BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035815
(167 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 13 GYIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGI--NENLSLLEHAYELWKCG 70
G+I P+Y G S ++D+F + V+ L +ITG+ L + ++++ LL+ L K
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 71 KGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
K VD ++ + + +ALLC Q +P +RP EV ML+ +
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 13 GYIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGI--NENLSLLEHAYELWKCG 70
G+I P+Y G S ++D+F + V+ L +ITG+ L + ++++ LL+ L K
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 71 KGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
K VD ++ + + +ALLC Q +P +RP EV ML+ +
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 1 HTERVLVIFKCRGYIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLL 60
T V+ GYI P+Y +G + +SD++SF V+ ++ +S ++ E ++L
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253
Query: 61 EHAYELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E A E G+ + VD + D L + D A+ C+ + DRPS +V
Sbjct: 254 EWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 1 HTERVLVIFKCRGYIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLL 60
T V+ GYI P+Y +G + +SD++SF V+ ++ +S ++ E ++L
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253
Query: 61 EHAYELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E A E G+ + VD + D L + D A+ C+ + DRPS +V
Sbjct: 254 EWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + E SL E Y+ + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV---------------LWEITSLAEQPYQGLSNEQVL 242
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
+FV D D C R D+ +C Q NPN RP+ LE+ ++LK++
Sbjct: 243 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + E SL E Y+ + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV---------------LWEITSLAEQPYQGLSNEQVL 242
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
+FV D D C R D+ +C Q NPN RP+ LE+ ++LK++
Sbjct: 243 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + E SL E Y+ + +
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVV---------------LWEITSLAEQPYQGLSNEQVL 243
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
+FV D D C R D+ +C Q NPN RP+ LE+ ++LK++
Sbjct: 244 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + E SL E Y+ + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV---------------LWEITSLAEQPYQGLSNEQVL 242
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
+FV D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 243 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + E SL E Y+ + +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVV---------------LWEITSLAEQPYQGLSNEQVL 239
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
+FV D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 240 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + E SL E Y+ + +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVV---------------LWEITSLAEQPYQGLSNEQVL 241
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
+FV D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 242 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + E SL E Y+ + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV---------------LWEITSLAEQPYQGLSNEQVL 242
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
+FV D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 243 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + E SL E Y+ + +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV---------------LWEITSLAEQPYQGLSNEQVL 242
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
+FV D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 243 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 235
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV + D C M L++ +C Q NP RPS LE+ S +K E
Sbjct: 236 RFVMEGGLLDKPDNCPDML-LELMRMCWQYNPKMRPSFLEIISSIKEE 282
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 237
Query: 74 EFV-DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV + D C M L++ +C Q NP RPS LE+ S +K E
Sbjct: 238 RFVMEGGLLDKPDNCPDML-LELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 244
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 291
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 243
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 290
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 244
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 291
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 240
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 241 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 287
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 8 IFKCRGYIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINEN----LSLLEHA 63
I Y P+ RG + +SDI+SF V+ L +ITG L ++E+ L L
Sbjct: 186 IVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKE 239
Query: 64 YELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTN 123
+ +++D +D + T + +A C+ E N RP +V +L+ T +
Sbjct: 240 EIEDEEKTIEDYIDKKXNDADSTS-VEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 241
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 242 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 288
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 243
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 237
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 238 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 284
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 250
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 8 IFKCRGYIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINEN----LSLLEHA 63
I Y+ P+ RG + +SDI+SF V+ L +ITG L ++E+ L L
Sbjct: 189 IVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKE 242
Query: 64 YELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTN 123
+ +++D +D + T + +A C+ E N RP +V +L+ T +
Sbjct: 243 EIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 272
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 273 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 319
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 8 IFKCRGYIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINEN----LSLLEHA 63
I Y+ P+ RG + +SDI+SF V+ L +ITG L ++E+ L L
Sbjct: 195 IVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKE 248
Query: 64 YELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTN 123
+ +++D +D + T + +A C+ E N RP +V +L+ T +
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
++ P+ GV++T SD++SF V+ + T L E Y+ + +
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 250
Query: 74 EFV------DSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNE 120
FV D + + +LMR +C Q NP RPS LE+ S +K E
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEE 297
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 8 IFKCRGYIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINEN----LSLLEHA 63
I Y+ P+ RG + +SDI+SF V+ L +ITG L ++E+ L L
Sbjct: 195 IVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKE 248
Query: 64 YELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTN 123
+ +++D +D + T + +A C+ E N RP +V +L+ T +
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 22/116 (18%)
Query: 10 KCRGYIPPKYT-----HRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSL-LEHA 63
+ +G IP K+ +Y+T+SD++SF VL ++T G N + E
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-------LGGNPYPGIPPERL 261
Query: 64 YELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
+ L K G ME D+ ++ M RL L C ++ P+ RP ++S L+
Sbjct: 262 FNLLKTGHRMERPDNCSEE-------MYRL--MLQCWKQEPDKRPVFADISKDLEK 308
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 33.1 bits (74), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 22/116 (18%)
Query: 10 KCRGYIPPKYT-----HRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSL-LEHA 63
+ +G IP K+ +Y+T+SD++SF VL ++T G N + E
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-------LGGNPYPGIPPERL 261
Query: 64 YELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
+ L K G ME D+ ++ M RL L C ++ P+ RP ++S L+
Sbjct: 262 FNLLKTGHRMERPDNCSEE-------MYRL--MLQCWKQEPDKRPVFADISKDLEK 308
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 22/116 (18%)
Query: 10 KCRGYIPPKYT-----HRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSL-LEHA 63
+ +G IP K+ +Y+T+SD++SF VL ++T G N + E
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-------LGGNPYPGIPPERL 261
Query: 64 YELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
+ L K G ME D+ ++ M RL L C ++ P+ RP ++S L+
Sbjct: 262 FNLLKTGHRMERPDNCSEE-------MYRL--MLQCWKQEPDKRPVFADISKDLEK 308
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTNINSPKKP 130
E + +LMR LC +E P DRP+ + S+L++ T +P
Sbjct: 236 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTNINSPKKP 130
E + +LMR LC +E P DRP+ + S+L++ T +P
Sbjct: 236 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 243
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTNINSPKKP 130
E + +LMR LC +E P DRP+ + S+L++ T +P
Sbjct: 244 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 285
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 241
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTNINSPKKP 130
E + +LMR LC +E P DRP+ + S+L++ T +P
Sbjct: 242 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 283
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 245
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTNINSPKKP 130
E + +LMR LC +E P DRP+ + S+L++ T +P
Sbjct: 246 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 287
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
+S +SD+++F VL L I + GI+ L YEL + ME + +
Sbjct: 435 FSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKV- 487
Query: 85 FTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLK 118
+LMR C Q NP+DRPS E+ +
Sbjct: 488 --YELMR------ACWQWNPSDRPSFAEIHQAFE 513
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
+S +SD+++F VL L I + GI+ L YEL + ME + +
Sbjct: 396 FSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKV- 448
Query: 85 FTCKLMRRLDIALLCVQENPNDRPSTLEV 113
+LMR C Q NP+DRPS E+
Sbjct: 449 --YELMR------ACWQWNPSDRPSFAEI 469
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 244
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKNETTNINSPKKP 130
E + +LMR LC +E P DRP+ + S+L++ T +P
Sbjct: 245 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQFQP 286
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + +LMR LC +E P DRP+ + S+L++
Sbjct: 236 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLED 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 236
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + +LMR LC +E P DRP+ + S+L++
Sbjct: 237 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLED 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 237
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + +LMR LC +E P DRP+ + S+L++
Sbjct: 238 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLED 268
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 241
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + +LMR LC +E P DRP+ + S+L++
Sbjct: 242 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLED 272
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
+S +SD+++F VL L I + GI+ L YEL + ME + +
Sbjct: 393 FSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKV- 445
Query: 85 FTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLK 118
+LMR C Q NP+DRPS E+ +
Sbjct: 446 --YELMR------ACWQWNPSDRPSFAEIHQAFE 471
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 240
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + +LMR LC +E P DRP+ + S+L++
Sbjct: 241 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLED 271
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + +LMR LC +E P DRP+ + S+L++
Sbjct: 236 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLED 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 230
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + +LMR LC +E P DRP+ + S+L++
Sbjct: 231 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLED 261
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 232
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E + + +LMR C Q NP+DRPS E+
Sbjct: 233 ERPEGCPEKV---YELMR------ACWQWNPSDRPSFAEI 263
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 236
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E + + +LMR C Q NP+DRPS E+
Sbjct: 237 ERPEGCPEKV---YELMRA------CWQWNPSDRPSFAEI 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 236
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E + + +LMR C Q NP+DRPS E+
Sbjct: 237 ERPEGCPEKV---YELMRA------CWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
+S +SD+++F VL L I + GI+ L YEL + ME + +
Sbjct: 193 FSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKV- 245
Query: 85 FTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLK 118
+LMR C Q NP+DRPS E+ +
Sbjct: 246 --YELMRA------CWQWNPSDRPSFAEIHQAFE 271
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 233
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E + + +LMR C Q NP+DRPS E+
Sbjct: 234 ERPEGCPEKV---YELMR------ACWQWNPSDRPSFAEI 264
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 231
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + + +LMR C Q NP+DRPS E+ +
Sbjct: 232 ERPEGCPEKV---YELMRA------CWQWNPSDRPSFAEIHQAFET 268
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGIN-ENLSLLEHAYELWKCGKG 72
+ P+ + G ++ +SD++SF +L ++T + N E + LE Y + +
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 231
Query: 73 MEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + +LMR LC +E P DRP+ + S+L++
Sbjct: 232 PEEL----------YQLMR------LCWKERPEDRPTFDYLRSVLED 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 232
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E + + +LMR C Q NP+DRPS E+
Sbjct: 233 ERPEGCPEKV---YELMR------ACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 233
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E + + +LMR C Q NP+DRPS E+
Sbjct: 234 ERPEGCPEKV---YELMR------ACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 15/105 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 233
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLK 118
E + + +LMR C Q NP+DRPS E+ +
Sbjct: 234 ERPEGCPEKV---YELMR------ACWQWNPSDRPSFAEIHQAFE 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 231
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + + +LMR C Q NP+DRPS E+ +
Sbjct: 232 ERPEGCPEKV---YELMRA------CWQWNPSDRPSFAEIHQAFET 268
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 231
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + + +LMR C Q NP+DRPS E+ +
Sbjct: 232 ERPEGCPEKV---YELMR------ACWQWNPSDRPSFAEIHQAFET 268
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 236
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E + + +LMR C Q NP+DRPS E+
Sbjct: 237 ERPEGCPEKV---YELMR------ACWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
+S +SD+++F VL L I + GI+ L YEL + ME + +
Sbjct: 189 FSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKV- 241
Query: 85 FTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLK 118
+LMR C Q NP+DRPS E+ +
Sbjct: 242 --YELMRA------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
+S +SD+++F VL L I + GI+ L YEL + ME + +
Sbjct: 194 FSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKV- 246
Query: 85 FTCKLMRRLDIALLCVQENPNDRPSTLEV 113
+LMR C Q NP+DRPS E+
Sbjct: 247 --YELMRA------CWQWNPSDRPSFAEI 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 236
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E + + +LMR C Q NP+DRPS E+
Sbjct: 237 ERPEGCPEKV---YELMR------ACWQWNPSDRPSFAEI 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 231
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLKN 119
E + + +LMR C Q NP+DRPS E+ +
Sbjct: 232 ERPEGCPEKV---YELMR------ACWQWNPSDRPSFAEIHQAFET 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
+S +SD+++F VL L I + GI+ L YEL + ME + +
Sbjct: 189 FSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRMERPEGCPEKV- 241
Query: 85 FTCKLMRRLDIALLCVQENPNDRPSTLEVSSMLK 118
+LMR C Q NP+DRPS E+ +
Sbjct: 242 --YELMRA------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGM 73
+ P+ +S +SD+++F VL L I + GI+ L YEL + M
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVL-LWEIATYGMSPYPGID-----LSQVYELLEKDYRM 244
Query: 74 EFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV 113
E + + +LMR C Q NP+DRPS E+
Sbjct: 245 ERPEGCPEKV---YELMRA------CWQWNPSDRPSFAEI 275
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 14 YIPPKYTHRGVYSTESDIFSFEVLHLRMITGK 45
++ P+ R +Y+TE DI+S ++ + M+ G+
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
YS +SD+++F ++ ++TG+ L IN ++E G+G D S+ +N
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIE------MVGRGSLSPDLSKVRSN 253
Query: 85 FTCKLMRRLDIALLCVQENPNDRPS 109
K M+RL C+++ ++RPS
Sbjct: 254 -CPKRMKRL--MAECLKKKRDERPS 275
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
YS +SD+++F ++ ++TG+ L IN ++E G+G D S+ +N
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIE------MVGRGSLSPDLSKVRSN 241
Query: 85 FTCKLMRRLDIALLCVQENPNDRPS 109
K M+RL C+++ ++RPS
Sbjct: 242 -CPKRMKRL--MAECLKKKRDERPS 263
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
YS +SD+++F ++ ++TG+ L IN ++E G+G D S+ +N
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIE------MVGRGSLSPDLSKVRSN 253
Query: 85 FTCKLMRRLDIALLCVQENPNDRPS 109
K M+RL C+++ ++RPS
Sbjct: 254 -CPKRMKRL--MAECLKKKRDERPS 275
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 6 LVIFKCRGYIPPKYT-----HRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLL 60
+ + K G +P ++ + VY+T SD++S+ VL L I CG+ L
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL-LWEIVSLGGTPYCGMT-CAELY 241
Query: 61 EHAYELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV----SSM 116
E + ++ K + D D LMR+ C +E P +RPS ++ + M
Sbjct: 242 EKLPQGYRLEKPLNCDDEVYD-------LMRQ------CWREKPYERPSFAQILVSLNRM 288
Query: 117 LKNETTNINS 126
L+ T +N+
Sbjct: 289 LEERKTYVNT 298
>pdb|3BBN|E Chain E, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 308
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 10 KCRGYIPPKYTHRGVYSTESDI-FSFEVLHLRMITGKSLL 48
K GYIPP+ + +E +I ++E L+ +G+SLL
Sbjct: 83 KPEGYIPPRAVDEPPFESEEEIALAYEELYGAAYSGESLL 122
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 6 LVIFKCRGYIPPKYT-----HRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLL 60
+ + K G +P ++ + VY+T SD++S+ VL L I CG+ L
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL-LWEIVSLGGTPYCGMT-CAELY 251
Query: 61 EHAYELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV----SSM 116
E + ++ K + D D LMR+ C +E P +RPS ++ + M
Sbjct: 252 EKLPQGYRLEKPLNCDDEVYD-------LMRQ------CWREKPYERPSFAQILVSLNRM 298
Query: 117 LKNETTNINS 126
L+ T +N+
Sbjct: 299 LEERKTYVNT 308
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 6 LVIFKCRGYIPPKYT-----HRGVYSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLL 60
+ + K G +P ++ + VY+T SD++S+ VL L I CG+ L
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL-LWEIVSLGGTPYCGMT-CAELY 248
Query: 61 EHAYELWKCGKGMEFVDSSRDDTNFTCKLMRRLDIALLCVQENPNDRPSTLEV----SSM 116
E + ++ K + D D LMR+ C +E P +RPS ++ + M
Sbjct: 249 EKLPQGYRLEKPLNCDDEVYD-------LMRQ------CWREKPYERPSFAQILVSLNRM 295
Query: 117 LKNETTNINS 126
L+ T +N+
Sbjct: 296 LEERKTYVNT 305
>pdb|4FHR|A Chain A, Crystal Structure Of The Complex Between The Flagellar
Motor Proteins Flig And Flim
Length = 187
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 93 LDIALLCVQENPNDRPSTLEVSSMLKNETTNI 124
LDI + ENP +RP T +S+++ E TN+
Sbjct: 84 LDIIMGGPGENPPNRPPTEIETSIMRKEVTNM 115
>pdb|2HP7|A Chain A, Structure Of Flim Provides Insight Into Assembly Of The
Switch Complex In The Bacterial Flagella Motor
Length = 183
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 93 LDIALLCVQENPNDRPSTLEVSSMLKNETTNI 124
LDI + ENP +RP T +S+++ E TN+
Sbjct: 84 LDIIMGGPGENPPNRPPTEIETSIMRKEVTNM 115
>pdb|3SOH|A Chain A, Architecture Of The Flagellar Rotor
pdb|3SOH|C Chain C, Architecture Of The Flagellar Rotor
Length = 188
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 93 LDIALLCVQENPNDRPSTLEVSSMLKNETTNI 124
LDI + ENP +RP T +S+++ E TN+
Sbjct: 82 LDIIMGGPGENPPNRPPTEIETSIMRKEVTNM 113
>pdb|4GMS|L Chain L, Crystal Structure Of Heterosubtypic Fab S1391 IN COMPLEX
WITH Influenza A H3 Hemagglutinin
pdb|4GMS|M Chain M, Crystal Structure Of Heterosubtypic Fab S1391 IN COMPLEX
WITH Influenza A H3 Hemagglutinin
pdb|4GMS|N Chain N, Crystal Structure Of Heterosubtypic Fab S1391 IN COMPLEX
WITH Influenza A H3 Hemagglutinin
pdb|4GMT|L Chain L, Crystal Structure Of Heterosubtypic Fab S1391
pdb|4GMT|M Chain M, Crystal Structure Of Heterosubtypic Fab S1391
Length = 214
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 81 DDTNFTCKLMRRLDIALLCVQENPNDRPSTL 111
D + TCK + +D + QE P P TL
Sbjct: 17 DRVSVTCKASQNVDTNVAWYQEKPGQSPKTL 47
>pdb|4HE8|N Chain N, Crystal Structure Of The Membrane Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|4HE8|I Chain I, Crystal Structure Of The Membrane Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|4HEA|N Chain N, Crystal Structure Of The Entire Respiratory Complex I From
Thermus Thermophilus
pdb|4HEA|V Chain V, Crystal Structure Of The Entire Respiratory Complex I From
Thermus Thermophilus
Length = 427
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 37 LHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGME 74
+HL T LLML + E LSL +A W+ G+G+E
Sbjct: 95 MHLLASTRHLLLMLVAL-EALSLPLYALATWRRGQGLE 131
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
YS +SD+++F ++ ++TG+ L IN + ++ G+G D S+ +N
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI------IFMVGRGYLSPDLSKVRSN 239
Query: 85 FTCKLMRRLDIALLCVQENPNDRP 108
K M+RL C+++ ++RP
Sbjct: 240 -CPKAMKRLMAE--CLKKKRDERP 260
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
YS +SD+++F ++ ++TG+ L IN + ++ G+G D S+ +N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI------IFMVGRGYLSPDLSKVRSN 237
Query: 85 FTCKLMRRLDIALLCVQENPNDRP 108
K M+RL C+++ ++RP
Sbjct: 238 -CPKAMKRLMAE--CLKKKRDERP 258
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
YS +SD+++F ++ ++TG+ L IN + ++ G+G D S+ +N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI------IFMVGRGYLSPDLSKVRSN 237
Query: 85 FTCKLMRRLDIALLCVQENPNDRP 108
K M+RL C+++ ++RP
Sbjct: 238 -CPKAMKRLMAE--CLKKKRDERP 258
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
YS +SD+++F ++ ++TG+ L IN + ++ G+G D S+ +N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI------IFMVGRGYLSPDLSKVRSN 237
Query: 85 FTCKLMRRLDIALLCVQENPNDRP 108
K M+RL C+++ ++RP
Sbjct: 238 -CPKAMKRLMAE--CLKKKRDERP 258
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
YS +SD+++F ++ ++TG+ L IN + ++ G+G D S+ +N
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI------IFMVGRGYLSPDLSKVRSN 242
Query: 85 FTCKLMRRLDIALLCVQENPNDRP 108
K M+RL C+++ ++RP
Sbjct: 243 -CPKAMKRLMAE--CLKKKRDERP 263
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 25 YSTESDIFSFEVLHLRMITGKSLLMLCGINENLSLLEHAYELWKCGKGMEFVDSSRDDTN 84
YS +SD+++F ++ ++TG+ L IN + ++ G+G D S+ +N
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI------IFMVGRGYLSPDLSKVRSN 242
Query: 85 FTCKLMRRLDIALLCVQENPNDRP 108
K M+RL C+++ ++RP
Sbjct: 243 -CPKAMKRLMAE--CLKKKRDERP 263
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,696,890
Number of Sequences: 62578
Number of extensions: 169189
Number of successful extensions: 679
Number of sequences better than 100.0: 91
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 610
Number of HSP's gapped (non-prelim): 91
length of query: 167
length of database: 14,973,337
effective HSP length: 92
effective length of query: 75
effective length of database: 9,216,161
effective search space: 691212075
effective search space used: 691212075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)