Query 035820
Match_columns 382
No_of_seqs 256 out of 1630
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 11:03:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035820.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035820hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 7.4E-84 2.5E-88 628.9 30.7 330 28-364 6-350 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 1.3E-77 4.3E-82 576.5 21.9 296 59-371 3-306 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.3E-76 4.4E-81 568.8 25.3 294 58-357 5-307 (312)
4 1odm_A Isopenicillin N synthas 100.0 3.8E-73 1.3E-77 548.7 25.2 287 58-359 7-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 4.6E-72 1.6E-76 536.5 18.5 271 58-354 3-300 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 6.4E-67 2.2E-71 493.6 23.5 256 58-355 2-273 (280)
7 3dkq_A PKHD-type hydroxylase S 95.4 0.042 1.4E-06 49.7 8.1 104 199-321 74-194 (243)
8 2rg4_A Uncharacterized protein 92.1 2.6 8.7E-05 37.1 12.9 43 270-324 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 88.8 0.88 3E-05 41.0 7.0 79 227-321 119-212 (247)
10 2jig_A Prolyl-4 hydroxylase; h 85.3 1.5 5.1E-05 38.6 6.4 104 200-322 82-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 84.2 1.9 6.5E-05 38.0 6.4 103 199-321 94-211 (216)
12 2iuw_A Alkylated repair protei 80.1 5.7 0.00019 35.4 8.1 84 226-321 127-229 (238)
13 3s57_A Alpha-ketoglutarate-dep 78.0 5.1 0.00018 34.8 6.9 80 226-319 101-200 (204)
14 3i3q_A Alpha-ketoglutarate-dep 64.7 17 0.0006 31.6 7.2 79 226-320 106-201 (211)
15 3tht_A Alkylated DNA repair pr 64.0 8.1 0.00028 36.5 5.2 93 225-324 198-315 (345)
16 2dbn_A Hypothetical protein YB 44.4 9.6 0.00033 37.2 2.2 52 58-116 99-150 (461)
17 4ay7_A Methylcobalamin\: coenz 43.5 51 0.0017 30.6 7.1 47 68-117 298-348 (348)
18 1e5r_A Proline oxidase; oxidor 40.3 26 0.00089 32.1 4.3 63 243-320 103-175 (290)
19 3o2g_A Gamma-butyrobetaine dio 37.5 12 0.0004 35.8 1.6 52 59-118 122-173 (388)
20 1m5a_B Insulin B chain; alpha 36.2 37 0.0013 19.8 2.9 17 78-94 10-26 (30)
21 3pnt_A NAD+-glycohydrolase; gl 35.5 40 0.0014 29.0 4.4 53 37-99 188-240 (268)
22 2da7_A Zinc finger homeobox pr 34.1 23 0.00078 25.2 2.2 41 180-221 14-54 (71)
23 2j01_J 50S ribosomal protein L 31.0 96 0.0033 25.7 6.2 41 74-114 4-46 (173)
24 2opi_A L-fuculose-1-phosphate 30.9 23 0.00079 30.6 2.3 37 59-101 125-161 (212)
25 3rcq_A Aspartyl/asparaginyl be 30.9 93 0.0032 26.6 6.1 43 282-324 139-186 (197)
26 1zav_A 50S ribosomal protein L 30.2 97 0.0033 25.9 6.1 41 74-114 6-47 (180)
27 1otf_A 4-oxalocrotonate tautom 29.0 36 0.0012 22.4 2.6 29 61-89 1-29 (62)
28 2opa_A Probable tautomerase YW 27.7 40 0.0014 22.1 2.6 29 61-89 1-29 (61)
29 3kt7_A PKHD-type hydroxylase T 26.8 88 0.003 31.7 5.9 83 227-324 126-231 (633)
30 3jsy_A Acidic ribosomal protei 26.5 1.2E+02 0.004 26.3 6.0 41 74-114 3-44 (213)
31 3m20_A 4-oxalocrotonate tautom 26.1 65 0.0022 21.5 3.5 28 61-89 1-28 (62)
32 1e4c_P L-fuculose 1-phosphate 25.9 31 0.0011 29.8 2.2 37 59-101 122-158 (215)
33 2ww6_A Fibritin, T4 fibritin; 23.5 65 0.0022 18.1 2.4 14 263-276 11-24 (27)
34 2fk5_A Fuculose-1-phosphate al 23.3 40 0.0014 28.8 2.4 36 59-100 117-153 (200)
35 1otj_A Alpha-ketoglutarate-dep 22.9 76 0.0026 28.3 4.3 50 58-116 16-65 (283)
36 3ry0_A Putative tautomerase; o 22.4 57 0.0019 21.9 2.6 29 61-89 1-29 (65)
37 2x4k_A 4-oxalocrotonate tautom 22.0 59 0.002 21.2 2.6 31 60-90 3-33 (63)
38 1pvt_A Sugar-phosphate aldolas 21.9 46 0.0016 29.2 2.6 37 59-101 161-197 (238)
39 1gyx_A YDCE, B1461, hypothetic 20.5 78 0.0027 22.1 3.1 43 61-103 1-49 (76)
40 3m21_A Probable tautomerase HP 20.4 73 0.0025 21.5 2.9 29 61-89 1-32 (67)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=7.4e-84 Score=628.93 Aligned_cols=330 Identities=26% Similarity=0.408 Sum_probs=298.6
Q ss_pred chhhhhhccCCCCCCCccCCCCCCCCCCC---------CCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeC
Q 035820 28 LVDSSLWQKQTNLPVEFTWSKGDLVSSHG---------ELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINH 98 (382)
Q Consensus 28 ~~~~~~~~~~~~vP~~~i~p~~~~~~~~~---------~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nH 98 (382)
.||+|+++++.+||++||+|.++++.... ..+||||||+.|.++++++|.+++++|.+||++||||||+||
T Consensus 6 ~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nH 85 (356)
T 1gp6_A 6 RVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINH 85 (356)
T ss_dssp CHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESC
T ss_pred cHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCC
Confidence 48999999999999999999988876311 236999999999877888889999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhhhcCCCHHHHhhccCCC--CCCccccCCCCCccCCCCCceeceeccccCCCCCccccccccCCCC
Q 035820 99 GIDASLISAAHDQIDNFFKLPTSRKLKAQRMP--GNMWGYSGAHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIG 176 (382)
Q Consensus 99 GI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~--~~~~GY~~~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~ 176 (382)
||+.++++++++.+++||+||.|+|+++.+.. ...+||+........+..||+|.|+++..|.. ....+.||..+
T Consensus 86 Gi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~-~~~~~~wP~~~-- 162 (356)
T 1gp6_A 86 GIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEE-KRDLSIWPKTP-- 162 (356)
T ss_dssp SCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGG-GCCGGGSCCSS--
T ss_pred CCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCcc-ccccccCCCcc--
Confidence 99999999999999999999999999998754 35789987765555678899999999876543 23457788643
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhh---ccCceeEEeccCCCCCCCCCccccCCCCCCce
Q 035820 177 KDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFE---EGCSIMRCNNYPTCQASDLALGTGPHCDPTSL 253 (382)
Q Consensus 177 ~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~l 253 (382)
+.||+++++|+++|.+|+.+||++|+++|| |++++|.+.+. ...+.||++|||||++++..+|+++|||+|+|
T Consensus 163 ---~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~l 238 (356)
T 1gp6_A 163 ---SDYIEATSEYAKCLRLLATKVFKALSVGLG-LEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSAL 238 (356)
T ss_dssp ---TTHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSE
T ss_pred ---hhhhHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeE
Confidence 789999999999999999999999999999 99999999987 57789999999999999889999999999999
Q ss_pred eEEecCCCCceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCc-eeeCCC
Q 035820 254 TILHQDQVGGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDK-VVRPPQ 332 (382)
Q Consensus 254 TlL~qd~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~p~~ 332 (382)
|||+||+++||||+++|+|++|+|+||++|||+||+||+||||+|||++|||++++..+|+|++||++|+.|+ +|.|++
T Consensus 239 TlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~ 318 (356)
T 1gp6_A 239 TFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLP 318 (356)
T ss_dssp EEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCG
T ss_pred EEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCCh
Confidence 9999999999999999999999999999999999999999999999999999999889999999999999999 999999
Q ss_pred CccCCCCCCCCCCCCHHHHHHHHHHhhhhhhh
Q 035820 333 DLICRQGTRIYPDFTWSDLLEFTQKHYRSDYA 364 (382)
Q Consensus 333 ~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~ 364 (382)
+++++++|++|+++||+||++........++.
T Consensus 319 ~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~ 350 (356)
T 1gp6_A 319 EMVSVESPAKFPPRTFAQHIEHKLFGKEQEEL 350 (356)
T ss_dssp GGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred hhcCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence 99999999999999999999876665555544
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.3e-77 Score=576.47 Aligned_cols=296 Identities=25% Similarity=0.475 Sum_probs=260.7
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCccccC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYSG 138 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~ 138 (382)
+||||||+.+.. .+|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..||.+
T Consensus 3 ~iPvIDls~l~~---~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~ 76 (319)
T 1w9y_A 3 NFPIISLDKVNG---VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEG 76 (319)
T ss_dssp CCCEEEGGGGGS---TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTT
T ss_pred CCCEEECcccCc---ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCc
Confidence 699999998852 34678899999999999999999999999999999999999999999999998643 348876
Q ss_pred CCCCccCCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHH
Q 035820 139 AHADRFCSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYRE 218 (382)
Q Consensus 139 ~~~~~~~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~ 218 (382)
...+ .+..||+|.|.++..|.. ..+.||..+ +.||+++++|+++|.+|+.+||++|+++|| |++++|.+
T Consensus 77 ~~~e--~~~~d~ke~~~~~~~p~~---~~~~wP~~~-----~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~~f~~ 145 (319)
T 1w9y_A 77 VQAE--VTDMDWESTFFLKHLPIS---NISEVPDLD-----EEYREVMRDFAKRLEKLAEELLDLLCENLG-LEKGYLKN 145 (319)
T ss_dssp CCCC--GGGCCCCEEEEEEEESCC---GGGGCTTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCTTHHHH
T ss_pred cccc--CCCCChhhheeeecCCcc---cccccccch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHH
Confidence 5332 467899999998876643 356788643 899999999999999999999999999999 99999999
Q ss_pred Hhhc---cCceeEEeccCCCCCCCCCccccCCCCCCceeEEecC-CCCceEEEeCCeEEEeccCCCceEEeccccccccc
Q 035820 219 FFEE---GCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQD-QVGGLEVFANNRWQSVRPRDDALVINIGDTFTALS 294 (382)
Q Consensus 219 ~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~S 294 (382)
.+.. ..+.||+||||||++++..+|+++|||+|+||||+|| +++||||+++|+|++|+|+||++|||+||+||+||
T Consensus 146 ~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~S 225 (319)
T 1w9y_A 146 AFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVIT 225 (319)
T ss_dssp HHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHT
T ss_pred HhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHh
Confidence 8873 5578999999999999989999999999999999995 79999999999999999999999999999999999
Q ss_pred CCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCC---CCCCCCCCCHHHHHHHHHHhhhhhhhh-HHHHH
Q 035820 295 NGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQ---GTRIYPDFTWSDLLEFTQKHYRSDYAT-LENFT 370 (382)
Q Consensus 295 nG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~---~p~~y~~~~~~e~~~~~~~~~~~~~~~-~~~~~ 370 (382)
||+|||++|||+++++++|+|++||++|+.|++|.|++++++++ +|++|+++||+||++.....+..++.. ++.+|
T Consensus 226 nG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 305 (319)
T 1w9y_A 226 NGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMK 305 (319)
T ss_dssp TTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHH
T ss_pred CCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHH
Confidence 99999999999999889999999999999999999999999988 699999999999999877666666654 56665
Q ss_pred H
Q 035820 371 K 371 (382)
Q Consensus 371 ~ 371 (382)
.
T Consensus 306 ~ 306 (319)
T 1w9y_A 306 A 306 (319)
T ss_dssp H
T ss_pred H
Confidence 4
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.3e-76 Score=568.83 Aligned_cols=294 Identities=23% Similarity=0.320 Sum_probs=255.3
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCcccc
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYS 137 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~ 137 (382)
.+||||||+.+.+ .+.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.......+||.
T Consensus 5 ~~iPvIDls~~~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~ 80 (312)
T 3oox_A 5 SAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYI 80 (312)
T ss_dssp CSSCCEETHHHHH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEE
T ss_pred CCCCeEEChHhcc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccc
Confidence 4799999998743 467789999999999999999999999999999999999999999999999987544578997
Q ss_pred CCCCCcc--CCCCCceeceecccc-CCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChh
Q 035820 138 GAHADRF--CSKLPWKETLSFGFD-DCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDRL 214 (382)
Q Consensus 138 ~~~~~~~--~~~~d~kE~f~~~~~-p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~ 214 (382)
+.+.+.. ....||+|.|.++.. +.. .......+.+.||+.++.||+++++|+++|.+|+.+||++|+++|| |+++
T Consensus 81 ~~g~e~~~~~~~~D~kE~~~~~~~~~~~-~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~ 158 (312)
T 3oox_A 81 PFGVETAKGADHYDLKEFWHMGRDLPPG-HRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLK-LERD 158 (312)
T ss_dssp CCCCCCSTTSCSCCCCEEEEECCCCCTT-CGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SCTT
T ss_pred cccceecCCCCCCCceeeeEeecCCCcC-CcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cCHH
Confidence 6655432 356899999988653 222 1111222333444445889999999999999999999999999999 9999
Q ss_pred hHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCCceeEEecCCCCceEEE-eCCeEEEeccCCCceEEecccccccc
Q 035820 215 HYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPTSLTILHQDQVGGLEVF-ANNRWQSVRPRDDALVINIGDTFTAL 293 (382)
Q Consensus 215 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~-~~g~W~~V~p~pg~~vVnvGd~le~~ 293 (382)
+|.+.+..+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+|
T Consensus 159 ~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 238 (312)
T 3oox_A 159 FFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERL 238 (312)
T ss_dssp TTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred HHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence 99999998889999999999998655699999999999999999999999996 78999999999999999999999999
Q ss_pred cCCeecCcccccccCC----CCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCC-CCCHHHHHHHHHH
Q 035820 294 SNGKYMSCLHRAVVNR----FTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYP-DFTWSDLLEFTQK 357 (382)
Q Consensus 294 SnG~~kS~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~-~~~~~e~~~~~~~ 357 (382)
|||+|||++|||+.++ ..+|||++||++|+.|++|.|+++|+++++|++|+ ++||+||++...+
T Consensus 239 TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~ 307 (312)
T 3oox_A 239 TNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLR 307 (312)
T ss_dssp TTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHH
T ss_pred hCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHH
Confidence 9999999999998653 46799999999999999999999999999999999 9999999985443
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.8e-73 Score=548.74 Aligned_cols=287 Identities=23% Similarity=0.281 Sum_probs=254.5
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhh-cCCCHHHHhhccCCCCCCccc
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNF-FKLPTSRKLKAQRMPGNMWGY 136 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~F-F~lP~eeK~~~~~~~~~~~GY 136 (382)
.+||||||+.|.++++++|.+++++|++||++||||||+|||| +++++++.+++| |+||.|+|+++.+ +||
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy 78 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAY 78 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCC
Confidence 4699999999988888889999999999999999999999999 999999999999 9999999999976 678
Q ss_pred cCCCCCcc--------CCCCCceeceeccccCC-CCC--------ccccccccCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 035820 137 SGAHADRF--------CSKLPWKETLSFGFDDC-SLN--------PMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLG 199 (382)
Q Consensus 137 ~~~~~~~~--------~~~~d~kE~f~~~~~p~-~~~--------~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ 199 (382)
.+.+.+.. .+..||+|.|+++.... +.+ ...+.||... .+++||+++++|+++|.+|+.+
T Consensus 79 ~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~---~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 79 NKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDET---KHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp CTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTT---TSTTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCC---CChHHHHHHHHHHHHHHHHHHH
Confidence 76544321 14679999999986421 101 1245676541 1488999999999999999999
Q ss_pred HHHHHHHHcCCCChhhHHHHhhccCceeE--EeccC------C---CCCCCC-CccccCCCCCCceeEEecCCCCceEEE
Q 035820 200 ITELLAISLGINDRLHYREFFEEGCSIMR--CNNYP------T---CQASDL-ALGTGPHCDPTSLTILHQDQVGGLEVF 267 (382)
Q Consensus 200 ll~~la~~Lg~l~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~g~~~HtD~~~lTlL~qd~~~GLqv~ 267 (382)
||++|+++|| |++++|.+.++.+.+.|| ++||| | |++++. .+|+++|||+|+||||+||+++||||+
T Consensus 156 ll~~la~~Lg-l~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~ 234 (331)
T 1odm_A 156 LLKGYALALG-KEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVE 234 (331)
T ss_dssp HHHHHHHHTT-SCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEE
T ss_pred HHHHHHHHhC-CCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEE
Confidence 9999999999 999999999988889999 99999 8 888876 899999999999999999999999998
Q ss_pred -eCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCC
Q 035820 268 -ANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDF 346 (382)
Q Consensus 268 -~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~ 346 (382)
++| |++|+|+||++|||+||+||+||||+|||++|||+. +..+|+|++||++|+.|++|.|+++++++++ ++|+++
T Consensus 235 ~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~ 311 (331)
T 1odm_A 235 TAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPL 311 (331)
T ss_dssp ETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCC
T ss_pred cCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCc
Confidence 678 999999999999999999999999999999999985 5789999999999999999999999999888 899999
Q ss_pred CHHHHHHHHHHhh
Q 035820 347 TWSDLLEFTQKHY 359 (382)
Q Consensus 347 ~~~e~~~~~~~~~ 359 (382)
||+||++...+.+
T Consensus 312 t~~e~l~~~~~~~ 324 (331)
T 1odm_A 312 SYGDYLQNGLVSL 324 (331)
T ss_dssp BHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999998765544
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=4.6e-72 Score=536.52 Aligned_cols=271 Identities=18% Similarity=0.218 Sum_probs=231.9
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCC-HHHHhhccCCC-CCCcc
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLP-TSRKLKAQRMP-GNMWG 135 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP-~eeK~~~~~~~-~~~~G 135 (382)
.+||||||+.+.+++.. ++|++||++||||||+||||+.++++++++++++||+|| .|+|+++.... ...+|
T Consensus 3 ~~iPvIDls~l~~~~~~------~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~G 76 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ------DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRG 76 (311)
T ss_dssp CCCCEEEHHHHHTTCSH------HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSE
T ss_pred CCCcEEEchhhcCCCHH------HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCc
Confidence 47999999988655432 289999999999999999999999999999999999999 99999998753 45799
Q ss_pred ccCCCCCcc------CCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 035820 136 YSGAHADRF------CSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLG 209 (382)
Q Consensus 136 Y~~~~~~~~------~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 209 (382)
|.+.+.+.. .+..||+|+|.++.. .+.|| ++.||+.+++|+++|.+|+.+||++|+++||
T Consensus 77 y~~~~~e~~~~~~~~~~~~d~~E~~~~~~~-------~n~wP-------~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 142 (311)
T 1dcs_A 77 FTGLESESTAQITNTGSYSDYSMCYSMGTA-------DNLFP-------SGDFERIWTQYFDRQYTASRAVAREVLRATG 142 (311)
T ss_dssp EEEC-----------------CEEEEECSS-------SCCCS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeeccccccccccCCCCCCCcceeeeccCC-------CCCCC-------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 987665432 467899999998643 35687 2889999999999999999999999999999
Q ss_pred CC----ChhhHHHHhhccCceeEEeccCCCCCCC--C--CccccCCCCCCceeEEecC-CCCc---eEEEeCCeEEEecc
Q 035820 210 IN----DRLHYREFFEEGCSIMRCNNYPTCQASD--L--ALGTGPHCDPTSLTILHQD-QVGG---LEVFANNRWQSVRP 277 (382)
Q Consensus 210 ~l----~~~~~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~g~~~HtD~~~lTlL~qd-~~~G---Lqv~~~g~W~~V~p 277 (382)
| ++++|.+. .+.||++|||||++++ . .+|+++|||+|+||||+|| +++| |||+.+|+|++|+|
T Consensus 143 -l~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p 217 (311)
T 1dcs_A 143 -TEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPY 217 (311)
T ss_dssp -CCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCC
T ss_pred -CCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcC
Confidence 9 88888765 7889999999999864 3 6889999999999999998 8999 99999999999999
Q ss_pred CCCceEEecccccccccCCeecCcccccccCC-----CCCeEEEEeeecCCCCceeeCCCCccCCCCCCCC--CCCCHHH
Q 035820 278 RDDALVINIGDTFTALSNGKYMSCLHRAVVNR-----FTERRSLAFFLCPREDKVVRPPQDLICRQGTRIY--PDFTWSD 350 (382)
Q Consensus 278 ~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~-----~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y--~~~~~~e 350 (382)
+||++||||||+||+||||+|||++|||++++ .++|+|++||++|+.|++|. +++++++++|++| +++||+|
T Consensus 218 ~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~e 296 (311)
T 1dcs_A 218 RPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQD 296 (311)
T ss_dssp CTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHH
T ss_pred CCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHH
Confidence 99999999999999999999999999999987 77999999999999999999 9999999999999 9999999
Q ss_pred HHHH
Q 035820 351 LLEF 354 (382)
Q Consensus 351 ~~~~ 354 (382)
|++.
T Consensus 297 y~~~ 300 (311)
T 1dcs_A 297 WIGG 300 (311)
T ss_dssp HHCS
T ss_pred HHHH
Confidence 9874
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=6.4e-67 Score=493.62 Aligned_cols=256 Identities=21% Similarity=0.253 Sum_probs=218.8
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCCCHHHHhhccCCCCCCcccc
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKLPTSRKLKAQRMPGNMWGYS 137 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~ 137 (382)
++||||||+.. +.+++|.+||++||||||+||||+.++++++++++++||+| |+|+++.+.++..+||.
T Consensus 2 ~~IPvIDls~~---------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~ 70 (280)
T 3on7_A 2 MKLETIDYRAA---------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFF 70 (280)
T ss_dssp --CCEEETTST---------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEE
T ss_pred CCCCEEECCCh---------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccc
Confidence 46999999963 13578999999999999999999999999999999999997 89999987666689998
Q ss_pred CCC-CCcc--CCCCCceeceeccccCCCCCccccccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCh-
Q 035820 138 GAH-ADRF--CSKLPWKETLSFGFDDCSLNPMVVNFFNSNIGKDFEQTGIIYQKYCEAMKCLSLGITELLAISLGINDR- 213 (382)
Q Consensus 138 ~~~-~~~~--~~~~d~kE~f~~~~~p~~~~~~~~~wP~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~- 213 (382)
+.. .+.. ....||+|+|.+. | ||.. ++.||+++++|+++|.+|+.+||++|+++|| ++.
T Consensus 71 ~~~~~e~~~~~~~~D~kE~~~~~--p---------~~~~-----p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg-l~~~ 133 (280)
T 3on7_A 71 PASISETAKGHTVKDIKEYYHVY--P---------WGRI-----PDSLRANILAYYEKANTLASELLEWIETYSP-DEIK 133 (280)
T ss_dssp CCC--------CCCCSCEEEEEC--T---------TSCC-----CGGGHHHHHHHHHHHHHHHHHHHHHHHHTSC-HHHH
T ss_pred cCccccccCCCCcccHHHHHhcC--C---------CCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-Ccch
Confidence 754 2222 3467999998762 1 4432 2789999999999999999999999999999 863
Q ss_pred -hh---HHHHhhccC-ceeEEeccCCCCCCC--CCccccCCCCCCceeEEecCCCCceEEE-eCCeEEEeccCCCceEEe
Q 035820 214 -LH---YREFFEEGC-SIMRCNNYPTCQASD--LALGTGPHCDPTSLTILHQDQVGGLEVF-ANNRWQSVRPRDDALVIN 285 (382)
Q Consensus 214 -~~---~~~~~~~~~-~~lr~~~Yp~~~~~~--~~~g~~~HtD~~~lTlL~qd~~~GLqv~-~~g~W~~V~p~pg~~vVn 285 (382)
++ |.+.+.+.. +.||++|||||+.++ ..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||
T Consensus 134 ~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVN 213 (280)
T 3on7_A 134 AKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIIN 213 (280)
T ss_dssp TTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEE
T ss_pred hhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEE
Confidence 32 666666554 899999999999765 5799999999999999999999999998 689999999999999999
Q ss_pred cccccccccCCeecCcccccccCC----CCCeEEEEeeecCCCCceeeCCCCccCCCCCCCCCCCCHHHHHHHH
Q 035820 286 IGDTFTALSNGKYMSCLHRAVVNR----FTERRSLAFFLCPREDKVVRPPQDLICRQGTRIYPDFTWSDLLEFT 355 (382)
Q Consensus 286 vGd~le~~SnG~~kS~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~ 355 (382)
+||+||+||||+|||++|||+.++ ..+|||++||++|+.|++|.| ++|++||++..
T Consensus 214 iGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~r 273 (280)
T 3on7_A 214 IGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMER 273 (280)
T ss_dssp ECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHH
T ss_pred cChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHH
Confidence 999999999999999999998763 468999999999999999984 58999999843
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.43 E-value=0.042 Score=49.70 Aligned_cols=104 Identities=19% Similarity=0.123 Sum_probs=64.7
Q ss_pred HHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCC-----------ceeEEec--C----CC
Q 035820 199 GITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPT-----------SLTILHQ--D----QV 261 (382)
Q Consensus 199 ~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d----~~ 261 (382)
.|.+.|..+|+ ....++...+.....-+++++|.+-. -..+|.|.. .+|+++. | +.
T Consensus 74 ~l~~~i~~~l~-~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~G 146 (243)
T 3dkq_A 74 ALGQQIMDRLL-AHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQG 146 (243)
T ss_dssp HHHHHHHHHHH-TCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEE
T ss_pred HHHHHHHHHHc-cCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCC
Confidence 33444455555 44333332233333458889997632 256676652 5666665 3 23
Q ss_pred CceEEEeCCeEEEeccCCCceEEecccccccccCCeecCcccccccCCCCCeEEEEeeec
Q 035820 262 GGLEVFANNRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLC 321 (382)
Q Consensus 262 ~GLqv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~ 321 (382)
|.|.+.....=..|+|..|.+|+.-. .++|+|..-....|++++.+++
T Consensus 147 Getvf~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 147 GELVIQDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp CCEEEEETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ceEEEeeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 45666665445789999999998642 3689996545578999999886
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.05 E-value=2.6 Score=37.07 Aligned_cols=43 Identities=21% Similarity=0.200 Sum_probs=32.9
Q ss_pred CeEEEeccCCCceEEecccccccccCCeecCcccccccCC-CCCeEEEEeeecCCC
Q 035820 270 NRWQSVRPRDDALVINIGDTFTALSNGKYMSCLHRAVVNR-FTERRSLAFFLCPRE 324 (382)
Q Consensus 270 g~W~~V~p~pg~~vVnvGd~le~~SnG~~kS~~HRV~~~~-~~~R~Si~~F~~P~~ 324 (382)
..+..|.|.+|.+||.-+. ..|+|..+. +.+|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3567899999999988664 369997654 468999999988764
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=88.82 E-value=0.88 Score=41.03 Aligned_cols=79 Identities=19% Similarity=0.307 Sum_probs=54.3
Q ss_pred eEEeccCCCCCCCCCccccCCCCCC-----ceeEEec--C-C-----CCceEEEeCC--eEEEeccCCCceEEecccccc
Q 035820 227 MRCNNYPTCQASDLALGTGPHCDPT-----SLTILHQ--D-Q-----VGGLEVFANN--RWQSVRPRDDALVINIGDTFT 291 (382)
Q Consensus 227 lr~~~Yp~~~~~~~~~g~~~HtD~~-----~lTlL~q--d-~-----~~GLqv~~~g--~W~~V~p~pg~~vVnvGd~le 291 (382)
+.+.+|++. .-....|.|.. .+|+++. + . .|.|.++.++ ....|.|..|.+|+.-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 667888751 12356677762 6888875 2 1 3446777554 6789999999999886431
Q ss_pred cccCCeecCcccccccCCCCCeEEEEeeec
Q 035820 292 ALSNGKYMSCLHRAVVNRFTERRSLAFFLC 321 (382)
Q Consensus 292 ~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~ 321 (382)
-.+|+|.. ....|+||+..+.
T Consensus 192 --------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 --------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp --------TCCEEECC-BSSCEEEEEEEEE
T ss_pred --------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899864 5679999988765
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=85.32 E-value=1.5 Score=38.61 Aligned_cols=104 Identities=17% Similarity=0.147 Sum_probs=61.1
Q ss_pred HHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCC--------------CceeEEec--C-CCC
Q 035820 200 ITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDP--------------TSLTILHQ--D-QVG 262 (382)
Q Consensus 200 ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~--------------~~lTlL~q--d-~~~ 262 (382)
|.+.|+..+| ++... ..-+++.+|.+-.. ..+|.|. ..+|+|+. | ..|
T Consensus 82 i~~ri~~~~g-l~~~~--------~e~~qv~rY~~G~~------y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~G 146 (224)
T 2jig_A 82 IEKRVAQVTM-IPLEN--------HEGLQVLHYHDGQK------YEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEG 146 (224)
T ss_dssp HHHHHHHHHT-CCGGG--------BCCCEEEEEETTCC------EEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEE
T ss_pred HHHHHHHHhC-CCccc--------ccceEEEecCCCcc------ccCcccCCCCccccccccCCCeEEEEEEEecCCCCC
Confidence 3334444567 76421 22477888866322 4456663 24888865 3 223
Q ss_pred c-eEEEeCC-------------eEEEeccCCCceEEecccccccccCCee-cCcccccccCCCCCeEEEEeeecC
Q 035820 263 G-LEVFANN-------------RWQSVRPRDDALVINIGDTFTALSNGKY-MSCLHRAVVNRFTERRSLAFFLCP 322 (382)
Q Consensus 263 G-Lqv~~~g-------------~W~~V~p~pg~~vVnvGd~le~~SnG~~-kS~~HRV~~~~~~~R~Si~~F~~P 322 (382)
| +.+...+ .-+.|.|..|.+|+.-- ...+|.. ..++|+|..-....|+++..+++-
T Consensus 147 GeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 147 GETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp CCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred CceeCCCcccccccccccccccCceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 3 4443211 24899999999887643 1223322 578999865445689999988763
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=84.18 E-value=1.9 Score=38.00 Aligned_cols=103 Identities=18% Similarity=0.082 Sum_probs=60.5
Q ss_pred HHHHHHHHHcCCCChhhHHHHhhccCceeEEeccCCCCCCCCCccccCCCCCC-----------ceeEEec--C-CCCce
Q 035820 199 GITELLAISLGINDRLHYREFFEEGCSIMRCNNYPTCQASDLALGTGPHCDPT-----------SLTILHQ--D-QVGGL 264 (382)
Q Consensus 199 ~ll~~la~~Lg~l~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d-~~~GL 264 (382)
+|.+.|+..+| ++.+ ...-+++.+|.+... ..+|.|.. .+|+++. | ..||=
T Consensus 94 ~i~~Ri~~~~g-l~~~--------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGe 158 (216)
T 3itq_A 94 KIEKRISSIMN-VPAS--------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGE 158 (216)
T ss_dssp HHHHHHHHHHT-SCGG--------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECC
T ss_pred HHHHHHHHhcC-ceec--------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCce
Confidence 34444555578 7642 123477888865332 45666653 4788876 3 22332
Q ss_pred EEEeCCeEEEeccCCCceEEecccccccccCCe-ecCcccccccCCCCCeEEEEeeec
Q 035820 265 EVFANNRWQSVRPRDDALVINIGDTFTALSNGK-YMSCLHRAVVNRFTERRSLAFFLC 321 (382)
Q Consensus 265 qv~~~g~W~~V~p~pg~~vVnvGd~le~~SnG~-~kS~~HRV~~~~~~~R~Si~~F~~ 321 (382)
-+..+ .=+.|+|..|.+|+.-.- ..+|. -..++|++..-....|+++..+++
T Consensus 159 T~Fp~-~~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 159 TFFPK-LNLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp EEETT-TTEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred eEecC-CCCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 23322 127899999998876431 11222 246799986544568999988775
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=80.07 E-value=5.7 Score=35.38 Aligned_cols=84 Identities=15% Similarity=0.093 Sum_probs=53.0
Q ss_pred eeEEeccCCCCCCCCCccccCCCCC--------CceeEEecCCCCceEEEe-C----------CeEEEeccCCCceEEec
Q 035820 226 IMRCNNYPTCQASDLALGTGPHCDP--------TSLTILHQDQVGGLEVFA-N----------NRWQSVRPRDDALVINI 286 (382)
Q Consensus 226 ~lr~~~Yp~~~~~~~~~g~~~HtD~--------~~lTlL~qd~~~GLqv~~-~----------g~W~~V~p~pg~~vVnv 286 (382)
.+-+|+|.+- .-++++|.|- .+.||-+-. ..=+.+.. . +..+.+.-.+|+++|.-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 4678999763 2378889884 233333321 12334432 1 46899999999999999
Q ss_pred ccccccccCCeecCcccccccCCCCCeEEEEeeec
Q 035820 287 GDTFTALSNGKYMSCLHRAVVNRFTERRSLAFFLC 321 (382)
Q Consensus 287 Gd~le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~ 321 (382)
|+.=..|.-|.-+.. .....|+|+.|=.-
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 987666654433211 13568999998653
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=78.01 E-value=5.1 Score=34.76 Aligned_cols=80 Identities=15% Similarity=0.053 Sum_probs=49.9
Q ss_pred eeEEeccCCCCCCCCCccccCCCCCC--------ceeEEecCCCCceEEEeC----------CeEEEeccCCCceEEecc
Q 035820 226 IMRCNNYPTCQASDLALGTGPHCDPT--------SLTILHQDQVGGLEVFAN----------NRWQSVRPRDDALVINIG 287 (382)
Q Consensus 226 ~lr~~~Yp~~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqv~~~----------g~W~~V~p~pg~~vVnvG 287 (382)
.+-+|+|.+-. -++++|.|-. +++|-+. ...-+.+... +..+.+...+|+++|.-|
T Consensus 101 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 45689997632 3688898862 2233332 1223444321 257889999999999988
Q ss_pred cccccccCCeecCcccccccC--CCCCeEEEEee
Q 035820 288 DTFTALSNGKYMSCLHRAVVN--RFTERRSLAFF 319 (382)
Q Consensus 288 d~le~~SnG~~kS~~HRV~~~--~~~~R~Si~~F 319 (382)
++=..|. |.|-.. ....|+|+.|=
T Consensus 175 ~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhhheeE--------eeccccCCCCCCEEEEEee
Confidence 8665565 554322 23679999884
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=64.70 E-value=17 Score=31.58 Aligned_cols=79 Identities=15% Similarity=0.082 Sum_probs=50.0
Q ss_pred eeEEeccCCCCCCCCCccccCCCCC-----C--ceeEEecCCCCceEEEe---CCeEEEeccCCCceEEecccccccccC
Q 035820 226 IMRCNNYPTCQASDLALGTGPHCDP-----T--SLTILHQDQVGGLEVFA---NNRWQSVRPRDDALVINIGDTFTALSN 295 (382)
Q Consensus 226 ~lr~~~Yp~~~~~~~~~g~~~HtD~-----~--~lTlL~qd~~~GLqv~~---~g~W~~V~p~pg~~vVnvGd~le~~Sn 295 (382)
.+-+|+|.+ +. ++++|.|- + +++|-+-. ..-+.+.. .+..+.+...+|+++|.-|+.- .|
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~-- 175 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF-- 175 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC--
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchHH-ce--
Confidence 467899976 23 78999992 2 23333321 23344432 3678899999999999988763 23
Q ss_pred CeecCcccccccCC-------CCCeEEEEeee
Q 035820 296 GKYMSCLHRAVVNR-------FTERRSLAFFL 320 (382)
Q Consensus 296 G~~kS~~HRV~~~~-------~~~R~Si~~F~ 320 (382)
.|.|.... ...|+|+.|-.
T Consensus 176 ------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 ------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp ------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 36664332 24699998854
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=64.00 E-value=8.1 Score=36.45 Aligned_cols=93 Identities=14% Similarity=0.125 Sum_probs=59.7
Q ss_pred ceeEEeccCCCCCCCCCccccCCCCCC------ceeEEecCCCCceEEE-eCCeEEEeccCCCceEEecccccccccCCe
Q 035820 225 SIMRCNNYPTCQASDLALGTGPHCDPT------SLTILHQDQVGGLEVF-ANNRWQSVRPRDDALVINIGDTFTALSNGK 297 (382)
Q Consensus 225 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~------~lTlL~qd~~~GLqv~-~~g~W~~V~p~pg~~vVnvGd~le~~SnG~ 297 (382)
..+-+|+|.+- . ++++|.|-. ++||-+- ...-+.+. ++|.++.+...+|+++|.-|+.=..|.-|.
T Consensus 198 n~~lvN~Y~~G-----~-~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I 270 (345)
T 3tht_A 198 DQMTINQYEPG-----Q-GIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGI 270 (345)
T ss_dssp SEEEEEEECTT-----C-CEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEE
T ss_pred CEEEEEEecCC-----C-CEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccC
Confidence 45678999762 2 789999974 3333332 12334444 347799999999999999999888886554
Q ss_pred ecCcccccc------------------cCCCCCeEEEEeeecCCC
Q 035820 298 YMSCLHRAV------------------VNRFTERRSLAFFLCPRE 324 (382)
Q Consensus 298 ~kS~~HRV~------------------~~~~~~R~Si~~F~~P~~ 324 (382)
-+-...-+- ......|+|+.|=.-+..
T Consensus 271 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 271 TCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred CcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 443222210 112356999999876654
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=44.43 E-value=9.6 Score=37.21 Aligned_cols=52 Identities=10% Similarity=0.151 Sum_probs=38.1
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhc
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFF 116 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF 116 (382)
.-||.||++++.++. +.++..+.+++.|++.|.|. ||.+......+.+.+|.
T Consensus 99 ~~iP~i~f~di~~~~------~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl 150 (461)
T 2dbn_A 99 AVWPVLSYADIKAGH------VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYL 150 (461)
T ss_dssp CSSCEEEHHHHHHTC------CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCCC------CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHH
Confidence 459999999875332 12245678899999987776 89888887777777765
No 17
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=43.54 E-value=51 Score=30.62 Aligned_cols=47 Identities=17% Similarity=0.084 Sum_probs=33.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC----HHHHHHHHHHhhhhcC
Q 035820 68 FFRGDEVATQRAARIIKDACMSHGFFQVINHGID----ASLISAAHDQIDNFFK 117 (382)
Q Consensus 68 l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~----~~l~~~~~~~~~~FF~ 117 (382)
|..+++++ +.+++.+.++.-||..=.+|||+ .+-++.+.+++++|++
T Consensus 298 l~~g~~e~---i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVDK---IKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHHH---HHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHHH---HHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 44566543 34455666777888666689876 5889999999999985
No 18
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=40.35 E-value=26 Score=32.09 Aligned_cols=63 Identities=17% Similarity=0.101 Sum_probs=42.4
Q ss_pred cccCCCCC--------CceeEEec-CCCCceEEEeCCeEEEeccCCCc-eEEecccccccccCCeecCcccccccCCCCC
Q 035820 243 GTGPHCDP--------TSLTILHQ-DQVGGLEVFANNRWQSVRPRDDA-LVINIGDTFTALSNGKYMSCLHRAVVNRFTE 312 (382)
Q Consensus 243 g~~~HtD~--------~~lTlL~q-d~~~GLqv~~~g~W~~V~p~pg~-~vVnvGd~le~~SnG~~kS~~HRV~~~~~~~ 312 (382)
.+.+|.|+ +.+.+... ...+|..+..+|+-+..++ |. .++| -+..|.|.+.++.+
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d-------------~~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLD-------------AATVHSAVNFSEIS 167 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECC-------------TTSCEEEEESSSSC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEc-------------CCCeeEEEcCCCCC
Confidence 47889998 33445543 2457777777776655555 43 3333 24579999999999
Q ss_pred eEEEEeee
Q 035820 313 RRSLAFFL 320 (382)
Q Consensus 313 R~Si~~F~ 320 (382)
|+.+.+=+
T Consensus 168 RIhLv~D~ 175 (290)
T 1e5r_A 168 RQSLCVDF 175 (290)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEe
Confidence 99998755
No 19
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=37.49 E-value=12 Score=35.83 Aligned_cols=52 Identities=13% Similarity=0.069 Sum_probs=37.8
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhcCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFFKL 118 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF~l 118 (382)
++|.||++++... ++...++.+|+.++|+..+.|-.++.+.. .+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~-----d~~~~~~~~~l~~~Gvv~frg~~~~~~~~---~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY-----DEHAYKWLSTLKKVGIVRLTGASDKPGEV---SKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC-----HHHHHHHHHHHHHHSEEEEECCCSSTTHH---HHHHHHHSCC
T ss_pred CCCccCHHHHhcC-----HHHHHHHHHHHHhcCEEEEeCCCCCHHHH---HHHHHHhCCC
Confidence 6899999876532 24456899999999999999988875443 4455555443
No 20
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=36.21 E-value=37 Score=19.79 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=14.6
Q ss_pred HHHHHHHHHHhhcCeEE
Q 035820 78 RAARIIKDACMSHGFFQ 94 (382)
Q Consensus 78 ~~~~~l~~A~~~~GFF~ 94 (382)
++++.+.-.|.+-|||+
T Consensus 10 ~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHhccCcccc
Confidence 56778888999999998
No 21
>3pnt_A NAD+-glycohydrolase; glycohydrolase, NAD+, virulence factor, hydrolase-hydrolase complex; 2.80A {Streptococcus pyogenes}
Probab=35.50 E-value=40 Score=29.04 Aligned_cols=53 Identities=23% Similarity=0.453 Sum_probs=38.5
Q ss_pred CCCCCCCccCCCCCCCCCCCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCC
Q 035820 37 QTNLPVEFTWSKGDLVSSHGELMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHG 99 (382)
Q Consensus 37 ~~~vP~~~i~p~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHG 99 (382)
+..||.+=+|.-+......+.+-.|.||...+.. +.+..|.+..|+|-|+|.-
T Consensus 188 sLNIPG~qTwaGkni~~SeSELimPSId~kgls~----------~dvLaaIe~kGYyEI~nPt 240 (268)
T 3pnt_A 188 SLNIPGCQTWSGKHIENSESELIFPSISVKDLKS----------KAVLAEIDAKGYFEIIDPT 240 (268)
T ss_dssp TTCCTTTCCCCTTCGGGCCCCEEECEEECTTCCH----------HHHHHHHHHHSCCEEESCE
T ss_pred ccCCCcccccccccccccccceeecccccCCCcH----------HHHHHHHhhcCeEEecCCe
Confidence 5678887777655544334455689999998853 2567888999999999854
No 22
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.08 E-value=23 Score=25.17 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=35.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHhh
Q 035820 180 EQTGIIYQKYCEAMKCLSLGITELLAISLGINDRLHYREFFE 221 (382)
Q Consensus 180 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg~l~~~~~~~~~~ 221 (382)
.+-+.+++.|+..-.+-...-+..||..+| |+.+...-.|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lg-L~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVG-LPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCHHHHHHHHh
Confidence 445788999999888888888999999999 99998888774
No 23
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=30.97 E-value=96 Score=25.72 Aligned_cols=41 Identities=15% Similarity=0.153 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhcC-eEEEEeC-CCCHHHHHHHHHHhhh
Q 035820 74 VATQRAARIIKDACMSHG-FFQVINH-GIDASLISAAHDQIDN 114 (382)
Q Consensus 74 ~~r~~~~~~l~~A~~~~G-FF~v~nH-GI~~~l~~~~~~~~~~ 114 (382)
+.+.+++++|.+.+++.. .++|+++ |++...+.++....++
T Consensus 4 ~~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 4 KRNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356778889999999998 7777764 8998777777766653
No 24
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=30.92 E-value=23 Score=30.57 Aligned_cols=37 Identities=24% Similarity=0.314 Sum_probs=27.6
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++++... ++. ++++.+.+++.+.-.+.|.|||+=
T Consensus 125 ~v~~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~~ 161 (212)
T 2opi_A 125 EIPVIPYYRP--GSP----ELAKAVVEAMLKHNSVLLTNHGQV 161 (212)
T ss_dssp CCCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEEE
T ss_pred CeEEEcCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCcE
Confidence 6999998754 232 456678888888888888899953
No 25
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=30.87 E-value=93 Score=26.61 Aligned_cols=43 Identities=16% Similarity=0.079 Sum_probs=30.5
Q ss_pred eEEecccccccccCCee----cCcccccccCCCCCeEEEEe-eecCCC
Q 035820 282 LVINIGDTFTALSNGKY----MSCLHRAVVNRFTERRSLAF-FLCPRE 324 (382)
Q Consensus 282 ~vVnvGd~le~~SnG~~----kS~~HRV~~~~~~~R~Si~~-F~~P~~ 324 (382)
..+.||+.-..|..|+. -|-.|.|...++..|+-+.+ |.+|+.
T Consensus 139 ~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl 186 (197)
T 3rcq_A 139 CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPEL 186 (197)
T ss_dssp EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTS
T ss_pred cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCC
Confidence 34556777777777754 36689999888889987765 455654
No 26
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=30.18 E-value=97 Score=25.89 Aligned_cols=41 Identities=2% Similarity=0.135 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhhcCeEEEEeC-CCCHHHHHHHHHHhhh
Q 035820 74 VATQRAARIIKDACMSHGFFQVINH-GIDASLISAAHDQIDN 114 (382)
Q Consensus 74 ~~r~~~~~~l~~A~~~~GFF~v~nH-GI~~~l~~~~~~~~~~ 114 (382)
+.+.+++++|.+.+++...++|+++ |++...+.++....++
T Consensus 6 ~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 6 QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 4567888899999999999988875 8998777777766654
No 27
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=28.96 E-value=36 Score=22.39 Aligned_cols=29 Identities=14% Similarity=0.165 Sum_probs=17.9
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.-+...+.++++++++.|.+++.+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~ 29 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMAN 29 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 45555433333566777777777777765
No 28
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=27.72 E-value=40 Score=22.14 Aligned_cols=29 Identities=10% Similarity=0.143 Sum_probs=18.4
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|.|.+.-+...+.++++++++.|.+++.+
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~ 29 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKE 29 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 55555433334666777777777777765
No 29
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=26.79 E-value=88 Score=31.70 Aligned_cols=83 Identities=19% Similarity=0.200 Sum_probs=50.5
Q ss_pred eEEeccCCCCCCCCCccccCCCCC-C--ceeEEec--C--------CCCceEEEeC--------CeEEEeccCCCceEEe
Q 035820 227 MRCNNYPTCQASDLALGTGPHCDP-T--SLTILHQ--D--------QVGGLEVFAN--------NRWQSVRPRDDALVIN 285 (382)
Q Consensus 227 lr~~~Yp~~~~~~~~~g~~~HtD~-~--~lTlL~q--d--------~~~GLqv~~~--------g~W~~V~p~pg~~vVn 285 (382)
+.++.|++- -.+..|.|. + .||+++. + ..|-|+++.. .....|.|..|.+|+.
T Consensus 126 ~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 667788652 247778884 2 3666653 2 2344888632 2467899999999987
Q ss_pred cccccccccCCeecCccccccc-CCCCCeEEEEeeec-CCC
Q 035820 286 IGDTFTALSNGKYMSCLHRAVV-NRFTERRSLAFFLC-PRE 324 (382)
Q Consensus 286 vGd~le~~SnG~~kS~~HRV~~-~~~~~R~Si~~F~~-P~~ 324 (382)
.-. -| ...|.|.- ..++.|+||+-.++ |..
T Consensus 200 ~vs------p~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 200 KVL------PG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp ECC------TT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred EcC------CC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 421 01 24676521 12788999976654 544
No 30
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=26.46 E-value=1.2e+02 Score=26.26 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhhcCeEEEEe-CCCCHHHHHHHHHHhhh
Q 035820 74 VATQRAARIIKDACMSHGFFQVIN-HGIDASLISAAHDQIDN 114 (382)
Q Consensus 74 ~~r~~~~~~l~~A~~~~GFF~v~n-HGI~~~l~~~~~~~~~~ 114 (382)
+.+.+++++|.+.+.++..++|++ +|++...++++.+..++
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 456788899999999999888886 58999888888887764
No 31
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=26.08 E-value=65 Score=21.48 Aligned_cols=28 Identities=14% Similarity=0.116 Sum_probs=18.9
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.- ...+.++++++++.|.+++.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHH
Confidence 5555554 344677788888888877765
No 32
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=25.92 E-value=31 Score=29.80 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=27.4
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++++... ++. ++++.+.+++.+.-.+.|.|||+=
T Consensus 122 ~ip~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~~ 158 (215)
T 1e4c_P 122 SIPCAPYATF--GTR----ELSEHVALALKNRKATLLQHHGLI 158 (215)
T ss_dssp CBCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEEE
T ss_pred CcceeeCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCcE
Confidence 6899988754 232 556678888888888888899953
No 33
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=23.46 E-value=65 Score=18.09 Aligned_cols=14 Identities=14% Similarity=0.117 Sum_probs=10.9
Q ss_pred ceEEEeCCeEEEec
Q 035820 263 GLEVFANNRWQSVR 276 (382)
Q Consensus 263 GLqv~~~g~W~~V~ 276 (382)
-..|+++|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 45678999999764
No 34
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=23.30 E-value=40 Score=28.82 Aligned_cols=36 Identities=25% Similarity=0.205 Sum_probs=26.1
Q ss_pred CCcee-eCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCC
Q 035820 59 MEPVV-DLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGI 100 (382)
Q Consensus 59 ~IPvI-Dls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI 100 (382)
.||++ ++... ++. ++++.+.+++.+.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS--ATE----EAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS--SSH----HHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC--CcH----HHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 77654 232 45667777887878888889994
No 35
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=22.90 E-value=76 Score=28.28 Aligned_cols=50 Identities=12% Similarity=0.062 Sum_probs=35.0
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHHHHHhhhhc
Q 035820 58 LMEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGIDASLISAAHDQIDNFF 116 (382)
Q Consensus 58 ~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~FF 116 (382)
.+|+-|||+... +.+ ..++|.+++.++|+..+.+-.++.+.. .+.++.|-
T Consensus 16 aei~gvdl~~~l--~~~----~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPL--SDN----QFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCC--CHH----HHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred EEEECCCcCccC--CHH----HHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 357788998854 222 345799999999999999888776543 34455554
No 36
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=22.36 E-value=57 Score=21.92 Aligned_cols=29 Identities=7% Similarity=0.078 Sum_probs=18.5
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFFRGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 89 (382)
|+|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444433334667778888888877766
No 37
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=21.99 E-value=59 Score=21.19 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=20.4
Q ss_pred CceeeCCCCCCCCHHHHHHHHHHHHHHHhhc
Q 035820 60 EPVVDLEGFFRGDEVATQRAARIIKDACMSH 90 (382)
Q Consensus 60 IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~ 90 (382)
.|.|.+.-+...+.+++++++++|.+++.+.
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~ 33 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKT 33 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 4677665443345667777888887777663
No 38
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=21.86 E-value=46 Score=29.19 Aligned_cols=37 Identities=16% Similarity=0.071 Sum_probs=27.3
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHHhhcCeEEEEeCCCC
Q 035820 59 MEPVVDLEGFFRGDEVATQRAARIIKDACMSHGFFQVINHGID 101 (382)
Q Consensus 59 ~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFF~v~nHGI~ 101 (382)
.||++++... ++. ++++.+.+++.+.-.+.+.|||+=
T Consensus 161 ~v~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~~ 197 (238)
T 1pvt_A 161 GISVVEFEKP--GSV----ELGLKTVEKSEGKDAVLWDKHGVV 197 (238)
T ss_dssp CCEEECCCST--TCH----HHHHHHHHHTSSCSEEEETTSCEE
T ss_pred CceEecCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCce
Confidence 6999998654 332 456677788888888888899954
No 39
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=20.48 E-value=78 Score=22.06 Aligned_cols=43 Identities=26% Similarity=0.350 Sum_probs=26.8
Q ss_pred ceeeCCCCCCC-CHHHHHHHHHHHHHHHhhc-C----eEEEEeCCCCHH
Q 035820 61 PVVDLEGFFRG-DEVATQRAARIIKDACMSH-G----FFQVINHGIDAS 103 (382)
Q Consensus 61 PvIDls~l~~~-d~~~r~~~~~~l~~A~~~~-G----FF~v~nHGI~~~ 103 (382)
|+|.+.-+... +.++++++++.|.+++.+. | -++|+-+.++.+
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~~lgip~~~v~V~i~e~~~~ 49 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPE 49 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEECCGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHhCcCCceEEEEEEEeChH
Confidence 55665434344 6788889999999988763 4 334444444443
No 40
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=20.41 E-value=73 Score=21.53 Aligned_cols=29 Identities=10% Similarity=0.126 Sum_probs=17.8
Q ss_pred ceeeCCCCC---CCCHHHHHHHHHHHHHHHhh
Q 035820 61 PVVDLEGFF---RGDEVATQRAARIIKDACMS 89 (382)
Q Consensus 61 PvIDls~l~---~~d~~~r~~~~~~l~~A~~~ 89 (382)
|.|.+.-+. ..+.++++++++.|.+++.+
T Consensus 1 P~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~ 32 (67)
T 3m21_A 1 PFINIKLVPENGGPTNEQKQQLIEGVSDLMVK 32 (67)
T ss_dssp CEEEEEECCBTTBSCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 555555443 34666777777777777654
Done!