BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035817
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 72 DAFIPYLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFL--G 129
D + YLA+N DRF+S +P + I L SC++L+ KMR SV + G
Sbjct: 74 DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISL---SCVSLSAKMRKPDMSVSDLPVEG 130
Query: 130 KWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIG-------KGIERRTLNE 182
++ D ++ +ME IL LKW+MR+VTP + FF+ + + K + ++
Sbjct: 131 EF-FDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSD 189
Query: 183 IIIQTQDNISFTRFRPSVIAASAVLTA 209
+ Q +ISF F+PSVIA +A+L A
Sbjct: 190 LTFSLQHDISFLEFKPSVIAGAALLFA 216
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 23/146 (15%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSV--------PEFLG 129
LAMN DRF+S H LP+ + + L A +CL+LA K+ + + P+F+
Sbjct: 101 LAMNYLDRFLSVHDLPSGKGWI---LQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFV- 156
Query: 130 KWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMI------PIGKGIERRTLNEI 183
+ + +MEL +L LKW++RA+TP +R+F+ + P I R ++
Sbjct: 157 ---FEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSL--QV 211
Query: 184 IIQTQDNISFTRFRPSVIAASAVLTA 209
I T I F FRPS +AA+ L+
Sbjct: 212 IASTTKGIDFLEFRPSEVAAAVALSV 237
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 19/150 (12%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLG------KW 131
LAMN DRF+S H LP+ + L A +CL+LA K+ + + VPE + +
Sbjct: 92 LAMNYLDRFLSVHDLPSGKAWT---VQLLAVACLSLAAKIEETN--VPELMQLQVGAPMF 146
Query: 132 NLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMI------PIGKGIERRTLNEIII 185
+ + +MEL +L L+W++RAVTP VR+F+ I P + + R ++I
Sbjct: 147 VFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSL--QVIA 204
Query: 186 QTQDNISFTRFRPSVIAASAVLTACRLLYD 215
T I F FR S IAA+ L+ +D
Sbjct: 205 STTKGIDFLEFRASEIAAAVALSVSGEHFD 234
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 20/148 (13%)
Query: 74 FIPYLAMNIFDRFISRHQLPTVLDH--VRDDIVLAANSCLTLAWKMRDNS--------FS 123
YLA+N DRF+S + D ++ +++A CL+LA KM + +
Sbjct: 123 LCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVA---CLSLAAKMEETAAPGTLDLQVC 179
Query: 124 VPEFLGKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLN-- 181
PE++ D + + +ME+ +L LKW+M+AVTP + F++ I G I ++
Sbjct: 180 NPEYV----FDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRC 235
Query: 182 -EIIIQTQDNISFTRFRPSVIAASAVLT 208
EII+ T F RFRPS IA + L+
Sbjct: 236 TEIILSTMKATVFLRFRPSEIATAVALS 263
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 18/142 (12%)
Query: 71 LDAFIPYLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMR--------DNSF 122
+ YLA+N DRF+S+++LP D + + +A CL++A KM D
Sbjct: 126 FSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVA---CLSIAAKMEETVVPQCLDLQI 182
Query: 123 SVPEFLGKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTL-- 180
P FL + + + +MEL +L L W+M+AVTP + +F+ + G R L
Sbjct: 183 GEPRFL----FEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLR 238
Query: 181 -NEIIIQTQDNISFTRFRPSVI 201
+E+I++ F FRPS I
Sbjct: 239 SSELILRIAAGTGFLEFRPSEI 260
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Query: 67 KSDKLDAFIP---YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFS 123
K + + F+P YLA+N DRF+S LP + L A +CL+LA KM +
Sbjct: 91 KVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWA---MQLLAVACLSLAAKMEETL-- 145
Query: 124 VPEFL------GKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIER 177
VP L ++ + + +ME IL L W++R+VTP + FF +
Sbjct: 146 VPSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFA---------CK 196
Query: 178 RTLNEIIIQTQDNISFTRFRPSVIAASAVLTA 209
N ++ +I F PS +AA+AVL A
Sbjct: 197 HISNAMVQNANSDIQFLDHCPSSMAAAAVLCA 228
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 15/142 (10%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFL------GK 130
YLA++ DRF+S H+LP ++ L A +CL+LA KM + VP L +
Sbjct: 138 YLAVSYMDRFLSLHRLPGNGWAMQ----LLAVTCLSLAAKMEETL--VPSILDLQMEDAR 191
Query: 131 WNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMI-PIGKGIER--RTLNEIIIQT 187
+ + + +MEL +L L W++R++TP + F + + P GK I ++ + T
Sbjct: 192 YIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRELIHQATQVTLAT 251
Query: 188 QDNISFTRFRPSVIAASAVLTA 209
+ F PS IAA+AVL A
Sbjct: 252 IHDTEFLDHCPSSIAAAAVLCA 273
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 21/234 (8%)
Query: 70 KLDAFIPYLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFL- 128
K L++N DRF+S LP + L A + L+LA KM + P L
Sbjct: 105 KFGPLTAVLSVNYLDRFLSVFDLPQEEACMTQ---LLAVASLSLAAKMEETVVPHPLDLQ 161
Query: 129 ---GKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMI-----PIGKGIERRTL 180
K+ + + +MEL +L LKW+M+AVT + +++ P + R
Sbjct: 162 VCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSV- 220
Query: 181 NEIIIQTQDNISFTRFRPSVIAASAVLTACRLLYDDIYEENKKILLSRKYVEEEDLETCL 240
++I+ T F FRPS IAAS L A ++E ++ K +++E + C
Sbjct: 221 -DLILSTCKVAEFLVFRPSEIAASVALVALEEHETSMFE---RVATCYKNLKKERVLRCY 276
Query: 241 DETYEKCIEKKILLLRDVWFVEKPKLEIG----AAEIAKAGETSSSGSHRSGKE 290
+ +K I + I+ PK IG AA I++ E + GS + E
Sbjct: 277 EMIQDKIIMRNIMRQSAGSVFSIPKSPIGVLDAAACISQQSEDTFVGSPATNYE 330
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLG------K 130
YLA+N DRF+ +LP + L A +CL+LA KM + VP K
Sbjct: 104 YLAVNYMDRFLYARRLPETSGW---PMQLLAVACLSLAAKMEE--ILVPSLFDFQVAGVK 158
Query: 131 WNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMI-PIGK--GIERRTLNEIIIQT 187
+ + + +MEL +L L W++R+VTP + FF I P G G EII+
Sbjct: 159 YLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSN 218
Query: 188 QDNISFTRFRPSVIAASAVL 207
SF + PS IAA+A+L
Sbjct: 219 IKEASFLEYWPSSIAAAAIL 238
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLG------KW 131
LA+N DRF+S +QLP D + L A +CL+LA KM + VP+ L ++
Sbjct: 126 LAVNYLDRFLSLYQLPDGKDWMTQ---LLAVACLSLAAKMEETD--VPQSLDLQVGEERY 180
Query: 132 NLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTL---NEIIIQTQ 188
+ + +MEL +L LKW+M+AVTP V +F+ + G R+ +E+I+
Sbjct: 181 VFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSALLSSELILCIA 240
Query: 189 DNISFTRFRPSVI 201
FRPS I
Sbjct: 241 RGTECLGFRPSEI 253
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 15/242 (6%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE----FLGKWN 132
YLA+N DRF+S LP ++ L + SCL+LA KM + +P F ++
Sbjct: 117 YLAVNYLDRFLSSFNLPHDESWMQQ---LLSVSCLSLATKMEETVVPLPMDLQVFDAEYV 173
Query: 133 LDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTL----NEIIIQTQ 188
+ + +MEL +++ LKW+++AVTP + +F++ GK TL +++ + T
Sbjct: 174 FEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKP-PSYTLASWCSDLTVGTL 232
Query: 189 DNISFTRFRPSVIAASAVLTACRLLYDDIYEENKKILLSRKYVEEEDLETCLDETYEKCI 248
+ F FRPS IAA+ VL L + N + S V +E + C + EK +
Sbjct: 233 KDSRFLSFRPSEIAAAVVLAV--LAENQFLVFNSALGESEIPVNKEMVMRCYELMVEKAL 290
Query: 249 EKKILLLRDVWFV-EKPKLEIGAAEIAKAGETSSSGSHRSGKEPIQEQNQDEAEGDIDQE 307
KKI V P + AA + + ++ GS +S +QD A +
Sbjct: 291 VKKIRNSNASSSVPHSPITVLDAACFSFRSDDTTLGSSQSNSNNKDYNSQDSAPASKRRR 350
Query: 308 MN 309
+N
Sbjct: 351 LN 352
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 15/172 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLG------KW 131
L+MN DRF++ ++LP D L A SCL+LA KM + VP + K+
Sbjct: 120 LSMNYLDRFLTSYELPKDKDWAAQ---LLAVSCLSLASKMEETD--VPHIVDLQVEDPKF 174
Query: 132 NLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIP--IGKGIERRTLNEIIIQTQD 189
+ + +MEL ++ L W+++A+TP + +FV+ I + + + R+ + I+ T
Sbjct: 175 VFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGHVSENLIYRS-SRFILNTTK 233
Query: 190 NISFTRFRPSVIAASAVLTACRLLYDDIYEENKKILLSRKYVEEEDLETCLD 241
I F FRPS IAA+A ++ + +E +K L S YV++E ++ CL+
Sbjct: 234 AIEFLDFRPSEIAAAAAVSVSISGETECIDE-EKALSSLIYVKQERVKRCLN 284
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKW---NLD 134
LAMN DRF+S PT + + L +C+ LA KM++ E L + ++
Sbjct: 80 LAMNYLDRFLSVE--PTK----KTRLQLLGATCMFLASKMKETVPLTAEKLCIYTDNSVR 133
Query: 135 KDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPI---GKGIERRTLNEIIIQTQDNI 191
+L+MEL L LKW + +VTP + F+ +PI K I R+ + ++
Sbjct: 134 PGELLQMELLALNKLKWDLASVTPHDFIEHFLAKLPIHQSSKQILRKHAQTFVALCATDV 193
Query: 192 SFTRFRPSVIAASAVLTACRLLY 214
+F PS+IAA +V A + LY
Sbjct: 194 NFIASPPSMIAAGSVAAAVQGLY 216
>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
Length = 292
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKW---NLD 134
LAMN DRF+S L + + L +C+ +A KM++ E L + ++
Sbjct: 80 LAMNYLDRFLSFEPLK------KSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIR 133
Query: 135 KDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIG---KGIERRTLNEIIIQTQDNI 191
D +L+MEL ++ LKW + A+TP + F+ +P+ K I R+ + ++
Sbjct: 134 PDELLQMELLLVNKLKWNLAAMTPHDFIEHFLTKMPLAEDTKQIIRKHAQTFVALCATDV 193
Query: 192 SFTRFRPSVIAASAVLTACRLLY 214
F PS+IAA +V+ A + L+
Sbjct: 194 KFISNPPSMIAAGSVVAAVQGLH 216
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 67 KSDKLDAFIP---YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFS 123
K + F P YLA++ DRF+S LP DH +L +CL+LA KM ++S
Sbjct: 134 KVRSVHGFQPATAYLAVSYMDRFMSSRSLP---DHGWASQLLCV-ACLSLAAKMEESS-- 187
Query: 124 VPEFL------GKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIER 177
P L ++ + + +MEL +L L W++R+VTP V FF + G
Sbjct: 188 APPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVG-SSGRSS 246
Query: 178 RTLN----EIIIQTQDNISFTRFRPSVIAASAVLTA 209
R L +II+ + F S +AA+AVL A
Sbjct: 247 RILALRACQIILSAIHELEFLNHCASSMAAAAVLFA 282
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 75 IPYLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKM-RDNSFSVPEFLG--KW 131
+ YLA+N DR++S+ QL + ++ A SCLTLA KM R + S + ++
Sbjct: 78 VAYLALNYVDRYLSKRQLACERNPWAPRLL--AISCLTLAAKMQRAAAISAADIQRGEEF 135
Query: 132 NLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMI-------PIGKGIERRTLNEII 184
D+ + +ME +L L+W+ R+VTP+ + FF+ + I+ R ++ ++
Sbjct: 136 MFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVD-LL 194
Query: 185 IQTQDNISFTRFRPSV 200
++ Q + F PSV
Sbjct: 195 LRVQPEVKMAEFSPSV 210
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKW---NLD 134
LAMN DRF+S L + + L +C+ LA KM++ E L + ++
Sbjct: 78 LAMNYLDRFLSVEPLR------KSWLQLLGATCMFLASKMKETIPLTAEKLCIYTDNSIR 131
Query: 135 KDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPI---GKGIERRTLNEIIIQTQDNI 191
D +L MEL++L LKW + +VTP + F+ +P+ K I R+ + ++
Sbjct: 132 PDELLIMELRVLNKLKWDLASVTPHDFIEHFLNKMPLTEDTKQIIRKHAQTFVALCATDV 191
Query: 192 SFTRFRPSVIAASAVLTA 209
+F PS+IAA +V A
Sbjct: 192 NFISNPPSMIAAGSVAAA 209
>sp|Q0D9C7|CCB22_ORYSJ Cyclin-B2-2 OS=Oryza sativa subsp. japonica GN=CYCB2-2 PE=1 SV=1
Length = 419
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE---FLGKWNL 133
+L +NI DRF++R + VR + L + + LA K + S V E +
Sbjct: 217 FLTVNIIDRFLARENV------VRKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRAY 270
Query: 134 DKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLNEIIIQTQDNISF 193
+ +L+ME I+ L++ M TP C +R F++ K +E + II +
Sbjct: 271 TRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKKLELMSFF-IIELSLVEYEM 329
Query: 194 TRFRPSVIAASAVLTACRLLYDDIYEENKKILLSRKYVEEEDLE 237
+F+PS++AA+A+ TA + + NK L KY EE+ +E
Sbjct: 330 LKFQPSMLAAAAIYTA-QCTINGFKSWNKCCELHTKYSEEQLME 372
>sp|A2YH60|CCB22_ORYSI Cyclin-B2-2 OS=Oryza sativa subsp. indica GN=CYCB2-2 PE=1 SV=2
Length = 419
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE---FLGKWNL 133
+L +NI DRF++R + VR + L + + LA K + S V E +
Sbjct: 217 FLTVNIIDRFLARENV------VRKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRAY 270
Query: 134 DKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLNEIIIQTQDNISF 193
+ +L+ME I+ L++ M TP C +R F++ K +E + II +
Sbjct: 271 TRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKKLELMSFF-IIELSLVEYEM 329
Query: 194 TRFRPSVIAASAVLTACRLLYDDIYEENKKILLSRKYVEEEDLE 237
+F+PS++AA+A+ TA + + NK L KY EE+ +E
Sbjct: 330 LKFQPSMLAAAAIYTA-QCTINGFKSWNKCCELHTKYSEEQLME 372
>sp|P49706|CCND2_CHICK G1/S-specific cyclin-D2 OS=Gallus gallus GN=CCND2 PE=3 SV=1
Length = 291
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKW---NLD 134
LAMN DRF++ +PT H++ L C+ LA K+++ E L + ++
Sbjct: 79 LAMNYLDRFLA--VVPTRKCHLQ----LLGAVCMFLASKLKETIPLTAEKLCIYTDNSIK 132
Query: 135 KDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKG---IERRTLNEIIIQTQDNI 191
+L+ EL +L LKW + AVTP + + +P+ K + R+ I +
Sbjct: 133 PQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKDKLVLIRKHAQTFIALCATDF 192
Query: 192 SFTRFRPSVIAASAVLTA-CRLLYDD 216
+F + PS+IA +V A C L DD
Sbjct: 193 NFAMYPPSMIATGSVGAAICGLQLDD 218
>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN=CCND2 PE=1 SV=1
Length = 289
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKW---NLD 134
LAMN DRF++ +PT H++ L C+ LA K+++ S E L + ++
Sbjct: 79 LAMNYLDRFLA--GVPTPKSHLQ----LLGAVCMFLASKLKETSPLTAEKLCIYTDNSIK 132
Query: 135 KDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGK---GIERRTLNEIIIQTQDNI 191
+L+ EL +L LKW + AVTP + + +P + + R+ I +
Sbjct: 133 PQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDF 192
Query: 192 SFTRFRPSVIAASAVLTA-CRLLYDD 216
F + PS+IA +V A C L D+
Sbjct: 193 KFAMYPPSMIATGSVGAAICGLQQDE 218
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDD---IVLAANSCLTLAWKMRDNS------FSVPEFL 128
LA+ D+FI + L RD + L + +CL+LA K+ + F V E
Sbjct: 110 LAITYLDKFICSYSLQ------RDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEE-- 161
Query: 129 GKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLNE---III 185
K+ + + +MEL IL L+W+M +TPI V + + + LN+ +++
Sbjct: 162 TKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLL 221
Query: 186 QTQDNISFTRFRPSVIAASAVLTACRLL--YDDI-YEENKKILLSRKYVEEEDLETCLD 241
+ F + PSV+AA+ ++ + +D + Y+ N LL + +E ++TC D
Sbjct: 222 SVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTN---LLGVLNLTKEKVKTCYD 277
>sp|P30280|CCND2_MOUSE G1/S-specific cyclin-D2 OS=Mus musculus GN=Ccnd2 PE=2 SV=1
Length = 289
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKW---NLD 134
LAMN DRF++ +PT H++ L C+ LA K+++ E L + ++
Sbjct: 78 LAMNYLDRFLAG--VPTPKTHLQ----LLGAVCMFLASKLKETIPLTAEKLCIYTDNSVK 131
Query: 135 KDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGK---GIERRTLNEIIIQTQDNI 191
+L+ EL +L LKW + AVTP + + +P K + R+ I +
Sbjct: 132 PQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDF 191
Query: 192 SFTRFRPSVIAASAVLTA-CRLLYDD 216
F + PS+IA +V A C L DD
Sbjct: 192 KFAMYPPSMIATGSVGAAICGLQQDD 217
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 71 LDAFIPYLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFL-- 128
++ LA+N FDRFI+ + T + L A +CL+LA K+ + VP L
Sbjct: 102 FNSLTALLAVNYFDRFITSRKFQTDKPWMSQ---LTALACLSLAAKVEE--IRVPFLLDF 156
Query: 129 ----GKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLN--- 181
++ + + +MEL +L L W+M VTPI + + L+
Sbjct: 157 QVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQLEFLSRCE 216
Query: 182 EIIIQTQDNISFTRFRPSVIAASAVLTACRLLY---DDIYEENKKILLSRKYVEEEDLET 238
+++ + F F PSV+A + +++ R L + +Y+ LL V+ E +
Sbjct: 217 SLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVYQSQLMTLLK---VDSEKVNK 273
Query: 239 CLDETYEKCIEKKILLLRDVWFVEKPKLEIGA 270
C + + KK R + ++++P IG
Sbjct: 274 CYELVLDHSPSKK----RMMNWMQQPASPIGV 301
>sp|Q04827|CCND2_RAT G1/S-specific cyclin-D2 OS=Rattus norvegicus GN=Ccnd2 PE=2 SV=1
Length = 288
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKW---NLD 134
LAMN DRF++ +PT H++ L C+ LA K+++ E L + ++
Sbjct: 78 LAMNYLDRFLAG--VPTPKTHLQ----LLGAVCMFLASKLKETIPLTAEKLCIYTDNSVK 131
Query: 135 KDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGK---GIERRTLNEIIIQTQDNI 191
+L+ EL +L LKW + AVTP + + +P K + R+ I +
Sbjct: 132 PQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDF 191
Query: 192 SFTRFRPSVIAASAVLTA-CRLLYDD 216
F + PS+IA +V A C L D+
Sbjct: 192 KFAMYPPSMIATGSVGAAICGLQQDE 217
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE---FLGKWNL 133
+L +NI DRF+ + +P R + L + + LA K + + V E +
Sbjct: 209 FLTVNIVDRFLEKQVVP------RKKLQLVGVTAMLLACKYEEVAVPVVEDLVLISDRAY 262
Query: 134 DKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLNEIIIQ-TQDNIS 192
K +L+ME IL L++ M TP +R F++ K ++ L+ I++ +
Sbjct: 263 TKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQ--LLSFFILELSLVEYQ 320
Query: 193 FTRFRPSVIAASAVLTA-CRLLYDDIYEENKKILLSRKYVEEEDLE 237
++RPS++AA+AV TA C L + K L +Y E+ LE
Sbjct: 321 MLKYRPSLLAAAAVYTAQCALTR--CQQWTKTCELHSRYTGEQLLE 364
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE---FLGKWNL 133
+L +NI DRF+ + +P R + L + + LA K + + V E +
Sbjct: 209 FLTVNIVDRFLEKQVVP------RKKLQLVGVTAMLLACKYEEVAVPVVEDLVLISDRAY 262
Query: 134 DKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLNEIIIQ-TQDNIS 192
K +L+ME IL L++ M TP +R F++ K ++ L+ I++ +
Sbjct: 263 TKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQ--LLSFFILELSLVEYQ 320
Query: 193 FTRFRPSVIAASAVLTA-CRLLYDDIYEENKKILLSRKYVEEEDLE 237
++RPS++AA+AV TA C L + K L +Y E+ LE
Sbjct: 321 MLKYRPSLLAAAAVYTAQCAL--TRCQQWTKTCELHSRYTGEQLLE 364
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRD-DIVLAANSCLTLAWKMRDNSF-SVPEFLGKWNL- 133
Y+A+ DRF++R +D ++ + L + +CL+LA K+ + +PEF K ++
Sbjct: 122 YVAVTYLDRFLARR----CVDRDKEWALQLLSVACLSLAAKVEERRPPRLPEF--KLDMY 175
Query: 134 DKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIG--KGIERRTLNEIIIQTQDNI 191
D +++MEL +L LKWQM TP + F K I R + E I + I
Sbjct: 176 DCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKFRHDERKAIVLRAI-ECIFASIKVI 234
Query: 192 SFTRFRPSVIAASAVLTA 209
S ++PS IA +A+L A
Sbjct: 235 SSVGYQPSTIALAAILIA 252
>sp|Q2KI22|CCND1_BOVIN G1/S-specific cyclin-D1 OS=Bos taurus GN=CCND1 PE=2 SV=1
Length = 295
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDD-IVLAANSCLTLAWKMRDNSFSVPEFLGKW---NL 133
LAMN DRF+S L+ V+ + L +C+ +A KM++ E L + ++
Sbjct: 80 LAMNYLDRFLS-------LEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSI 132
Query: 134 DKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIG---KGIERRTLNEIIIQTQDN 190
D +L MEL ++ LKW + A+TP + F+ +P+ K I R+ + +
Sbjct: 133 RPDELLHMELVLVNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQIIRKHAQTFVALCATD 192
Query: 191 ISFTRFRPSV 200
+ F PS+
Sbjct: 193 VKFISNPPSM 202
>sp|Q147G5|CCA22_ARATH Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=2 SV=1
Length = 436
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE---FLGKWNL 133
YL +N+ DRF+S + R + L SC+ +A K + S E F+
Sbjct: 228 YLTVNLIDRFLSNSYIE------RQRLQLLGVSCMLIASKYEELSAPGVEEFCFITANTY 281
Query: 134 DKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKG---IERRTLNEIIIQ-TQD 189
+ +L ME+QIL + +++ T +R F++ IE L + + T
Sbjct: 282 TRPEVLSMEIQILNFVHFRLSVPTTKTFLRRFIKAAQASYKVPFIELEYLANYLAELTLV 341
Query: 190 NISFTRFRPSVIAASAVLTA 209
SF RF PS+IAASAV A
Sbjct: 342 EYSFLRFLPSLIAASAVFLA 361
>sp|Q64HP0|CCND1_CANFA G1/S-specific cyclin-D1 OS=Canis familiaris GN=CCND1 PE=2 SV=1
Length = 295
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDD-IVLAANSCLTLAWKMRDNSFSVPEFLGKW---NL 133
LAMN +RF+S L+ V+ + L +C+ +A KM++ E L + ++
Sbjct: 80 LAMNYLNRFLS-------LEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSI 132
Query: 134 DKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIG---KGIERRTLNEIIIQTQDN 190
D +L+MEL ++ LKW + A+TP + F+ +P+ K I R+ + +
Sbjct: 133 RPDELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQIIRKHAQTFVALCATD 192
Query: 191 ISFTRFRPSV 200
+ F PS+
Sbjct: 193 VKFISNPPSM 202
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKWNLDKD 136
Y+A++ FD F+ + + D + L + +CL+LA KM + VP L ++ D D
Sbjct: 94 YIAISYFDLFLHKRFIGLQKDETWA-MRLLSVACLSLAAKMEERI--VPG-LSQYPQDHD 149
Query: 137 LMLK------MELQILRGLKWQMRAVTPICLVRFFVEMI-----PIGKGIERRTLNEIII 185
+ K EL IL L W+M +TP +F+ I + K + ++ ++
Sbjct: 150 FVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLL 209
Query: 186 QTQDNISFTRFRPSVIAA 203
ISFT +R V+AA
Sbjct: 210 ALTKEISFTEYRQFVVAA 227
>sp|Q2QQ96|CCA21_ORYSJ Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=1
Length = 490
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE-----FLGKW 131
YL +N+ DRF+S+H + R + L + + +A K + P F+
Sbjct: 283 YLTINLIDRFLSQHYIE------RQKLQLLGITSMLIASKYEE--ICAPRVEEFCFITDN 334
Query: 132 NLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTL----NEIIIQT 187
K +LKME +L + + + T +R F+ + + TL N + T
Sbjct: 335 TYTKAEVLKMEGLVLNDMGFHLSVPTTKTFLRRFLRAAQASRNVPSITLGYLANYLAELT 394
Query: 188 QDNISFTRFRPSVIAASAVLTA 209
+ SF +F PSV+AASAV A
Sbjct: 395 LIDYSFLKFLPSVVAASAVFLA 416
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFL------GKW 131
LA+N FDRF++ +L T + L A + L+LA K+ + VP L ++
Sbjct: 119 LAVNYFDRFMTSIKLQTDKPWMSQ---LVAVASLSLAAKVEE--IQVPLLLDLQVEEARY 173
Query: 132 NLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMI-PIGKGIER-----RTLNEIII 185
+ + +MEL IL L+W+M VTPI FF +I G + R ++I
Sbjct: 174 LFEAKTIQRMELLILSTLQWRMHPVTPI---SFFDHIIRRFGSKWHQQLDFCRKCERLLI 230
Query: 186 QTQDNISFTRFRPSVIAASAVL 207
+ F R+ PSV+A + ++
Sbjct: 231 SVIADTRFMRYFPSVLATAIMI 252
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKW---NLD 134
LA+N DRF++ +PT H++ L C+ LA K+++ E L + ++
Sbjct: 79 LAINYLDRFLAG--VPTPKTHLQ----LLGAVCMFLASKLKETIPLTAEKLCIYTDNSIK 132
Query: 135 KDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGK---GIERRTLNEIIIQTQDNI 191
+L+ EL +L LKW + AVTP + + +P + R+ I +
Sbjct: 133 PQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPSEKLSLIRKHAQTFIALCATDF 192
Query: 192 SFTRFRPSVIAASAVLTA-CRLLYDD 216
F + PS+IA +V A C L D+
Sbjct: 193 KFAMYPPSMIATGSVGAAICGLQQDE 218
>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
Length = 288
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKW---NLD 134
LA+N DRF++ +PT H++ L C+ LA K+++ E L + ++
Sbjct: 79 LAINYLDRFLAG--VPTPKTHLQ----LLGAVCMFLASKLKETIPLTAEKLCIYTDNSIK 132
Query: 135 KDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGK---GIERRTLNEIIIQTQDNI 191
+L+ EL +L LKW + AVTP + + +P + R+ I +
Sbjct: 133 PQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPNEKLSLIRKHAQTFIALCATDF 192
Query: 192 SFTRFRPSVIAASAVLTA-CRLLYDD 216
F + PS+IA +V A C L D+
Sbjct: 193 KFAMYPPSMIATGSVGAAICGLQQDE 218
>sp|P25012|CCNB2_SOYBN G2/mitotic-specific cyclin S13-7 (Fragment) OS=Glycine max PE=2
SV=1
Length = 257
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLA------WKMRDNSFSVPEFLGK 130
YL +NI DRF++ +P R ++ L S + +A W N F L
Sbjct: 52 YLTINIIDRFLAVKTVP------RRELQLVGISAMLMASKYEEIWPPEVNDFVC---LSD 102
Query: 131 WNLDKDLMLKMELQILRGLKWQMRAVTP-ICLVRFFVEMIPIGKGIERRT--LNEIIIQT 187
+ +L ME IL L+W + TP + LVRF +P + +E ++E+ +
Sbjct: 103 RAYTHEQILAMEKTILNKLEWTLTVPTPFVFLVRFIKAAVP-DQELENMAHFMSELGMM- 160
Query: 188 QDNISFTRFRPSVIAASAVLTA-CRLLYDDIYEENKKILLSRKYVEEE 234
N + + PS++AASAV A C L ++ E K L Y +E+
Sbjct: 161 --NYATLMYCPSMVAASAVFAARCTLNKAPLWNETLK--LHTGYSQEQ 204
>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
Length = 443
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 63 VQNSKSDKLDAFIPYLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSF 122
V+ S+ KL + YL +N+ DRF+S + + + + L +C+ +A K +
Sbjct: 221 VEVSEEYKLVSDTLYLTVNLIDRFMSHNYIE------KQKLQLLGITCMLIASKYEE--I 272
Query: 123 SVPE-----FLGKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFV------EMIPI 171
S P F+ + +L ME+++L L +++ T +R F+ + +P+
Sbjct: 273 SAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVPL 332
Query: 172 GKGIERRTLNEIIIQ-TQDNISFTRFRPSVIAASAVLTA 209
IE L + T +F RF PS+IAASAV A
Sbjct: 333 ---IEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLA 368
>sp|P25011|CCNB1_SOYBN G2/mitotic-specific cyclin S13-6 OS=Glycine max PE=2 SV=1
Length = 454
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLA------WKMRDNSFSVPEFLGK 130
YL +NI DRF++ +P R ++ L S + +A W N F L
Sbjct: 248 YLTINIIDRFLAVKTVP------RRELQLVGISAMLMASKYEEIWPPEVNDFVC---LSD 298
Query: 131 WNLDKDLMLKMELQILRGLKWQMRAVTPIC-LVRFFVEMIPIGKGIERRT--LNEIIIQT 187
+ +L ME IL L+W + TP+ LVRF +P + ++ L+E+ +
Sbjct: 299 RAYTHEHILTMEKTILNKLEWTLTVPTPLVFLVRFIKASVP-DQELDNMAHFLSELGMM- 356
Query: 188 QDNISFTRFRPSVIAASAVLTA-CRLLYDDIYEENKKILLSRKYVEEE 234
N + + PS++AASAVL A C L + E K L Y +E+
Sbjct: 357 --NYATLMYCPSMVAASAVLAARCTLNKAPFWNETLK--LHTGYSQEQ 400
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 23/197 (11%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE-----FLGKW 131
YLA+N DR+++ + + + ++ L +C+ +A K + VP+ ++
Sbjct: 234 YLAVNYVDRYLTGNAIN------KQNLQLLGVTCMMIAAKYEE--VCVPQVEDFCYITDN 285
Query: 132 NLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLNEIIIQTQDNI 191
++ +L+ME +L LK+++ T C +R F+ G+ L+E + +
Sbjct: 286 TYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQ-GRKEVPSLLSECLACYLTEL 344
Query: 192 SFT-----RFRPSVIAASAVLTACRLLYDDIYEENKKILLSRKYVEEEDLETCLDETYEK 246
S R+ PS++AASAV A L+ N + Y + +E C+ +
Sbjct: 345 SLLDYAMLRYAPSLVAASAVFLAQYTLHPSRKPWNATLEHYTSY-RAKHMEACVKNLLQL 403
Query: 247 CIEKKILLLRDVWFVEK 263
C EK L DV + K
Sbjct: 404 CNEK---LSSDVVAIRK 417
>sp|P24869|CG22_YEAST G2/mitotic-specific cyclin-2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB2 PE=1 SV=1
Length = 491
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRD-NSFSVPEFLGKWN--L 133
YLA+NI DRF+ + + D + L SCL +A K + S S+ F + +
Sbjct: 283 YLAINIMDRFLGKELVQL------DKLQLVGTSCLFIASKYEEVYSPSIKHFASETDGAC 336
Query: 134 DKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKG----IERRTLNEIIIQTQD 189
+D + + E IL+ LK+ + P+ +R I K I+ RTL + +++
Sbjct: 337 TEDEIKEGEKFILKTLKFNLNYPNPMNFLR------RISKADDYDIQSRTLAKFLLE--- 387
Query: 190 NISFTRFR-----PSVIAASAVLTACRLLYDDIYEENKKILLSRKYVEEEDLETC 239
IS FR PS+ AA+A+ + ++L ++ N I S Y +EE C
Sbjct: 388 -ISLVDFRFIGILPSLCAAAAMFMSRKMLGKGKWDGN-LIHYSGGYTKEELAPVC 440
>sp|Q9DG96|CCNB2_ORYLU G2/mitotic-specific cyclin-B2 OS=Oryzias luzonensis GN=ccnb2 PE=2
SV=1
Length = 386
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 37/210 (17%)
Query: 19 KYFNV-ETEWMADEGYAESKEVTLRKVAMHV----ILRSAFWVLLDSFPVQNSKSDKLDA 73
KY +V E + Y + EVT R A+ V + S F +L ++
Sbjct: 129 KYLHVLEEQQPVRANYMQGYEVTERMRALLVDWLVQVHSRFQLLQETL------------ 176
Query: 74 FIPYLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE-----FL 128
YL + I DRF+ H + R + L + + +A K + PE ++
Sbjct: 177 ---YLTVAILDRFLQVHPVS------RRKLQLVGVTAMLVACKYEE--MYTPEVADFSYI 225
Query: 129 GKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLNEIIIQ-T 187
K +++ME ILR L +Q+ P+ +R ++ G +E+ TL + +++ T
Sbjct: 226 TDNAFTKSQIVEMEQVILRSLSFQLGRPLPLHFLRRATKV--AGADVEKHTLAKYLMELT 283
Query: 188 QDNISFTRFRPSVIAASAVLTACRLLYDDI 217
+ +RPS +AA+A L +LL D +
Sbjct: 284 LLDYHMVHYRPSEVAAAA-LCLSQLLLDGL 312
>sp|Q9IBG0|CCNB2_ORYLA G2/mitotic-specific cyclin-B2 OS=Oryzias latipes GN=ccnb2 PE=2 SV=1
Length = 387
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE-----FLGKW 131
YL + I DRF+ H + R + L + + +A K + PE ++
Sbjct: 178 YLTVAILDRFLQVHPVS------RRKLQLVGVTAMLVACKYEE--MYAPEVGDFAYITDN 229
Query: 132 NLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRTLNEIIIQ-TQDN 190
K +++ME ILR L +Q+ P+ +R ++ G +E+ TL + +++ T +
Sbjct: 230 AFTKSQIVEMEQVILRSLSFQLGRPLPLHFLRRATKV--AGADVEKHTLAKYLMELTLLD 287
Query: 191 ISFTRFRPSVIAASAVLTACRLLYDDI 217
+RPS +AA+A L +LL D +
Sbjct: 288 YHMVHYRPSEVAAAA-LCLSQLLLDGL 313
>sp|P39948|CCND1_RAT G1/S-specific cyclin-D1 OS=Rattus norvegicus GN=Ccnd1 PE=2 SV=1
Length = 295
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 78 LAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKWNLDKDL 137
LAMN DRF+S L + + L +C+ +A KM++ ++P K + D
Sbjct: 80 LAMNYLDRFLSLEPLK------KSRLQLLGATCMFVASKMKE---TIPLTAEKLCIYTDN 130
Query: 138 MLK------MELQILRGLKWQMRAVTPICLVRFFVEMIPIG---KGIERRTLNEIIIQTQ 188
++ MEL ++ LKW + A+TP + F+ +P K I R+ +
Sbjct: 131 SIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEADENKQIIRKHAQTFVALCA 190
Query: 189 DNISFTRFRPSVIAASAVLTA 209
++ F PS++AA +V+ A
Sbjct: 191 TDVKFISNPPSMVAAGSVVAA 211
>sp|Q10Q62|CCF32_ORYSJ Putative cyclin-F3-2 OS=Oryza sativa subsp. japonica GN=CYCF3-2
PE=3 SV=1
Length = 406
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 75 IPYLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPEFLGKWNLD 134
I YLA++ DRF+SR+ + R+ + L S L +A K D F D
Sbjct: 189 ILYLAVSYVDRFLSRNVV------NRERLQLLGTSALFVASKYEDRCHPSARFFSSITAD 242
Query: 135 ---KDLMLKMELQILRGLKWQMRAVTPICLVRFFV-----EMIPIGKGIERRT--LNEII 184
++ ME IL L +QM + T I +R F+ PI +E L E+
Sbjct: 243 TYTTQQVVAMEANILSFLNFQMGSPTVITFLRRFLFSCRGSNRPINIRLELMCIYLAELS 302
Query: 185 IQTQDNISFTRFRPSVIAASAVLTACRLLYDDIYEENKKILLSRKYVEEEDLETCLDETY 244
+ NI RF PS++AA+ + L + N + Y + D+E C+ +
Sbjct: 303 LLDDYNI---RFLPSIVAAACLFVGKFTLNPNTRPWNLSVQRITGY-KVSDIEDCIRSIH 358
Query: 245 EKCIEKKILLLRDV 258
+ +K LR +
Sbjct: 359 DLQAGRKWSNLRAI 372
>sp|P39949|CCNE1_RAT G1/S-specific cyclin-E1 OS=Rattus norvegicus GN=Ccne1 PE=2 SV=2
Length = 411
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 99/219 (45%), Gaps = 38/219 (17%)
Query: 8 PLP----AYKEEQFEKYFNVETEWMADEGYAESKEVTLRKVAMHVILRSAFWVLLDSFPV 63
PLP A +EE + N E ++ DE + + H +L++ +L + +
Sbjct: 105 PLPVLNWANREEVWRIMLNKEKTYLRDEHFLQR----------HPLLQARMRAVLLDWLM 154
Query: 64 QNSKSDKLDAFIPYLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRD---- 119
+ + KL YLA + FDR+++ Q + ++ + L S L +A K+ +
Sbjct: 155 EVCEVYKLHRETFYLAQDFFDRYMASQQ-----NIIKTLLQLIGISALFIASKLEEIYPP 209
Query: 120 --NSFSVPEFLGKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPI---GKG 174
+ F+ ++ D +L MEL +++ LKW++ +T + + +V++ + G+
Sbjct: 210 KLHQFA---YVTDGACSGDEILTMELMMMKALKWRLSPLTIVSWLNVYVQVAYVNDTGEV 266
Query: 175 IERRTLNEIIIQTQD-------NISFTRFRPSVIAASAV 206
+ + ++ +Q + ++ F V+AASA+
Sbjct: 267 LMPQYPQQVFVQIAELLDLCVLDVGCLEFPYGVLAASAL 305
>sp|P51776|PPDK_GIAIN Pyruvate, phosphate dikinase OS=Giardia intestinalis PE=3 SV=1
Length = 884
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 82 IFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSV--PEFLGKWNLDKDLML 139
++ F+ Q V+ +R + L + +WK + S+ + G +N M+
Sbjct: 276 LYGEFLQNAQGEDVVAGIRTPVNLKEMPTINASWKACYDELSLIYAKLEGYYND----MV 331
Query: 140 KMELQILRGLKWQMRAV----TPICLVRFFVEMIPIGKGIERRTLNEIIIQTQDNISFTR 195
+E + G W ++A T +VR ++M G E L I + F R
Sbjct: 332 DLEFTVENGKLWMLQARAGKRTGFAMVRIAIDMCKEGMLTEEEALLRIDANKINEFLFKR 391
Query: 196 FRPSV-------------IAASAVLTACRLLYDDIYEENKKILLSRKYVEEEDL 236
F PSV AA V+ C + ++ E+ KK++L+R ED+
Sbjct: 392 FDPSVKPVVLGKGIPASPGAAVGVICFCPMRTCELAEQGKKVILTRIETSPEDI 445
>sp|Q39069|CCB13_ARATH Cyclin-B1-3 OS=Arabidopsis thaliana GN=CYCB1-3 PE=2 SV=2
Length = 414
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 36/149 (24%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWK--------------MRDNSF 122
YL +NI DRF+S +P R ++ L S L +A K + DNS+
Sbjct: 213 YLTVNIIDRFLSLKTVP------RRELQLVGVSALLIASKYEEIWPPQVNDLVYVTDNSY 266
Query: 123 SVPEFLGKWNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGKGIERRT--L 180
+ + +L ME IL L+W + T + F++ + +E L
Sbjct: 267 NSRQ-----------ILVMEKTILGNLEWYLTVPTQYVFLVRFIKASGSDQKLENLVHFL 315
Query: 181 NEIIIQTQDNISFTRFRPSVIAASAVLTA 209
E+ + D++ F PS++AASAV TA
Sbjct: 316 AELGLMHHDSLMFC---PSMLAASAVYTA 341
>sp|Q38819|CCA23_ARATH Cyclin-A2-3 OS=Arabidopsis thaliana GN=CYCA2-3 PE=1 SV=2
Length = 450
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 17/142 (11%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRDNSFSVPE-----FLGKW 131
YL + + D F+ + + R + L +C+ +A K + S P F+
Sbjct: 244 YLTVYLIDWFLHGNYVQ------RQQLQLLGITCMLIASKYEE--ISAPRIEEFCFITDN 295
Query: 132 NLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEMIPIGK---GIERRTLNEIIIQ-T 187
+D +L+ME Q+L+ +Q+ TP +R F+ + +E L + + T
Sbjct: 296 TYTRDQVLEMENQVLKHFSFQIYTPTPKTFLRRFLRAAQASRLSPSLEVEFLASYLTELT 355
Query: 188 QDNISFTRFRPSVIAASAVLTA 209
+ F +F PSV+AASAV A
Sbjct: 356 LIDYHFLKFLPSVVAASAVFLA 377
>sp|P47794|CCNE1_DANRE G1/S-specific cyclin-E1 OS=Danio rerio GN=ccne1 PE=2 SV=1
Length = 410
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 77 YLAMNIFDRFISRHQLPTVLDHVRDDIVLAANSCLTLAWKMRD------NSFSVPEFLGK 130
YL + FDRF++ + + ++ + L SCL +A KM + + F+ ++
Sbjct: 169 YLGQDYFDRFMATQE-----NVLKTTLQLIGISCLFIAAKMEEIYPPKVHQFA---YVTD 220
Query: 131 WNLDKDLMLKMELQILRGLKWQMRAVTPICLVRFFVEM 168
+D +L ME+ I++ L W + +TP+ + +++M
Sbjct: 221 GACTEDDILSMEIIIMKELNWSLSPLTPVAWLNIYMQM 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,730,538
Number of Sequences: 539616
Number of extensions: 5900531
Number of successful extensions: 15403
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 15283
Number of HSP's gapped (non-prelim): 160
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)