Query 035820
Match_columns 382
No_of_seqs 256 out of 1630
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 06:43:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035820.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035820hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02276 gibberellin 20-oxidas 100.0 3.1E-84 6.6E-89 632.2 35.2 342 36-378 16-359 (361)
2 PLN02758 oxidoreductase, 2OG-F 100.0 3.3E-84 7.2E-89 631.4 32.7 336 28-370 16-358 (361)
3 PLN02216 protein SRG1 100.0 5.5E-84 1.2E-88 629.0 33.5 335 28-371 16-357 (357)
4 PLN02947 oxidoreductase 100.0 3.3E-83 7.1E-88 625.6 33.1 334 27-371 26-371 (374)
5 PLN02393 leucoanthocyanidin di 100.0 1.1E-81 2.3E-86 614.5 32.8 337 28-371 14-360 (362)
6 PLN02904 oxidoreductase 100.0 4.6E-81 1E-85 608.0 32.7 333 27-370 14-353 (357)
7 PLN02254 gibberellin 3-beta-di 100.0 5.1E-81 1.1E-85 607.4 31.8 315 36-370 26-353 (358)
8 PLN03178 leucoanthocyanidin di 100.0 3E-81 6.5E-86 611.3 30.2 337 28-371 7-358 (360)
9 PLN02912 oxidoreductase, 2OG-F 100.0 1.5E-80 3.3E-85 602.9 31.9 335 24-371 3-345 (348)
10 PLN02639 oxidoreductase, 2OG-F 100.0 1.4E-79 3E-84 595.0 31.5 327 30-371 3-337 (337)
11 PLN02515 naringenin,2-oxogluta 100.0 6.1E-79 1.3E-83 592.8 32.0 319 34-361 9-332 (358)
12 PLN00417 oxidoreductase, 2OG-F 100.0 1.3E-78 2.9E-83 589.3 31.9 329 28-367 8-344 (348)
13 KOG0143 Iron/ascorbate family 100.0 3.2E-78 7E-83 578.9 30.0 303 56-367 14-319 (322)
14 PLN02704 flavonol synthase 100.0 1.2E-77 2.5E-82 581.1 30.3 316 29-357 6-331 (335)
15 PLN02750 oxidoreductase, 2OG-F 100.0 7.1E-77 1.5E-81 577.8 31.3 307 38-355 2-325 (345)
16 PLN02997 flavonol synthase 100.0 4.8E-75 1E-79 559.1 31.0 282 56-354 29-312 (325)
17 PTZ00273 oxidase reductase; Pr 100.0 8.1E-75 1.7E-79 559.1 30.9 294 57-357 3-310 (320)
18 PLN02299 1-aminocyclopropane-1 100.0 5.3E-75 1.2E-79 558.3 28.7 302 57-375 4-312 (321)
19 PLN03002 oxidoreductase, 2OG-F 100.0 1.6E-73 3.5E-78 551.2 29.1 292 58-361 13-323 (332)
20 PLN02485 oxidoreductase 100.0 4.8E-73 1E-77 548.5 29.1 292 58-355 6-322 (329)
21 PLN02156 gibberellin 2-beta-di 100.0 1.1E-72 2.3E-77 544.0 30.3 299 35-361 12-317 (335)
22 PLN02365 2-oxoglutarate-depend 100.0 7E-72 1.5E-76 533.0 28.7 290 58-370 4-297 (300)
23 COG3491 PcbC Isopenicillin N s 100.0 3.8E-71 8.2E-76 507.6 26.3 283 57-346 3-297 (322)
24 PLN02403 aminocyclopropanecarb 100.0 1.3E-70 2.8E-75 523.1 28.6 288 59-371 2-296 (303)
25 PLN02984 oxidoreductase, 2OG-F 100.0 2.3E-70 5E-75 529.0 29.3 288 57-370 36-338 (341)
26 PLN03001 oxidoreductase, 2OG-F 100.0 8.8E-64 1.9E-68 466.9 23.2 253 108-367 1-258 (262)
27 PF14226 DIOX_N: non-haem diox 99.9 3.4E-25 7.3E-30 182.5 9.0 109 60-173 1-116 (116)
28 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 3.2E-25 6.9E-30 177.2 6.7 95 225-322 2-98 (98)
29 PLN03176 flavanone-3-hydroxyla 99.9 2.1E-23 4.6E-28 172.0 11.1 110 28-140 5-117 (120)
30 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.3 0.0025 5.3E-08 50.4 2.2 78 227-321 1-100 (100)
31 smart00702 P4Hc Prolyl 4-hydro 95.7 0.14 3.1E-06 44.8 11.0 105 196-321 60-178 (178)
32 PRK05467 Fe(II)-dependent oxyg 94.4 0.33 7.2E-06 44.5 9.5 49 261-321 129-177 (226)
33 PF12851 Tet_JBP: Oxygenase do 91.4 2.6 5.6E-05 36.9 10.5 70 241-321 84-170 (171)
34 TIGR02466 conserved hypothetic 86.1 3.6 7.8E-05 37.0 7.7 39 270-320 159-198 (201)
35 PRK15401 alpha-ketoglutarate-d 82.4 38 0.00083 30.7 14.9 77 226-318 117-210 (213)
36 PF13759 2OG-FeII_Oxy_5: Putat 71.7 5 0.00011 31.6 3.5 37 270-318 63-100 (101)
37 PF13532 2OG-FeII_Oxy_2: 2OG-F 69.5 6.8 0.00015 34.5 4.2 78 225-318 97-193 (194)
38 PF07350 DUF1479: Protein of u 59.9 5.6 0.00012 39.7 1.9 52 58-116 48-99 (416)
39 PRK08333 L-fuculose phosphate 50.0 21 0.00046 31.4 3.9 37 59-101 120-156 (184)
40 PRK08130 putative aldolase; Va 48.1 24 0.00052 31.9 4.0 37 59-101 127-163 (213)
41 COG3128 PiuC Uncharacterized i 45.0 1.2E+02 0.0026 27.0 7.5 21 301-321 160-180 (229)
42 PLN00052 prolyl 4-hydroxylase; 42.5 99 0.0022 29.8 7.4 87 226-322 133-252 (310)
43 COG2140 Thermophilic glucose-6 39.5 54 0.0012 29.6 4.7 67 224-295 89-158 (209)
44 TIGR02409 carnitine_bodg gamma 39.0 37 0.00081 33.4 4.0 52 58-117 108-159 (366)
45 PRK06755 hypothetical protein; 37.9 28 0.0006 31.5 2.7 38 58-101 135-172 (209)
46 cd00491 4Oxalocrotonate_Tautom 37.3 43 0.00094 22.9 3.1 29 61-89 1-29 (58)
47 PRK05874 L-fuculose-phosphate 37.2 42 0.00092 30.5 3.8 37 59-101 127-163 (217)
48 TIGR00568 alkb DNA alkylation 36.8 1.1E+02 0.0024 26.7 6.1 57 225-289 95-162 (169)
49 COG1402 Uncharacterized protei 36.8 1.1E+02 0.0023 28.6 6.4 97 15-117 26-132 (250)
50 PRK02289 4-oxalocrotonate taut 36.3 48 0.001 23.2 3.2 29 61-89 2-30 (60)
51 cd00379 Ribosomal_L10_P0 Ribos 34.6 89 0.0019 26.3 5.2 39 76-114 3-42 (155)
52 PRK08660 L-fuculose phosphate 33.1 60 0.0013 28.4 4.0 36 59-101 115-150 (181)
53 PRK08087 L-fuculose phosphate 31.9 62 0.0013 29.3 4.0 37 59-101 122-158 (215)
54 PRK02220 4-oxalocrotonate taut 30.4 68 0.0015 22.2 3.2 29 61-89 2-30 (61)
55 cd05797 Ribosomal_L10 Ribosoma 29.6 1.7E+02 0.0036 24.9 6.1 40 75-114 4-44 (157)
56 TIGR00013 taut 4-oxalocrotonat 29.4 69 0.0015 22.3 3.1 29 61-89 1-30 (63)
57 PRK06833 L-fuculose phosphate 29.3 60 0.0013 29.3 3.4 37 59-101 124-160 (214)
58 PF14178 YppF: YppF-like prote 28.7 1E+02 0.0022 22.0 3.7 35 341-375 14-48 (60)
59 PF01361 Tautomerase: Tautomer 28.3 52 0.0011 22.8 2.3 29 61-89 1-29 (60)
60 PF00596 Aldolase_II: Class II 27.8 34 0.00074 29.8 1.5 38 58-101 122-160 (184)
61 PRK03634 rhamnulose-1-phosphat 27.2 74 0.0016 30.0 3.7 37 59-101 179-215 (274)
62 PRK00745 4-oxalocrotonate taut 26.9 84 0.0018 21.8 3.2 29 61-89 2-30 (62)
63 PRK00099 rplJ 50S ribosomal pr 26.1 2.1E+02 0.0045 24.8 6.1 40 75-114 5-45 (172)
64 COG3384 Aromatic ring-opening 26.0 1.5E+02 0.0032 27.9 5.3 42 56-99 129-170 (268)
65 PF11243 DUF3045: Protein of u 25.2 61 0.0013 24.4 2.1 20 82-101 37-56 (89)
66 TIGR02624 rhamnu_1P_ald rhamnu 25.2 82 0.0018 29.7 3.6 37 59-101 177-213 (270)
67 PRK06357 hypothetical protein; 24.9 1E+02 0.0022 27.9 4.1 37 59-101 130-172 (216)
68 TIGR01086 fucA L-fuculose phos 24.1 86 0.0019 28.3 3.4 37 59-101 121-157 (214)
69 cd05796 Ribosomal_P0_like Ribo 23.3 1.7E+02 0.0038 25.1 5.1 39 76-114 3-42 (163)
70 PF00466 Ribosomal_L10: Riboso 23.0 3.4E+02 0.0073 20.8 6.3 42 74-115 4-46 (100)
71 PRK06661 hypothetical protein; 22.7 92 0.002 28.5 3.4 38 60-101 124-161 (231)
72 COG2450 Uncharacterized conser 22.6 1.3E+02 0.0027 24.9 3.7 36 58-94 64-99 (124)
73 TIGR02410 carnitine_TMLD trime 22.3 1.1E+02 0.0024 30.0 4.1 51 59-116 100-150 (362)
74 cd00398 Aldolase_II Class II A 22.2 64 0.0014 28.9 2.2 40 58-101 121-160 (209)
75 COG3113 Predicted NTP binding 22.1 1.9E+02 0.0041 22.9 4.4 45 59-105 40-84 (99)
76 PRK06557 L-ribulose-5-phosphat 21.9 93 0.002 28.1 3.2 37 59-101 130-168 (221)
77 PRK01964 4-oxalocrotonate taut 21.9 1.1E+02 0.0024 21.4 3.1 29 61-89 2-30 (64)
78 cd05795 Ribosomal_P0_L10e Ribo 21.6 2E+02 0.0043 25.1 5.2 39 76-114 3-42 (175)
79 PLN02433 uroporphyrinogen deca 21.3 1.9E+02 0.004 28.2 5.4 47 70-116 288-338 (345)
80 PF14401 RLAN: RimK-like ATPgr 21.2 54 0.0012 28.1 1.4 27 280-306 16-47 (153)
81 PF08140 Cuticle_1: Crustacean 21.1 1.1E+02 0.0023 20.0 2.4 32 266-298 6-37 (40)
82 KOG0256 1-aminocyclopropane-1- 21.1 2.1E+02 0.0045 28.8 5.5 55 63-117 393-460 (471)
83 PF11142 DUF2917: Protein of u 20.8 1.6E+02 0.0035 21.0 3.6 35 264-298 20-54 (63)
84 PRK05834 hypothetical protein; 20.4 1.2E+02 0.0027 26.9 3.6 39 59-101 121-161 (194)
85 PF05118 Asp_Arg_Hydrox: Aspar 20.3 1.7E+02 0.0037 25.1 4.4 58 243-318 92-157 (163)
86 PF04914 DltD_C: DltD C-termin 20.2 1.4E+02 0.0029 24.9 3.6 31 63-97 64-94 (130)
No 1
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=3.1e-84 Score=632.17 Aligned_cols=342 Identities=65% Similarity=1.146 Sum_probs=307.6
Q ss_pred cCCCCCCCccCCCCCCCCC-CCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhh
Q 035820 36 KQTNLPVEFTWSKGDLVSS-HGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDN 114 (382)
Q Consensus 36 ~~~~vP~~~i~p~~~~~~~-~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~ 114 (382)
...+||..|++|.+++|.. ....+||||||+.+.++|+++|.+++++|.+||++||||||+||||+.++++++++++++
T Consensus 16 ~~~~vp~~~~~~~~~~p~~~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~ 95 (361)
T PLN02276 16 KQSNIPAQFIWPDEEKPSAAVPELAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDA 95 (361)
T ss_pred CCCCCCHHhcCCccccCCCCCcCCCCCeEEChhhcCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4468999999999998863 234689999999998777778889999999999999999999999999999999999999
Q ss_pred hcCCCHHHHhhccCCCCCCccccCCCCCccCCCCCceeceeccccCCCC-CccccccccCCCCcchhhHHHHHHHHHHHH
Q 035820 115 FFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSL-NPMVVNFFNSNIGKDFEQTGIIYQKYCEAM 193 (382)
Q Consensus 115 FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~-~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~ 193 (382)
||+||.|+|+++....+..+||.....+..++..||+|.|.++..+... ......|+.+.||+++++||+.+++|+..|
T Consensus 96 FF~LP~eeK~k~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~~ 175 (361)
T PLN02276 96 FFKLPLSEKQRAQRKPGESCGYASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAM 175 (361)
T ss_pred HHcCCHHHHHhhccCCCCccccCccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHHHHHHHHHHHH
Confidence 9999999999997765567899876665555677999999997654321 111224555667777889999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCCCCceEEEeCCeEE
Q 035820 194 KCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGGLEVFANNRWQ 273 (382)
Q Consensus 194 ~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~~~g~W~ 273 (382)
.+|+..||++|+++|| |++++|.+.+....+.||++|||+|+.++..+|+++|||+|+||||+||+++||||+.+|+|+
T Consensus 176 ~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi 254 (361)
T PLN02276 176 KTLSLKIMELLGISLG-VDRGYYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVFVDNKWR 254 (361)
T ss_pred HHHHHHHHHHHHHHcC-CCHHHHHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEEECCEEE
Confidence 9999999999999999 999999999988889999999999999988999999999999999999999999999999999
Q ss_pred EeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCCHHHHHH
Q 035820 274 SVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLE 353 (382)
Q Consensus 274 ~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~ 353 (382)
+|+|++|++|||+||+||+||||+|||++|||++++.++|||++||++|+.|++|.|+++|+++++|++|++++|+||++
T Consensus 255 ~V~p~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~ 334 (361)
T PLN02276 255 SVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLE 334 (361)
T ss_pred EcCCCCCeEEEEcHHHHHHHhCCccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhHHHHHHhHhhcCC
Q 035820 354 FTQKHYRSDYATLENFTKWLLTSKP 378 (382)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (382)
+...+...++..++.|+.|....|.
T Consensus 335 ~~~~~~~~~~~~l~~~~~~~~~~~~ 359 (361)
T PLN02276 335 FTQKHYRADMNTLQAFSNWLQSSNN 359 (361)
T ss_pred HHHHhcccchhHHHHHHHHHhccCC
Confidence 9888888888889999999876554
No 2
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.3e-84 Score=631.42 Aligned_cols=336 Identities=29% Similarity=0.447 Sum_probs=302.0
Q ss_pred chhhhhhccCCCCCCCccCCCCCCCCCC-----CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCH
Q 035820 28 LVDSSLWQKQTNLPVEFTWSKGDLVSSH-----GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDA 102 (382)
Q Consensus 28 ~~~~~~~~~~~~vP~~~i~p~~~~~~~~-----~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~ 102 (382)
.+|.|++++.++||.+|++|.+++|... ...+||||||+.+.+++..++.+++++|++||++||||||+||||+.
T Consensus 16 ~~~~l~~~~~~~vp~~~v~~~~~~p~~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~ 95 (361)
T PLN02758 16 DVQELRKSKPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGIEL 95 (361)
T ss_pred cHHHHHhcCCCCCCHHHcCCchhccccccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCH
Confidence 4799999999999999999999988531 34579999999998777667778899999999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCHHHHhhccCCCCCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhH
Q 035820 103 SLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQT 182 (382)
Q Consensus 103 ~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~f 182 (382)
++++++++++++||+||.|+|+++...++..+||+.......++..||+|.|.++..|.. ....+.||..+ +.|
T Consensus 96 ~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~~WP~~~-----~~f 169 (361)
T PLN02758 96 ELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHF-IRNPKLWPTKP-----ARF 169 (361)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcccCCCccccCcccccccccccCeeEEEEeeccCcc-ccccccCcccc-----HHH
Confidence 999999999999999999999999875556789976554444566799999988776643 33467788653 789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCC--
Q 035820 183 GIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQ-- 260 (382)
Q Consensus 183 r~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~-- 260 (382)
|+.+++|+++|.+|+.+||++|+++|| |++++|.+.+....+.||+||||+|++++..+|+++|||+|+||||+||+
T Consensus 170 r~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~ 248 (361)
T PLN02758 170 SETLEVYSREIRELCQRLLKYIAMTLG-LKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGS 248 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-CChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCC
Confidence 999999999999999999999999999 99999999998888999999999999999999999999999999999974
Q ss_pred CCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCC
Q 035820 261 VGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGT 340 (382)
Q Consensus 261 ~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p 340 (382)
++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||++++.++|||++||++|+.|++|.|+++|+++++|
T Consensus 249 v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p 328 (361)
T PLN02758 249 CVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENP 328 (361)
T ss_pred CCCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCC
Confidence 89999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHhhhhhhhhHHHHH
Q 035820 341 RIYPDFTWSDLLEFTQKHYRSDYATLENFT 370 (382)
Q Consensus 341 ~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~ 370 (382)
++|++++|+||+.........++..++.++
T Consensus 329 ~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~ 358 (361)
T PLN02758 329 CKYRRYNHGEYSRHYVTSKLQGKKTLEFAK 358 (361)
T ss_pred CcCCCccHHHHHHHHHhcccCchhhhhhhc
Confidence 999999999999988777766666666554
No 3
>PLN02216 protein SRG1
Probab=100.00 E-value=5.5e-84 Score=629.00 Aligned_cols=335 Identities=27% Similarity=0.414 Sum_probs=298.6
Q ss_pred chhhhhhc-cCCCCCCCccCCCCCCCCCC----CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCH
Q 035820 28 LVDSSLWQ-KQTNLPVEFTWSKGDLVSSH----GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDA 102 (382)
Q Consensus 28 ~~~~~~~~-~~~~vP~~~i~p~~~~~~~~----~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~ 102 (382)
.|+.++.+ ++++||++||+|++++|... ...+||||||+.+.+++. +.+++++|++||++||||||+||||+.
T Consensus 16 ~~~~~~~~~~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~--~~~~~~~l~~Ac~~~GFF~v~nHGI~~ 93 (357)
T PLN02216 16 SVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTA--MDSEVEKLDFACKEWGFFQLVNHGIDS 93 (357)
T ss_pred hHHHHHhcCCCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCcc--HHHHHHHHHHHHHHCcEEEEECCCCCH
Confidence 38888776 78999999999999987531 125799999999876553 346889999999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCHHHHhhccCCCCCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhH
Q 035820 103 SLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQT 182 (382)
Q Consensus 103 ~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~f 182 (382)
++++++++++++||+||.|+|+++....+..+||+.......++..||+|.|.++..|.. ....+.||..+ +.|
T Consensus 94 ~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~~WP~~p-----~~f 167 (357)
T PLN02216 94 SFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVR-LRKPHLFPKLP-----LPF 167 (357)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCccccccccccCCceeeeeeeccCcc-cccchhcccch-----HHH
Confidence 999999999999999999999999776556789976554444567899999988765543 34467788643 789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhc-cCceeEEeccCCCCCCCCCccccCCCCCCceeEEec-CC
Q 035820 183 GIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEE-GCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQ-DQ 260 (382)
Q Consensus 183 r~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~q-d~ 260 (382)
|+++++|+++|.+|+.+||++|+++|| |++++|.+.+.. ..+.||+||||||++++.++|+++|||+|+||||+| |+
T Consensus 168 r~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~ 246 (357)
T PLN02216 168 RDTLETYSAEVKSIAKILFAKMASALE-IKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNE 246 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCC
Confidence 999999999999999999999999999 999999998875 457899999999999999999999999999999999 57
Q ss_pred CCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCC
Q 035820 261 VGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGT 340 (382)
Q Consensus 261 ~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p 340 (382)
++||||+++|+|++|+|+||++|||+||+||+||||+|||++|||++++.++|||++||++|+.|++|.|+++|+++++|
T Consensus 247 v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p 326 (357)
T PLN02216 247 VEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKA 326 (357)
T ss_pred CCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHhhhhhhhhHHHHHH
Q 035820 341 RIYPDFTWSDLLEFTQKHYRSDYATLENFTK 371 (382)
Q Consensus 341 ~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 371 (382)
++|+++||+||++....+...++..++.||+
T Consensus 327 ~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 357 (357)
T PLN02216 327 ALFKSLTTKEYFDGLFSRELDGKAYLDAMRI 357 (357)
T ss_pred CCCCCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence 9999999999999888888878888888763
No 4
>PLN02947 oxidoreductase
Probab=100.00 E-value=3.3e-83 Score=625.63 Aligned_cols=334 Identities=29% Similarity=0.423 Sum_probs=297.2
Q ss_pred cchhhhhhccCCCCCCCccCCCCCCCCC-C-------CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeC
Q 035820 27 SLVDSSLWQKQTNLPVEFTWSKGDLVSS-H-------GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINH 98 (382)
Q Consensus 27 ~~~~~~~~~~~~~vP~~~i~p~~~~~~~-~-------~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nH 98 (382)
..||.|+.+++.+||.+||+|++++|.. . ...+||||||+.+.+ ..+.+++++|++||++||||||+||
T Consensus 26 ~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~---~~~~~~~~~l~~Ac~~~GFF~v~nH 102 (374)
T PLN02947 26 KGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRG---SNRPHVLATLAAACREYGFFQVVNH 102 (374)
T ss_pred cCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCC---ccHHHHHHHHHHHHHHCcEEEEEcC
Confidence 3479999999999999999999998853 1 345799999999864 2367789999999999999999999
Q ss_pred CCCHHHHHHHHHHhhhhcCCCHHHHhhccCC-CCCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCc
Q 035820 99 GIDASLISAAHDQIDNFFKLPTSRKLKAQRM-PGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGK 177 (382)
Q Consensus 99 GI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~-~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~ 177 (382)
||+.++++++++.+++||+||.|+|+++... .....||+.......++..+|+|.|.+...|.. ...+.||.++
T Consensus 103 GIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p~~--~~~~~WP~~~--- 177 (374)
T PLN02947 103 GVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLS--DVLPHWPSSP--- 177 (374)
T ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeeecCCcc--cccccCccch---
Confidence 9999999999999999999999999998653 233467865544344567899999987655543 2356788653
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC---hhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCcee
Q 035820 178 DFEQTGIIYQKYCEAMKCLSLGITELLAISLGIND---RLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLT 254 (382)
Q Consensus 178 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~---~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lT 254 (382)
+.||+++++|+++|.+|+.+||++|+++|| |+ .++|.+.+....+.||+||||+|++++.++|+++|||+|+||
T Consensus 178 --~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lg-l~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lT 254 (374)
T PLN02947 178 --ADLRKVAATYAKATKRLFLELMEAILESLG-IVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLT 254 (374)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceE
Confidence 789999999999999999999999999999 96 457777777778899999999999999999999999999999
Q ss_pred EEecCCCCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCc
Q 035820 255 ILHQDQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDL 334 (382)
Q Consensus 255 lL~qd~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~ 334 (382)
||+||+++||||+++|+|++|+|+||++|||+||+||+||||+|||++|||++++.++||||+||+.|+.|++|.|+++|
T Consensus 255 lL~Qd~v~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~l 334 (374)
T PLN02947 255 LLLQDEVEGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPEL 334 (374)
T ss_pred EEEecCCCCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHh
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHhhhhhhhhHHHHHH
Q 035820 335 ICRQGTRIYPDFTWSDLLEFTQKHYRSDYATLENFTK 371 (382)
Q Consensus 335 v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 371 (382)
+++++|++|++++|+||+++++.+...++..++.||+
T Consensus 335 v~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~ 371 (374)
T PLN02947 335 VDEQNPRRYMDTDFATFLAYLASAEGKHKNFLESRKL 371 (374)
T ss_pred cCCCCCCcCCCCCHHHHHHHHHHhccCchhhhhhhhc
Confidence 9999999999999999999998888888888888875
No 5
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=1.1e-81 Score=614.48 Aligned_cols=337 Identities=29% Similarity=0.487 Sum_probs=298.9
Q ss_pred chhhhhhccCCCCCCCccCCCCCCCCC------CCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 28 LVDSSLWQKQTNLPVEFTWSKGDLVSS------HGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 28 ~~~~~~~~~~~~vP~~~i~p~~~~~~~------~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.|+.++.++..+||+.||+|++++|.. ....+||||||+.+.++|+.+|.+++++|.+||++||||||+||||+
T Consensus 14 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~ 93 (362)
T PLN02393 14 RVQSLSESGLPTIPDRYVKPPSQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNHGVR 93 (362)
T ss_pred hHHHHHhcCCCcCCHHHcCCchhccccccccccCcCCCCCeEECccccCCChHHHHHHHHHHHHHHHHCcEEEEEeCCCC
Confidence 488888888999999999999998853 24468999999999887777889999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhh
Q 035820 102 ASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQ 181 (382)
Q Consensus 102 ~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~ 181 (382)
.++++++++++++||+||.|+|+++...+...+||+...........||+|.|.++..|.. ....+.||..+ +.
T Consensus 94 ~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~-~~~~n~wP~~~-----~~ 167 (362)
T PLN02393 94 PELMDRAREAWREFFHLPLEVKQRYANSPATYEGYGSRLGVEKGAILDWSDYYFLHYLPSS-LKDPNKWPSLP-----PS 167 (362)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhhcccCcccccccccccccccccCchhheeeeecCcc-ccchhhCcccc-----hH
Confidence 9999999999999999999999999875556789953322222456799999987654433 23457788643 78
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhcc---CceeEEeccCCCCCCCCCccccCCCCCCceeEEec
Q 035820 182 TGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEG---CSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQ 258 (382)
Q Consensus 182 fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~---~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~q 258 (382)
||+.+++|+++|.+|+.+||++|+++|| +++++|.+.+... .+.||++|||+|++++..+|+++|||+|+||||+|
T Consensus 168 fr~~~~~y~~~~~~la~~ll~~la~~Lg-l~~~~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q 246 (362)
T PLN02393 168 CRELIEEYGEEVVKLCGRLMKVLSVNLG-LEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLP 246 (362)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhCCCccccceeeeeecCCCCCcccccccccccCCceEEEEee
Confidence 9999999999999999999999999999 9999999988643 36899999999999888999999999999999998
Q ss_pred -CCCCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCC
Q 035820 259 -DQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICR 337 (382)
Q Consensus 259 -d~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~ 337 (382)
++++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++.++||||+||++|+.|++|.|+++|+++
T Consensus 247 ~~~v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~ 326 (362)
T PLN02393 247 DDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTP 326 (362)
T ss_pred CCCCCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecCCCCceEeCcHHhcCC
Confidence 4799999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhhhhhhhhHHHHHH
Q 035820 338 QGTRIYPDFTWSDLLEFTQKHYRSDYATLENFTK 371 (382)
Q Consensus 338 ~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 371 (382)
++|++|++++|+||+++...++..+...++.+|+
T Consensus 327 ~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~ 360 (362)
T PLN02393 327 DRPALYPPMTFDEYRLFIRTKGPRGKSQVESLKS 360 (362)
T ss_pred CCCCCCCCccHHHHHHHHHhcccCcchHHhhhcc
Confidence 9999999999999999888777777666776654
No 6
>PLN02904 oxidoreductase
Probab=100.00 E-value=4.6e-81 Score=608.02 Aligned_cols=333 Identities=26% Similarity=0.390 Sum_probs=292.3
Q ss_pred cchhhhhhccCCCCCCCccCCCCCCCCC--C---CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 27 SLVDSSLWQKQTNLPVEFTWSKGDLVSS--H---GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 27 ~~~~~~~~~~~~~vP~~~i~p~~~~~~~--~---~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
..|+++++++..+||++||+|++++|.. . ...+||||||+.+.+ +..|.+++++|++||++||||||+||||+
T Consensus 14 ~~~~~l~~~~~~~vp~~~~~~~~~~p~~~~~~~~~~~~iPvIDls~~~~--~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~ 91 (357)
T PLN02904 14 TSAMTLTNSGVPHVPDRYVLPPSQRPMLGSSIGTSTITLPVIDLSLLHD--PLLRSCVIHEIEMACKGFGFFQVINHGIP 91 (357)
T ss_pred cchHHHHhcCCCCCCHHhCCCchhcccccccccccCCCCCEEECcccCC--chhHHHHHHHHHHHHHHCceEEEEeCCCC
Confidence 3588999999999999999999999864 1 235799999998864 34678899999999999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCCHHHHhhccCCC-CCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchh
Q 035820 102 ASLISAAHDQIDNFFKLPTSRKLKAQRMP-GNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFE 180 (382)
Q Consensus 102 ~~l~~~~~~~~~~FF~lP~eeK~~~~~~~-~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~ 180 (382)
.++++++++++++||+||.|+|+++.... ....||+.......+...+|+|.+.....|.. ...+.||.. .+
T Consensus 92 ~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~p~~--~~~n~WP~~-----~p 164 (357)
T PLN02904 92 SSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVRYGTSLNHSTDRVHYWRDFIKHYSHPLS--KWINLWPSN-----PP 164 (357)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCcccccccccccCCCCCCceEEeeeccCCcc--cccccCccc-----ch
Confidence 99999999999999999999999987532 23346654333333455689998765433332 235678754 37
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCC
Q 035820 181 QTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQ 260 (382)
Q Consensus 181 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~ 260 (382)
.||+.+++|+++|.+|+.+||++||++|| |++++|.+.+....+.||++|||+|+.++.++|+++|||+|+||||+||
T Consensus 165 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~qd- 242 (357)
T PLN02904 165 CYKEKVGKYAEATHVLHKQLIEAISESLG-LEKNYLQEEIEEGSQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQS- 242 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhcCcccEEEeeecCCCCCcccccCCcCccCCCceEEEecC-
Confidence 89999999999999999999999999999 9999999998888889999999999999889999999999999999997
Q ss_pred CCceEEEe-CCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCC
Q 035820 261 VGGLEVFA-NNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQG 339 (382)
Q Consensus 261 ~~GLqv~~-~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~ 339 (382)
++||||+. +|+|++|+|+||++|||+||+||+||||+|||++|||++++..+||||+||+.|+.|++|+|+++++++++
T Consensus 243 ~~GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~ 322 (357)
T PLN02904 243 SQGLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENK 322 (357)
T ss_pred CCeeeEEeCCCCEEECCCCCCeEEEEccHHHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCC
Confidence 58999986 68999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhhhhhHHHHH
Q 035820 340 TRIYPDFTWSDLLEFTQKHYRSDYATLENFT 370 (382)
Q Consensus 340 p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~ 370 (382)
|++|+++||+||++++++++..++..++.|+
T Consensus 323 p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~ 353 (357)
T PLN02904 323 PAAYGEFSFNDFLDYISSNDITQERFIDTLK 353 (357)
T ss_pred CCcCCCCCHHHHHHHHHhcccCcchHHHHhc
Confidence 9999999999999999998888877777775
No 7
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=5.1e-81 Score=607.41 Aligned_cols=315 Identities=33% Similarity=0.515 Sum_probs=275.8
Q ss_pred cCCCCCCCccCCCCCC--CCC-----CCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHH
Q 035820 36 KQTNLPVEFTWSKGDL--VSS-----HGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAA 108 (382)
Q Consensus 36 ~~~~vP~~~i~p~~~~--~~~-----~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~ 108 (382)
...+||.+||+|++++ |.. ....+||||||+.. .++++|.+||++||||||+||||+.++++++
T Consensus 26 ~~~~vp~~~v~p~~~~~~~~~~~~~~~~~~~iPvIDl~~~---------~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~ 96 (358)
T PLN02254 26 SLQTLPDSHVWTPKDDLLFSSAPSPSTTDESIPVIDLSDP---------NALTLIGHACETWGVFQVTNHGIPLSLLDDI 96 (358)
T ss_pred hhccCChhhcCChhhccCccccccccCcCCCCCeEeCCCH---------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHH
Confidence 3458999999999998 421 12357999999842 3578999999999999999999999999999
Q ss_pred HHHhhhhcCCCHHHHhhccCCCCCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHH
Q 035820 109 HDQIDNFFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQK 188 (382)
Q Consensus 109 ~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~ 188 (382)
++++++||+||.|+|+++.+..+...||+.........+.||+|.|.+...|.. ...+.||..+ +.||+++++
T Consensus 97 ~~~~~~FF~LP~EeK~k~~~~~~~~~Gy~~~~~~~~~~~~~w~e~~~~~~~p~~--~~~~~wP~~~-----~~fr~~~~~ 169 (358)
T PLN02254 97 ESQTRRLFSLPAQRKLKAARSPDGVSGYGVARISSFFNKKMWSEGFTIMGSPLE--HARQLWPQDH-----TKFCDVMEE 169 (358)
T ss_pred HHHHHHHHcCCHHHHHhhccCCCCcccccccccccccCCCCceeeEEeecCccc--cchhhCCCCc-----hHHHHHHHH
Confidence 999999999999999999876566789987655544567899999988655532 2356788643 789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCChhhHHHHh-----hccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCCCCc
Q 035820 189 YCEAMKCLSLGITELLAISLGINDRLHYREFF-----EEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGG 263 (382)
Q Consensus 189 y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~-----~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~G 263 (382)
|+++|.+|+.+||++|+++|| |++++|.+.+ .+..+.||+||||||++++.++|+++|||+|+||||+||+++|
T Consensus 170 Y~~~~~~L~~~ll~~la~~Lg-l~~~~~~~~~~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Qd~v~G 248 (358)
T PLN02254 170 YQKEMKKLAERLMWLMLGSLG-ITEEDIKWAGPKSGSQGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQSNTSG 248 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhhcccccCcceeEEEecCCCCCCcccccCcCCccCCCcEEEEecCCCCC
Confidence 999999999999999999999 9999998766 3566789999999999999999999999999999999999999
Q ss_pred eEEEeCC-eEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCC
Q 035820 264 LEVFANN-RWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRI 342 (382)
Q Consensus 264 Lqv~~~g-~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~ 342 (382)
|||+++| +|++|+|+||++|||+||+||+||||+|||++|||++++.++||||+||++|+.|++|.|+++|+++++|++
T Consensus 249 LQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~~ 328 (358)
T PLN02254 249 LQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPPL 328 (358)
T ss_pred ceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCeeccccceeecCCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCcc
Confidence 9998776 899999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhhhhhhhHHHHH
Q 035820 343 YPDFTWSDLLEFTQKHYRSDYATLENFT 370 (382)
Q Consensus 343 y~~~~~~e~~~~~~~~~~~~~~~~~~~~ 370 (382)
|+++||+||++...+++.. .++.|+
T Consensus 329 Y~~~t~~ey~~~~~~~~~~---~~~~~~ 353 (358)
T PLN02254 329 YRSVTWKEYLATKAKHFNK---ALSLIR 353 (358)
T ss_pred cCCcCHHHHHHHHHHhhhh---hhhhhh
Confidence 9999999999876655554 444444
No 8
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=3e-81 Score=611.33 Aligned_cols=337 Identities=25% Similarity=0.388 Sum_probs=297.2
Q ss_pred chhhhhhccCCCCCCCccCCCCCCCCCC---------CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeC
Q 035820 28 LVDSSLWQKQTNLPVEFTWSKGDLVSSH---------GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINH 98 (382)
Q Consensus 28 ~~~~~~~~~~~~vP~~~i~p~~~~~~~~---------~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nH 98 (382)
.++.++.+++.+||+.|++|.+.++... ...+||||||+.+.++++++|.+++++|++||++||||||+||
T Consensus 7 ~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nH 86 (360)
T PLN03178 7 RVEALASSGVSSIPKEYIRPPEERPSIGDVFEEEKKAAGPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVMHLVGH 86 (360)
T ss_pred hHHHHHhcCCCCCCHHHcCCchhcccccccccccccccCCCCCEEEchhhcCCChhhHHHHHHHHHHHHHHCCEEEEEcC
Confidence 4789998889999999999999987541 2457999999999888877888999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhhhcCCCHHHHhhccCCC--CCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCC
Q 035820 99 GIDASLISAAHDQIDNFFKLPTSRKLKAQRMP--GNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIG 176 (382)
Q Consensus 99 GI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~--~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~ 176 (382)
||+.++++++++.+++||+||.|+|+++.... +..+||+.......++..||+|.|.....|.+ ....+.||..
T Consensus 87 GI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~n~wP~~--- 162 (360)
T PLN03178 87 GIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAAQGYGSKLAANASGQLEWEDYFFHLTLPED-KRDPSLWPKT--- 162 (360)
T ss_pred CCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCccccccccccccccccchhHhhccccCCcc-ccccccCCCC---
Confidence 99999999999999999999999999998743 34789976544444566789998866444543 3345678754
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhh---ccCceeEEeccCCCCCCCCCccccCCCCCCce
Q 035820 177 KDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFE---EGCSIMRCNNYPTCQASDLALGTGPHCDPTSL 253 (382)
Q Consensus 177 ~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~l 253 (382)
.+.||+.+++|+++|.+|+.+||++|+++|| |++++|.+.+. ...+.||++|||+|+.++..+|+++|||+|+|
T Consensus 163 --~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~l 239 (360)
T PLN03178 163 --PPDYVPATSEYSRSLRSLATKLLAILSLGLG-LPEDRLEKEVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSAL 239 (360)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhcCcccchhhhheeccCCCCCCccccCcCCccCCCce
Confidence 3789999999999999999999999999999 99999999887 34578999999999998889999999999999
Q ss_pred eEEecCCCCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCce-eeCCC
Q 035820 254 TILHQDQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKV-VRPPQ 332 (382)
Q Consensus 254 TlL~qd~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~-i~p~~ 332 (382)
|||+||+++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||++++..+||||+||++|+.|++ |.|++
T Consensus 240 TlL~qd~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~ 319 (360)
T PLN03178 240 TFILHNMVPGLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLP 319 (360)
T ss_pred EEEeeCCCCceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCccccccceeecCCCCCeEEEEEEecCCcccccccCcH
Confidence 99999999999999999999999999999999999999999999999999999888889999999999999965 59999
Q ss_pred CccCCCCCCCCCCCCHHHHHHHHHHhhhhhhhhHHHHHH
Q 035820 333 DLICRQGTRIYPDFTWSDLLEFTQKHYRSDYATLENFTK 371 (382)
Q Consensus 333 ~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 371 (382)
+|+++++|++|++++|+||+.....++..++..+++.++
T Consensus 320 ~~v~~~~p~~y~p~~~~eyl~~~~~~~~~~~~~~~~~~~ 358 (360)
T PLN03178 320 ELVSKEEPPKFPPRTFGQHVSHKLFKKPQDERNIDAADI 358 (360)
T ss_pred HHcCCCCcccCCCccHHHHHHHHHhcccCcchhHhHHhc
Confidence 999999999999999999999877777767777776553
No 9
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.5e-80 Score=602.91 Aligned_cols=335 Identities=26% Similarity=0.420 Sum_probs=289.5
Q ss_pred CcccchhhhhhccCCCCCCCccCCCCCCCCC-C---CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCC
Q 035820 24 CGVSLVDSSLWQKQTNLPVEFTWSKGDLVSS-H---GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHG 99 (382)
Q Consensus 24 ~~~~~~~~~~~~~~~~vP~~~i~p~~~~~~~-~---~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHG 99 (382)
+....||++. +++..||+.|++|.+++|.. . ...+||||||+.+.+.+ +.+++++|++||++||||||+|||
T Consensus 3 ~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~---~~~~~~~l~~A~~~~GFf~v~nHG 78 (348)
T PLN02912 3 TSKLLVSDIA-SVVDHVPSNYVRPVSDRPNMSEVETSGDSIPLIDLRDLHGPN---RADIINQFAHACSSYGFFQIKNHG 78 (348)
T ss_pred cchhHHHHHh-cCCCCCCHHhcCCchhccccccccccCCCCCeEECcccCCcC---HHHHHHHHHHHHHHCCEEEEEeCC
Confidence 4456688886 78999999999999988853 1 23579999999986533 567899999999999999999999
Q ss_pred CCHHHHHHHHHHhhhhcCCCHHHHhhccC-CCCC-CccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCc
Q 035820 100 IDASLISAAHDQIDNFFKLPTSRKLKAQR-MPGN-MWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGK 177 (382)
Q Consensus 100 I~~~l~~~~~~~~~~FF~lP~eeK~~~~~-~~~~-~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~ 177 (382)
|+.++++++++++++||+||.|+|+++.. .... ..||..... ..+...+|+|.+.+...|.. ...+.||.+
T Consensus 79 I~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~--~~~n~wP~~---- 151 (348)
T PLN02912 79 VPEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRLSTSFNV-SKEKVSNWRDFLRLHCYPIE--DFIEEWPST---- 151 (348)
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCcccccccccc-cccccCCchheEEEeecCcc--cccccCcch----
Confidence 99999999999999999999999999544 3222 333433221 12446789999987544432 235678864
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEe
Q 035820 178 DFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILH 257 (382)
Q Consensus 178 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~ 257 (382)
.+.||+++.+|+++|.+|+.+||++|+++|| |++++|.+.+....+.||++|||||+.++..+|+++|||+|+||||+
T Consensus 152 -~~~fr~~~~~y~~~~~~l~~~il~~la~~Lg-l~~~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~ 229 (348)
T PLN02912 152 -PISFREVTAEYATSVRALVLTLLEAISESLG-LEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLL 229 (348)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEE
Confidence 3789999999999999999999999999999 99999999888888899999999999988899999999999999999
Q ss_pred cCCCCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCC
Q 035820 258 QDQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICR 337 (382)
Q Consensus 258 qd~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~ 337 (382)
||+++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||++++.++|||++||++|+.|++|.|+++++++
T Consensus 230 Qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~ 309 (348)
T PLN02912 230 QDEVSGLQVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVIGPAQELINE 309 (348)
T ss_pred ECCCCceEEEECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCc
Confidence 99999999999999999999999999999999999999999999999998888899999999999999999999999987
Q ss_pred C--CCCCCCCCCHHHHHHHHHHhhhhhhhhHHHHHH
Q 035820 338 Q--GTRIYPDFTWSDLLEFTQKHYRSDYATLENFTK 371 (382)
Q Consensus 338 ~--~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 371 (382)
+ +|++|++++|+||+.....+...++..|+.|+.
T Consensus 310 ~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~ 345 (348)
T PLN02912 310 EEDSLAIYRNFTYAEYFEKFWDTAFATESCIDSFKA 345 (348)
T ss_pred CCCCCCCCCCCcHHHHHHHHHhcccCCcchhhhhhc
Confidence 5 489999999999999887777766777777764
No 10
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.4e-79 Score=595.02 Aligned_cols=327 Identities=33% Similarity=0.499 Sum_probs=284.8
Q ss_pred hhhhhccC--CCCCCCccCCCCCCCCC---CCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHH
Q 035820 30 DSSLWQKQ--TNLPVEFTWSKGDLVSS---HGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASL 104 (382)
Q Consensus 30 ~~~~~~~~--~~vP~~~i~p~~~~~~~---~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l 104 (382)
++++++++ ++||+.||+|++++|+. ....+||||||+.. .+.+++++|.+||++||||||+||||+.++
T Consensus 3 ~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~iPvIDls~~------~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l 76 (337)
T PLN02639 3 TKLLSTGIRHTTLPESYVRPESERPRLSEVSTCENVPVIDLGSP------DRAQVVQQIGDACRRYGFFQVINHGVSAEL 76 (337)
T ss_pred hhhhhhcCCcCcCCHHhcCCchhcccccccccCCCCCeEECCCc------cHHHHHHHHHHHHHhCCEEEEEcCCCCHHH
Confidence 45777776 89999999999998853 23457999999963 356789999999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCHHHHhhccCC-CCC-CccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhH
Q 035820 105 ISAAHDQIDNFFKLPTSRKLKAQRM-PGN-MWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQT 182 (382)
Q Consensus 105 ~~~~~~~~~~FF~lP~eeK~~~~~~-~~~-~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~f 182 (382)
++++++.+++||+||.|+|+++... ... ..+|.... ...+...+|+|.+.+...|.. ...+.||.. .+.|
T Consensus 77 ~~~~~~~~~~fF~LP~e~K~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~p~~--~~~n~wP~~-----~~~f 148 (337)
T PLN02639 77 VEKMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFN-VRKEKVHNWRDYLRLHCYPLD--KYVPEWPSN-----PPSF 148 (337)
T ss_pred HHHHHHHHHHHhcCCHHHHhhhhccCCCCccccccccc-cccCcccCchheEEeeecCCc--ccchhCccc-----chHH
Confidence 9999999999999999999997653 222 22332222 222345689999987655542 224678764 3789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecC-CC
Q 035820 183 GIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQD-QV 261 (382)
Q Consensus 183 r~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd-~~ 261 (382)
|+.+++|+++|.+|+.+||++|+++|| |++++|.+.+....+.||++|||+|+.++..+|+++|||+|+||||+|| ++
T Consensus 149 r~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v 227 (337)
T PLN02639 149 KEIVSTYCREVRELGFRLQEAISESLG-LEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQV 227 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCc
Confidence 999999999999999999999999999 9999999998888889999999999998889999999999999999998 49
Q ss_pred CceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCC
Q 035820 262 GGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTR 341 (382)
Q Consensus 262 ~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~ 341 (382)
+||||+++|+|++|+|.||++|||+||+||+||||+|||++|||++++.++|||++||++|+.|++|.|+++|+++++|+
T Consensus 228 ~GLQV~~~g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~ 307 (337)
T PLN02639 228 AGLQVLKDGKWVAVNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAA 307 (337)
T ss_pred CceEeecCCeEEeccCCCCeEEEechhHHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhhhhhhhHHHHHH
Q 035820 342 IYPDFTWSDLLEFTQKHYRSDYATLENFTK 371 (382)
Q Consensus 342 ~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 371 (382)
+|++++|+||++....+...++..|+.|++
T Consensus 308 ~y~p~~~~e~~~~~~~~~~~~~~~l~~~~~ 337 (337)
T PLN02639 308 VYRDFTYAEYYKKFWSRNLDQEHCLELFKN 337 (337)
T ss_pred CCCCCCHHHHHHHHHhccCCCchhhHhhcC
Confidence 999999999999887777777777887763
No 11
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=6.1e-79 Score=592.84 Aligned_cols=319 Identities=26% Similarity=0.385 Sum_probs=277.0
Q ss_pred hccCCCCCCCccCCCCCCCCC---CCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHH
Q 035820 34 WQKQTNLPVEFTWSKGDLVSS---HGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHD 110 (382)
Q Consensus 34 ~~~~~~vP~~~i~p~~~~~~~---~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~ 110 (382)
.++..+||.+|++|.+++|.. ....+||||||+.+..++ .+|.+++++|.+||++||||||+||||+.++++++++
T Consensus 9 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~-~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~ 87 (358)
T PLN02515 9 LAGESTLQSSFVRDEDERPKVAYNQFSDEIPVISLAGIDEVG-GRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTR 87 (358)
T ss_pred ccCCCcCCHHhcCCchhccCccccccCCCCCEEEChhccCCc-hHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHH
Confidence 345689999999999998854 123479999999986544 4678899999999999999999999999999999999
Q ss_pred HhhhhcCCCHHHHhhccCCCCCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHH
Q 035820 111 QIDNFFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYC 190 (382)
Q Consensus 111 ~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~ 190 (382)
++++||+||.|+|+++.......+||.........+..||+|.|.+...|.. ....+.||+.+ +.||+++++|+
T Consensus 88 ~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~~~~-~~~~n~WP~~~-----~~fr~~~~~y~ 161 (358)
T PLN02515 88 LARDFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVR-TRDYSRWPDKP-----EGWRAVTEEYS 161 (358)
T ss_pred HHHHHhcCCHHHHhhhCcCCCCccCcccccccccccccCceeeeccccCccc-ccccccccccc-----hHHHHHHHHHH
Confidence 9999999999999999775445679964332222346799999976544433 23357788643 78999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCCCCceEEEeCC
Q 035820 191 EAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGGLEVFANN 270 (382)
Q Consensus 191 ~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~~~g 270 (382)
++|.+|+.+||++|+++|| +++++|.+.+....+.+|++|||+|+.++..+|+++|||+|+||||+||+++||||+.++
T Consensus 162 ~~~~~L~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~ 240 (358)
T PLN02515 162 EKLMGLACKLLEVLSEAMG-LEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDG 240 (358)
T ss_pred HHHHHHHHHHHHHHHHhcC-CChhhHHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCceEEEECC
Confidence 9999999999999999999 999999998887778999999999999889999999999999999999999999998653
Q ss_pred --eEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCCH
Q 035820 271 --RWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTW 348 (382)
Q Consensus 271 --~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~ 348 (382)
+|++|+|.||++|||+||+||+||||+|||++|||++++..+||||+||++|+.|++|.|++ ++++++|++|+++||
T Consensus 241 ~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~-~~~~~~p~~y~~~t~ 319 (358)
T PLN02515 241 GKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVYPLK-VREGEKPILEEPITF 319 (358)
T ss_pred CCeEEECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEECCC-cCCCCCCCcCCCcCH
Confidence 79999999999999999999999999999999999998888999999999999999999997 667778999999999
Q ss_pred HHHHHHHHHhhhh
Q 035820 349 SDLLEFTQKHYRS 361 (382)
Q Consensus 349 ~e~~~~~~~~~~~ 361 (382)
+||+.....++..
T Consensus 320 ~eyl~~~~~~~~~ 332 (358)
T PLN02515 320 AEMYRRKMSRDLE 332 (358)
T ss_pred HHHHHHHHhcccc
Confidence 9998865544443
No 12
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.3e-78 Score=589.33 Aligned_cols=329 Identities=25% Similarity=0.378 Sum_probs=283.8
Q ss_pred chhhhhhccCCCCCCCccCCCCCCC----CC--CCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 28 LVDSSLWQKQTNLPVEFTWSKGDLV----SS--HGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 28 ~~~~~~~~~~~~vP~~~i~p~~~~~----~~--~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||+++.++ ..||+.|++|.+..+ .. ....+||||||+.+.++++..+. .+++|++||++||||||+||||+
T Consensus 8 ~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~~~~~~~~~~~-~~~~l~~A~~~~GFf~l~nHGI~ 85 (348)
T PLN00417 8 TVQEVVAAG-EGLPERYLHTPTGDGEGQPLNGAVPEMDIPAIDLSLLLSSSDDGRE-ELSKLHSALSTWGVVQVMNHGIT 85 (348)
T ss_pred hHHHHHhCC-CCCCccccCCcccccccccccccccCCCCCeEEChhhcCCCchHHH-HHHHHHHHHHHCCEEEEEcCCCC
Confidence 378887765 699999999998853 21 23458999999998876655444 46899999999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhh
Q 035820 102 ASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQ 181 (382)
Q Consensus 102 ~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~ 181 (382)
.++++++++.+++||+||.|+|+++....+..+||+...........||+|.+.+...|.. ....+.||..+ +.
T Consensus 86 ~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~n~wP~~~-----~~ 159 (348)
T PLN00417 86 EAFLDKIYKLTKQFFALPTEEKQKCAREIGSIQGYGNDMILSDDQVLDWIDRLYLTTYPED-QRQLKFWPQVP-----VG 159 (348)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCccccccccccccCCCcCccceeecccCCcc-ccccccccccc-----HH
Confidence 9999999999999999999999999875556789976432223456799999877654543 23357788643 78
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhcc-CceeEEeccCCCCCCCCCccccCCCCCCceeEEecC-
Q 035820 182 TGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEG-CSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQD- 259 (382)
Q Consensus 182 fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~-~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd- 259 (382)
||+.+.+|+++|.+|+.+||++|+++|| |++++|.+.+... .+.||++|||||+.++.++|+++|||+|+||||+||
T Consensus 160 fr~~~~~y~~~~~~l~~~ll~~la~~LG-l~~~~f~~~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~ 238 (348)
T PLN00417 160 FRETLHEYTMKQRLVIEKFFKAMARSLE-LEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDK 238 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhccCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecC
Confidence 9999999999999999999999999999 9999999988753 467999999999998889999999999999999996
Q ss_pred CCCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCC
Q 035820 260 QVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQG 339 (382)
Q Consensus 260 ~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~ 339 (382)
+++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++..+|||++||++|+.|++|+|+++++++++
T Consensus 239 ~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~ 318 (348)
T PLN00417 239 DVEGLQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIPGADKEIQPVDGLVSEAR 318 (348)
T ss_pred CCCceeEeECCeEEECCCCCCcEEEEcChHHHHHhCCeecccceEEecCCCCCEEEEEEEecCCCCceecCchHhcCCCC
Confidence 69999999999999999999999999999999999999999999999888889999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhhhhhHH
Q 035820 340 TRIYPDFTWSDLLEFTQKHYRSDYATLE 367 (382)
Q Consensus 340 p~~y~~~~~~e~~~~~~~~~~~~~~~~~ 367 (382)
|++|+++| +|++++++.+..++..++
T Consensus 319 p~~Y~~~~--~~~~~~~~~~~~~~~~~~ 344 (348)
T PLN00417 319 PRLYKTVK--KYVELFFKYYQQGRRPIE 344 (348)
T ss_pred CCCCCCHH--HHHHHHHHHHhcCcchhh
Confidence 99999999 666666777776655544
No 13
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=3.2e-78 Score=578.87 Aligned_cols=303 Identities=37% Similarity=0.591 Sum_probs=274.4
Q ss_pred CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCcc
Q 035820 56 GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWG 135 (382)
Q Consensus 56 ~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~G 135 (382)
...+||||||+.+...++ .+..++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++.+..+...|
T Consensus 14 ~~~~iPvIDls~~~~~~~-~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~g 92 (322)
T KOG0143|consen 14 SELDIPVIDLSCLDSDDP-GREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYRG 92 (322)
T ss_pred cCCCcCeEECCCCCCcch-hHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCccc
Confidence 356899999998876555 6788899999999999999999999999999999999999999999999999987666799
Q ss_pred ccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhh
Q 035820 136 YSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLH 215 (382)
Q Consensus 136 Y~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~ 215 (382)
|+...........+|+|.+.+...|.. ....+.||..+ +.||+++++|.+++.+|+..|+++|+++|| ++.++
T Consensus 93 Y~~~~~~~~~~~~~w~d~~~~~~~p~~-~~~~~~wp~~p-----~~~re~~~eY~~~~~~L~~~l~~~l~eslg-l~~~~ 165 (322)
T KOG0143|consen 93 YGTSFILSPLKELDWRDYLTLLSAPES-SFDPNLWPEGP-----PEFRETMEEYAKEVMELSEKLLRLLSESLG-LEPEY 165 (322)
T ss_pred ccccccccccccccchhheeeeccCcc-ccCcccCcccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHH
Confidence 988776644578899999987666653 24567788755 789999999999999999999999999999 98777
Q ss_pred HHHHhhc-cCceeEEeccCCCCCCCCCccccCCCCCCceeEEecC-CCCceEEE-eCCeEEEeccCCCceEEeccccccc
Q 035820 216 YREFFEE-GCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQD-QVGGLEVF-ANNRWQSVRPRDDALVINIGDTFTA 292 (382)
Q Consensus 216 ~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqv~-~~g~W~~V~p~pg~~vVnvGd~le~ 292 (382)
+.+.++. ....||+|||||||+|+.++|+++|||.|+||||+|| +++||||. ++|+|++|+|+||++|||+||+||+
T Consensus 166 ~~~~~~~~~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~ 245 (322)
T KOG0143|consen 166 LEKLFGETGGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQI 245 (322)
T ss_pred HHHhhCCccceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcccHHhH
Confidence 8888876 4669999999999999999999999999999999997 89999999 5999999999999999999999999
Q ss_pred ccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCCHHHHHHHHHHhhhhhhhhHH
Q 035820 293 LSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEFTQKHYRSDYATLE 367 (382)
Q Consensus 293 ~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~ 367 (382)
||||+|||++|||++|+.++|+|+|+|+.|..|++|.|++++|+++ |++|++++|.+|++++..++..++..++
T Consensus 246 lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~-~~~Y~~~~~~~y~~~~~~~~~~~~~~~~ 319 (322)
T KOG0143|consen 246 LSNGRYKSVLHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEE-PPKYKPFTFGDYLEFYFSKKLQGKTLLD 319 (322)
T ss_pred hhCCcccceEEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCC-CCccCcEEHHHHHHHHHhccccCcchhh
Confidence 9999999999999999988899999999999999999999999888 8889999999999998888877754443
No 14
>PLN02704 flavonol synthase
Probab=100.00 E-value=1.2e-77 Score=581.13 Aligned_cols=316 Identities=28% Similarity=0.424 Sum_probs=276.3
Q ss_pred hhhhhhcc--CCCCCCCccCCCCCCCCC-C---CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCH
Q 035820 29 VDSSLWQK--QTNLPVEFTWSKGDLVSS-H---GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDA 102 (382)
Q Consensus 29 ~~~~~~~~--~~~vP~~~i~p~~~~~~~-~---~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~ 102 (382)
++.++.++ ..+||.+|++|++++|+. . ...+||||||+.. + +.+++++|.+||++||||||+||||+.
T Consensus 6 ~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~iPvIDls~~---~---~~~~~~~l~~Ac~~~GFf~l~nHGI~~ 79 (335)
T PLN02704 6 VQAIASSSLLKETIPEEFIRSEKEQPAITTFHGVDPQVPTIDLSDP---D---EEKLTRLIAEASKEWGMFQIVNHGIPS 79 (335)
T ss_pred HHHHHhCCCCcCCCCHHHcCCcccccccccccccCCCCCeEECCCc---c---HHHHHHHHHHHHHHcCEEEEEcCCCCH
Confidence 56666654 789999999999999874 1 3457999999964 1 356788999999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCHHHHhhccCCC--CCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchh
Q 035820 103 SLISAAHDQIDNFFKLPTSRKLKAQRMP--GNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFE 180 (382)
Q Consensus 103 ~l~~~~~~~~~~FF~lP~eeK~~~~~~~--~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~ 180 (382)
++++++++.+++||+||.|+|+++.... ...+||........++..+|+|.+.....|.. ....+.||..+ +
T Consensus 80 ~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~~~d~~~~~~~p~~-~~~~n~wP~~~-----p 153 (335)
T PLN02704 80 EVISKLQKVGKEFFELPQEEKEVYAKPPDSKSIEGYGTKLQKEPEGKKAWVDHLFHRIWPPS-AINYQFWPKNP-----P 153 (335)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhccCCCcccccccccccccccCcccceeeeEeeecCCc-ccchhhCcccc-----c
Confidence 9999999999999999999999997643 23689976554444567789998765443432 22346788643 7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhcc--CceeEEeccCCCCCCCCCccccCCCCCCceeEEec
Q 035820 181 QTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEG--CSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQ 258 (382)
Q Consensus 181 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~--~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~q 258 (382)
.||+.+++|+++|.+|+.+||++|+++|| +++++|.+.+... .+.||++|||+|++++..+|+++|||+|+||||+|
T Consensus 154 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~q 232 (335)
T PLN02704 154 SYREVNEEYAKYLRGVADKLFKTLSLGLG-LEEDELKEAVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVP 232 (335)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhcCCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEec
Confidence 89999999999999999999999999999 9999999887643 45899999999999888999999999999999999
Q ss_pred CCCCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCC
Q 035820 259 DQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQ 338 (382)
Q Consensus 259 d~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~ 338 (382)
|+++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||++++..+||||+||++|+.|++|.|++++++++
T Consensus 233 d~v~GLQV~~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~ 312 (335)
T PLN02704 233 NEVQGLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINED 312 (335)
T ss_pred CCCCceeEeECCEEEeCCCCCCeEEEEechHHHHHhCCeeecccceeecCCCCCeEEEEEEecCCCCceEeCChHhcCCC
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHH
Q 035820 339 GTRIYPDFTWSDLLEFTQK 357 (382)
Q Consensus 339 ~p~~y~~~~~~e~~~~~~~ 357 (382)
+|++|++++|+||+.....
T Consensus 313 ~p~~Y~~~~~~e~~~~~~~ 331 (335)
T PLN02704 313 NPPKFKTKKFKDYVYCKLN 331 (335)
T ss_pred CCccCCCCCHHHHHHHHHh
Confidence 9999999999999875443
No 15
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=7.1e-77 Score=577.81 Aligned_cols=307 Identities=31% Similarity=0.494 Sum_probs=270.0
Q ss_pred CCCCCCccCCCCCCCCC-C--CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhh
Q 035820 38 TNLPVEFTWSKGDLVSS-H--GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDN 114 (382)
Q Consensus 38 ~~vP~~~i~p~~~~~~~-~--~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~ 114 (382)
.+||.+|++|++++|.. . ...+||||||+.+. ..++.+++++|++||++||||||+||||+.++++++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~---~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~ 78 (345)
T PLN02750 2 GEIDPAFIQAPEHRPKFHLTNSDEEIPVIDLSVST---SHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKE 78 (345)
T ss_pred CCCCHHHcCCchhccCccccccCCCCCeEECCCCC---cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHH
Confidence 47999999999998854 1 24579999999853 234678899999999999999999999999999999999999
Q ss_pred hcCCCHHHHhhccCCCCCCccccCCCCCccCCCCCceeceecccc-CCC-----CC------ccccccccCCCCcchhhH
Q 035820 115 FFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFD-DCS-----LN------PMVVNFFNSNIGKDFEQT 182 (382)
Q Consensus 115 FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~-p~~-----~~------~~~~~wP~~~~~~~~~~f 182 (382)
||+||.|+|+++.......+||.... ...+..||+|.|.++.. +.. .. ...+.||.+ .+.|
T Consensus 79 FF~LP~eeK~~~~~~~~~~~GY~~~~--~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~-----~~~f 151 (345)
T PLN02750 79 FFDQTTEEKRKVKRDEVNPMGYHDSE--HTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQN-----PSHF 151 (345)
T ss_pred HHcCCHHHHHhhccCCCCccCcCccc--ccccCCCceeEEEEeecccccccccccccccccccccccCCCC-----cHHH
Confidence 99999999999977544567996432 22345699999988753 210 00 013567754 3789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCCCC
Q 035820 183 GIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVG 262 (382)
Q Consensus 183 r~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~ 262 (382)
|+++++|++.|.+|+..||++|+++|| +++++|.+.+.+..+.||++|||||+.++..+|+++|||+|+||||+||+++
T Consensus 152 r~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~ 230 (345)
T PLN02750 152 RELCQEYARQVEKLAFKLLELISLSLG-LPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVG 230 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecCCCC
Confidence 999999999999999999999999999 9999999999988899999999999988889999999999999999999999
Q ss_pred ceEEE--eCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCC
Q 035820 263 GLEVF--ANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGT 340 (382)
Q Consensus 263 GLqv~--~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p 340 (382)
||||+ .+|+|++|+|.||++|||+||+||+||||+|||++|||+.++.++||||+||++|+.|++|.|+++++++++|
T Consensus 231 GLQV~~~~~g~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p 310 (345)
T PLN02750 231 GLQISRRSDGEWIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNP 310 (345)
T ss_pred ceEEeecCCCeEEEccCCCCeEEEEhHHHHHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCC
Confidence 99997 4799999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHH
Q 035820 341 RIYPDFTWSDLLEFT 355 (382)
Q Consensus 341 ~~y~~~~~~e~~~~~ 355 (382)
++|++++|+||+...
T Consensus 311 ~~y~p~~~~e~~~~~ 325 (345)
T PLN02750 311 PKYKEFNWGKFFASR 325 (345)
T ss_pred CccCCccHHHHHHHH
Confidence 999999999998743
No 16
>PLN02997 flavonol synthase
Probab=100.00 E-value=4.8e-75 Score=559.08 Aligned_cols=282 Identities=26% Similarity=0.411 Sum_probs=252.5
Q ss_pred CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCcc
Q 035820 56 GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWG 135 (382)
Q Consensus 56 ~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~G 135 (382)
...+||||||+.+ + +++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ...+|
T Consensus 29 ~~~~IPvIDls~~---~---~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~-~~~~G 101 (325)
T PLN02997 29 SAVDVPVVDLSVS---D---EDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKE-EDFEG 101 (325)
T ss_pred CCCCCCeEECCCC---C---HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-CCccc
Confidence 3558999999975 2 356889999999999999999999999999999999999999999999998764 34789
Q ss_pred ccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhh
Q 035820 136 YSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLH 215 (382)
Q Consensus 136 Y~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~ 215 (382)
|..... .+..||+|.+.....|.. ....+.||.++ +.||+++++|++.|.+|+.+||++|+++|| +++++
T Consensus 102 Y~~~~~---~~~~d~~e~~~~~~~p~~-~~~~n~wP~~~-----~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lg-l~~~~ 171 (325)
T PLN02997 102 YKRNYL---GGINNWDEHLFHRLSPPS-IINYKYWPKNP-----PQYREVTEEYTKHMKRLTEKILGWLSEGLG-LPRET 171 (325)
T ss_pred cCcccc---cCCCCccceeEeeecCcc-ccccccCCCCc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHH
Confidence 976543 355689998766544433 22356787543 789999999999999999999999999999 99999
Q ss_pred HHHHhhcc--CceeEEeccCCCCCCCCCccccCCCCCCceeEEecCCCCceEEEeCCeEEEeccCCCceEEecccccccc
Q 035820 216 YREFFEEG--CSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGGLEVFANNRWQSVRPRDDALVINIGDTFTAL 293 (382)
Q Consensus 216 ~~~~~~~~--~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~ 293 (382)
|.+.+... .+.||+||||+|+.++..+|+++|||+|+||||+||+++||||+++|+|++|+|.||++|||+||+||+|
T Consensus 172 f~~~~~~~~~~~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~ 251 (325)
T PLN02997 172 FTQSIGGETAEYVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIPNEVPGLQAFKDEQWLDLNYINSAVVVIIGDQLMRM 251 (325)
T ss_pred HHHHhcCCcccceeeeecCCCCCCcccccCccCccCCCceEEEecCCCCCEEEeECCcEEECCCCCCeEEEEechHHHHH
Confidence 99988743 3589999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred cCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCCHHHHHHH
Q 035820 294 SNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEF 354 (382)
Q Consensus 294 SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~ 354 (382)
|||+|||++|||+.++...|||++||++|+.|++|.|+++++++++|++|++++|+||+..
T Consensus 252 TNG~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~ 312 (325)
T PLN02997 252 TNGRFKNVLHRAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQ 312 (325)
T ss_pred hCCccccccceeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHH
Confidence 9999999999999888889999999999999999999999999999999999999999874
No 17
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=8.1e-75 Score=559.13 Aligned_cols=294 Identities=28% Similarity=0.413 Sum_probs=260.5
Q ss_pred CCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCC-CCCCcc
Q 035820 57 ELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRM-PGNMWG 135 (382)
Q Consensus 57 ~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~-~~~~~G 135 (382)
..+||||||+.+.++++.++.+++++|++||++||||||+||||+.++++++++++++||+||.|+|+++... ....+|
T Consensus 3 ~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~G 82 (320)
T PTZ00273 3 RASLPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHRG 82 (320)
T ss_pred CCCCCEEecHHhcCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCCC
Confidence 4579999999998878778889999999999999999999999999999999999999999999999998653 345789
Q ss_pred ccCCCCCcc--CCCCCceeceecccc-CCCCC--------ccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 035820 136 YSGAHADRF--CSKLPWKETLSFGFD-DCSLN--------PMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELL 204 (382)
Q Consensus 136 Y~~~~~~~~--~~~~d~kE~f~~~~~-p~~~~--------~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~l 204 (382)
|.+...+.. ....||+|.|.++.. |.... ...+.|| +.++.||+++++|+++|.+|+..||++|
T Consensus 83 Y~~~~~e~~~~~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP-----~~~p~fr~~~~~y~~~~~~l~~~ll~~l 157 (320)
T PTZ00273 83 YGAFGAEQLDPSKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHP-----TQVEGWMELMETHYRDMQALALVLLRAL 157 (320)
T ss_pred CCCccccccCCCCCCCccceEEeeccCCcccchhhccccccCCCCCC-----CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987654432 345799999998753 32211 1244555 4457899999999999999999999999
Q ss_pred HHHcCCCChhhHHHHhhccCceeEEeccCCCCC-CCCCccccCCCCCCceeEEecCCCCceEEE-eCCeEEEeccCCCce
Q 035820 205 AISLGINDRLHYREFFEEGCSIMRCNNYPTCQA-SDLALGTGPHCDPTSLTILHQDQVGGLEVF-ANNRWQSVRPRDDAL 282 (382)
Q Consensus 205 a~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~-~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~-~~g~W~~V~p~pg~~ 282 (382)
+++|| +++++|.+.+..+.+.||++|||+|+. ++..+|+++|||+|+||||+||.++||||+ .+|+|++|+|.||++
T Consensus 158 a~~Lg-l~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~g~Wi~V~p~pg~l 236 (320)
T PTZ00273 158 ALAIG-LREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQDSVGGLQVRNLSGEWMDVPPLEGSF 236 (320)
T ss_pred HHHhC-cCHHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEecCCCCceEEECCCCCEEeCCCCCCeE
Confidence 99999 999999999988888999999999987 457899999999999999999999999998 589999999999999
Q ss_pred EEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 035820 283 VINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEFTQK 357 (382)
Q Consensus 283 vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~ 357 (382)
|||+||+||+||||+|||++|||+. +..+|||++||++|+.|++|.|+++++++++|++|++++|+||+.....
T Consensus 237 vVNvGD~l~~~TnG~~kSt~HRVv~-~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~ 310 (320)
T PTZ00273 237 VVNIGDMMEMWSNGRYRSTPHRVVN-TGVERYSMPFFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFA 310 (320)
T ss_pred EEEHHHHHHHHHCCeeeCCCccccC-CCCCeEEEEEEEcCCCCceEecCccccCCCCcccCCceeHHHHHHHHHH
Confidence 9999999999999999999999974 4678999999999999999999999999999999999999999886543
No 18
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=5.3e-75 Score=558.29 Aligned_cols=302 Identities=25% Similarity=0.465 Sum_probs=262.7
Q ss_pred CCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCccc
Q 035820 57 ELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGY 136 (382)
Q Consensus 57 ~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY 136 (382)
..+||||||+.+.. .++.+++++|++||++||||||+|||||.++++++++++++||+||.|+|+++... .+||
T Consensus 4 ~~~iPvIDls~~~~---~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~---~~gy 77 (321)
T PLN02299 4 MESFPVIDMEKLNG---EERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVA---SKGL 77 (321)
T ss_pred CCCCCEEECcCCCc---ccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccC---CCCc
Confidence 45799999998843 24567889999999999999999999999999999999999999999999997543 3577
Q ss_pred cCCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhH
Q 035820 137 SGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHY 216 (382)
Q Consensus 137 ~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~ 216 (382)
.+...+ .+..||+|.|.++..|.. ..+.||..+ +.||+.+++|+++|.+|+.+||++|+++|| +++++|
T Consensus 78 ~~~~~~--~~~~d~ke~~~~~~~~~~---~~~~wP~~~-----~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f 146 (321)
T PLN02299 78 EGVQTE--VEDLDWESTFFLRHLPES---NLADIPDLD-----DEYRKVMKDFALELEKLAEELLDLLCENLG-LEKGYL 146 (321)
T ss_pred cccccc--CCCcCHHHHcccccCCcc---ccccCcccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHH
Confidence 644322 245689999987633332 245677543 789999999999999999999999999999 999999
Q ss_pred HHHhhc---cCceeEEeccCCCCCCCCCccccCCCCCCceeEEecC-CCCceEEEeCCeEEEeccCCCceEEeccccccc
Q 035820 217 REFFEE---GCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQD-QVGGLEVFANNRWQSVRPRDDALVINIGDTFTA 292 (382)
Q Consensus 217 ~~~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~ 292 (382)
.+.+.. ..+.||++|||||+.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+
T Consensus 147 ~~~~~~~~~~~~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~ 226 (321)
T PLN02299 147 KKAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEV 226 (321)
T ss_pred HHHhcCCCCccceeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHH
Confidence 988853 4557999999999998888999999999999999996 599999999999999999999999999999999
Q ss_pred ccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCC--CCCCCCCCCHHHHHHHHHHhhhhhh-hhHHHH
Q 035820 293 LSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQ--GTRIYPDFTWSDLLEFTQKHYRSDY-ATLENF 369 (382)
Q Consensus 293 ~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~--~p~~y~~~~~~e~~~~~~~~~~~~~-~~~~~~ 369 (382)
||||+|||+.|||+++...+|||++||++|+.|++|.|++++++++ +|++|++++|+||++.+.++....+ ..++++
T Consensus 227 ~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~~~~~~~~~ 306 (321)
T PLN02299 227 ITNGKYKSVMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPRFEAM 306 (321)
T ss_pred HhCCceecccceeecCCCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCCccchhhhh
Confidence 9999999999999998888999999999999999999999999875 5899999999999998887766654 668888
Q ss_pred HHhHhh
Q 035820 370 TKWLLT 375 (382)
Q Consensus 370 ~~~~~~ 375 (382)
+..-..
T Consensus 307 ~~~~~~ 312 (321)
T PLN02299 307 KAMETT 312 (321)
T ss_pred hccccc
Confidence 874333
No 19
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.6e-73 Score=551.22 Aligned_cols=292 Identities=26% Similarity=0.379 Sum_probs=250.9
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCcccc
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYS 137 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~ 137 (382)
.+||+|||+.. ++..++++|++||++||||||+||||+.++++++++++++||+||.|+|+++... ...+||.
T Consensus 13 ~~iP~IDl~~~------~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~-~~~~GY~ 85 (332)
T PLN03002 13 SSLNCIDLAND------DLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRN-EKHRGYT 85 (332)
T ss_pred CCCCEEeCCch------hHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccC-CCCCCcC
Confidence 36999999941 3456888999999999999999999999999999999999999999999999664 3478998
Q ss_pred CCCCCccC----CCCCceeceecccc-CCCCC------ccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035820 138 GAHADRFC----SKLPWKETLSFGFD-DCSLN------PMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAI 206 (382)
Q Consensus 138 ~~~~~~~~----~~~d~kE~f~~~~~-p~~~~------~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~ 206 (382)
+...+..+ ...||+|.|.++.. |.+.. ...+.||... ..+.||+++++|+++|.+|+..||++|++
T Consensus 86 ~~~~e~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~---~~p~fr~~~~~y~~~~~~l~~~ll~~la~ 162 (332)
T PLN03002 86 PVLDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDAD---VLPGWRETMEKYHQEALRVSMAIAKLLAL 162 (332)
T ss_pred cccccccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCc---ccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65544322 23699999998754 33211 1245666431 24789999999999999999999999999
Q ss_pred HcCCCChhhHHH--HhhccCceeEEeccCCCCCCC-CCccccCCCCCCceeEEecCCCCceEEEeC-----CeEEEeccC
Q 035820 207 SLGINDRLHYRE--FFEEGCSIMRCNNYPTCQASD-LALGTGPHCDPTSLTILHQDQVGGLEVFAN-----NRWQSVRPR 278 (382)
Q Consensus 207 ~Lg~l~~~~~~~--~~~~~~~~lr~~~Yp~~~~~~-~~~g~~~HtD~~~lTlL~qd~~~GLqv~~~-----g~W~~V~p~ 278 (382)
+|| |++++|.+ .++...+.||++|||+|+.++ ..+|+++|||+|+||||+||+++||||+.+ |+|++|+|+
T Consensus 163 ~Lg-l~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~ 241 (332)
T PLN03002 163 ALD-LDVGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPI 241 (332)
T ss_pred HcC-CChHHhccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCC
Confidence 999 99999986 445667889999999998765 479999999999999999999999999863 689999999
Q ss_pred CCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCCHHHHHHHHHHh
Q 035820 279 DDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEFTQKH 358 (382)
Q Consensus 279 pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~ 358 (382)
||++|||+||+||+||||+|||++|||+.++ .+||||+||+.|+.|++|.|+++++++++|++|++++|+||+......
T Consensus 242 pg~~VVNiGD~L~~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~~~ 320 (332)
T PLN03002 242 KGAFIVNLGDMLERWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQRYEE 320 (332)
T ss_pred CCeEEEEHHHHHHHHhCCeeECcCCeecCCC-CCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHHHHHH
Confidence 9999999999999999999999999998764 579999999999999999999999999999999999999999876554
Q ss_pred hhh
Q 035820 359 YRS 361 (382)
Q Consensus 359 ~~~ 361 (382)
...
T Consensus 321 ~~~ 323 (332)
T PLN03002 321 THA 323 (332)
T ss_pred Hhh
Confidence 433
No 20
>PLN02485 oxidoreductase
Probab=100.00 E-value=4.8e-73 Score=548.49 Aligned_cols=292 Identities=25% Similarity=0.367 Sum_probs=253.6
Q ss_pred CCCceeeCCCCCCC--C-----HHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCC-
Q 035820 58 LMEPVVDLEGFFRG--D-----EVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRM- 129 (382)
Q Consensus 58 ~~IPvIDls~l~~~--d-----~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~- 129 (382)
..||||||+.|.++ + +.++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 6 ~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~ 85 (329)
T PLN02485 6 KSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKIKMTP 85 (329)
T ss_pred CCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhcccC
Confidence 46999999998642 2 235678899999999999999999999999999999999999999999999998764
Q ss_pred CCCCccccCCCCCccCCCCCceeceecccc--CCCC------CccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 035820 130 PGNMWGYSGAHADRFCSKLPWKETLSFGFD--DCSL------NPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGIT 201 (382)
Q Consensus 130 ~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~--p~~~------~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll 201 (382)
....+||...+.+...+..||+|.|.+... +... ....+.||. ..+.||+.+++|+++|.+++.+||
T Consensus 86 ~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~-----~~~~fr~~~~~y~~~~~~l~~~ll 160 (329)
T PLN02485 86 AAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPE-----NPQEFKALMEEYIKLCTDLSRKIL 160 (329)
T ss_pred CCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCC-----ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 334689987655544567799999987642 2110 112456664 348899999999999999999999
Q ss_pred HHHHHHcCCCChhhHHHHh-hccCceeEEeccCCCCC----CCCCccccCCCCCCceeEEecC-CCCceEEE-eCCeEEE
Q 035820 202 ELLAISLGINDRLHYREFF-EEGCSIMRCNNYPTCQA----SDLALGTGPHCDPTSLTILHQD-QVGGLEVF-ANNRWQS 274 (382)
Q Consensus 202 ~~la~~Lg~l~~~~~~~~~-~~~~~~lr~~~Yp~~~~----~~~~~g~~~HtD~~~lTlL~qd-~~~GLqv~-~~g~W~~ 274 (382)
++|+++|| +++++|.+.+ .+..+.||++|||+|+. ++..+|+++|||+|+||||+|| +++||||+ ++|+|++
T Consensus 161 ~~~a~~Lg-l~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~ 239 (329)
T PLN02485 161 RGIALALG-GSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIW 239 (329)
T ss_pred HHHHHHcC-CChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEEE
Confidence 99999999 9999998765 45667899999999986 4568999999999999999997 58999998 5899999
Q ss_pred eccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccC--CCCCCCCCCCCHHHHH
Q 035820 275 VRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLIC--RQGTRIYPDFTWSDLL 352 (382)
Q Consensus 275 V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~--~~~p~~y~~~~~~e~~ 352 (382)
|+|.||++|||+||+||+||||+|||++|||+.++..+||||+||++|+.|++|.|++++++ +++|++|+++||+||+
T Consensus 240 V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~ 319 (329)
T PLN02485 240 AIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEHL 319 (329)
T ss_pred CCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCCCcEeHHHHH
Confidence 99999999999999999999999999999999888889999999999999999999999998 6789999999999998
Q ss_pred HHH
Q 035820 353 EFT 355 (382)
Q Consensus 353 ~~~ 355 (382)
...
T Consensus 320 ~~~ 322 (329)
T PLN02485 320 VNK 322 (329)
T ss_pred HHH
Confidence 754
No 21
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=1.1e-72 Score=544.05 Aligned_cols=299 Identities=26% Similarity=0.452 Sum_probs=252.2
Q ss_pred ccCCCCCCCccCCCCCCCCCCCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhh
Q 035820 35 QKQTNLPVEFTWSKGDLVSSHGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDN 114 (382)
Q Consensus 35 ~~~~~vP~~~i~p~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~ 114 (382)
+++..+|.+|+.| ..||||||+. ++ ..++|++||++||||||+||||+.++++++++++++
T Consensus 12 ~~~~~~~~~~~~~----------~~iPvIDls~-----~~----~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~ 72 (335)
T PLN02156 12 SNLYVNPKCKPVP----------VLIPVIDLTD-----SD----AKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIG 72 (335)
T ss_pred cccccCCcccCCC----------CCCCcccCCC-----hH----HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 3444556665533 3699999983 21 245899999999999999999999999999999999
Q ss_pred hcCCCHHHHhhccCCCCCCccccCCCCCccCCCCCceeceeccccCCC-CCccccccccCCCCcchhhHHHHHHHHHHHH
Q 035820 115 FFKLPTSRKLKAQRMPGNMWGYSGAHADRFCSKLPWKETLSFGFDDCS-LNPMVVNFFNSNIGKDFEQTGIIYQKYCEAM 193 (382)
Q Consensus 115 FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~-~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~ 193 (382)
||+||.|+|+++... ...||+...... ....+|+|.|.+...+.. .....+.||..+ +.||+++++|+++|
T Consensus 73 FF~LP~e~K~~~~~~--~~~Gy~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~wp~~p-----~~fr~~~~~Y~~~~ 144 (335)
T PLN02156 73 FFALPHSLKDKAGPP--DPFGYGTKRIGP-NGDVGWLEYILLNANLCLESHKTTAVFRHTP-----AIFREAVEEYMKEM 144 (335)
T ss_pred HHcCCHHHHhhcCCC--CCcccCccccCC-CCCCCceeeEeeecCCccccccchhcCcccc-----HHHHHHHHHHHHHH
Confidence 999999999998653 345886432221 234689999988755432 112356677532 67999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCC-hhhHHHHhh--ccCceeEEeccCCCCCC--CCCccccCCCCCCceeEEecCCCCceEEE-
Q 035820 194 KCLSLGITELLAISLGIND-RLHYREFFE--EGCSIMRCNNYPTCQAS--DLALGTGPHCDPTSLTILHQDQVGGLEVF- 267 (382)
Q Consensus 194 ~~l~~~ll~~la~~Lg~l~-~~~~~~~~~--~~~~~lr~~~Yp~~~~~--~~~~g~~~HtD~~~lTlL~qd~~~GLqv~- 267 (382)
.+|+.+||++|+++|| ++ +++|.+++. ...+.||+||||+|+.. +..+|+++|||+|+||||+||+++||||+
T Consensus 145 ~~L~~~ll~~la~~LG-l~~~~~f~~~~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~ 223 (335)
T PLN02156 145 KRMSSKVLEMVEEELK-IEPKEKLSKLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICV 223 (335)
T ss_pred HHHHHHHHHHHHHHcC-cCcHHHHHHHhcCCCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEe
Confidence 9999999999999999 96 478988875 34578999999999863 35799999999999999999999999997
Q ss_pred eCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCC
Q 035820 268 ANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFT 347 (382)
Q Consensus 268 ~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~ 347 (382)
++|+|++|+|.||++|||+||+||+||||+|||+.|||+.+..++||||+||+.|+.|++|.|++++|++++|++|++++
T Consensus 224 ~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~ 303 (335)
T PLN02156 224 KDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFT 303 (335)
T ss_pred CCCCEEEccCCCCcEEEEhHHHHHHHhCCeeeccceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCcc
Confidence 68999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhh
Q 035820 348 WSDLLEFTQKHYRS 361 (382)
Q Consensus 348 ~~e~~~~~~~~~~~ 361 (382)
|+||+.....+...
T Consensus 304 ~~ey~~~~~~~~~~ 317 (335)
T PLN02156 304 WSQYKLSAYKTKLG 317 (335)
T ss_pred HHHHHHHHHhccCC
Confidence 99999876554443
No 22
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=7e-72 Score=532.97 Aligned_cols=290 Identities=28% Similarity=0.397 Sum_probs=249.3
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCcccc
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYS 137 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~ 137 (382)
..||||||+.+. +.+++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... ...+||.
T Consensus 4 ~~iPvIDls~~~--------~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~-~~~~GY~ 74 (300)
T PLN02365 4 VNIPTIDLEEFP--------GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDV-ILGSGYM 74 (300)
T ss_pred CCCCEEEChhhH--------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCC-CCCCCCC
Confidence 469999999872 1247999999999999999999999999999999999999999999997543 2357997
Q ss_pred CCCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ChhhH
Q 035820 138 GAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGIN-DRLHY 216 (382)
Q Consensus 138 ~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l-~~~~~ 216 (382)
.... ..+|+|.|.+..... ....+.||..+ +..+.||+.+++|+++|.+|+.+||++|+++|| | ++++|
T Consensus 75 ~~~~-----~~~~~e~~~~~~~~~--~~~~~~~~~~~--~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~~f 144 (300)
T PLN02365 75 APSE-----VNPLYEALGLYDMAS--PQAVDTFCSQL--DASPHQRETIKKYAKAIHDLAMDLARKLAESLG-LVEGDFF 144 (300)
T ss_pred CcCC-----CCCchhheecccccC--chhhhhccccC--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCChHHH
Confidence 6433 246899887652111 11234565421 334789999999999999999999999999999 9 88888
Q ss_pred HHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecC-CCCceEEEe--CCeEEEeccCCCceEEecccccccc
Q 035820 217 REFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQD-QVGGLEVFA--NNRWQSVRPRDDALVINIGDTFTAL 293 (382)
Q Consensus 217 ~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqv~~--~g~W~~V~p~pg~~vVnvGd~le~~ 293 (382)
.+. .+.||++|||+|+.++..+|+++|||+|+||||+|| +++||||+. +|+|++|+|.||++|||+||+||+|
T Consensus 145 ~~~----~~~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~ 220 (300)
T PLN02365 145 QGW----PSQFRINKYNFTPETVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAW 220 (300)
T ss_pred hhc----ccceeeeecCCCCCccccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHH
Confidence 763 478999999999998889999999999999999998 499999986 6899999999999999999999999
Q ss_pred cCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCCHHHHHHHHHHhhhhhhhhHHHHH
Q 035820 294 SNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEFTQKHYRSDYATLENFT 370 (382)
Q Consensus 294 SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~ 370 (382)
|||+|||++|||+.++..+||||+||+.|+.|++|.|+++++++++|++|++++|+||+.............+.+|.
T Consensus 221 TNG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~ 297 (300)
T PLN02365 221 SNGRLCNVKHRVQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEALALIT 297 (300)
T ss_pred hCCceecccceeEcCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhccccccchHhhhh
Confidence 99999999999998888899999999999999999999999999999999999999999987777766666666554
No 23
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=3.8e-71 Score=507.64 Aligned_cols=283 Identities=31% Similarity=0.405 Sum_probs=258.1
Q ss_pred CCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCC-CCcc
Q 035820 57 ELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPG-NMWG 135 (382)
Q Consensus 57 ~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~-~~~G 135 (382)
+..||+|||+.+..+|+.+|..++++|++||++||||||+||||+.++++++++++++||+||.|+|+++.+..+ ..+|
T Consensus 3 ~~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~rG 82 (322)
T COG3491 3 TRDLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHRG 82 (322)
T ss_pred CCcCceeccHHhcCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCccccc
Confidence 457999999999888888999999999999999999999999999999999999999999999999999998554 5899
Q ss_pred ccCCCCCccCCCCCceeceecccc-CC-C-C------CccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035820 136 YSGAHADRFCSKLPWKETLSFGFD-DC-S-L------NPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAI 206 (382)
Q Consensus 136 Y~~~~~~~~~~~~d~kE~f~~~~~-p~-~-~------~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~ 206 (382)
|...+.+..++..||||.|+++.+ +. . + ...+|.|| ..|+||+.+..|+++|.+++.+||++||.
T Consensus 83 Y~~~~~E~t~g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP------~ip~~r~~ll~~~~~~~~~~~rLL~aiA~ 156 (322)
T COG3491 83 YTPHGGELTDGEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP------AIPGLRDALLQYYRAMTAVGLRLLRAIAL 156 (322)
T ss_pred cccCcccccCCccchhhhcccccccccccCCCccCCCcCCCCCCc------cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888888899999999865 21 1 0 12355566 34899999999999999999999999999
Q ss_pred HcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCCCCceEEEeC-CeEEEeccCCCceEEe
Q 035820 207 SLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGGLEVFAN-NRWQSVRPRDDALVIN 285 (382)
Q Consensus 207 ~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~~~-g~W~~V~p~pg~~vVn 285 (382)
+|+ |++++|...+.++.++||+++||+.+..+...|.++|||+|+||||+||.++||||+.. |+|++|+|.||++|||
T Consensus 157 ~Ld-L~~d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~g~Wl~v~P~pgtlvVN 235 (322)
T COG3491 157 GLD-LPEDFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNGGWLDVPPIPGTLVVN 235 (322)
T ss_pred HcC-CChhhhhhccCCchheEEEEecCCCcccccccccccccCCCeEEEEEecccCCeEEecCCCCeeECCCCCCeEEEe
Confidence 999 99999999999999999999999999988889999999999999999999999999965 9999999999999999
Q ss_pred cccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCC-CccCCCCCCCCCCC
Q 035820 286 IGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQ-DLICRQGTRIYPDF 346 (382)
Q Consensus 286 vGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~-~~v~~~~p~~y~~~ 346 (382)
+||+||+||||+|+||+|||+.++..+||||+||+.|+.|+.|.|+. ...+..++++|.+-
T Consensus 236 iGdmLe~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~Pl~~l~~~~a~~~~~~~t 297 (322)
T COG3491 236 IGDMLERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIAPLLPLCPEAANEPRGPGT 297 (322)
T ss_pred HHHHHHHHhCCeeccccceeecCCCccceeeeeeccCCCCccccccCCCCcccccCCcCCCC
Confidence 99999999999999999999999888999999999999999999865 44566778887775
No 24
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=1.3e-70 Score=523.13 Aligned_cols=288 Identities=25% Similarity=0.459 Sum_probs=244.5
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCccccC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSG 138 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~ 138 (382)
+||||||+.+.. .+|++++++|++||++||||||+||||+.++++++++.+++||+||.|+|.. ..... .++..
T Consensus 2 ~iPvIDls~~~~---~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~-~~~~~--~~~~~ 75 (303)
T PLN02403 2 EIPVIDFDQLDG---EKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFY-ESEIA--KALDN 75 (303)
T ss_pred CCCeEeCccCCc---ccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhh-ccccc--Ccccc
Confidence 699999998853 3467889999999999999999999999999999999999999999999962 22111 12211
Q ss_pred CCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHH
Q 035820 139 AHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYRE 218 (382)
Q Consensus 139 ~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~ 218 (382)
.. ..+..||+|.|.++..|.. ..+.||+.+ +.||+.+++|+++|.+|+..|+++|+++|| +++++|.+
T Consensus 76 ~~---~~~~~d~kE~~~~~~~p~~---~~~~wP~~~-----p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~ 143 (303)
T PLN02403 76 EG---KTSDVDWESSFFIWHRPTS---NINEIPNLS-----EDLRKTMDEYIAQLIKLAEKLSELMSENLG-LDKDYIKE 143 (303)
T ss_pred cC---CCCCccHhhhcccccCCcc---chhhCCCCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHH
Confidence 11 1235699999988755542 356788643 789999999999999999999999999999 99999998
Q ss_pred Hhh---ccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecC-CCCceEEEeCCeEEEeccCC-CceEEecccccccc
Q 035820 219 FFE---EGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQD-QVGGLEVFANNRWQSVRPRD-DALVINIGDTFTAL 293 (382)
Q Consensus 219 ~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqv~~~g~W~~V~p~p-g~~vVnvGd~le~~ 293 (382)
.+. ...+.||++|||+|+.++..+|+++|||+|+||||+|+ +++||||+++|+|++|+|.| |++|||+||+||+|
T Consensus 144 ~~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~ 223 (303)
T PLN02403 144 AFSGNKGPSVGTKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVL 223 (303)
T ss_pred HhccCCCccceeeeEcCCCCCCcccccCccCccCCCeEEEEEecCCCCceEeccCCeEEECCCCCCCEEEEEehHHHHHH
Confidence 886 33456999999999988888999999999999999997 59999999999999999999 69999999999999
Q ss_pred cCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCC-CCCHHHHHHHHHHhhhhh-hhhHHHHHH
Q 035820 294 SNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYP-DFTWSDLLEFTQKHYRSD-YATLENFTK 371 (382)
Q Consensus 294 SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~-~~~~~e~~~~~~~~~~~~-~~~~~~~~~ 371 (382)
|||+|||++|||+++.+++|||++||++|+.|++|.|+++++. + ++||+||++.+..+.... +..+++|+.
T Consensus 224 Tng~~~S~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~-------~~~~~~~eyl~~~~~~~~~~~~~~~~~~~~ 296 (303)
T PLN02403 224 SNGRYKSTLHRVMADKNGSRLSIATFYNPAGDAIISPAPKLLY-------PSNYRFQDYLKLYSTTKFGDKGPRFESMKK 296 (303)
T ss_pred hCCeeecccceeecCCCCCEEEEEEEEcCCCCCeEeCchhhCC-------CCCccHHHHHHHHHHhccccccchHHHhhh
Confidence 9999999999999888889999999999999999999998863 3 499999999877634443 555777664
No 25
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.3e-70 Score=528.99 Aligned_cols=288 Identities=27% Similarity=0.502 Sum_probs=241.9
Q ss_pred CCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccC-CCC--CC
Q 035820 57 ELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQR-MPG--NM 133 (382)
Q Consensus 57 ~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~-~~~--~~ 133 (382)
..+||+|||+.+. +++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.. ... ..
T Consensus 36 ~~~IPvIDls~~~----------~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~ 105 (341)
T PLN02984 36 DIDIPVIDMECLD----------MEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYF 105 (341)
T ss_pred cCCCCeEeCcHHH----------HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccc
Confidence 4569999999651 3689999999999999999999999999999999999999999999852 211 12
Q ss_pred ccccCCCCC---c----cCCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 035820 134 WGYSGAHAD---R----FCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAI 206 (382)
Q Consensus 134 ~GY~~~~~~---~----~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~ 206 (382)
.||...... . ..+..||+|.|.++..+.. ..+.||. .++.++.||+++++|+++|.+|+..||++||+
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~D~kE~f~~~~~~~~---~~~~~p~--~~~~~p~fr~~~~~y~~~~~~La~~ll~~lA~ 180 (341)
T PLN02984 106 WGTPALTPSGKALSRGPQESNVNWVEGFNIPLSSLS---LLQTLSC--SDPKLESFRVLMEEYGKHLTRIAVTLFEAIAK 180 (341)
T ss_pred cCcccccccccccccccccCCCCeeeEEeCcCCchh---hhhhcCC--CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233211111 0 0125699999988643221 1233543 22456889999999999999999999999999
Q ss_pred HcCCCC--hhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCCCCceEEEeCCeEEEeccCCCceEE
Q 035820 207 SLGIND--RLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGGLEVFANNRWQSVRPRDDALVI 284 (382)
Q Consensus 207 ~Lg~l~--~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~~~g~W~~V~p~pg~~vV 284 (382)
+|| ++ +++|.+++....+.||++|||||+.++..+|+++|||+|+||||+||+++||||+++|+|++|+|+||++||
T Consensus 181 ~Lg-l~~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd~v~GLQV~~~g~Wv~V~p~pgalVV 259 (341)
T PLN02984 181 TLS-LELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDEVGGLEVMKDGEWFNVKPIANTLVV 259 (341)
T ss_pred HcC-CCcchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEeCCCCCeeEeeCCceEECCCCCCeEEE
Confidence 999 99 999999998888899999999999888889999999999999999999999999999999999999999999
Q ss_pred ecccccccccCCeecCcccccc-cCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCCHHHHHHHHHHhhhhhh
Q 035820 285 NIGDTFTALSNGKYMSCLHRAV-VNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEFTQKHYRSDY 363 (382)
Q Consensus 285 nvGd~le~~SnG~~kS~~HRV~-~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~ 363 (382)
|+||+||+||||+|||++|||+ .+..++|||++||++|+.|++|. |++|++++|+||+......++..+
T Consensus 260 NiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~----------p~~y~p~t~~e~l~~~~~~~~~~~ 329 (341)
T PLN02984 260 NLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIK----------SSKYKPFTYSDFEAQVQLDVKTLG 329 (341)
T ss_pred ECChhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEc----------cCCcCcccHHHHHHHHHhhhhccC
Confidence 9999999999999999999996 46678899999999999999996 468999999999998777776554
Q ss_pred hh--HHHHH
Q 035820 364 AT--LENFT 370 (382)
Q Consensus 364 ~~--~~~~~ 370 (382)
.. |+.||
T Consensus 330 ~~~~~~~~~ 338 (341)
T PLN02984 330 SKVGLSRFK 338 (341)
T ss_pred Cccccccee
Confidence 44 56554
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=8.8e-64 Score=466.89 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=222.0
Q ss_pred HHHHhhhhcC-CCHHHHhhccCCCC--CCccccCCCCC--ccCCCCCceeceeccccCCCCCccccccccCCCCcchhhH
Q 035820 108 AHDQIDNFFK-LPTSRKLKAQRMPG--NMWGYSGAHAD--RFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQT 182 (382)
Q Consensus 108 ~~~~~~~FF~-lP~eeK~~~~~~~~--~~~GY~~~~~~--~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~f 182 (382)
+.+.+++||+ ||.|+|+++....+ ..+||+..... ...+..||+|.|.+...|.. ....+.||.++ +.|
T Consensus 1 ~~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~~~d~kE~~~~~~~p~~-~~~~n~wP~~~-----~~f 74 (262)
T PLN03001 1 MRSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHHTFPLS-RRNPSHWPDFP-----PDY 74 (262)
T ss_pred ChHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccccCCCCccCchheeEeeecCcc-ccchhhCCCCc-----HHH
Confidence 3578899997 99999999987543 36799654332 12345699999988655543 23467788653 789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCCCC
Q 035820 183 GIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVG 262 (382)
Q Consensus 183 r~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~ 262 (382)
|+++++|+++|.+|+.+||++|+++|| +++++|.+.+....+.||++|||+|+.++..+|+++|||+|+||||+||+++
T Consensus 75 ~~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~ 153 (262)
T PLN03001 75 REVVGEYGDCMKALAQKLLAFISESLG-LPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQDDVE 153 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCeeEEEEeCCCC
Confidence 999999999999999999999999999 9999999998877788999999999998889999999999999999999999
Q ss_pred ceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCC
Q 035820 263 GLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRI 342 (382)
Q Consensus 263 GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~ 342 (382)
||||+++|+|++|+|.||++||||||+||+||||+|||++|||+++..++||||+||++|+.|++|.|+++++++++|++
T Consensus 154 GLqV~~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~p~~e~v~~~~p~~ 233 (262)
T PLN03001 154 GLQLLKDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTAKIAPASALSTESFPPR 233 (262)
T ss_pred ceEEeeCCeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCCEEeCChHhcCCCCCCc
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhhhhhhhHH
Q 035820 343 YPDFTWSDLLEFTQKHYRSDYATLE 367 (382)
Q Consensus 343 y~~~~~~e~~~~~~~~~~~~~~~~~ 367 (382)
|++++|+||+.....++..++..++
T Consensus 234 y~~~~~~e~l~~~~~~~~~~~~~~~ 258 (262)
T PLN03001 234 YCEIVYGEYVSSWYSKGPEGKRNID 258 (262)
T ss_pred CCCccHHHHHHHHHHhccCCcchhh
Confidence 9999999999876666655444443
No 27
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.92 E-value=3.4e-25 Score=182.50 Aligned_cols=109 Identities=31% Similarity=0.462 Sum_probs=90.8
Q ss_pred CceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCccccCC
Q 035820 60 EPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSGA 139 (382)
Q Consensus 60 IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~ 139 (382)
||||||+. +...|.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.+. ...+||.+.
T Consensus 1 iPvIDls~----~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~ 75 (116)
T PF14226_consen 1 IPVIDLSP----DPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARS-PSYRGYSPP 75 (116)
T ss_dssp --EEEHGG----CHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCC-TTCSEEEES
T ss_pred CCeEECCC----CCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCC-CCCcccccC
Confidence 79999997 5678999999999999999999999999999999999999999999999999999665 478999988
Q ss_pred CCCccCC-CCCceeceecccc-CCCC-----CccccccccC
Q 035820 140 HADRFCS-KLPWKETLSFGFD-DCSL-----NPMVVNFFNS 173 (382)
Q Consensus 140 ~~~~~~~-~~d~kE~f~~~~~-p~~~-----~~~~~~wP~~ 173 (382)
+.+...+ ..||+|+|.++.. |.+. ....|.||.+
T Consensus 76 ~~~~~~~~~~d~~E~~~~~~~~~~~~p~~~~~~~~n~WP~~ 116 (116)
T PF14226_consen 76 GSESTDGGKPDWKESFNIGPDLPEDDPAYPPLYGPNIWPDE 116 (116)
T ss_dssp EEECCTTCCCCSEEEEEEECC-STTCHHTGCTS-GGGS-TT
T ss_pred CccccCCCCCCceEEeEEECCCCccccccccccCCCCCCCC
Confidence 7766665 8999999999876 4331 2456778753
No 28
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.91 E-value=3.2e-25 Score=177.15 Aligned_cols=95 Identities=45% Similarity=0.784 Sum_probs=76.9
Q ss_pred ceeEEeccCCCCCCCCCccccCCCCC--CceeEEecCCCCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcc
Q 035820 225 SIMRCNNYPTCQASDLALGTGPHCDP--TSLTILHQDQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCL 302 (382)
Q Consensus 225 ~~lr~~~Yp~~~~~~~~~g~~~HtD~--~~lTlL~qd~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~ 302 (382)
+.||+++||+ ++...|+++|+|. +++|+|+|++++|||+..+++|+.|++.++.++||+||+|++||||.++|+.
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~ 78 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATL 78 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecccchheeccccccccCccCccceeeeeceeeeecccCCccCCce
Confidence 5699999998 5678899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEEeeecC
Q 035820 303 HRAVVNRFTERRSLAFFLCP 322 (382)
Q Consensus 303 HRV~~~~~~~R~Si~~F~~P 322 (382)
|||+......|+|++||++|
T Consensus 79 HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 79 HRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp EEEE--STS-EEEEEEEEE-
T ss_pred eeeEcCCCCCEEEEEEEECC
Confidence 99998888999999999987
No 29
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.90 E-value=2.1e-23 Score=171.99 Aligned_cols=110 Identities=24% Similarity=0.386 Sum_probs=92.8
Q ss_pred chhhhhhccCCCCCCCccCCCCCCCCC---CCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHH
Q 035820 28 LVDSSLWQKQTNLPVEFTWSKGDLVSS---HGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASL 104 (382)
Q Consensus 28 ~~~~~~~~~~~~vP~~~i~p~~~~~~~---~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l 104 (382)
.++.+.. ...+|..|+++.+++|.. ....+||||||+.+.+++ ..+.+++++|++||++||||||+||||+.++
T Consensus 5 ~~~~l~~--~~~~p~~~~~~~~~~p~~~~~~~~~~iPvIDls~~~~~~-~~~~~~~~~L~~A~~~~GFf~l~nhGi~~el 81 (120)
T PLN03176 5 TLTALAE--EKTLQASFVRDEDERPKVAYNQFSNEIPVISIAGIDDGG-EKRAEICNKIVEACEEWGVFQIVDHGVDAKL 81 (120)
T ss_pred HHHHHhc--cCCCCHhhcCChhhCcCccccccCCCCCeEECccccCCc-hHHHHHHHHHHHHHHHCCEEEEECCCCCHHH
Confidence 3444433 379999999999998843 123479999999997665 4577889999999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCHHHHhhccCCCCCCccccCCC
Q 035820 105 ISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSGAH 140 (382)
Q Consensus 105 ~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~ 140 (382)
++++++.+++||+||.|+|+++...++...||+..+
T Consensus 82 id~~~~~~~~FF~LP~e~K~k~~~~~~~~~gy~~~~ 117 (120)
T PLN03176 82 VSEMTTLAKEFFALPPEEKLRFDMSGGKKGGFIVSS 117 (120)
T ss_pred HHHHHHHHHHHHCCCHHHHHhcccCCCccCCcchhc
Confidence 999999999999999999999988766778997653
No 30
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.29 E-value=0.0025 Score=50.41 Aligned_cols=78 Identities=32% Similarity=0.436 Sum_probs=53.6
Q ss_pred eEEeccCCCCCCCCCccccCCCCC-----CceeEEec--CC-----CCceEEEe----CCeEEEec-----cCCCceEEe
Q 035820 227 MRCNNYPTCQASDLALGTGPHCDP-----TSLTILHQ--DQ-----VGGLEVFA----NNRWQSVR-----PRDDALVIN 285 (382)
Q Consensus 227 lr~~~Yp~~~~~~~~~g~~~HtD~-----~~lTlL~q--d~-----~~GLqv~~----~g~W~~V~-----p~pg~~vVn 285 (382)
|++++|++ .-.+.+|+|. ..+|+|+. +. .+.|++.. ++....+. |.+|.+|+.
T Consensus 1 ~~~~~y~~------G~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPP------GGFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEET------TEEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECc------CCEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 46777865 3357899998 58888854 22 25677763 45566666 999998877
Q ss_pred cccccccccCCeecCcccccccC-CCCCeEEEEeeec
Q 035820 286 IGDTFTALSNGKYMSCLHRAVVN-RFTERRSLAFFLC 321 (382)
Q Consensus 286 vGd~le~~SnG~~kS~~HRV~~~-~~~~R~Si~~F~~ 321 (382)
-+ ...+|+|... ....|+++.+|+.
T Consensus 75 ~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 75 PS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp ES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 55 3568999766 6788999999873
No 31
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=95.72 E-value=0.14 Score=44.84 Aligned_cols=105 Identities=21% Similarity=0.144 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCC--------ceeEEec--C--CCCc
Q 035820 196 LSLGITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPT--------SLTILHQ--D--QVGG 263 (382)
Q Consensus 196 l~~~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~--------~lTlL~q--d--~~~G 263 (382)
+...|.+.+...++ ++.. .......+++.+|.+- -...+|.|.. .+|+++. | ..|.
T Consensus 60 ~~~~l~~~i~~~~~-~~~~-----~~~~~~~~~~~~Y~~g------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~ 127 (178)
T smart00702 60 VIERIRQRLADFLG-LLRG-----LPLSAEDAQVARYGPG------GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGE 127 (178)
T ss_pred HHHHHHHHHHHHHC-CCch-----hhccCcceEEEEECCC------CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCce
Confidence 44455566666666 5421 1123445888899762 2467899966 6888875 3 2344
Q ss_pred eEEEeCC--eEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeec
Q 035820 264 LEVFANN--RWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLC 321 (382)
Q Consensus 264 Lqv~~~g--~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~ 321 (382)
|.+...+ .-..|.|..|.+||.-... +..+|.|..-....|+++..+++
T Consensus 128 ~~f~~~~~~~~~~v~P~~G~~v~f~~~~---------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 128 LVFPGLGLMVCATVKPKKGDLLFFPSGR---------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred EEecCCCCccceEEeCCCCcEEEEeCCC---------CCccccCCcceeCCEEEEEEEEC
Confidence 6665544 3678999999888754221 16789997665678999988764
No 32
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=94.36 E-value=0.33 Score=44.47 Aligned_cols=49 Identities=20% Similarity=0.163 Sum_probs=35.6
Q ss_pred CCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeec
Q 035820 261 VGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLC 321 (382)
Q Consensus 261 ~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~ 321 (382)
.|.|.+.....=..|+|..|.+||.-. +.+|+|..-....|+++.+..+
T Consensus 129 GGEl~~~~~~g~~~Vkp~aG~~vlfps------------~~lH~v~pVt~G~R~~~~~Wi~ 177 (226)
T PRK05467 129 GGELVIEDTYGEHRVKLPAGDLVLYPS------------TSLHRVTPVTRGVRVASFFWIQ 177 (226)
T ss_pred CCceEEecCCCcEEEecCCCeEEEECC------------CCceeeeeccCccEEEEEecHH
Confidence 455877644333678888888887764 4789997656778999988764
No 33
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=91.44 E-value=2.6 Score=36.93 Aligned_cols=70 Identities=20% Similarity=0.155 Sum_probs=46.9
Q ss_pred CccccCCCCC----CceeEEec----CCCCceEEEeC----CeEEEeccCCCceEEecccccccccCCeecCcccccccC
Q 035820 241 ALGTGPHCDP----TSLTILHQ----DQVGGLEVFAN----NRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVN 308 (382)
Q Consensus 241 ~~g~~~HtD~----~~lTlL~q----d~~~GLqv~~~----g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~ 308 (382)
......|.|. ...|++.. |..+|+.+... ..=+.|.+.+|++++..|-.+ .|-|..-
T Consensus 84 nr~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~~~-----------~Hgvtpv 152 (171)
T PF12851_consen 84 NRCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAKRE-----------LHGVTPV 152 (171)
T ss_pred ecCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEcccce-----------eeecCcc
Confidence 3457789998 77777765 23466666533 133677889999998888544 3555321
Q ss_pred -----CCCCeEEEEeeec
Q 035820 309 -----RFTERRSLAFFLC 321 (382)
Q Consensus 309 -----~~~~R~Si~~F~~ 321 (382)
...+|+|++||.+
T Consensus 153 ~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 153 ESPNRNHGTRISLVFYQH 170 (171)
T ss_pred cCCCCCCCeEEEEEEEeE
Confidence 2478999999975
No 34
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=86.05 E-value=3.6 Score=37.04 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=30.7
Q ss_pred CeEEEeccCCCceEEecccccccccCCeecCcccccccCC-CCCeEEEEeee
Q 035820 270 NRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNR-FTERRSLAFFL 320 (382)
Q Consensus 270 g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~-~~~R~Si~~F~ 320 (382)
..|+.|.|.+|.+|+.-+. ..|+|..+. +.+|+||+|=+
T Consensus 159 ~~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 159 QRFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred CccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEee
Confidence 4688899999999977653 359998765 57899999844
No 35
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=82.41 E-value=38 Score=30.74 Aligned_cols=77 Identities=16% Similarity=0.079 Sum_probs=46.4
Q ss_pred eeEEeccCCCCCCCCCccccCCCCCC-------ceeEEecCCCCceEEE---eCCeEEEeccCCCceEEecccccccccC
Q 035820 226 IMRCNNYPTCQASDLALGTGPHCDPT-------SLTILHQDQVGGLEVF---ANNRWQSVRPRDDALVINIGDTFTALSN 295 (382)
Q Consensus 226 ~lr~~~Yp~~~~~~~~~g~~~HtD~~-------~lTlL~qd~~~GLqv~---~~g~W~~V~p~pg~~vVnvGd~le~~Sn 295 (382)
..-+|+|.+- . +++.|.|-. ++.|=+-+ ..=+++. +++.+..+.-..|.++|.-|++ +.
T Consensus 117 a~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvSLG~-~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~--- 185 (213)
T PRK15401 117 ACLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVSLGL-PAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RL--- 185 (213)
T ss_pred EEEEEeccCc-----C-ccccccCCCcccCCCCEEEEeCCC-CeEEEecccCCCCceEEEEeCCCCEEEECchH-hh---
Confidence 4668999862 3 799999942 12222211 1122222 3456899999999999998885 32
Q ss_pred CeecCcccccccCC-------CCCeEEEEe
Q 035820 296 GKYMSCLHRAVVNR-------FTERRSLAF 318 (382)
Q Consensus 296 G~~kS~~HRV~~~~-------~~~R~Si~~ 318 (382)
..|.|.... +..|+|+.|
T Consensus 186 -----~~HgVp~~~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 186 -----RYHGILPLKAGEHPLTGECRINLTF 210 (213)
T ss_pred -----eeccCCcCCCCcCCCCCCCeEEEEe
Confidence 235553211 236999987
No 36
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=71.72 E-value=5 Score=31.58 Aligned_cols=37 Identities=27% Similarity=0.295 Sum_probs=23.3
Q ss_pred CeEEEeccCCCceEEecccccccccCCeecCcccccccCC-CCCeEEEEe
Q 035820 270 NRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNR-FTERRSLAF 318 (382)
Q Consensus 270 g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~-~~~R~Si~~ 318 (382)
..++.++|.+|.+||.-+.+ .|+|..+. +.+|+||+|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~l------------~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSWL------------WHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETTS------------EEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCCC------------EEeccCcCCCCCEEEEEc
Confidence 57888999999999988743 59987654 468999987
No 37
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=69.51 E-value=6.8 Score=34.48 Aligned_cols=78 Identities=19% Similarity=0.191 Sum_probs=43.4
Q ss_pred ceeEEeccCCCCCCCCCccccCCCCCCce-------eEEecCCCCceEEEe---CCeEEEeccCCCceEEeccccccccc
Q 035820 225 SIMRCNNYPTCQASDLALGTGPHCDPTSL-------TILHQDQVGGLEVFA---NNRWQSVRPRDDALVINIGDTFTALS 294 (382)
Q Consensus 225 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~~l-------TlL~qd~~~GLqv~~---~g~W~~V~p~pg~~vVnvGd~le~~S 294 (382)
...-+|+|.+ .. ++++|.|...+ ||=+- ...-+.+.. .+..+.|...+|+++|.-|++=..|
T Consensus 97 n~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSLG-~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~- 168 (194)
T PF13532_consen 97 NQCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSLG-SSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYDW- 168 (194)
T ss_dssp SEEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEEE-S-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHHE-
T ss_pred CEEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEEc-cCceEEEeeccCCCccEEEEcCCCCEEEeChHHhhhe-
Confidence 3567899986 34 89999997633 22221 112233333 3789999999999999988875444
Q ss_pred CCeecCcccccccCC---------CCCeEEEEe
Q 035820 295 NGKYMSCLHRAVVNR---------FTERRSLAF 318 (382)
Q Consensus 295 nG~~kS~~HRV~~~~---------~~~R~Si~~ 318 (382)
|.|.... ...|+||.|
T Consensus 169 --------H~I~~~~~~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 169 --------HGIPPVKKDTHPSHYVRGRRISLTF 193 (194)
T ss_dssp --------EEE-S-SCEEEESTEE-S-EEEEEE
T ss_pred --------eEcccccCCccccccCCCCEEEEEe
Confidence 4443222 237999976
No 38
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=59.89 E-value=5.6 Score=39.70 Aligned_cols=52 Identities=10% Similarity=0.166 Sum_probs=35.1
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhc
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFF 116 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF 116 (382)
.-||.||++++.++. +.++..+..++.|++.|.|+ ||.+......+..++|.
T Consensus 48 ~~IP~i~f~di~~~~------~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~ 99 (416)
T PF07350_consen 48 SIIPEIDFADIENGG------VSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYL 99 (416)
T ss_dssp -SS-EEEHHHHHCT---------HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHH
T ss_pred CCCceeeHHHHhCCC------CCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 359999999986542 23467788899999988876 88777666666665553
No 39
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=50.00 E-value=21 Score=31.36 Aligned_cols=37 Identities=19% Similarity=0.221 Sum_probs=28.7
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++++... ++ .++++++.+++++...+.|.|||+=
T Consensus 120 ~v~v~~~~~~--g~----~~la~~~~~~l~~~~~vll~nHGv~ 156 (184)
T PRK08333 120 KIPILPFRPA--GS----VELAEQVAEAMKEYDAVIMERHGIV 156 (184)
T ss_pred CEeeecCCCC--Cc----HHHHHHHHHHhccCCEEEEcCCCCE
Confidence 6899988753 33 3567788888888889999999964
No 40
>PRK08130 putative aldolase; Validated
Probab=48.10 E-value=24 Score=31.86 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=28.9
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++++... ++ .++++.+.+++.+...+.+.|||+=
T Consensus 127 ~i~v~~y~~~--g~----~~la~~~~~~l~~~~~vll~nHGvi 163 (213)
T PRK08130 127 HVPLIPYYRP--GD----PAIAEALAGLAARYRAVLLANHGPV 163 (213)
T ss_pred ccceECCCCC--Ch----HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 5899988653 22 3567788899999999999999954
No 41
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=45.02 E-value=1.2e+02 Score=27.00 Aligned_cols=21 Identities=24% Similarity=0.238 Sum_probs=14.3
Q ss_pred cccccccCCCCCeEEEEeeec
Q 035820 301 CLHRAVVNRFTERRSLAFFLC 321 (382)
Q Consensus 301 ~~HRV~~~~~~~R~Si~~F~~ 321 (382)
+.|+|..-....|+.+.|.+.
T Consensus 160 SlH~VtPVTRg~R~asffW~q 180 (229)
T COG3128 160 SLHEVTPVTRGERFASFFWIQ 180 (229)
T ss_pred cceeccccccCceEEEeeehH
Confidence 478886555667887766553
No 42
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=42.49 E-value=99 Score=29.81 Aligned_cols=87 Identities=23% Similarity=0.199 Sum_probs=50.6
Q ss_pred eeEEeccCCCCCCCCCccccCCCCCC------------ceeEEec--C-CCCceEEEeCCe-----------------EE
Q 035820 226 IMRCNNYPTCQASDLALGTGPHCDPT------------SLTILHQ--D-QVGGLEVFANNR-----------------WQ 273 (382)
Q Consensus 226 ~lr~~~Yp~~~~~~~~~g~~~HtD~~------------~lTlL~q--d-~~~GLqv~~~g~-----------------W~ 273 (382)
.|++.+|-+-.. ..+|.|+. +.|+|+. | ..||=-+....+ =+
T Consensus 133 ~lQVlrY~~Gq~------Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~FP~~~~~~~~~~~~~~s~c~~~gl 206 (310)
T PLN00052 133 NIQILRYEHGQK------YEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETVFPNAEGWENQPKDDTFSECAHKGL 206 (310)
T ss_pred ceEEEecCCCCC------CCCCCCccccccccccCCceeEEEEEEeccCCCCCceecCCcccccccccccchhhhhcCCe
Confidence 377778865332 45677742 6788875 2 234444433221 17
Q ss_pred EeccCCCceEEecccccccccCCe-ecCcccccccCCCCCeEEEEeeecC
Q 035820 274 SVRPRDDALVINIGDTFTALSNGK-YMSCLHRAVVNRFTERRSLAFFLCP 322 (382)
Q Consensus 274 ~V~p~pg~~vVnvGd~le~~SnG~-~kS~~HRV~~~~~~~R~Si~~F~~P 322 (382)
.|+|..|..|+.-= ...||. -..++|.+..--...++++...++-
T Consensus 207 ~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~ 252 (310)
T PLN00052 207 AVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHI 252 (310)
T ss_pred EeccCcceEEEEec----cCCCCCCCcccccCCCeeecCeEEEEEEeeec
Confidence 89999997766422 112332 2456888754445678888877764
No 43
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=39.53 E-value=54 Score=29.59 Aligned_cols=67 Identities=21% Similarity=0.141 Sum_probs=44.8
Q ss_pred CceeEEeccCCCCC-CCCCccccCCCCCCceeEEecCCCCceEEE--eCCeEEEeccCCCceEEecccccccccC
Q 035820 224 CSIMRCNNYPTCQA-SDLALGTGPHCDPTSLTILHQDQVGGLEVF--ANNRWQSVRPRDDALVINIGDTFTALSN 295 (382)
Q Consensus 224 ~~~lr~~~Yp~~~~-~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~--~~g~W~~V~p~pg~~vVnvGd~le~~Sn 295 (382)
...||..||.|... ++....+.-+ -.+++|+..+-..+. +.|.=+-|||-=|+.++|+||-==++.|
T Consensus 89 ~G~~~~~H~Hp~ade~E~y~vi~G~-----g~m~v~~~~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~pLvf~~ 158 (209)
T COG2140 89 PGAMRELHYHPNADEPEIYYVLKGE-----GRMLVQKPEGEARVIAVRAGDVIYVPPGYGHYTINTGDEPLVFLN 158 (209)
T ss_pred CCcccccccCCCCCcccEEEEEecc-----EEEEEEcCCCcEEEEEecCCcEEEeCCCcceEeecCCCCCEEEEE
Confidence 34588889976544 4444444433 345666655556654 4588899999999999999996555554
No 44
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=39.04 E-value=37 Score=33.38 Aligned_cols=52 Identities=13% Similarity=-0.001 Sum_probs=37.2
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcC
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFK 117 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~ 117 (382)
.++|.||++++.+++ ..+.++.+|+.++|+..|.+-.++.+. +.+.++.|-.
T Consensus 108 ~~~~~~d~~~~~~~~-----~~~~~~~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~G~ 159 (366)
T TIGR02409 108 LSLPKFDHEAVMKDD-----SVLLDWLSAVRDVGIAVLKGAPTKPGA---VEKLGKRIGF 159 (366)
T ss_pred ccCCceeHHHHhCCH-----HHHHHHHHHHHhccEEEEeCCCCCHHH---HHHHHHHhcc
Confidence 568999998876533 235578999999999999988876644 3444445533
No 45
>PRK06755 hypothetical protein; Validated
Probab=37.90 E-value=28 Score=31.54 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=27.3
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
..||+|+...- . .+++++.+.+++++...+.|.|||+=
T Consensus 135 ~~IPiv~~~~~----~--~~~la~~~~~~~~~~~avLl~~HGv~ 172 (209)
T PRK06755 135 MTIPIVEDEKK----F--ADLLENNVPNFIEGGGVVLVHNYGMI 172 (209)
T ss_pred eEEEEEeCCCc----h--hHHHHHHHHhhccCCCEEEEcCCCeE
Confidence 36999988642 1 14556667777778888999999965
No 46
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=37.28 E-value=43 Score=22.86 Aligned_cols=29 Identities=10% Similarity=0.110 Sum_probs=19.7
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~i~~~~grt~eqk~~l~~~i~~~l~~ 29 (58)
T cd00491 1 PFVQIYILEGRTDEQKRELIERVTEAVSE 29 (58)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 55665544444677888888888887755
No 47
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=37.18 E-value=42 Score=30.46 Aligned_cols=37 Identities=16% Similarity=0.127 Sum_probs=28.2
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.+|++++... ++ .++++.+.+++.+...+.|.|||+=
T Consensus 127 ~v~~~~y~~~--gs----~ela~~v~~~l~~~~~vlL~nHGv~ 163 (217)
T PRK05874 127 DVRCTEYAAS--GT----PEVGRNAVRALEGRAAALIANHGLV 163 (217)
T ss_pred ceeeecCCCC--Cc----HHHHHHHHHHhCcCCEEEEcCCCCe
Confidence 4778777642 33 3667788889999999999999964
No 48
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=36.83 E-value=1.1e+02 Score=26.67 Aligned_cols=57 Identities=16% Similarity=0.130 Sum_probs=35.9
Q ss_pred ceeEEeccCCCCCCCCCccccCCCCCCcee-------EEecCCCCc-eEEE---eCCeEEEeccCCCceEEecccc
Q 035820 225 SIMRCNNYPTCQASDLALGTGPHCDPTSLT-------ILHQDQVGG-LEVF---ANNRWQSVRPRDDALVINIGDT 289 (382)
Q Consensus 225 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lT-------lL~qd~~~G-Lqv~---~~g~W~~V~p~pg~~vVnvGd~ 289 (382)
...-+|+|++- -+++.|.|-.-+. |=+. ... +.+. +++....+.-.+|.++|.-|+.
T Consensus 95 n~~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSLG--~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 95 DACLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSLG--LPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred CEEEEEeecCC------CccccccccccccCCCCEEEEeCC--CCEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 34678999863 3799999943221 1111 111 2222 2456888999999999998873
No 49
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=36.79 E-value=1.1e+02 Score=28.63 Aligned_cols=97 Identities=14% Similarity=0.117 Sum_probs=54.5
Q ss_pred hhhccccccCcccchhhhhhcc-----CCCCCC-CccCCCCCCCCCCCCCCCc-eeeCCCCCCCCHHHHHHHHHHHHHHH
Q 035820 15 VELQGQRDHCGVSLVDSSLWQK-----QTNLPV-EFTWSKGDLVSSHGELMEP-VVDLEGFFRGDEVATQRAARIIKDAC 87 (382)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~-----~~~vP~-~~i~p~~~~~~~~~~~~IP-vIDls~l~~~d~~~r~~~~~~l~~A~ 87 (382)
..+-.|+.-+.+...++++-+. ..++++ .++.|+----........| +|.++ ++.-..+...+.+++
T Consensus 26 vGS~EQHGPhlPlgTD~~ia~~ia~~~~~~~~~~a~vlP~i~yG~s~eH~~fpGTitl~------~~t~~~~~~~~~~Sl 99 (250)
T COG1402 26 VGSTEQHGPHLPLGTDALIAEAIAEKVAERLGAEALVLPTIYYGVSLEHMGFPGTITLS------PETLIALLVELVESL 99 (250)
T ss_pred cccccccCCCCCcchhHHHHHHHHHHHHHHhCCCeEEeCccccccchhhcCCCceEEcc------HHHHHHHHHHHHHHH
Confidence 4555677777887777665442 233443 2222211100000111222 24443 245566777899999
Q ss_pred hhcCe--EEEEe-CCCCHHHHHHHHHHhhhhcC
Q 035820 88 MSHGF--FQVIN-HGIDASLISAAHDQIDNFFK 117 (382)
Q Consensus 88 ~~~GF--F~v~n-HGI~~~l~~~~~~~~~~FF~ 117 (382)
..+|| |+++| ||=....++.+.+..+..|.
T Consensus 100 ~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~~ 132 (250)
T COG1402 100 ARHGFRKFVIVNGHGGNSAALEIVARELRAELG 132 (250)
T ss_pred HhcCccEEEEEecCCCcHHHHHHHHHHHHHhcc
Confidence 99999 66665 88777777777766665554
No 50
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=36.34 E-value=48 Score=23.21 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=20.1
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.-+...++++++++++.|.+|+.+
T Consensus 2 P~i~i~~~~Grs~EqK~~L~~~it~a~~~ 30 (60)
T PRK02289 2 PFVRIDLFEGRSQEQKNALAREVTEVVSR 30 (60)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 66666554444777888888888887654
No 51
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=34.58 E-value=89 Score=26.28 Aligned_cols=39 Identities=8% Similarity=0.180 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhhcCeEEEEeC-CCCHHHHHHHHHHhhh
Q 035820 76 TQRAARIIKDACMSHGFFQVINH-GIDASLISAAHDQIDN 114 (382)
Q Consensus 76 r~~~~~~l~~A~~~~GFF~v~nH-GI~~~l~~~~~~~~~~ 114 (382)
+..+++++.+.++++.+++++++ |++...+.++....+.
T Consensus 3 K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 3 KEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred hHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 45678899999999998888875 8888777777766554
No 52
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=33.11 E-value=60 Score=28.41 Aligned_cols=36 Identities=28% Similarity=0.202 Sum_probs=26.3
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++ .... ++ .++++.+.+++.+.-.+.|.|||+=
T Consensus 115 ~ipv~-~~~~--~~----~~la~~v~~~l~~~~~vll~nHG~~ 150 (181)
T PRK08660 115 TIPVV-GGDI--GS----GELAENVARALSEHKGVVVRGHGTF 150 (181)
T ss_pred CEeEE-eCCC--CC----HHHHHHHHHHHhhCCEEEEcCCCce
Confidence 58888 3332 22 3567788888889899999999954
No 53
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=31.94 E-value=62 Score=29.27 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=27.3
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++.+... ++ .++++.+.+++.+...+.+.|||+=
T Consensus 122 ~v~~~~y~~~--gs----~~la~~~~~~l~~~~~vLl~nHGv~ 158 (215)
T PRK08087 122 SIPCAPYATF--GT----RELSEHVALALKNRKATLLQHHGLI 158 (215)
T ss_pred CceeecCCCC--CC----HHHHHHHHHHhCcCCEEEecCCCCE
Confidence 4888887653 23 2566778888888889999999964
No 54
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=30.41 E-value=68 Score=22.23 Aligned_cols=29 Identities=14% Similarity=0.093 Sum_probs=19.9
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.-+...+.++++++++.|.+++.+
T Consensus 2 P~i~i~~~~Grs~eqk~~l~~~it~~l~~ 30 (61)
T PRK02220 2 PYVHIKLIEGRTEEQLKALVKDVTAAVSK 30 (61)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 66666544444677888888888887654
No 55
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=29.57 E-value=1.7e+02 Score=24.86 Aligned_cols=40 Identities=8% Similarity=0.154 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHhhcCeEEEEeC-CCCHHHHHHHHHHhhh
Q 035820 75 ATQRAARIIKDACMSHGFFQVINH-GIDASLISAAHDQIDN 114 (382)
Q Consensus 75 ~r~~~~~~l~~A~~~~GFF~v~nH-GI~~~l~~~~~~~~~~ 114 (382)
....++++|.+.+++..+++++++ |++...+.++....+.
T Consensus 4 ~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 44 (157)
T cd05797 4 KKEEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELRE 44 (157)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 456778888888888888888765 8888777777766553
No 56
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=29.39 E-value=69 Score=22.31 Aligned_cols=29 Identities=10% Similarity=0.111 Sum_probs=18.2
Q ss_pred ceeeCCCC-CCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGF-FRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l-~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.-+ ...+.++++++++.|.+++.+
T Consensus 1 P~i~i~i~~~grt~eqK~~l~~~it~~l~~ 30 (63)
T TIGR00013 1 PFVNIYILKEGRTDEQKRQLIEGVTEAMAE 30 (63)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 56666555 234667777777777766654
No 57
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=29.27 E-value=60 Score=29.29 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=26.1
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++++... ++ .++++.+.+++.+...+.+.|||+=
T Consensus 124 ~i~~~~y~~~--gs----~~la~~v~~~l~~~~~vll~nHGv~ 160 (214)
T PRK06833 124 NVRCAEYATF--GT----KELAENAFEAMEDRRAVLLANHGLL 160 (214)
T ss_pred CeeeccCCCC--Ch----HHHHHHHHHHhCcCCEEEECCCCCE
Confidence 4666665422 22 3567778888888899999999954
No 58
>PF14178 YppF: YppF-like protein
Probab=28.74 E-value=1e+02 Score=21.98 Aligned_cols=35 Identities=17% Similarity=0.380 Sum_probs=31.7
Q ss_pred CCCCCCCHHHHHHHHHHhhhhhhhhHHHHHHhHhh
Q 035820 341 RIYPDFTWSDLLEFTQKHYRSDYATLENFTKWLLT 375 (382)
Q Consensus 341 ~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
..|.|-+..|.+.++.+.|..+.-+|..+|.-++.
T Consensus 14 k~y~p~~~NeLLDFar~~Yi~gei~i~eYR~lvre 48 (60)
T PF14178_consen 14 KKYEPEDMNELLDFARKLYIQGEISINEYRNLVRE 48 (60)
T ss_pred hccCcccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 46999999999999999999999999999988854
No 59
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=28.26 E-value=52 Score=22.80 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=18.2
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.-....+.+++++++++|.+++.+
T Consensus 1 P~I~i~~~~g~~~e~K~~l~~~it~~~~~ 29 (60)
T PF01361_consen 1 PFITIKIPEGRTAEQKRELAEAITDAVVE 29 (60)
T ss_dssp -EEEEEEESTS-HHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 56666544444667788888888877655
No 60
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=27.76 E-value=34 Score=29.82 Aligned_cols=38 Identities=29% Similarity=0.246 Sum_probs=27.7
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHh-hcCeEEEEeCCCC
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACM-SHGFFQVINHGID 101 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~-~~GFF~v~nHGI~ 101 (382)
..||+|+.... +++ ++++.|.+++. +...+.+.|||+=
T Consensus 122 ~~v~~~~~~~~--~~~----~l~~~i~~~l~~~~~~vll~nHG~~ 160 (184)
T PF00596_consen 122 GEVPVVPYAPP--GSE----ELAEAIAEALGEDRKAVLLRNHGVV 160 (184)
T ss_dssp SCEEEE-THST--TCH----HHHHHHHHHHTCTSSEEEETTTEEE
T ss_pred ccceeeccccc--cch----hhhhhhhhhhcCCceEEeecCCceE
Confidence 46999998763 333 34667888888 8899999999953
No 61
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=27.19 E-value=74 Score=30.04 Aligned_cols=37 Identities=14% Similarity=0.094 Sum_probs=27.3
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++.+... ++ .++++.+.+++.+...+.+.|||+=
T Consensus 179 ~i~vvpy~~p--gs----~eLa~~v~~~l~~~~avLL~nHGvv 215 (274)
T PRK03634 179 GVGIVPWMVP--GT----DEIGQATAEKMQKHDLVLWPKHGVF 215 (274)
T ss_pred ceeEecCCCC--CC----HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 4778777643 23 2566778888888899999999965
No 62
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=26.91 E-value=84 Score=21.81 Aligned_cols=29 Identities=14% Similarity=0.155 Sum_probs=19.6
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.-....+.++++++++.|.+++.+
T Consensus 2 P~i~I~~~~grs~eqk~~l~~~it~~l~~ 30 (62)
T PRK00745 2 PTFHIELFEGRTVEQKRKLVEEITRVTVE 30 (62)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 66666544444677888888888876544
No 63
>PRK00099 rplJ 50S ribosomal protein L10; Reviewed
Probab=26.09 E-value=2.1e+02 Score=24.77 Aligned_cols=40 Identities=5% Similarity=0.101 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhhcCeEEEEeC-CCCHHHHHHHHHHhhh
Q 035820 75 ATQRAARIIKDACMSHGFFQVINH-GIDASLISAAHDQIDN 114 (382)
Q Consensus 75 ~r~~~~~~l~~A~~~~GFF~v~nH-GI~~~l~~~~~~~~~~ 114 (382)
.+.+++++|.+.++++-+++++++ |++...+.++....+.
T Consensus 5 ~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 45 (172)
T PRK00099 5 EKKEIVAELAEKLKKAQSAVVADYRGLTVAQMTELRKKLRE 45 (172)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 456777788888888777777765 7777766666666554
No 64
>COG3384 Aromatic ring-opening dioxygenase, catalytic LigB subunit related enzyme [Amino acid transport and metabolism]
Probab=26.03 E-value=1.5e+02 Score=27.87 Aligned_cols=42 Identities=14% Similarity=0.140 Sum_probs=32.1
Q ss_pred CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCC
Q 035820 56 GELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHG 99 (382)
Q Consensus 56 ~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHG 99 (382)
+..+||||-+|-...-.++..-++.++|+++-++ | ..|+..|
T Consensus 129 PdadipVV~iSi~~~~~~~~h~~lG~al~~lree-~-vlilaSG 170 (268)
T COG3384 129 PDADIPVVQISIDCTLSPADHYELGRALRKLREE-G-VLILASG 170 (268)
T ss_pred CccCCcEEEEecCCCCCHHHHHHHHHHHHHHHhC-C-EEEEecC
Confidence 5678999999987655567778899999888888 6 5555555
No 65
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=25.24 E-value=61 Score=24.36 Aligned_cols=20 Identities=30% Similarity=0.491 Sum_probs=16.9
Q ss_pred HHHHHHhhcCeEEEEeCCCC
Q 035820 82 IIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 82 ~l~~A~~~~GFF~v~nHGI~ 101 (382)
.|..-|-+.||.||..|-+.
T Consensus 37 ~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 37 PIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred HHHHHHHhcceEEEEeeeec
Confidence 57888999999999877654
No 66
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=25.18 E-value=82 Score=29.71 Aligned_cols=37 Identities=14% Similarity=0.079 Sum_probs=28.2
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++.+... ++ .++++.+.+++++...+.+.|||+=
T Consensus 177 ~i~vvp~~~p--Gs----~eLA~~v~~~l~~~~avLL~nHGvv 213 (270)
T TIGR02624 177 GVGIIPWMVP--GT----NEIGEATAEKMKEHRLVLWPHHGIF 213 (270)
T ss_pred ccccccCcCC--CC----HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 4788877652 33 2677788899999999999999964
No 67
>PRK06357 hypothetical protein; Provisional
Probab=24.87 E-value=1e+02 Score=27.94 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=25.0
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhc------CeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSH------GFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~------GFF~v~nHGI~ 101 (382)
.||++.+... ++ .++++.+.+++++. ..+.+.|||+=
T Consensus 130 ~i~~~p~~~~--gs----~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv 172 (216)
T PRK06357 130 KIPTLPFAPA--TS----PELAEIVRKHLIELGDKAVPSAFLLNSHGIV 172 (216)
T ss_pred CcceecccCC--Cc----HHHHHHHHHHHhhcCcccCCCEEEECCCCCe
Confidence 4677766543 22 36677777777764 48889999954
No 68
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=24.07 E-value=86 Score=28.27 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=25.8
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++.+.... + .++++.+.+++.+...+.|.|||+=
T Consensus 121 ~i~~v~y~~~g--s----~~la~~v~~~~~~~~~vLL~nHG~~ 157 (214)
T TIGR01086 121 NIPCVPYATFG--S----TKLASEVVAGILKSKAILLLHHGLI 157 (214)
T ss_pred CccccCCCCCC--h----HHHHHHHHHHhhhCCEEehhcCCCE
Confidence 36777666432 2 2456677778888899999999954
No 69
>cd05796 Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic proteins with similarity to the 60S ribosomal protein P0, including the Saccharomyces cerevisiae protein called mRNA turnover protein 4 (MRT4). MRT4 may be involved in mRNA decay. P0 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. It occupies the L7/L12 stalk of the ribosome. The stalk is known to contain the binding site for elongation factors EF-G and EF-Tu; however, there is disagreement as to whether or not P0 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, P0 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WAS
Probab=23.28 E-value=1.7e+02 Score=25.11 Aligned_cols=39 Identities=10% Similarity=0.213 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhhcCeEEEEe-CCCCHHHHHHHHHHhhh
Q 035820 76 TQRAARIIKDACMSHGFFQVIN-HGIDASLISAAHDQIDN 114 (382)
Q Consensus 76 r~~~~~~l~~A~~~~GFF~v~n-HGI~~~l~~~~~~~~~~ 114 (382)
+.+.+++|.+.+.++-.++|++ +|++...++++.+..+.
T Consensus 3 K~~~v~~l~e~l~~y~~v~iv~~~gl~~~ql~~iR~~lr~ 42 (163)
T cd05796 3 KQKLVENIREAVDKYKYIYVFSVDNMRNNKLKDIRQEWKD 42 (163)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCCHHHHHHHHHHhcC
Confidence 5677889999999999887775 69999999998887664
No 70
>PF00466 Ribosomal_L10: Ribosomal protein L10; InterPro: IPR001790 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. On the basis of sequence similarities the following prokaryotic and eukaryotic ribosomal proteins can be grouped: Bacterial 50S ribosomal protein L10; Archaebacterial acidic ribosomal protein P0 homologue (L10E); Eukaryotic 60S ribosomal protein P0 (L10E). This entry represents the ribosomal protein L10P family, with includes the above mentioned ribosomal proteins.; GO: 0042254 ribosome biogenesis, 0005622 intracellular; PDB: 3A1Y_G 3D5D_J 3PYT_I 3PYV_I 3D5B_J 3PYO_I 3PYR_I 3MS1_I 3MRZ_I 1VQ9_G ....
Probab=23.03 E-value=3.4e+02 Score=20.80 Aligned_cols=42 Identities=10% Similarity=0.237 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhhcCeEEEEe-CCCCHHHHHHHHHHhhhh
Q 035820 74 VATQRAARIIKDACMSHGFFQVIN-HGIDASLISAAHDQIDNF 115 (382)
Q Consensus 74 ~~r~~~~~~l~~A~~~~GFF~v~n-HGI~~~l~~~~~~~~~~F 115 (382)
+....++++|.+.+.++=.++|.+ +|++...+.++....+..
T Consensus 4 ~~K~~~v~~~~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~~ 46 (100)
T PF00466_consen 4 EKKEEIVEELKELLKKSKYVIVVDYNGLSANQLQELRKELRKK 46 (100)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 456788899999999997766665 699998888888776654
No 71
>PRK06661 hypothetical protein; Provisional
Probab=22.72 E-value=92 Score=28.55 Aligned_cols=38 Identities=8% Similarity=0.056 Sum_probs=25.4
Q ss_pred CceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 60 EPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 60 IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
||..++......+ .+.++.+.+++.+...+.+.|||+=
T Consensus 124 i~~~~~~~~~~~~----~~~~~~~a~~l~~~~avll~nHG~v 161 (231)
T PRK06661 124 ISYHNYNSLALDA----DKQSSRLVNDLKQNYVMLLRNHGAI 161 (231)
T ss_pred ceecCCCccccCc----hhHHHHHHHHhCCCCEEEECCCCCe
Confidence 5555555432211 2445678888899999999999954
No 72
>COG2450 Uncharacterized conserved protein [Function unknown]
Probab=22.65 E-value=1.3e+02 Score=24.87 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=30.6
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEE
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQ 94 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~ 94 (382)
-+|=+.|++.+.. |+....+++++++.-.+++|-+.
T Consensus 64 GNIvIaDit~l~~-d~~~~~~V~e~lr~~a~~~ggdi 99 (124)
T COG2450 64 GNIVIADITPLER-DDDLFERVIEELRDTAEEVGGDI 99 (124)
T ss_pred CCEEEEEcCCccc-ChhHHHHHHHHHHHHHHHhCchh
Confidence 3789999999976 67788899999999999998664
No 73
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=22.25 E-value=1.1e+02 Score=30.03 Aligned_cols=51 Identities=12% Similarity=0.167 Sum_probs=36.0
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhc
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFF 116 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF 116 (382)
.+|.+|+.++...++ +...++.+++.++|+..|.|-.++.+.+. +.++.|.
T Consensus 100 ~~~~~~~~~~~~~~d----~~l~~~l~~l~~~G~v~~~g~~~~~~~~~---~~a~riG 150 (362)
T TIGR02410 100 KDPSVHFKTTYDHTD----STLKSFSKNIYKYGFTFVDNVPVTPEATE---KLCERIS 150 (362)
T ss_pred cCCceeHHHHhccCH----HHHHHHHHHHHhhCEEEEcCCCCCHHHHH---HHHHHhc
Confidence 468888887765322 33568899999999999999888765443 4444443
No 74
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=22.15 E-value=64 Score=28.89 Aligned_cols=40 Identities=13% Similarity=-0.044 Sum_probs=27.0
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
..||++++.....++ .++++.+.+++.+.-.+.+.|||+=
T Consensus 121 ~~ip~~~~~~~~~~~----~~la~~~~~~l~~~~~vll~nHG~~ 160 (209)
T cd00398 121 GDIPCTPYMTPETGE----DEIGTQRALGFPNSKAVLLRNHGLF 160 (209)
T ss_pred CCeeecCCcCCCccH----HHHHHHHhcCCCcCCEEEEcCCCCe
Confidence 368998887642122 2445566667778888999999954
No 75
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only]
Probab=22.11 E-value=1.9e+02 Score=22.87 Aligned_cols=45 Identities=20% Similarity=0.149 Sum_probs=33.0
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHH
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLI 105 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~ 105 (382)
.+=-||++.+..-|...-.- .-.+.+-|+..|. .|.-+|+|+.+.
T Consensus 40 ~~~~idLs~v~rvDSaglAL-L~~~~~~~k~~g~-~~~L~~~p~~L~ 84 (99)
T COG3113 40 DTVRIDLSGVSRVDSAGLAL-LLHLIRLAKKQGN-AVTLTGVPEQLR 84 (99)
T ss_pred CeEEEehhhcceechHHHHH-HHHHHHHHHHcCC-eeEEecCcHHHH
Confidence 46679999887656544444 4467788999998 788899997653
No 76
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=21.89 E-value=93 Score=28.15 Aligned_cols=37 Identities=22% Similarity=0.185 Sum_probs=25.4
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHH--hhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDAC--MSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~--~~~GFF~v~nHGI~ 101 (382)
.||++.+... ++ .++++.+.+++ .+...+.+.|||+=
T Consensus 130 ~ip~~~y~~~--g~----~ela~~i~~~l~~~~~~~vll~nHG~~ 168 (221)
T PRK06557 130 PIPVGPFALI--GD----EAIGKGIVETLKGGRSPAVLMQNHGVF 168 (221)
T ss_pred CeeccCCcCC--Cc----HHHHHHHHHHhCcCCCCEEEECCCCce
Confidence 5777766543 22 24556777777 67788899999965
No 77
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=21.88 E-value=1.1e+02 Score=21.45 Aligned_cols=29 Identities=17% Similarity=0.231 Sum_probs=19.3
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.-....+.++++++++.|.+++.+
T Consensus 2 P~v~i~l~~grt~eqk~~l~~~it~~l~~ 30 (64)
T PRK01964 2 PIVQIQLLEGRPEEKIKNLIREVTEAISA 30 (64)
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 56555543344677888888888887664
No 78
>cd05795 Ribosomal_P0_L10e Ribosomal protein L10 family, P0 and L10e subfamily; composed of eukaryotic 60S ribosomal protein P0 and the archaeal P0 homolog, L10e. P0 or L10e forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-interacting protein (WIP). These eukaryotic and archaeal P0 sequences have an additional C-terminal domain homologous with acidic proteins P1 and P2.
Probab=21.61 E-value=2e+02 Score=25.06 Aligned_cols=39 Identities=3% Similarity=0.092 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhhcCeEEEEe-CCCCHHHHHHHHHHhhh
Q 035820 76 TQRAARIIKDACMSHGFFQVIN-HGIDASLISAAHDQIDN 114 (382)
Q Consensus 76 r~~~~~~l~~A~~~~GFF~v~n-HGI~~~l~~~~~~~~~~ 114 (382)
+.+++++|.+.+.++..++|++ .|++...++++.+..++
T Consensus 3 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 42 (175)
T cd05795 3 KKEYVEKLTELLKSYPKVLIVDADNVGSKQLQKIRRSLRG 42 (175)
T ss_pred HHHHHHHHHHHHHhCCEEEEEEecCCChHHHHHHHHHhhC
Confidence 5677889999999999888886 69999988888887664
No 79
>PLN02433 uroporphyrinogen decarboxylase
Probab=21.31 E-value=1.9e+02 Score=28.16 Aligned_cols=47 Identities=15% Similarity=0.208 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC----HHHHHHHHHHhhhhc
Q 035820 70 RGDEVATQRAARIIKDACMSHGFFQVINHGID----ASLISAAHDQIDNFF 116 (382)
Q Consensus 70 ~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~----~~l~~~~~~~~~~FF 116 (382)
.+++++-.+.++++.+++..-||+.=.+|||+ .+-++.+.++++++-
T Consensus 288 ~gt~e~i~~~v~~~i~~~~~~g~Il~~Gc~i~~~tp~eNi~a~v~av~~~~ 338 (345)
T PLN02433 288 FGSKEAIEKEVRDVVKKAGPQGHILNLGHGVLVGTPEENVAHFFDVARELR 338 (345)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCCHHHHHHHHHHHHHhC
Confidence 46776666666677777767787666788877 578888888888753
No 80
>PF14401 RLAN: RimK-like ATPgrasp N-terminal domain
Probab=21.19 E-value=54 Score=28.12 Aligned_cols=27 Identities=41% Similarity=0.631 Sum_probs=24.5
Q ss_pred CceEEecccccccccCCeecCcc-----cccc
Q 035820 280 DALVINIGDTFTALSNGKYMSCL-----HRAV 306 (382)
Q Consensus 280 g~~vVnvGd~le~~SnG~~kS~~-----HRV~ 306 (382)
..-|||+-+....+|.|+|.|-+ |||+
T Consensus 16 ~~rViNLcrsy~Yls~GYY~SLLAEARgh~vi 47 (153)
T PF14401_consen 16 RTRVINLCRSYRYLSEGYYCSLLAEARGHRVI 47 (153)
T ss_pred CceEEEecCCccccCcceeeeHHHHHcCCCCC
Confidence 46799999999999999999976 9997
No 81
>PF08140 Cuticle_1: Crustacean cuticle protein repeat; InterPro: IPR012539 This family consists of the cuticle proteins from the Cancer pagurus (Rock crab) and the Homarus americanus (American lobster). These proteins are isolated from the calcified regions of the crustacean and they contain two copies of an 18 residue sequence motif, which thus far has been found only in crustacean calcified exoskeletons [].; GO: 0042302 structural constituent of cuticle
Probab=21.14 E-value=1.1e+02 Score=20.02 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=24.1
Q ss_pred EEeCCeEEEeccCCCceEEecccccccccCCee
Q 035820 266 VFANNRWQSVRPRDDALVINIGDTFTALSNGKY 298 (382)
Q Consensus 266 v~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~ 298 (382)
|..||.++..++.-- -||.+|..=-++|||..
T Consensus 6 i~~dG~~~q~~~~~a-~ivl~GpSG~v~sdG~n 37 (40)
T PF08140_consen 6 ITPDGTNVQFPHGVA-NIVLIGPSGAVLSDGKN 37 (40)
T ss_pred ECCCCCEEECCcccc-eEEEECCceEEeeCCcE
Confidence 346777877776554 78889998888898864
No 82
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=21.13 E-value=2.1e+02 Score=28.80 Aligned_cols=55 Identities=20% Similarity=0.312 Sum_probs=41.7
Q ss_pred eeCCCCC-CCCHHHHHHHHHHHHHH------------HhhcCeEEEEeCCCCHHHHHHHHHHhhhhcC
Q 035820 63 VDLEGFF-RGDEVATQRAARIIKDA------------CMSHGFFQVINHGIDASLISAAHDQIDNFFK 117 (382)
Q Consensus 63 IDls~l~-~~d~~~r~~~~~~l~~A------------~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~ 117 (382)
+||+.++ +.+-++-.++-++|.++ |.+-|.|.|+--...+++++-+++..+.|-.
T Consensus 393 vDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 393 VDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred EEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 7998875 44444444556677777 9999999999999999988877777777654
No 83
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=20.78 E-value=1.6e+02 Score=21.03 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=28.9
Q ss_pred eEEEeCCeEEEeccCCCceEEecccccccccCCee
Q 035820 264 LEVFANNRWQSVRPRDDALVINIGDTFTALSNGKY 298 (382)
Q Consensus 264 Lqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~ 298 (382)
|++...--|+.+.-.++-.++..||.|.+-.++++
T Consensus 20 l~v~~G~vWlT~~g~~~D~~L~~G~~l~l~~g~~v 54 (63)
T PF11142_consen 20 LRVESGRVWLTREGDPDDYWLQAGDSLRLRRGGRV 54 (63)
T ss_pred EEEccccEEEECCCCCCCEEECCCCEEEeCCCCEE
Confidence 55556667999999999999999999988777654
No 84
>PRK05834 hypothetical protein; Provisional
Probab=20.38 E-value=1.2e+02 Score=26.90 Aligned_cols=39 Identities=21% Similarity=0.160 Sum_probs=24.5
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcC--eEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHG--FFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~G--FF~v~nHGI~ 101 (382)
.||+++..... + ..+.+++.+.+++.+.. .+.|.|||+=
T Consensus 121 ~ipv~~~~~~~--~--~~~~la~~v~~~l~~~~~~avLL~nHGvv 161 (194)
T PRK05834 121 EISIYDPKDFD--D--WYERADTEILRYLQEKNKNFVVIKGYGVY 161 (194)
T ss_pred eeeecCccccc--h--HHHhHHHHHHHHHhhcCCCEEEEcCCcce
Confidence 47777654331 1 12234566778887755 8999999954
No 85
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=20.33 E-value=1.7e+02 Score=25.07 Aligned_cols=58 Identities=26% Similarity=0.239 Sum_probs=30.5
Q ss_pred cccCCCCCCc--eeEEec-CC-CCceEEEeCCeEEEeccCCCceEEecccccccccCCee----cCcccccccCCCCCeE
Q 035820 243 GTGPHCDPTS--LTILHQ-DQ-VGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKY----MSCLHRAVVNRFTERR 314 (382)
Q Consensus 243 g~~~HtD~~~--lTlL~q-d~-~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~----kS~~HRV~~~~~~~R~ 314 (382)
.+.+|+|.+- +++.+. .. .+|-. +.+|+.--.|..|.. -|-.|.|...++.+|+
T Consensus 92 ~I~pH~d~~~~~lR~Hl~L~~p~~~~~------------------~~v~~~~~~w~~G~~~~fD~s~~H~~~N~~~~~Rv 153 (163)
T PF05118_consen 92 HIKPHRDPTNLRLRLHLPLIVPNPGCY------------------IRVGGETRHWREGECWVFDDSFEHEVWNNGDEDRV 153 (163)
T ss_dssp EEEEE-SS-TTEEEEEEEEC--STTEE------------------EEETTEEEB--CTEEEEE-TTS-EEEEESSSS-EE
T ss_pred EECCeeCCCCcceEEEEEEEcCCCCeE------------------EEECCeEEEeccCcEEEEeCCEEEEEEeCCCCCEE
Confidence 4788999873 555543 11 13333 344444444444433 2568999888888998
Q ss_pred EEEe
Q 035820 315 SLAF 318 (382)
Q Consensus 315 Si~~ 318 (382)
-+.+
T Consensus 154 ~L~v 157 (163)
T PF05118_consen 154 VLIV 157 (163)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 86
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=20.15 E-value=1.4e+02 Score=24.91 Aligned_cols=31 Identities=29% Similarity=0.368 Sum_probs=22.3
Q ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEe
Q 035820 63 VDLEGFFRGDEVATQRAARIIKDACMSHGFFQVIN 97 (382)
Q Consensus 63 IDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~n 97 (382)
.|...+ +.+.|+...++|...|++.|| .|.+
T Consensus 64 ydytG~---~~~~r~~~y~kI~~~~~~~gf-~v~D 94 (130)
T PF04914_consen 64 YDYTGL---SKEMRQEYYKKIKYQLKSQGF-NVAD 94 (130)
T ss_dssp HHHTT-----HHHHHHHHHHHHHHHHTTT---EEE
T ss_pred HHHhCC---CHHHHHHHHHHHHHHHHHCCC-EEEe
Confidence 445544 557899999999999999999 7765
Done!