Query         035827
Match_columns 507
No_of_seqs    180 out of 2059
Neff          11.3
Searched_HMMs 46136
Date          Fri Mar 29 06:48:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035827.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035827hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.9E-88 4.2E-93  641.0  47.7  463   28-504    24-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0   3E-83 6.5E-88  629.3  49.1  482   16-503    14-498 (499)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 7.6E-83 1.6E-87  592.7  41.1  479    7-504     8-499 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0 1.4E-81   3E-86  619.4  46.5  471   27-503    54-533 (543)
  5 PLN02966 cytochrome P450 83A1  100.0 2.7E-81 5.9E-86  614.1  46.8  484   14-502    13-498 (502)
  6 PLN02183 ferulate 5-hydroxylas 100.0 3.2E-81   7E-86  615.0  45.8  470   22-504    28-512 (516)
  7 PLN02687 flavonoid 3'-monooxyg 100.0 1.4E-80 2.9E-85  610.8  48.2  470   28-503    32-508 (517)
  8 PLN03112 cytochrome P450 famil 100.0   8E-80 1.7E-84  606.7  48.1  485   17-505    19-509 (514)
  9 PLN00110 flavonoid 3',5'-hydro 100.0 1.3E-79 2.9E-84  599.8  46.7  470   24-504    25-497 (504)
 10 PLN00168 Cytochrome P450; Prov 100.0 1.4E-78   3E-83  596.8  48.3  470   26-505    31-518 (519)
 11 PTZ00404 cytochrome P450; Prov 100.0 9.5E-79 2.1E-83  594.8  45.2  478    4-503     3-482 (482)
 12 PLN02394 trans-cinnamate 4-mon 100.0 4.9E-78 1.1E-82  593.0  48.3  473   21-504    21-502 (503)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 2.8E-78   6E-83  585.0  38.8  456   28-505    33-497 (497)
 14 PLN02655 ent-kaurene oxidase   100.0 1.4E-76   3E-81  575.4  45.0  458   32-505     1-465 (466)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 4.9E-77 1.1E-81  540.0  36.9  458   27-504    47-518 (519)
 16 PLN02290 cytokinin trans-hydro 100.0 7.5E-77 1.6E-81  585.9  39.0  454   28-504    40-515 (516)
 17 PLN03018 homomethionine N-hydr 100.0 5.1E-75 1.1E-79  568.1  49.0  472   28-505    38-525 (534)
 18 PLN02500 cytochrome P450 90B1  100.0 1.8E-75   4E-80  571.7  41.0  441   24-502    32-488 (490)
 19 PLN02774 brassinosteroid-6-oxi 100.0   2E-74 4.3E-79  559.8  39.4  435   24-502    25-462 (463)
 20 PLN02169 fatty acid (omega-1)- 100.0 1.6E-73 3.5E-78  555.8  41.7  454   29-503    30-499 (500)
 21 PLN03195 fatty acid omega-hydr 100.0 1.9E-73 4.1E-78  561.2  42.4  456   31-504    31-516 (516)
 22 PF00067 p450:  Cytochrome P450 100.0   7E-75 1.5E-79  570.9  30.5  456   32-500     1-463 (463)
 23 PLN02738 carotene beta-ring hy 100.0 5.5E-73 1.2E-77  559.2  42.8  458   28-505   113-596 (633)
 24 PLN02196 abscisic acid 8'-hydr 100.0 5.8E-73 1.3E-77  549.0  41.0  429   27-503    32-462 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0   9E-72 1.9E-76  540.1  38.6  437   26-504     3-450 (452)
 26 PLN02987 Cytochrome P450, fami 100.0 6.4E-71 1.4E-75  532.3  42.6  461    1-503     1-468 (472)
 27 PLN02302 ent-kaurenoic acid ox 100.0 1.1E-70 2.5E-75  540.7  43.0  442   26-505    38-489 (490)
 28 PLN02936 epsilon-ring hydroxyl 100.0 1.3E-70 2.9E-75  535.6  40.0  453   31-505    13-483 (489)
 29 PLN02426 cytochrome P450, fami 100.0 6.2E-69 1.4E-73  522.6  44.4  443   38-505    49-501 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0   9E-68 1.9E-72  467.3  34.3  462   11-504    13-485 (486)
 31 PLN02648 allene oxide synthase 100.0 5.7E-61 1.2E-65  459.1  31.9  408   27-475    14-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 3.6E-56 7.8E-61  421.5  32.8  383   52-503    24-410 (411)
 33 PF12273 RCR:  Chitin synthesis  75.6     3.6 7.8E-05   32.1   3.4   15   19-33     21-35  (130)
 34 PF12508 DUF3714:  Protein of u  65.8     1.2 2.7E-05   37.3  -1.2   43  355-399    52-94  (200)
 35 PF12554 MOZART1:  Mitotic-spin  64.5      19 0.00041   22.2   4.0   42  295-336     6-47  (48)
 36 PF05393 Hum_adeno_E3A:  Human   53.9      22 0.00048   24.9   3.3    6   37-42     66-71  (94)
 37 PF14129 DUF4296:  Domain of un  47.6   1E+02  0.0022   21.9   7.4   51  291-341    29-79  (87)
 38 PF05952 ComX:  Bacillus compet  45.5      21 0.00045   22.9   2.1   26  316-341     3-28  (57)
 39 PF14459 Prok-E2_C:  Prokaryoti  41.9     9.9 0.00022   27.6   0.3   18  432-449   103-120 (131)
 40 PRK06789 flagellar motor switc  40.3      22 0.00048   24.3   1.8   41  361-401    21-63  (74)
 41 KOG0114 Predicted RNA-binding   37.8 1.2E+02  0.0027   22.3   5.2   61   28-91     10-76  (124)
 42 PF15300 INT_SG_DDX_CT_C:  INTS  34.4      29 0.00062   23.1   1.5   16  354-369    39-54  (65)
 43 PF09201 SRX:  SRX;  InterPro:   34.1      34 0.00074   26.5   2.1   24  444-467    18-41  (148)
 44 TIGR03779 Bac_Flav_CT_M Bacter  33.6      10 0.00023   35.8  -0.8   44  355-400   255-298 (410)
 45 PF15206 FAM209:  FAM209 family  33.4      42 0.00092   25.9   2.5   36    6-41     42-77  (150)
 46 cd05024 S-100A10 S-100A10: A s  32.8 1.4E+02   0.003   21.6   4.9   39  270-309    45-83  (91)
 47 PHA03049 IMV membrane protein;  32.7   1E+02  0.0022   20.4   3.7   25   17-41     18-42  (68)
 48 PF14483 Cut8_M:  Cut8 dimerisa  32.4      75  0.0016   18.5   2.9   12  323-334    24-35  (38)
 49 COG0851 MinE Septum formation   30.2 1.6E+02  0.0034   21.0   4.6   17  325-341    35-51  (88)
 50 PF12273 RCR:  Chitin synthesis  29.5      26 0.00057   27.3   1.0   26    5-30      4-29  (130)
 51 PF08492 SRP72:  SRP72 RNA-bind  29.2      37  0.0008   22.1   1.4    7  418-424    44-50  (59)
 52 PF01102 Glycophorin_A:  Glycop  29.1      49  0.0011   25.3   2.3   14   14-27     81-94  (122)
 53 PRK10597 DNA damage-inducible   28.8 1.5E+02  0.0032   20.8   4.3   37   54-90     24-68  (81)
 54 KOG3506 40S ribosomal protein   28.7      26 0.00056   22.0   0.6   11  437-447    12-22  (56)
 55 COG1759 5-formaminoimidazole-4  26.0 1.1E+02  0.0025   27.8   4.2   69  359-460   276-351 (361)
 56 PF13260 DUF4051:  Protein of u  25.8      97  0.0021   18.8   2.6   20    1-20      1-20  (54)
 57 KOG2376 Signal recognition par  25.4      39 0.00085   33.4   1.4   28  418-450   582-609 (652)
 58 PHA03162 hypothetical protein;  24.3      76  0.0016   24.4   2.4   24  440-463     2-25  (135)
 59 PRK15321 putative type III sec  24.1 1.2E+02  0.0025   21.8   3.2   44  322-365    32-76  (120)
 60 PF06024 DUF912:  Nucleopolyhed  23.4      96  0.0021   22.9   2.9   28    2-29     67-94  (101)
 61 PF15330 SIT:  SHP2-interacting  22.7 1.3E+02  0.0029   22.4   3.5   10   37-46     45-54  (107)
 62 PF10717 ODV-E18:  Occlusion-de  22.6 2.2E+02  0.0048   19.9   4.2   22    6-27     30-51  (85)
 63 KOG3262 H/ACA small nucleolar   22.1      57  0.0012   26.7   1.5   36  389-426   106-142 (215)
 64 PF13625 Helicase_C_3:  Helicas  21.7 1.9E+02  0.0041   22.4   4.4   39   52-92     76-114 (129)
 65 COG2101 SPT15 TATA-box binding  21.3      28 0.00061   28.2  -0.3   37  415-451    35-71  (185)
 66 PF07886 BA14K:  BA14K-like pro  21.3      86  0.0019   17.3   1.7   17  431-447    15-31  (31)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-88  Score=641.01  Aligned_cols=463  Identities=47%  Similarity=0.831  Sum_probs=406.6

Q ss_pred             CCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCc-hhhhh
Q 035827           28 KIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPA-LVVTQ  106 (507)
Q Consensus        28 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~-~~~~~  106 (507)
                      +.++||||+++|+|||++++....+|..+.+|.++|||++.+|+|..++|||+|++.++|++.+++..|++|+. .....
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            38899999999999999998433599999999999999999999999999999999999999999999999997 23445


Q ss_pred             hhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHHHH
Q 035827          107 KLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIICRL  186 (507)
Q Consensus       107 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~  186 (507)
                      .+.+++.+++++.+|+.|+.+||+++...++...++++...-.++++.+++.+.+ ...+++||+...+..+++++|+++
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~  182 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRM  182 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHH
Confidence            5666788999998999999999999999999999999988889999999999987 222378999999999999999999


Q ss_pred             hhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccc-hhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhcccccc
Q 035827          187 GFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFP-FMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLDPKRT  265 (507)
Q Consensus       187 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  265 (507)
                      +||.++...  +.+...++...+.+.......+.+.+++| +++++....+..+.......++..+++..|+++++.. .
T Consensus       183 ~fG~rf~~~--~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~  259 (489)
T KOG0156|consen  183 LFGRRFEEE--DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-G  259 (489)
T ss_pred             HhCCccccC--CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c
Confidence            999999974  22355668888888888888888899999 6777664446667777777779999999999988765 2


Q ss_pred             ccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhCCCCC
Q 035827          266 KAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVGGKKS  345 (507)
Q Consensus       266 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~~  345 (507)
                      .+  ...|+++.+++..++++... +++++|...+.++++||+|||++++.|++.+|++||++|+|+++||++++|.+ +
T Consensus       260 ~~--~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~-r  335 (489)
T KOG0156|consen  260 DE--EGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG-R  335 (489)
T ss_pred             cC--CCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-C
Confidence            11  33899999998877544222 99999999999999999999999999999999999999999999999999987 5


Q ss_pred             CCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCCCCCCccccC
Q 035827          346 FVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDR  425 (507)
Q Consensus       346 ~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~  425 (507)
                      .++.+|+.+||||+|||+|++|++|++|..+||.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||+++
T Consensus       336 ~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~  415 (489)
T KOG0156|consen  336 LVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDS  415 (489)
T ss_pred             CCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCC
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             CcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEEEeeecC
Q 035827          426 SIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFLLAKDHE  504 (507)
Q Consensus       426 ~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  504 (507)
                      + +.+.....++|||.|+|+|||..+|++|+.++++.|+++|+|+.+++ +   +++.... ++...++++.....+|.
T Consensus       416 ~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~---~d~~e~~-~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  416 N-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-K---VDMEEAG-LTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             c-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-C---CCCcccc-cceecCCcceeeeecCC
Confidence            5 33336789999999999999999999999999999999999999876 2   3344443 67777788888887764


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3e-83  Score=629.28  Aligned_cols=482  Identities=49%  Similarity=0.922  Sum_probs=392.2

Q ss_pred             HHHHhhccccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcc
Q 035827           16 LFLFSVNTYQQKKIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQ   95 (507)
Q Consensus        16 ~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~   95 (507)
                      +++++..+..+++.+.||||+++|++||+..+...+++.++.+++++||++|++++|+.++|+++||+++++|+.++...
T Consensus        14 ~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~   93 (499)
T PLN03234         14 AAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLN   93 (499)
T ss_pred             HHHHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCcc
Confidence            33444444445667889999999999999887444788899999999999999999999999999999999999988777


Q ss_pred             cCCCCchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHH
Q 035827           96 FSSRPALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIM  175 (507)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~  175 (507)
                      |..++...........+....+...++.|+++||.++.+.|+++.++.+.+.+++.++.+++.+.....+++++|+.+.+
T Consensus        94 f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~  173 (499)
T PLN03234         94 FTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELL  173 (499)
T ss_pred             ccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHH
Confidence            87777543332222223344455678999999998667899999999999999999999999997655567789999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHH
Q 035827          176 MSLSCNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQEL  255 (507)
Q Consensus       176 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (507)
                      ..+++|+++.++||.+++...   .....+.+.............+...+|++.++..+.+..++..++.+.+.++++..
T Consensus       174 ~~~t~dvi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  250 (499)
T PLN03234        174 LSFTNCVVCRQAFGKRYNEYG---TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQEL  250 (499)
T ss_pred             HHHHHHHHHHHHhCCcccccc---hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999887532   12334444444443332222344456666555444445567778888999999999


Q ss_pred             HHhhccccccccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHH
Q 035827          256 IDEHLDPKRTKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEE  335 (507)
Q Consensus       256 i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~E  335 (507)
                      ++++++......  ...|+++.+++..++++....+++++|.+++.++++||+|||+++++|++++|++||++|+|+|+|
T Consensus       251 i~~~~~~~~~~~--~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~E  328 (499)
T PLN03234        251 LDETLDPNRPKQ--ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDE  328 (499)
T ss_pred             HHHHHhhcccCC--CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            988765432211  456899999876544322236899999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCC-CCC
Q 035827          336 IRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAW-ENP  414 (507)
Q Consensus       336 i~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p  414 (507)
                      +++++++. +.++++++.+|||++|||+|++|++|++++.++|.+.+|++++||.|||||.|.++++.+||||++| +||
T Consensus       329 i~~~~~~~-~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P  407 (499)
T PLN03234        329 VRNVIGDK-GYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNP  407 (499)
T ss_pred             HHHHhCCC-CCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCCh
Confidence            99999764 6789999999999999999999999999987789999999999999999999999999999999999 899


Q ss_pred             CCCCCCccccCCcC--ccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeee
Q 035827          415 EEFNPERFIDRSID--FKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHK  492 (507)
Q Consensus       415 ~~F~P~R~~~~~~~--~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  492 (507)
                      ++||||||+++...  .+..+..++|||+|+|+|+|+++|++|+++++|+|+++|+|+++++.+++.+.....+|+...+
T Consensus       408 ~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  487 (499)
T PLN03234        408 NEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHK  487 (499)
T ss_pred             hhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccccc
Confidence            99999999975432  2335678999999999999999999999999999999999999876544445555677888889


Q ss_pred             ccceEEEeeec
Q 035827          493 KNYLFLLAKDH  503 (507)
Q Consensus       493 ~~~~~v~~~~r  503 (507)
                      ++++++.+++|
T Consensus       488 ~~~~~~~~~~~  498 (499)
T PLN03234        488 KEHLVLAPTKH  498 (499)
T ss_pred             CCCeEEEeecC
Confidence            99888888776


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.6e-83  Score=592.70  Aligned_cols=479  Identities=26%  Similarity=0.417  Sum_probs=371.0

Q ss_pred             HHHHHHHHHHHHHhhccccCCCCCCCCCCCCCcccccccCCCC-CCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHH
Q 035827            7 IILLSLPICLFLFSVNTYQQKKIKLPPGPQGLPFIGNLHQFDV-SKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMA   85 (507)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i   85 (507)
                      ++++++++++++++++...+..++.+|||+++|++||+..+.. ..+.....+...+||+++.++.+.++.++|+||+.+
T Consensus         8 ~l~~~l~~l~y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~eli   87 (499)
T KOG0158|consen    8 LLLILLLVLLYLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELI   87 (499)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHH
Confidence            4444444566677777777777789999999999999887642 223444444444559999999999999999999999


Q ss_pred             HHHHHhcCcccCCCC--chhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhh
Q 035827           86 KETLKTHDLQFSSRP--ALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSA  163 (507)
Q Consensus        86 ~~il~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~  163 (507)
                      ++|+.+..+.|.++.  .......  ..+...++...|+.||++|.. ++|.|+..+++.+.+++++..+++++.+.+..
T Consensus        88 k~I~ik~F~~F~~r~~~~~~d~~~--~l~~~~Lf~~~g~~WK~lR~~-lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~  164 (499)
T KOG0158|consen   88 KEILIKDFDNFYNRKRPIYGDPED--PLSALNLFFLRGERWKRLRTK-LSPTFTSGKLKKMFPTMEEVGDELVRHLRRKS  164 (499)
T ss_pred             HHHHHHhCccCcCCCCCCcCCCCC--cccccCchhccCchHHHHHHh-hccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999988888854  2221111  112345677789999999999 78999999999999999999999999998764


Q ss_pred             hcCCcccHHHHHHHHHHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHh-ccccc----cccccchhhhhhhhhhHH
Q 035827          164 AASKQVNLSEIMMSLSCNIICRLGFGKRSGDESETITERSRFHTLLNEIQAL-SIGFF----VTDYFPFMGWIDKLTGMI  238 (507)
Q Consensus       164 ~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~  238 (507)
                      ..+..+++.+.+..+|.|||++++||.+.++..+..   ..|...-...... ...+.    ....+|.+....   ...
T Consensus       165 ~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~---~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l---~~~  238 (499)
T KOG0158|consen  165 EGGQEGEIKDLCARYTTDVIGSCAFGLDANSLRDPK---AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL---RVK  238 (499)
T ss_pred             cccCCccHHHHHHHHHHHHHhHhhcccchhhhcCch---HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh---hcc
Confidence            433678999999999999999999999998875332   2333222222211 11111    111222221110   011


Q ss_pred             HHHHHHHHhhHHHHHHHHHhhccccccccccccchHHHHHHHhhhh--cCC-cc-cCCHHHHHHHHHHHHHhcccchHHH
Q 035827          239 RRLENNFQESDRFYQELIDEHLDPKRTKAKVQQEDLVDVLLQIRKD--HGF-KV-DLTLDHIKAVLMNIFVAGTDTSAAT  314 (507)
Q Consensus       239 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~-~~-~l~~~~i~~~~~~~~~Ag~~tt~~~  314 (507)
                      ........-..+.+...++.|.+.   +  ..+.|+++.++++..+  .+. .. .++.+||+++++.|++||.||||++
T Consensus       239 ~~~~~~~~~~~~~v~~~v~~R~~~---~--~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~t  313 (499)
T KOG0158|consen  239 LFPEDVTDFFRKLVNSRVEQREKE---N--IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTAST  313 (499)
T ss_pred             cChHHHHHHHHHHHHHHHHHHHhc---C--CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHH
Confidence            111222233344445555555111   1  2688999999998853  111 11 5999999999999999999999999


Q ss_pred             HHHHHHHHHhCchHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCcccc-ccccCC
Q 035827          315 LVWAMTYLMKHPRVMKKVQEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTID-GYEIPA  393 (507)
Q Consensus       315 l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~-g~~ip~  393 (507)
                      +++++|+||+||++|+|||+||+++..+..+ +|+|.+.+|+||++||+||||+||+++. +-|.+++|.+++ ++.|||
T Consensus       314 lsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~-ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~k  391 (499)
T KOG0158|consen  314 LSFALYELAKNPDVQDKLREEIDEVLEEKEG-LTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPK  391 (499)
T ss_pred             HHHHHHHHhcChHHHHHHHHHHHHHhcccCC-CCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCC
Confidence            9999999999999999999999999776534 9999999999999999999999999999 779999999999 999999


Q ss_pred             CCEEEEehhhhcCCCCCCCCCCCCCCCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCC
Q 035827          394 KTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPP  473 (507)
Q Consensus       394 g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~  473 (507)
                      |+.|.++++++||||++||||++|+||||.+++.. ..++.+|+|||.|||.|+|.+||++|+|+.|+.||++|+++..+
T Consensus       392 G~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~  470 (499)
T KOG0158|consen  392 GTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP  470 (499)
T ss_pred             CCEEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC
Confidence            99999999999999999999999999999987654 44778999999999999999999999999999999999999987


Q ss_pred             CCCCCCCCcccccceeeeeccceEEEeeecC
Q 035827          474 GMKNQDLDFDVLAGIAVHKKNYLFLLAKDHE  504 (507)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  504 (507)
                      ... .+ ......+.+..|++++++++.+|.
T Consensus       471 ~t~-~~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  471 TTI-IP-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ccc-Cc-ccCCccceeeecCCceEEEEEeCC
Confidence            332 22 222234788999999999999984


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.4e-81  Score=619.41  Aligned_cols=471  Identities=27%  Similarity=0.503  Sum_probs=369.0

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCCC-chhHHHHHHhcC-CcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchhh
Q 035827           27 KKIKLPPGPQGLPFIGNLHQFDVSKP-HVSFWELSKKYG-PLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALVV  104 (507)
Q Consensus        27 ~~~~~~pgp~~~p~~G~~~~~~~~~~-~~~~~~~~~~yG-~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~~  104 (507)
                      ++.+.||||+++|++||++.+..+.+ +.++.+|.++|| +++++++|+.++|+|+||+.+++++.+++..|.+++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            45679999999999999987743333 567889999999 8999999999999999999999999998888888875433


Q ss_pred             hhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHH
Q 035827          105 TQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIIC  184 (507)
Q Consensus       105 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~  184 (507)
                      ...++.+..+++++.+|+.|+++||++..+.++...++.+.+.++++++.+++.+.+...+++++|+.+.+..+++++++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            32233222346788889999999999666777777777888999999999988887644455679999999999999999


Q ss_pred             HHhhCCCCCCCCc--chhHHHHHHHHHHHHHHhc---cccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhh
Q 035827          185 RLGFGKRSGDESE--TITERSRFHTLLNEIQALS---IGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEH  259 (507)
Q Consensus       185 ~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  259 (507)
                      +++||.++.....  +.....++...+..+....   ....+.+++|+++++. +.+..+......+.+.+++...++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998743210  0001111222223222211   1122345566655442 12333445555667788888888887


Q ss_pred             ccccccccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHh
Q 035827          260 LDPKRTKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSL  339 (507)
Q Consensus       260 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~  339 (507)
                      ++..+++......|+++.|++..++.+ ...+++++|++++.++++||+|||+++++|++++|+.||++|+|+|+||+++
T Consensus       293 ~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v  371 (543)
T PLN02971        293 IKMWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRV  371 (543)
T ss_pred             HHHHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            653322111134699999998654322 1248999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCCCCC
Q 035827          340 VGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNP  419 (507)
Q Consensus       340 ~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P  419 (507)
                      ++.+ +.++++++.+|||++|||+|+||++|++|..++|.+.+|++++||.|||||.|.++++++||||++|+||++|+|
T Consensus       372 ~g~~-~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~P  450 (543)
T PLN02971        372 VGKE-RFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKP  450 (543)
T ss_pred             hCCC-CCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCc
Confidence            9764 789999999999999999999999999998789999999999999999999999999999999999999999999


Q ss_pred             CccccCCcC--ccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceE
Q 035827          420 ERFIDRSID--FKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLF  497 (507)
Q Consensus       420 ~R~~~~~~~--~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (507)
                      |||++++..  ...+++.++|||+|+|+|+|++||++|+++++++|+++|+|++.++..  ..+....++ +...++++.
T Consensus       451 eRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~-~~~~~~~~~  527 (543)
T PLN02971        451 ERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSET--RVELMESSH-DMFLSKPLV  527 (543)
T ss_pred             ccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCC--CcchhhhcC-cccccccce
Confidence            999975422  123456899999999999999999999999999999999999876542  234444556 654556999


Q ss_pred             EEeeec
Q 035827          498 LLAKDH  503 (507)
Q Consensus       498 v~~~~r  503 (507)
                      +.+++|
T Consensus       528 ~~~~~~  533 (543)
T PLN02971        528 MVGELR  533 (543)
T ss_pred             eeeeec
Confidence            999988


No 5  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=2.7e-81  Score=614.12  Aligned_cols=484  Identities=44%  Similarity=0.851  Sum_probs=376.1

Q ss_pred             HHHHHHhhccccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcC
Q 035827           14 ICLFLFSVNTYQQKKIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHD   93 (507)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~   93 (507)
                      +++.++.+....+++.+.||||+++|++||++.+...+++.++.+|+++||++|++++|+.++|+++||+.+++++.++.
T Consensus        13 ~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~   92 (502)
T PLN02966         13 AVLLFFLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQD   92 (502)
T ss_pred             HHHHHHHHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCc
Confidence            33333444445555667899999999999998875557889999999999999999999999999999999999999877


Q ss_pred             cccCCCCchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHH
Q 035827           94 LQFSSRPALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSE  173 (507)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~  173 (507)
                      ..|.+++..........+..+..++.+|+.|+++|+.++.+.|+..+++.+.+.+.+.++.+++.+.+...+++++|+.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~  172 (502)
T PLN02966         93 VNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISE  172 (502)
T ss_pred             ccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHH
Confidence            66665543222222222222344566799999999997788999999999999999999999999976555566899999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHH
Q 035827          174 IMMSLSCNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQ  253 (507)
Q Consensus       174 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~  253 (507)
                      ++..+++|+++.++||.+++...   .....+.+.+...........+..++|++.++..+....+..........++++
T Consensus       173 ~~~~~t~dvi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (502)
T PLN02966        173 LMLTFTNSVVCRQAFGKKYNEDG---EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQ  249 (502)
T ss_pred             HHHHHHHHHHHHHHhCCccCccc---hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999987542   122344444444333333333344555443332222222333344555666677


Q ss_pred             HHHHhhccccccccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHH
Q 035827          254 ELIDEHLDPKRTKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQ  333 (507)
Q Consensus       254 ~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr  333 (507)
                      ..++++.+......  ...|+++.+++..++...+..++++++.++++++++||+|||+++++|++++|++||++|+|++
T Consensus       250 ~~i~~~~~~~~~~~--~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~  327 (502)
T PLN02966        250 EVVNETLDPKRVKP--ETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQ  327 (502)
T ss_pred             HHHHHHHhcccccc--ccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHH
Confidence            77766543321111  3468999999776543223458999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCC-CCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCC-
Q 035827          334 EEIRSLVGGK-KSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAW-  411 (507)
Q Consensus       334 ~Ei~~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-  411 (507)
                      +|++++++.. ++.++++++.+|||++|||+|++|++|++|..++|.+.+|++++||.||+||.|.++++++||||++| 
T Consensus       328 ~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g  407 (502)
T PLN02966        328 AEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWG  407 (502)
T ss_pred             HHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCccccc
Confidence            9999998753 24689999999999999999999999999987789999999999999999999999999999999999 


Q ss_pred             CCCCCCCCCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeee
Q 035827          412 ENPEEFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVH  491 (507)
Q Consensus       412 ~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~  491 (507)
                      +||++|+||||++++......+..++|||+|+|+|+|++||++|+++++|.|+++|+|++.++.+++.++.+...|++..
T Consensus       408 ~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~  487 (502)
T PLN02966        408 PNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMH  487 (502)
T ss_pred             CChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeec
Confidence            99999999999975433223456899999999999999999999999999999999999988765555666666776664


Q ss_pred             eccceEEEeee
Q 035827          492 KKNYLFLLAKD  502 (507)
Q Consensus       492 ~~~~~~v~~~~  502 (507)
                      ++.++.+..++
T Consensus       488 ~~~~~~~~~~~  498 (502)
T PLN02966        488 KSQHLKLVPEK  498 (502)
T ss_pred             cCCCeEEEEEe
Confidence            55455544443


No 6  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.2e-81  Score=615.04  Aligned_cols=470  Identities=39%  Similarity=0.781  Sum_probs=374.3

Q ss_pred             ccccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCc
Q 035827           22 NTYQQKKIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPA  101 (507)
Q Consensus        22 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~  101 (507)
                      +++.+++.+.||||+++|++|+++.+ ....+..+.+|+++||++|++++|+.++|+++||+.+++++.++...|+.++.
T Consensus        28 ~~~~~~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~  106 (516)
T PLN02183         28 ISRLRRRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPA  106 (516)
T ss_pred             HhhccCCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCc
Confidence            44555567899999999999998776 44567789999999999999999999999999999999999988777777765


Q ss_pred             hhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHH
Q 035827          102 LVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCN  181 (507)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~  181 (507)
                      .........++.+++++.+|+.|+++||+++.++|+.+.++.+.+.+ ++++.+++++..  ..++++|+.+++..+++|
T Consensus       107 ~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~  183 (516)
T PLN02183        107 NIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSS--NIGKPVNIGELIFTLTRN  183 (516)
T ss_pred             ccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHh--cCCCcEeHHHHHHHHHHH
Confidence            43322232223456788889999999999667899999999988864 678999999864  246689999999999999


Q ss_pred             HHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhcc
Q 035827          182 IICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLD  261 (507)
Q Consensus       182 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (507)
                      +++.++||.+++.      ....+.+.+..+............+|++.++.. ....++..+..+.+.+++...++++++
T Consensus       184 vi~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~  256 (516)
T PLN02183        184 ITYRAAFGSSSNE------GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQ  256 (516)
T ss_pred             HHHhHhhcCcccc------hHHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987753      223455555555444333334456676654421 123445556677788888888877654


Q ss_pred             ccccc-----cccccchHHHHHHHhhhhcC---------CcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCch
Q 035827          262 PKRTK-----AKVQQEDLVDVLLQIRKDHG---------FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPR  327 (507)
Q Consensus       262 ~~~~~-----~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~  327 (507)
                      +...+     ......|+++.++++..+..         ....++++++++++.++++||+|||+++++|++++|++||+
T Consensus       257 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pe  336 (516)
T PLN02183        257 KRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPE  336 (516)
T ss_pred             hhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHH
Confidence            32211     11134689999998653311         11258999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCC
Q 035827          328 VMKKVQEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRD  407 (507)
Q Consensus       328 ~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d  407 (507)
                      +|+|+++|++++++.+ +.++.+++.+||||+|||+|++|++|++|+. .|.+.+|++++||.|||||.|.++.+++|||
T Consensus       337 vq~kl~~Ei~~v~~~~-~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd  414 (516)
T PLN02183        337 DLKRVQQELADVVGLN-RRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRD  414 (516)
T ss_pred             HHHHHHHHHHHHcCCC-CCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCC
Confidence            9999999999999754 6789999999999999999999999999985 5999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccccCCcC-ccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCccccc
Q 035827          408 PEAWENPEEFNPERFIDRSID-FKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLA  486 (507)
Q Consensus       408 ~~~~~~p~~F~P~R~~~~~~~-~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~  486 (507)
                      |++|+||++|+||||++++.. ...+.+.|+|||+|+|+|+|++||++|+++++|.|+++|++++.++..+..++....+
T Consensus       415 ~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~  494 (516)
T PLN02183        415 KNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVF  494 (516)
T ss_pred             ccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcc
Confidence            999999999999999975432 2234568999999999999999999999999999999999998776533334554556


Q ss_pred             ceeeeeccceEEEeeecC
Q 035827          487 GIAVHKKNYLFLLAKDHE  504 (507)
Q Consensus       487 ~~~~~~~~~~~v~~~~r~  504 (507)
                      +.+..+.+++.+.+++|-
T Consensus       495 ~~~~~~~~~~~~~~~~r~  512 (516)
T PLN02183        495 GLTAPRATRLVAVPTYRL  512 (516)
T ss_pred             ccccccCCCcEEEeecCC
Confidence            666556668888888773


No 7  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.4e-80  Score=610.77  Aligned_cols=470  Identities=39%  Similarity=0.745  Sum_probs=381.8

Q ss_pred             CCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchhhhhh
Q 035827           28 KIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALVVTQK  107 (507)
Q Consensus        28 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~~~~~  107 (507)
                      +.+.||||+++|++||++.+ ..+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|.+++.......
T Consensus        32 ~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~  110 (517)
T PLN02687         32 KRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH  110 (517)
T ss_pred             CCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence            45679999999999999887 45688999999999999999999999999999999999999987777887765443333


Q ss_pred             hhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHHHHh
Q 035827          108 LSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIICRLG  187 (507)
Q Consensus       108 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~  187 (507)
                      +...+.+++++.+|+.|+++||.+..+.|+.+.++.+.+.++++++.+++.+.... +++++|+.+++..+++|+++.++
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~~  189 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRAM  189 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHH
Confidence            33334567788789999999999544789999999999999999999999997642 45679999999999999999999


Q ss_pred             hCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhcccccccc
Q 035827          188 FGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLDPKRTKA  267 (507)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  267 (507)
                      ||.++...... .....+.+....+............+|++.|+.. ....++..+..+.+.+++...++++++......
T Consensus       190 fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~  267 (517)
T PLN02687        190 VGRRVFAGDGD-EKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGS  267 (517)
T ss_pred             hCccccccCCc-chHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence            99997643211 1334566665555543332223345665554421 123345556677788888999988876543211


Q ss_pred             ccccchHHHHHHHhhhhc---CCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhCCCC
Q 035827          268 KVQQEDLVDVLLQIRKDH---GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVGGKK  344 (507)
Q Consensus       268 ~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~  344 (507)
                       ....|+++.+++...+.   +.+..++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++++.. 
T Consensus       268 -~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-  345 (517)
T PLN02687        268 -EEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD-  345 (517)
T ss_pred             -cccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC-
Confidence             14569999999875432   1123699999999999999999999999999999999999999999999999998765 


Q ss_pred             CCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCCCCCCcccc
Q 035827          345 SFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFID  424 (507)
Q Consensus       345 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~  424 (507)
                      +.++.+++.+||||+|||+|++|++|+++..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||++
T Consensus       346 ~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~  425 (517)
T PLN02687        346 RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLP  425 (517)
T ss_pred             CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCC
Confidence            67899999999999999999999999999878999999999999999999999999999999999999999999999997


Q ss_pred             CCcC----ccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEEEe
Q 035827          425 RSID----FKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFLLA  500 (507)
Q Consensus       425 ~~~~----~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  500 (507)
                      ++..    ....+..++|||+|+|+|+|++||++|+++++++|+++|+|++.++..++++.....+++++.+..++.+++
T Consensus       426 ~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (517)
T PLN02687        426 GGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHP  505 (517)
T ss_pred             CCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEee
Confidence            5321    122456899999999999999999999999999999999999987644333444445677777777888888


Q ss_pred             eec
Q 035827          501 KDH  503 (507)
Q Consensus       501 ~~r  503 (507)
                      ++|
T Consensus       506 ~~R  508 (517)
T PLN02687        506 RPR  508 (517)
T ss_pred             ccC
Confidence            887


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=8e-80  Score=606.70  Aligned_cols=485  Identities=35%  Similarity=0.636  Sum_probs=385.2

Q ss_pred             HHHhhccccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCccc
Q 035827           17 FLFSVNTYQQKKIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQF   96 (507)
Q Consensus        17 ~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~   96 (507)
                      ++++.+++.+++.+.||||+++|++||+..+ ..+++.++.+++++||++|++++|+.+.|+++||+.+++++.++...|
T Consensus        19 ~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f   97 (514)
T PLN03112         19 IWRWLNASMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVF   97 (514)
T ss_pred             HHHHccccccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCccc
Confidence            3333444555577899999999999999887 567888999999999999999999999999999999999998887778


Q ss_pred             CCCCchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHH
Q 035827           97 SSRPALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMM  176 (507)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~  176 (507)
                      +.++.........++....+++.+|+.|+++||.+..+.|+.++++.+.+.+.++++.+++.+.+...+++++|+.+.+.
T Consensus        98 ~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~  177 (514)
T PLN03112         98 ASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLG  177 (514)
T ss_pred             ccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHH
Confidence            77665422211122223456677899999999997677899999999999999999999998876544567899999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCcc-hhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHH
Q 035827          177 SLSCNIICRLGFGKRSGDESET-ITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQEL  255 (507)
Q Consensus       177 ~~~~~~i~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (507)
                      .+++++++.++||.++....+. ......+......+........+..++|++.++.. ....++..+....+.++++..
T Consensus       178 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  256 (514)
T PLN03112        178 AFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREVEKRVDEFHDKI  256 (514)
T ss_pred             HHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987543221 12334455555555443322233445565554321 123345555666777788888


Q ss_pred             HHhhcccccccc-ccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHH
Q 035827          256 IDEHLDPKRTKA-KVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQE  334 (507)
Q Consensus       256 i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~  334 (507)
                      ++++++...... .....|+++.++++..+++ +..+++++|.+++.++++||+|||+++++|++++|++||++|+++++
T Consensus       257 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~  335 (514)
T PLN03112        257 IDEHRRARSGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQE  335 (514)
T ss_pred             HHHHHHhhcccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHH
Confidence            877665432211 1134699999998654332 22589999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCC
Q 035827          335 EIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENP  414 (507)
Q Consensus       335 Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p  414 (507)
                      |++++++++ +.++++++.+|||++|||+|++|++|++++.++|.+.+|++++||.|||||.|.++++++||||++|+||
T Consensus       336 Ei~~~~~~~-~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP  414 (514)
T PLN03112        336 ELDSVVGRN-RMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDV  414 (514)
T ss_pred             HHHHhcCCC-CcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCCh
Confidence            999998765 6789999999999999999999999999987789999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCc---C-ccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceee
Q 035827          415 EEFNPERFIDRSI---D-FKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAV  490 (507)
Q Consensus       415 ~~F~P~R~~~~~~---~-~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~  490 (507)
                      ++||||||.++..   . .....+.++|||+|+|+|||++||++|++++++.|+++|+|++.++...++++....++++.
T Consensus       415 ~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  494 (514)
T PLN03112        415 EEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTM  494 (514)
T ss_pred             hhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCccc
Confidence            9999999865321   1 11234689999999999999999999999999999999999987654334455555667787


Q ss_pred             eeccceEEEeeecCC
Q 035827          491 HKKNYLFLLAKDHEY  505 (507)
Q Consensus       491 ~~~~~~~v~~~~r~~  505 (507)
                      .+++++.++++||-.
T Consensus       495 ~~~~~~~~~~~~r~~  509 (514)
T PLN03112        495 PKAKPLRAVATPRLA  509 (514)
T ss_pred             ccCCCeEEEeecCCc
Confidence            888899999999853


No 9  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.3e-79  Score=599.83  Aligned_cols=470  Identities=34%  Similarity=0.676  Sum_probs=379.8

Q ss_pred             ccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchh
Q 035827           24 YQQKKIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALV  103 (507)
Q Consensus        24 ~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~  103 (507)
                      ..+++.+.||||+++|++|+++.+ ..+++.++.+++++||+++++++|+.++|+++||+.+++++.++...|.+++...
T Consensus        25 ~~~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~  103 (504)
T PLN00110         25 LPKPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNA  103 (504)
T ss_pred             hhcccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence            344567889999999999998777 4567889999999999999999999999999999999999998877788777543


Q ss_pred             hhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHH
Q 035827          104 VTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNII  183 (507)
Q Consensus       104 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i  183 (507)
                      .......++.+.+++.+|+.|+++|+.+....|+.+.++.+.+.+.++++.+++.+.+...+++++|+.+++..+++|++
T Consensus       104 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi  183 (504)
T PLN00110        104 GATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMI  183 (504)
T ss_pred             chhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHH
Confidence            32222223345677888999999999965568999999999999999999999998765556678999999999999999


Q ss_pred             HHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhcccc
Q 035827          184 CRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLDPK  263 (507)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (507)
                      +.++||.++....  ....+++...+...........+...+|++.|+. .....+...+..+.+.++++..++++++..
T Consensus       184 ~~~~fg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  260 (504)
T PLN00110        184 GQVILSRRVFETK--GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMD-IQGIERGMKHLHKKFDKLLTRMIEEHTASA  260 (504)
T ss_pred             HHHHhCCcccccC--chhHHHHHHHHHHHHHHhccccHHHHcchHhhhC-cchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999873211  1133456666665544333333345566655432 122334555566777788888888766543


Q ss_pred             ccccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhCCC
Q 035827          264 RTKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVGGK  343 (507)
Q Consensus       264 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~  343 (507)
                      ....  ...|+++.+++...... +..++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++++..
T Consensus       261 ~~~~--~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  337 (504)
T PLN00110        261 HERK--GNPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRN  337 (504)
T ss_pred             cccc--cCCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence            2211  34689999997543221 23699999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCCCCCCccc
Q 035827          344 KSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI  423 (507)
Q Consensus       344 ~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~  423 (507)
                       +.++++++++|||++|||+||+|++|+++..++|.+.+|++++||.||+||.|.++++++|+||++|+||++|+||||+
T Consensus       338 -~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl  416 (504)
T PLN00110        338 -RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFL  416 (504)
T ss_pred             -CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCccccc
Confidence             6789999999999999999999999999987899999999999999999999999999999999999999999999999


Q ss_pred             cCCcCcc---CCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEEEe
Q 035827          424 DRSIDFK---GQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFLLA  500 (507)
Q Consensus       424 ~~~~~~~---~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  500 (507)
                      +++....   .....++|||+|+|.|+|++||++|+++++++|+++|+|++.++.   ++......+++..|+.++++++
T Consensus       417 ~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  493 (504)
T PLN00110        417 SEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMV  493 (504)
T ss_pred             CCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceEee
Confidence            6542211   123579999999999999999999999999999999999987653   2334445678888999999999


Q ss_pred             eecC
Q 035827          501 KDHE  504 (507)
Q Consensus       501 ~~r~  504 (507)
                      ++|.
T Consensus       494 ~~r~  497 (504)
T PLN00110        494 TPRL  497 (504)
T ss_pred             ccCC
Confidence            9884


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.4e-78  Score=596.83  Aligned_cols=470  Identities=26%  Similarity=0.459  Sum_probs=369.0

Q ss_pred             CCCCCCCCCCCCCcccccccCCC--CCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchh
Q 035827           26 QKKIKLPPGPQGLPFIGNLHQFD--VSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALV  103 (507)
Q Consensus        26 ~~~~~~~pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~  103 (507)
                      ++..+.||||+++|++||++.+.  ..+++..+.+|+++||++|++++|+.+.|+++||+++++++.++...|..++...
T Consensus        31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            44677899999999999987652  2346788999999999999999999999999999999999998888888777643


Q ss_pred             hhhhhhcCCcceEE-cCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHH
Q 035827          104 VTQKLSYNGLDLVF-SPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNI  182 (507)
Q Consensus       104 ~~~~~~~~~~~~~~-~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~  182 (507)
                      ....++. +.+.+. ..+|+.|+++||.++.+.|+.+.++.+.+.+.++++.+++.+.+....++.+|+.+.+..++.++
T Consensus       111 ~~~~~~~-~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~i  189 (519)
T PLN00168        111 SSRLLGE-SDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCL  189 (519)
T ss_pred             chhhhcc-CCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence            3222322 222333 36799999999866889999999999999999999999999976544445689999999999999


Q ss_pred             HHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhc-cccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhcc
Q 035827          183 ICRLGFGKRSGDESETITERSRFHTLLNEIQALS-IGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLD  261 (507)
Q Consensus       183 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (507)
                      ++.++||.+++..     ....+......+.... ....+...+|++.+.. .....++..+..+.+.+++...++++++
T Consensus       190 i~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (519)
T PLN00168        190 LVLMCFGERLDEP-----AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL-FRGRLQKALALRRRQKELFVPLIDARRE  263 (519)
T ss_pred             HHHHHcCCCcChh-----hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988631     1222323222221111 1122334455432211 1122344556677888888888887765


Q ss_pred             ccc---ccc--c----cccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHH
Q 035827          262 PKR---TKA--K----VQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKV  332 (507)
Q Consensus       262 ~~~---~~~--~----~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~l  332 (507)
                      ...   ++.  .    ....|+++.|++.......+..+++++|.++++++++||+|||+++++|++++|++||++|+|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl  343 (519)
T PLN00168        264 YKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKL  343 (519)
T ss_pred             HhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHH
Confidence            321   000  0    0145899999976532221235999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCC
Q 035827          333 QEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWE  412 (507)
Q Consensus       333 r~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~  412 (507)
                      ++|++++++++.+.++.+++.+||||+|||+|++|++|+++..++|.+.+|++++||.|||||.|.++++++||||++|+
T Consensus       344 ~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~  423 (519)
T PLN00168        344 HDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWE  423 (519)
T ss_pred             HHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccC
Confidence            99999999765467899999999999999999999999999878999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCcC-----ccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccc
Q 035827          413 NPEEFNPERFIDRSID-----FKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAG  487 (507)
Q Consensus       413 ~p~~F~P~R~~~~~~~-----~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~  487 (507)
                      ||++|+||||++++..     ...+++.++|||+|+|+|||++||++|++++++.|+++|+|++.++..   ++.....+
T Consensus       424 ~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~  500 (519)
T PLN00168        424 RPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDFAEKRE  500 (519)
T ss_pred             CccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CChhhhce
Confidence            9999999999974211     112346899999999999999999999999999999999999876532   23333345


Q ss_pred             eeeeeccceEEEeeecCC
Q 035827          488 IAVHKKNYLFLLAKDHEY  505 (507)
Q Consensus       488 ~~~~~~~~~~v~~~~r~~  505 (507)
                      ++..+++++.|++++|+.
T Consensus       501 ~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        501 FTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             eEEeecCCcEEEEEeccC
Confidence            677788899999999874


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=9.5e-79  Score=594.80  Aligned_cols=478  Identities=25%  Similarity=0.415  Sum_probs=372.7

Q ss_pred             HHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHH
Q 035827            4 LVIIILLSLPICLFLFSVNTYQQKKIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAK   83 (507)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~   83 (507)
                      ++.+++++++.|++...+.++.+.+.+.+|||+++|++||++.+ ..+++..+.+++++||++|++++|+.+.|+++||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~   81 (482)
T PTZ00404          3 LFNIILFLFIFYIIHNAYKKYKKIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPI   81 (482)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHH
Confidence            44555666666666556666666778899999999999999887 45788999999999999999999999999999999


Q ss_pred             HHHHHHHhcCcccCCCCchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhh
Q 035827           84 MAKETLKTHDLQFSSRPALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSA  163 (507)
Q Consensus        84 ~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~  163 (507)
                      .+++++.++...|..++......... .+.+ +++.+|+.|+++|++ +.+.|+.+.++.+.+.+.+.++.+++.+.+..
T Consensus        82 ~~~~il~~~~~~~~~r~~~~~~~~~~-~~~~-l~~~~g~~w~~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~  158 (482)
T PTZ00404         82 LIREMFVDNFDNFSDRPKIPSIKHGT-FYHG-IVTSSGEYWKRNREI-VGKAMRKTNLKHIYDLLDDQVDVLIESMKKIE  158 (482)
T ss_pred             HHHHHHHhcchhhcCCCCcceeeeec-cCCc-eeccChHHHHHHHHH-HHHHHhhhccccHHHHHHHHHHHHHHHHHHHH
Confidence            99999998766666555432221111 1334 455689999999999 67999999999999999999999999997654


Q ss_pred             hcCCcccHHHHHHHHHHHHHHHHhhCCCCCCCCcc-hhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHH
Q 035827          164 AASKQVNLSEIMMSLSCNIICRLGFGKRSGDESET-ITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLE  242 (507)
Q Consensus       164 ~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~  242 (507)
                      +.++.+|+.+++..+++|+++.++||.+++..++. ......+.+.+..+........+...++++..+  +........
T Consensus       159 ~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  236 (482)
T PTZ00404        159 SSGETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL--YYQYLEHTD  236 (482)
T ss_pred             hcCCccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh--hHHHHHHHH
Confidence            45667999999999999999999999988753211 112244555555544332221122222222211  011122233


Q ss_pred             HHHHhhHHHHHHHHHhhccccccccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Q 035827          243 NNFQESDRFYQELIDEHLDPKRTKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYL  322 (507)
Q Consensus       243 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L  322 (507)
                      +....+.+++++.++++++..+. .  ...|+++.++++..+.   .+.+.++|++++.++++||+|||+++++|++++|
T Consensus       237 ~~~~~~~~~~~~~i~~~~~~~~~-~--~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L  310 (482)
T PTZ00404        237 KNFKKIKKFIKEKYHEHLKTIDP-E--VPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLML  310 (482)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCC-C--CcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence            45566777777777665543221 1  3568999999864321   1233456899999999999999999999999999


Q ss_pred             HhCchHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccc-cccccCCCCEEEEeh
Q 035827          323 MKHPRVMKKVQEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTI-DGYEIPAKTLVYVNA  401 (507)
Q Consensus       323 ~~~P~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~  401 (507)
                      ++||++|+||++|++++++++ +.++++++.+|||++|||+|+||++|++|..++|.+.+|+++ +||.|||||.|.++.
T Consensus       311 ~~~P~vq~kl~~Ei~~v~~~~-~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~  389 (482)
T PTZ00404        311 CNYPEIQEKAYNEIKSTVNGR-NKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINY  389 (482)
T ss_pred             HcCcHHHHHHHHHHHHHhcCC-CCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeH
Confidence            999999999999999999865 568999999999999999999999999997678999999999 999999999999999


Q ss_pred             hhhcCCCCCCCCCCCCCCCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCC
Q 035827          402 WAIGRDPEAWENPEEFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLD  481 (507)
Q Consensus       402 ~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~  481 (507)
                      +++||||++|+||++|+||||+++.     .+..++|||+|+|+|||++||++|++++++.|+++|+|+..++.+   .+
T Consensus       390 ~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~  461 (482)
T PTZ00404        390 YSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---ID  461 (482)
T ss_pred             HHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CC
Confidence            9999999999999999999998642     356899999999999999999999999999999999999865532   22


Q ss_pred             cccccceeeeeccceEEEeeec
Q 035827          482 FDVLAGIAVHKKNYLFLLAKDH  503 (507)
Q Consensus       482 ~~~~~~~~~~~~~~~~v~~~~r  503 (507)
                      .....+++..| .+++|++++|
T Consensus       462 ~~~~~~~~~~~-~~~~v~~~~R  482 (482)
T PTZ00404        462 ETEEYGLTLKP-NKFKVLLEKR  482 (482)
T ss_pred             cccccceeecC-CCceeeeecC
Confidence            23345666764 5899999876


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.9e-78  Score=592.96  Aligned_cols=473  Identities=32%  Similarity=0.581  Sum_probs=361.4

Q ss_pred             hccccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCC
Q 035827           21 VNTYQQKKIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRP  100 (507)
Q Consensus        21 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~  100 (507)
                      ..+...++.+.||||+++|++|+++.+.....+..+.+|+++||++|++++|+++.|+++||+.+++++.++...|.+++
T Consensus        21 ~~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~  100 (503)
T PLN02394         21 VSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRT  100 (503)
T ss_pred             HHHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCC
Confidence            34445567889999999999999987733335788999999999999999999999999999999999988776677665


Q ss_pred             chhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhh-cCCcccHHHHHHHHH
Q 035827          101 ALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAA-ASKQVNLSEIMMSLS  179 (507)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~  179 (507)
                      .......+...+.+.+++.+|+.|+++||.+..++|+.+.++.+.+.++++++.+++++.+... .++.+|+.+++..++
T Consensus       101 ~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~  180 (503)
T PLN02394        101 RNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMM  180 (503)
T ss_pred             CcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHH
Confidence            4433333433345677888899999999995568999999999999999999999999976432 234689999999999


Q ss_pred             HHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccc--cccccccchhhhhhhhhhHHHHHHHHHHhhHH-HHHHHH
Q 035827          180 CNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIG--FFVTDYFPFMGWIDKLTGMIRRLENNFQESDR-FYQELI  256 (507)
Q Consensus       180 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~i  256 (507)
                      +|+++.++||.+++...+.  ....+.............  ..+..++|++...  +....+..........+ +.+..+
T Consensus       181 ~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i  256 (503)
T PLN02394        181 YNIMYRMMFDRRFESEDDP--LFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFV  256 (503)
T ss_pred             HHHHHHHHhCCCcccccch--hHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998753211  122222222222221111  1122334443321  11111222222222222 333445


Q ss_pred             Hhhccccccc--cccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHH
Q 035827          257 DEHLDPKRTK--AKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQE  334 (507)
Q Consensus       257 ~~~~~~~~~~--~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~  334 (507)
                      +++++.....  ......|+++.|+++..+    +.++++++..++.++++||+|||+++++|++++|++||++|+|||+
T Consensus       257 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~  332 (503)
T PLN02394        257 DERKKLMSAKGMDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRD  332 (503)
T ss_pred             HHHHHHhhhccCCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            5554322110  111346899999986543    2589999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCC
Q 035827          335 EIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENP  414 (507)
Q Consensus       335 Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p  414 (507)
                      |++++++.+ +.++++++.+||||+|||+|++|++|++|+..+|.+.+|++++||.||+||.|.++++++||||++|+||
T Consensus       333 Ei~~v~~~~-~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P  411 (503)
T PLN02394        333 ELDTVLGPG-NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNP  411 (503)
T ss_pred             HHHHHhCCC-CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCc
Confidence            999999754 5689999999999999999999999999998889999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCcC--ccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccc-eeee
Q 035827          415 EEFNPERFIDRSID--FKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAG-IAVH  491 (507)
Q Consensus       415 ~~F~P~R~~~~~~~--~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~-~~~~  491 (507)
                      ++|+||||++++..  .......++|||+|+|+|||++||++|+++++|.|+++|+|++.++.+  .++....+| +...
T Consensus       412 ~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~  489 (503)
T PLN02394        412 EEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLH  489 (503)
T ss_pred             cccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeec
Confidence            99999999975432  222456899999999999999999999999999999999999876642  233443453 5554


Q ss_pred             eccceEEEeeecC
Q 035827          492 KKNYLFLLAKDHE  504 (507)
Q Consensus       492 ~~~~~~v~~~~r~  504 (507)
                      .+.++.+++.||-
T Consensus       490 ~~~~~~~~~~~r~  502 (503)
T PLN02394        490 IAKHSTVVFKPRS  502 (503)
T ss_pred             cCCCceEEeecCC
Confidence            5569999999984


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.8e-78  Score=585.03  Aligned_cols=456  Identities=29%  Similarity=0.513  Sum_probs=363.5

Q ss_pred             CCCCCCCCCCCcccccccCCCCC--CCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchh-h
Q 035827           28 KIKLPPGPQGLPFIGNLHQFDVS--KPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALV-V  104 (507)
Q Consensus        28 ~~~~~pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~-~  104 (507)
                      +...||||+++|++|++..+...  +...++.++..+||++|+.|+|+.+.|+++||+.+++|+.++...+...+... .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            56789999999999999887433  56677889999999999999999999999999999999976555444444433 2


Q ss_pred             hhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHH
Q 035827          105 TQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIIC  184 (507)
Q Consensus       105 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~  184 (507)
                      ...+.  |.++++.. |+.|+++||+ ..+.|+.+.++.+.+.+.+.+..+...+..... +..+|+.+.+.++++|++|
T Consensus       113 ~~~~l--G~gll~~~-g~~W~~~Rk~-~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPWL--GDGLLFSD-GEKWHKHRKL-LTPAFHFEILKSFVPVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHh--cCccccCC-chHHHHHHhh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHH
Confidence            22232  55566655 9999999999 789999999999999999999988888776432 2339999999999999999


Q ss_pred             HHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccc-hhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhcccc
Q 035827          185 RLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFP-FMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLDPK  263 (507)
Q Consensus       185 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (507)
                      .++||....  ..+.....++..++..+......   ....| +..++..+. ..++..++...+++++++.|++|++..
T Consensus       188 ~~~~G~~~~--~~~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~-~~~~~~~a~~~~~~~~~~iI~~rr~~~  261 (497)
T KOG0157|consen  188 KTAMGPESL--DAEGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLK-SERKLKKARKILHDFLEKIIRERREEL  261 (497)
T ss_pred             HHhcCCccc--cccCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999992221  11122333444555544333222   22334 444443333 678888899999999999999988764


Q ss_pred             ccccc---cccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhh
Q 035827          264 RTKAK---VQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLV  340 (507)
Q Consensus       264 ~~~~~---~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~  340 (507)
                      .+...   ....|+++.+.....     ..+++++|++++.+|++||+||||++++|++++|+.||++|+|+++|+.+++
T Consensus       262 ~~~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~  336 (497)
T KOG0157|consen  262 EKEGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEIL  336 (497)
T ss_pred             HhcCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence            33211   245677775332221     3699999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccc-cccccCCCCEEEEehhhhcCCCCCCC-CCCCCC
Q 035827          341 GGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTI-DGYEIPAKTLVYVNAWAIGRDPEAWE-NPEEFN  418 (507)
Q Consensus       341 ~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F~  418 (507)
                      ++.....+....++|+||++||+||||||||+|. ..|.+.+|+++ +||.||||+.|.++++++|||+++|+ ||++||
T Consensus       337 ~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~  415 (497)
T KOG0157|consen  337 GNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFD  415 (497)
T ss_pred             CCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcC
Confidence            8653333333334699999999999999999998 57999999999 58999999999999999999999996 999999


Q ss_pred             CCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEE
Q 035827          419 PERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFL  498 (507)
Q Consensus       419 P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  498 (507)
                      ||||+++......++++|+|||+|+|.|+|++||++|||++++.++++|+|++..+..     ....+.++++++++++|
T Consensus       416 PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v  490 (497)
T KOG0157|consen  416 PERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKV  490 (497)
T ss_pred             ccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEE
Confidence            9999975443355679999999999999999999999999999999999999877642     44567899999999999


Q ss_pred             EeeecCC
Q 035827          499 LAKDHEY  505 (507)
Q Consensus       499 ~~~~r~~  505 (507)
                      ++++|..
T Consensus       491 ~~~~r~~  497 (497)
T KOG0157|consen  491 KLRPRGS  497 (497)
T ss_pred             EEEeCCC
Confidence            9999863


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.4e-76  Score=575.40  Aligned_cols=458  Identities=26%  Similarity=0.471  Sum_probs=366.6

Q ss_pred             CCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchhhhhhhhcC
Q 035827           32 PPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALVVTQKLSYN  111 (507)
Q Consensus        32 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~  111 (507)
                      ||||+++|++||++++...+++..+.+|+++||++|++++|+++.|+|+||+.+++++.++...|.+++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998875556899999999999999999999999999999999999999887777777644333323322


Q ss_pred             CcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhh--cCCcccHHHHHHHHHHHHHHHHhhC
Q 035827          112 GLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAA--ASKQVNLSEIMMSLSCNIICRLGFG  189 (507)
Q Consensus       112 ~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~~~i~~~~fG  189 (507)
                      +..+.+..+|+.|+++||.+..++++...++.+.+.+++.++.+++.+.+...  .++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22344445699999999987888898888899999999999998888865433  3567999999999999999999999


Q ss_pred             CCCCCCCcc-hh----HHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhccccc
Q 035827          190 KRSGDESET-IT----ERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLDPKR  264 (507)
Q Consensus       190 ~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  264 (507)
                      .+++..... ..    ..+.+......+........+.+.+|+++|+.. ....+...+......++++..++++++...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            987753211 00    112233333444433333334456776665531 122233333344456778888877665433


Q ss_pred             cccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhCCCC
Q 035827          265 TKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVGGKK  344 (507)
Q Consensus       265 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~  344 (507)
                      .+.  ...|+++.+++..      ..++++++.+++.++++||+|||+++++|++++|++||++|+++|+|+++++++. 
T Consensus       240 ~~~--~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-  310 (466)
T PLN02655        240 RGE--ERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDE-  310 (466)
T ss_pred             CCC--CcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC-
Confidence            322  3468999999753      2489999999999999999999999999999999999999999999999999764 


Q ss_pred             CCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCCCCCCcccc
Q 035827          345 SFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFID  424 (507)
Q Consensus       345 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~  424 (507)
                      . ++++++.+||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++
T Consensus       311 ~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~  389 (466)
T PLN02655        311 R-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLG  389 (466)
T ss_pred             C-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCC
Confidence            3 999999999999999999999999999877899999999999999999999999999999999999999999999997


Q ss_pred             CCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEEEeeecC
Q 035827          425 RSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFLLAKDHE  504 (507)
Q Consensus       425 ~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  504 (507)
                      ++... ...+.++|||+|+|.|||++||++|++++++.|+++|+|++.++.. +   .....+++..+++++.+++++|.
T Consensus       390 ~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        390 EKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-E---KEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             CCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-c---ccchhheeEeecCCcEEEEeecC
Confidence            54321 2346899999999999999999999999999999999999876542 1   23356788889999999999886


Q ss_pred             C
Q 035827          505 Y  505 (507)
Q Consensus       505 ~  505 (507)
                      +
T Consensus       465 ~  465 (466)
T PLN02655        465 S  465 (466)
T ss_pred             C
Confidence            5


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.9e-77  Score=540.00  Aligned_cols=458  Identities=24%  Similarity=0.399  Sum_probs=385.0

Q ss_pred             CCCCCCCCCCCCcccccccCC---CCCCCchhHHHHHHhcCCcEEEe-ecCccEEEecCHHHHHHHHHhcCcccCCCC-c
Q 035827           27 KKIKLPPGPQGLPFIGNLHQF---DVSKPHVSFWELSKKYGPLMSLR-LGFVPTLVVSSAKMAKETLKTHDLQFSSRP-A  101 (507)
Q Consensus        27 ~~~~~~pgp~~~p~~G~~~~~---~~~~~~~~~~~~~~~yG~v~~~~-~~~~~~v~v~dp~~i~~il~~~~~~~~~~~-~  101 (507)
                      .+...+|||+++|++|.++.+   ...+.|+...+.+++||+||+.. +|+...|.+.||++++.++++++. ++.++ .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccc
Confidence            366788999999999998733   23567888899999999999999 888999999999999999998874 35553 1


Q ss_pred             ---hhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhh---cCCcccHHHHH
Q 035827          102 ---LVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAA---ASKQVNLSEIM  175 (507)
Q Consensus       102 ---~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~---~~~~vd~~~~~  175 (507)
                         +.... -.+++..++++.+|+.|.+.|..+....+++++++.|.|.+++.+++++..+....+   ...+.|+.+.+
T Consensus       126 ~~~w~~~r-d~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l  204 (519)
T KOG0159|consen  126 IEPWVAYR-DFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQEL  204 (519)
T ss_pred             cchhhhhH-HhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence               11111 222355667778899999999998888899999999999999999999999988765   33567999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCc-chhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHH
Q 035827          176 MSLSCNIICRLGFGKRSGDESE-TITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQE  254 (507)
Q Consensus       176 ~~~~~~~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (507)
                      .+++++.||.++||.+++.+.+ ..++...|.+++..++.......+.  .++++++.  ++.+++..++.+.+.++...
T Consensus       205 ~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~--p~l~r~~~--t~~wk~~~~~~D~i~~~~~~  280 (519)
T KOG0159|consen  205 YRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLM--PSLWRYFP--TKVWKDFVRAWDQIFDVGDK  280 (519)
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhc--chHHHhCC--ChHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999765 3466778888888887655443222  13444443  47789999999999999999


Q ss_pred             HHHhhcccccccccc--ccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHH
Q 035827          255 LIDEHLDPKRTKAKV--QQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKV  332 (507)
Q Consensus       255 ~i~~~~~~~~~~~~~--~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~l  332 (507)
                      +|++..+..+.....  +..+.+..++..       .+++.+++..+++.+++||.||||+++.|++|+|++||++|++|
T Consensus       281 ~Id~~l~~l~~~~~~~~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L  353 (519)
T KOG0159|consen  281 YIDNALEELEKQDSAGSEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRL  353 (519)
T ss_pred             HHHHHHHHHHhccccccchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHH
Confidence            999888776553321  222233333321       26889999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCC
Q 035827          333 QEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWE  412 (507)
Q Consensus       333 r~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~  412 (507)
                      ++|+.+++...+..++.+++.+||||.||||||+||||.+|+ ..|...+|.+++||.|||||.|.++.+.+.+||++|+
T Consensus       354 ~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~  432 (519)
T KOG0159|consen  354 REEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFP  432 (519)
T ss_pred             HHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChhhCC
Confidence            999999998866789999999999999999999999999998 5699999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeee
Q 035827          413 NPEEFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHK  492 (507)
Q Consensus       413 ~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  492 (507)
                      +|++|+||||+.++. ...+++.++|||.|+|+|+|+++|++|+.++||+|+++|+++..+..     ++...+.+++.|
T Consensus       433 ~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~-----pv~~~~~~il~P  506 (519)
T KOG0159|consen  433 DPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE-----PVEYVYRFILVP  506 (519)
T ss_pred             CccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC-----CccceeEEEEcC
Confidence            999999999998764 35588999999999999999999999999999999999999887642     355577889999


Q ss_pred             ccceEEEeeecC
Q 035827          493 KNYLFLLAKDHE  504 (507)
Q Consensus       493 ~~~~~v~~~~r~  504 (507)
                      ..++.+++++|.
T Consensus       507 ~~~l~f~f~~r~  518 (519)
T KOG0159|consen  507 NRPLRFKFRPRN  518 (519)
T ss_pred             CCCcceeeeeCC
Confidence            999999999884


No 16 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=7.5e-77  Score=585.89  Aligned_cols=454  Identities=23%  Similarity=0.392  Sum_probs=354.3

Q ss_pred             CCCCCCCCCCCcccccccCCCC------------------CCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHH
Q 035827           28 KIKLPPGPQGLPFIGNLHQFDV------------------SKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETL   89 (507)
Q Consensus        28 ~~~~~pgp~~~p~~G~~~~~~~------------------~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il   89 (507)
                      ..+.||||+++|++||++.+..                  .+....+.+|+++||++|++++|+.+.|+++||+.+++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            5678999999999999876521                  2233457889999999999999999999999999999999


Q ss_pred             HhcCcccCCCCchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcC-Cc
Q 035827           90 KTHDLQFSSRPALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAAS-KQ  168 (507)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~  168 (507)
                      .++.. +..++...........|.+ ++..+|+.|+++||+ +.+.|+..+++.+.+.+.++++.+++.+.+..+.+ .+
T Consensus       120 ~~~~~-~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKYNT-VTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHI-AAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcCCC-CCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            87633 4444422111111111344 455579999999999 67889999999999999999999999997654333 57


Q ss_pred             ccHHHHHHHHHHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhh
Q 035827          169 VNLSEIMMSLSCNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQES  248 (507)
Q Consensus       169 vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~  248 (507)
                      +|+.+++..+++|+++.++||.+++..+       .+...+..+............+|++.++.  ....+........+
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~~~~~~~~  267 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKGK-------QIFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREIKSLKGEV  267 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccch-------HHHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHHHHHHHHH
Confidence            9999999999999999999999875321       12222222222111111111234443332  12234455566778


Q ss_pred             HHHHHHHHHhhcccccccc-ccccchHHHHHHHhhhhc-CCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCc
Q 035827          249 DRFYQELIDEHLDPKRTKA-KVQQEDLVDVLLQIRKDH-GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHP  326 (507)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P  326 (507)
                      .+++.+.++++++..+.+. .....|+++.++++..+. +.+..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       268 ~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P  347 (516)
T PLN02290        268 ERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNP  347 (516)
T ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCH
Confidence            8888888888765432211 113579999999764422 11224889999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcC
Q 035827          327 RVMKKVQEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGR  406 (507)
Q Consensus       327 ~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~  406 (507)
                      ++|+|+|+|+++++++  +.++++++++||||+|||+||+|++|+++. ++|.+.+|++++||.||+||.|.++.+++||
T Consensus       348 ~vq~kl~~Ei~~v~~~--~~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~r  424 (516)
T PLN02290        348 TWQDKVRAEVAEVCGG--ETPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHH  424 (516)
T ss_pred             HHHHHHHHHHHHHhCC--CCCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcC
Confidence            9999999999999975  378999999999999999999999999996 7899999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccc
Q 035827          407 DPEAW-ENPEEFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVL  485 (507)
Q Consensus       407 d~~~~-~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~  485 (507)
                      ||++| +||++|+||||+++..   .....++|||+|+|+|+|++||++|++++++.|+++|+|++.++.+     ....
T Consensus       425 dp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~~~  496 (516)
T PLN02290        425 SEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HAPV  496 (516)
T ss_pred             ChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cCcc
Confidence            99999 8999999999995421   1335799999999999999999999999999999999999876532     1222


Q ss_pred             cceeeeeccceEEEeeecC
Q 035827          486 AGIAVHKKNYLFLLAKDHE  504 (507)
Q Consensus       486 ~~~~~~~~~~~~v~~~~r~  504 (507)
                      .+++..|+++++|++++|.
T Consensus       497 ~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        497 VVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ceeeecCCCCCeEEEEeCC
Confidence            3578999999999999874


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=5.1e-75  Score=568.08  Aligned_cols=472  Identities=25%  Similarity=0.445  Sum_probs=354.8

Q ss_pred             CCCCCCCCCCCcccccccCCCCCCCc-hhHHHHHHhc-CCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchhhh
Q 035827           28 KIKLPPGPQGLPFIGNLHQFDVSKPH-VSFWELSKKY-GPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALVVT  105 (507)
Q Consensus        28 ~~~~~pgp~~~p~~G~~~~~~~~~~~-~~~~~~~~~y-G~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~~~  105 (507)
                      +.+.||||+++|++||++++...++. .++.++.++| |++|++++|++++|+|+||+.+++++.+++..|+.++.....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            34579999999999999886333333 3466667666 799999999999999999999999999888778888754443


Q ss_pred             hhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHHH
Q 035827          106 QKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIICR  185 (507)
Q Consensus       106 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  185 (507)
                      ..++.++.++++..+|+.|+++|+++...+++......+.+.++.+++.+++.+.+...++.++|+.+++..+++++++.
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  197 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR  197 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence            33333233566666799999999995443445555555666666778999999976444456799999999999999999


Q ss_pred             HhhCCCCCCCCc----chhHHHHHHHHHHHHHHh---ccccccccccc-hhhhhhhhhhHHHHHHHHHHhhHHHHHHHHH
Q 035827          186 LGFGKRSGDESE----TITERSRFHTLLNEIQAL---SIGFFVTDYFP-FMGWIDKLTGMIRRLENNFQESDRFYQELID  257 (507)
Q Consensus       186 ~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  257 (507)
                      ++||.+++....    +......+......+...   .......+.+| |++++. +.+...+.......+.++++..++
T Consensus       198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~  276 (534)
T PLN03018        198 MLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWN-IDGQEERAKVNVNLVRSYNNPIID  276 (534)
T ss_pred             HHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence            999999864211    011111122122222211   11111222333 333211 112233444455677888888888


Q ss_pred             hhccccccc-cccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHH
Q 035827          258 EHLDPKRTK-AKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEI  336 (507)
Q Consensus       258 ~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei  336 (507)
                      ++++..++. ......|+++.+++..++.+ ...++++++++++.++++||+|||+.+++|++++|+.||++|+++++||
T Consensus       277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei  355 (534)
T PLN03018        277 ERVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKEL  355 (534)
T ss_pred             HHHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            876543211 11124689999997654332 1138999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCC
Q 035827          337 RSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEE  416 (507)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  416 (507)
                      +++++.+ +.++.+++.+|||++|||+|++|++|++|...+|.+.+|++++||.|||||.|.++.+++||||++|+||++
T Consensus       356 ~~v~~~~-~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~  434 (534)
T PLN03018        356 DEVVGKD-RLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLV  434 (534)
T ss_pred             HHHhCCC-CCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccc
Confidence            9999754 678999999999999999999999999998778999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCcCc-----cCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeee
Q 035827          417 FNPERFIDRSIDF-----KGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVH  491 (507)
Q Consensus       417 F~P~R~~~~~~~~-----~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~  491 (507)
                      |+||||++++...     ...+..++|||+|+|+|||++||++|+++++++|+++|++++.++.  .+++.....+.+..
T Consensus       435 F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~  512 (534)
T PLN03018        435 YEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDASLLM  512 (534)
T ss_pred             cCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccceec
Confidence            9999999754221     1245689999999999999999999999999999999999987653  12333333455555


Q ss_pred             eccceEEEeeecCC
Q 035827          492 KKNYLFLLAKDHEY  505 (507)
Q Consensus       492 ~~~~~~v~~~~r~~  505 (507)
                      | .++.|++++|.+
T Consensus       513 p-~~~~v~~~~R~~  525 (534)
T PLN03018        513 A-KPLLLSVEPRLA  525 (534)
T ss_pred             C-CCeEEEEEeccc
Confidence            5 599999999953


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.8e-75  Score=571.73  Aligned_cols=441  Identities=20%  Similarity=0.355  Sum_probs=338.1

Q ss_pred             ccCCCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCC
Q 035827           24 YQQKKIKLPPGPQGLPFIGNLHQFD----VSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSR   99 (507)
Q Consensus        24 ~~~~~~~~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~   99 (507)
                      ..+++.+.||||+++|++||++.+.    ..+++.++.+++++||++|++++|++++|+++||+++++++.+++..|.++
T Consensus        32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            4455678899999999999976432    135667889999999999999999999999999999999999877666543


Q ss_pred             CchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhh-hhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHH
Q 035827          100 PALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQN-FRPIREDEVSRMIESISKSAAASKQVNLSEIMMSL  178 (507)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~  178 (507)
                      ........+   |...++..+|+.|+++||+ +.+.|+...++. +.+.+.+.+..+++.+.    ++.++|+.+.+..+
T Consensus       112 ~~~~~~~~~---g~~~~~~~~g~~wr~~Rk~-~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~  183 (490)
T PLN02500        112 YPRSIGGIL---GKWSMLVLVGDMHRDMRSI-SLNFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKF  183 (490)
T ss_pred             CchHHHHHh---CcccccccCCHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHH
Confidence            222221112   2223444579999999999 568899888876 56777777777777664    24578999999999


Q ss_pred             HHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHh
Q 035827          179 SCNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDE  258 (507)
Q Consensus       179 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  258 (507)
                      +++++++++||.+.+..     ....+......+......  ....+|...        .++..+..+.+.+++...+++
T Consensus       184 ~~~vi~~~~fg~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~p~~~--------~~~~~~~~~~~~~~~~~~i~~  248 (490)
T PLN02500        184 TFNLMAKHIMSMDPGEE-----ETEQLKKEYVTFMKGVVS--APLNFPGTA--------YRKALKSRATILKFIERKMEE  248 (490)
T ss_pred             HHHHHHHHHhCCCCCch-----HHHHHHHHHHHHHhhhhc--chhcCCCcc--------cHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999976532     222232222222221111  011123211        233344566777888888887


Q ss_pred             hcccccccc-ccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHH
Q 035827          259 HLDPKRTKA-KVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIR  337 (507)
Q Consensus       259 ~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~  337 (507)
                      +++..+.+. .....|+++.+++.       ..++++++++++.++++||+|||+++++|++++|++||++|+|+|+|++
T Consensus       249 ~~~~~~~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~  321 (490)
T PLN02500        249 RIEKLKEEDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHL  321 (490)
T ss_pred             HHHhhhcccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence            765432211 11346899998863       2489999999999999999999999999999999999999999999999


Q ss_pred             HhhCC----CCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCC
Q 035827          338 SLVGG----KKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWEN  413 (507)
Q Consensus       338 ~~~~~----~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~  413 (507)
                      ++.+.    +++.++++|+.+|||++|||+|++|++|++|. ++|.+.+|++++||.|||||.|.++++++||||++|+|
T Consensus       322 ~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~d  400 (490)
T PLN02500        322 EIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQ  400 (490)
T ss_pred             HHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCC
Confidence            98742    22468999999999999999999999999998 57999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCcCc------cCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccc
Q 035827          414 PEEFNPERFIDRSIDF------KGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAG  487 (507)
Q Consensus       414 p~~F~P~R~~~~~~~~------~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~  487 (507)
                      |++|+||||++++...      ...++.++|||+|+|+|+|++||++|+++++++|+++|+|++.++..  .  .  .+.
T Consensus       401 P~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~--~--~--~~~  474 (490)
T PLN02500        401 PQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ--A--F--AFP  474 (490)
T ss_pred             ccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc--c--e--ecc
Confidence            9999999999754221      12456899999999999999999999999999999999999876532  1  1  112


Q ss_pred             eeeeeccceEEEeee
Q 035827          488 IAVHKKNYLFLLAKD  502 (507)
Q Consensus       488 ~~~~~~~~~~v~~~~  502 (507)
                      .+ .+..++.|++++
T Consensus       475 ~~-~~~~~l~~~~~~  488 (490)
T PLN02500        475 FV-DFPKGLPIRVRR  488 (490)
T ss_pred             cc-cCCCCceEEEEe
Confidence            22 334699998875


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2e-74  Score=559.81  Aligned_cols=435  Identities=22%  Similarity=0.332  Sum_probs=340.5

Q ss_pred             ccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchh
Q 035827           24 YQQKKIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALV  103 (507)
Q Consensus        24 ~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~  103 (507)
                      ..+.+.+.||||+++|++||++.+ ..++..++.+++++||++|++++|++++++++||+.+++++.++...+.......
T Consensus        25 ~~~~r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  103 (463)
T PLN02774         25 VRYSKKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQS  103 (463)
T ss_pred             hccCCCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHH
Confidence            334455788999999999998776 4567788999999999999999999999999999999999987766553332222


Q ss_pred             hhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhh-hhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHH
Q 035827          104 VTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQN-FRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNI  182 (507)
Q Consensus       104 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~  182 (507)
                      ....+   |.+.+++.+|+.|+++|+. +.+.|+...++. +.+.+.+.++.+++++..    ++++|+.+.+..+++++
T Consensus       104 ~~~~l---g~~~~~~~~g~~w~~~R~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~  175 (463)
T PLN02774        104 MLDIL---GTCNIAAVHGSTHRYMRGS-LLSLISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLS  175 (463)
T ss_pred             HHHHh---CccchhhcCCHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHH
Confidence            22222   2234455679999999999 468899988876 788888888888777642    35789999999999999


Q ss_pred             HHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhccc
Q 035827          183 ICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLDP  262 (507)
Q Consensus       183 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (507)
                      ++.++||.+.+.      ....+......+...  ...+...+|.        ...++..++.+.+.+++.+.++++.+.
T Consensus       176 ~~~~~~g~~~~~------~~~~~~~~~~~~~~~--~~~~~~~lp~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~  239 (463)
T PLN02774        176 ALKQIAGTLSKP------ISEEFKTEFFKLVLG--TLSLPIDLPG--------TNYRSGVQARKNIVRMLRQLIQERRAS  239 (463)
T ss_pred             HHHHHcCCCChH------HHHHHHHHHHHHhcc--cccCCcCCCC--------hhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999986532      122222222222111  1111111221        112344556677888888888887643


Q ss_pred             cccccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhCC
Q 035827          263 KRTKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVGG  342 (507)
Q Consensus       263 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~  342 (507)
                      .   .  ...|+++.+++...+   +..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.
T Consensus       240 ~---~--~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~  311 (463)
T PLN02774        240 G---E--THTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRER  311 (463)
T ss_pred             C---C--CcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence            1   1  456999999874322   2358999999999999999999999999999999999999999999999999864


Q ss_pred             C--CCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCCCCCC
Q 035827          343 K--KSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE  420 (507)
Q Consensus       343 ~--~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~  420 (507)
                      .  ++.++++++.+|||++|||+|++|++|+++. .+|.+.+|++++||.||||+.|.++.+.+||||++|+||++|+||
T Consensus       312 ~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~Pe  390 (463)
T PLN02774        312 KRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPW  390 (463)
T ss_pred             cCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCch
Confidence            2  3568999999999999999999999999986 579999999999999999999999999999999999999999999


Q ss_pred             ccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEEEe
Q 035827          421 RFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFLLA  500 (507)
Q Consensus       421 R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  500 (507)
                      ||++++..   ....++|||+|+|+|||++||++|++++++.|+++|+|++.++...  ..    . -++.|++++.|++
T Consensus       391 Rfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~--~~----~-~~~~p~~g~~~~~  460 (463)
T PLN02774        391 RWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL--MK----F-PRVEAPNGLHIRV  460 (463)
T ss_pred             hcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc--cc----C-CCCCCCCCceEEe
Confidence            99975421   1236899999999999999999999999999999999999765321  11    1 1344789999998


Q ss_pred             ee
Q 035827          501 KD  502 (507)
Q Consensus       501 ~~  502 (507)
                      +|
T Consensus       461 ~~  462 (463)
T PLN02774        461 SP  462 (463)
T ss_pred             ee
Confidence            75


No 20 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.6e-73  Score=555.85  Aligned_cols=454  Identities=19%  Similarity=0.353  Sum_probs=340.4

Q ss_pred             CCCCCCCCCCcccccccCCCCCCC--chhHHHHHHhcCCcEE---EeecCccEEEecCHHHHHHHHHhcCcccCCCCchh
Q 035827           29 IKLPPGPQGLPFIGNLHQFDVSKP--HVSFWELSKKYGPLMS---LRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALV  103 (507)
Q Consensus        29 ~~~~pgp~~~p~~G~~~~~~~~~~--~~~~~~~~~~yG~v~~---~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~  103 (507)
                      .+..|||+++|++||+..+.....  .+.+.+..++||..++   .++|+.++|+++||+.+++|+.++...|.+.+...
T Consensus        30 ~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~  109 (500)
T PLN02169         30 PHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK  109 (500)
T ss_pred             cCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence            346889999999999876532222  2233344445887666   57789999999999999999998766665543222


Q ss_pred             hhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhh--hhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHH
Q 035827          104 VTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQN--FRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCN  181 (507)
Q Consensus       104 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~  181 (507)
                      .....  .|.++ ++.+|+.|+++||+ +.+.|+...+..  +.+.+.+.++.+++.+.+...++.++|+.+.+..+++|
T Consensus       110 ~~~~~--~g~gl-~~~~g~~Wr~~Rk~-l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~d  185 (500)
T PLN02169        110 KIFDV--LGEGI-LTVDFELWEDLRKS-NHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFD  185 (500)
T ss_pred             HHHHh--hcCcc-cccCcHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHH
Confidence            21111  24444 45579999999999 679999887764  34667788888888887655566789999999999999


Q ss_pred             HHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhh-h-hhh-hhHHHHHHHHHHhhHHHHHHHHHh
Q 035827          182 IICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGW-I-DKL-TGMIRRLENNFQESDRFYQELIDE  258 (507)
Q Consensus       182 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~  258 (507)
                      +++.++||.+.+...... ....+...........   ....+.|++.+ + .++ .+..++..+..+.+.+++...|++
T Consensus       186 vi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~  261 (500)
T PLN02169        186 TSSILMTGYDPMSLSIEM-LEVEFGEAADIGEEAI---YYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISS  261 (500)
T ss_pred             HHHhheeCCCccccCCCC-CCCHHHHHHHHHHHHH---HhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999876532111 1123433333332211   11123343221 1 111 234566778888899999999988


Q ss_pred             hccccccc--cccccchHHHHHHHhhhhc-CCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHH
Q 035827          259 HLDPKRTK--AKVQQEDLVDVLLQIRKDH-GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEE  335 (507)
Q Consensus       259 ~~~~~~~~--~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~E  335 (507)
                      +++...+.  ......|+++.+++...+. .....++++++++++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       262 r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~E  341 (500)
T PLN02169        262 RRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHE  341 (500)
T ss_pred             HHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            76542111  1012468999999764321 10124788999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCcc-ccccccCCCCEEEEehhhhcCCCCCC-CC
Q 035827          336 IRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCT-IDGYEIPAKTLVYVNAWAIGRDPEAW-EN  413 (507)
Q Consensus       336 i~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~-~~g~~ip~g~~v~~~~~~~~~d~~~~-~~  413 (507)
                      +++++       +.+++.+||||+|||+||||++|++|... |.+.+|.+ ++||.|||||.|.++++++||||++| +|
T Consensus       342 i~~v~-------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~d  413 (500)
T PLN02169        342 INTKF-------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGED  413 (500)
T ss_pred             HHhhC-------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCC
Confidence            98863       67899999999999999999999999855 66666655 59999999999999999999999999 89


Q ss_pred             CCCCCCCccccCCcCcc-CCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeee
Q 035827          414 PEEFNPERFIDRSIDFK-GQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHK  492 (507)
Q Consensus       414 p~~F~P~R~~~~~~~~~-~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  492 (507)
                      |++|+||||++++...+ ..++.|+|||+|+|+|+|++||++|+|++++.|+++|+|++.++.   ++  ....+++++|
T Consensus       414 P~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~~~~~l~~  488 (500)
T PLN02169        414 ALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAIPSILLRM  488 (500)
T ss_pred             hhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccccceEEec
Confidence            99999999997644322 236789999999999999999999999999999999999887543   12  2345678999


Q ss_pred             ccceEEEeeec
Q 035827          493 KNYLFLLAKDH  503 (507)
Q Consensus       493 ~~~~~v~~~~r  503 (507)
                      ++++.|++++|
T Consensus       489 ~~gl~l~l~~~  499 (500)
T PLN02169        489 KHGLKVTVTKK  499 (500)
T ss_pred             CCCEEEEEEeC
Confidence            99999999987


No 21 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.9e-73  Score=561.16  Aligned_cols=456  Identities=23%  Similarity=0.390  Sum_probs=342.3

Q ss_pred             CCCCCCCCcccccccCCCCCCCchhHHHHHHhc---CCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchhhh-h
Q 035827           31 LPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKY---GPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALVVT-Q  106 (507)
Q Consensus        31 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~y---G~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~~~-~  106 (507)
                      .+|||+++|++||++.+..  .+..+.+|.++|   |++|.+++|+.+.|+++||+.+++|+.++...+...+..... .
T Consensus        31 ~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~  108 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLK--NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME  108 (516)
T ss_pred             ccCCCCCCCeecchHHHHh--ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH
Confidence            4799999999999876532  245567888888   899999999999999999999999998764445443322111 1


Q ss_pred             hhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhH-HHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHHH
Q 035827          107 KLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIR-EDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIICR  185 (507)
Q Consensus       107 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  185 (507)
                      .+.  |.+ +++.+|+.|+++||+ +++.|+.+.++.+.+.+ .+.++.+.+.+.+...++.++|+.+++..+++|+++.
T Consensus       109 ~~~--g~~-l~~~~g~~w~~~Rr~-l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  184 (516)
T PLN03195        109 VLL--GDG-IFNVDGELWRKQRKT-ASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICK  184 (516)
T ss_pred             HHh--cCe-eeccCcHHHHHHHHh-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHH
Confidence            111  334 556689999999999 67889999999999876 6667777777765434456799999999999999999


Q ss_pred             HhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhh-hhHHHHHHHHHHhhHHHHHHHHHhhccccc
Q 035827          186 LGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKL-TGMIRRLENNFQESDRFYQELIDEHLDPKR  264 (507)
Q Consensus       186 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  264 (507)
                      ++||.+++...... ....+.............   ....|++.....+ ....+...+....+.++++..+++++++..
T Consensus       185 ~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (516)
T PLN03195        185 VGFGVEIGTLSPSL-PENPFAQAFDTANIIVTL---RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMD  260 (516)
T ss_pred             HHhCCCccccccCC-CccHHHHHHHHHHHHHHH---HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999987543211 112233333322211100   0011211110001 112234455666788888888887765432


Q ss_pred             cc---cccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhC
Q 035827          265 TK---AKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVG  341 (507)
Q Consensus       265 ~~---~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~  341 (507)
                      ++   ......|+++.++++..+.  +..+++++++++++++++||+|||+++++|++++|++||++|+||++|++++++
T Consensus       261 ~~~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~  338 (516)
T PLN03195        261 EARKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEK  338 (516)
T ss_pred             ccccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhh
Confidence            11   0013568999999754332  235999999999999999999999999999999999999999999999999875


Q ss_pred             CC-------------------CCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccc-cccccCCCCEEEEeh
Q 035827          342 GK-------------------KSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTI-DGYEIPAKTLVYVNA  401 (507)
Q Consensus       342 ~~-------------------~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~  401 (507)
                      +.                   ++.++++++.+||||+|||+|+||++|++|.. +|.+.+|.++ +|+.|||||.|.++.
T Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~  417 (516)
T PLN03195        339 ERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVP  417 (516)
T ss_pred             cccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEeh
Confidence            31                   24689999999999999999999999999985 5666676555 999999999999999


Q ss_pred             hhhcCCCCCC-CCCCCCCCCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCC
Q 035827          402 WAIGRDPEAW-ENPEEFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDL  480 (507)
Q Consensus       402 ~~~~~d~~~~-~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~  480 (507)
                      +++||||++| +||++|+||||++++......++.++|||+|+|+|+|++||++|++++++.|+++|++++.++.+   .
T Consensus       418 ~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~---~  494 (516)
T PLN03195        418 YSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP---V  494 (516)
T ss_pred             HhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc---c
Confidence            9999999999 99999999999964321223456799999999999999999999999999999999999875431   2


Q ss_pred             CcccccceeeeeccceEEEeeecC
Q 035827          481 DFDVLAGIAVHKKNYLFLLAKDHE  504 (507)
Q Consensus       481 ~~~~~~~~~~~~~~~~~v~~~~r~  504 (507)
                      .  .....+..|+.++.|++++|.
T Consensus       495 ~--~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        495 K--YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             e--eeeeeEEecCCCEEEEEEeCC
Confidence            2  233456789999999999874


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=7e-75  Score=570.91  Aligned_cols=456  Identities=34%  Similarity=0.602  Sum_probs=364.5

Q ss_pred             CCCCCCCcccccccCCC-CCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchhhhhh--h
Q 035827           32 PPGPQGLPFIGNLHQFD-VSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALVVTQK--L  108 (507)
Q Consensus        32 ~pgp~~~p~~G~~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~~~~~--~  108 (507)
                      ||||+++|++||++.+. .++++..+.+++++||++|++++++.++|+|+||+.+++|+..+...++.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999998874 26788889999999999999999999999999999999999998766665533222221  1


Q ss_pred             hcCCcceEEcCCChhHHHHHHHHHHhhcchh-hhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHHHHh
Q 035827          109 SYNGLDLVFSPYGEYWREIRKICVIHLFNSN-RAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIICRLG  187 (507)
Q Consensus       109 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~  187 (507)
                      ...+.+ ++..+|+.|+.+|+. +.+.|+.. .+ .+.+.+.+.++.+++.+.+....++.+|+.+++..+++|+++.++
T Consensus        81 ~~~~~~-l~~~~~~~~~~~R~~-~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKG-LFFSDGERWRRQRRL-LAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTS-STTSSHHHHHHHHHH-HHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             cccccc-ccccccccccccccc-ccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            222344 455568999999999 56777777 66 999999999999999999876666689999999999999999999


Q ss_pred             hCCCCCCCCcchhHHHHHHHHHHHHHHhcccc--ccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhcccccc
Q 035827          188 FGKRSGDESETITERSRFHTLLNEIQALSIGF--FVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLDPKRT  265 (507)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  265 (507)
                      ||.+++...  ......+.+....+.......  .+...+|++.++.  ....+...++.+.+.+++...++++++....
T Consensus       158 fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  158 FGKDFGSLD--DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP--TPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HSSHHHGTT--HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             ccceeeecc--cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence            999987432  112234455555554332211  2334455444432  2455666677788889999999988877655


Q ss_pred             ccccccchHHHHHHHhh-hhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhCCCC
Q 035827          266 KAKVQQEDLVDVLLQIR-KDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVGGKK  344 (507)
Q Consensus       266 ~~~~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~  344 (507)
                      + .....|+++.+++.. +.++ +..+++++++++++.+++||+|||+.+++|++++|++||++|++|++|++++.+++ 
T Consensus       234 ~-~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-  310 (463)
T PF00067_consen  234 G-DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDG-  310 (463)
T ss_dssp             S-SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTS-
T ss_pred             c-cccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            3 125789999999987 3332 13799999999999999999999999999999999999999999999999999544 


Q ss_pred             CCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCCCCCCcccc
Q 035827          345 SFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFID  424 (507)
Q Consensus       345 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~  424 (507)
                      +.++.+++.+||||+|||+|++|++|+++..++|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+||||++
T Consensus       311 ~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~  390 (463)
T PF00067_consen  311 REITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLD  390 (463)
T ss_dssp             SSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            67999999999999999999999999999668899999999999999999999999999999999999999999999998


Q ss_pred             CCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEEEe
Q 035827          425 RSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFLLA  500 (507)
Q Consensus       425 ~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  500 (507)
                      .+.........++|||+|+|.|||++||++|+++++++|+++|||++.++.... ...... + +..|+.+++|++
T Consensus       391 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~  463 (463)
T PF00067_consen  391 ERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPE-PQEQQN-G-FLLPPKPLKVKF  463 (463)
T ss_dssp             TTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGG-EEECSC-S-SSEEESSSEEEE
T ss_pred             cccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCC-CccccC-c-eEeeCCCcEEeC
Confidence            765334467889999999999999999999999999999999999997754322 112111 3 344555777764


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=5.5e-73  Score=559.20  Aligned_cols=458  Identities=23%  Similarity=0.408  Sum_probs=344.5

Q ss_pred             CCCCCCCCCCCcc----------------cccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHh
Q 035827           28 KIKLPPGPQGLPF----------------IGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKT   91 (507)
Q Consensus        28 ~~~~~pgp~~~p~----------------~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~   91 (507)
                      ....+|||+-..+                .||+..+..++.+..+.++|++||+||++++|+.++|+|+||+.+++||..
T Consensus       113 ~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~  192 (633)
T PLN02738        113 AKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRD  192 (633)
T ss_pred             hhCCCCCchHHHHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhh
Confidence            4467888883222                333333334556778899999999999999999999999999999999997


Q ss_pred             cCcccCCCCchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccH
Q 035827           92 HDLQFSSRPALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNL  171 (507)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~  171 (507)
                      +...|...+........  .+.+ +++.+|+.|+++|+. +.++|+.+.++.+.+.+.+.++.+++++.+...+++++|+
T Consensus       193 ~~~~f~k~~~~~~~~~~--~g~~-l~~~dge~wr~rRr~-l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl  268 (633)
T PLN02738        193 NSKAYSKGILAEILEFV--MGKG-LIPADGEIWRVRRRA-IVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEM  268 (633)
T ss_pred             CcccCCCcchHHHHhhc--cCCc-eecCCcHHHHHHHHh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeH
Confidence            76666654332221111  2334 455679999999999 6799999999999999999999999999876556778999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHH
Q 035827          172 SEIMMSLSCNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRF  251 (507)
Q Consensus       172 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~  251 (507)
                      .+.+..+++|+|+.++||.+++...++......+...+...............+|.+..   ++...++..+..+.+.++
T Consensus       269 ~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---l~~~~~~~~~~~~~l~~~  345 (633)
T PLN02738        269 ESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKD---ISPRQRKVAEALKLINDT  345 (633)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhh---hchHHHHHHHHHHHHHHH
Confidence            99999999999999999999876432221222222222222111111001111222211   112223333344444444


Q ss_pred             HHHHHHhhccccc-------cc-cccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q 035827          252 YQELIDEHLDPKR-------TK-AKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLM  323 (507)
Q Consensus       252 ~~~~i~~~~~~~~-------~~-~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~  323 (507)
                      .+.+++.+++..+       .. ......|+++.|++..      .+++++++.++++.+++||+|||+.+++|++++|+
T Consensus       346 ~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~  419 (633)
T PLN02738        346 LDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLS  419 (633)
T ss_pred             HHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence            5444443221110       00 0113468999998642      25899999999999999999999999999999999


Q ss_pred             hCchHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhh
Q 035827          324 KHPRVMKKVQEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWA  403 (507)
Q Consensus       324 ~~P~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~  403 (507)
                      +||++|+|||+|+++++++  +.++++++++||||+|||+|+|||+|+++. .+|++.+|.+++||.||+||.|.++.+.
T Consensus       420 ~~Pevq~kLreEl~~v~~~--~~~t~edL~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~  496 (633)
T PLN02738        420 KEPSVVAKLQEEVDSVLGD--RFPTIEDMKKLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWN  496 (633)
T ss_pred             hCHHHHHHHHHHHHHhcCC--CCCCHHHHccCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHH
Confidence            9999999999999999873  678999999999999999999999999998 5688999999999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCCCccccCCc--CccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCC
Q 035827          404 IGRDPEAWENPEEFNPERFIDRSI--DFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLD  481 (507)
Q Consensus       404 ~~~d~~~~~~p~~F~P~R~~~~~~--~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~  481 (507)
                      +||||++|+||++|+||||+....  ........++|||.|+|+|+|++||++|++++++.|+++|+|++.++..  +  
T Consensus       497 ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~--  572 (633)
T PLN02738        497 LHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--P--  572 (633)
T ss_pred             HhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--C--
Confidence            999999999999999999985321  1223456899999999999999999999999999999999999876542  1  


Q ss_pred             cccccceeeeeccceEEEeeecCC
Q 035827          482 FDVLAGIAVHKKNYLFLLAKDHEY  505 (507)
Q Consensus       482 ~~~~~~~~~~~~~~~~v~~~~r~~  505 (507)
                      .....+.+..+++++.|++++|..
T Consensus       573 ~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        573 VKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             cccccceEEeeCCCcEEEEEECCC
Confidence            222346778888999999998853


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=5.8e-73  Score=549.00  Aligned_cols=429  Identities=23%  Similarity=0.390  Sum_probs=342.9

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchhhhh
Q 035827           27 KKIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALVVTQ  106 (507)
Q Consensus        27 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~~~~  106 (507)
                      .+.+.||||+++|++||+..+...+++.++.+++++||++++++++++++|+++||+++++++.++...+.  +......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHH
Confidence            35678899999999999877546788999999999999999999999999999999999999988766553  2222111


Q ss_pred             hhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHHHH
Q 035827          107 KLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIICRL  186 (507)
Q Consensus       107 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~  186 (507)
                      .... |...++..+|+.|+++||+ +.+.|+.+.++.+.+.+.+.++.+++.+.     ++.+|+.+++..+++++++.+
T Consensus       110 ~~~~-g~~~l~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~  182 (463)
T PLN02196        110 ERML-GKQAIFFHQGDYHAKLRKL-VLRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALLS  182 (463)
T ss_pred             HHHc-CcccccccCcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHH
Confidence            1122 3334555679999999999 56889999999999999999999988763     346899999999999999999


Q ss_pred             hhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhccccccc
Q 035827          187 GFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLDPKRTK  266 (507)
Q Consensus       187 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (507)
                      +||.+...      ....+.+....+....      ..+|+.  +.  ....++..++...+.+++.+.++++++...  
T Consensus       183 ~fG~~~~~------~~~~~~~~~~~~~~~~------~~~~~~--~p--~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~--  244 (463)
T PLN02196        183 IFGKDEVL------YREDLKRCYYILEKGY------NSMPIN--LP--GTLFHKSMKARKELAQILAKILSKRRQNGS--  244 (463)
T ss_pred             HcCCCCch------HHHHHHHHHHHHhcch------hccccc--CC--CccchHHHHHHHHHHHHHHHHHHHHhhcCC--
Confidence            99987532      1122222222111111      011211  10  011234556667788888888887765321  


Q ss_pred             cccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhCCC--C
Q 035827          267 AKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVGGK--K  344 (507)
Q Consensus       267 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~--~  344 (507)
                         ...|+++.+++.   .   ..++++++.++++++++||+|||+++++|++++|++||++|+++++|++++.+..  .
T Consensus       245 ---~~~d~l~~ll~~---~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  315 (463)
T PLN02196        245 ---SHNDLLGSFMGD---K---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEG  315 (463)
T ss_pred             ---CcccHHHHHHhc---C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccC
Confidence               356889888852   1   2589999999999999999999999999999999999999999999999988642  3


Q ss_pred             CCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCCCCCCcccc
Q 035827          345 SFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFID  424 (507)
Q Consensus       345 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~  424 (507)
                      +.++++++.+||||+|||+|++|++|+++.. .|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||++
T Consensus       316 ~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~  394 (463)
T PLN02196        316 ESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEV  394 (463)
T ss_pred             CCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcC
Confidence            5689999999999999999999999999985 599999999999999999999999999999999999999999999996


Q ss_pred             CCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEEEeeec
Q 035827          425 RSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFLLAKDH  503 (507)
Q Consensus       425 ~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  503 (507)
                      ..     .+..++|||+|+|.|+|+++|++|++++++.|+++|+|++.++..    .  ..+..+..|++++.|+++.+
T Consensus       395 ~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~----~--~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        395 AP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN----G--IQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             CC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC----c--eEEcccccCCCCceEEEecC
Confidence            32     346899999999999999999999999999999999999876421    1  23344566999999988753


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=9e-72  Score=540.08  Aligned_cols=437  Identities=22%  Similarity=0.335  Sum_probs=341.3

Q ss_pred             CCCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCc
Q 035827           26 QKKIKLPPGPQGLPFIGNLHQFD----VSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPA  101 (507)
Q Consensus        26 ~~~~~~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~  101 (507)
                      +++.+.||||+++|++||++.+.    ..+++.++.+|+++||++|++++|+.++|+++||+.+++++.+++..+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            56778899999999999987762    24688889999999999999999999999999999999999988777765432


Q ss_pred             hhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhh-hhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHH
Q 035827          102 LVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQN-FRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSC  180 (507)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~  180 (507)
                      ... ..+.  |.+.++..+|+.|+++|++ +.+.|+...+.. +.+.+.+.++.+++++.    ++..+|+.+.+..+++
T Consensus        83 ~~~-~~l~--g~~~~~~~~g~~wr~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         83 KSL-TELM--GKSSILLINGSLQRRVHGL-IGAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAF  154 (452)
T ss_pred             hhH-HHHh--CcccccccCcHHHHHHHHH-HHHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHH
Confidence            212 2222  3334566689999999999 567787766655 34555566655555542    3567899999999999


Q ss_pred             HHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhc
Q 035827          181 NIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHL  260 (507)
Q Consensus       181 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  260 (507)
                      ++++.++||.+.+.      ....+......+......  +...+|..        ...+..++.+++.+++...+++++
T Consensus       155 ~vi~~~~~G~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~~  218 (452)
T PLN03141        155 EVLVKALISLEPGE------EMEFLKKEFQEFIKGLMS--LPIKLPGT--------RLYRSLQAKKRMVKLVKKIIEEKR  218 (452)
T ss_pred             HHHHHHHcCCCchH------HHHHHHHHHHHHhhhHHh--CccCCCch--------HhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999976542      222333333322221111  11122221        112334567788888888888876


Q ss_pred             cccccccc---cccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHH
Q 035827          261 DPKRTKAK---VQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIR  337 (507)
Q Consensus       261 ~~~~~~~~---~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~  337 (507)
                      +....+..   ....|+++.++++..     ..+++++++.+++++++||+|||+.+++|++++|+.||++|+++++|++
T Consensus       219 ~~~~~~~~~~~~~~~d~l~~ll~~~~-----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~  293 (452)
T PLN03141        219 RAMKNKEEDETGIPKDVVDVLLRDGS-----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENM  293 (452)
T ss_pred             HHHhccCccccCChhhHHHHHHhcCC-----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence            54322110   024689999987531     2589999999999999999999999999999999999999999999999


Q ss_pred             HhhC---CCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCC
Q 035827          338 SLVG---GKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENP  414 (507)
Q Consensus       338 ~~~~---~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p  414 (507)
                      ++.+   ..++.++.+++.+||||+|||+|++|++|+++. ++|.+.+|++++||.||||+.|.++.+++|+||++|+||
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP  372 (452)
T PLN03141        294 KLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNP  372 (452)
T ss_pred             HHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCc
Confidence            8864   223568999999999999999999999999985 689999999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeecc
Q 035827          415 EEFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKN  494 (507)
Q Consensus       415 ~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (507)
                      ++|+||||++++.    .++.++|||+|+|+|+|++||++|++++++.|+++|+|+++++..     .   ...++.|+.
T Consensus       373 ~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~-----~---~~~~~~~~~  440 (452)
T PLN03141        373 YQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI-----V---NFPTVRMKR  440 (452)
T ss_pred             cccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe-----e---ecccccCCC
Confidence            9999999997532    356899999999999999999999999999999999998865421     1   124778889


Q ss_pred             ceEEEeeecC
Q 035827          495 YLFLLAKDHE  504 (507)
Q Consensus       495 ~~~v~~~~r~  504 (507)
                      ++.|++++|-
T Consensus       441 ~~~~~~~~~~  450 (452)
T PLN03141        441 KLPIWVTRID  450 (452)
T ss_pred             CceEEEEeCC
Confidence            9999999883


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=6.4e-71  Score=532.33  Aligned_cols=461  Identities=19%  Similarity=0.295  Sum_probs=350.2

Q ss_pred             CchHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHHhcCCcEEEeecCccE
Q 035827            1 MDLLVIIILLSLPICLFLFSVNTYQQKKIKLPPGPQGLPFIGNLHQFD----VSKPHVSFWELSKKYGPLMSLRLGFVPT   76 (507)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~   76 (507)
                      |++-..+.+++++.++..++..+....+.+.||||+++|++||++.+.    ..+++.++.+++++||+++++++++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~   80 (472)
T PLN02987          1 MAFSAFLLLLSSLAAIFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPT   80 (472)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCe
Confidence            444455555555555566666655566677899999999999987752    2467888999999999999999999999


Q ss_pred             EEecCHHHHHHHHHhcCcccCCCCchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhh-hHHHHHHHH
Q 035827           77 LVVSSAKMAKETLKTHDLQFSSRPALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRP-IREDEVSRM  155 (507)
Q Consensus        77 v~v~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~~~~~~~~l  155 (507)
                      |+++||+.+++++.++...|..+........+  ++.++ +..+|+.|+++|++ +.++++.+.++.+.. .+.+.++..
T Consensus        81 vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~l--g~~~l-~~~~g~~wr~~R~~-~~~f~~~~~~~~~~~~~~~~~~~~~  156 (472)
T PLN02987         81 VFSADPETNRFILQNEGKLFECSYPGSISNLL--GKHSL-LLMKGNLHKKMHSL-TMSFANSSIIKDHLLLDIDRLIRFN  156 (472)
T ss_pred             EEEeCHHHHHHHHhCCCceEEecCcHHHHHHh--Ccccc-cccCcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHH
Confidence            99999999999999887777544322222222  22334 44579999999999 445545445444331 122233333


Q ss_pred             HHHHHHhhhcCCcccHHHHHHHHHHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhh
Q 035827          156 IESISKSAAASKQVNLSEIMMSLSCNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLT  235 (507)
Q Consensus       156 ~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~  235 (507)
                      ++.|      .+++++.+.+..++++++++++||.+.+.      ..+.+...........    ....+|++      .
T Consensus       157 ~~~~------~~~v~~~~~~~~~t~~vi~~~~fg~~~~~------~~~~~~~~~~~~~~~~----~~~~~p~l------~  214 (472)
T PLN02987        157 LDSW------SSRVLLMEEAKKITFELTVKQLMSFDPGE------WTESLRKEYVLVIEGF----FSVPLPLF------S  214 (472)
T ss_pred             HHhh------ccceehHHHHHHHHHHHHHHHHcCCCChH------HHHHHHHHHHHHHhhh----hcCCCcCC------C
Confidence            3332      13689999999999999999999986642      1122222222221111    11223432      1


Q ss_pred             hHHHHHHHHHHhhHHHHHHHHHhhccccccccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHH
Q 035827          236 GMIRRLENNFQESDRFYQELIDEHLDPKRTKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATL  315 (507)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l  315 (507)
                      ...++..+..+++.+++.+.++++++....+. ....|+++.+++..      ..+++++++++++++++||+|||+.++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l  287 (472)
T PLN02987        215 TTYRRAIQARTKVAEALTLVVMKRRKEEEEGA-EKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIM  287 (472)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-cccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHH
Confidence            23455667778888899999988876433221 13579999999752      148999999999999999999999999


Q ss_pred             HHHHHHHHhCchHHHHHHHHHHHhhCC--CCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCC
Q 035827          316 VWAMTYLMKHPRVMKKVQEEIRSLVGG--KKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPA  393 (507)
Q Consensus       316 ~~~l~~L~~~P~~q~~lr~Ei~~~~~~--~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~  393 (507)
                      +|++++|++||++|+++++|++++.+.  ..+.++++++.+|||++||++|++|++|+++. .+|.+.+|++++||.||+
T Consensus       288 ~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~  366 (472)
T PLN02987        288 TLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPK  366 (472)
T ss_pred             HHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECC
Confidence            999999999999999999999998753  22557899999999999999999999999986 679999999999999999


Q ss_pred             CCEEEEehhhhcCCCCCCCCCCCCCCCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCC
Q 035827          394 KTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPP  473 (507)
Q Consensus       394 g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~  473 (507)
                      ||.|.++.+.+|+||++|+||++|+||||++.+.. ......++|||+|+|.|||++||++|++++++.|+++|+|++++
T Consensus       367 Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~  445 (472)
T PLN02987        367 GWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAE  445 (472)
T ss_pred             CCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECC
Confidence            99999999999999999999999999999975332 12346799999999999999999999999999999999999876


Q ss_pred             CCCCCCCCcccccceeeeeccceEEEeeec
Q 035827          474 GMKNQDLDFDVLAGIAVHKKNYLFLLAKDH  503 (507)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  503 (507)
                      +.+     .  ....++.|++++.+++++|
T Consensus       446 ~~~-----~--~~~~~~~p~~~~~~~~~~r  468 (472)
T PLN02987        446 QDK-----L--VFFPTTRTQKRYPINVKRR  468 (472)
T ss_pred             CCc-----e--eecccccCCCCceEEEEec
Confidence            532     1  1234788999999999987


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.1e-70  Score=540.75  Aligned_cols=442  Identities=22%  Similarity=0.351  Sum_probs=344.1

Q ss_pred             CCCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHHhcCC--cEEEeecCccEEEecCHHHHHHHHHhcCcccCCC
Q 035827           26 QKKIKLPPGPQGLPFIGNLHQFD----VSKPHVSFWELSKKYGP--LMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSR   99 (507)
Q Consensus        26 ~~~~~~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~yG~--v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~   99 (507)
                      ..+.+.||||+++|++|+++.+.    ..+++.++.+++++||+  +|++++++.+.|+++||+.+++|+.++. .|.+.
T Consensus        38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~  116 (490)
T PLN02302         38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPG  116 (490)
T ss_pred             cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccC
Confidence            34567899999999999987652    34688899999999997  7999999999999999999999998764 34433


Q ss_pred             CchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhc-chhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHH
Q 035827          100 PALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLF-NSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSL  178 (507)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~  178 (507)
                      ........+   |...+...+|+.|+++||. +.+.| +.+.++.+.+.+.+.+..+++.+..    ++.+|+.+.+..+
T Consensus       117 ~~~~~~~~~---g~~~~~~~~g~~w~~~R~~-~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~  188 (490)
T PLN02302        117 WPESTVELI---GRKSFVGITGEEHKRLRRL-TAAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRKL  188 (490)
T ss_pred             CchhHHHHh---ccccccccCcHHHHHHHHH-HHhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHHH
Confidence            222222211   3334455679999999999 55666 5778999999999999999998853    3469999999999


Q ss_pred             HHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHh
Q 035827          179 SCNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDE  258 (507)
Q Consensus       179 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  258 (507)
                      +++++++++||.+++.      ..+.+......+.......  ...+|..        ...+..+....+.+++...+++
T Consensus       189 ~~~vi~~~~~G~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~  252 (490)
T PLN02302        189 TFKIIMYIFLSSESEL------VMEALEREYTTLNYGVRAM--AINLPGF--------AYHRALKARKKLVALFQSIVDE  252 (490)
T ss_pred             HHHHHHHHHcCCCChH------HHHHHHHHHHHHHHHhhhC--CcCCCch--------hhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987653      1222222222111111110  0112221        1123334456677788888877


Q ss_pred             hccccccccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHH
Q 035827          259 HLDPKRTKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRS  338 (507)
Q Consensus       259 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~  338 (507)
                      +++...........|+++.++++.++.+  ..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|+++
T Consensus       253 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~  330 (490)
T PLN02302        253 RRNSRKQNISPRKKDMLDLLLDAEDENG--RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEE  330 (490)
T ss_pred             HHHhhhccCCCCcCCHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            7654332111245799999998754432  35899999999999999999999999999999999999999999999999


Q ss_pred             hhCCC---CCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCC
Q 035827          339 LVGGK---KSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPE  415 (507)
Q Consensus       339 ~~~~~---~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  415 (507)
                      +.++.   ...++++++.+||||+|||+|++|++|+++. .+|.+.+|++++||.||||+.|.++.+++||||++|+||+
T Consensus       331 v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~  409 (490)
T PLN02302        331 IAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPK  409 (490)
T ss_pred             HHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCcc
Confidence            98642   1237899999999999999999999999998 5699999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCcCccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccc
Q 035827          416 EFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNY  495 (507)
Q Consensus       416 ~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (507)
                      +|+||||++..    ..+..++|||+|+|+|+|++||.+|++++++.|+++|+|++.++.    ...  .+..+..|+.+
T Consensus       410 ~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~--~~~~~~~p~~~  479 (490)
T PLN02302        410 EFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----CKV--MYLPHPRPKDN  479 (490)
T ss_pred             ccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----Ccc--eeCCCCCCCCC
Confidence            99999999643    244678999999999999999999999999999999999987532    112  22234788889


Q ss_pred             eEEEeeecCC
Q 035827          496 LFLLAKDHEY  505 (507)
Q Consensus       496 ~~v~~~~r~~  505 (507)
                      +.+++++|.+
T Consensus       480 ~~~~~~~~~~  489 (490)
T PLN02302        480 CLARITKVAS  489 (490)
T ss_pred             ceEEEEeccC
Confidence            9999998865


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.3e-70  Score=535.63  Aligned_cols=453  Identities=23%  Similarity=0.372  Sum_probs=350.1

Q ss_pred             CCCCCCCCcccccccCCC----CCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchhhhh
Q 035827           31 LPPGPQGLPFIGNLHQFD----VSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALVVTQ  106 (507)
Q Consensus        31 ~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~~~~  106 (507)
                      +-.|-.|||++|..+.+.    .+.++..+.+|+++||+++++++|+.+.|+++||+++++|+...+..|..++......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            335777899999876643    4678889999999999999999999999999999999999987666676554322211


Q ss_pred             hhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhh-hHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHHH
Q 035827          107 KLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRP-IREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIICR  185 (507)
Q Consensus       107 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  185 (507)
                      ...  |.+ ++..+|+.|+++||. +.+.|+...++.+.+ ++.+.++.+++.+.+...++.++|+.+++..+++++++.
T Consensus        93 ~~~--~~~-i~~~~g~~wk~~Rk~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         93 FLF--GSG-FAIAEGELWTARRRA-VVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             HHh--cCc-cccCCchHHHHHHHh-hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            111  333 455679999999999 678899888888754 788899999999987655567899999999999999999


Q ss_pred             HhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhh--hhhhhhHHHHHHHHHHhhHHHHHHHHHhhcccc
Q 035827          186 LGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGW--IDKLTGMIRRLENNFQESDRFYQELIDEHLDPK  263 (507)
Q Consensus       186 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (507)
                      ++||.+++.....    ..+...+........ ......+|++.+  +..+.+..++..++...+.+++.+.++++++..
T Consensus       169 ~~fG~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~  243 (489)
T PLN02936        169 SVFNYNFDSLTTD----SPVIQAVYTALKEAE-TRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIV  243 (489)
T ss_pred             HHcCCCccccccC----cHHHHHHHHHHHHHH-HhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998864321    122222222211111 111123343211  111112334555666777777777777655332


Q ss_pred             cccc---------ccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHH
Q 035827          264 RTKA---------KVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQE  334 (507)
Q Consensus       264 ~~~~---------~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~  334 (507)
                      ++..         .....|+++.|++..      ..+++++|.++++++++||+|||+++++|++++|++||++|+++|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~  317 (489)
T PLN02936        244 EAEGEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQE  317 (489)
T ss_pred             hhcccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            1100         013467899888643      1488999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCC
Q 035827          335 EIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENP  414 (507)
Q Consensus       335 Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p  414 (507)
                      |++++++.  +.++++++.+||||+|||+||+|++|+++...+|.+.+|+.++||.||+||.|+++.+++||||++|+||
T Consensus       318 Ei~~~~~~--~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP  395 (489)
T PLN02936        318 ELDRVLQG--RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERA  395 (489)
T ss_pred             HHHHHhcC--CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCc
Confidence            99999874  4589999999999999999999999999988877777778889999999999999999999999999999


Q ss_pred             CCCCCCccccCCcC--ccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeee
Q 035827          415 EEFNPERFIDRSID--FKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHK  492 (507)
Q Consensus       415 ~~F~P~R~~~~~~~--~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  492 (507)
                      ++|+||||+.++..  ....+..++|||+|+|.|||++||++|++++++.|+++|++++.++.   ++  ....+++..|
T Consensus       396 ~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~--~~~~~~~~~~  470 (489)
T PLN02936        396 EEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DI--VMTTGATIHT  470 (489)
T ss_pred             cccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---cc--ceecceEEee
Confidence            99999999964321  12234589999999999999999999999999999999999987653   22  2234567778


Q ss_pred             ccceEEEeeecCC
Q 035827          493 KNYLFLLAKDHEY  505 (507)
Q Consensus       493 ~~~~~v~~~~r~~  505 (507)
                      +++++|++++|.+
T Consensus       471 ~~~~~v~~~~R~~  483 (489)
T PLN02936        471 TNGLYMTVSRRRV  483 (489)
T ss_pred             CCCeEEEEEeeeC
Confidence            8899999998865


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=6.2e-69  Score=522.59  Aligned_cols=443  Identities=21%  Similarity=0.309  Sum_probs=338.8

Q ss_pred             CcccccccCCCCCCCchhHHHHHHhcC-CcEEEeecCccEEEecCHHHHHHHHHhcCcccCCCCchh-hhhhhhcCCcce
Q 035827           38 LPFIGNLHQFDVSKPHVSFWELSKKYG-PLMSLRLGFVPTLVVSSAKMAKETLKTHDLQFSSRPALV-VTQKLSYNGLDL  115 (507)
Q Consensus        38 ~p~~G~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~dp~~i~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~  115 (507)
                      .++.|++... ..+.+..+..+.++++ .+++++.++.  ++++||+.+++|+..+...|.+..... ......  |.+ 
T Consensus        49 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~--g~g-  122 (502)
T PLN02426         49 AYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL--GRG-  122 (502)
T ss_pred             CCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc--CCc-
Confidence            5577887553 2455777777888887 5777776554  899999999999987755565433221 111222  444 


Q ss_pred             EEcCCChhHHHHHHHHHHhhcchhhhhhhh--hhHHHHHHHHHHHHHHhhhc--CCcccHHHHHHHHHHHHHHHHhhCCC
Q 035827          116 VFSPYGEYWREIRKICVIHLFNSNRAQNFR--PIREDEVSRMIESISKSAAA--SKQVNLSEIMMSLSCNIICRLGFGKR  191 (507)
Q Consensus       116 ~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~--~~~vd~~~~~~~~~~~~i~~~~fG~~  191 (507)
                      +++.+|+.|+++||. +++.|+...++.+.  +.+++..+.+++.+.+..+.  +.++|+.+++..+++|+++.++||.+
T Consensus       123 i~~~~g~~wk~~Rk~-l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  201 (502)
T PLN02426        123 IFNVDGDSWRFQRKM-ASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD  201 (502)
T ss_pred             eeecCcHHHHHHHHH-hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence            566679999999999 68899998888763  67778888888888764322  36799999999999999999999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhh-hh-hhHHHHHHHHHHhhHHHHHHHHHhhcccccccccc
Q 035827          192 SGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWID-KL-TGMIRRLENNFQESDRFYQELIDEHLDPKRTKAKV  269 (507)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  269 (507)
                      ++..+... ....+.+....+...... ......|+++.+. .+ .+..++..+..+.+.+++.+.|+++++...+    
T Consensus       202 ~~~l~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~----  275 (502)
T PLN02426        202 PGCLELSL-PISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFS----  275 (502)
T ss_pred             CcccCCCC-CccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccC----
Confidence            87653211 122344433333221111 1111224333221 11 1334566777888899999999988754221    


Q ss_pred             ccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhCCCCCCCCh
Q 035827          270 QQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVGGKKSFVDE  349 (507)
Q Consensus       270 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~~~~~~  349 (507)
                      ...|+++.++++.        .+++++.+++.++++||+|||+++++|++|+|++||++|+||++|++++++.+.+.+++
T Consensus       276 ~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~  347 (502)
T PLN02426        276 ASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASF  347 (502)
T ss_pred             CcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCH
Confidence            3579999999742        36789999999999999999999999999999999999999999999998765457899


Q ss_pred             hhhccchhHHHHHHHHhcCCCCCCcccccccccCccc-cccccCCCCEEEEehhhhcCCCCCC-CCCCCCCCCccccCCc
Q 035827          350 DDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTI-DGYEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSI  427 (507)
Q Consensus       350 ~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~  427 (507)
                      +++.+||||+|||+|++|++|++|.. .|.+.+|.++ +|+.||+||.|.++.+++||||++| +||++|+||||++++.
T Consensus       348 ~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~  426 (502)
T PLN02426        348 EEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV  426 (502)
T ss_pred             HHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC
Confidence            99999999999999999999999985 5888888777 8999999999999999999999999 9999999999997432


Q ss_pred             CccCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEEEeeecCC
Q 035827          428 DFKGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFLLAKDHEY  505 (507)
Q Consensus       428 ~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  505 (507)
                      .....++.++|||+|+|.|+|+++|++|++++++.|+++|++++.++.. .  ......+++.+|+++++|++++|..
T Consensus       427 ~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~-~--~~~~~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        427 FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN-R--APRFAPGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC-C--CCcccceeEEecCCCEEEEEEEccC
Confidence            1223456899999999999999999999999999999999999864321 1  1223446889999999999998864


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9e-68  Score=467.35  Aligned_cols=462  Identities=22%  Similarity=0.374  Sum_probs=359.9

Q ss_pred             HHHHHHHHHhhccccCCCCCCCCCCC-CCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHH
Q 035827           11 SLPICLFLFSVNTYQQKKIKLPPGPQ-GLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETL   89 (507)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~pgp~-~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il   89 (507)
                      +++.++++...+++++.+ ..||--+ ++|++|++..| ++++.+++.++.+|||+||++.++|..+.++.+|+....++
T Consensus        13 vi~~~l~~~~~~~~r~~~-~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~   90 (486)
T KOG0684|consen   13 VIALLLLLFLLLQRRTSR-KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVF   90 (486)
T ss_pred             HHHHHHHHHHHHhcccCC-CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHH
Confidence            333333333334333333 4556554 58999999999 89999999999999999999999999999999999999999


Q ss_pred             HhcCcccCCCCchhhhhhhhcCCcceEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHH-HHHhhhcCCc
Q 035827           90 KTHDLQFSSRPALVVTQKLSYNGLDLVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIES-ISKSAAASKQ  168 (507)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~  168 (507)
                      .+....++............+ |++++....+....++.+. +...+....++.+.+.|.+++...+.. +.   ++|.+
T Consensus        91 ~~~~~~ld~~~~~~~l~~~vF-g~~v~~d~~~~~~~e~~~~-~k~~L~~~~lk~~~e~m~~el~~~f~~~~~---~s~~~  165 (486)
T KOG0684|consen   91 KAKLADLDFEEAYSKLTTPVF-GKGVVYDVPNHVMMEQKKF-FKSALGGVALKSLVELMLEELHAYFETSLG---ESGET  165 (486)
T ss_pred             cCcccccCHHHHHHHhhhhhc-CCCccccCCCchHHHHHHH-HHHHhchhhHHHHHHHHHHHHHHHHhcccc---cccch
Confidence            876444432222211111111 5667777677777788787 567888899999999999999998887 33   25666


Q ss_pred             ccHHHHHHHHHHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccc-hhhhhhhhhhHHHHHHHHHHh
Q 035827          169 VNLSEIMMSLSCNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFP-FMGWIDKLTGMIRRLENNFQE  247 (507)
Q Consensus       169 vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~  247 (507)
                      -.+.+....+.+.+.-.++||+.....+++  ....+.+.-+.+.      .+...+| ++.+     ...+...++.++
T Consensus       166 d~l~~~~~~ii~tAs~~ll~~e~r~~~d~~--~a~l~~dLd~~F~------~~d~~FP~~LP~-----~~~r~~~ra~~~  232 (486)
T KOG0684|consen  166 DGLYTFCRLIIFTASRLLLGGEVRDQLDAD--VAKLYHDLDQGFQ------PFDFLFPYNLPI-----PLLRRRDRARKK  232 (486)
T ss_pred             hHhhhhhHHHhhhhHHHhhhhhhhhhhcch--HHHHHHHHhcccc------chHhhcccCCCc-----chhhhHHHHHHH
Confidence            677888888888888888888876653211  1122222222222      2233344 2221     344555678888


Q ss_pred             hHHHHHHHHHhhccccccccccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCch
Q 035827          248 SDRFYQELIDEHLDPKRTKAKVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPR  327 (507)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~  327 (507)
                      +.+.+...+.++++..+.    ...|++..+++ ....+  ...+++|+...++.+++||+.||+.+.+|++++|++|||
T Consensus       233 i~k~f~~~i~~rr~s~s~----~~~dmlq~l~~-~y~dg--~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe  305 (486)
T KOG0684|consen  233 ISKIFSKIILDRRASISK----WDNDMLQSLME-KYKDG--RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPE  305 (486)
T ss_pred             HHHHHHHHHHHHHhcccc----ccHHHHHHHHH-HhhcC--CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHH
Confidence            888888888888876543    56789999988 33333  469999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCccccc----cccCCCCEEEEehhh
Q 035827          328 VMKKVQEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDG----YEIPAKTLVYVNAWA  403 (507)
Q Consensus       328 ~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g----~~ip~g~~v~~~~~~  403 (507)
                      +++++++|+.+++|++...++.|++++||.|++||+|||||+||.+.. -|.+.+|.++.+    |.||+|.+|.++++.
T Consensus       306 ~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~  384 (486)
T KOG0684|consen  306 AQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKVHEDLTVPGSDGEYVIPKGDIVALSPFL  384 (486)
T ss_pred             HHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhhccceeeccCCcceecCCCCEEEecccc
Confidence            999999999999988867799999999999999999999999998874 499999999866    999999999999999


Q ss_pred             hcCCCCCCCCCCCCCCCccccCCcCc----cCCCccccccCCCCCCCCCchhHHHHHHHHHHHhHhcceeecCCCCCCCC
Q 035827          404 IGRDPEAWENPEEFNPERFIDRSIDF----KGQNFELIPFGAGRRICPGMHLGTANVELALANLLYKFDWEMPPGMKNQD  479 (507)
Q Consensus       404 ~~~d~~~~~~p~~F~P~R~~~~~~~~----~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~  479 (507)
                      +|+||++|+||+.|+|+||+++++..    ..-.+.++|||+|.|.|||+.||.+|+|.++..+|++||+++.++ +.++
T Consensus       385 ~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~  463 (486)
T KOG0684|consen  385 LHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPE  463 (486)
T ss_pred             ccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCC
Confidence            99999999999999999999755432    112345699999999999999999999999999999999999987 3333


Q ss_pred             CCcccccceeeeeccceEEEeeecC
Q 035827          480 LDFDVLAGIAVHKKNYLFLLAKDHE  504 (507)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~v~~~~r~  504 (507)
                      +++   ..++..|.+++.|+.+.|.
T Consensus       464 ~d~---s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  464 VDY---SRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CCH---HHhhcCCCCCceEEEeecC
Confidence            343   3348899999999999874


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=5.7e-61  Score=459.08  Aligned_cols=408  Identities=17%  Similarity=0.286  Sum_probs=297.9

Q ss_pred             CCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHHhcCC-cEEEeecCccE-------EEecCHHHHHHHHHh---
Q 035827           27 KKIKLPPGPQGLPFIGNLHQFD----VSKPHVSFWELSKKYGP-LMSLRLGFVPT-------LVVSSAKMAKETLKT---   91 (507)
Q Consensus        27 ~~~~~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------v~v~dp~~i~~il~~---   91 (507)
                      .+.+.|||+.++|++|+..+|.    ..++..++.+.++|||+ ||+++++|.|.       |+++||+.++.++.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            4678899999999999987642    45668999999999999 99999998666       999999999999975   


Q ss_pred             -cCcccCCCCchhhhhhhhcCCcc---eEEcCCChhHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCC
Q 035827           92 -HDLQFSSRPALVVTQKLSYNGLD---LVFSPYGEYWREIRKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASK  167 (507)
Q Consensus        92 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  167 (507)
                       +...+..... .... +.  |.+   .+++.+|+.|+++||+ +.+.|+ ..++.+.+.|.+.++.++++|.....++.
T Consensus        94 ~~~~~~~~~~~-~~~~-l~--G~~~~~s~~~~~g~~H~r~Rrl-l~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~  167 (480)
T PLN02648         94 DKRDVFTGTYM-PSTA-FT--GGYRVLSYLDPSEPKHAKLKSF-LFELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKG  167 (480)
T ss_pred             cccccceeeec-cCcc-cc--CCceeeeecCCCCchHHHHHHH-HHHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCC
Confidence             3332322111 1112 22  433   5667789999999999 568888 46788999999999999999965434456


Q ss_pred             cccHHHHHHHHHHHHHHHHhhCCCCCCCCcchhHHHHHHHHHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHh
Q 035827          168 QVNLSEIMMSLSCNIICRLGFGKRSGDESETITERSRFHTLLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQE  247 (507)
Q Consensus       168 ~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~  247 (507)
                      ++|+.+.++.+++|++++++||.+.+...    ..+.+......+...       ..+|....                .
T Consensus       168 ~vdv~~~~~~lt~~vi~~~lfG~~~~~~~----l~~~~~~~~~~~~~~-------~~~p~~~~----------------~  220 (480)
T PLN02648        168 KAEFNDPLDQMAFNFLCKALTGKDPSETA----LGSDGPALIQKWLAL-------QLAPLAST----------------G  220 (480)
T ss_pred             CccccchHHHHHHHHHHHHHcCCCcchhh----hccchhHHHHHHHHH-------HhhHHHHc----------------C
Confidence            79999999999999999999998665310    111121222111110       00111000                0


Q ss_pred             hHHHHHHHHHhhcccc----ccc-c--ccccchHHHHHHHhhhhcCCcccCCHHHHHHHHHH-HHHhcccchHHHHHHHH
Q 035827          248 SDRFYQELIDEHLDPK----RTK-A--KVQQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMN-IFVAGTDTSAATLVWAM  319 (507)
Q Consensus       248 ~~~~~~~~i~~~~~~~----~~~-~--~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~Ag~~tt~~~l~~~l  319 (507)
                      +...++..+.++....    ... .  ...-.+.++.+++...+.    +++++|++++++. +.+++++||+++++|++
T Consensus       221 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l  296 (480)
T PLN02648        221 LPHVLEELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEKF----GISREEALHNLLFVLGFNAFGGFKIFFPALL  296 (480)
T ss_pred             chHHHHHHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            0111111111110000    000 0  000011223444433332    4999999999875 45677888889999999


Q ss_pred             HHHHhCch-HHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhcCCCCCCcccccccccCcccc----ccccCCC
Q 035827          320 TYLMKHPR-VMKKVQEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMRLQPPVPLLVPKETIEKCTID----GYEIPAK  394 (507)
Q Consensus       320 ~~L~~~P~-~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~----g~~ip~g  394 (507)
                      ++|++||+ +|++|++|++++++..++.++++++.+||||++||+|++|++|+++.. .|++.+|++++    ||.||||
T Consensus       297 ~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG  375 (480)
T PLN02648        297 KWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAFEIKKG  375 (480)
T ss_pred             HHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceEEECCC
Confidence            99999995 999999999999864335789999999999999999999999999985 47789999996    7999999


Q ss_pred             CEEEEehhhhcCCCCCCCCCCCCCCCccccCCcCccCCCcccccc---------CCCCCCCCCchhHHHHHHHHHHHhHh
Q 035827          395 TLVYVNAWAIGRDPEAWENPEEFNPERFIDRSIDFKGQNFELIPF---------GAGRRICPGMHLGTANVELALANLLY  465 (507)
Q Consensus       395 ~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~pF---------g~G~r~C~G~~~A~~e~~~~l~~l~~  465 (507)
                      +.|.++.+.+||||++|+||++|||+||++++..   ....+++|         |+|+|.|+|++||++|++++++.|++
T Consensus       376 ~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~  452 (480)
T PLN02648        376 EMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFL  452 (480)
T ss_pred             CEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999864321   11233444         67789999999999999999999999


Q ss_pred             cce-eecCCCC
Q 035827          466 KFD-WEMPPGM  475 (507)
Q Consensus       466 ~f~-~~~~~~~  475 (507)
                      +|+ |++.++.
T Consensus       453 ~f~~~~l~~~~  463 (480)
T PLN02648        453 RYDSFEIEVDT  463 (480)
T ss_pred             HhCEEeecCCc
Confidence            998 9987764


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.6e-56  Score=421.52  Aligned_cols=383  Identities=27%  Similarity=0.421  Sum_probs=303.3

Q ss_pred             CchhHHHHHHhcCCcEEEeecCcc--EEEecCHHHHHHHHHhcCcccCCCCchhhhh--hhhcCCcceEEcCCChhHHHH
Q 035827           52 PHVSFWELSKKYGPLMSLRLGFVP--TLVVSSAKMAKETLKTHDLQFSSRPALVVTQ--KLSYNGLDLVFSPYGEYWREI  127 (507)
Q Consensus        52 ~~~~~~~~~~~yG~v~~~~~~~~~--~v~v~dp~~i~~il~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  127 (507)
                      +......+.+.||.++.+...+..  +++++++++++++++++. .+++........  .....|...+++.+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            344556788889988888876654  899999999999999874 222222111110  111124444667789999999


Q ss_pred             HHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHhhhcCCcccHHHHHHHHHHHHHHHHhhCCCCCCCCcchhHHHHHHH
Q 035827          128 RKICVIHLFNSNRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEIMMSLSCNIICRLGFGKRSGDESETITERSRFHT  207 (507)
Q Consensus       128 Rk~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  207 (507)
                      ||+ +.+.|+++.++.+.+.+.+.++.+++.+ .  .+ ...++.+.+..+++++|+ .+||.+.+.       ...+..
T Consensus       103 Rkl-~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~-------~~~~~~  169 (411)
T COG2124         103 RKL-LAPAFTPRALRGYRPLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLED-------RPQLLR  169 (411)
T ss_pred             HHH-hccccCHHHHHHHHHHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHH-------HHHHHH
Confidence            999 7899999999999999999999999998 3  22 678899999999999999 889988763       222222


Q ss_pred             HHHHHHHhccccccccccchhhhhhhhhhHHHHHHHHHHhhHHHHHHHHHhhccccccccccccchHHHHHHHhhhhcCC
Q 035827          208 LLNEIQALSIGFFVTDYFPFMGWIDKLTGMIRRLENNFQESDRFYQELIDEHLDPKRTKAKVQQEDLVDVLLQIRKDHGF  287 (507)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  287 (507)
                      ........   ..     |....    .....+..++..++.++++.+|++++..       ..+|+++.|+.+.++++ 
T Consensus       170 ~~~~~~~~---~~-----~~~~~----~~~~~~~~~a~~~~~~~~~~li~~rR~~-------~~~dlls~l~~a~~~~~-  229 (411)
T COG2124         170 WSDALLLR---LD-----PDLGP----EEPWRRARAARRELDAYLRALIAERRAA-------PRDDLLSLLLSAEDDGG-  229 (411)
T ss_pred             HHHHHHhc---cC-----cccCC----cccHHHHHHHHHHHHHHHHHHHHHhccC-------CcccHHHHHHHHhhCCC-
Confidence            22211111   00     11110    1234566778889999999999998832       77899999998887754 


Q ss_pred             cccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHHHhc
Q 035827          288 KVDLTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVGGKKSFVDEDDVQELHYHKAVVKETMR  367 (507)
Q Consensus       288 ~~~l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  367 (507)
                       ..+|++||+++++++++||||||+++|+|+++.|++||++++++++|.+.                 ||++++|+|+||
T Consensus       230 -~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-----------------~~~~~~v~E~LR  291 (411)
T COG2124         230 -GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-----------------PLLEAVVEETLR  291 (411)
T ss_pred             -CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-----------------HHHHHHHHHHHH
Confidence             25999999999999999999999999999999999999999999999764                 889999999999


Q ss_pred             CCCCCCcccccccccCccccccccCCCCEEEEehhhhcCCCCCCCCCCCCCCCccccCCcCccCCCccccccCCCCCCCC
Q 035827          368 LQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSIDFKGQNFELIPFGAGRRICP  447 (507)
Q Consensus       368 l~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~  447 (507)
                      ++||++. .+|.+.+|++++|+.||+|+.|.++++++||||++|++|++|||+||.          ..++|||+|+|.|+
T Consensus       292 ~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~Cl  360 (411)
T COG2124         292 LYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCL  360 (411)
T ss_pred             hCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCcccc
Confidence            9999999 889999999999999999999999999999999999999999999986          46899999999999


Q ss_pred             CchhHHHHHHHHHHHhHhcceeecCCCCCCCCCCcccccceeeeeccceEEEeeec
Q 035827          448 GMHLGTANVELALANLLYKFDWEMPPGMKNQDLDFDVLAGIAVHKKNYLFLLAKDH  503 (507)
Q Consensus       448 G~~~A~~e~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  503 (507)
                      |+.||++|++++++.++++|++....+ . .  ..  ....+..+..+..+.++.+
T Consensus       361 G~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~--~~--~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         361 GAALARLELKVALAELLRRFPLLLLAE-P-P--PL--VRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CHHHHHHHHHHHHHHHHHhCchhhcCC-C-C--Cc--cccccccCCCcceeeeecC
Confidence            999999999999999999999877654 1 1  11  2233344555556655543


No 33 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=75.59  E-value=3.6  Score=32.10  Aligned_cols=15  Identities=0%  Similarity=-0.086  Sum_probs=5.6

Q ss_pred             HhhccccCCCCCCCC
Q 035827           19 FSVNTYQQKKIKLPP   33 (507)
Q Consensus        19 ~~~~~~~~~~~~~~p   33 (507)
                      +..+++++++.....
T Consensus        21 ~~~rRR~r~G~~P~~   35 (130)
T PF12273_consen   21 CHNRRRRRRGLQPIY   35 (130)
T ss_pred             HHHHHHhhcCCCCcC
Confidence            333333333343333


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=65.79  E-value=1.2  Score=37.27  Aligned_cols=43  Identities=26%  Similarity=0.254  Sum_probs=32.2

Q ss_pred             chhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEE
Q 035827          355 LHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYV  399 (507)
Q Consensus       355 lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~  399 (507)
                      -....|||.|+.-...-.-..  =+..+|+.++|..||+||.++.
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            345678889988776544332  2467999999999999998876


No 35 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=64.54  E-value=19  Score=22.18  Aligned_cols=42  Identities=12%  Similarity=0.234  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHH
Q 035827          295 HIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEI  336 (507)
Q Consensus       295 ~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei  336 (507)
                      ++..++..++-.|-|..+-.+.-.+.+.--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            466677777777888877777777777778899888887776


No 36 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=53.90  E-value=22  Score=24.85  Aligned_cols=6  Identities=50%  Similarity=0.672  Sum_probs=3.6

Q ss_pred             CCcccc
Q 035827           37 GLPFIG   42 (507)
Q Consensus        37 ~~p~~G   42 (507)
                      .-|++|
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            356666


No 37 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=47.56  E-value=1e+02  Score=21.95  Aligned_cols=51  Identities=12%  Similarity=0.155  Sum_probs=43.5

Q ss_pred             CCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHhhC
Q 035827          291 LTLDHIKAVLMNIFVAGTDTSAATLVWAMTYLMKHPRVMKKVQEEIRSLVG  341 (507)
Q Consensus       291 l~~~~i~~~~~~~~~Ag~~tt~~~l~~~l~~L~~~P~~q~~lr~Ei~~~~~  341 (507)
                      .+.+.........++--+..++....-.+...++||+...+|.+.+.+-+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            445566667778889999999999999999999999999999999987653


No 38 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=45.52  E-value=21  Score=22.91  Aligned_cols=26  Identities=35%  Similarity=0.627  Sum_probs=20.3

Q ss_pred             HHHHHHHHhCchHHHHHHHHHHHhhC
Q 035827          316 VWAMTYLMKHPRVMKKVQEEIRSLVG  341 (507)
Q Consensus       316 ~~~l~~L~~~P~~q~~lr~Ei~~~~~  341 (507)
                      .-++.+|.+||++.+++.+.-.+.+|
T Consensus         3 Q~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    3 QEIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHHChHHHHHHHcCCeeEec
Confidence            34678999999999999886555543


No 39 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=41.87  E-value=9.9  Score=27.65  Aligned_cols=18  Identities=33%  Similarity=0.469  Sum_probs=15.0

Q ss_pred             CCccccccCCCCCCCCCc
Q 035827          432 QNFELIPFGAGRRICPGM  449 (507)
Q Consensus       432 ~~~~~~pFg~G~r~C~G~  449 (507)
                      ..++.+|||.|.-.|+|.
T Consensus       103 ~gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAA  120 (131)
T ss_pred             cCcccCCcCccHHHHHHH
Confidence            445789999999999874


No 40 
>PRK06789 flagellar motor switch protein; Validated
Probab=40.31  E-value=22  Score=24.32  Aligned_cols=41  Identities=10%  Similarity=0.174  Sum_probs=32.3

Q ss_pred             HHHHHhcCCCCCCcccccccccCcc--ccccccCCCCEEEEeh
Q 035827          361 VVKETMRLQPPVPLLVPKETIEKCT--IDGYEIPAKTLVYVNA  401 (507)
Q Consensus       361 ~i~E~lRl~p~~~~~~~r~~~~~~~--~~g~~ip~g~~v~~~~  401 (507)
                      -++|.+.|.+-.-..+-|.+.+++.  ++|..|.+|.+|.++-
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            4789999998877667777777654  5999999999988753


No 41 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=37.84  E-value=1.2e+02  Score=22.35  Aligned_cols=61  Identities=26%  Similarity=0.397  Sum_probs=41.5

Q ss_pred             CCCCCCCCCCCcccccccCCCCCCCchhHHHHHHhcCCcEEEeecCc------cEEEecCHHHHHHHHHh
Q 035827           28 KIKLPPGPQGLPFIGNLHQFDVSKPHVSFWELSKKYGPLMSLRLGFV------PTLVVSSAKMAKETLKT   91 (507)
Q Consensus        28 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~------~~v~v~dp~~i~~il~~   91 (507)
                      +.+.||-...+-++.|++.-   =..+-+-++.-+||+|..+.+|..      .+||-.|-.+++....+
T Consensus        10 ~~rlppevnriLyirNLp~~---ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   10 NIRLPPEVNRILYIRNLPFK---ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCCChhhheeEEEecCCcc---ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            45566666667777776432   224567789999999999998753      45777776666666543


No 42 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=34.40  E-value=29  Score=23.05  Aligned_cols=16  Identities=19%  Similarity=0.505  Sum_probs=13.4

Q ss_pred             cchhHHHHHHHHhcCC
Q 035827          354 ELHYHKAVVKETMRLQ  369 (507)
Q Consensus       354 ~lp~l~a~i~E~lRl~  369 (507)
                      +..+++.+|+|++|+.
T Consensus        39 r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   39 RKQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            4567899999999974


No 43 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=34.11  E-value=34  Score=26.47  Aligned_cols=24  Identities=13%  Similarity=0.290  Sum_probs=17.2

Q ss_pred             CCCCCchhHHHHHHHHHHHhHhcc
Q 035827          444 RICPGMHLGTANVELALANLLYKF  467 (507)
Q Consensus       444 r~C~G~~~A~~e~~~~l~~l~~~f  467 (507)
                      .+|.|+.||+..+-.++..|+..=
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            579999999999999999998753


No 44 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=33.61  E-value=10  Score=35.77  Aligned_cols=44  Identities=20%  Similarity=0.201  Sum_probs=32.2

Q ss_pred             chhHHHHHHHHhcCCCCCCcccccccccCccccccccCCCCEEEEe
Q 035827          355 LHYHKAVVKETMRLQPPVPLLVPKETIEKCTIDGYEIPAKTLVYVN  400 (507)
Q Consensus       355 lp~l~a~i~E~lRl~p~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~  400 (507)
                      -....|||.|+.-+.--.-..  =+..+|+.++|..||+||.|+..
T Consensus       255 ~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEEE
Confidence            345678888888777544322  24669999999999999987654


No 45 
>PF15206 FAM209:  FAM209 family
Probab=33.36  E-value=42  Score=25.93  Aligned_cols=36  Identities=22%  Similarity=0.402  Sum_probs=21.4

Q ss_pred             HHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCccc
Q 035827            6 IIILLSLPICLFLFSVNTYQQKKIKLPPGPQGLPFI   41 (507)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~   41 (507)
                      +.+++++++++++.+..-.-+.+...|||..+.|+-
T Consensus        42 lWL~Fvv~lyvilKf~g~~~K~keq~p~glrg~~fr   77 (150)
T PF15206_consen   42 LWLLFVVVLYVILKFRGDSEKNKEQSPPGLRGCSFR   77 (150)
T ss_pred             HHHHHHHHHHheeEeccCcccccccCCCccCcccCC
Confidence            444555555544444444445567788888887764


No 46 
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=32.85  E-value=1.4e+02  Score=21.56  Aligned_cols=39  Identities=13%  Similarity=0.216  Sum_probs=30.9

Q ss_pred             ccchHHHHHHHhhhhcCCcccCCHHHHHHHHHHHHHhccc
Q 035827          270 QQEDLVDVLLQIRKDHGFKVDLTLDHIKAVLMNIFVAGTD  309 (507)
Q Consensus       270 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~  309 (507)
                      .+++.++.+++..+.++ +..++.+|....+..+.+|.++
T Consensus        45 ~d~~~vd~im~~LD~n~-Dg~vdF~EF~~Lv~~l~~ac~~   83 (91)
T cd05024          45 NDPMAVDKIMKDLDDCR-DGKVGFQSFFSLIAGLLIACND   83 (91)
T ss_pred             CCHHHHHHHHHHhCCCC-CCcCcHHHHHHHHHHHHHHHHH
Confidence            46678899998877654 4579999999888888888775


No 47 
>PHA03049 IMV membrane protein; Provisional
Probab=32.67  E-value=1e+02  Score=20.38  Aligned_cols=25  Identities=8%  Similarity=0.288  Sum_probs=9.9

Q ss_pred             HHHhhccccCCCCCCCCCCCCCccc
Q 035827           17 FLFSVNTYQQKKIKLPPGPQGLPFI   41 (507)
Q Consensus        17 ~~~~~~~~~~~~~~~~pgp~~~p~~   41 (507)
                      +++-...+.......||.|--.+..
T Consensus        18 IvYgiYnkk~~~q~~~p~~e~ye~~   42 (68)
T PHA03049         18 IVYGIYNKKTTTSQNPPSQEKYEKM   42 (68)
T ss_pred             HHHHHHhcccccCCCCCChhhccCc
Confidence            3333333333344444444434433


No 48 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=32.40  E-value=75  Score=18.46  Aligned_cols=12  Identities=17%  Similarity=0.675  Sum_probs=9.5

Q ss_pred             HhCchHHHHHHH
Q 035827          323 MKHPRVMKKVQE  334 (507)
Q Consensus       323 ~~~P~~q~~lr~  334 (507)
                      .+|||+++.+++
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            379999888775


No 49 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=30.21  E-value=1.6e+02  Score=20.96  Aligned_cols=17  Identities=18%  Similarity=0.556  Sum_probs=15.3

Q ss_pred             CchHHHHHHHHHHHhhC
Q 035827          325 HPRVMKKVQEEIRSLVG  341 (507)
Q Consensus       325 ~P~~q~~lr~Ei~~~~~  341 (507)
                      -|++.+.+|+||.+++.
T Consensus        35 ~pd~l~~Lr~eIl~VI~   51 (88)
T COG0851          35 QPDYLEQLRKEILEVIS   51 (88)
T ss_pred             CcchHHHHHHHHHHHHH
Confidence            39999999999999985


No 50 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=29.55  E-value=26  Score=27.26  Aligned_cols=26  Identities=4%  Similarity=0.225  Sum_probs=12.7

Q ss_pred             HHHHHHHHHHHHHHHhhccccCCCCC
Q 035827            5 VIIILLSLPICLFLFSVNTYQQKKIK   30 (507)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~   30 (507)
                      +.++++++++++++++.+..++.+++
T Consensus         4 l~~iii~~i~l~~~~~~~~~rRR~r~   29 (130)
T PF12273_consen    4 LFAIIIVAILLFLFLFYCHNRRRRRR   29 (130)
T ss_pred             eHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            33444444445555555555554443


No 51 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=29.20  E-value=37  Score=22.06  Aligned_cols=7  Identities=43%  Similarity=1.132  Sum_probs=5.5

Q ss_pred             CCCcccc
Q 035827          418 NPERFID  424 (507)
Q Consensus       418 ~P~R~~~  424 (507)
                      ||||||+
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7888886


No 52 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=29.15  E-value=49  Score=25.35  Aligned_cols=14  Identities=21%  Similarity=0.477  Sum_probs=5.1

Q ss_pred             HHHHHHhhccccCC
Q 035827           14 ICLFLFSVNTYQQK   27 (507)
Q Consensus        14 ~~~~~~~~~~~~~~   27 (507)
                      ++++.|+.+|++++
T Consensus        81 Illi~y~irR~~Kk   94 (122)
T PF01102_consen   81 ILLISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHHHHS--
T ss_pred             HHHHHHHHHHHhcc
Confidence            33344444444443


No 53 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=28.85  E-value=1.5e+02  Score=20.83  Aligned_cols=37  Identities=16%  Similarity=0.108  Sum_probs=28.1

Q ss_pred             hhHHHHHHhcCCc---EEEeecCccEEEecC-----HHHHHHHHH
Q 035827           54 VSFWELSKKYGPL---MSLRLGFVPTLVVSS-----AKMAKETLK   90 (507)
Q Consensus        54 ~~~~~~~~~yG~v---~~~~~~~~~~v~v~d-----p~~i~~il~   90 (507)
                      +..++++++|.++   +++..++.+.+.|++     .+.+.+|+.
T Consensus        24 EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq   68 (81)
T PRK10597         24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ   68 (81)
T ss_pred             HHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence            4556788899987   999999988888754     366666665


No 54 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=28.66  E-value=26  Score=21.99  Aligned_cols=11  Identities=45%  Similarity=0.918  Sum_probs=9.1

Q ss_pred             cccCCCCCCCC
Q 035827          437 IPFGAGRRICP  447 (507)
Q Consensus       437 ~pFg~G~r~C~  447 (507)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999984


No 55 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=25.95  E-value=1.1e+02  Score=27.82  Aligned_cols=69  Identities=17%  Similarity=0.311  Sum_probs=42.2

Q ss_pred             HHHHHHHhcCCCCCCcc---cccccccCccc---c-ccccCCCCEEEEehhhhcCCCCCCCCCCCCCCCccccCCcCccC
Q 035827          359 KAVVKETMRLQPPVPLL---VPKETIEKCTI---D-GYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSIDFKG  431 (507)
Q Consensus       359 ~a~i~E~lRl~p~~~~~---~~r~~~~~~~~---~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~  431 (507)
                      +.+++.+..+.||.-.+   +--..+.|..+   + .-.|.+||.|.++-                              
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~G------------------------------  325 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMGG------------------------------  325 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccCC------------------------------
Confidence            67899999999987432   22222233222   1 24678888666541                              


Q ss_pred             CCccccccCCCCCCCCCchhHHHHHHHHH
Q 035827          432 QNFELIPFGAGRRICPGMHLGTANVELAL  460 (507)
Q Consensus       432 ~~~~~~pFg~G~r~C~G~~~A~~e~~~~l  460 (507)
                      ++++++-||  .-+-.|+++|. |+|.++
T Consensus       326 spYs~l~~~--~pms~GrRIA~-EIk~A~  351 (361)
T COG1759         326 SPYSNLYWG--EPMSTGRRIAR-EIKEAI  351 (361)
T ss_pred             CcchhhhcC--CCcchhhHHHH-HHHHHH
Confidence            344555554  34668999998 888765


No 56 
>PF13260 DUF4051:  Protein of unknown function (DUF4051)
Probab=25.85  E-value=97  Score=18.79  Aligned_cols=20  Identities=20%  Similarity=0.178  Sum_probs=10.4

Q ss_pred             CchHHHHHHHHHHHHHHHHh
Q 035827            1 MDLLVIIILLSLPICLFLFS   20 (507)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~   20 (507)
                      |.+++.+++++++++...+.
T Consensus         1 mfiawywivli~lv~~gy~~   20 (54)
T PF13260_consen    1 MFIAWYWIVLIVLVVVGYFC   20 (54)
T ss_pred             ChHHHHHHHHHHHHHHHHHH
Confidence            45566555555555444433


No 57 
>KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.44  E-value=39  Score=33.43  Aligned_cols=28  Identities=25%  Similarity=0.379  Sum_probs=15.1

Q ss_pred             CCCccccCCcCccCCCccccccCCCCCCCCCch
Q 035827          418 NPERFIDRSIDFKGQNFELIPFGAGRRICPGMH  450 (507)
Q Consensus       418 ~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~  450 (507)
                      |||||++-.     .++.|-|=..|.|.-+|+.
T Consensus       582 DPERWLP~r-----eRS~yr~KrK~k~~~~~kg  609 (652)
T KOG2376|consen  582 DPERWLPRR-----ERSTYRPKRKGKRAAIIKG  609 (652)
T ss_pred             Chhhcccch-----hccccCcccccchhhhhcc
Confidence            466666532     3344555556766555443


No 58 
>PHA03162 hypothetical protein; Provisional
Probab=24.26  E-value=76  Score=24.35  Aligned_cols=24  Identities=21%  Similarity=0.491  Sum_probs=19.0

Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHh
Q 035827          440 GAGRRICPGMHLGTANVELALANL  463 (507)
Q Consensus       440 g~G~r~C~G~~~A~~e~~~~l~~l  463 (507)
                      ++|.+.|||+...+-|+-.=|++|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999998888776666554


No 59 
>PRK15321 putative type III secretion system effector protein OrgC; Provisional
Probab=24.10  E-value=1.2e+02  Score=21.80  Aligned_cols=44  Identities=2%  Similarity=0.008  Sum_probs=27.7

Q ss_pred             HHhCchHHHHHHHHHHHhhCCCCCCCChhhhc-cchhHHHHHHHH
Q 035827          322 LMKHPRVMKKVQEEIRSLVGGKKSFVDEDDVQ-ELHYHKAVVKET  365 (507)
Q Consensus       322 L~~~P~~q~~lr~Ei~~~~~~~~~~~~~~~~~-~lp~l~a~i~E~  365 (507)
                      |+..|...+.|++|+.+.-.+.++.+.+-.+. ++..++..++|.
T Consensus        32 la~S~~~KD~I~q~m~~F~dp~~G~pAF~s~~QQ~~mlq~~l~k~   76 (120)
T PRK15321         32 SASSETLKDSIYQEMNAFKDPNSGDSAFVSFEQQTAMLQNMLAKV   76 (120)
T ss_pred             ccCcHHHHHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHHHHhc
Confidence            44556666788888887654444556655544 466677776664


No 60 
>PF06024 DUF912:  Nucleopolyhedrovirus protein of unknown function (DUF912);  InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=23.43  E-value=96  Score=22.87  Aligned_cols=28  Identities=25%  Similarity=0.468  Sum_probs=16.6

Q ss_pred             chHHHHHHHHHHHHHHHHhhccccCCCC
Q 035827            2 DLLVIIILLSLPICLFLFSVNTYQQKKI   29 (507)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~   29 (507)
                      .++..+++++++.+++++...|.+++..
T Consensus        67 ~lls~v~IlVily~IyYFVILRer~~~~   94 (101)
T PF06024_consen   67 SLLSFVCILVILYAIYYFVILRERQKSI   94 (101)
T ss_pred             HHHHHHHHHHHHhhheEEEEEecccccc
Confidence            3455566666666666666666555543


No 61 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=22.68  E-value=1.3e+02  Score=22.44  Aligned_cols=10  Identities=40%  Similarity=0.514  Sum_probs=5.2

Q ss_pred             CCcccccccC
Q 035827           37 GLPFIGNLHQ   46 (507)
Q Consensus        37 ~~p~~G~~~~   46 (507)
                      .-|+-||+..
T Consensus        45 ~~p~YgNL~~   54 (107)
T PF15330_consen   45 DDPCYGNLEL   54 (107)
T ss_pred             CCcccccccc
Confidence            3555666543


No 62 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=22.57  E-value=2.2e+02  Score=19.94  Aligned_cols=22  Identities=23%  Similarity=0.377  Sum_probs=10.6

Q ss_pred             HHHHHHHHHHHHHHhhccccCC
Q 035827            6 IIILLSLPICLFLFSVNTYQQK   27 (507)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~   27 (507)
                      ++++++++++++.++.......
T Consensus        30 ILivLVIIiLlImlfqsSS~~~   51 (85)
T PF10717_consen   30 ILIVLVIIILLIMLFQSSSNGN   51 (85)
T ss_pred             HHHHHHHHHHHHHHHhccCCCC
Confidence            3444444455555555554443


No 63 
>KOG3262 consensus H/ACA small nucleolar RNP component GAR1 [Translation, ribosomal structure and biogenesis]
Probab=22.10  E-value=57  Score=26.69  Aligned_cols=36  Identities=17%  Similarity=0.446  Sum_probs=26.7

Q ss_pred             cccCCCCEEEEehhhhcCCCCCCCCCCCCCC-CccccCC
Q 035827          389 YEIPAKTLVYVNAWAIGRDPEAWENPEEFNP-ERFIDRS  426 (507)
Q Consensus       389 ~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P-~R~~~~~  426 (507)
                      +.|....-|.++.+.-  .+++|-+|+++.| +|||+..
T Consensus       106 fsIK~~dgv~assfk~--g~k~fi~p~KllPl~RFLP~p  142 (215)
T KOG3262|consen  106 FSIKPSDGVQASSFKP--GDKLFIDPDKLLPLDRFLPQP  142 (215)
T ss_pred             EEEecCCCceeecccC--CCeEEecccccCcHhhcCCCC
Confidence            4677776666665443  5678899999999 8999754


No 64 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=21.72  E-value=1.9e+02  Score=22.41  Aligned_cols=39  Identities=15%  Similarity=0.147  Sum_probs=29.4

Q ss_pred             CchhHHHHHHhcCCcEEEeecCccEEEecCHHHHHHHHHhc
Q 035827           52 PHVSFWELSKKYGPLMSLRLGFVPTLVVSSAKMAKETLKTH   92 (507)
Q Consensus        52 ~~~~~~~~~~~yG~v~~~~~~~~~~v~v~dp~~i~~il~~~   92 (507)
                      ....+.+|.++||.+-..  .+...+...|++.++++...+
T Consensus        76 v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            345788999999985442  245677788999999998764


No 65 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=21.33  E-value=28  Score=28.24  Aligned_cols=37  Identities=24%  Similarity=0.530  Sum_probs=26.4

Q ss_pred             CCCCCCccccCCcCccCCCccccccCCCCCCCCCchh
Q 035827          415 EEFNPERFIDRSIDFKGQNFELIPFGAGRRICPGMHL  451 (507)
Q Consensus       415 ~~F~P~R~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~  451 (507)
                      .+|+|++|-.==.+...+..+.+=|..|+-.|-|..=
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaKs   71 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAKS   71 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccCc
Confidence            3788999854212223355688999999999999763


No 66 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=21.25  E-value=86  Score=17.27  Aligned_cols=17  Identities=24%  Similarity=0.583  Sum_probs=13.6

Q ss_pred             CCCccccccCCCCCCCC
Q 035827          431 GQNFELIPFGAGRRICP  447 (507)
Q Consensus       431 ~~~~~~~pFg~G~r~C~  447 (507)
                      .....|+|+++..|.|.
T Consensus        15 p~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   15 PRDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCCcEeCCCCccccCc
Confidence            34568999999889984


Done!