721.1 UniGene:Dr.7492 STRING:Q6DI35
GeneID:436994 KEGG:dre:436994 InParanoid:Q6DI35 NextBio:20831412
ArrayExpress:Q6DI35 Uniprot:Q6DI35
Length = 832
Score = 454 (164.9 bits), Expect = 3.7e-42, P = 3.7e-42
Identities = 95/297 (31%), Positives = 157/297 (52%)
Query: 46 KKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLG--TLTLESLANDFS 103
+K+T L D A E++ E V++ +++ + + G L+L+ A F
Sbjct: 339 EKDTVVTLTHESDALQVRLAEEEETLGRLEQVMSLVERFEAGDKEGDPALSLQECAKIFE 398
Query: 104 NLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSD--- 160
L+ + Y L +A S+ PL + WDPL++ S LE V WR +L+S
Sbjct: 399 QLQTEFYQEYKTMGLGDLAVSVVHPLLKEKLRNWDPLKDCSDGLEEVGQWRAILESTLSL 458
Query: 161 HG------YVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTIL 214
H Y +L+ + +P +R + +S W ++ PM+ ++CW +LP +L+ +L
Sbjct: 459 HSGPDTTNMDPYHRLIWEVWVPVMR-TCVSQWQPRNVGPMVDCVECWAPVLPLWILDHVL 517
Query: 215 DTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPS 274
+ ++ P++ VD+W+P ++T IH W+H WLP + + + L+ I KL L WHPS
Sbjct: 518 EQLIFPRLQREVDNWNPLTDTVPIHSWIHPWLPLMQTRLEPLYAPIRSKLAHALQRWHPS 577
Query: 275 DASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSW 327
D+SA ++L PW++V WE M + IVPKL + + EL +NP Q L F+WVM W
Sbjct: 578 DSSARLILQPWRDVFTPGAWEAFMVKNIVPKLALCLGELVVNPHQQLLDPFNWVMDW 634
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 57/216 (26%), Positives = 102/216 (47%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ T L+ + P K++
Sbjct: 516 VLEQLIFPRLQRE-VDNWNPLTDTVPIHSWIHPW---LP--LMQTRLEPLYAPIRSKLAH 569
Query: 225 VVDSWDPR--SETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P S + W + P G + + + I+ KL L + LL
Sbjct: 570 ALQRWHPSDSSARLILQPWRDVFTP--GAWEAFMVKNIVPKLALCLGELVVNPHQQ--LL 625
Query: 283 SPWKNVL-WEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEI 341
P+ V+ WE ++ V + V + + P K Q + SW S ++PN +EEI
Sbjct: 626 DPFNWVMDWECMLS---VSSM-VGLLDKNFFP---KWLQV--LCSWLS---NNPN-YEEI 672
Query: 342 RKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAV 377
KWY GWK LL + L+++ ++ +L+ +D++ +AV
Sbjct: 673 TKWYLGWKGLLSENLLSHPLVKEKLNEALDIMNRAV 708
>UNIPROTKB|Q5ZII9 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0005578
GO:GO:0006397 GO:GO:0005681 GO:GO:0071013 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:AJ720795 IPI:IPI00588712 RefSeq:NP_001025836.1
UniGene:Gga.22499 ProteinModelPortal:Q5ZII9 STRING:Q5ZII9
Ensembl:ENSGALT00000009022 GeneID:416909 KEGG:gga:416909
InParanoid:Q5ZII9 NextBio:20820302 Uniprot:Q5ZII9
Length = 827
Score = 452 (164.2 bits), Expect = 6.0e-42, P = 6.0e-42
Identities = 97/326 (29%), Positives = 176/326 (53%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L + T+ ++ +D + +++ L K ++ + E+ + VL+ +++
Sbjct: 314 LQLLIDITEQEIIQSDRQLQYERDMVVNLTHEIQKMSEILSHEETAISNLSKVLDMVEEC 373
Query: 85 QKK---NSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ + LTL+ A F L+ K Y + +A ++ +PL F+ WDPL+
Sbjct: 374 ERRMQPSCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKDYFKNWDPLK 433
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E+++ W+ +L++D HG + +L+ + +P VR + ++ W ++
Sbjct: 434 DCTYGTEIIAKWKSLLENDQLLSHGGQDLSTDAFHRLMWEIWMPYVR-NIVAQWQPRNCG 492
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
M+ FLD W ++P +L+ ILD ++ PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 493 SMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 552
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 553 LEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLNE 612
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 613 LIINPHQQHMDAFYWVIDWEGMISVS 638
Score = 157 (60.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 67/257 (26%), Positives = 117/257 (45%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q I P ++ + NW+ D P+ ++ W LP L+ L+ + P K+++
Sbjct: 513 ILDQLIFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPIRNKLAN 566
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L+ + ++
Sbjct: 567 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLNELIINPHQQHMDA 624
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 625 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 670
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ SI+ + + +D++ +AV G + P A L
Sbjct: 671 KWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGARENIAYLTHTERR 730
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 731 KDFQYEAMQERRE-AEN 746
>UNIPROTKB|F1RG71 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0071013 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706
GeneTree:ENSGT00390000012739 OMA:SMSHLYG EMBL:CT841533
Ensembl:ENSSSCT00000010917 Uniprot:F1RG71
Length = 835
Score = 449 (163.1 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 98/326 (30%), Positives = 175/326 (53%)
Query: 26 LAMLKNGTKAQLAGNDGS-RIKKETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQI 84
L +L T+ ++ ND + +++ L +K ++ E++ + VL +++
Sbjct: 323 LQLLIELTEQEIIQNDRQLQYERDMVVNLSHELEKMAEVLEHEERVISNLSKVLEMVEEC 382
Query: 85 QKKNSLGT---LTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQ 141
+++ G LTL+ A F L+ + Y + +A ++ +PL F+ WDPL+
Sbjct: 383 ERRLQPGCSNPLTLDECARIFETLQGQYYEEYRMSDRVDLAVAIVYPLMKDYFKEWDPLK 442
Query: 142 NPSYQLELVSMWRQVLDSD----HGYV-----YYAQLVSQAILPAVRASSISNWDAKDPE 192
+ +Y E++S W+ +L++D HG + +L+ + +P+ R + ++ W ++ +
Sbjct: 443 DCTYGTEIISKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPSFR-NIVTQWQPRNCD 501
Query: 193 PMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRK 252
+ FLD W ++P +L+ ILD +V PK+ V++W+P ++T IH W+H WLP + +
Sbjct: 502 -QVDFLDSWVHIIPVWILDNILDQLVFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQAR 560
Query: 253 QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQE 308
+ L+ I KL L WHPSD+SA ++L PWK+V WE M + IVPKL + + E
Sbjct: 561 LEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGE 620
Query: 309 LEINPANQKLYQFHWVMSWASAIPSS 334
L INP Q + F+WV+ W I S
Sbjct: 621 LVINPHQQHMDAFYWVIDWEGMISVS 646
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 65/257 (25%), Positives = 115/257 (44%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP---KMSD 224
++ Q + P ++ + NW+ D P+ ++ W LP L+ L+ + P K++
Sbjct: 521 ILDQLVFPKLQ-KEVENWNPLTDTVPIHSWIHPW---LP--LMQARLEPLYSPIRSKLAS 574
Query: 225 VVDSWDPRSETYSI--HDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILL 282
+ W P + + W + P G + + + I+ KLG L + ++
Sbjct: 575 ALQKWHPSDSSAKLILQPWKDVFTP--GSWEAFMVKNIVPKLGMCLGELVINPHQQHMDA 632
Query: 283 SPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEIR 342
W + WE ++ V L V + E P K Q + SW S +SPN +EEI
Sbjct: 633 FYWV-IDWEGMIS---VSSL-VGLLEKHFFP---KWLQV--LCSWLS---NSPN-YEEIT 678
Query: 343 KWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD---GVKIDPPAHSLNYSLPGMRSL 399
KWY GWK + +++A+ S++ + + +D++ +AV G + P A L
Sbjct: 679 KWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERR 738
Query: 400 KPWLFEAPQTRRAPAQN 416
K + +EA Q RR A+N
Sbjct: 739 KDFQYEAMQERRE-AEN 754
>DICTYBASE|DDB_G0274035 [details] [associations]
symbol:stip-2 "sip1/TFIP11-like interaction protein"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 dictyBase:DDB_G0274035
dictyBase:DDB_G0272608 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681
EMBL:AAFI02000011 EMBL:AAFI02000009 KO:K13103 eggNOG:NOG312699
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 EMBL:DQ342053 RefSeq:XP_644376.2
RefSeq:XP_645037.2 EnsemblProtists:DDB0233563
EnsemblProtists:DDB0266882 GeneID:8618714 GeneID:8619262
KEGG:ddi:DDB_G0272608 KEGG:ddi:DDB_G0274035 OMA:MPNQEID
ProtClustDB:CLSZ2431084 Uniprot:A1XDC0
Length = 894
Score = 307 (113.1 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 60/193 (31%), Positives = 102/193 (52%)
Query: 148 ELVSMWRQVLDSDHGYV--Y----YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCW 201
E+V WRQ+ + Y Y ++ LP + S WD K P + W
Sbjct: 457 EMVK-WRQLFQESVSVLGEYQINVYFLIMRDLFLPKFKNYLRSQWDVKKPSNAATLISTW 515
Query: 202 KMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMIL 261
LP + +L+ ++PK+ ++ WDPR++ + W+ W+P LG + + + +I
Sbjct: 516 SDTLPDVIQEALLEQSILPKLKVAIEKWDPRTDPIPLDHWLLPWIPLLGSELESFYPLIR 575
Query: 262 IKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQK 317
K+ L WHPSD SA +L+PWKN+ + L++R I+PKL ++++LEINP+NQK
Sbjct: 576 QKIISALQDWHPSDKSAIKILTPWKNIFQSNSMDSLLNRAIIPKLSKSIKDLEINPSNQK 635
Query: 318 L-YQFHWVMSWAS 329
+ W++ W++
Sbjct: 636 SPIEIQWLLRWSN 648
Score = 102 (41.0 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 316 QKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGK 375
+K + W+ + S + EEI WY GWK P+E+++N+ I++ +I ++++ K
Sbjct: 696 EKDFFTRWLKILLEWLKSPDANLEEISNWYSGWKKQFPKEIISNDKIKSIFNISLNLMKK 755
Query: 376 AVDGVKI 382
+ I
Sbjct: 756 VLSNETI 762
Score = 101 (40.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 115 IYHLSPVAYSLAFPLFIRTFQG-WDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQA 173
+Y L + L P F + WD ++ PS L+S W L V L+ Q+
Sbjct: 479 VYFL--IMRDLFLPKFKNYLRSQWD-VKKPSNAATLISTWSDTLPD----VIQEALLEQS 531
Query: 174 ILPAVRASSISNWDAK-DPEPMLKFLDCWKMLLPY-SLLNTILDT---IVMPKMSDVVDS 228
ILP ++ + I WD + DP P LD W LLP+ LL + L++ ++ K+ +
Sbjct: 532 ILPKLKVA-IEKWDPRTDPIP----LDHW--LLPWIPLLGSELESFYPLIRQKIISALQD 584
Query: 229 WDPRSET 235
W P ++
Sbjct: 585 WHPSDKS 591
Score = 69 (29.3 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 23/101 (22%), Positives = 38/101 (37%)
Query: 40 NDGSRIKKETAFC--LQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLES 97
N ++IK E L R +K +K++ +L T+ ++K+ L L+
Sbjct: 335 NQDNKIKHENDKINNLTRGVEKLKLTIENDKEQIKKVTEILETITTVKKQLDQSQLDLKQ 394
Query: 98 LANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWD 138
L F LK Y + L + L PL W+
Sbjct: 395 LYKVFKKLKSNYPKEYQNFKLYNLQKELLEPLLKEKLNQWE 435
Score = 41 (19.5 bits), Expect = 3.0e-34, Sum P(3) = 3.0e-34
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 39 GNDGSRIKKETAFCLQRNKDKFDKMRAAEKQK 70
G + + KKE Q+ K+K +K K+K
Sbjct: 93 GEEKKKKKKEKKEKKQKKKEKKEKKEKKNKKK 124
Score = 39 (18.8 bits), Expect = 4.9e-34, Sum P(3) = 4.9e-34
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 2 EERLWSKQW-KMKKIDWQACAGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKF 60
E ++ +++ KMKK + G + + + +L DG I + ++ K K
Sbjct: 44 ESKMTEEEYYKMKK-RYSTPVGFVASGIYEPN-EHKLKNKDGENIDNDDDDGEEKKKKKK 101
Query: 61 DKMRAAEKQK 70
+K +K+K
Sbjct: 102 EKKEKKQKKK 111
>DICTYBASE|DDB_G0272608 [details] [associations]
symbol:stip-1 "sip1/TFIP11-like interaction protein"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 dictyBase:DDB_G0274035
dictyBase:DDB_G0272608 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681
EMBL:AAFI02000011 EMBL:AAFI02000009 KO:K13103 eggNOG:NOG312699
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 EMBL:DQ342053 RefSeq:XP_644376.2
RefSeq:XP_645037.2 EnsemblProtists:DDB0233563
EnsemblProtists:DDB0266882 GeneID:8618714 GeneID:8619262
KEGG:ddi:DDB_G0272608 KEGG:ddi:DDB_G0274035 OMA:MPNQEID
ProtClustDB:CLSZ2431084 Uniprot:A1XDC0
Length = 894
Score = 307 (113.1 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 60/193 (31%), Positives = 102/193 (52%)
Query: 148 ELVSMWRQVLDSDHGYV--Y----YAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCW 201
E+V WRQ+ + Y Y ++ LP + S WD K P + W
Sbjct: 457 EMVK-WRQLFQESVSVLGEYQINVYFLIMRDLFLPKFKNYLRSQWDVKKPSNAATLISTW 515
Query: 202 KMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMIL 261
LP + +L+ ++PK+ ++ WDPR++ + W+ W+P LG + + + +I
Sbjct: 516 SDTLPDVIQEALLEQSILPKLKVAIEKWDPRTDPIPLDHWLLPWIPLLGSELESFYPLIR 575
Query: 262 IKLGEVLDAWHPSDASAYILLSPWKNVL----WEQLMHRYIVPKLQVTVQELEINPANQK 317
K+ L WHPSD SA +L+PWKN+ + L++R I+PKL ++++LEINP+NQK
Sbjct: 576 QKIISALQDWHPSDKSAIKILTPWKNIFQSNSMDSLLNRAIIPKLSKSIKDLEINPSNQK 635
Query: 318 L-YQFHWVMSWAS 329
+ W++ W++
Sbjct: 636 SPIEIQWLLRWSN 648
Score = 102 (41.0 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 316 QKLYQFHWVMSWASAIPSSPNDFEEIRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGK 375
+K + W+ + S + EEI WY GWK P+E+++N+ I++ +I ++++ K
Sbjct: 696 EKDFFTRWLKILLEWLKSPDANLEEISNWYSGWKKQFPKEIISNDKIKSIFNISLNLMKK 755
Query: 376 AVDGVKI 382
+ I
Sbjct: 756 VLSNETI 762
Score = 101 (40.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 115 IYHLSPVAYSLAFPLFIRTFQG-WDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQA 173
+Y L + L P F + WD ++ PS L+S W L V L+ Q+
Sbjct: 479 VYFL--IMRDLFLPKFKNYLRSQWD-VKKPSNAATLISTWSDTLPD----VIQEALLEQS 531
Query: 174 ILPAVRASSISNWDAK-DPEPMLKFLDCWKMLLPY-SLLNTILDT---IVMPKMSDVVDS 228
ILP ++ + I WD + DP P LD W LLP+ LL + L++ ++ K+ +
Sbjct: 532 ILPKLKVA-IEKWDPRTDPIP----LDHW--LLPWIPLLGSELESFYPLIRQKIISALQD 584
Query: 229 WDPRSET 235
W P ++
Sbjct: 585 WHPSDKS 591
Score = 69 (29.3 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 23/101 (22%), Positives = 38/101 (37%)
Query: 40 NDGSRIKKETAFC--LQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLES 97
N ++IK E L R +K +K++ +L T+ ++K+ L L+
Sbjct: 335 NQDNKIKHENDKINNLTRGVEKLKLTIENDKEQIKKVTEILETITTVKKQLDQSQLDLKQ 394
Query: 98 LANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWD 138
L F LK Y + L + L PL W+
Sbjct: 395 LYKVFKKLKSNYPKEYQNFKLYNLQKELLEPLLKEKLNQWE 435
Score = 41 (19.5 bits), Expect = 3.0e-34, Sum P(3) = 3.0e-34
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 39 GNDGSRIKKETAFCLQRNKDKFDKMRAAEKQK 70
G + + KKE Q+ K+K +K K+K
Sbjct: 93 GEEKKKKKKEKKEKKQKKKEKKEKKEKKNKKK 124
Score = 39 (18.8 bits), Expect = 4.9e-34, Sum P(3) = 4.9e-34
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 2 EERLWSKQW-KMKKIDWQACAGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKF 60
E ++ +++ KMKK + G + + + +L DG I + ++ K K
Sbjct: 44 ESKMTEEEYYKMKK-RYSTPVGFVASGIYEPN-EHKLKNKDGENIDNDDDDGEEKKKKKK 101
Query: 61 DKMRAAEKQK 70
+K +K+K
Sbjct: 102 EKKEKKQKKK 111
>FB|FBgn0024191 [details] [associations]
symbol:sip1 "septin interacting protein 1" species:7227
"Drosophila melanogaster" [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 EMBL:AE014134 GO:GO:0006355
GO:GO:0003677 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 CTD:66603
KO:K13103 eggNOG:NOG312699 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:AF221101 EMBL:AF145670 RefSeq:NP_524725.2
UniGene:Dm.1847 IntAct:Q9Y103 MINT:MINT-302413 PaxDb:Q9Y103
PRIDE:Q9Y103 EnsemblMetazoa:FBtr0079134 GeneID:44238
KEGG:dme:Dmel_CG7238 FlyBase:FBgn0024191 InParanoid:Q9Y103
OrthoDB:EOG4PVMDM PhylomeDB:Q9Y103 GenomeRNAi:44238 NextBio:837003
Bgee:Q9Y103 Uniprot:Q9Y103
Length = 839
Score = 374 (136.7 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 92/292 (31%), Positives = 147/292 (50%)
Query: 76 TVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQ 135
T+ +L+++++ L+L F L + + + L+ +A + PL R
Sbjct: 397 TLEESLERVERLIDNPDLSLPQAERLFRELLVDYAAEFHEFGLADLAAGVIAPLLKRELV 456
Query: 136 GWDPLQNPSYQLELVSMWRQVLDSDHGY------VY--YAQLVSQAILPAVRASSISNWD 187
W PL+NP+ L L+ WR +L V+ Y+ L+ ++P+ R+S+ + W
Sbjct: 457 QWQPLENPTEPLPLIKKWRGMLQQGDAAEQQPRNVFDPYSSLIWAGVMPSFRSSAAA-WQ 515
Query: 188 AKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLP 247
K+ PM LD W LLP +L+++L+ +V+P++ V WDP ++T I WV W
Sbjct: 516 PKEHPPMASLLDAWAPLLPSWVLDSVLEQLVLPRLVAGVQEWDPLTDTVPIDSWVLPWHA 575
Query: 248 WLGRK-QKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMH----RYIVPKL 302
LG K ++ ++ I KLG L AW P D SA +L+PW+ E+ M RYIVPKL
Sbjct: 576 ILGSKLEEAVYPQIRSKLGIALRAWSPHDRSARAMLTPWQKAFPEEEMQEFLQRYIVPKL 635
Query: 303 QVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEEI--RKWYKGWKDLL 352
Q T+ EL INP +Q L + V W I P ++ R ++ W +L
Sbjct: 636 QATLGELIINPMHQDLELWQQVWEWHELI--DPMYMAQLLDRHFFPRWMQVL 685
Score = 129 (50.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 56/218 (25%), Positives = 94/218 (43%)
Query: 169 LVSQAILPAVRASSISNWDA-KDPEPMLKFLDCWKMLLPY-SLLNTILDTIVMP----KM 222
++ Q +LP + A + WD D P +D W +LP+ ++L + L+ V P K+
Sbjct: 541 VLEQLVLPRLVAG-VQEWDPLTDTVP----IDSW--VLPWHAILGSKLEEAVYPQIRSKL 593
Query: 223 SDVVDSWDP--RSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYI 280
+ +W P RS + W + P Q+ L R I+ KL L + +
Sbjct: 594 GIALRAWSPHDRSARAMLTPW-QKAFPE-EEMQEFLQRYIVPKLQATLGELIINPMHQDL 651
Query: 281 LLSPWKNVLWEQLMHRYIVPKLQVTVQELEINPANQKLYQFHWVMSWASAIPSSPNDFEE 340
L W+ V WE H I P + + P W+ + SP D+ E
Sbjct: 652 EL--WQQV-WE--WHELIDPMYMAQLLDRHFFP--------RWMQVLVVWLNQSP-DYAE 697
Query: 341 IRKWYKGWKDLLPQELVANESIRAQLSIGVDMIGKAVD 378
I +WY GWK +L + L+ S++ L ++++ +A D
Sbjct: 698 ISRWYTGWKSMLSEPLLREPSVKEHLRRALEIMHRASD 735
>WB|WBGene00007412 [details] [associations]
symbol:stip-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0040011
GO:GO:0005681 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 EMBL:Z49908 KO:K13103 eggNOG:NOG312699
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 EMBL:DQ342049 RefSeq:NP_496226.2
UniGene:Cel.15961 DIP:DIP-25481N IntAct:Q17784 MINT:MINT-1082433
PaxDb:Q17784 PRIDE:Q17784 EnsemblMetazoa:C07E3.1a GeneID:174600
KEGG:cel:CELE_C07E3.1 UCSC:C07E3.1a CTD:174600 WormBase:C07E3.1a
GeneTree:ENSGT00390000012739 HOGENOM:HOG000230471 InParanoid:Q17784
OMA:SMSHLYG NextBio:884722 ArrayExpress:Q17784 Uniprot:Q17784
Length = 830
Score = 343 (125.8 bits), Expect = 3.6e-30, P = 3.6e-30
Identities = 88/304 (28%), Positives = 143/304 (47%)
Query: 47 KETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLK 106
K+ L+ + + K E+Q+ + V +D S ++E F L+
Sbjct: 351 KDQTTALEYDLQQVQKSLGTEEQEAQHIKDVYELIDGFSSNRSP---SMEECQELFRRLR 407
Query: 107 CKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLD-SDHGYVY 165
+ H Y +Y L VA PL + F W PL++ +Y EL+S WR +LD S +G
Sbjct: 408 SEFPHEYELYSLETVAIPTVLPLIQKYFVAWKPLEDKNYGCELISTWRDILDDSKNGRKM 467
Query: 166 --------------YAQLVSQAILPAVRASSISNWD-AKDPEPMLKFLDCWKMLLPYSLL 210
Y +++ + ILP++R + + WD + M++ ++ W LL +
Sbjct: 468 TFGHNKTKGDEIRAYDRIIWEGILPSIRRACLQ-WDPSTQMHEMIELVEQWIPLLSAWIT 526
Query: 211 NTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDA 270
IL+ +V+PK+++ V+ WDP ++ IH+W+ WL LG + + + I KL + L
Sbjct: 527 ENILEQLVVPKIAERVNQWDPMTDEIPIHEWLVPWLVLLGDRIQTVMPPIRQKLSKALKL 586
Query: 271 WHPSDASAYILLSPWKNVLWEQ-----LMHRYIVPKLQVTVQELEINPANQKLYQFHWV- 324
W P D SA L PW+NV W + + IVPKL V + +E+NP Y W
Sbjct: 587 WDPMDRSALETLRPWQNV-WSAATFSAFIAQNIVPKLGVALDTMELNPTMNPEYP-EWTA 644
Query: 325 -MSW 327
M W
Sbjct: 645 CMEW 648
Score = 157 (60.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 64/258 (24%), Positives = 116/258 (44%)
Query: 142 NPSYQL-ELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPE-PMLKFLD 199
+PS Q+ E++ + Q + ++ ++ Q ++P + A ++ WD E P+ ++L
Sbjct: 502 DPSTQMHEMIELVEQWIPLLSAWIT-ENILEQLVVPKI-AERVNQWDPMTDEIPIHEWLV 559
Query: 200 CWKMLLPYSLLNTILDTIVMPKMSDVVDSWDP--RSETYSIHDWVHQWLPWLGRKQKGLF 257
W +LL + T++ I K+S + WDP RS ++ W + W +
Sbjct: 560 PWLVLLG-DRIQTVMPPI-RQKLSKALKLWDPMDRSALETLRPWQNVWSA--ATFSAFIA 615
Query: 258 RMILIKLGEVLDAW--HPSDASAYILLSPWKNVL-WEQLMHRYIVPKLQVTVQELEINPA 314
+ I+ KLG LD +P+ Y W + W + H P + P
Sbjct: 616 QNIVPKLGVALDTMELNPTMNPEY---PEWTACMEWLEFTH----PDAIANIVTKYFFP- 667
Query: 315 NQKLYQFHWVMSWASAIPSSPN-DFEEIRKWYKGWKDLLPQELV----ANESIR-AQLSI 368
+ Y + + W SP D+ E+++WY WK +PQ LV NE++R + ++I
Sbjct: 668 --RFY--NCLCLWLD----SPGVDYNEVKRWYGSWKARIPQVLVNYPTVNENLRRSMIAI 719
Query: 369 GVDMIGKAVDGVKIDPPA 386
G + G+ V G++ P A
Sbjct: 720 GRSLQGEKVGGLQATPIA 737
>UNIPROTKB|Q17784 [details] [associations]
symbol:stip-1 "Septin and tuftelin-interacting protein 1
homolog" species:6239 "Caenorhabditis elegans" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 EMBL:Z49908 KO:K13103 eggNOG:NOG312699
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 EMBL:DQ342049 RefSeq:NP_496226.2
UniGene:Cel.15961 DIP:DIP-25481N IntAct:Q17784 MINT:MINT-1082433
PaxDb:Q17784 PRIDE:Q17784 EnsemblMetazoa:C07E3.1a GeneID:174600
KEGG:cel:CELE_C07E3.1 UCSC:C07E3.1a CTD:174600 WormBase:C07E3.1a
GeneTree:ENSGT00390000012739 HOGENOM:HOG000230471 InParanoid:Q17784
OMA:SMSHLYG NextBio:884722 ArrayExpress:Q17784 Uniprot:Q17784
Length = 830
Score = 343 (125.8 bits), Expect = 3.6e-30, P = 3.6e-30
Identities = 88/304 (28%), Positives = 143/304 (47%)
Query: 47 KETAFCLQRNKDKFDKMRAAEKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLK 106
K+ L+ + + K E+Q+ + V +D S ++E F L+
Sbjct: 351 KDQTTALEYDLQQVQKSLGTEEQEAQHIKDVYELIDGFSSNRSP---SMEECQELFRRLR 407
Query: 107 CKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDPLQNPSYQLELVSMWRQVLD-SDHGYVY 165
+ H Y +Y L VA PL + F W PL++ +Y EL+S WR +LD S +G
Sbjct: 408 SEFPHEYELYSLETVAIPTVLPLIQKYFVAWKPLEDKNYGCELISTWRDILDDSKNGRKM 467
Query: 166 --------------YAQLVSQAILPAVRASSISNWD-AKDPEPMLKFLDCWKMLLPYSLL 210
Y +++ + ILP++R + + WD + M++ ++ W LL +
Sbjct: 468 TFGHNKTKGDEIRAYDRIIWEGILPSIRRACLQ-WDPSTQMHEMIELVEQWIPLLSAWIT 526
Query: 211 NTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWLPWLGRKQKGLFRMILIKLGEVLDA 270
IL+ +V+PK+++ V+ WDP ++ IH+W+ WL LG + + + I KL + L
Sbjct: 527 ENILEQLVVPKIAERVNQWDPMTDEIPIHEWLVPWLVLLGDRIQTVMPPIRQKLSKALKL 586
Query: 271 WHPSDASAYILLSPWKNVLWEQ-----LMHRYIVPKLQVTVQELEINPANQKLYQFHWV- 324
W P D SA L PW+NV W + + IVPKL V + +E+NP Y W
Sbjct: 587 WDPMDRSALETLRPWQNV-WSAATFSAFIAQNIVPKLGVALDTMELNPTMNPEYP-EWTA 644
Query: 325 -MSW 327
M W
Sbjct: 645 CMEW 648
Score = 157 (60.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 64/258 (24%), Positives = 116/258 (44%)
Query: 142 NPSYQL-ELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNWDAKDPE-PMLKFLD 199
+PS Q+ E++ + Q + ++ ++ Q ++P + A ++ WD E P+ ++L
Sbjct: 502 DPSTQMHEMIELVEQWIPLLSAWIT-ENILEQLVVPKI-AERVNQWDPMTDEIPIHEWLV 559
Query: 200 CWKMLLPYSLLNTILDTIVMPKMSDVVDSWDP--RSETYSIHDWVHQWLPWLGRKQKGLF 257
W +LL + T++ I K+S + WDP RS ++ W + W +
Sbjct: 560 PWLVLLG-DRIQTVMPPI-RQKLSKALKLWDPMDRSALETLRPWQNVWSA--ATFSAFIA 615
Query: 258 RMILIKLGEVLDAW--HPSDASAYILLSPWKNVL-WEQLMHRYIVPKLQVTVQELEINPA 314
+ I+ KLG LD +P+ Y W + W + H P + P
Sbjct: 616 QNIVPKLGVALDTMELNPTMNPEY---PEWTACMEWLEFTH----PDAIANIVTKYFFP- 667
Query: 315 NQKLYQFHWVMSWASAIPSSPN-DFEEIRKWYKGWKDLLPQELV----ANESIR-AQLSI 368
+ Y + + W SP D+ E+++WY WK +PQ LV NE++R + ++I
Sbjct: 668 --RFY--NCLCLWLD----SPGVDYNEVKRWYGSWKARIPQVLVNYPTVNENLRRSMIAI 719
Query: 369 GVDMIGKAVDGVKIDPPA 386
G + G+ V G++ P A
Sbjct: 720 GRSLQGEKVGGLQATPIA 737
>POMBASE|SPAC1486.03c [details] [associations]
symbol:SPAC1486.03c "RNA-binding splicing factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISO] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 PomBase:SPAC1486.03c
GO:GO:0005737 EMBL:CU329670 GO:GO:0006355 GO:GO:0044732
GO:GO:0003677 GO:GO:0005681 GO:GO:0003723 GO:GO:0045292
GO:GO:0000390 KO:K13103 OrthoDB:EOG4K0TXN eggNOG:NOG312699
OMA:MPNQEID PIR:T50072 RefSeq:NP_594091.1
EnsemblFungi:SPAC1486.03c.1 GeneID:2542910 KEGG:spo:SPAC1486.03c
NextBio:20803948 Uniprot:Q9UTK6
Length = 797
Score = 197 (74.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/152 (25%), Positives = 81/152 (53%)
Query: 183 ISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPR---SETYSIH 239
+ W +D L+ L+ W ++P + ++++ ++P++ D V W+P+ + S+H
Sbjct: 446 LKKWIIQDSLKALQLLEAWDPVVPEKVKDSLIQDDILPRLKDAVSKWNPKLKLKKNDSLH 505
Query: 240 DWVHQWLPWLGRKQKGLFRMILIKLGEVLDAWHPSDASA---YILLSPWKNVLWEQLMHR 296
+ WLP+L + L + +L++ +L W + S + S + N ++L+ +
Sbjct: 506 HCIFPWLPYLEKHADSLLQSVLVQFSLILSPWKIKNGSIDDFSVWRSAFANDALDRLLEK 565
Query: 297 YIVPKLQVTV-QELEINPANQKLYQFHWVMSW 327
I+PKL+ + +EL I+P+NQ L F ++SW
Sbjct: 566 VILPKLEKLMDEELVIDPSNQDLEIFFIILSW 597
>ASPGD|ASPL0000028823 [details] [associations]
symbol:AN5578 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0044732 "mitotic spindle
pole body" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
EMBL:BN001305 EMBL:AACD01000096 KO:K13103 OrthoDB:EOG4K0TXN
eggNOG:NOG312699 RefSeq:XP_663182.1 EnsemblFungi:CADANIAT00003501
GeneID:2871870 KEGG:ani:AN5578.2 HOGENOM:HOG000191443 OMA:IARPSAF
Uniprot:Q5B1K2
Length = 778
Score = 192 (72.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 61/249 (24%), Positives = 110/249 (44%)
Query: 81 LDQIQKKNSLGTLT-LESLANDFSNLKCKVSHSYMIYHLSPVAYSLAFPLFIRTFQGWDP 139
L+ I ++NS L+ + + +L+ + Y L A + PLF + W+P
Sbjct: 297 LEVIPEENSDSPQAKLDYVTDQLESLEIQYRAEIDEYRLWETAVAAIHPLFREAMEDWEP 356
Query: 140 LQNPSYQLELVSMWRQVLD--SDHGYVY-------YAQLVSQAILPAVRASSISNWDAKD 190
L+ P++ + + + +L + G + Y ++ LP VR++ ++ WD +
Sbjct: 357 LKAPTFLVANLRRLQPILSRKASEGQLVQRSSTSPYETMIYTLWLPRVRSALLNEWDVFN 416
Query: 191 PEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHD--------WV 242
P P + WK LLP + +LD +V+PK++ ++SW P+ + S H W+
Sbjct: 417 PSPATTLIVSWKELLPPFVYANVLDQLVVPKLTSGLNSWKPKRSSSSSHSQQNSRVPWWL 476
Query: 243 HQWLPWLGR-----KQK-GLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVL---WEQL 293
WL +L KQ GL K VLD W S A W + L ++
Sbjct: 477 FTWLQYLDERHTNPKQATGLLSDAKRKFRRVLDTWDLS-AGPVPGFDLWHDALSSEFDTC 535
Query: 294 MHRYIVPKL 302
+ +++P+L
Sbjct: 536 LRNHLLPRL 544
>UNIPROTKB|G4ND86 [details] [associations]
symbol:MGG_00288 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005634
GO:GO:0006355 EMBL:CM001235 GO:GO:0003677 KO:K13103
InterPro:IPR022159 Pfam:PF12457 RefSeq:XP_003718808.1
EnsemblFungi:MGG_00288T0 GeneID:2674376 KEGG:mgr:MGG_00288
Uniprot:G4ND86
Length = 960
Score = 141 (54.7 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 161 HGYVYYAQLVSQAILPAVRASSISNWDAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMP 220
H Y ++ + LP V A ++ WD +D + +L W +LP + +L+ ++
Sbjct: 567 HNASPYETMIYKIWLPHV-ARAVRGWDVRDTDRLLNLWKTWLPVLPDFIRKQLLEQDIVR 625
Query: 221 KMSDVVDSWDPRSETYSIHDWVHQWL-PWLG---------RKQKGLFRMILIKLGEVLDA 270
K+ D V W+P+ H+ H W+ PWL + GL + K ++++A
Sbjct: 626 KLEDAVAKWEPKKRRMH-HNKPHMWIFPWLQYLPAHHLDPKSSSGLVADVKRKFRQLVEA 684
Query: 271 WHPSDASAYILLSPWKNVL--------WEQLMHRYIVPKL 302
W + L+ WK+VL W L +I+P++
Sbjct: 685 WE-FEQGVIPGLAAWKDVLRQSSQNDQWRPLAMGHILPRI 723
Score = 53 (23.7 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 121 VAYSLAFPLFIRTFQGWDPLQN 142
+A + P+F Q WDPL++
Sbjct: 505 IAIAALHPVFTEVLQSWDPLED 526
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 422 422 0.00083 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 629 (67 KB)
Total size of DFA: 319 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.26u 0.15s 35.41t Elapsed: 00:00:02
Total cpu time: 35.27u 0.15s 35.42t Elapsed: 00:00:02
Start: Fri May 10 09:08:45 2013 End: Fri May 10 09:08:47 2013