BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035824
(121 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224128874|ref|XP_002328988.1| predicted protein [Populus trichocarpa]
gi|222839222|gb|EEE77573.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 104/120 (86%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKEAWLIE L K E+PK P EAYDPEILT+EE+HYLKRT EKKKNYV VGRRG+FGG
Sbjct: 149 KAKRKEAWLIEKLRKLEVPKTPGEAYDPEILTEEEKHYLKRTGEKKKNYVPVGRRGVFGG 208
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWKKHETVKV KPC+P +I EYAE LA+LSKGI IDI P NTIIFYRGKNYV
Sbjct: 209 VVLNMHLHWKKHETVKVTCKPCKPGQIDEYAEELARLSKGIAIDIRPDNTIIFYRGKNYV 268
>gi|356511313|ref|XP_003524371.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/120 (78%), Positives = 106/120 (88%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L KF++PK P E YDPEILT+EERHYLKRT E+KK+YV VGRRG+FGG
Sbjct: 95 KAKRKETWLIEKLRKFDVPKPPPETYDPEILTEEERHYLKRTGERKKHYVPVGRRGVFGG 154
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWK HETVKV+ KPC+P ++HEYAE LA+LSKGIVIDI P+NTIIFYRGKNYV
Sbjct: 155 VVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYV 214
>gi|356524301|ref|XP_003530768.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/120 (77%), Positives = 107/120 (89%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WL+E L KF++PK+P E +DPEILT+EERHYLKRT EKKK+YV VGRRG+FGG
Sbjct: 95 KAKRKETWLVEKLRKFDVPKSPPETFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGG 154
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWK HETVKV+ KPC+P ++HEYAE LA+LSKGIVIDI P+NTIIFYRGKNYV
Sbjct: 155 VVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYV 214
>gi|225444203|ref|XP_002270373.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Vitis vinifera]
gi|296089227|emb|CBI38999.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/120 (79%), Positives = 108/120 (90%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L KF++PKAPTEAYDPEILT+EE+ YLKRT EKKKNYV VGRRG+FGG
Sbjct: 92 KAKRKEEWLIEKLRKFDIPKAPTEAYDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGG 151
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWKKHETVKV+ KPC+ +++EYAE LA+LSKGI+IDI P+NTIIFYRGKNYV
Sbjct: 152 VVLNMHLHWKKHETVKVICKPCKVGQVYEYAEELARLSKGIMIDIKPNNTIIFYRGKNYV 211
>gi|449438181|ref|XP_004136868.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 352
Score = 200 bits (509), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 92/120 (76%), Positives = 106/120 (88%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKEAWLIE L KFE+PK E YDPEILT+EE+HYLKRT EKKKN+V +GRRG+FGG
Sbjct: 168 KAKRKEAWLIEKLRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGG 227
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMH+HWKKHETVKV+ KPC+P ++HEYAE L +LSKGIVIDI P+N+IIFYRGKNYV
Sbjct: 228 VVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYV 287
>gi|357478871|ref|XP_003609721.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355510776|gb|AES91918.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 399
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/120 (77%), Positives = 105/120 (87%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L KF++PK PTE +DPEILT+EERHYLKRT EKKK+YV VGRRG+FGG
Sbjct: 222 KAKRKETWLIEKLRKFDVPKLPTETFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGG 281
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWK HETVKV+ KPC+P + HEYAE LA+LSKGIVIDI P++ IIFYRGKNYV
Sbjct: 282 VVLNMHLHWKNHETVKVICKPCKPGQAHEYAEELARLSKGIVIDIKPNSIIIFYRGKNYV 341
>gi|449479099|ref|XP_004155504.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 290
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/120 (76%), Positives = 106/120 (88%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKEAWLIE L KFE+PK E YDPEILT+EE+HYLKRT EKKKN+V +GRRG+FGG
Sbjct: 106 KAKRKEAWLIEKLRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGG 165
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMH+HWKKHETVKV+ KPC+P ++HEYAE L +LSKGIVIDI P+N+IIFYRGKNYV
Sbjct: 166 VVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYV 225
>gi|255567361|ref|XP_002524660.1| conserved hypothetical protein [Ricinus communis]
gi|223536021|gb|EEF37679.1| conserved hypothetical protein [Ricinus communis]
Length = 260
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/120 (75%), Positives = 107/120 (89%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKEAWLIE L+KFE+PK E DPE+LT+EE+HYLKRT EKKKN++ VGRRG+FGG
Sbjct: 76 KAKRKEAWLIEKLSKFEVPKLRAETCDPEMLTEEEKHYLKRTGEKKKNFILVGRRGVFGG 135
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWKKHETVK++ KPC+P +IH+YAE LA+LSKGIVIDI P+N+IIFYRGKNYV
Sbjct: 136 VVLNMHLHWKKHETVKIICKPCKPGQIHQYAEELARLSKGIVIDIRPNNSIIFYRGKNYV 195
>gi|357521229|ref|XP_003630903.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355524925|gb|AET05379.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 318
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/120 (75%), Positives = 102/120 (85%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L KF++PK PTE +DPEILT+EERHYLKRT EKKK+YV VGRRG+FG
Sbjct: 157 KAKRKETWLIEKLRKFDVPKLPTETFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGE 216
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWKKHETVKV+ KPC+P + HEY E L + SKGIVIDI P+N IIFYRG+NYV
Sbjct: 217 VVLNMHLHWKKHETVKVICKPCKPGQAHEYTEELTRPSKGIVIDIKPNNIIIFYRGRNYV 276
>gi|326525483|dbj|BAJ88788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/120 (75%), Positives = 103/120 (85%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L K+E P+AP +DPEILT+EE+ YLKRT EKKKNYV VGRRG+FGG
Sbjct: 143 KAKRKEEWLIEKLRKYEAPRAPEPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGG 202
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWKKHET+KVV KPC P +++EYAE LA+LSKG VIDI P+NTIIFYRGKNYV
Sbjct: 203 VVLNMHLHWKKHETMKVVCKPCRPGQVYEYAEELARLSKGTVIDIKPNNTIIFYRGKNYV 262
>gi|357124470|ref|XP_003563923.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 337
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/120 (75%), Positives = 103/120 (85%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L K+E+P+ P +DPEILT+EE+ YLKRT EKKKNYV VGRRG+FGG
Sbjct: 140 KAKRKEEWLIEKLRKYEVPRVPEPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGG 199
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWKKHET+KVV KPC P +++EYAE LA+LSKG VIDI P+NTIIFYRGKNYV
Sbjct: 200 VVLNMHLHWKKHETMKVVCKPCRPGQVYEYAEELARLSKGTVIDIKPNNTIIFYRGKNYV 259
>gi|115467732|ref|NP_001057465.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|113595505|dbj|BAF19379.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|125596971|gb|EAZ36751.1| hypothetical protein OsJ_21087 [Oryza sativa Japonica Group]
Length = 348
Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 103/120 (85%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L K+E+P++P +DPEILT+EE+ YLKRT EKKKNYV VGRRG+FGG
Sbjct: 152 KAKRKEEWLIEKLRKYEVPRSPEPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGG 211
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWKKHETVKV+ KPC P +++EYAE L +LSKG VIDI P+NTIIFYRGKNYV
Sbjct: 212 VVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTRLSKGTVIDIKPNNTIIFYRGKNYV 271
>gi|5123948|emb|CAB45506.1| putative protein [Arabidopsis thaliana]
gi|7268009|emb|CAB78349.1| putative protein [Arabidopsis thaliana]
Length = 332
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L K+++PK+P E YDPE LT+EE+HYLKRT EK+KN+V VGRRG+FGG
Sbjct: 141 KAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGG 200
Query: 62 VVLNMHLHWKKHETVKVVSKPC-EPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VVLN+HLHWKKHETVKV+ KPC +P ++HEYAE LA+LSKGIVID+ P+NTI+ YRGKNY
Sbjct: 201 VVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNY 260
Query: 121 V 121
V
Sbjct: 261 V 261
>gi|125555042|gb|EAZ00648.1| hypothetical protein OsI_22670 [Oryza sativa Indica Group]
Length = 304
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 103/120 (85%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L K+E+P++P +DPEILT+EE+ YLKRT EKKKNYV VGRRG+FGG
Sbjct: 128 KAKRKEEWLIEKLRKYEVPRSPEPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGG 187
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWKKHETVKV+ KPC P +++EYAE L +LSKG VIDI P+NTIIFYRGKNYV
Sbjct: 188 VVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTRLSKGTVIDIKPNNTIIFYRGKNYV 247
>gi|42566743|ref|NP_193043.2| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|51968644|dbj|BAD43014.1| putative protein [Arabidopsis thaliana]
gi|51971084|dbj|BAD44234.1| putative protein [Arabidopsis thaliana]
gi|51971893|dbj|BAD44611.1| putative protein [Arabidopsis thaliana]
gi|63003852|gb|AAY25455.1| At4g13070 [Arabidopsis thaliana]
gi|115646846|gb|ABJ17138.1| At4g13070 [Arabidopsis thaliana]
gi|332657826|gb|AEE83226.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 343
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/121 (72%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L K+++PK+P E YDPE LT+EE+HYLKRT EK+KN+V VGRRG+FGG
Sbjct: 152 KAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGG 211
Query: 62 VVLNMHLHWKKHETVKVVSKPC-EPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VVLN+HLHWKKHETVKV+ KPC +P ++HEYAE LA+LSKGIVID+ P+NTI+ YRGKNY
Sbjct: 212 VVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNY 271
Query: 121 V 121
V
Sbjct: 272 V 272
>gi|162459283|ref|NP_001105859.1| LOC732768 [Zea mays]
gi|89212802|gb|ABD63903.1| CFM6 [Zea mays]
gi|413918693|gb|AFW58625.1| hypothetical protein ZEAMMB73_217436 [Zea mays]
Length = 338
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 102/120 (85%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L K+E+P+ P +DPEILT+EE+ YLKRT EKKKNYV VGRRG+FGG
Sbjct: 140 KAKRKEEWLIEKLRKYEVPRTPEPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGG 199
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWKKHETVKVV KPC P +++EYAE L +LSKG VIDI P+NTI+FYRGKNYV
Sbjct: 200 VVLNMHLHWKKHETVKVVCKPCRPGQVYEYAEELTRLSKGTVIDIKPNNTIMFYRGKNYV 259
>gi|297790600|ref|XP_002863185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309019|gb|EFH39444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L K+++PK+ E YDPE LT+EE+HYLKRT EK+KN+V VGRRG+FGG
Sbjct: 152 KAKRKEEWLIEKLRKYDVPKSSAEPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGG 211
Query: 62 VVLNMHLHWKKHETVKVVSKPC-EPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VVLN+HLHWKKHETVKV+ KPC +P ++HEYAE LA+LSKGIVID+ P+NTI+ YRGKNY
Sbjct: 212 VVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNY 271
Query: 121 V 121
V
Sbjct: 272 V 272
>gi|242076260|ref|XP_002448066.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
gi|241939249|gb|EES12394.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
Length = 338
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/120 (71%), Positives = 101/120 (84%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K KRKE WLIE L K+++P+ P +DPEILT+EE+ YLKRT EKKKNYV VGRRG+FGG
Sbjct: 141 KAKRKEEWLIEKLRKYDVPRTPEPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGG 200
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
VVLNMHLHWK HETVKVV KPC P +++EYAE L +LSKG +IDI P+NTI+FYRGKNYV
Sbjct: 201 VVLNMHLHWKNHETVKVVCKPCRPGQVYEYAEELTRLSKGTIIDIKPNNTIMFYRGKNYV 260
>gi|356544514|ref|XP_003540695.1| PREDICTED: uncharacterized protein LOC100796393 [Glycine max]
Length = 426
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 92/119 (77%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K + KEA LIE L ++E+PKA P+ LT EER YLK+ +K+ NY+Q+GRRG+FGG
Sbjct: 142 KARIKEALLIERLKRYEVPKAQGPVVKPDDLTGEERFYLKKMAQKRSNYLQIGRRGLFGG 201
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VVLNMH+HWKKHETVKV KPC+P ++HEYA+ LA+LS GI + I +TIIFYRGKNY
Sbjct: 202 VVLNMHMHWKKHETVKVFCKPCKPGQVHEYAQELARLSGGIPLQIIGDDTIIFYRGKNY 260
>gi|242055631|ref|XP_002456961.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
gi|241928936|gb|EES02081.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
Length = 405
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 90/120 (75%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K K KE L+E L K+E+ KA P+ L+ EER YLK+ +KK NYV VGRRG+FGG
Sbjct: 143 KAKLKEVRLVEKLKKYEVAKAQGPMAKPDDLSGEERFYLKKVSQKKSNYVPVGRRGVFGG 202
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKHETVKV+ KPC+P +I EYA +A+LS GI ++I +TI+FYRGKNYV
Sbjct: 203 VILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPVNIIGDDTIVFYRGKNYV 262
>gi|357131757|ref|XP_003567501.1| PREDICTED: uncharacterized protein LOC100829186 [Brachypodium
distachyon]
Length = 402
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 91/120 (75%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K K KEA LIE L ++E+ KA P+ L EER YLK+ +KK NYV +GRRG+FGG
Sbjct: 145 KAKLKEAMLIEKLKRYEVAKAEGPVAKPDDLNGEERFYLKKVSQKKSNYVPIGRRGVFGG 204
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKHETVKV+ KPC+P +I EYA +A+LS G+ I+I ++T++FYRGK+YV
Sbjct: 205 VILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGVPINIVGNDTVVFYRGKDYV 264
>gi|297743805|emb|CBI36688.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 89/120 (74%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K + KEA LIE L ++E+PK P LT EER Y+K+ +K+ NYV VGRRG+FGG
Sbjct: 45 KARIKEALLIERLKRYEVPKLQGPIVQPVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGG 104
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMH+HWKKHETVKV+ KPC+P ++HEYA +A+LS G I I +TIIFYRGKNYV
Sbjct: 105 VILNMHMHWKKHETVKVICKPCKPGQVHEYANEIARLSGGTPIQIIGDDTIIFYRGKNYV 164
>gi|147820521|emb|CAN67658.1| hypothetical protein VITISV_012474 [Vitis vinifera]
Length = 375
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 89/120 (74%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K + KEA LIE L ++E+PK P LT EER Y+K+ +K+ NYV VGRRG+FGG
Sbjct: 88 KARIKEALLIERLKRYEVPKLQGPIVQPVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGG 147
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMH+HWKKHETVKV+ KPC+P ++HEYA +A+LS G I I +TIIFYRGKNYV
Sbjct: 148 VILNMHMHWKKHETVKVICKPCKPGQVHEYANEIARLSGGTPIQIIGDDTIIFYRGKNYV 207
>gi|57900098|dbj|BAD88160.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900278|dbj|BAD87111.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
Length = 394
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 89/120 (74%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K K KEA L+E L K+E+ KA + L EER YLK+ +KK NYV VGRRG+FGG
Sbjct: 142 KAKLKEAMLVEKLKKYEIAKAQGPMAKQDDLDGEERFYLKKVSQKKSNYVPVGRRGVFGG 201
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKHETVKV+ KPC+P +I EYA +A+LS GI I+ ++TI+FYRGKNYV
Sbjct: 202 VILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPINTIGNDTIVFYRGKNYV 261
>gi|115442347|ref|NP_001045453.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|57900096|dbj|BAD88158.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900276|dbj|BAD87109.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|113534984|dbj|BAF07367.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|215768161|dbj|BAH00390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189771|gb|EEC72198.1| hypothetical protein OsI_05277 [Oryza sativa Indica Group]
gi|222619906|gb|EEE56038.1| hypothetical protein OsJ_04827 [Oryza sativa Japonica Group]
Length = 415
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 89/120 (74%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K K KEA L+E L K+E+ KA + L EER YLK+ +KK NYV VGRRG+FGG
Sbjct: 142 KAKLKEAMLVEKLKKYEIAKAQGPMAKQDDLDGEERFYLKKVSQKKSNYVPVGRRGVFGG 201
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKHETVKV+ KPC+P +I EYA +A+LS GI I+ ++TI+FYRGKNYV
Sbjct: 202 VILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPINTIGNDTIVFYRGKNYV 261
>gi|57900097|dbj|BAD88159.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900277|dbj|BAD87110.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|215695021|dbj|BAG90212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 417
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 89/120 (74%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K K KEA L+E L K+E+ KA + L EER YLK+ +KK NYV VGRRG+FGG
Sbjct: 142 KAKLKEAMLVEKLKKYEIAKAQGPMAKQDDLDGEERFYLKKVSQKKSNYVPVGRRGVFGG 201
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKHETVKV+ KPC+P +I EYA +A+LS GI I+ ++TI+FYRGKNYV
Sbjct: 202 VILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPINTIGNDTIVFYRGKNYV 261
>gi|226509977|ref|NP_001151028.1| CFM6 [Zea mays]
gi|195643764|gb|ACG41350.1| CFM6 [Zea mays]
gi|238011754|gb|ACR36912.1| unknown [Zea mays]
Length = 394
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 90/120 (75%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K K KEA L+E L K+E+ KA + L+ EER YLK+ +KK NYV VGRRG+FGG
Sbjct: 143 KAKLKEARLVEKLKKYEIAKAQGPMAKVDDLSGEERFYLKKVSQKKSNYVPVGRRGVFGG 202
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKHETVKV+ KPC+P +I EYA +A+LS GI +++ +TI+FYRGK+YV
Sbjct: 203 VILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPVNVIGDDTIVFYRGKSYV 262
>gi|359478175|ref|XP_002266278.2| PREDICTED: uncharacterized protein LOC100250974 [Vitis vinifera]
Length = 711
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 71/120 (59%), Positives = 89/120 (74%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K + KEA LIE L ++E+PK P LT EER Y+K+ +K+ NYV VGRRG+FGG
Sbjct: 424 KARIKEALLIERLKRYEVPKLQGPIVQPVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGG 483
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMH+HWKKHETVKV+ KPC+P ++HEYA +A+LS G I I +TIIFYRGKNYV
Sbjct: 484 VILNMHMHWKKHETVKVICKPCKPGQVHEYANEIARLSGGTPIQIIGDDTIIFYRGKNYV 543
>gi|449437795|ref|XP_004136676.1| PREDICTED: uncharacterized protein LOC101208777 [Cucumis sativus]
gi|449494725|ref|XP_004159629.1| PREDICTED: uncharacterized LOC101208777 [Cucumis sativus]
Length = 431
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 69/116 (59%), Positives = 88/116 (75%)
Query: 6 KEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLN 65
KEA LIE L ++E+PK P LT EER Y+K+ +K+ NYV +GRRG+FGGV+LN
Sbjct: 142 KEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMGQKRSNYVPIGRRGVFGGVILN 201
Query: 66 MHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
MH+HWKKHETVKV KPC+P ++HEYA+ +A+LS GI I I +TIIFYRGK+YV
Sbjct: 202 MHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYV 257
>gi|255585329|ref|XP_002533362.1| conserved hypothetical protein [Ricinus communis]
gi|223526802|gb|EEF29024.1| conserved hypothetical protein [Ricinus communis]
Length = 412
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 89/120 (74%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K KEA L+E L ++E+PK P LT EER ++K+ +K+ NYV +GRRG+FGG
Sbjct: 114 RAKIKEALLVERLKRYEVPKVQGPEVKPHDLTGEERFFMKKMAQKQSNYVPLGRRGVFGG 173
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMH+HWKKHETVKV+ C+P ++HEYA+ +A+LS GI I + +TIIFYRGKNYV
Sbjct: 174 VILNMHMHWKKHETVKVICNFCKPGQVHEYAQEIARLSGGIPIQVIGDDTIIFYRGKNYV 233
>gi|224095670|ref|XP_002310431.1| predicted protein [Populus trichocarpa]
gi|222853334|gb|EEE90881.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Query: 6 KEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLN 65
KEA L+E L ++E+PK P LT EER ++K+ +KK NYV +GRRG+FGGV+LN
Sbjct: 87 KEAKLVERLKRYEVPKMQGPEVKPHELTGEERFFMKKMAQKKSNYVPIGRRGVFGGVILN 146
Query: 66 MHLHWKKHETVKVV-SKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
MH+HWKKHETVKV+ + C+P ++ E+A+ +A+LS GI I I +T+IFYRGKNYV
Sbjct: 147 MHMHWKKHETVKVICNSSCKPGQVQEFAQEIARLSGGIPIQIIGDDTVIFYRGKNYV 203
>gi|297822421|ref|XP_002879093.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
gi|297324932|gb|EFH55352.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
Length = 345
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 86/120 (71%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K K KEA LIE L ++E+ K P +T EER YLK+ +K+ NYV +GRRG+FGG
Sbjct: 131 KAKIKEALLIEKLKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGG 190
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKHETVKV+ +P ++ +YAE LA+LS G+ ++I +TIIFYRGK YV
Sbjct: 191 VILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYV 250
>gi|15226402|ref|NP_180415.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|4510396|gb|AAD21483.1| hypothetical protein [Arabidopsis thaliana]
gi|44917583|gb|AAS49116.1| At2g28480 [Arabidopsis thaliana]
gi|110741747|dbj|BAE98819.1| hypothetical protein [Arabidopsis thaliana]
gi|330253035|gb|AEC08129.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 372
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 86/120 (71%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K K KEA LIE L ++E+ K P +T EER YLK+ +K+ NYV +GRRG+FGG
Sbjct: 134 KAKIKEALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGG 193
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKHETVKV+ +P ++ +YAE LA+LS G+ ++I +TIIFYRGK YV
Sbjct: 194 VILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYV 253
>gi|115459160|ref|NP_001053180.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|21740788|emb|CAD41533.1| OSJNBb0091E11.2 [Oryza sativa Japonica Group]
gi|38346227|emb|CAE02049.2| OJ990528_30.7 [Oryza sativa Japonica Group]
gi|90265163|emb|CAH67731.1| H0522A01.2 [Oryza sativa Indica Group]
gi|113564751|dbj|BAF15094.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|116310744|emb|CAH67539.1| H0425E08.7 [Oryza sativa Indica Group]
gi|125548841|gb|EAY94663.1| hypothetical protein OsI_16441 [Oryza sativa Indica Group]
Length = 479
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 83/119 (69%), Gaps = 2/119 (1%)
Query: 4 KRKEAWLIENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
+ KE L+ LTK E P P+E +DPE+LT EE Y + +K KNYV VGRRGI+ GV
Sbjct: 151 RNKEERLVAALTKIE-PDDPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGV 209
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
+LNMHLHWKKH+T++V+ K P ++ E A LA+LS GIV+DI NTII YRGKNY
Sbjct: 210 ILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLSGGIVLDIQEGNTIIMYRGKNYA 268
>gi|297831446|ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329445|gb|EFH59864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1055
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/120 (53%), Positives = 85/120 (70%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K ++KE L+E + K E ++ +DPEILT EE Y + K KNYV VGRRGI+ G
Sbjct: 761 KARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQG 820
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKH+T++VV K P +++E A LA+L+ GIV+D++ NTII YRGKNYV
Sbjct: 821 VILNMHLHWKKHQTLQVVIKTFTPDEVNEIAVELARLTGGIVLDVHEGNTIIMYRGKNYV 880
>gi|125590852|gb|EAZ31202.1| hypothetical protein OsJ_15301 [Oryza sativa Japonica Group]
Length = 484
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 83/119 (69%), Gaps = 2/119 (1%)
Query: 4 KRKEAWLIENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
+ KE L+ LTK E P P+E +DPE+LT EE Y + +K KNYV VGRRGI+ GV
Sbjct: 151 RNKEERLVAALTKIE-PDDPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGV 209
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
+LNMHLHWKKH+T++V+ K P ++ E A LA+LS GIV+DI NTII YRGKNY
Sbjct: 210 ILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLSGGIVLDIQEGNTIIMYRGKNYA 268
>gi|9279724|dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]
Length = 1115
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/120 (53%), Positives = 84/120 (70%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K ++KE L+E + K E ++ +DPEILT EE Y + K KNYV VGRRGI+ G
Sbjct: 818 KARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQG 877
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKH+T++VV K P ++ E A LA+L+ GIV+D++ NTII YRGKNYV
Sbjct: 878 VILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYV 937
>gi|297739537|emb|CBI29719.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 83/119 (69%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K +RKE L E LTK E ++ +DPEILT EE + + K KNYV +GRRGI+ G
Sbjct: 13 KARRKEERLAEALTKIEPKESSETTHDPEILTPEEHFFFLKMGLKCKNYVPIGRRGIYQG 72
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
V+LNMHLHWKKH+T++VV K P ++ E A LA+L+ GIV+DI+ NTII YRGKNY
Sbjct: 73 VILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIVLDIHEENTIIMYRGKNY 131
>gi|225448146|ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Vitis vinifera]
Length = 401
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 83/119 (69%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K +RKE L E LTK E ++ +DPEILT EE + + K KNYV +GRRGI+ G
Sbjct: 83 KARRKEERLAEALTKIEPKESSETTHDPEILTPEEHFFFLKMGLKCKNYVPIGRRGIYQG 142
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
V+LNMHLHWKKH+T++VV K P ++ E A LA+L+ GIV+DI+ NTII YRGKNY
Sbjct: 143 VILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIVLDIHEENTIIMYRGKNY 201
>gi|356498434|ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like, partial [Glycine max]
Length = 383
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 82/120 (68%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+K ++KE L E L K E ++ +DPEILT EE + + K KNYV VGRRGI+
Sbjct: 67 LKARKKEERLCEALKKIEPAESSETTHDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQ 126
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
GV+LNMHLHWKKH+T+KVV K ++ E A LA+LS GIV+DI+ NTII YRGKNY
Sbjct: 127 GVILNMHLHWKKHQTLKVVVKTFSAEEVKEIAAELARLSGGIVLDIHEDNTIIMYRGKNY 186
>gi|449458069|ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
gi|449516505|ref|XP_004165287.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 500
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 82/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K ++KE L+E L K E + +DPEILT EE Y + K KNYV VGRRGI+ G
Sbjct: 181 KARKKEKRLVEALEKIEPADSSDTTHDPEILTPEEHFYFLKMGIKGKNYVPVGRRGIYQG 240
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
V+LNMHLHWKKH+TVKVV K P ++ E A LA+L+ G+V+DI+ +TII YRGKNY
Sbjct: 241 VILNMHLHWKKHQTVKVVVKTFSPEEVKEIAAELARLTGGLVLDIHEEDTIIMYRGKNY 299
>gi|242073570|ref|XP_002446721.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
gi|241937904|gb|EES11049.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
Length = 484
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 84/119 (70%), Gaps = 2/119 (1%)
Query: 4 KRKEAWLIENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
++KE L+ L K E P+ P+E +DPE+LT EE Y + +K KNYV VGRRGI+ GV
Sbjct: 157 RKKEERLVAALKKIE-PEDPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGV 215
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
+LNMHLHWKKH+T++V+ K P ++ E A LA+LS GIV+DI NTII YRGKNY
Sbjct: 216 ILNMHLHWKKHQTLQVIVKTFTPEEVKEIATELARLSGGIVLDIQDGNTIIMYRGKNYA 274
>gi|356501797|ref|XP_003519710.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 382
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 82/120 (68%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+K ++KE L E L K E ++ +DPEILT EE + + K KNYV VGRRGI+
Sbjct: 87 LKARKKEERLCEALKKIEPAESSETTHDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQ 146
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
GV+LNMHLHWKKH+T+KVV K ++ E A LA+LS GIV+DI+ NTII YRGKNY
Sbjct: 147 GVILNMHLHWKKHQTLKVVVKTFSAEEVKEIATELARLSGGIVLDIHEDNTIIMYRGKNY 206
>gi|79417439|ref|NP_189171.2| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|75116513|sp|Q67XL4.1|Y3544_ARATH RecName: Full=Uncharacterized CRM domain-containing protein
At3g25440, chloroplastic; Flags: Precursor
gi|51971805|dbj|BAD44567.1| unknown protein [Arabidopsis thaliana]
gi|332643490|gb|AEE77011.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 444
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 84/120 (70%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K ++KE L+E + K E ++ +DPEILT EE Y + K KNYV VGRRGI+ G
Sbjct: 147 KARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQG 206
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKH+T++VV K P ++ E A LA+L+ GIV+D++ NTII YRGKNYV
Sbjct: 207 VILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYV 266
>gi|145332683|ref|NP_001078207.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|332643491|gb|AEE77012.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 380
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 84/120 (70%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K ++KE L+E + K E ++ +DPEILT EE Y + K KNYV VGRRGI+ G
Sbjct: 83 KARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQG 142
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
V+LNMHLHWKKH+T++VV K P ++ E A LA+L+ GIV+D++ NTII YRGKNYV
Sbjct: 143 VILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYV 202
>gi|238007578|gb|ACR34824.1| unknown [Zea mays]
gi|414586597|tpg|DAA37168.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 342
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 83/119 (69%), Gaps = 2/119 (1%)
Query: 4 KRKEAWLIENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
++KE L+ L K E P+ P+E +DPE+LT EE Y + +K KNYV VGRRGI+ GV
Sbjct: 15 RKKEERLVVALKKIE-PEDPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGV 73
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
+LNMHLHWKKH+T++V+ K P ++ E A LA LS GIV+DI NTII YRGKNY
Sbjct: 74 ILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLDIQDGNTIIMYRGKNYA 132
>gi|224132018|ref|XP_002321235.1| predicted protein [Populus trichocarpa]
gi|222862008|gb|EEE99550.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 84/120 (70%), Gaps = 2/120 (1%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEA-YDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
K +RKE ++ L K E PK +EA +DPEILT EE + + K KNYV VGRRGI+
Sbjct: 100 KAQRKEERFVQALKKIE-PKESSEATHDPEILTPEEHFFFLKMGLKCKNYVPVGRRGIYQ 158
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
GV+LNMHLHWKKH+T+KVV K P ++ E A LA+ + GIV+DI+ NTII YRGKNY
Sbjct: 159 GVILNMHLHWKKHQTLKVVVKTFTPEEVKEIAAELARFTGGIVLDIHEENTIIMYRGKNY 218
>gi|212723506|ref|NP_001132081.1| uncharacterized protein LOC100193495 [Zea mays]
gi|194693368|gb|ACF80768.1| unknown [Zea mays]
gi|414586598|tpg|DAA37169.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
gi|414586599|tpg|DAA37170.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 485
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 83/119 (69%), Gaps = 2/119 (1%)
Query: 4 KRKEAWLIENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
++KE L+ L K E P+ P+E +DPE+LT EE Y + +K KNYV VGRRGI+ GV
Sbjct: 158 RKKEERLVVALKKIE-PEDPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGV 216
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
+LNMHLHWKKH+T++V+ K P ++ E A LA LS GIV+DI NTII YRGKNY
Sbjct: 217 ILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLDIQDGNTIIMYRGKNYA 275
>gi|255572670|ref|XP_002527268.1| conserved hypothetical protein [Ricinus communis]
gi|223533361|gb|EEF35112.1| conserved hypothetical protein [Ricinus communis]
Length = 458
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 81/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K ++KE ++ L K E + +DPEILT EE + + K KNYV VGRRGI+ G
Sbjct: 141 KAQKKEERYVQALKKIEPVDSSETTHDPEILTPEEHFFFLKMGLKCKNYVPVGRRGIYQG 200
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
V+LNMHLHWKKH+TV+VV K P ++ E A LA+L+ GIV+DI+ NTII YRGKNY
Sbjct: 201 VILNMHLHWKKHQTVQVVVKTFSPEEVKEIAAELARLTGGIVLDIHEENTIIMYRGKNY 259
>gi|357167884|ref|XP_003581379.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 485
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 64/118 (54%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Query: 4 KRKEAWLIENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
++KE L+ L K E P P+E +DPE+LT EE Y + +K KNYV VGRRGI+ GV
Sbjct: 158 RKKEERLLAALKKIE-PNDPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGV 216
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+LNMHLHWKKH+T++V+ K P ++ E A LA LS GIV+ I NTII YRGKNY
Sbjct: 217 ILNMHLHWKKHQTLQVIVKTFTPEEVKEIASELAILSGGIVLSIQEGNTIIMYRGKNY 274
>gi|357439925|ref|XP_003590240.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479288|gb|AES60491.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 472
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 81/120 (67%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+K ++KE L E L K E ++ +DPEILT EE + + K KNYV VGRRGI+
Sbjct: 127 LKARKKEERLREALKKIEPTESSETIHDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQ 186
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
GV+LNMHLHWKKH+T++VV K ++ E A LA+L+ GIV+ I+ +TII YRGKNY
Sbjct: 187 GVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLGIHEEDTIIMYRGKNY 246
>gi|357439975|ref|XP_003590265.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479313|gb|AES60516.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 443
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 81/120 (67%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+K ++KE L E L K E ++ +DPEILT EE + + K KNYV VGRRGI+
Sbjct: 127 LKARKKEERLREALKKIEPTESSETIHDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQ 186
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
GV+LNMHLHWKKH+T++VV K ++ E A LA+L+ GIV+ I+ +TII YRGKNY
Sbjct: 187 GVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLGIHEEDTIIMYRGKNY 246
>gi|356560779|ref|XP_003548665.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized CRM
domain-containing protein At3g25440, chloroplastic-like
[Glycine max]
Length = 273
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K ++K+ L E L K E K+ +DPEIL EE + + K+KN V VGRRGI+ G
Sbjct: 27 KAQKKKKRLCEALKKIEPAKSSETTHDPEILXPEEHFFFLKMGLKRKNNVPVGRRGIYQG 86
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
V+L+MHLH KKH+T+KVV K ++ E A LA+LS GIV+DI+ NTII YRGKNY
Sbjct: 87 VILSMHLHXKKHQTLKVV-KTFSAAEVKEIAAELARLSGGIVLDIHEDNTIIMYRGKNY 144
>gi|168020023|ref|XP_001762543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686276|gb|EDQ72666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 548
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 64/119 (53%), Positives = 78/119 (65%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K K+K A E L KFELP P DPE+LT E+ + LK+ K KNYV VGRRGI+GG
Sbjct: 195 KCKKKIALHEEQLKKFELPPLPEPDPDPEVLTPEQLYALKKLGYKNKNYVPVGRRGIYGG 254
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ NMH+HWKKHETV++ KI E E L +LS GIVIDI+ TII +RG+NY
Sbjct: 255 TIQNMHMHWKKHETVRIDCDNFPKEKIKEMGETLERLSGGIVIDIHQGTTIIMWRGRNY 313
>gi|359488800|ref|XP_002272412.2| PREDICTED: uncharacterized protein LOC100254349 [Vitis vinifera]
Length = 666
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/119 (51%), Positives = 81/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP+ P +DPE+LT E+ K+ + KNYV VG RG+FGG
Sbjct: 104 RAKKKVALLLQKLKKYELPELPAPRHDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVFGG 163
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMHLHWK HETV+V KI E A +LA+LS GIVI+++ TII +RG+NY
Sbjct: 164 VVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINVHDVKTIIMFRGRNY 222
>gi|296087592|emb|CBI34848.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/119 (51%), Positives = 81/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP+ P +DPE+LT E+ K+ + KNYV VG RG+FGG
Sbjct: 119 RAKKKVALLLQKLKKYELPELPAPRHDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVFGG 178
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMHLHWK HETV+V KI E A +LA+LS GIVI+++ TII +RG+NY
Sbjct: 179 VVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINVHDVKTIIMFRGRNY 237
>gi|242086871|ref|XP_002439268.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
gi|241944553|gb|EES17698.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
Length = 652
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 80/119 (67%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP P +DPE+LT E+ K+ + +NYV VG RG+FGG
Sbjct: 104 RAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGG 163
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMH+HWK HETV+V KI E A +L +LS GIVI+I+ + TII +RG+NY
Sbjct: 164 VVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNY 222
>gi|356513969|ref|XP_003525680.1| PREDICTED: uncharacterized protein LOC100780131 [Glycine max]
Length = 653
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 61/119 (51%), Positives = 81/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP+ P +DPE+LT E+ K+ + KNYV VG RG+FGG
Sbjct: 121 RAKKKVALLLQKLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGG 180
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMHLHWK HETV+V KI E A +LA+LS GIVI+++ TII +RG+NY
Sbjct: 181 VVQNMHLHWKFHETVQVCCDNFPKEKIKEMASMLARLSGGIVINVHNVKTIIMFRGRNY 239
>gi|413950005|gb|AFW82654.1| hypothetical protein ZEAMMB73_283519 [Zea mays]
Length = 645
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 80/119 (67%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP P +DPE+LT E+ K+ + +NYV VG RG+FGG
Sbjct: 103 RAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGG 162
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMH+HWK HETV+V KI E A +L +LS GIVI+I+ + TII +RG+NY
Sbjct: 163 VVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNY 221
>gi|356573355|ref|XP_003554827.1| PREDICTED: uncharacterized protein LOC100782246 [Glycine max]
Length = 653
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/119 (51%), Positives = 81/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP+ P +DPE+LT E+ K+ + KNYV VG RG+FGG
Sbjct: 121 RAKKKVALLLQKLKKYELPELPHPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGG 180
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMHLHWK HETV+V KI E A +LA+LS GIVI+++ TII +RG+NY
Sbjct: 181 VVQNMHLHWKFHETVQVCCDNFPKEKIKEMASMLARLSGGIVINVHNVKTIIMFRGRNY 239
>gi|255560940|ref|XP_002521483.1| conserved hypothetical protein [Ricinus communis]
gi|223539382|gb|EEF40973.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 60/119 (50%), Positives = 80/119 (67%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP+ P +DPE+ T E+ K+ + +NYV VG RG+FGG
Sbjct: 122 RAKKKVALLLQKLKKYELPELPPPLHDPELFTSEQLQAYKKIGFRNRNYVPVGVRGVFGG 181
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMHLHWK HETV+V KI E A +LA+LS GIVI+I+ TII +RG+NY
Sbjct: 182 VVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINIHNVKTIIMFRGRNY 240
>gi|125550822|gb|EAY96531.1| hypothetical protein OsI_18436 [Oryza sativa Indica Group]
Length = 560
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 80/119 (67%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP P +DPE+LT E+ K+ + +NYV VG RG+FGG
Sbjct: 114 RAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGG 173
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMH+HWK HETV+V KI E A +L +LS GIVI+I+ + TII +RG+NY
Sbjct: 174 VVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNY 232
>gi|15232195|ref|NP_189392.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|11994182|dbj|BAB01285.1| unnamed protein product [Arabidopsis thaliana]
gi|332643815|gb|AEE77336.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 491
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/119 (48%), Positives = 81/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K++LP+ P+ +DPE+ T E+ K+ K KNYV VG RG+FGG
Sbjct: 62 RAKKKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGG 121
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMH+HWK HETV+V KI E A ++A+LS G+VI+I+ TII +RG+NY
Sbjct: 122 VVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNY 180
>gi|449450187|ref|XP_004142845.1| PREDICTED: uncharacterized protein LOC101215761 [Cucumis sativus]
Length = 619
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 60/119 (50%), Positives = 81/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP+ P +DPE+LT E+ K+ + +NYV VG RG+FGG
Sbjct: 119 RAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVFGG 178
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMHLHWK HETV+V KI E A +LA+LS GIV++I+ TII +RG+NY
Sbjct: 179 VVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVKTIIMFRGRNY 237
>gi|449483922|ref|XP_004156733.1| PREDICTED: uncharacterized protein LOC101226279 [Cucumis sativus]
Length = 619
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/119 (50%), Positives = 81/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP+ P +DPE+LT E+ K+ + +NYV VG RG+FGG
Sbjct: 119 RAKKKVALLLQQLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVFGG 178
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMHLHWK HETV+V KI E A +LA+LS GIV++I+ TII +RG+NY
Sbjct: 179 VVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVKTIIMFRGRNY 237
>gi|297818350|ref|XP_002877058.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
gi|297322896|gb|EFH53317.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
Length = 488
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 58/119 (48%), Positives = 81/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K++LP+ P+ +DPE+ T E+ K+ K KNYV VG RG+FGG
Sbjct: 62 RAKKKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGG 121
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMH+HWK HETV+V KI E A ++A+LS G+VI+I+ TII +RG+NY
Sbjct: 122 VVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNY 180
>gi|51038196|gb|AAT93999.1| unknow protein [Oryza sativa Japonica Group]
gi|222630175|gb|EEE62307.1| hypothetical protein OsJ_17096 [Oryza sativa Japonica Group]
Length = 560
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 80/119 (67%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP P +DPE+LT E+ K+ + +NYV VG RG+FGG
Sbjct: 114 RAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGG 173
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMH+HWK HETV+V KI E A +L +LS GIVI+I+ + TII +RG+NY
Sbjct: 174 VVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNY 232
>gi|357134703|ref|XP_003568955.1| PREDICTED: uncharacterized protein LOC100832553 [Brachypodium
distachyon]
Length = 562
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 58/119 (48%), Positives = 80/119 (67%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP P +DPE+LT E+ K+ + +NYV VG RG+FGG
Sbjct: 118 RAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGG 177
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMH+HWK HETV+V KI E A +L +LS GIV++I+ + TII +RG+NY
Sbjct: 178 VVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVVNIHNTKTIIMFRGRNY 236
>gi|413917671|gb|AFW57603.1| hypothetical protein ZEAMMB73_144408 [Zea mays]
Length = 520
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/119 (48%), Positives = 79/119 (66%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K+ELP +DPE+LT E+ K+ + +NYV VG RG+FGG
Sbjct: 106 RAKKKVALLLQKLKKYELPDLQAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGG 165
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMH+HWK HETV+V KI E A +L +LS GIVI+I+ + TII +RG+NY
Sbjct: 166 VVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNY 224
>gi|224055583|ref|XP_002298551.1| predicted protein [Populus trichocarpa]
gi|222845809|gb|EEE83356.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 82/119 (68%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ K+K A L++ L K++LP+ P+ +DPE+LT E+ K+ + KNYV VG RG+FGG
Sbjct: 51 RAKKKVALLLQKLKKYDLPELPSPLHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGG 110
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VV NMH+HWK HETV+V KI E A ++A+LS GIV++++ TII +RG+NY
Sbjct: 111 VVQNMHMHWKFHETVQVSCDNFPKEKIKEMATMIARLSGGIVVNVHNVKTIIMFRGRNY 169
>gi|302768979|ref|XP_002967909.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
gi|300164647|gb|EFJ31256.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
Length = 557
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
KEK +EA + + K P+ P+E D E +T+EER+ L+R K K ++ +GRRG++ G
Sbjct: 412 KEKAEEA--LSKVEKLMKPREPSE--DRETITEEERYTLQRVGLKMKAFLLLGRRGVYSG 467
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINP---SNTIIFYRGK 118
++ NMHLHWK E VKVV K + I + A+++ S GI+I I P ++YRGK
Sbjct: 468 IIENMHLHWKYRELVKVVYKGKDRMDIEDTAKMIECESGGILIGIYPVSKGQVFLYYRGK 527
Query: 119 NY 120
NY
Sbjct: 528 NY 529
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
+L D E L+ K ++V + GI VV +H W+ E VK+ + +
Sbjct: 32 VLPDAELRRLRTMIIHTKERIKVKKLGITRNVVQAIHQKWRTSEIVKLKCDQEVAMNMRK 91
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
E L + + G+VI ++ YRGK+Y
Sbjct: 92 VHEELEKRTGGLVI-WRAGTALVIYRGKDYA 121
>gi|116310121|emb|CAH67138.1| OSIGBa0130P02.2 [Oryza sativa Indica Group]
Length = 1048
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+ EK K LIE L E+ P+ A E++++EER+ L++ K K+++ +GRRG+F
Sbjct: 588 IAEKEKTEKLIEEL---EMSSEPSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFD 644
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYRG 117
G V NMHLHWK E VK++ K + A L S GI++ ++ ++ II YRG
Sbjct: 645 GTVENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRG 704
Query: 118 KNY 120
KNY
Sbjct: 705 KNY 707
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L +E L+ + +N ++VG+ G+ G+V +H W+ E VK+ +
Sbjct: 141 LPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRT 200
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
E+L + + G+VI +TII YRG +Y
Sbjct: 201 HEILERKTGGLVI-WRSGSTIILYRGTDY 228
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 29 PEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWK 87
P LTD E L+R + +GR G+ +M W++ E KV + + E
Sbjct: 412 PPRLTDREMTILRRLARPLPYHYALGRSSNLQGLAASMIKLWERCEVAKVAIKRGAENID 471
Query: 88 IHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
+E L L+ G ++ + + +I+FYRGK+++
Sbjct: 472 SDLISEKLKGLTGGTLLSRD-NESIVFYRGKDFL 504
>gi|21741981|emb|CAD41031.1| OSJNBa0060P14.12 [Oryza sativa Japonica Group]
gi|32492164|emb|CAE04823.1| OSJNBb0048E02.3 [Oryza sativa Japonica Group]
Length = 1012
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+ EK K LIE L E+ P+ A E++++EER+ L++ K K+++ +GRRG+F
Sbjct: 552 IAEKEKTEKLIEEL---EMSSEPSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFD 608
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYRG 117
G V NMHLHWK E VK++ K + A L S GI++ ++ ++ II YRG
Sbjct: 609 GTVENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRG 668
Query: 118 KNY 120
KNY
Sbjct: 669 KNY 671
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L +E L+ + +N ++VG+ G+ G+V +H W+ E VK+ +
Sbjct: 141 LPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRT 200
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
E+L + + G+VI +TII YRG +Y
Sbjct: 201 HEILERKTGGLVI-WRSGSTIILYRGTDY 228
>gi|125590660|gb|EAZ31010.1| hypothetical protein OsJ_15093 [Oryza sativa Japonica Group]
Length = 818
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+ EK K LIE L E+ P+ A E++++EER+ L++ K K+++ +GRRG+F
Sbjct: 358 IAEKEKTEKLIEEL---EMSSEPSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFD 414
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRG 117
G V NMHLHWK E VK++ K + A L S GI++ ++ ++ II YRG
Sbjct: 415 GTVENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRG 474
Query: 118 KNY 120
KNY
Sbjct: 475 KNY 477
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 32 LTDEERHYLKRT--DEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKI 88
L++ ER L++ KK+ + VGR + GV + H+KKH V + + I
Sbjct: 687 LSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPI 746
Query: 89 HEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
+ L + + +++ P N +I YRG
Sbjct: 747 QQLISELEEATGSVLVSREP-NKVILYRG 774
>gi|218194999|gb|EEC77426.1| hypothetical protein OsI_16218 [Oryza sativa Indica Group]
Length = 818
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+ EK K LIE L E+ P+ A E++++EER+ L++ K K+++ +GRRG+F
Sbjct: 358 IAEKEKTEKLIEEL---EMSSEPSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFD 414
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRG 117
G V NMHLHWK E VK++ K + A L S GI++ ++ ++ II YRG
Sbjct: 415 GTVENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRG 474
Query: 118 KNY 120
KNY
Sbjct: 475 KNY 477
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 32 LTDEERHYLKRT--DEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKI 88
L++ ER L++ KK+ + VGR + GV + H+KKH V + + I
Sbjct: 687 LSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPI 746
Query: 89 HEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
+ L + + +++ P N +I YRG
Sbjct: 747 QQLISELEEATGSVLVSREP-NKVILYRG 774
>gi|297602873|ref|NP_001053020.2| Os04g0464800 [Oryza sativa Japonica Group]
gi|255675534|dbj|BAF14934.2| Os04g0464800 [Oryza sativa Japonica Group]
Length = 1042
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+ EK K LIE L E+ P+ A E++++EER+ L++ K K+++ +GRRG+F
Sbjct: 552 IAEKEKTEKLIEEL---EMSSEPSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFD 608
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRG 117
G V NMHLHWK E VK++ K + A L S GI++ ++ ++ II YRG
Sbjct: 609 GTVENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRG 668
Query: 118 KNY 120
KNY
Sbjct: 669 KNY 671
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L +E L+ + +N ++VG+ G+ G+V +H W+ E VK+ +
Sbjct: 141 LPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRT 200
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
E+L + + G+VI +TII YRG +Y
Sbjct: 201 HEILERKTGGLVI-WRSGSTIILYRGTDY 228
Score = 34.3 bits (77), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 32 LTDEERHYLKRT--DEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKI 88
L++ ER L++ KK+ + VGR + GV + H+KKH V + + I
Sbjct: 881 LSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPI 940
Query: 89 HEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
+ L + + +++ P N +I YRG
Sbjct: 941 QQLISELEEATGSVLVSREP-NKVILYRG 968
>gi|255552728|ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
gi|223543418|gb|EEF44949.1| conserved hypothetical protein [Ricinus communis]
Length = 1009
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+++K K L+ + E+ + P D E +TDEER+ L++ K K ++ +GRRG+F
Sbjct: 550 LEKKAKAVKLLAEIENSEMSQQP--EIDKEGITDEERYMLRKVGLKMKPFLLIGRRGVFD 607
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRG 117
G + NMHLHWK E VK++ K +HE A+ L S GI++ ++ I+ YRG
Sbjct: 608 GTIENMHLHWKYRELVKIICKERSLNAVHEVAQSLEAESGGILVAVERVSKGYAIVVYRG 667
Query: 118 KNY 120
KNY
Sbjct: 668 KNY 670
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L++EE L+R +K ++VG+ GI G+V +H W++ E VK+V + +
Sbjct: 158 LSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRT 217
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
++L + + G+V+ + I+ YRG NY+
Sbjct: 218 HDLLERKTGGLVV-WRAGSKIVLYRGVNYI 246
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 32 LTDEERHYLKRTDEKKKN--YVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKI 88
L++ +R L++ K KN + VGR I GV + H+KK+ V V + +
Sbjct: 861 LSNRDRLMLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFKKYPLAIVNVKGRAKGTSV 920
Query: 89 HEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
E L Q + G+++ PS +I YRG
Sbjct: 921 QEVVFQLEQATGGVLVSQEPSK-VILYRG 948
>gi|296087726|emb|CBI34982.3| unnamed protein product [Vitis vinifera]
Length = 1028
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K++R E L E L + ++P+ P D E +T+EER+ L++ + K ++ +GRRGIF G
Sbjct: 579 KKERAEKLLAE-LEEAQIPQQP--EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDG 635
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRGK 118
V NMHLHWK E VK++S IH A L S GI++ ++ II YRGK
Sbjct: 636 TVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGK 695
Query: 119 NY 120
NY
Sbjct: 696 NY 697
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 3 EKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
E RKE + L + E +APT A L +EE LK + + ++VG+ GI G+
Sbjct: 159 ELRKEVKREKKLVRKEDERAPTLAE--LTLPEEELRRLKGIGIQIRKKLKVGKAGITEGI 216
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
V +H W++ E VK+ + + ++L + + G+VI + II YRG NY
Sbjct: 217 VNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVI-WRSGSYIILYRGANY 273
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKIHE 90
LT++E L+R + +GR G+ +M W+K E K+ V + +
Sbjct: 405 LTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEM 464
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
AE L L+ G ++ + I+FYRGK+++
Sbjct: 465 MAEELKNLTGGTLLSRD-REFIVFYRGKDFL 494
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 32 LTDEERHYLKRTD--EKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKI 88
L++ ER L++ KK+ + VGR I GV + H++KH V V + +
Sbjct: 899 LSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSV 958
Query: 89 HEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
E L Q + +++ PS +I YRG
Sbjct: 959 QEVIFKLEQATGAVLVSQEPSK-VILYRG 986
>gi|225452572|ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1044
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K++R E L E L + ++P+ P D E +T+EER+ L++ + K ++ +GRRGIF G
Sbjct: 579 KKERAEKLLAE-LEEAQIPQQPE--IDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDG 635
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRGK 118
V NMHLHWK E VK++S IH A L S GI++ ++ II YRGK
Sbjct: 636 TVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGK 695
Query: 119 NY 120
NY
Sbjct: 696 NY 697
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 3 EKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
E RKE + L + E +APT A L +EE LK + + ++VG+ GI G+
Sbjct: 159 ELRKEVKREKKLVRKEDERAPTLAE--LTLPEEELRRLKGIGIQIRKKLKVGKAGITEGI 216
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
V +H W++ E VK+ + + ++L + + G+VI + II YRG NY
Sbjct: 217 VNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVI-WRSGSYIILYRGANY 273
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKIHE 90
LT++E L+R + +GR G+ +M W+K E K+ V + +
Sbjct: 405 LTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEM 464
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
AE L L+ G ++ + I+FYRGK+++
Sbjct: 465 MAEELKNLTGGTLLSRD-REFIVFYRGKDFL 494
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 32 LTDEERHYLKRTD--EKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKI 88
L++ ER L++ KK+ + VGR I GV + H++KH V V + +
Sbjct: 899 LSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSV 958
Query: 89 HEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
E L Q + +++ PS +I YRG
Sbjct: 959 QEVIFKLEQATGAVLVSQEPSK-VILYRG 986
>gi|302761182|ref|XP_002964013.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
gi|300167742|gb|EFJ34346.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
Length = 555
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 8/123 (6%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQV-GRRGIFG 60
KEK +EA + + K P+ P+E D E +T+EER+ L+R K K ++ + GRRG++
Sbjct: 409 KEKAEEA--LSKVEKLMKPREPSE--DRETITEEERYTLQRVGLKMKAFLLLAGRRGVYS 464
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINP---SNTIIFYRG 117
G++ NMHLHWK E VKVV K + I + A+++ S GI+I I P ++YRG
Sbjct: 465 GIIENMHLHWKYRELVKVVYKGKDRMDIEDTAKMIECESGGILIGIYPVSKGQVFLYYRG 524
Query: 118 KNY 120
KNY
Sbjct: 525 KNY 527
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
+L D E L+ K ++V + GI VV +H W+ E VK+ + +
Sbjct: 33 VLPDAELRRLRTMIIHTKERIKVKKLGITRNVVQAIHQKWRTSEIVKLKCDQEVAMNMRK 92
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
E L + + G+VI ++ YRGK+Y
Sbjct: 93 VHEELEKRTGGLVI-WRAGAALVIYRGKDYA 122
>gi|147852955|emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
Length = 1399
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K++R E L E L + ++P+ P D E +T+EER+ L++ + K ++ +GRRGIF G
Sbjct: 954 KKERAEKLLAE-LEEAQIPQQPE--IDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDG 1010
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRGK 118
V NMHLHWK E VK++S IH A L S GI++ ++ II YRGK
Sbjct: 1011 TVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGK 1070
Query: 119 NY 120
NY
Sbjct: 1071 NY 1072
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 3 EKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
E RKE + L + E +APT A L +EE LK + + ++VG+ GI G+
Sbjct: 351 ELRKEVKREKKLVRKEDERAPTLAE--LTLPEEELRRLKGIGIQIRKKLKVGKAGITEGI 408
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
V +H W++ E VK+ + + ++L + + G+VI + II YRG NY
Sbjct: 409 VNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVI-WRSGSYIILYRGANY 465
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 32 LTDEERHYLKRTD--EKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKI 88
L++ ER L++ KK+ + VGR I GV + H++KH V V + +
Sbjct: 1254 LSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSV 1313
Query: 89 HEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
E L Q + +++ PS +I YRG
Sbjct: 1314 QEVVFKLEQATGAVLVSQEPSK-VILYRG 1341
>gi|357496109|ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355493358|gb|AES74561.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 1096
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+++K K L+E+L K E E D E +T+EER+ L+R K K ++ +GRRG+F
Sbjct: 528 LEKKEKAEKLLESLEKDE--SLQEEEIDKESITEEERYMLRRIGLKMKPFLLLGRRGVFD 585
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRG 117
G V NMHLHWK E VK++ H+ A L S GI++ +N II YRG
Sbjct: 586 GTVENMHLHWKYRELVKIICNQESVEYAHQTARTLEAESGGILVAVERVNKGYAIIVYRG 645
Query: 118 KNY 120
KNY
Sbjct: 646 KNY 648
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
LTD E L+ + K ++VG+ G+ G+V +H W++ E V+VV + +
Sbjct: 151 LTDGEILRLRELGYQMKQKIKVGKAGVTEGIVNGIHERWRRSEVVRVVCEDLCRINMKRT 210
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
++L + + G+V+ + II YRG +Y
Sbjct: 211 HDILERKTGGLVV-WRSGSKIILYRGIDY 238
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKIHE 90
LTD+E LKR + +GR GV + W++ E V + V + + +
Sbjct: 369 LTDDEMTTLKRLGRTLPCHFALGRNWKLQGVAAAIIKFWERCEIVNIAVKRGVQNTSNRK 428
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
AE + L+ G ++ N I+ YRGK+++
Sbjct: 429 MAEEIKYLTGGTLLSRN-KEVIVIYRGKDFL 458
>gi|357500379|ref|XP_003620478.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355495493|gb|AES76696.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 820
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 10 LIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLH 69
L+ + +P P YD E +TDEER ++ + K Y+Q+G RG+F GV+ NMHLH
Sbjct: 601 LLAKIESSMVPVGPD--YDQETITDEERVVFRQIGLRMKAYLQLGIRGVFDGVIENMHLH 658
Query: 70 WKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
WK E VK+V+K + + A +L S GI++ I + II+YRGKNY
Sbjct: 659 WKHRELVKLVTKQKNRAFVEDTARLLEYESGGILVAIEKVSKEFAIIYYRGKNY 712
>gi|15229636|ref|NP_188468.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|11994102|dbj|BAB01105.1| unnamed protein product [Arabidopsis thaliana]
gi|17380904|gb|AAL36264.1| unknown protein [Arabidopsis thaliana]
gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 848
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 10 LIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLH 69
L+ + +P P YD E++++EER ++ K K Y+ +G RG+F GV+ NMHLH
Sbjct: 633 LLSKIEASMIPNGPD--YDQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLH 690
Query: 70 WKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
WK E VK++SK + E A +L S G+++ I P +I+YRGKNY
Sbjct: 691 WKHRELVKLISKQKNQAFVEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNY 744
>gi|222632479|gb|EEE64611.1| hypothetical protein OsJ_19463 [Oryza sativa Japonica Group]
Length = 601
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++TDEER +R + K Y+ VG RG+F GV+ NMHLHWK E VK+++K
Sbjct: 397 DKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPF 456
Query: 88 IHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
+ E A +L S GI++ I +IFYRGKNY
Sbjct: 457 VEETARLLEYESGGILVAIERVTKGYALIFYRGKNY 492
>gi|168038664|ref|XP_001771820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676951|gb|EDQ63428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1106
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 4 KRKEAWLIENLTKFELPKAPTEA-YDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
++KE + E L K + PT+A D E L++ ER+ ++ K K Y+ +GRRG+FGG
Sbjct: 725 QKKERAMAE-LAKIDAKTNPTDAPLDKEFLSEAERYMYRQQGLKHKGYLLLGRRGVFGGT 783
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKN 119
V NMHLHWK E VK++ K + + A++L + S GI++DI + II YRGKN
Sbjct: 784 VENMHLHWKHRELVKILVK-APIAEAQQTAKMLERESGGILVDIVNTSKGQAIIVYRGKN 842
Query: 120 Y 120
Y
Sbjct: 843 Y 843
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L + E L+ + + +++GR G+ G+V +H W+ E KV + +
Sbjct: 325 LPEPELRRLRTLGLQLQGRLKIGRLGVTPGIVEAIHDRWRTSELAKVKCDAPLSMNMKKA 384
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
E L +L+ G+VI + + YRGK+YV
Sbjct: 385 HEDLERLTGGLVI-WRAGSAAVVYRGKDYV 413
>gi|255582755|ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
gi|223528164|gb|EEF30228.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 19 LPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV 78
LP P YD E +TDEER +R + K Y+ +G RG+F GV+ NMHLHWK E VK+
Sbjct: 609 LPSGPD--YDQETITDEERAVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKL 666
Query: 79 VSKPCEPWKIHEYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
+SK + A +L S GI++ I P +I+YRGKNY
Sbjct: 667 ISKQKTLAFAEDTARLLEYESGGILVAIERVPKGFALIYYRGKNY 711
>gi|357128578|ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++TDEER +R K K Y+ VG RG+F GV+ NMHLHWK E VK+++K
Sbjct: 589 DREMITDEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAF 648
Query: 88 IHEYAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
++E A +L S GI++ + +IFYRGKNY
Sbjct: 649 VNETARLLEYESGGILVAVERVPKGYALIFYRGKNY 684
>gi|47900539|gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 798
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++TDEER +R + K Y+ VG RG+F GV+ NMHLHWK E VK+++K
Sbjct: 594 DKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPF 653
Query: 88 IHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
+ E A +L S GI++ I +IFYRGKNY
Sbjct: 654 VEETARLLEYESGGILVAIERVTKGYALIFYRGKNY 689
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
+ DEE L+R ++ + V + G+ V +H W+K E V++ +
Sbjct: 185 IEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTA 244
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
E++ + + G++I + ++ YRG NY
Sbjct: 245 HELVERRTGGLII-WRSGSVMVVYRGSNY 272
>gi|326521980|dbj|BAK04118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++T EER +R K K Y+ VG RG+F GV+ NMHLHWK E VK+++K
Sbjct: 43 DREMITAEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAF 102
Query: 88 IHEYAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
+ E A +L S GI++ I + +IFYRGKNY
Sbjct: 103 VEETARLLEYESGGILVAIERVPKGHALIFYRGKNY 138
>gi|125553229|gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
Length = 801
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++TDEER +R + K Y+ VG RG+F GV+ NMHLHWK E VK+++K
Sbjct: 597 DKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPF 656
Query: 88 IHEYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
+ E A +L S GI++ I P +IFYRGKNY
Sbjct: 657 VEETARLLEYESGGILVAIERVPKGYALIFYRGKNY 692
>gi|357167767|ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 1053
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 3 EKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGV 62
EK K L+E L K P++A E ++DEER+ L++ + K ++ +GRRG+F G
Sbjct: 610 EKEKAEKLLEELEK---ASQPSKAETREHISDEERYMLRKIGLQMKPFLLLGRRGVFDGT 666
Query: 63 VLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYRGKN 119
+ NMHLHWK E VK++ K + A L S GI++ ++ + II YRGKN
Sbjct: 667 IENMHLHWKYRELVKIICKEHSMKDVEYAARTLESQSGGILVAVERVSKGHAIIMYRGKN 726
Query: 120 Y 120
Y
Sbjct: 727 Y 727
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 22 APTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSK 81
+P A + + DE R L+ + + ++VG+ G+ G+V +H W+ E VK+
Sbjct: 131 SPPSAAELTLPRDELRR-LQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNVELVKIRCD 189
Query: 82 PCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ E+L + + G+VI +TII YRG NY
Sbjct: 190 DVSAMNMRRTHEILERKTGGLVI-WRSGSTIILYRGTNY 227
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 29 PEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKI 88
P LTD E L+R + +GR G+ ++M W++ E K+ K
Sbjct: 439 PSKLTDREMTILRRLARPLPYHYALGRSSNLQGLAVSMIKLWERCEVAKIAIKRGAYCID 498
Query: 89 HEY-AEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
E +E L L+ G ++ + + +I+FYRGK+++
Sbjct: 499 SELVSEELKGLTGGTLLSRD-NKSIVFYRGKDFL 531
>gi|297734212|emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 10 LIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLH 69
L+ + +P P++ D E +TDEER +R + K Y+ +G RG+F GV+ NMHLH
Sbjct: 604 LLAKIEASMIPAGPSD--DQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLH 661
Query: 70 WKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
WK E VK++SK + + A +L S GI++ I P +I+YRGKNY
Sbjct: 662 WKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKNY 715
>gi|147815878|emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
Length = 850
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 10 LIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLH 69
L+ + +P P++ D E +TDEER +R + K Y+ +G RG+F GV+ NMHLH
Sbjct: 604 LLAKIEASMIPAGPSD--DQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLH 661
Query: 70 WKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
WK E VK++SK + + A +L S GI++ I P +I+YRGKNY
Sbjct: 662 WKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKNY 715
>gi|356573408|ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1027
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
++EK K L+ L E P+ E + E +T+EE++ L+R K ++ +GRRG+F
Sbjct: 514 LEEKAKAEKLLSELENAESPQ--EEEINKEGITEEEKYMLRRIGLKMSPFLLLGRRGVFD 571
Query: 61 GVVLNMHLHWKKHETVKVV-SKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYR 116
G V NMHLHWK E VK++ +K + + A+ L S GI+I +N S II YR
Sbjct: 572 GTVENMHLHWKYRELVKIICNKQMSLEDVQQIAQTLEAESGGILIAVERVNKSYAIIVYR 631
Query: 117 GKNY 120
GKNY
Sbjct: 632 GKNY 635
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L+D E L + ++VG+ G+ G+V +H W+ E V++V + + +
Sbjct: 130 LSDAEIRRLTTAGLAMRQKLRVGKAGLTEGIVNGIHERWRSFEVVRIVCEDLSRFNMKRT 189
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
++L + + G+V+ + II YRG +Y
Sbjct: 190 HDLLERKTGGLVV-WRSGSKIILYRGTDY 217
>gi|413946391|gb|AFW79040.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 266
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
++TDEE+ +R + K Y+ +G RG+F GV+ NMHLHWK E VK++SK + E
Sbjct: 1 MITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEE 60
Query: 91 YAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
A +LA S GI++ I +IFYRGKNY
Sbjct: 61 TARLLAYESGGILVAIERVPKGYALIFYRGKNY 93
>gi|356527819|ref|XP_003532504.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 719
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 19 LPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV 78
LP P YD E +TDEER + + K Y+ +G RG+F GV+ NMHLHWK E VK+
Sbjct: 511 LPVGPD--YDKETITDEERVMFRSVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKL 568
Query: 79 VSKPCEPWKIHEYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
++K + + A +L S GI++ I+ P ++I+YRGKNY
Sbjct: 569 ITKQKTLAFVEDTARLLEYESGGILVAIDKVPKGFSLIYYRGKNY 613
>gi|297830494|ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
Length = 846
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 10 LIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLH 69
L+ + +P P YD E++++EER ++ K K Y+ +G RG+F GV+ NMHLH
Sbjct: 633 LLSKIEASMIPNGPD--YDQEVISEEERAMFRKVGLKMKAYLPLGIRGVFDGVIENMHLH 690
Query: 70 WKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
WK E VK++SK + + A +L S G+++ I P +I+YRGKNY
Sbjct: 691 WKHRELVKLISKQKNLAFVEDTARLLEYESGGVLVAIEKVPKGFALIYYRGKNY 744
>gi|168024308|ref|XP_001764678.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683972|gb|EDQ70377.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 625
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 14 LTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E P D E L+D ER+ ++ K K ++ +GRRG+F G V NMHLHWK
Sbjct: 423 LNKVEAKTTPANVTLDKEHLSDGERYMYRKLGLKMKAFLLLGRRGVFSGTVENMHLHWKY 482
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
E VK++ K P + A++L S GI++DI + I+ YRGKNY
Sbjct: 483 RELVKILVKTSLP-EAERIAKILENESGGILVDIITTSKGQAIVMYRGKNY 532
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 48 KNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDIN 107
+ +++GR G+ G+V +H W+ E KV + + E L +L+ G+VI +
Sbjct: 49 QGRLKIGRLGVTPGIVEAIHERWRTCEIAKVKCDAPLSMNMKKAHEDLERLTGGLVIWRS 108
Query: 108 PSNTIIFYRGKNYV 121
S ++ YRGK+YV
Sbjct: 109 GSAAVV-YRGKDYV 121
>gi|255551945|ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
gi|223543652|gb|EEF45180.1| conserved hypothetical protein [Ricinus communis]
Length = 773
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L+K E+ P E DPE +TDEER ++ + K ++ +GRRG+F G V NMHLHWK
Sbjct: 507 LSKVEVFLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 566
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K ++ + A L S GI++ ++ + II +RGK+Y
Sbjct: 567 RELVKIILKAKNIEQVKKIALALEAESGGILVSVDRVSKGYAIIVFRGKDY 617
>gi|224059986|ref|XP_002300024.1| predicted protein [Populus trichocarpa]
gi|222847282|gb|EEE84829.1| predicted protein [Populus trichocarpa]
Length = 1012
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+++K K L+ L K E+ + P + D E +T+EER+ L++ K K ++ +G RG+F
Sbjct: 554 LEKKAKAEKLLSELEKSEMSQQPEK--DKEGITEEERYMLRKIGLKMKPFLLMGERGVFD 611
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYRG 117
G + NMHLHWK E VK++ K + A L S GI++ ++ II YRG
Sbjct: 612 GTIENMHLHWKYRELVKIICKEKSFQAVQAVARTLEAESGGILVAVEGVSKGYAIILYRG 671
Query: 118 KNYV 121
KNY
Sbjct: 672 KNYT 675
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L +EE L+ +K ++VG+ GI G+V +H W++ E VK+V + +
Sbjct: 162 LPNEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRT 221
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
++L + + G+V+ + I+ YRG +Y
Sbjct: 222 HDLLERKTGGLVV-WRVGSKIVLYRGADY 249
>gi|326507446|dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 775
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++T EER +R K K Y+ VG RG+F GV+ NMHLHWK E VK+++K
Sbjct: 586 DREMITAEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAF 645
Query: 88 IHEYAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
+ E A +L S GI++ I + +IFYRGKNY
Sbjct: 646 VEETARLLEYESGGILVAIERVPKGHALIFYRGKNY 681
>gi|413946392|gb|AFW79041.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 197
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
++TDEE+ +R + K Y+ +G RG+F GV+ NMHLHWK E VK++SK + E
Sbjct: 1 MITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEE 60
Query: 91 YAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
A +LA S GI++ I +IFYRGKNY
Sbjct: 61 TARLLAYESGGILVAIERVPKGYALIFYRGKNY 93
>gi|449440945|ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449477054|ref|XP_004154915.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 560
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E +TDEER +R + Y+ +G RG+F GVV NMHLHWK E VK++SK
Sbjct: 347 DQETITDEERVMFRRVGLRMTAYLPMGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAF 406
Query: 88 IHEYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
+ E A +L S GI++ I+ P +++YRGKNY
Sbjct: 407 VEETARLLEYESGGILVSIDRVPKGYALVYYRGKNY 442
>gi|413946390|gb|AFW79039.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 132
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
++TDEE+ +R + K Y+ +G RG+F GV+ NMHLHWK E VK++SK + E
Sbjct: 1 MITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEE 60
Query: 91 YAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
A +LA S GI++ I +IFYRGKNY
Sbjct: 61 TARLLAYESGGILVAIERVPKGYALIFYRGKNY 93
>gi|242044486|ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
gi|241923491|gb|EER96635.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
Length = 962
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K +R A + E L+ ELP D E +TDEER +R K + ++ +GRR +F G
Sbjct: 740 KAERALAKVQEFLSPAELPT------DLETVTDEERFLFRRIGLKMRAFLMLGRREVFDG 793
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGK 118
V NMHLHWK E VK++ + ++ A L S+G++I ++ ++ IIFYRGK
Sbjct: 794 TVQNMHLHWKHRELVKIIVRGKSFAQVKHIAISLEAESEGVLISLDKTSKGYAIIFYRGK 853
Query: 119 NY 120
NY
Sbjct: 854 NY 855
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
+ + E L+ T + K ++VG G+ +V ++H WK E VK+ + +
Sbjct: 353 IPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRT 412
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
++L + G+VI +++ YRG NY
Sbjct: 413 HDLLEDRTGGVVI-WRSGRSVVLYRGMNY 440
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE- 90
L D+E L+R + + +GR G+ M W+K K+ K P ++
Sbjct: 551 LRDKEMTTLRRLSRQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGVPNTCNDR 610
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
AE + +L+ G+++ N I+FYRG +++
Sbjct: 611 MAEEIKKLTGGVLLSRN-KEYIVFYRGNDFI 640
>gi|30686898|ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana]
gi|332643191|gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana]
Length = 881
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 13 NLTKFELPKAPTEAY-DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWK 71
L K E+ P E DPE +TDEER ++ K K ++ +GRRG+F G V NMHLHWK
Sbjct: 618 GLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWK 677
Query: 72 KHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K + + A L S GI++ I+ II YRG++Y
Sbjct: 678 YRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDY 729
>gi|357441009|ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355479830|gb|AES61033.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 838
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTEA-YDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E+ P+E DPE +TDEER ++ + K ++ +GRRG+F G + NMHLHWK
Sbjct: 611 LMKVEVSLKPSETRADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKY 670
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K + + A L S G+++ ++ + +I+ YRGK+Y
Sbjct: 671 RELVKIIVKANNFEHVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDY 721
>gi|115478793|ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|48716728|dbj|BAD23409.1| putative CRS1 [Oryza sativa Japonica Group]
gi|50726191|dbj|BAD33710.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113631223|dbj|BAF24904.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|125591023|gb|EAZ31373.1| hypothetical protein OsJ_15500 [Oryza sativa Japonica Group]
Length = 947
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 9/123 (7%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+K ++ A + E L+ ELP D E +TDEER L+R K K ++ +GRR +F
Sbjct: 726 IKAEKALAKVQEFLSPAELPT------DLETVTDEERFLLRRIGLKMKAFLMLGRREVFD 779
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRG 117
G V NMHLHWK E VKV+ K ++ A L S G++I ++ + II YRG
Sbjct: 780 GTVQNMHLHWKHRELVKVLVKGKSFPQVKHIAISLEAESGGVLISVDKTTKGYAIILYRG 839
Query: 118 KNY 120
KNY
Sbjct: 840 KNY 842
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 38 HYLKRTDE---KKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEV 94
H L+R + + K ++VG G+ +V ++H W+ E VK+ + + ++
Sbjct: 344 HELRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDI 403
Query: 95 LAQLSKGIVIDINPSNTIIFYRGKNY 120
L + + GIVI +++ YRG NY
Sbjct: 404 LEERTGGIVI-WRSGRSVVLYRGMNY 428
>gi|9294196|dbj|BAB02098.1| unnamed protein product [Arabidopsis thaliana]
Length = 850
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 13 NLTKFELPKAPTEAY-DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWK 71
L K E+ P E DPE +TDEER ++ K K ++ +GRRG+F G V NMHLHWK
Sbjct: 587 GLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWK 646
Query: 72 KHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K + + A L S GI++ I+ II YRG++Y
Sbjct: 647 YRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDY 698
>gi|356529577|ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 791
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 10 LIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLH 69
L+ + +P P YD E +TDEER ++ + K Y+ +G RG+F GVV NMHLH
Sbjct: 569 LLAKIEASMVPAGPD--YDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLH 626
Query: 70 WKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
WK E VK+++K + + A +L S GI++ I + +I+YRGKNY
Sbjct: 627 WKHRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNY 680
>gi|125549065|gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indica Group]
Length = 893
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 9/123 (7%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+K ++ A + E L+ ELP D E +TDEER L+R K K ++ +GRR +F
Sbjct: 671 IKAEKALAKVQEFLSPAELPT------DLETVTDEERFLLRRIGLKMKAFLMLGRREVFD 724
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRG 117
G V NMHLHWK E VKV+ K ++ A L S G++I ++ + II YRG
Sbjct: 725 GTVQNMHLHWKHRELVKVLVKGKSFPQVKHIAISLEAESGGVLISVDKTTKGYAIILYRG 784
Query: 118 KNY 120
KNY
Sbjct: 785 KNY 787
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 38 HYLKRTDE---KKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEV 94
H L+R + + K ++VG G+ +V ++H W+ E VK+ + + ++
Sbjct: 343 HELRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDI 402
Query: 95 LAQLSKGIVIDINPSNTIIFYRGKNY 120
L + + GIVI +++ YRG NY
Sbjct: 403 LEERTGGIVI-WRSGRSVVLYRGMNY 427
>gi|356522763|ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 734
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 10 LIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLH 69
L+ + +P P YD E +TDEER ++ + K Y+ +G RG+F GVV NMHLH
Sbjct: 569 LLAKIEASMVPAGPD--YDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLH 626
Query: 70 WKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
WK E VK+++K + + A +L S GI++ I + +I+YRGKNY
Sbjct: 627 WKHRELVKLMTKQKTVAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNY 680
>gi|242071513|ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
gi|241936876|gb|EES10021.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
Length = 895
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 14 LTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKH 73
L K E PTE PE +TDEER ++ + K ++ +GRRG+F G + NMHLHWK
Sbjct: 571 LGKVETALRPTEDSRPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYR 630
Query: 74 ETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K + A L S GI++ ++ + I+ +RGKNY
Sbjct: 631 ELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNY 680
>gi|414885161|tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
Length = 964
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K ++ A + E LT ELP D E +TDEER +R K + ++ +GRR +F G
Sbjct: 744 KAEKALAKVQEFLTPAELPT------DLETVTDEERFLFRRIGLKMRAFLMLGRREVFDG 797
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGK 118
V NMHLHWK E VK+V + + A L S+G++I ++ + IIFYRGK
Sbjct: 798 TVQNMHLHWKHRELVKIVVRGKSFAQAKHIAISLEAESEGVLISLDKTTKGYVIIFYRGK 857
Query: 119 NY 120
NY
Sbjct: 858 NY 859
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
+ + E L+ T + K ++VG G+ +V ++H WK E VK+ + +
Sbjct: 357 IPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRT 416
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
++L + G+VI +++ YRG NY
Sbjct: 417 HDLLEDRTGGVVI-WRSGRSVVLYRGMNY 444
>gi|242078893|ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
gi|241940565|gb|EES13710.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
Length = 728
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 12 ENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHW 70
+ L K +P+E + D E+LT+EE+ +R K V +GRRGIF GV+ +H HW
Sbjct: 556 QALAKLRSSWSPSEQSADRELLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHW 615
Query: 71 KKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
K E VKV++K + +I A +L + GI+I + S+ II YRGKNY
Sbjct: 616 KHKEVVKVITKQNQARQIMYTANLLEVETGGILIAVEKLTTSHAIILYRGKNY 668
>gi|224118814|ref|XP_002317913.1| predicted protein [Populus trichocarpa]
gi|222858586|gb|EEE96133.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTEA-YDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L+K E P+ +D E +++EER +R + K Y+ +G RG+F GV+ NMHLHWK
Sbjct: 592 LSKIETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKH 651
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
E VK++SK + + A++L S G+++ I P +I+YRGKNY
Sbjct: 652 RELVKLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKGFALIYYRGKNY 702
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 21 KAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVS 80
KAPT A + DEE L+R + + + + GI V+ N+H W+K E V++
Sbjct: 192 KAPTLAE--LTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIHDRWRKEELVRLKF 249
Query: 81 KPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ E++ + + G+VI + ++ +RG NY
Sbjct: 250 HEVLAHDMKTAHEIVERRTGGLVI-WRAGSVMVVFRGTNY 288
>gi|326497411|dbj|BAK05795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1070
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+ EK K L+E L K ++A E++++EER+ L++ + K ++ +GRRG+F
Sbjct: 622 LTEKEKAEKLLEELEK---ASRSSKAETREVISEEERYMLRKVGLQMKPFLLLGRRGVFD 678
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYRG 117
G + NMHLHWK E VK++ K + A L S GI++ ++ + II YRG
Sbjct: 679 GTIENMHLHWKYRELVKIICKEHSMEDVTYAARTLEAESGGILVAVERVSKGHAIIMYRG 738
Query: 118 KNY 120
KNY
Sbjct: 739 KNY 741
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L +E L+ + + ++VG+ G+ G+V +H W+ E VK+ +
Sbjct: 142 LPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNAELVKIRCDDISAMNMRRT 201
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
EVL + + G+VI +TII YRG NY
Sbjct: 202 HEVLERKTGGLVI-WRSGSTIILYRGTNY 229
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 20 PKAPTEAYDPEILTDEERHYLKRT--DEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVK 77
P+ P++A L++ ER L++ KK+ + +GR + GV + H+KKH
Sbjct: 931 PRLPSKAAP---LSNRERLVLRKQALQMKKRPVLAIGRNNVITGVAKTIRTHFKKHPLAV 987
Query: 78 V-VSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
V + + + + L + + +++ P N +I YRG
Sbjct: 988 VNIKNRADGTPVQQLISELEEATGSVLVSREP-NKVILYRG 1027
>gi|357158137|ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 962
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 12 ENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWK 71
E L+ ELP D E +TDEER +R K K ++ +GRR +F G V NMHLHWK
Sbjct: 752 EFLSPAELPT------DLETVTDEERFLFRRIGLKMKAFLMLGRREVFAGTVQNMHLHWK 805
Query: 72 KHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K ++ A L S G++I ++ + +II YRGKNY
Sbjct: 806 HRELVKIIVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYSIIVYRGKNY 857
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE- 90
L D+E L+R + + +GR G+ + W+K VK+ K P ++
Sbjct: 553 LRDKEMTALRRLARQTAPHFALGRNREHQGLASAIVKLWEKSTIVKIAIKRGVPNTCNDR 612
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
AE + +L+ G++I N IIFYRG +++
Sbjct: 613 MAEEIKKLTGGVLISRN-KEYIIFYRGNDFM 642
>gi|224111046|ref|XP_002315729.1| predicted protein [Populus trichocarpa]
gi|222864769|gb|EEF01900.1| predicted protein [Populus trichocarpa]
Length = 894
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 13 NLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWK 71
L K E P+E DPE +TDEER ++ + K ++ +GRRG+F G V NMHLHWK
Sbjct: 614 TLNKVEGFLKPSERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWK 673
Query: 72 KHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K ++ + A L S G+++ ++ + II YRGK+Y
Sbjct: 674 YRELVKIILKAKSFEQVKKIALALEAESGGVLVSVDKISKGYAIIVYRGKDY 725
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L + E L+ K+ +VG RG+ VV +H WK E +V + +
Sbjct: 212 LPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEGAPALNMKRM 271
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
E+L + G+VI T+ YRG +Y
Sbjct: 272 HEILENKTGGLVI-WRSGATVSLYRGVSY 299
>gi|154986387|gb|ABS89147.1| CFM2 alternative polyadenylation form 2 [Zea mays]
Length = 783
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 MKEKRKEAWLIENLTKFE-LPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIF 59
+ EK K LIE L K L KA E ++++ER+ L++ K K ++ +GRRG+F
Sbjct: 593 IAEKAKAEKLIEELEKASPLSKAEVR----ETISEDERYMLRKVGLKMKQFLLLGRRGVF 648
Query: 60 GGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYR 116
G + NMHLHWK E VK++ K + A L S GI++ ++ + II YR
Sbjct: 649 DGTIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYR 708
Query: 117 GKNY 120
GKNY
Sbjct: 709 GKNY 712
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 20 PKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVV 79
P AP A + + DE R L+ + + ++VG+ GI G+V +H W+ E VK+
Sbjct: 125 PSAPPSAAELALPRDELRR-LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLR 183
Query: 80 SKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ + E+L + + G+VI +TII YRG NY
Sbjct: 184 CEDVWAMNMRRTHEILERKTGGLVI-WRSGSTIILYRGTNY 223
>gi|297831030|ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
gi|297329237|gb|EFH59656.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
Length = 873
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 13 NLTKFELPKAPTEAY-DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWK 71
L K E P E DP+ +TDEER ++ K K ++ +GRRG+F G V NMHLHWK
Sbjct: 613 GLAKVEECLKPAEQREDPDSITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWK 672
Query: 72 KHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K + + A L S GI++ I+ II YRGK+Y
Sbjct: 673 YRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGKDY 724
>gi|413918579|gb|AFW58511.1| CFM2 [Zea mays]
Length = 1039
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 MKEKRKEAWLIENLTKFE-LPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIF 59
+ EK K LIE L K L KA E ++++ER+ L++ K K ++ +GRRG+F
Sbjct: 600 IAEKAKAEKLIEELEKASPLSKAEVR----ETISEDERYMLRKVGLKMKQFLLLGRRGVF 655
Query: 60 GGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYR 116
G + NMHLHWK E VK++ K + A L S GI++ ++ + II YR
Sbjct: 656 DGTIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYR 715
Query: 117 GKNY 120
GKNY
Sbjct: 716 GKNY 719
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 20 PKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVV 79
P AP A + + DE R L+ + + ++VG+ GI G+V +H W+ E VK+
Sbjct: 132 PSAPPSAAELALPRDELRR-LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLR 190
Query: 80 SKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ + E+L + + G+VI +TII YRG NY
Sbjct: 191 CEDVWAMNMRRTHEILERKTGGLVI-WRSGSTIILYRGTNY 230
>gi|356576487|ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 835
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E P+E DPE +TDEER ++ + K ++ +GRRG+F G + NMHLHWK
Sbjct: 611 LMKVESFLKPSEYKADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKY 670
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K ++ + A L S G+++ ++ + ++I YRGK+Y
Sbjct: 671 RELVKIIVKAKTFEQVKKIALALEAESGGVLVSVDKVSKGYSVIVYRGKDY 721
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 35 EERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEV 94
E + LK T EKK + ++GR G+ VV +H WK E V++ + + E+
Sbjct: 215 ELKRLLKLTFEKK-HKTRIGRSGVTQAVVDKIHERWKTSEIVRLKFEGEAALNMKRMHEI 273
Query: 95 LAQLSKGIVIDINPSNTIIFYRGKNY 120
L + + G+VI N++ YRG +Y
Sbjct: 274 LERKTGGLVI-WRSGNSVSLYRGVSY 298
>gi|154986383|gb|ABS89145.1| CFM2 [Zea mays]
Length = 942
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 MKEKRKEAWLIENLTKFE-LPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIF 59
+ EK K LIE L K L KA E ++++ER+ L++ K K ++ +GRRG+F
Sbjct: 503 IAEKAKAEKLIEELEKASPLSKAEVR----ETISEDERYMLRKVGLKMKQFLLLGRRGVF 558
Query: 60 GGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYR 116
G + NMHLHWK E VK++ K + A L S GI++ ++ + II YR
Sbjct: 559 DGTIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYR 618
Query: 117 GKNY 120
GKNY
Sbjct: 619 GKNY 622
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 20 PKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVV 79
P AP A + + DE R L+ + + ++VG+ GI G+V +H W+ E VK+
Sbjct: 35 PSAPPSAAELALPRDELRR-LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLR 93
Query: 80 SKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ + E+L + + G+VI +TII YRG NY
Sbjct: 94 CEDVWAMNMRRTHEILERKTGGLVI-WRSGSTIILYRGTNY 133
>gi|449515235|ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 1053
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Query: 5 RKEAWLIENLTKFELP-KAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVV 63
RK+A E L K E K D E +T EER+ LK+ + K ++ +GRRG+F G V
Sbjct: 573 RKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTV 632
Query: 64 LNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRGKNY 120
NMHLHWK E VK+++ +H+ A L S GI++ + S II +RGKNY
Sbjct: 633 ENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFRGKNY 692
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
LT+EE L+ + K + VG+ GI G+V +H W++ E VK+ + +
Sbjct: 184 LTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRT 243
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
++L + + GIV+ + II YRG NY+
Sbjct: 244 HDLLERKTGGIVV-WRSGSKIILYRGPNYI 272
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 32 LTDEERHYLKRTDEKKKNY--VQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKI 88
L+++ER L+R K K + VG+ + GV + H+KKH V V + +
Sbjct: 928 LSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSV 987
Query: 89 HEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
E L Q + +++ PS +I YRG
Sbjct: 988 QEIVFKLEQATGAVLVSQEPSK-VILYRG 1015
>gi|222616258|gb|EEE52390.1| hypothetical protein OsJ_34482 [Oryza sativa Japonica Group]
Length = 560
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 14 LTKFELPKAPTEAYDP-EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E PTE P E +TDEER ++ + K ++ +GRRG+F G + NMHLHWK
Sbjct: 419 LGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKY 478
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNYV 121
E VK++ K + + A L S GI++ ++ + I+ +RGK+Y
Sbjct: 479 RELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYA 530
>gi|147852748|emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 18 ELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVK 77
E K DPE +TDEER ++ + K ++ +GRRG+F G V NMHLHWK E VK
Sbjct: 631 EFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVK 690
Query: 78 VVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
++ K ++ + A L S G+++ ++ + I+ +RGK+Y
Sbjct: 691 IIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDY 736
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L + E L+ + KN ++G G+ VV + WK E VK+ + +
Sbjct: 220 LPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRI 279
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
E+L + + G+VI ++ YRG +Y
Sbjct: 280 HEILERKTGGLVI-WRSGTSVSLYRGVSY 307
>gi|449459492|ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 1032
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E +T EER+ LK+ + K ++ +GRRG+F G V NMHLHWK E VK+++
Sbjct: 576 DKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKT 635
Query: 88 IHEYAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
+H+ A L S GI++ + S II +RGKNY
Sbjct: 636 VHDVARTLEAESGGILVAVERVKRSFAIIIFRGKNY 671
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
LT+EE L+ + K + VG+ GI G+V +H +W++ E VK+ + +
Sbjct: 164 LTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRT 223
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
++L + + GIV+ + II YRG NY+
Sbjct: 224 HDLLERKTGGIVV-WRSGSKIILYRGPNYI 252
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 32 LTDEERHYLKRTDEKKKNY--VQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKI 88
L+++ER L+R K K + VG+ + GV + H+KKH V V + +
Sbjct: 907 LSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSV 966
Query: 89 HEYAEVLAQLSKGIVIDINPSNTIIFYRG 117
E L Q + +++ PS +I YRG
Sbjct: 967 QEIVFKLEQATGAVLVSQEPSK-VILYRG 994
>gi|225432918|ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product [Vitis vinifera]
Length = 902
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 18 ELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVK 77
E K DPE +TDEER ++ + K ++ +GRRG+F G V NMHLHWK E VK
Sbjct: 631 EFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVK 690
Query: 78 VVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
++ K ++ + A L S G+++ ++ + I+ +RGK+Y
Sbjct: 691 IIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDY 736
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L + E L+ + KN ++G G+ VV + WK E VK+ + +
Sbjct: 220 LPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRI 279
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
E+L + + G+VI ++ YRG +Y
Sbjct: 280 HEILERKTGGLVI-WRSGTSVSLYRGVSY 307
>gi|356567264|ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 712
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 1 MKEKRKEAWLI--------ENLTKFELPKAPTEA-YDPEILTDEERHYLKRTDEKKKNYV 51
+KE+++ A+++ L+K P+E D EI+TDEER ++ K ++ +
Sbjct: 517 LKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSL 576
Query: 52 QVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINP--- 108
+GRRGIF GV+ +H HWK E VKV++ ++ A+VL S GI++ ++
Sbjct: 577 LLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKE 636
Query: 109 SNTIIFYRGKNY 120
+ II YRGKNY
Sbjct: 637 GHAIIIYRGKNY 648
>gi|302805129|ref|XP_002984316.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
gi|300148165|gb|EFJ14826.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
Length = 692
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E +T+EER+ K+ + ++ +GRRG+F GV+ NMHLHWK E VK++ K +
Sbjct: 483 DRETITEEERYMFKKLGLRMDAFLLIGRRGVFDGVIENMHLHWKHRELVKLILKEKDKAI 542
Query: 88 IHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
E A++L S GI++ + + II YRGKNY
Sbjct: 543 ALEVAKMLEIESGGILVGVVTTSKGQAIIVYRGKNY 578
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 14 LTKFELPKAP--TEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWK 71
+T+ + PK P E PE+ E L+R + N ++VG G+ VV ++H W+
Sbjct: 64 VTRPQPPKLPCLAELTIPEL----ELRRLQRIAIRVVNPIKVGYLGVTKAVVQDIHRRWQ 119
Query: 72 KHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
K E VK+ + + + L + G+V+ I YRGK Y
Sbjct: 120 KCEVVKIQCDGPAAINMKQTHDELETKTGGLVV-WRTGGMAILYRGKGY 167
>gi|30678323|ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana]
gi|22531018|gb|AAM97013.1| unknown protein [Arabidopsis thaliana]
gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana]
gi|332640136|gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana]
Length = 1011
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 9/99 (9%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E +T++E++ L++ K K ++ +GRRG+F G + NMHLHWK E VK++ C +
Sbjct: 575 DKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKII---CNEYS 631
Query: 88 I---HEYAEVLAQLSKGIVID---INPSNTIIFYRGKNY 120
I H+ AE+L S GI++ ++ II YRGKNY
Sbjct: 632 IEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNY 670
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+++G+ GI G+V +H W+ E VK+ + + +VL + G+VI +
Sbjct: 185 LKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVI-WRSGS 243
Query: 111 TIIFYRGKNY 120
I+ YRG NY
Sbjct: 244 KILLYRGVNY 253
>gi|6692258|gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
Length = 1020
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 9/99 (9%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E +T++E++ L++ K K ++ +GRRG+F G + NMHLHWK E VK++ C +
Sbjct: 584 DKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKII---CNEYS 640
Query: 88 I---HEYAEVLAQLSKGIVID---INPSNTIIFYRGKNY 120
I H+ AE+L S GI++ ++ II YRGKNY
Sbjct: 641 IEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNY 679
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+++G+ GI G+V +H W+ E VK+ + + +VL + G+VI +
Sbjct: 185 LKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVI-WRSGS 243
Query: 111 TIIFYRGKNY 120
I+ YRG NY
Sbjct: 244 KILLYRGVNY 253
>gi|414591664|tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
Length = 1523
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E PTE + PE +TDEER ++ + K ++ +GRRG+F G + NMHLHWK
Sbjct: 1246 LGKVETALRPTEDSRPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKY 1305
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K + A L S GI++ ++ + I+ +RGKNY
Sbjct: 1306 RELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNY 1356
>gi|414870652|tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 715
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 12 ENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHW 70
+ L K +P+E + D E LT+EE+ +R K V +GRRGIF GV+ +H HW
Sbjct: 543 QALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHW 602
Query: 71 KKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
K E VKV++K + +I A +L + GI+I + S+ II YRGKNY
Sbjct: 603 KHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIILYRGKNY 655
>gi|162463484|ref|NP_001105008.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic precursor [Zea mays]
gi|75173308|sp|Q9FYT6.1|CRS1_MAIZE RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|9837550|gb|AAG00595.1|AF290414_1 CRS1 [Zea mays]
Length = 715
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 12 ENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHW 70
+ L K +P+E + D E LT+EE+ +R K V +GRRGIF GV+ +H HW
Sbjct: 543 QALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHW 602
Query: 71 KKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
K E VKV++K + +I A +L + GI+I + S+ II YRGKNY
Sbjct: 603 KHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIILYRGKNY 655
>gi|162459980|ref|NP_001106061.1| CRM family member 3 [Zea mays]
gi|156789080|gb|ABU96081.1| CRM family member 3 [Zea mays]
Length = 842
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E PTE + PE +TDEER ++ + K ++ +GRRG+F G + NMHLHWK
Sbjct: 565 LGKVETALRPTEDSRPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKY 624
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K + A L S GI++ ++ + I+ +RGKNY
Sbjct: 625 RELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFRGKNY 675
>gi|302766798|ref|XP_002966819.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
gi|300164810|gb|EFJ31418.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
Length = 672
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPW 86
+ E L++ E + R K +N+ VG+RGI+GGV+ N+H +WK HETV++ +
Sbjct: 121 ETEPLSEGEAAHYARIGNKNQNFASVGKRGIYGGVIHNIHTNWKFHETVRIKCPRHNSME 180
Query: 87 KIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ LA+LS GIV+D+ T+I +RGKNY
Sbjct: 181 ETRRIGAELARLSGGIVLDVLEDRTVIMFRGKNY 214
>gi|224091282|ref|XP_002309217.1| predicted protein [Populus trichocarpa]
gi|222855193|gb|EEE92740.1| predicted protein [Populus trichocarpa]
Length = 977
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
K ++ A + ENL ELP D E ++DEER ++ K Y+ +GRRG+F G
Sbjct: 756 KSEKDLAKVQENLEPTELPT------DLETISDEERFLFRKIGLSMKPYLFLGRRGVFDG 809
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGK 118
+ NMHLHWK E VK++ + ++ A L S G+++ ++ + II YRGK
Sbjct: 810 TIENMHLHWKYRELVKIIVERKGIAQVKHIAISLEAESGGVLVSVDRTTKGYAIIVYRGK 869
Query: 119 NYV 121
NY+
Sbjct: 870 NYM 872
>gi|326499694|dbj|BAJ86158.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 12 ENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHW 70
E L K P+E + D E+LT+EER ++ K +V +GRRGIF GV+ +H HW
Sbjct: 558 EALAKLHNSWNPSEQSADKELLTEEERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHW 617
Query: 71 KKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYRGKNY 120
K E VKV++K + ++I + +L + G++I + S+ II YRGKNY
Sbjct: 618 KHKEIVKVITKQNQAYQITYTSMLLEVETGGMLIATQKLTNSHAIILYRGKNY 670
>gi|326492786|dbj|BAJ90249.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 12 ENLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHW 70
E L K P+E + D E+LT+EER ++ K +V +GRRGIF GV+ +H HW
Sbjct: 558 EALAKLHNSWNPSEQSADKELLTEEERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHW 617
Query: 71 KKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYRGKNY 120
K E VKV++K + ++I + +L + G++I + S+ II YRGKNY
Sbjct: 618 KHKEIVKVITKQNQAYQITYTSMLLEVETGGMLIATQKLTNSHAIILYRGKNY 670
>gi|242076096|ref|XP_002447984.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
gi|241939167|gb|EES12312.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
Length = 800
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 MKEKRKEAWLIENLTKFE-LPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIF 59
+ EK + L+E L K L KA E ++++ER+ L++ K K ++ +GRRG+F
Sbjct: 605 IAEKERAEKLLEELEKASPLSKAEVR----ETISEDERYMLRKVGLKMKQFLLLGRRGVF 660
Query: 60 GGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVI---DINPSNTIIFYR 116
G + NMHLHWK E VK++ K + A L S GI++ ++ + II YR
Sbjct: 661 DGTIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYR 720
Query: 117 GKNY 120
GKNY
Sbjct: 721 GKNY 724
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
++VG+ GI G+V +H W+ E VK+ + + E+L + + G+VI +
Sbjct: 164 LKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILERKTGGLVI-WRSGS 222
Query: 111 TIIFYRGKNY 120
TII YRG NY
Sbjct: 223 TIILYRGTNY 232
>gi|77551737|gb|ABA94534.1| CRS1/YhbY domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 886
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTEAYDP-EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E PTE P E +TDEER ++ + K ++ +GRRG+F G + NMHLHWK
Sbjct: 573 LGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKY 632
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K + + A L S GI++ ++ + I+ +RGK+Y
Sbjct: 633 RELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDY 683
>gi|449529423|ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like, partial [Cucumis sativus]
Length = 789
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 14 LTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
+ K + K P++ D E +TDEER ++ K Y+ +GRRG++ G V NMHLHWK
Sbjct: 619 IAKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKF 678
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNT---IIFYRGKNYV 121
E VK++ + ++ A L S G+VI ++ + +I YRGKNY
Sbjct: 679 RELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYT 730
>gi|449452735|ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 846
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 14 LTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
+ K + K P++ D E +TDEER ++ K Y+ +GRRG++ G V NMHLHWK
Sbjct: 676 IAKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKF 735
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNT---IIFYRGKNYV 121
E VK++ + ++ A L S G+VI ++ + +I YRGKNY
Sbjct: 736 RELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYT 787
>gi|357145812|ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 730
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 25 EAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCE 84
++ D E+LT+EER ++ K +V +GRRG+F GV+ +H HWK E VKV++K +
Sbjct: 573 QSADKELLTEEERMIFRKIGLKMDEHVLLGRRGVFDGVIEEIHQHWKHKEIVKVITKQNQ 632
Query: 85 PWKIHEYAEVLAQLSKGIVIDINP---SNTIIFYRGKNY 120
++I + +L + G++I S+ II YRGKNY
Sbjct: 633 SYQITYTSMLLEVETGGVLIATQKLPHSHAIILYRGKNY 671
>gi|356573410|ref|XP_003554854.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1028
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 1 MKEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFG 60
+++K K L+E L E P+ + D E ++ EE++ L+R K ++ +GRRG+F
Sbjct: 534 LEKKAKAEKLLEKLINAESPQE--QEIDKEGISKEEKYMLRRIGLMMKPFLLLGRRGVFD 591
Query: 61 GVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRG 117
G V NMHLHWK E VK++ ++H+ A L S GI++ + II YRG
Sbjct: 592 GTVENMHLHWKYRELVKIICN-GSLEEVHQIALTLEAESGGILVAVERVRKGFAIIVYRG 650
Query: 118 KNY 120
KNY
Sbjct: 651 KNY 653
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 32 LTDEERHYLKRTDEK-KKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKIH 89
L+ +ER L++ K K+ + +G+ I GVV + H++KH V V + +
Sbjct: 866 LSTKERLLLRKQALKIKQPVLAIGKSNIVSGVVQTIKAHFEKHPLAVVNVKGRAKGTSVQ 925
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRG 117
E L Q + +++ PSN II YRG
Sbjct: 926 ELVFKLEQETGALLVSREPSN-IILYRG 952
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKIHE 90
LTD+E LKR + + +GR G+ + W++ E VK+ V + +
Sbjct: 369 LTDDEMTTLKRLGKPLPCHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTSSKI 428
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYRGKNYV 121
A+ L L+ GI++ + +FYRGK+Y+
Sbjct: 429 MAKELKHLTGGILLSRD-REFFVFYRGKDYL 458
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+E R+ L+ L + LP D EI R K V++ + GI
Sbjct: 131 EESRRRKELVPTLAELSLP-------DSEI-----RRLTTLGFSTTKKKVRLAKAGITEQ 178
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+V +H WK+ E V+V + + ++L + + G+V+ II YRG +Y
Sbjct: 179 IVDVIHERWKRSEVVRVFCEELSRDDMRRTHDLLERKTGGLVV-WRSGTKIILYRGADY 236
>gi|255551422|ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical protein [Ricinus communis]
Length = 742
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTEA-YDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L+K AP + D E++T+EER L++ K ++ + +GRRG+F GV+ +H HWK
Sbjct: 575 LSKLNSAWAPADQDADLEMMTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKH 634
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINP---SNTIIFYRGKNY 120
E VKV+S ++ A+ L + GI++ I+ + II YRGKNY
Sbjct: 635 REVVKVISLQRMFAQVIRTAKFLEAETGGILVSIDKLKEGHAIIIYRGKNY 685
>gi|297738658|emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 12 ENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWK 71
E+L ELP D E L+DEER ++ K ++ +G RGIF G V NMHLHWK
Sbjct: 666 EDLEPAELP------MDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWK 719
Query: 72 KHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K ++ A L S G+++ ++ + II YRGKNY
Sbjct: 720 YRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNY 771
>gi|359484307|ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 884
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 12 ENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWK 71
E+L ELP D E L+DEER ++ K ++ +G RGIF G V NMHLHWK
Sbjct: 669 EDLEPAELP------MDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWK 722
Query: 72 KHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K ++ A L S G+++ ++ + II YRGKNY
Sbjct: 723 YRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNY 774
>gi|326492672|dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E PTE PE +TDEER ++ + K ++ +GRRG+F G + NMHLHWK
Sbjct: 582 LGKVETALKPTEDTKPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKY 641
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K + A L S G+++ ++ + I+ +RGK+Y
Sbjct: 642 RELVKILVKAKSFADVKRTALSLEVESGGVLVSVDKVSKGYAIVVFRGKDY 692
>gi|115476078|ref|NP_001061635.1| Os08g0360100 [Oryza sativa Japonica Group]
gi|75132343|sp|Q6YYA3.1|CRS1_ORYSJ RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|38637564|dbj|BAD03815.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113623604|dbj|BAF23549.1| Os08g0360100 [Oryza sativa Japonica Group]
Length = 725
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E+LT+EER ++ K +V +GRRG+F GV+ +H HWK E VKV++K + +
Sbjct: 562 DRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQ 621
Query: 88 IHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
I + +L + G +I I S+ II YRGKNY
Sbjct: 622 ITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNY 657
>gi|218201029|gb|EEC83456.1| hypothetical protein OsI_28955 [Oryza sativa Indica Group]
Length = 514
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E+LT+EER ++ K +V +GRRG+F GV+ +H HWK E VKV++K + +
Sbjct: 351 DRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQ 410
Query: 88 IHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
I + +L + G +I I S+ II YRGKNY
Sbjct: 411 ITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNY 446
>gi|222640429|gb|EEE68561.1| hypothetical protein OsJ_27045 [Oryza sativa Japonica Group]
Length = 725
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E+LT+EER ++ K +V +GRRG+F GV+ +H HWK E VKV++K + +
Sbjct: 562 DRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQ 621
Query: 88 IHEYAEVLAQLSKGIVIDI---NPSNTIIFYRGKNY 120
I + +L + G +I I S+ II YRGKNY
Sbjct: 622 ITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNY 657
>gi|296087258|emb|CBI33632.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++T+EER ++ +K + + +GRRG+F GV+ +H HWK E VKV++ +
Sbjct: 332 DKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQ 391
Query: 88 IHEYAEVLAQLSKGIVIDINP---SNTIIFYRGKNY 120
+ A++L S G+++ I+ + II YRGKNY
Sbjct: 392 VLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNY 427
>gi|2244807|emb|CAB10230.1| hypothetical protein [Arabidopsis thaliana]
gi|7268157|emb|CAB78493.1| hypothetical protein [Arabidopsis thaliana]
Length = 918
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTEA-YDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E P E D E +T+EER ++ K K ++ +GRRG+F G V NMHLHWK
Sbjct: 657 LAKVEESLKPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKY 716
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E +K++ K + A L S GI++ ++ + +I YRGK+Y
Sbjct: 717 RELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDY 767
>gi|225452088|ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++T+EER ++ +K + + +GRRG+F GV+ +H HWK E VKV++ +
Sbjct: 631 DKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQ 690
Query: 88 IHEYAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
+ A++L S G+++ I+ + II YRGKNY
Sbjct: 691 VLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNY 726
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 46 KKKNYVQVGRRGIFGGVVLNMHLHWKKHE--TVKVVSKPCEPWKIHEYAEVLAQLSKGIV 103
K + +V+V + G+ VV +H+ WK E VK C + E+L ++G+V
Sbjct: 216 KMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCR--NMDRAREILEIKTRGLV 273
Query: 104 IDINPSNTIIFYRGKNY 120
I + +T++ YRG NY
Sbjct: 274 I-WSKKDTLVVYRGSNY 289
>gi|356564786|ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 794
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E LT+EER ++ K Y+ +GRR ++ G + NMHLHWK E VK++ K +
Sbjct: 613 DLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKLIVKGRNSAQ 672
Query: 88 IHEYAEVLAQLSKGIVIDINPS----NTIIFYRGKNY 120
+ + L S G+++ ++ +TII YRGKNY
Sbjct: 673 VKHISISLEAESGGVLVSVDKDTRGHHTIIVYRGKNY 709
>gi|186523322|ref|NP_197122.2| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|332004875|gb|AED92258.1| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
Length = 720
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 23 PTEAYDP-EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSK 81
P+E D EILT+EER L+R K + + +GRRG+F GV+ +H HWK E KV++
Sbjct: 562 PSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITM 621
Query: 82 PCEPWKIHEYAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
++ A+ L S G++I I + I+ YRGKNY
Sbjct: 622 QKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNY 663
>gi|9755828|emb|CAC01859.1| putative protein [Arabidopsis thaliana]
Length = 718
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 23 PTEAYDP-EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSK 81
P+E D EILT+EER L+R K + + +GRRG+F GV+ +H HWK E KV++
Sbjct: 560 PSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITM 619
Query: 82 PCEPWKIHEYAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
++ A+ L S G++I I + I+ YRGKNY
Sbjct: 620 QKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNY 661
>gi|357156286|ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 881
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTEAYDP-EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E P+E +P E +T+EER ++ + K ++ +GRRG+F G + NMHLHWK
Sbjct: 567 LGKVETALKPSEDTNPHETITEEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKY 626
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VK++ K ++ A L S GI++ ++ + I+ +RGK+Y
Sbjct: 627 RELVKILVKVKSFTEVKRIALSLEVESGGILVSVDKVSKGYAIVVFRGKDY 677
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 7 EAWLIENLTKFELPKAPTEA---------YDPEI-LTDEERHYLKRTDEKKKNYVQVGRR 56
E+ L++ +E P P EA + E+ L + E L+ + K+ +QVG
Sbjct: 135 ESSLVDARFPWERPMPPPEAAARATKSPVWMAELTLPEAELRRLRHATMRIKSRIQVGGA 194
Query: 57 GIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYR 116
G+ +V + WK E V+V + + E+L + + G+VI ++ YR
Sbjct: 195 GVTREIVAKIKEKWKTDEVVRVKVSGTPALNMRLFHEILERKTGGLVI-WRSGTSVSLYR 253
Query: 117 GKNY 120
G Y
Sbjct: 254 GVAY 257
>gi|255546121|ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical protein [Ricinus communis]
Length = 930
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E ++DEER ++ K Y+ +G+RG++ G + NMHLHWK E VKV+ + +
Sbjct: 738 DLETISDEERFLFRKIGLSMKPYLFLGKRGVYDGTIENMHLHWKYRELVKVIVRGKSFAQ 797
Query: 88 IHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNYV 121
+ A L S G+++ I + II YRGKNY+
Sbjct: 798 VKHIAISLEAESGGVLVSIERTTKGYAIIVYRGKNYL 834
>gi|449432614|ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 874
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAY--------DPEILTDEERHYLKRTDEKKKNYVQV 53
K +RK A+ L K E A EA+ +P+ +T+EER ++ + K ++ +
Sbjct: 619 KLERKLAFAERKLVKAERTLAKVEAFMTPAKRQAEPDSITEEERFMFRKLGLRMKAFLLL 678
Query: 54 GRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN--- 110
GRR +F G V NMHLHWK E VK++ K + A L S G+++ I+ +
Sbjct: 679 GRREVFDGTVENMHLHWKYRELVKIMIKANSFDHVKNIALQLEAESGGVLVSIDKVSKGY 738
Query: 111 TIIFYRGKNY 120
II YRGK+Y
Sbjct: 739 AIIVYRGKDY 748
>gi|167998334|ref|XP_001751873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696971|gb|EDQ83308.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 590
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 18/129 (13%)
Query: 5 RKEAWLIENLTKFE----LPKAPTEAYDPEILTDEERHYLKRTDEKKK-----NYVQVGR 55
RK+ ++ + L K + L AP E ++DEER+ + + + + GR
Sbjct: 119 RKKKYVEKELAKLDGQMKLADAPPAK---EQISDEERYMFMKLGLRMRARLLMGKLSSGR 175
Query: 56 RGIFGGVVLNMHLHWKKHETVKVVSK-PCEPWKIHEYAEVLAQLSKGIVIDI---NPSNT 111
RG+F GVV NMHLHWK E VKV+ K P ++ + A++L S G+++ I
Sbjct: 176 RGVFDGVVENMHLHWKHRELVKVIFKGPI--FEAEQTAKILEMESGGVLVGIVTTTKGQA 233
Query: 112 IIFYRGKNY 120
IIFYRGKNY
Sbjct: 234 IIFYRGKNY 242
>gi|357521157|ref|XP_003630867.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355524889|gb|AET05343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 676
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E +TDEER + + K Y+Q+ G+F V+ NMHLHW++ E VK+++K +
Sbjct: 523 ETITDEERVMFRVVGLRLKVYLQLDTLGVFDSVIENMHLHWRQRELVKLITKQKSLAFVE 582
Query: 90 EYAEVLAQLSKGIVIDIN--PSN-TIIFYRGKNY 120
E A +L S GI++ I+ P ++I+YRGK+Y
Sbjct: 583 ETASLLEYKSGGILVAIDRLPKGFSLIYYRGKDY 616
>gi|334186525|ref|NP_193187.3| CRM family member 3B [Arabidopsis thaliana]
gi|332658053|gb|AEE83453.1| CRM family member 3B [Arabidopsis thaliana]
Length = 907
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTEA-YDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E P E D E +T+EER ++ K K ++ +GRRG+F G V NMHLHWK
Sbjct: 646 LAKVEESLKPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKY 705
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRGKNY 120
E +K++ K + A L S GI++ I+ +I YRGK+Y
Sbjct: 706 RELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDY 756
>gi|224127512|ref|XP_002329296.1| predicted protein [Populus trichocarpa]
gi|222870750|gb|EEF07881.1| predicted protein [Populus trichocarpa]
Length = 687
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 22 APTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSK 81
+P +A D I+T+EER ++ K + + +GRRG+F GV+ +H HWK E VKV++
Sbjct: 519 SPRDA-DQGIMTEEERECFRKIGLKLRGSLVLGRRGVFEGVMEGLHQHWKHREVVKVITM 577
Query: 82 PCEPWKIHEYAEVLAQLSKGIVIDINP---SNTIIFYRGKNY 120
++ A +L S GI++ ++ + II YRGKNY
Sbjct: 578 QRVFSQVIHTATLLEAESDGILVSVDKLKEGHAIIIYRGKNY 619
>gi|449490080|ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 760
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++T+EER ++ K + + +GRRG+F GV+ +H HWK E VKV++ +
Sbjct: 609 DQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQ 668
Query: 88 IHEYAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
++ A++L S GI++ ++ II +RGKNY
Sbjct: 669 VNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNY 704
>gi|449441730|ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 760
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E++T+EER ++ K + + +GRRG+F GV+ +H HWK E VKV++ +
Sbjct: 609 DQELITNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQ 668
Query: 88 IHEYAEVLAQLSKGIVIDIN---PSNTIIFYRGKNY 120
++ A++L S GI++ ++ II +RGKNY
Sbjct: 669 VNYTAKLLEAESGGILVSVDKLKEGYAIIIFRGKNY 704
>gi|297800788|ref|XP_002868278.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
gi|297314114|gb|EFH44537.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
Length = 919
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 14 LTKFELPKAPTEA-YDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKK 72
L K E P E D E +T+EER ++ + K ++ +GRRG+F G V NMHLHWK
Sbjct: 651 LAKVEESLKPAEQRTDLEGITEEERFMFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 710
Query: 73 HETVKVVSKPCEPWKIHEYAEVLAQLSKGIVID---INPSNTIIFYRGKNY 120
E +K++ K + A L S GI++ I+ +I YRGK+Y
Sbjct: 711 RELIKILVKAKSLEGAKKVAMALEAESGGILVSVDKISKGYAVIVYRGKDY 761
>gi|5123569|emb|CAB45335.1| putative protein [Arabidopsis thaliana]
gi|7269874|emb|CAB79733.1| putative protein [Arabidopsis thaliana]
Length = 776
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ +R A + ++L ELP D EI+T+EER ++ ++ +GRR ++ G
Sbjct: 581 RAERDLAKVQKDLDPSELPT------DSEIITEEERLLYRKIGLSMDPFLLLGRREVYDG 634
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGK 118
+ NMHLHWK E VKV+ + ++ A L S G+++ ++ + II YRGK
Sbjct: 635 TIENMHLHWKHRELVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYAIILYRGK 694
Query: 119 NY 120
NY
Sbjct: 695 NY 696
>gi|334187011|ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|332660271|gb|AEE85671.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 841
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 13 NLTKFELPKAPTE-AYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWK 71
+L K + P+E D EI+T+EER ++ ++ +GRR ++ G + NMHLHWK
Sbjct: 627 DLAKVQKDLDPSELPTDSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWK 686
Query: 72 KHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN---TIIFYRGKNY 120
E VKV+ + ++ A L S G+++ ++ + II YRGKNY
Sbjct: 687 HRELVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNY 738
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH--EYAEVLAQLSKGIVIDINP 108
V+VG GI +V +H W+ E VK+ K EP+ ++ EVL + + G+VI
Sbjct: 263 VKVGSAGITQALVEAIHEKWEVDEVVKL--KFSEPYSLNMKRTHEVLEKKTGGLVI-WRS 319
Query: 109 SNTIIFYRGKNY 120
++++ YRG +Y
Sbjct: 320 GSSVVLYRGISY 331
>gi|297803062|ref|XP_002869415.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
gi|297315251|gb|EFH45674.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
Length = 775
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 KEKRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGG 61
+ +R A + ++L ELP D E +T+EER ++ ++ +GRR ++ G
Sbjct: 580 RAERDLAKVQKDLDPSELPT------DSETITEEERLLYRKIGLSMDPFLLLGRREVYDG 633
Query: 62 VVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPS---NTIIFYRGK 118
+ NMHLHWK E VKV+ + ++ A L S G+++ ++ + +II YRGK
Sbjct: 634 TIENMHLHWKHRELVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYSIILYRGK 693
Query: 119 NY 120
NY
Sbjct: 694 NY 695
>gi|168014862|ref|XP_001759970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688720|gb|EDQ75095.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 512
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPC-----E 84
E +T+EE + L++ + K Y+ +GRR +F GV+ NMHLHWK + VK++ K E
Sbjct: 343 EDVTEEEMYTLRKIGLRMKPYLLLGRREVFSGVIENMHLHWKWRQLVKIIVKKSYFMYRE 402
Query: 85 PWKIHEYAEVLAQLSKGIVIDINP---SNTIIFYRGKNY 120
I A +L S G+++ I II YRGKNY
Sbjct: 403 RDDIENIARMLEIESGGVLVGICTIPVGEAIIVYRGKNY 441
>gi|357454755|ref|XP_003597658.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355486706|gb|AES67909.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 880
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 24/144 (16%)
Query: 1 MKEKRKEAWLIEN--------LTKFELPKAPT-EAYDPEILTDEERHYLKRTDEKKKNYV 51
+KE++++A+++ L+K P+ E D EI+TDEER ++ K ++ +
Sbjct: 624 LKEQQRKAFILNKKIERSTMELSKLNAAWKPSGEDIDLEIMTDEERECFRKMGLKMRSCL 683
Query: 52 ------------QVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLS 99
GRRG+F GV+ +H HWK E KV++ ++ ++ L + S
Sbjct: 684 VLGKAISLHSTTSAGRRGVFDGVLEGLHQHWKHREVAKVITMQRLISRVIYTSQFLERES 743
Query: 100 KGIVIDINP---SNTIIFYRGKNY 120
GI++ ++ II YRGKNY
Sbjct: 744 GGILVSVDQLKEGYAIIIYRGKNY 767
>gi|302781424|ref|XP_002972486.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
gi|300159953|gb|EFJ26572.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
Length = 795
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
D E +T+EER+ K+ + ++ +GRRG+F GV+ NMHLHWK E VK++ K +
Sbjct: 598 DRETITEEERYMFKKLGLRMDAFLLIGRRGVFDGVIENMHLHWKHRELVKLILKEKDKAI 657
Query: 88 IHEYAEVLAQLSKGIVIDI 106
E A++L S GI++ +
Sbjct: 658 ALEVAKMLEIESGGILVGV 676
>gi|297603821|ref|NP_001054631.2| Os05g0145300 [Oryza sativa Japonica Group]
gi|255676015|dbj|BAF16545.2| Os05g0145300, partial [Oryza sativa Japonica Group]
Length = 92
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 4 KRKEAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVV 63
K+K A L++ L K+ELP P +DPE+LT E+ K+ + +NYV VG RG+FGGVV
Sbjct: 12 KKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVV 71
Query: 64 LNMHLHWKKHETVKVVS 80
NMH+HWK HETV+V
Sbjct: 72 QNMHMHWKFHETVQVCC 88
>gi|302759655|ref|XP_002963250.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
gi|300168518|gb|EFJ35121.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
Length = 274
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 14 LTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKH 73
L +++ P+ +DPE L+ E LK + +++ +G+RG++ G + +++ HW H
Sbjct: 83 LQEYDFPEDKP-VHDPEYLSPEFMTALKERNRCIDDFLTIGKRGVWEGFIRDIYSHWINH 141
Query: 74 ETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN-TIIFYRGKNY 120
ET+++ + K+ AE +A++S +VI + + I YRG+N+
Sbjct: 142 ETLRIYCEGYPLRKLRPMAEKVARMSGAVVIAVTEETMSFILYRGRNF 189
>gi|147838476|emb|CAN69859.1| hypothetical protein VITISV_037991 [Vitis vinifera]
Length = 371
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 54 GRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINP---SN 110
GRRG+F GV+ +H HWK E VKV++ ++ A++L S G+++ I+ +
Sbjct: 119 GRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGH 178
Query: 111 TIIFYRGKNY 120
II YRGKNY
Sbjct: 179 AIIIYRGKNY 188
>gi|297612106|ref|NP_001068192.2| Os11g0592400 [Oryza sativa Japonica Group]
gi|255680227|dbj|BAF28555.2| Os11g0592400, partial [Oryza sativa Japonica Group]
Length = 108
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 54 GRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN--- 110
GRRG+F G + NMHLHWK E VK++ K + + A L S GI++ ++ +
Sbjct: 8 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGY 67
Query: 111 TIIFYRGKNY 120
I+ +RGK+Y
Sbjct: 68 AIVVFRGKDY 77
>gi|297807647|ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
gi|297317544|gb|EFH47966.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 53 VGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDI---NPS 109
+GRRG+F G++ +H HWK E KV++ ++ A+ L S G++I I
Sbjct: 600 LGRRGVFVGIMEGLHQHWKHREVAKVITMQKIFSRVVYTAKSLEAESNGVLISIEKLKEG 659
Query: 110 NTIIFYRGKNY 120
+ I+ YRGKNY
Sbjct: 660 HAILIYRGKNY 670
>gi|413918578|gb|AFW58510.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 681
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 20 PKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVV 79
P AP A + + DE R L+ + + ++VG+ GI G+V +H W+ E VK+
Sbjct: 132 PSAPPSAAELALPRDELRR-LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLR 190
Query: 80 SKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ + E+L + + G+VI +TII YRG NY
Sbjct: 191 CEDVWAMNMRRTHEILERKTGGLVI-WRSGSTIILYRGTNY 230
>gi|154986385|gb|ABS89146.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 668
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 20 PKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVV 79
P AP A + + DE R L+ + + ++VG+ GI G+V +H W+ E VK+
Sbjct: 119 PSAPPSAAELALPRDELRR-LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLR 177
Query: 80 SKPCEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ + E+L + + G+VI +TII YRG NY
Sbjct: 178 CEDVWAMNMRRTHEILERKTGGLVI-WRSGSTIILYRGTNY 217
>gi|115436730|ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|75109409|sp|Q5VMQ5.1|CAF1P_ORYSJ RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|55297418|dbj|BAD69270.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|55297612|dbj|BAD68987.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113532653|dbj|BAF05036.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|215694476|dbj|BAG89423.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618506|gb|EEE54638.1| hypothetical protein OsJ_01906 [Oryza sativa Japonica Group]
Length = 701
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT EE L + K K + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G VI + I +RG+NY
Sbjct: 243 NVCQQLEEKVGGKVIH-HQGGVIFLFRGRNY 272
>gi|218188278|gb|EEC70705.1| hypothetical protein OsI_02075 [Oryza sativa Indica Group]
Length = 701
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT EE L + K K + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G VI + I +RG+NY
Sbjct: 243 NVCQQLEEKVGGKVIH-HQGGVIFLFRGRNY 272
>gi|242082009|ref|XP_002445773.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
gi|241942123|gb|EES15268.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
Length = 674
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT EE L + K K + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 183 EPLTKEEVFELVKGSLKTKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G VI I +RG+NY
Sbjct: 243 NICQQLEEKVGGKVIH-RQGGVIFLFRGRNY 272
>gi|225445140|ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
Length = 752
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT+EE L + K K + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 301
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + + G VI + +RG+NY
Sbjct: 302 NVRQQLEEKTGGKVI-YGKGGVLFLFRGRNY 331
>gi|357132246|ref|XP_003567742.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like
[Brachypodium distachyon]
Length = 702
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E L+ EE L + + K K + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 181 EPLSKEEVAELVKGNLKAKRQLNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMD 240
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G VI + +RG+NY
Sbjct: 241 NVCQQLEERVGGKVIH-RQGGVVFLFRGRNY 270
>gi|162462028|ref|NP_001105220.1| CRS2-associated factor 1, chloroplastic precursor [Zea mays]
gi|75147312|sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|30349367|gb|AAP22135.1| CRS2-associated factor 1 [Zea mays]
Length = 674
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT EE L + K K + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 183 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMD 242
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + G VI I +RG+NY
Sbjct: 243 NICHQLEEKVGGKVIH-RQGGVIFLFRGRNY 272
>gi|125602364|gb|EAZ41689.1| hypothetical protein OsJ_26223 [Oryza sativa Japonica Group]
Length = 615
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 30 EILTDEERHYL--KRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
E LT ER +L K + K + +GR G+ ++ ++H HWK E V+V
Sbjct: 131 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 190
Query: 88 IHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G++I + +I YRG++Y
Sbjct: 191 MQNVCHQLEDKTGGLIIHRH-GGQLILYRGRHY 222
>gi|297738777|emb|CBI28022.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT+EE L + K K + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 301
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + + G VI + +RG+NY
Sbjct: 302 NVRQQLEEKTGGKVI-YGKGGVLFLFRGRNY 331
>gi|356495236|ref|XP_003516485.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 705
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT +E + L + EK + +GR G+ ++ N+H +W + K+ + +
Sbjct: 237 EPLTKDEINRLIKATEKSSRQLNIGRDGLTHNMLENIHTYWMRRSACKIKCRGVCTVDMD 296
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + + G +I + T+ +RGKNY
Sbjct: 297 NVCQQLEERTGGKII-YRQAGTVYLFRGKNY 326
>gi|194688996|gb|ACF78582.1| unknown [Zea mays]
gi|194700546|gb|ACF84357.1| unknown [Zea mays]
gi|223974875|gb|ACN31625.1| unknown [Zea mays]
Length = 560
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT EE L + K K + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 69 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMD 128
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + G VI I +RG+NY
Sbjct: 129 NICHQLEEKVGGKVIH-RQGGVIFLFRGRNY 158
>gi|356560247|ref|XP_003548405.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Glycine
max]
Length = 396
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 32 LTDEERHYLKRTDEKKKN--YVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
L+ EER L E+ K +V +GR G+ ++ +H HWK E V++ ++
Sbjct: 159 LSSEERKALVSQFERSKTNRHVNLGRDGLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDMN 218
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + G VI T+I YRG+NY
Sbjct: 219 NICTQLEDKTFGKVI-FRHGGTLILYRGRNY 248
>gi|326525102|dbj|BAK07821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 30 EILTDEERHYL--KRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
E LT ER +L K + K + +GR G+ ++ ++H HWK E V+V
Sbjct: 161 EPLTPAERSFLVEKCQKNRTKRQINLGRDGLTHNMLNDIHNHWKHGEGVRVKCLGVPTVD 220
Query: 88 IHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G++I + +I YRG++Y
Sbjct: 221 MQNVCHELEDKTGGLIIHRH-GGQLILYRGRHY 252
>gi|147799432|emb|CAN76866.1| hypothetical protein VITISV_012308 [Vitis vinifera]
Length = 393
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT+EE L + K K + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 301
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + + G VI + +RG+NY
Sbjct: 302 NVRQQLEEKTGGKVI-YGKGGVLFLFRGRNY 331
>gi|115475027|ref|NP_001061110.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|75133775|sp|Q6Z4U2.1|CAF1M_ORYSJ RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|40253285|dbj|BAD05220.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|40253602|dbj|BAD05547.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113623079|dbj|BAF23024.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|125560323|gb|EAZ05771.1| hypothetical protein OsI_28005 [Oryza sativa Indica Group]
Length = 428
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 30 EILTDEERHYL--KRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
E LT ER +L K + K + +GR G+ ++ ++H HWK E V+V
Sbjct: 155 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 214
Query: 88 IHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G++I + +I YRG++Y
Sbjct: 215 MQNVCHQLEDKTGGLIIHRH-GGQLILYRGRHY 246
>gi|357520913|ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
gi|355524767|gb|AET05221.1| CRS2-associated factor [Medicago truncatula]
Length = 698
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT EE + L R+ K + +GR G ++ N+H HWK+ K+ +
Sbjct: 170 EPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMD 229
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + + G VI I +RG+NY
Sbjct: 230 NVCQQLEEKTGGKVI-YRRGGVIYLFRGRNY 259
>gi|357144801|ref|XP_003573418.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like
[Brachypodium distachyon]
Length = 437
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 30 EILTDEERHYL--KRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
E LT ER ++ K + K V +GR G+ ++ ++H HWK E V+V
Sbjct: 156 EPLTPAERTFVVDKCQRNRTKRQVNLGRDGLTHNMLNDIHNHWKHGEAVRVKCLGVPTVD 215
Query: 88 IHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G++I + +I YRG++Y
Sbjct: 216 MQNVCHELEDKTGGLIIHRH-GGQLILYRGRHY 247
>gi|356527769|ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 723
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT EE L ++ K + + +GR G+ ++ N+H HWK+ K+ K +
Sbjct: 199 EPLTQEEIRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRACKIRCKGVCTVDMD 258
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + + G +I + +RG+NY
Sbjct: 259 NVCHQLEERTGGKIIH-RKGGVLYLFRGRNY 288
>gi|42573097|ref|NP_974645.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|332660445|gb|AEE85845.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 341
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 32 LTDEERHYLKRTDE--KKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
LT+ ER +L + K K V +GR G+ ++ +++ HWK E V+V +
Sbjct: 159 LTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMK 218
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + G V+ + S T++ YRG+NY
Sbjct: 219 NVIFHLEDKTFGQVVSKH-SGTLVLYRGRNY 248
>gi|22329043|ref|NP_194830.2| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75161464|sp|Q8VYD9.1|CAF1M_ARATH RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|18176015|gb|AAL59968.1| unknown protein [Arabidopsis thaliana]
gi|20465409|gb|AAM20129.1| unknown protein [Arabidopsis thaliana]
gi|332660446|gb|AEE85846.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 405
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 32 LTDEERHYLKRTDE--KKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
LT+ ER +L + K K V +GR G+ ++ +++ HWK E V+V +
Sbjct: 159 LTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMK 218
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + G V+ + S T++ YRG+NY
Sbjct: 219 NVIFHLEDKTFGQVVSKH-SGTLVLYRGRNY 248
>gi|14596153|gb|AAK68804.1| Unknown protein [Arabidopsis thaliana]
Length = 284
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 32 LTDEERHYLKRTDE--KKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
LT+ ER +L + K K V +GR G+ ++ +++ HWK E V+V +
Sbjct: 159 LTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMK 218
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + G V+ + S T++ YRG+NY
Sbjct: 219 NVIFHLEDKTFGQVVSKH-SGTLVLYRGRNY 248
>gi|162452193|ref|YP_001614560.1| hypothetical protein sce3920 [Sorangium cellulosum So ce56]
gi|161162775|emb|CAN94080.1| hypothetical protein sce3920 [Sorangium cellulosum So ce56]
Length = 100
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKV-VSKPCEPWKIHE 90
LT ++R +L+ VQ+G+ G+ GVV + ++HE VKV + C P ++ +
Sbjct: 3 LTGKQRRHLRALGHHLDPVVQLGKAGLTDGVVAAVDAALERHELVKVRLGTEC-PDELDD 61
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYR 116
A+ L++ + V TI+ YR
Sbjct: 62 VADTLSERLRAAVAQ-TLGRTILLYR 86
>gi|2980765|emb|CAA18192.1| hypothetical protein [Arabidopsis thaliana]
gi|7270003|emb|CAB79819.1| hypothetical protein [Arabidopsis thaliana]
Length = 392
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 32 LTDEERHYLKR--TDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
LT+ ER +L K K V +GR G+ ++ +++ HWK E V+V +
Sbjct: 159 LTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMK 218
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + G V+ + S T++ YRG+NY
Sbjct: 219 NVIFHLEDKTFGQVVSKH-SGTLVLYRGRNY 248
>gi|326525845|dbj|BAJ93099.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 607
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT E L + + +GR G+ ++ +H HW++ E KV + ++
Sbjct: 230 EPLTSAETRELVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEVCKVRCRGVPTVDMN 289
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + S G VI + YRG+NY
Sbjct: 290 NLCYHLEEKSGGKVIK-RVGGVVFLYRGRNY 319
>gi|255589857|ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
gi|223524018|gb|EEF27274.1| conserved hypothetical protein [Ricinus communis]
Length = 748
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT EE L K + + +GR G+ ++ N+H HWK+ K+ +
Sbjct: 250 EPLTTEEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMD 309
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + + G VI + +RG+NY
Sbjct: 310 NVCQQLEERTGGKVI-YRKGGVVYLFRGRNY 339
>gi|225453847|ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera]
gi|296089125|emb|CBI38828.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 30 EILTDEERHYL--KRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
E LT ER L K + K + +GR G+ ++ ++H HWK E V++
Sbjct: 162 EPLTAAERKILVEKCQRHRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVD 221
Query: 88 IHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G VI ++ YRG+NY
Sbjct: 222 MKNVCTQLEDKTSGKVIHRQ-GGLLVLYRGRNY 253
>gi|224113759|ref|XP_002332503.1| predicted protein [Populus trichocarpa]
gi|222832483|gb|EEE70960.1| predicted protein [Populus trichocarpa]
Length = 699
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 28 DPEILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
DP LT EE L K K + +GR G+ ++ N+H HWK+ K+ K
Sbjct: 246 DP--LTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVD 303
Query: 88 IHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ + L + + G +I + +RG+NY
Sbjct: 304 MDNVCQQLEERTGGKII-YRKGGVLYLFRGRNY 335
>gi|168040806|ref|XP_001772884.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675795|gb|EDQ62286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 463
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
LT E L K+ + +GR G+ ++ +H HWK+ KV K +
Sbjct: 91 LTSAEVRELVTKARKEPRQINLGRDGLTHNMLNLVHEHWKRRRVCKVKCKGVPTVDMDNV 150
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VL + + G +I + + +RG+NY
Sbjct: 151 CRVLEEKTGGKII-LRQGGAVYLFRGRNY 178
>gi|15240416|ref|NP_200300.1| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75170294|sp|Q9FFU1.1|CAF2M_ARATH RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|9758269|dbj|BAB08768.1| unnamed protein product [Arabidopsis thaliana]
gi|332009170|gb|AED96553.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 358
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWKK E V++ + L + S G ++ N N
Sbjct: 164 INLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRN-IN 222
Query: 111 TIIFYRGKNY 120
++ YRG+NY
Sbjct: 223 ILVLYRGRNY 232
>gi|350566233|ref|ZP_08934922.1| RNA-binding protein YhbY [Peptoniphilus indolicus ATCC 29427]
gi|348662982|gb|EGY79606.1| RNA-binding protein YhbY [Peptoniphilus indolicus ATCC 29427]
Length = 95
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
+LT ++R YLK +QVG+ GI GV+ + + HE VK+ P + E
Sbjct: 1 MLTGKQRSYLKSIANTLNPLIQVGKGGIGDGVLSQIDKSLEDHELVKITVLKNSPVEARE 60
Query: 91 YAE 93
E
Sbjct: 61 IVE 63
>gi|297802930|ref|XP_002869349.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315185|gb|EFH45608.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 32 LTDEERHYLKRTDE--KKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
LT+ ER +L + K K V +GR G+ ++ +++ HWK E V+V +
Sbjct: 160 LTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDIYNHWKHAEAVRVKCLGVPTLDMK 219
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + G V+ + T++ YRG+NY
Sbjct: 220 NVIFHLEDKTFGQVVSKH-CGTLVLYRGRNY 249
>gi|268608886|ref|ZP_06142613.1| hypothetical protein RflaF_05249 [Ruminococcus flavefaciens FD-1]
Length = 100
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 41/86 (47%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
+LT ++R YL+ + Q+G+ G+ + ++ +K E +K+ W E
Sbjct: 1 MLTSKQRAYLRGIASTYETIYQIGKGGVTEAMCKDIAEALRKRELIKLRVLENSGWTARE 60
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYR 116
A+ +A+ + V+ + S ++F R
Sbjct: 61 AADAVAEQTGADVVQVIGSKFVLFKR 86
>gi|258645346|ref|ZP_05732815.1| RNA-binding protein YhbY [Dialister invisus DSM 15470]
gi|260402695|gb|EEW96242.1| RNA-binding protein YhbY [Dialister invisus DSM 15470]
Length = 96
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
+LT +++ YLK T VQ+G+ GI V+ ++ E +KV I +
Sbjct: 1 MLTGKQKQYLKSTAVDFSAVVQIGKEGITDNVINSVTEALAARELIKVKINQNSAENIRK 60
Query: 91 YAEVLAQLSKGIVIDINPSNTIIF 114
A++L++ S ++ I N I+F
Sbjct: 61 AAKLLSEESGCEIVQIIGRNCILF 84
>gi|356496030|ref|XP_003516873.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 358
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWKK E V++ + L S G VI N N
Sbjct: 163 INLGKGGVTHNMLGDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRN-IN 221
Query: 111 TIIFYRGKNY 120
++ YRG+NY
Sbjct: 222 ILLLYRGRNY 231
>gi|115475115|ref|NP_001061154.1| Os08g0188000 [Oryza sativa Japonica Group]
gi|113623123|dbj|BAF23068.1| Os08g0188000, partial [Oryza sativa Japonica Group]
Length = 361
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWK+ E V++ + L + G VI N N
Sbjct: 161 INLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRN-IN 219
Query: 111 TIIFYRGKNY 120
+I YRG+NY
Sbjct: 220 ILILYRGRNY 229
>gi|356530475|ref|XP_003533806.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 388
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWKK E V++ + L S G VI N N
Sbjct: 163 INLGKGGVTHNMLGDIHNHWKKAEVVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRN-IN 221
Query: 111 TIIFYRGKNY 120
++ YRG+NY
Sbjct: 222 ILLLYRGRNY 231
>gi|168045030|ref|XP_001774982.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673729|gb|EDQ60248.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
LT E L +K+ + +GR G ++ ++H +WK+ + V++ K +
Sbjct: 91 LTTAEVEELVMQCQKEDRQLNLGRDGFTHNMLASVHDYWKRRQVVRIKCKGVPTVDMDNV 150
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
VL + G +I + +RG+NY
Sbjct: 151 CTVLEDKTGGKIIS-RAGGVVYLFRGRNY 178
>gi|255541412|ref|XP_002511770.1| conserved hypothetical protein [Ricinus communis]
gi|223548950|gb|EEF50439.1| conserved hypothetical protein [Ricinus communis]
Length = 411
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 32 LTDEERHYLKRTDE--KKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
LT+ ER L + + K K + +GR G+ ++ ++H HWK E V++ +
Sbjct: 157 LTNAERKILVESCQRHKTKKQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMK 216
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + G +I + ++ YRG+NY
Sbjct: 217 NVCTQLEDKTFGKIIHRH-CGLLVLYRGRNY 246
>gi|374338655|ref|YP_005095372.1| RNA binding protein [Streptococcus macedonicus ACA-DC 198]
gi|372284772|emb|CCF03065.1| RNA binding protein [Streptococcus macedonicus ACA-DC 198]
Length = 110
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
+LT ++R +LK K VQ+G+ G+ + ++ + E +KV IHE
Sbjct: 7 MLTSKQRAFLKSQAHSMKPIVQIGKNGLNDQIKTSVRIALDARELIKVTLLQNTDEDIHE 66
Query: 91 YAEVL 95
AE+L
Sbjct: 67 VAEIL 71
>gi|375336636|ref|ZP_09777980.1| hypothetical protein SbacW_06573 [Succinivibrionaceae bacterium
WG-1]
Length = 99
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
LT ++ +YLK ++ K V +G+ GI V+ + + HE +KV + + + E
Sbjct: 3 LTTKQLNYLKLKAQELKPVVMIGKNGITENVINEIKSSIEHHELIKVKAHVEDRTQKEEL 62
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYRGK 118
A LA S+ V+ +N +F + K
Sbjct: 63 ANYLANASESTVVQYLGNNITLFKKAK 89
>gi|242078343|ref|XP_002443940.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
gi|241940290|gb|EES13435.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
Length = 437
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 30 EILTDEERHYL--KRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK 87
E LT ER +L K + K + +GR G+ ++ ++H +WK E V++
Sbjct: 162 EPLTPAERAFLVDKCQKNRTKRQINLGRDGLTHNMLNDIHNNWKTCEAVRIKCLGVPTVD 221
Query: 88 IHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G++I + S +I YRG++Y
Sbjct: 222 MQNVCHQLEDKTGGVIIHRHGS-LLILYRGRHY 253
>gi|224124340|ref|XP_002319307.1| predicted protein [Populus trichocarpa]
gi|222857683|gb|EEE95230.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWK+ E V++ + L S G V+ N N
Sbjct: 160 INLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVVYRN-IN 218
Query: 111 TIIFYRGKNY 120
++ YRG+NY
Sbjct: 219 ILLLYRGRNY 228
>gi|91773388|ref|YP_566080.1| hypothetical protein Mbur_1419 [Methanococcoides burtonii DSM 6242]
gi|91712403|gb|ABE52330.1| RNA-binding protein [Methanococcoides burtonii DSM 6242]
Length = 86
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 34 DEERHYLKRTDEKK-KNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWK--IHE 90
D+ER Y R++ K + VG+ GI +++ + H K+ VKV ++ I
Sbjct: 2 DKERLYKLRSEATNIKPIINVGKGGITDQLIMELKKHIKERHLVKVKVLKSASYEDGIDA 61
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYR 116
AE LA+ ++ VID+ S +++ YR
Sbjct: 62 IAENLAEATRTTVIDVRGS-SVVLYR 86
>gi|380483510|emb|CCF40577.1| cleft lip and palate transmembrane protein 1 [Colletotrichum
higginsianum]
Length = 666
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 7 EAWLIENLTKFELPKAPTEAYDPEILTDEERHYLKRTDEKKKNYVQVGRRGIF 59
E W I + L AP ++ P ++ E++H L T+EK K Y ++ + ++
Sbjct: 446 ELWKITTIVNVSLKPAPPGSWLPYVIAVEDKHKLSETEEKTKEYDEIAFKYMY 498
>gi|406888285|gb|EKD34815.1| hypothetical protein ACD_75C02178G0007 [uncultured bacterium]
Length = 115
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
ILT ++ +LK VQ+G+ G+ G+V ++ HE +KV + H
Sbjct: 10 SILTTRQKQFLKGLAHPLSPLVQIGKEGMSQGIVNTINAELLNHELIKVKIGNNSGLEKH 69
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYR 116
++ A+L+ I++ + T + Y+
Sbjct: 70 TTSQEAAELTGSILVQL-IGKTFVLYK 95
>gi|302754228|ref|XP_002960538.1| hypothetical protein SELMODRAFT_402884 [Selaginella moellendorffii]
gi|300171477|gb|EFJ38077.1| hypothetical protein SELMODRAFT_402884 [Selaginella moellendorffii]
Length = 961
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 20/26 (76%)
Query: 95 LAQLSKGIVIDINPSNTIIFYRGKNY 120
LA+LS GIV+D+ T+I +RGKNY
Sbjct: 172 LARLSGGIVLDVLEDRTVIMFRGKNY 197
>gi|218884426|ref|YP_002428808.1| putative RNA-binding protein containing KH domain [Desulfurococcus
kamchatkensis 1221n]
gi|218766042|gb|ACL11441.1| putative RNA-binding protein containing KH domain [Desulfurococcus
kamchatkensis 1221n]
Length = 97
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKV----VSKPCEPWKIHEYAEVLAQLSKGIVIDI 106
VQ+G+ G+ G + + L +KH VK+ + E + IH AE +A L+ G + ++
Sbjct: 24 VQLGKNGVTQGFIEEVRLRLRKHGVVKIKVLKSYRRSEGFDIHRLAEEIAGLTGGKIYEV 83
Query: 107 NPSNTIIFYRGKN 119
TI RG+
Sbjct: 84 R-GFTITLIRGEG 95
>gi|357132021|ref|XP_003567631.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like
[Brachypodium distachyon]
Length = 607
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT E L + + +GR G+ ++ +H HW++ E KV + +
Sbjct: 231 EPLTPAEVRALVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMK 290
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
L + S G VI + YRG+NY
Sbjct: 291 NLCYHLEEKSGGKVIH-RVGGVVFLYRGRNY 320
>gi|413921149|gb|AFW61081.1| hypothetical protein ZEAMMB73_173916 [Zea mays]
Length = 291
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWK+ E V++ + L + G V+ + N
Sbjct: 162 INLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRS-IN 220
Query: 111 TIIFYRGKNY 120
II YRG+NY
Sbjct: 221 IIILYRGRNY 230
>gi|226530577|ref|NP_001147995.1| LOC100281604 [Zea mays]
gi|195615022|gb|ACG29341.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWK+ E V++ + L + G V+ + N
Sbjct: 162 INLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRS-IN 220
Query: 111 TIIFYRGKNY 120
II YRG+NY
Sbjct: 221 IIILYRGRNY 230
>gi|390938937|ref|YP_006402675.1| putative RNA-binding protein containing KH domain, possibly
ribosomal protein [Desulfurococcus fermentans DSM 16532]
gi|390192044|gb|AFL67100.1| putative RNA-binding protein containing KH domain, possibly
ribosomal protein [Desulfurococcus fermentans DSM 16532]
Length = 99
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKV----VSKPCEPWKIHEYAEVLAQLSKGIVIDI 106
VQ+G+ G+ G + + L +KH VK+ + E + IH AE +A L+ G + ++
Sbjct: 26 VQLGKNGVTQGFIEEVRLRLRKHGVVKIRVLKSYRRSEGFDIHRLAEEIAGLTGGKIYEV 85
Query: 107 NPSNTIIFYRGKN 119
TI RG+
Sbjct: 86 R-GFTITLIRGEG 97
>gi|414884471|tpg|DAA60485.1| TPA: hypothetical protein ZEAMMB73_919812, partial [Zea mays]
Length = 250
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSK 81
E LT EE L + K K + +GR G+ ++ N+H HWK+ K+ K
Sbjct: 183 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCK 234
>gi|238014734|gb|ACR38402.1| unknown [Zea mays]
gi|413921148|gb|AFW61080.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWK+ E V++ + L + G V+ + N
Sbjct: 162 INLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRS-IN 220
Query: 111 TIIFYRGKNY 120
II YRG+NY
Sbjct: 221 IIILYRGRNY 230
>gi|242080803|ref|XP_002445170.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
gi|241941520|gb|EES14665.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
Length = 353
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWK+ E V++ + L + G VI N
Sbjct: 166 INLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVI-YRSIN 224
Query: 111 TIIFYRGKNY 120
II YRG+NY
Sbjct: 225 IIILYRGRNY 234
>gi|373454564|ref|ZP_09546430.1| YhbY family putative RNA-binding protein [Dialister succinatiphilus
YIT 11850]
gi|371935839|gb|EHO63582.1| YhbY family putative RNA-binding protein [Dialister succinatiphilus
YIT 11850]
Length = 96
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
+LT +++ YLK YVQ+G+ G+ VV ++ E VKV I +
Sbjct: 1 MLTGKQKQYLKSEAVSLPAYVQIGKEGMTSSVVQSVEDVLLARELVKVKINQNSDEDIRD 60
Query: 91 YAEVLAQLSKGIVIDINPSNTIIF 114
A +LA+ ++ I N ++F
Sbjct: 61 TASLLAEKLDCEIVQIIGRNCVLF 84
>gi|449432211|ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Cucumis
sativus]
gi|449480099|ref|XP_004155799.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
mitochondrial-like [Cucumis sativus]
Length = 392
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 25 EAYDPEILTDEERHYL--KRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKP 82
EA E L ER L K K K + +GR G+ ++ ++H HW+ E V++
Sbjct: 146 EAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLG 205
Query: 83 CEPWKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G +I + ++ YRG+NY
Sbjct: 206 VPTVDMKNVCTQLEDKTFGKIIHRH-GGFLVLYRGRNY 242
>gi|375089691|ref|ZP_09736016.1| YhbY family putative RNA-binding protein [Facklamia languida CCUG
37842]
gi|374566538|gb|EHR37777.1| YhbY family putative RNA-binding protein [Facklamia languida CCUG
37842]
Length = 105
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 32 LTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEY 91
L ++ YL++ +K+K Q+G+ G+ + + K E VK +I E
Sbjct: 4 LNKQQMKYLRKYAQKEKAIFQIGKLGLTEVFIQQVEAALNKRELVKFNVLQNSDEEIKEV 63
Query: 92 AEVLAQLSKGIVIDINPSNTIIFYR 116
A+ L+++ + +V+ NT I YR
Sbjct: 64 AQQLSEVLQAVVVQ-TIGNTAILYR 87
>gi|297792957|ref|XP_002864363.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
gi|297310198|gb|EFH40622.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 51 VQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHEYAEVLAQLSKGIVIDINPSN 110
+ +G+ G+ ++ ++H HWKK E V++ + L + S G ++ N
Sbjct: 160 INLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIV-YRHIN 218
Query: 111 TIIFYRGKNY 120
++ YRG+NY
Sbjct: 219 ILVLYRGRNY 228
>gi|317106625|dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas]
Length = 415
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 28 DPEILTDEERHYL--KRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEP 85
DP LT+ ER L + K K + +GR G+ ++ ++H HWK E V++
Sbjct: 160 DP--LTNAERKILVAQCQRNKTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPT 217
Query: 86 WKIHEYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + G +I + +++ YRG+NY
Sbjct: 218 VDMKNVCSQLEDKTFGKIIHRH-CGSLVLYRGRNY 251
>gi|365904268|ref|ZP_09442027.1| YhbY domain RNA binding protein [Lactobacillus versmoldensis KCTC
3814]
Length = 104
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 31 ILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIHE 90
I+ ++ YL+ + K V+VGR GI ++ + K+E +KV + +
Sbjct: 2 IIKGKKNRYLRSQAQTMKPVVRVGREGISDNLLTQIQQLLYKNELIKVSFLQNTMAEPQQ 61
Query: 91 YAEVLAQLSKGIVIDINPSNTIIFYR 116
A+ L +L GI + + IFY+
Sbjct: 62 LADALTELDGGIALIQTIGSKAIFYK 87
>gi|449443167|ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
gi|449521361|ref|XP_004167698.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
Length = 745
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 30 EILTDEERHYLKRTDEKKKNYVQVGRRGIFGGVVLNMHLHWKKHETVKVVSKPCEPWKIH 89
E LT EE L R + +GR G+ ++ N+H WK+ K+ K +
Sbjct: 250 EPLTKEEIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMD 309
Query: 90 EYAEVLAQLSKGIVIDINPSNTIIFYRGKNY 120
+ L + + G +I + + YRG+NY
Sbjct: 310 NVKQQLEERTGGKII-YSRGGALYLYRGRNY 339
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,065,419,374
Number of Sequences: 23463169
Number of extensions: 79697242
Number of successful extensions: 188241
Number of sequences better than 100.0: 270
Number of HSP's better than 100.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 187721
Number of HSP's gapped (non-prelim): 446
length of query: 121
length of database: 8,064,228,071
effective HSP length: 88
effective length of query: 33
effective length of database: 5,999,469,199
effective search space: 197982483567
effective search space used: 197982483567
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)